RPSBLAST alignment for GI: 254780869 and conserved domain: KOG1137

>gnl|CDD|36352 KOG1137, KOG1137, KOG1137, mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) [RNA processing and modification]. Length = 668

 Score = 78.9 bits (194), Expect = 3e-15
 Identities = 97/499 (19%), Positives = 167/499 (33%), Gaps = 50/499 (10%)

Query: 8   FLPLGGVGEIGMNMALYGYGSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKN 67
           F P    G +                  ++  G    ++D   +    P     +   ++
Sbjct: 153 FWPYH-AGHVLGACMFMV----EIAGVRLLYTGDYSREEDRHLIAAEMPPTGPDVLITES 207

Query: 68  LMAIFITHAHEDHYGAL----HDL---WSFLHVPVYASPFAIGLLEAKRVYERV---SKK 117
              + I    E+  G L    H        + +PV+A   A  LL     Y       + 
Sbjct: 208 TYGVQIHEPREEREGRLTWVIHSTVPRGGRVLIPVFALGRAQELLLILDEYWGNHVDLRD 267

Query: 118 IPCISFQAGDKVDVGAFSIESVRVNHSIPETMALVIRSPV----GNIVHTGDWKLDDDAI 173
           IP     +  K  +G F      +N  I +  AL  R+P      +I+ TGDW  D+   
Sbjct: 268 IPIYYASSLAKKCMGVFQTYVNMMNDRIRKQSAL--RNPFIFKHVSILRTGDWFDDEGPS 325

Query: 174 LGDVTDKDSLCAIGNEGILALMCDSTNA-MREGTCISEKGIK------KNIYDIMKNAKG 226
           +   +       +  E       DS NA +  G C+     K      K I   M   K 
Sbjct: 326 VVMASPGMLQSGLSRELFERWCSDSKNAVLIPGYCVEGTLAKDILSEPKEI-MAMNGRKL 384

Query: 227 ----CVLVTTFSSSVSRIRSIIDIAEQIGRKIVLLG------SSLKRVVSVAIDVGIIKK 276
                V   +F++ V  +++   IA+     ++L+         LK  +  A   G +  
Sbjct: 385 PLRMQVEYISFAAHVDYLQNSEFIADITPPHLILVHGEANEMMRLKSALEAAFRDGKVPI 444

Query: 277 DQLFLSD-ESFGLYPREQLIVIATGSQGE----PRSALAQLSRGEMRNVKLAEKDTVIFS 331
           D     + E   LY   + +   TGS  E     R +   +S G    + L+ +D +++S
Sbjct: 445 DVSTPRNCEDVELYFPGEKLAKTTGSLAEVPKEDRVSGILVSYGFSYAI-LSPEDLILYS 503

Query: 332 S-RAIPGNEVAIGHIKNRLVEQGVRVIAEDAECPVHVSGHPYPNDLKRMYQWIRPQVLVA 390
             + IP NE  +     R+   G  +I    E  +  S          +      +    
Sbjct: 504 DLKTIPLNERQVIPYMGRIALIGPNLIQGKNEM-LETSKKHAYRVELVIKVVKPQEFP-- 560

Query: 391 IHGEPLHLVAHKELALQEGIACVPPVRNGKMLRLFPDPIEIIDEV-VHGLFLKDGFLIGK 449
           I  E L    +  LA   G   +    + K ++L  D  + ++   +    LK+ F   K
Sbjct: 561 IVLEWLSNPENDMLADSIGARILTVSLSPKSVKLMVDKCDEVERKKLLESLLKNQFGDDK 620

Query: 450 FADLGIAKRRQLSFVGHLS 468
             + GI        V  +S
Sbjct: 621 TNEYGILVMEVDGMVARIS 639