HHsearch alignment for GI: 254780870 and conserved domain: COG0442
>COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=99.52 E-value=3.2e-14 Score=109.32 Aligned_cols=166 Identities=17% Similarity=0.247 Sum_probs=133.6
Q ss_pred EEEECCCEEECCCCCCCCC-EEEEECCC-CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHCCCCCEEEECCCC
Q ss_conf 1111581442231122301-15896477-772323366634474300233221023211111363320321102421788
Q gi|254780870|r 280 RGIEVGHIFYFGTKYSLPM-SATFKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 (449)
Q Consensus 280 ~~ie~~~~f~lG~~ys~~~-~~~~~~~~-g~~~~~~~g~~giG~~R~~~alle~~~d~~g~~wP~~iaP~~v~Iipi~~~ 357 (449)
T Consensus 218 ge~qi~ts~~y~aN~e~a~~~~~~~~~~~~~~~~v~t~s~~~-s~r~~~~~i~i~GDn~G~v~Pp~vA~~qV~~~~~~~~ 296 (500)
T COG0442 218 GEDQIATSHHYGANFEKAFIDIKFEDEEEGELEYVHTTSYGI-STRIIGAAILIHGDNEGLVLPPIVADIQVVIVPIFIK 296 (500)
T ss_pred CCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEE-EEEEEEEEEEEECCCCCCCCCCHHCCCEEEEEECCCC
T ss_conf 854799806266668774467775566655414751462688-7400158999714887764875004534899751336
Q ss_pred H----HHHHHHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHCCCCEEEEECCCHHHCCEEEEEECCCCC--EEEEE
Q ss_conf 7----99999999999999986987999758-97970867878748998899986240235718999989997--87861
Q gi|254780870|r 358 D----QVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI--REDMS 430 (449)
Q Consensus 358 ~----~~~~~~A~~i~~~Lr~~Gi~v~~D~r-~~~iGkK~~~Ad~~gip~~iiiG~~el~~~~Vtir~r~tg~--q~~v~ 430 (449)
T Consensus 297 ga~~h~~~~~~~rd~~~~l~~~~~~~~~D~~~~~~~G~kl~~~e~ieVghif~lG~kyse~~~a~v~~r~g~~~~~~mg~ 376 (500)
T COG0442 297 GANEHYKVVNYGRDVAEPLEKLGIRVEGDDRSPDGPGFKLNIWEGIEVGHIFELGTKYSEAMNATVLDRDGKEQPKTMGC 376 (500)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCHHHHHCEEEEEECCCCCCCEEEEC
T ss_conf 74101334304544456654302588424568999972110210244577999874125418049992488714417870
Q ss_pred HHHHHHH-HHHHHHHCC
Q ss_conf 9999999-999987268
Q gi|254780870|r 431 LEEVINY-ASHRFSNNR 446 (449)
Q Consensus 431 l~eli~~-i~~~l~~~~ 446 (449)
T Consensus 377 ygigvsr~v~a~ieq~~ 393 (500)
T COG0442 377 YGIGVSRLVAALLEQIH 393 (500)
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 00003459999999736