HHsearch alignment for GI: 254780870 and conserved domain: PRK04173

>PRK04173 glycyl-tRNA synthetase; Provisional.
Probab=100.00  E-value=0  Score=433.40  Aligned_cols=365  Identities=22%  Similarity=0.338  Sum_probs=280.2

Q ss_pred             HHHHHCCCEECC------CCCHHCCCCHHHHHHHHHHHHHHHHHH--CCCEEEECCCCCCHHHHHHCCCCHHHHHHHCCH
Q ss_conf             213530320003------881110431699999999999999986--698897357512468987719731122221040
Q gi|254780870|r   25 LMLRTGMIHQHS------KGIYSWLPLGQKALDNVNAIIREEQNR--TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL   96 (449)
Q Consensus        25 ll~~~g~i~~~~------~G~~~~lP~G~~i~~~le~~~r~~~~~--~G~~ei~tP~l~~~eL~~~SGh~d~~~~em~~~   96 (449)
T Consensus        12 l~krRGFv~pssEIYGG~ag~~DyGPlG~~LK~Ni~~~W~~~fv~~~~~~~~id~~ii~~~~V~~ASGHv~~F~D~~v~c   91 (460)
T PRK04173         12 LAKRRGFVFPSSEIYGGLAGFWDYGPLGVELKNNIKKAWWKSFVQERPDVVGIDSPIIMPPEVWKASGHVDNFSDPLVEC   91 (460)
T ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCCCCCCEEEC
T ss_conf             99736753427300378123615585359999999999999986525877886144448987854467746567623475


Q ss_pred             HH----------------------------------------CCC------------------------CCCEECCCCCC
Q ss_conf             21----------------------------------------378------------------------62000345554
Q gi|254780870|r   97 AD----------------------------------------RND------------------------KAMIYGPTHEE  112 (449)
Q Consensus        97 ~d----------------------------------------~~~------------------------~~~~LrP~~~e  112 (449)
T Consensus        92 ~~~~~r~RaD~Lie~~~~~~~~~~~~~~l~~~i~~~~i~cP~cg~~~lt~~~~FNLMF~T~iG~~~~~~~~~YLRPETAQ  171 (460)
T PRK04173         92 KKCKKRYRADHLIEEYLGIDAEGLSNEELEELIEENNIKCPECGGENWTEVRQFNLMFKTFIGPVEDSSSLGYLRPETAQ  171 (460)
T ss_pred             CCCCCEECHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECHHHHH
T ss_conf             76783630167766653201233589999999997088799999967754431205557513556677750231604410


Q ss_pred             CCCCCHHHCCCCCC-CCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf             31011000013420-13402641465334566767543453166874042211886887999999999874111100620
Q gi|254780870|r  113 VMTDIFRSHIKSYR-NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK  191 (449)
Q Consensus       113 ~~~~i~~~~~~SYr-~LPlr~y~ig~~fR~E~rp~~GL~R~ReF~q~D~~~F~~~~e~~~~e~~~~~~~~~~i~~~lgl~  191 (449)
T Consensus       172 GiFvnFk~v~~~~r~KlPFgiaQIGKaFRNEIsPr~~lfR~REFeQmEiE~F-~~P~~~~e~~~yw~~~~~~fl~~lGi~  250 (460)
T PRK04173        172 GIFVNFKNVLRTARKKLPFGIAQIGKSFRNEITPRNFIFRTREFEQMELEFF-VKPGTDEEWFAYWIALRKNFLLDLGID  250 (460)
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             4566119999971778880431004001243065545122345555243310-586745899999999999999983998


Q ss_pred             HHHHHHCCHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCHHHHHCCCCCCCCCCCCCCCCHHHCHHHHHCCC
Q ss_conf             12233110010131133434546867701431010034776411122012100112200013632120110002330358
Q gi|254780870|r  192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL  271 (449)
Q Consensus       192 ~~~v~~~~~~ig~~~s~e~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~d~l  271 (449)
T Consensus       251 ~~~lR~r~-----h~~~----------elAHYa~~~~D~E----------~~~~~Gw~E~~Gia~RtdyDL~~-------  298 (460)
T PRK04173        251 PENLRFRE-----HLPE----------ELAHYSKATWDIE----------YKFPFGWGELEGIANRTDYDLSR-------  298 (460)
T ss_pred             HHHEEEEE-----CCCH----------HHCCCCHHHEEEE----------EECCCCEEEEEEECCCCHHHHHH-------
T ss_conf             89947863-----0613----------4200022005589----------94589828876640642102788-------


Q ss_pred             CCCCEEEEEEEECCCEEECCCCCCCCCEEEEECC-CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC---------CCCCC
Q ss_conf             7655243211115814422311223011589647-7772323366634474300233221023211---------11136
Q gi|254780870|r  272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA-DGKDHYVQMGSYGIGAMRVVAAVIESSHDGK---------GIIWP  341 (449)
Q Consensus       272 ~~~~~~~~~~ie~~~~f~lG~~ys~~~~~~~~~~-~g~~~~~~~g~~giG~~R~~~alle~~~d~~---------g~~wP  341 (449)
T Consensus       299 --------------H-----~~~Sg-~~L~~~d~~~~~k~iPhVIEpS~GvdR~~la~L~~ay~ee~~~~~e~R~vL~l~  358 (460)
T PRK04173        299 --------------H-----SKHSG-EDLSYFDQETGEKYIPYVIEPSFGLDRLFLAFLEDAYTEEELGDGDKRTVLRLP  358 (460)
T ss_pred             --------------H-----HHHCC-CCEEEEECCCCCEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
T ss_conf             --------------9-----87448-871798225585613405640467108999999876520004787505899626


Q ss_pred             HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHCCEEEEEEC
Q ss_conf             33203211024217887999999999999999869879997589797086787874899889998624023571899998
Q gi|254780870|r  342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR  421 (449)
Q Consensus       342 ~~iaP~~v~Iipi~~~~~~~~~~A~~i~~~Lr~~Gi~v~~D~r~~~iGkK~~~Ad~~gip~~iiiG~~el~~~~Vtir~r  421 (449)
T Consensus       359 p~lAPikvaVlPL~kk~-~l~~~a~~i~~~L~~~~~~~~~D~sg-sIGkRY~R~DeiGtPf~ITiD~~tled~tVTiR~R  436 (460)
T PRK04173        359 PALAPVKVAVLPLVKKD-KLSEKAREIYAELRKDGFNVDYDDSG-SIGKRYRRQDEIGTPFCVTVDFDTLEDNTVTIRDR  436 (460)
T ss_pred             CCCCCEEEEEEECCCCC-CHHHHHHHHHHHHHHCCCEEEEECCC-CHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEC
T ss_conf             64577169999655661-25899999999998779759996899-85454453102689879997688676894897835


Q ss_pred             CCCCEEEEEHHHHHHHHHHHHHH
Q ss_conf             99978786199999999999872
Q gi|254780870|r  422 LTGIREDMSLEEVINYASHRFSN  444 (449)
Q Consensus       422 ~tg~q~~v~l~eli~~i~~~l~~  444 (449)
T Consensus       437 Dt~~Q~Rv~i~~l~~~l~~~~~~  459 (460)
T PRK04173        437 DTMEQVRVKIDELEDYLAEKLKG  459 (460)
T ss_pred             CCCCEEEEEHHHHHHHHHHHHCC
T ss_conf             87534898999999999998669