HHsearch alignment for GI: 254780870 and conserved domain: PRK04173
>PRK04173 glycyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=433.40 Aligned_cols=365 Identities=22% Similarity=0.338 Sum_probs=280.2
Q ss_pred HHHHHCCCEECC------CCCHHCCCCHHHHHHHHHHHHHHHHHH--CCCEEEECCCCCCHHHHHHCCCCHHHHHHHCCH
Q ss_conf 213530320003------881110431699999999999999986--698897357512468987719731122221040
Q gi|254780870|r 25 LMLRTGMIHQHS------KGIYSWLPLGQKALDNVNAIIREEQNR--TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 (449)
Q Consensus 25 ll~~~g~i~~~~------~G~~~~lP~G~~i~~~le~~~r~~~~~--~G~~ei~tP~l~~~eL~~~SGh~d~~~~em~~~ 96 (449)
T Consensus 12 l~krRGFv~pssEIYGG~ag~~DyGPlG~~LK~Ni~~~W~~~fv~~~~~~~~id~~ii~~~~V~~ASGHv~~F~D~~v~c 91 (460)
T PRK04173 12 LAKRRGFVFPSSEIYGGLAGFWDYGPLGVELKNNIKKAWWKSFVQERPDVVGIDSPIIMPPEVWKASGHVDNFSDPLVEC 91 (460)
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCCCCCCEEEC
T ss_conf 99736753427300378123615585359999999999999986525877886144448987854467746567623475
Q ss_pred HH----------------------------------------CCC------------------------CCCEECCCCCC
Q ss_conf 21----------------------------------------378------------------------62000345554
Q gi|254780870|r 97 AD----------------------------------------RND------------------------KAMIYGPTHEE 112 (449)
Q Consensus 97 ~d----------------------------------------~~~------------------------~~~~LrP~~~e 112 (449)
T Consensus 92 ~~~~~r~RaD~Lie~~~~~~~~~~~~~~l~~~i~~~~i~cP~cg~~~lt~~~~FNLMF~T~iG~~~~~~~~~YLRPETAQ 171 (460)
T PRK04173 92 KKCKKRYRADHLIEEYLGIDAEGLSNEELEELIEENNIKCPECGGENWTEVRQFNLMFKTFIGPVEDSSSLGYLRPETAQ 171 (460)
T ss_pred CCCCCEECHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECHHHHH
T ss_conf 76783630167766653201233589999999997088799999967754431205557513556677750231604410
Q ss_pred CCCCCHHHCCCCCC-CCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 31011000013420-13402641465334566767543453166874042211886887999999999874111100620
Q gi|254780870|r 113 VMTDIFRSHIKSYR-NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 (449)
Q Consensus 113 ~~~~i~~~~~~SYr-~LPlr~y~ig~~fR~E~rp~~GL~R~ReF~q~D~~~F~~~~e~~~~e~~~~~~~~~~i~~~lgl~ 191 (449)
T Consensus 172 GiFvnFk~v~~~~r~KlPFgiaQIGKaFRNEIsPr~~lfR~REFeQmEiE~F-~~P~~~~e~~~yw~~~~~~fl~~lGi~ 250 (460)
T PRK04173 172 GIFVNFKNVLRTARKKLPFGIAQIGKSFRNEITPRNFIFRTREFEQMELEFF-VKPGTDEEWFAYWIALRKNFLLDLGID 250 (460)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 4566119999971778880431004001243065545122345555243310-586745899999999999999983998
Q ss_pred HHHHHHCCHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCHHHHHCCCCCCCCCCCCCCCCHHHCHHHHHCCC
Q ss_conf 12233110010131133434546867701431010034776411122012100112200013632120110002330358
Q gi|254780870|r 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 (449)
Q Consensus 192 ~~~v~~~~~~ig~~~s~e~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~d~l 271 (449)
T Consensus 251 ~~~lR~r~-----h~~~----------elAHYa~~~~D~E----------~~~~~Gw~E~~Gia~RtdyDL~~------- 298 (460)
T PRK04173 251 PENLRFRE-----HLPE----------ELAHYSKATWDIE----------YKFPFGWGELEGIANRTDYDLSR------- 298 (460)
T ss_pred HHHEEEEE-----CCCH----------HHCCCCHHHEEEE----------EECCCCEEEEEEECCCCHHHHHH-------
T ss_conf 89947863-----0613----------4200022005589----------94589828876640642102788-------
Q ss_pred CCCCEEEEEEEECCCEEECCCCCCCCCEEEEECC-CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC---------CCCCC
Q ss_conf 7655243211115814422311223011589647-7772323366634474300233221023211---------11136
Q gi|254780870|r 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA-DGKDHYVQMGSYGIGAMRVVAAVIESSHDGK---------GIIWP 341 (449)
Q Consensus 272 ~~~~~~~~~~ie~~~~f~lG~~ys~~~~~~~~~~-~g~~~~~~~g~~giG~~R~~~alle~~~d~~---------g~~wP 341 (449)
T Consensus 299 --------------H-----~~~Sg-~~L~~~d~~~~~k~iPhVIEpS~GvdR~~la~L~~ay~ee~~~~~e~R~vL~l~ 358 (460)
T PRK04173 299 --------------H-----SKHSG-EDLSYFDQETGEKYIPYVIEPSFGLDRLFLAFLEDAYTEEELGDGDKRTVLRLP 358 (460)
T ss_pred --------------H-----HHHCC-CCEEEEECCCCCEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
T ss_conf --------------9-----87448-871798225585613405640467108999999876520004787505899626
Q ss_pred HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHCCEEEEEEC
Q ss_conf 33203211024217887999999999999999869879997589797086787874899889998624023571899998
Q gi|254780870|r 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 (449)
Q Consensus 342 ~~iaP~~v~Iipi~~~~~~~~~~A~~i~~~Lr~~Gi~v~~D~r~~~iGkK~~~Ad~~gip~~iiiG~~el~~~~Vtir~r 421 (449)
T Consensus 359 p~lAPikvaVlPL~kk~-~l~~~a~~i~~~L~~~~~~~~~D~sg-sIGkRY~R~DeiGtPf~ITiD~~tled~tVTiR~R 436 (460)
T PRK04173 359 PALAPVKVAVLPLVKKD-KLSEKAREIYAELRKDGFNVDYDDSG-SIGKRYRRQDEIGTPFCVTVDFDTLEDNTVTIRDR 436 (460)
T ss_pred CCCCCEEEEEEECCCCC-CHHHHHHHHHHHHHHCCCEEEEECCC-CHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEC
T ss_conf 64577169999655661-25899999999998779759996899-85454453102689879997688676894897835
Q ss_pred CCCCEEEEEHHHHHHHHHHHHHH
Q ss_conf 99978786199999999999872
Q gi|254780870|r 422 LTGIREDMSLEEVINYASHRFSN 444 (449)
Q Consensus 422 ~tg~q~~v~l~eli~~i~~~l~~ 444 (449)
T Consensus 437 Dt~~Q~Rv~i~~l~~~l~~~~~~ 459 (460)
T PRK04173 437 DTMEQVRVKIDELEDYLAEKLKG 459 (460)
T ss_pred CCCCEEEEEHHHHHHHHHHHHCC
T ss_conf 87534898999999999998669