HHsearch alignment for GI: 254780870 and conserved domain: PRK04483

>PRK04483 threonyl-tRNA synthetase; Validated.
Probab=100.00  E-value=0  Score=722.97  Aligned_cols=400  Identities=18%  Similarity=0.295  Sum_probs=367.7

Q ss_pred             HHHHHHHCC-CCCCCCCCHHHHHHHCCCEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCC
Q ss_conf             788873107-1114125612213530320003881110431699999999999999986698897357512468987719
Q gi|254780870|r    6 YFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESG   84 (449)
Q Consensus         6 ~~~~~l~~~-~~d~~~~~~~ll~~~g~i~~~~~G~~~~lP~G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~~~SG   84 (449)
T Consensus       231 ~yl~~~eEakkRDHRklGkel~LF--~f~~~~pG~~~wlP~G~~i~~~le~~~r~~~~~~Gy~eV~tP~i~~~~Lw~~SG  308 (634)
T PRK04483        231 AYILRMEEADKRDHRKIGKAQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSG  308 (634)
T ss_pred             HHHHHHHHHHHCCHHHHHHHCCEE--EECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCEECCHHHHHHCC
T ss_conf             999999998865888875421106--733778864388166899999999999999998299599886251377876256


Q ss_pred             CCHHHHHHHCCHHHCCCCCCEECCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCEEEEEEECCEE
Q ss_conf             731122221040213786200034555431011000013420134026414653345667675-4345316687404221
Q gi|254780870|r   85 RYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF  163 (449)
Q Consensus        85 h~d~~~~em~~~~d~~~~~~~LrP~~~e~~~~i~~~~~~SYr~LPlr~y~ig~~fR~E~rp~~-GL~R~ReF~q~D~~~F  163 (449)
T Consensus       309 H~~~Y~e~Mf~-~~~~~~~~~lKPMNCP~H~~if~~~~rSYRdLPlR~aE~g~~~R~E~SG~L~GL~RvR~FtqdDaHIF  387 (634)
T PRK04483        309 HWDNYQDAMFF-TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVF  387 (634)
T ss_pred             CHHHHHHCCCE-ECCCCCEEEECCCCCHHHHHHHHCCCCCHHHCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf             16455303713-42554035515768564879987177444434366554330220567765457456889988983356


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCHHHHH
Q ss_conf             18868879999999998741111006201223311001013113343454686770143101003477641112201210
Q gi|254780870|r  164 DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII  243 (449)
Q Consensus       164 ~~~~e~~~~e~~~~~~~~~~i~~~lgl~~~~v~~~~~~ig~~~s~e~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  243 (449)
T Consensus       388 -c~~dQi~~Ei~~~l~~~~~vy~~fGf~~~~~~lStrpe-----------------k~~G~~~~W~~AE~~L~~al~~~g  449 (634)
T PRK04483        388 -CLESQIEAEVTAFHQQALAVYTAFGFDDIQIKIALRPE-----------------KRLGDDATWDKAEAALRSALGVCG  449 (634)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC-----------------CCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             -38999999999999999999986399538999635762-----------------345875568899999999999749


Q ss_pred             CCCCCCCCCCCCCCCCHHHCHHHHHCCCCCCCEEEEEEEECCCEEECCCCCCCCCEEEEECCCCCC-CCCCCCCCCCCCC
Q ss_conf             011220001363212011000233035876552432111158144223112230115896477772-3233666344743
Q gi|254780870|r  244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD-HYVQMGSYGIGAM  322 (449)
Q Consensus       244 ~~~~~~~~~~~~~~~~~d~~~~~~~d~l~~~~~~~~~~ie~~~~f~lG~~ys~~~~~~~~~~~g~~-~~~~~g~~giG~~  322 (449)
T Consensus       450 ~~y~~~~GegAFYGPKID~---~v~DalgR~~q~~TiQlD----f~lP~rF----~l~Y~~~dg~~~rPvmIHRAilGS~  518 (634)
T PRK04483        450 VEWQELPGEGAFYGPKIEY---HLKDAIGRTWQLGTMQVD----FMMPGRL----GAEYVDENSQKKHPVMLHRAIVGSM  518 (634)
T ss_pred             CCCEECCCCCCEECCCEEE---EEEECCCCEEECCEEEEE----CCCCCCC----CCEEECCCCCCCCEEEEEECCCCCH
T ss_conf             8707767970105662289---999279986741145762----1453436----7789856898386089994576778


Q ss_pred             CCHHHHHHCCCCCCCCCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCE
Q ss_conf             00233221023211111363320321102421788799999999999999986987999758979708678787489988
Q gi|254780870|r  323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPL  402 (449)
Q Consensus       323 R~~~alle~~~d~~g~~wP~~iaP~~v~Iipi~~~~~~~~~~A~~i~~~Lr~~Gi~v~~D~r~~~iGkK~~~Ad~~gip~  402 (449)
T Consensus       519 ERfi~iLiEh~~G~---fP~WLaP~Qv~iipv~~---~~~~ya~~v~~~L~~~g~rv~vD~~~e~lg~KIR~a~~~kiPy  592 (634)
T PRK04483        519 ERFIGILIEHHAGA---FPAWLAPVQVVVANITD---AQAEYVDSVRKTLANQGFRVSADLRNEKIGYKIREHTLQRVPY  592 (634)
T ss_pred             HHHHHHHHHHCCCC---CCCCCCCCEEEEEECCH---HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCE
T ss_conf             99999999973798---98576873589995580---4899999999999978978999789985749999874338998


Q ss_pred             EEEECCCHHHCCEEEEEECCCCCEEEEEHHHHHHHHHHHHH
Q ss_conf             99986240235718999989997878619999999999987
Q gi|254780870|r  403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS  443 (449)
Q Consensus       403 ~iiiG~~el~~~~Vtir~r~tg~q~~v~l~eli~~i~~~l~  443 (449)
T Consensus       593 ~lVvG~kE~e~~~VsvR~r~~~~~~~~~~~~fi~~l~~e~a  633 (634)
T PRK04483        593 LLVVGDREKENGAVAVRTRSGEDLGTMTVSAFIERLQAEQA  633 (634)
T ss_pred             EEEECHHHHHCCEEEEEECCCCCCCEEEHHHHHHHHHHHHC
T ss_conf             99981256645978999778974571569999999998762