HHsearch alignment for GI: 254780870 and conserved domain: PRK12420
>PRK12420 histidyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=369.11 Aligned_cols=369 Identities=20% Similarity=0.310 Sum_probs=238.6
Q ss_pred ECCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHC-CCCHHHHHHHCCHHHCCCCCCEECCCCCC
Q ss_conf 00388111043169999999999999998669889735751246898771-97311222210402137862000345554
Q gi|254780870|r 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVES-GRYDSYGKEMLRLADRNDKAMIYGPTHEE 112 (449)
Q Consensus 34 ~~~~G~~~~lP~G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~~~S-Gh~d~~~~em~~~~d~~~~~~~LrP~~~e 112 (449)
T Consensus 5 q~~rG~rD~lp~e~~~~~~i~~~~~~~~~~~Gy~~I~tP~~E~~elf~~~~g~~~~i~kemy~f~D~~gr~l~LRPe~Ta 84 (421)
T PRK12420 5 KNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYTLQDQGKRDLALRYDLTI 84 (421)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCCHHHHHEEEEECCCCCEEEECCCCCH
T ss_conf 89998887899999999999999999999859947247650118764244788442241107888189987985677658
Q ss_pred CCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 31011000013420134026414653345667675434531668740422118868879999999998741111006201
Q gi|254780870|r 113 VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 (449)
Q Consensus 113 ~~~~i~~~~~~SYr~LPlr~y~ig~~fR~E~rp~~GL~R~ReF~q~D~~~F~~~~e~~~~e~~~~~~~~~~i~~~lgl~~ 192 (449)
T Consensus 85 ~iaR~~a~~~-~-~~~P~k~~y~g~vfR~e-rpq~G--R~ReF~Q~GvEiiG~~~~~aDaE---iI~la~~~l~~lgl~- 155 (421)
T PRK12420 85 PFAKVVAMNP-N-IRLPFKRYEIGKVFRDG-PIKQG--RFREFIQCDVDIVGVESVMAEAE---LMSMAFELFRTLNLE- 155 (421)
T ss_pred HHHHHHHHCC-C-CCCCEEEEEECCEEECC-CCCCC--CCCEEEECCEEEECCCCHHHHHH---HHHHHHHHHHHCCCC-
T ss_conf 9999999775-7-77874588876778538-98788--55513435754207887788999---999999999965986-
Q ss_pred HHHHHCCHHCCCCH------HHHHH----HHCC----CCCCEEEECCCCCCCCCCHHH-CCHHHHH------CCCCCCCC
Q ss_conf 22331100101311------33434----5468----677014310100347764111-2201210------01122000
Q gi|254780870|r 193 IPMRAESGPIGGDL------SHEFI----VLAD----TGETQVFCSKDFMDFPIPSEN-TDFDDII------SLNSIVEQ 251 (449)
Q Consensus 193 ~~v~~~~~~ig~~~------s~e~~----~~~~----~~e~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~ 251 (449)
T Consensus 156 ~~i~i~~~~l~~~ll~~~~~~~e~~~~~~~~ldk~~k~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (421)
T PRK12420 156 VTIQYNNRKLLNGILQAINIPTELTSDVILSLDKIEKIGIDGV--RKDVLERGISEEMADTICNTVLSCLQLSIADFKEA 233 (421)
T ss_pred EEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHH--HHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 5999552999998888709999999999999887653167889--99988668888999879998735680138998632
Q ss_pred CCCCCCCCHHHCHHHHH---CCCCCC-----CEEEEEEEE--CCCEEEC-------------CCCCCCCCEEEEECCCCC
Q ss_conf 13632120110002330---358765-----524321111--5814422-------------311223011589647777
Q gi|254780870|r 252 WTAPYAATSDVHNEKLF---DSLPEN-----KRVSARGIE--VGHIFYF-------------GTKYSLPMSATFKGADGK 308 (449)
Q Consensus 252 ~~~~~~~~~d~~~~~~~---d~l~~~-----~~~~~~~ie--~~~~f~l-------------G~~ys~~~~~~~~~~~g~ 308 (449)
T Consensus 234 ~~~~~~~e~~~~l~~l~~~L~~~gi~~~i~~D~~lVRGLdYYTg~VFE~~~~~~~~~~~i~gGGRYD~Li~-~f---gg~ 309 (421)
T PRK12420 234 FNNPLVADGVNELQQLQQYLIALGINENTIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSGGRYDNIIG-AF---RGD 309 (421)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHH-HH---CCC
T ss_conf 05855599999999999999976999518776767416664200589999558764434435665054898-81---899
Q ss_pred CCC-CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHC-CCEEEEECCCC
Q ss_conf 232-3366634474300233221023211111363320321102421788799999999999999986-98799975897
Q gi|254780870|r 309 DHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV-GCDVFWDDMGE 386 (449)
Q Consensus 309 ~~~-~~~g~~giG~~R~~~alle~~~d~~g~~wP~~iaP~~v~Iipi~~~~~~~~~~A~~i~~~Lr~~-Gi~v~~D~r~~ 386 (449)
T Consensus 310 ~~~~PavG-fa~Gierl~~~L~~~~-~----~----~~~~~v~v~~~~~~-----~~a~~ia~~LR~~~gi~~~~~~~~~ 374 (421)
T PRK12420 310 NMNYPTVG-ISFGLDVIYTALSQKE-T----I----SSTADVFIIPLGTE-----LQCLQIAQQLRSTTSLKVELELAGR 374 (421)
T ss_pred CCCCCEEE-EEEHHHHHHHHHHCCC-C----C----CCCCCEEEEECCCH-----HHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 89997479-9851999999985504-5----7----98898899978778-----9999999999845996699965999
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHCCEEEEEECCCCCEEEEEHH
Q ss_conf 9708678787489988999862402357189999899978786199
Q gi|254780870|r 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 (449)
Q Consensus 387 ~iGkK~~~Ad~~gip~~iiiG~~el~~~~Vtir~r~tg~q~~v~l~ 432 (449)
T Consensus 375 ~lkkqlk~A~k~~~~~~iiiG~~E~~~~~v~lK~l~tg~q~~v~l~ 420 (421)
T PRK12420 375 KLKRALNYANKENIPYVLIIGEEELSTETVMLRNMKEGSEVKVPLS 420 (421)
T ss_pred CHHHHHHHHHHCCCCEEEEECCHHHHCCEEEEEECCCCCEEEEECC
T ss_conf 9999999998879999999876388789789998899973798288