HHsearch alignment for GI: 254780870 and conserved domain: cd00771
>cd00771 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain. ThrRS is a homodimer. It is responsible for the attachment of threonine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain.
Probab=100.00 E-value=0 Score=514.21 Aligned_cols=296 Identities=23% Similarity=0.356 Sum_probs=264.7
Q ss_pred CCCCCCHHHHHHHCCCEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCHHHHHHHCCH
Q ss_conf 14125612213530320003881110431699999999999999986698897357512468987719731122221040
Q gi|254780870|r 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 (449)
Q Consensus 17 d~~~~~~~ll~~~g~i~~~~~G~~~~lP~G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~~~SGh~d~~~~em~~~ 96 (449)
T Consensus 1 dHrklg~el~lf~-~~~~~g~G~~~w~P~G~~i~~~L~~~ir~~~~~~Gy~eV~tP~i~~~~Lw~~SGH~~~y~e~mf~~ 79 (298)
T cd00771 1 DHRRLGGELELFF-FFDEAGPGLPFWLPKGAIIRNELEDFLRELQRKRGYQEVETPIIYNKELWETSGHWDHYRENMFPF 79 (298)
T ss_pred CHHHHCCCCCCCC-CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCCCCEEEE
T ss_conf 9457440115751-177766765788388899999999999999998699899886126655675477631136856888
Q ss_pred HHCCCCCCEECCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCEEEEEEECCEECCCHHHHHHHHH
Q ss_conf 213786200034555431011000013420134026414653345667675-4345316687404221188688799999
Q gi|254780870|r 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 (449)
Q Consensus 97 ~d~~~~~~~LrP~~~e~~~~i~~~~~~SYr~LPlr~y~ig~~fR~E~rp~~-GL~R~ReF~q~D~~~F~~~~e~~~~e~~ 175 (449)
T Consensus 80 -~~~~~~~~LkPmnCp~h~~i~~~~~~SYrdLPlR~~E~g~~~R~E~sG~L~GL~RvR~FtqdDaHiF-c~~eQ~~~E~~ 157 (298)
T cd00771 80 -EEEDEEYGLKPMNCPGHCLIFKSKPRSYRDLPLRLAEFGTVHRYEQSGALHGLTRVRGFTQDDAHIF-CTPDQIKEEIK 157 (298)
T ss_pred -EECCCCEEEECCCCHHHHHHHHCCCCCHHHCCHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCEEE-CCHHHHHHHHH
T ss_conf -8625416885068688999986355673434676520750554767767557445556745763244-16889999999
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHCCHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCHHHHHCCCCCCCCCCCC
Q ss_conf 99998741111006201223311001013113343454686770143101003477641112201210011220001363
Q gi|254780870|r 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 (449)
Q Consensus 176 ~~~~~~~~i~~~lgl~~~~v~~~~~~ig~~~s~e~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (449)
T Consensus 158 ~~~~~~~~vy~~fG~~~~~~~ls~r~ek~-----------------~g~~e~W~~ae~~l~~~l~~~~~~~~~~~ge~AF 220 (298)
T cd00771 158 GVLDLIKEVYSDFGFFDYKVELSTRPEKF-----------------IGSDEVWEKAEAALREALEEIGLPYEINEGEGAF 220 (298)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCC-----------------CCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCEE
T ss_conf 99999999999828873248996478767-----------------7998999999999999999759985757886001
Q ss_pred CCCCHHHCHHHHHCCCCCCCEEEEEEEECCCEEECCCCCCCCCEEEEECCCCCCC-CCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 2120110002330358765524321111581442231122301158964777723-233666344743002332210232
Q gi|254780870|r 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHD 334 (449)
Q Consensus 256 ~~~~~d~~~~~~~d~l~~~~~~~~~~ie~~~~f~lG~~ys~~~~~~~~~~~g~~~-~~~~g~~giG~~R~~~alle~~~d 334 (449)
T Consensus 221 yGPKiD~---~~~D~lgR~~q~~TiQlD----f~lp~rF----~l~Y~~~dg~~~~Pv~iHrai~GS~ERfia~LiE~~~ 289 (298)
T cd00771 221 YGPKIDF---HVKDALGREWQCSTIQLD----FNLPERF----DLTYIGEDGEKKRPVMIHRAILGSIERFIGILIEHYA 289 (298)
T ss_pred EEEEEEE---EEEECCCCEEEEEEEEEE----ECCHHHC----CCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 3005899---986068976870146885----0674326----9889989998648989995576709999999998607
Q ss_pred CCCCCCCHHHCC
Q ss_conf 111113633203
Q gi|254780870|r 335 GKGIIWPDSVAP 346 (449)
Q Consensus 335 ~~g~~wP~~iaP 346 (449)
T Consensus 290 G~---~P~WLaP 298 (298)
T cd00771 290 GK---FPLWLAP 298 (298)
T ss_pred CC---CCCCCCC
T ss_conf 99---8866593