>cd00777 AspRS_core Asp tRNA synthetase (aspRS) class II core domain. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. AspRS is a homodimer, which attaches a specific amino acid to the 3' OH group of ribose of the appropriate tRNA. The catalytic core domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. AspRS in this family differ from those found in the AsxRS family by a GAD insert in the core domain.

Probab=98.59 E-value=8e-08 Score=68.87 Aligned_cols=110 Identities=19% Similarity=0.179 Sum_probs=66.8 Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCHHHHHHHCC-HHHCCCCCCEECCCCCCCCCCC-HHHCCCC Q ss_conf 9999999999999998669889735751246898771973112222104-0213786200034555431011-0000134 Q gi|254780870|r 47 QKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-LADRNDKAMIYGPTHEEVMTDI-FRSHIKS 124 (449) Q Consensus 47 ~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~~~SGh~d~~~~em~~-~~d~~~~~~~LrP~~~e~~~~i-~~~~~~S 124 (449) T Consensus 1 lr~Rs~i~~~iR~ff~~~gflEV~TPiL~~~~----~e---g-a~~f~~~~~~~~~~~~~L~~-Spel~~k~l~~~g~-- 69 (280) T cd00777 1 LRLRSRVIKAIRNFLDEQGFVEIETPILTKST----PE---G-ARDFLVPSRLHPGKFYALPQ-SPQLFKQLLMVSGF-- 69 (280) T ss_pred CCHHHHHHHHHHHHHHHCCCEEEECCCCCCCC----CC---C-CCCCEECCCCCCCCCCCCCC-CHHHHHHHHHHCCC-- T ss_conf 96699999999999998898998798106878----77---6-76644244168876036887-98999999985687-- Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEECCCHHHHHHHHH Q ss_conf 201340264146533456676754345316687404221188688799999 Q gi|254780870|r 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 (449) Q Consensus 125 Yr~LPlr~y~ig~~fR~E~rp~~GL~R~ReF~q~D~~~F~~~~e~~~~e~~ 175 (449) T Consensus 70 -----~rvf~i~~~FR~E~~~~~---h~~EFtmLE~e~~~~~~~d~m~~~E 112 (280) T cd00777 70 -----DRYFQIARCFRDEDLRAD---RQPEFTQIDIEMSFVDQEDIMSLIE 112 (280) T ss_pred -----CCCEEEECEECCCCCCCC---CCHHHHHHHHHCCCCCHHHHHHHHH T ss_conf -----775798451747888876---6347762344226888999999999

HHsearch alignment for GI: 254780870 and conserved domain: cd00777