HHsearch alignment for GI: 254780870 and conserved domain: pfam01409
>pfam01409 tRNA-synt_2d tRNA synthetases class II core domain (F). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only phenylalanyl-tRNA synthetases. This is the core catalytic domain.
Probab=97.84 E-value=7.3e-05 Score=50.15 Aligned_cols=111 Identities=15% Similarity=0.182 Sum_probs=67.8
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH------HHCCCCHHHHHHHCCH-HHCCCCCCEECCCCCCCCCCC
Q ss_conf 169999999999999998669889735751246898------7719731122221040-213786200034555431011
Q gi|254780870|r 45 LGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW------VESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDI 117 (449)
Q Consensus 45 ~G~~i~~~le~~~r~~~~~~G~~ei~tP~l~~~eL~------~~SGh~d~~~~em~~~-~d~~~~~~~LrP~~~e~~~~i 117 (449)
T Consensus 14 G~~HPi~~~~~~i~~~f~~~GF~~~~g~eves~-~~NFDaLn~P~dHPaR~~~DTfy~~~~~~~~~~vLRtHTS~~q~r~ 92 (243)
T pfam01409 14 GGLHPLTRVLEEIRDIFLSMGFEEVEGPEVESD-FYNFDALNIPQDHPARDMQDTFYLKKPLKARRLLLRTHTTPVQART 92 (243)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCH-HHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCHHHHHH
T ss_conf 985859999999999998779868769835642-7777755789889876767603433666676865768798899999
Q ss_pred HHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEE
Q ss_conf 0000134201340264146533456676754345316687404221
Q gi|254780870|r 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 (449)
Q Consensus 118 ~~~~~~SYr~LPlr~y~ig~~fR~E~rp~~GL~R~ReF~q~D~~~F 163 (449)
T Consensus 93 l~----~~~~~p~r~~~~grvyR~d~~Dat---H~~~FhQ~Eg~vv 131 (243)
T pfam01409 93 LA----EKNKPPIKIFSIGRVFRRDQVDAT---HLPEFHQVEGLVV 131 (243)
T ss_pred HH----HCCCCCEEEECCCEEEECCCCCCC---CCCEEEEEEEEEE
T ss_conf 97----427998489814313325889843---1531057557896