HHsearch alignment for GI: 254780870 and conserved domain: pfam03129

>pfam03129 HGTP_anticodon Anticodon binding domain. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases it is probably the anticodon binding domain.
Probab=99.85  E-value=1.1e-20  Score=150.13  Aligned_cols=92  Identities=32%  Similarity=0.555  Sum_probs=87.9

Q ss_pred             CCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHCCEEEEEECCCCCEE
Q ss_conf             11024217887999999999999999869879997589797086787874899889998624023571899998999787
Q gi|254780870|r  348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE  427 (449)
Q Consensus       348 ~v~Iipi~~~~~~~~~~A~~i~~~Lr~~Gi~v~~D~r~~~iGkK~~~Ad~~gip~~iiiG~~el~~~~Vtir~r~tg~q~  427 (449)
T Consensus         1 qV~Vipi~~~~~-~~~~a~~i~~~Lr~~gi~v~~d~~~~~~~~k~~~a~~~g~p~~iiiG~~E~~~~~v~ik~r~~~~~~   79 (93)
T pfam03129         1 QVVVIPLGEKDE-LEDYAQKLAEELREAGIRVELDDRNESLGKKFRDADLIGIPFRLVVGEKELENGTVTVRDRDTGEKE   79 (93)
T ss_pred             CEEEEEECCCHH-HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECHHHHHCCEEEEEECCCCCEE
T ss_conf             999998228676-8999999999998789979998899997899998987099907889778885898999999999788


Q ss_pred             EEEHHHHHHHHHH
Q ss_conf             8619999999999
Q gi|254780870|r  428 DMSLEEVINYASH  440 (449)
Q Consensus       428 ~v~l~eli~~i~~  440 (449)
T Consensus        80 ~v~~~~~~~~i~~   92 (93)
T pfam03129        80 TVSLEELVEKLKE   92 (93)
T ss_pred             EEEHHHHHHHHHH
T ss_conf             9879999999974