BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780870|ref|YP_003065283.1| prolyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] (449 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780870|ref|YP_003065283.1| prolyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] gi|254040547|gb|ACT57343.1| prolyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 449 Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/449 (100%), Positives = 449/449 (100%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE Sbjct: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS Sbjct: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS Sbjct: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD Sbjct: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA Sbjct: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV Sbjct: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH Sbjct: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNRPVL 449 RLTGIREDMSLEEVINYASHRFSNNRPVL Sbjct: 421 RLTGIREDMSLEEVINYASHRFSNNRPVL 449 >gi|315122709|ref|YP_004063198.1| prolyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496111|gb|ADR52710.1| prolyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 453 Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/442 (80%), Positives = 398/442 (90%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+RSKYFLP +QENP+DAEI SHK+MLRTGMI QHSKG+YSWLPLG KAL VNAIIREE Sbjct: 1 MKRSKYFLPAMQENPKDAEIISHKMMLRTGMISQHSKGMYSWLPLGNKALSKVNAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA+EMS PTLQSADLW+ESGRY+SYGKEMLR+ DRNDK+M+YGPT+EE+MTDIFRS Sbjct: 61 QDRIGALEMSNPTLQSADLWIESGRYESYGKEMLRIVDRNDKSMLYGPTNEEMMTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+KSYR+LP YQ+QLKFRDELRPRFG MRSREFLMKDAYSFDLT E S HSYNKMFVS Sbjct: 121 HVKSYRDLPLILYQMQLKFRDELRPRFGTMRSREFLMKDAYSFDLTFEDSVHSYNKMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLRIFHRLGLKSIPMRAESGPIGG LSHEFIVL++TGETQ+FCSKDFM+FPIPSENTDFD Sbjct: 181 YLRIFHRLGLKSIPMRAESGPIGGSLSHEFIVLSNTGETQLFCSKDFMNFPIPSENTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 DI+SL IV QWT PYAATSDVHNEKLF SL E R+ ARGIEVGHIF+FGTKYS PMSA Sbjct: 241 DIVSLKDIVRQWTTPYAATSDVHNEKLFHSLSEEDRIVARGIEVGHIFHFGTKYSHPMSA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 TF+GADGK HYVQMGSYGIG MRVVAA+IESSHD +GIIWPDSV+PF ISLIN+K HDQ Sbjct: 301 TFQGADGKKHYVQMGSYGIGPMRVVAAIIESSHDAQGIIWPDSVSPFHISLINLKIHDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C A +KIY +LS+ GCDVF DD+ EQ GS+FA+ADLLGFPLQ+I+GSKF+SDSKVEIK+ Sbjct: 361 CCSASDKIYTQLSQAGCDVFLDDVDEQAGSKFALADLLGFPLQIIIGSKFISDSKVEIKN 420 Query: 421 RLTGIREDMSLEEVINYASHRF 442 R TG +E MSLEEV+NYAS+RF Sbjct: 421 RSTGTKEYMSLEEVVNYASNRF 442 >gi|327194827|gb|EGE61661.1| prolyl-tRNA synthetase protein [Rhizobium etli CNPAF512] Length = 440 Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust. Identities = 288/436 (66%), Positives = 364/436 (83%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIREE Sbjct: 1 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR ++ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRINDRQERPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+DF IP E+TDFD Sbjct: 181 YLRTFDRLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVDFDIPGESTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I ++WT+ YAATS++H+E F+++PE +R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 SVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGERLSARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF + +IN+KA DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDVVVINMKAGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA L+K G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAIN 436 >gi|190891305|ref|YP_001977847.1| prolyl-tRNA synthetase [Rhizobium etli CIAT 652] gi|226701323|sp|B3PW17|SYP_RHIE6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|190696584|gb|ACE90669.1| prolyl-tRNA synthetase protein [Rhizobium etli CIAT 652] Length = 440 Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust. Identities = 287/436 (65%), Positives = 363/436 (83%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIREE Sbjct: 1 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR ++ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQERPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+DF IP E+TDFD Sbjct: 181 YLRTFDRLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVDFDIPGESTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I ++WT+ YAATS++H+E F+++PE +R+SARGIE GHIFYFGTKYS PM A Sbjct: 241 SVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGERLSARGIEAGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF + +IN+KA DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDVVVINMKAGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA L+K G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAIN 436 >gi|162329642|ref|YP_469149.2| prolyl-tRNA synthetase [Rhizobium etli CFN 42] gi|114152238|sp|Q2K9R4|SYP_RHIEC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 440 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 288/436 (66%), Positives = 360/436 (82%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIREE Sbjct: 1 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+ F IP ENTDFD Sbjct: 181 YLRTFERLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVGFDIPGENTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I ++WT+ YAATS++H+E F+++PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 SVEGLKAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF + +IN+K DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDVVVINMKVGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA L K G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALKKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAIN 436 >gi|241204106|ref|YP_002975202.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857996|gb|ACS55663.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 440 Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust. Identities = 288/436 (66%), Positives = 361/436 (82%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIR+E Sbjct: 1 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG LSHEFI+LADTGE++VFC KDF+DF IP +TDFD Sbjct: 181 YLRTFDRLGLRAIPMRADTGPIGGKLSHEFIILADTGESEVFCHKDFVDFDIPGAHTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I ++WT+ YAATS++H+E F+++PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 SVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF I +IN+KA DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDIVVINMKAGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA L+K G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAIN 436 >gi|218463078|ref|ZP_03503169.1| prolyl-tRNA synthetase [Rhizobium etli Kim 5] Length = 440 Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust. Identities = 288/436 (66%), Positives = 361/436 (82%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIR+E Sbjct: 1 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+ F IP E TDFD Sbjct: 181 YLRTFERLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVGFDIPDERTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I E+WT+ YAATS++H+E F+++PE+ R+SARGIEVGHIFYFGTKYS M A Sbjct: 241 SVEGLQAIFEKWTSLYAATSEMHDEAAFNAVPESDRLSARGIEVGHIFYFGTKYSETMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF I +IN+KA DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDIVVINMKAGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA L+K G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAIN 436 >gi|116251485|ref|YP_767323.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|114152239|sp|Q1MIJ6|SYP_RHIL3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|115256133|emb|CAK07214.1| putative prolyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 440 Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 287/436 (65%), Positives = 361/436 (82%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIR+E Sbjct: 1 MRLSRFFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT E ++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREAAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG LSHEFI+LADTGE++VFC KDF+DF +P E+TDFD Sbjct: 181 YLRTFDRLGLRAIPMRADTGPIGGKLSHEFIILADTGESEVFCHKDFVDFDVPGEHTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I ++WT+ YAATS++H+E F+++PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 SVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF I +IN+KA DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDIVVINMKAGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA LSK G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALSKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAIN 436 >gi|222085595|ref|YP_002544125.1| prolyl-tRNA synthetase protein [Agrobacterium radiobacter K84] gi|221723043|gb|ACM26199.1| prolyl-tRNA synthetase protein [Agrobacterium radiobacter K84] Length = 475 Score = 635 bits (1637), Expect = e-180, Method: Compositional matrix adjust. Identities = 286/436 (65%), Positives = 362/436 (83%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VN IIREE Sbjct: 36 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNKIIREE 95 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 96 QNRSGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMITDIFRS 155 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG+ +YNKMF + Sbjct: 156 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTQEGAVIAYNKMFAA 215 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF++F IPSE+T+FD Sbjct: 216 YLRTFDRLGLRAIPMRADTGPIGGELSHEFIILADTGESEVFCHKDFVNFDIPSEDTNFD 275 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L I ++WT+ YAATS++H+E F+++PE +R+SARGIEVGHIFYFGTKYS PM A Sbjct: 276 DVAGLKGIFDKWTSLYAATSEMHDEATFNAIPEGERLSARGIEVGHIFYFGTKYSEPMGA 335 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+V A+IE+SHD GIIWP SVAPF + +IN+K+ DQ Sbjct: 336 KVQGPDGKEHAVHMGSYGIGPTRLVPAIIEASHDENGIIWPASVAPFDVVVINMKSGDQA 395 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE IYA LSK G DV +DD ++ G++FA ADL+G P+Q+IVG + ++ +VE+K Sbjct: 396 CDAACETIYAALSKAGKDVLFDDRDDRAGTKFATADLIGVPVQIIVGPRSIAGGEVEVKD 455 Query: 421 RLTGIREDMSLEEVIN 436 R TG RE M++E IN Sbjct: 456 RKTGARETMTVEAAIN 471 >gi|209548882|ref|YP_002280799.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226701324|sp|B5ZYN2|SYP_RHILW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|209534638|gb|ACI54573.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 440 Score = 635 bits (1637), Expect = e-180, Method: Compositional matrix adjust. Identities = 286/436 (65%), Positives = 359/436 (82%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIR+E Sbjct: 1 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+ F IP + TDFD Sbjct: 181 YLRTFDRLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVGFDIPDDRTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I ++WT+ YAATS++H+E F+++PE R+SARGIEVGHIFYFGTKYS M A Sbjct: 241 SVDGLKAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF I +IN+KA DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDIVVINMKAGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA L+K G DV +DD ++ G++FA ADL+G P Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPFQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAIN 436 >gi|150396141|ref|YP_001326608.1| prolyl-tRNA synthetase [Sinorhizobium medicae WSM419] gi|166980159|sp|A6U7Z3|SYP_SINMW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150027656|gb|ABR59773.1| prolyl-tRNA synthetase [Sinorhizobium medicae WSM419] Length = 442 Score = 625 bits (1612), Expect = e-177, Method: Compositional matrix adjust. Identities = 280/436 (64%), Positives = 355/436 (81%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+PIL+ENP++AEI SH+LMLRTGMI Q S GIY+WLPLG++ LD VNA+IREE Sbjct: 1 MRLSRFFMPILKENPKEAEIVSHRLMLRTGMIRQQSAGIYTWLPLGKRVLDKVNAVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GAIE+ +PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRSGAIELLMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYRNLP Y IQLKFRDE+RPRFG MRSREFLMKDAYSFDL G++H+Y +MF + Sbjct: 121 YVKSYRNLPLNLYHIQLKFRDEIRPRFGTMRSREFLMKDAYSFDLDRAGAEHAYKRMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+ F IP E+T+FD Sbjct: 181 YLRTFDRLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFLGFDIPGEDTNFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ S+N+I E+WT+ YAATS++H E FD++PE +R+SARGIEVGHIFYFGTKYS M A Sbjct: 241 DVASMNAIFEKWTSRYAATSEMHEEAAFDAIPEGERLSARGIEVGHIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+V A+IE+SHD GIIWP +APF I +IN+K D Sbjct: 301 KVLGPDGKEHTVHMGSYGIGPTRLVPAIIEASHDDNGIIWPKGIAPFDIVVINMKTGDDA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC ++Y+ L K G DV DD E+ G +FA AD++G P+QVIVG + +++ +VE+K Sbjct: 361 CDTACGRLYSDLGKAGFDVLLDDTDERAGGKFATADIIGVPVQVIVGPRSIANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG RE M++E IN Sbjct: 421 RKTGARETMTVEAAIN 436 >gi|15965039|ref|NP_385392.1| prolyl-tRNA synthetase [Sinorhizobium meliloti 1021] gi|307301111|ref|ZP_07580880.1| prolyl-tRNA synthetase [Sinorhizobium meliloti BL225C] gi|307317844|ref|ZP_07597282.1| prolyl-tRNA synthetase [Sinorhizobium meliloti AK83] gi|81854328|sp|Q92QN2|SYP_RHIME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|15074218|emb|CAC45865.1| Probable prolyl-tRNA synthetase [Sinorhizobium meliloti 1021] gi|306896606|gb|EFN27354.1| prolyl-tRNA synthetase [Sinorhizobium meliloti AK83] gi|306904066|gb|EFN34652.1| prolyl-tRNA synthetase [Sinorhizobium meliloti BL225C] Length = 442 Score = 621 bits (1601), Expect = e-176, Method: Compositional matrix adjust. Identities = 278/436 (63%), Positives = 354/436 (81%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+PIL+ENP++AEI SH+LMLRTGM+ Q S GIY+WLPLG++ LD VNAIIREE Sbjct: 1 MRLSRFFMPILKENPKEAEIVSHRLMLRTGMVRQQSAGIYTWLPLGKRVLDKVNAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GAIE+ +PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRSGAIELLMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYRNLP Y IQLKFRDE+RPRFG MRSREFLMKDAYSFDL G++H+YNKMF + Sbjct: 121 YVKSYRNLPLNLYHIQLKFRDEIRPRFGTMRSREFLMKDAYSFDLDRAGAEHAYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+ F IP E+T+FD Sbjct: 181 YLRTFDRMGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFLGFDIPGEDTNFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +I ++WT+ YAATS++H+E F ++ E +R+SARGIEVGHIFYFGTKYS M A Sbjct: 241 DVAGLKTIFDKWTSRYAATSEMHDEAAFGAIAEGERLSARGIEVGHIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+V A+IE+SHD GIIWP +APF + +IN+K D+ Sbjct: 301 KVLGPDGKEHTVHMGSYGIGPTRLVPAIIEASHDDNGIIWPKGIAPFDVVVINMKTGDEA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC K+Y+ L K G DV DD E+ G +FA ADL+G P+QVIVG + +++ +VE+K Sbjct: 361 CDAACGKVYSDLGKAGFDVLLDDTDERAGGKFATADLIGVPVQVIVGPRSIANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG RE M++E IN Sbjct: 421 RKTGARETMTVEAAIN 436 >gi|227821637|ref|YP_002825607.1| prolyl-tRNA synthetase [Sinorhizobium fredii NGR234] gi|227340636|gb|ACP24854.1| prolyl-tRNA synthetase [Sinorhizobium fredii NGR234] Length = 501 Score = 619 bits (1596), Expect = e-175, Method: Compositional matrix adjust. Identities = 279/436 (63%), Positives = 354/436 (81%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLRTGMI Q S GIYSWLPLG++ LD VNAIIREE Sbjct: 60 MRLSRYFMPILKENPKEAEIVSHRLMLRTGMIRQQSAGIYSWLPLGKRVLDKVNAIIREE 119 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GA+E+ +PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 120 QNRSGAVELLMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMITDIFRS 179 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYRNLP Y IQLKFRDE+RPRFG MRSREFLMKDAYSFDL EG++H+YNKMF + Sbjct: 180 SVKSYRNLPLNLYHIQLKFRDEIRPRFGTMRSREFLMKDAYSFDLDREGAEHAYNKMFAA 239 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGG+LSHEFI+LADTGE++V+C KDF+ F IP ++T+FD Sbjct: 240 YLRTFDRMGLRAIPMRADTGPIGGNLSHEFIILADTGESEVYCHKDFLGFDIPGKDTNFD 299 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +I ++WT+ YAATS++H+E FD++ E ++VSARGIEVGHIFYFGTKYS M A Sbjct: 300 DVAGLKAIFDKWTSRYAATSEMHDEAAFDAISEGEKVSARGIEVGHIFYFGTKYSEAMGA 359 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+V A+IE+SHD GIIWP SVAPF +IN+K D Sbjct: 360 KVLGPDGKEHIVHMGSYGIGPTRLVPAIIEASHDENGIIWPKSVAPFDAVVINMKTGDAA 419 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +Y+ L K G DV DD ++ G++FA ADL+G P+Q+IVG + +++ +VE+K Sbjct: 420 CDAACGTLYSDLGKAGFDVLLDDTDDRAGAKFATADLIGVPVQIIVGPRSIANGEVEVKD 479 Query: 421 RLTGIREDMSLEEVIN 436 R TG RE M++E IN Sbjct: 480 RKTGERETMTVEAAIN 495 >gi|222148295|ref|YP_002549252.1| prolyl-tRNA synthetase [Agrobacterium vitis S4] gi|221735283|gb|ACM36246.1| prolyl-tRNA synthetase [Agrobacterium vitis S4] Length = 498 Score = 617 bits (1592), Expect = e-175, Method: Compositional matrix adjust. Identities = 281/436 (64%), Positives = 355/436 (81%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLRTGMI Q S+GIYSWLPLG++ LD VNAIIR+E Sbjct: 59 MRLSRYFLPILKENPKEAEIVSHRLMLRTGMIRQQSQGIYSWLPLGKRVLDKVNAIIRQE 118 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PTLQSA+LW ESGRYD YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 119 QNRAGAVELLMPTLQSAELWQESGRYDDYGKEMLRIKDRQDRPMLYGPTNEEMITDIFRS 178 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQLKFRDE+RPRFG MRSREFLMKDAYSFDLT E + HSYNKMF + Sbjct: 179 YVKSYKSLPLNLYHIQLKFRDEIRPRFGTMRSREFLMKDAYSFDLTKESAIHSYNKMFAA 238 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+ SHEFI+LADTGE++VFC K F+D IPS +TDFD Sbjct: 239 YLRTFDRLGLRAIPMRADTGPIGGNHSHEFIILADTGESEVFCHKSFLDRAIPSADTDFD 298 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +I + WT+ YAATS++H+E + ++P++ ++SARGIEVGHIFYFGTKYS PM A Sbjct: 299 DVAGLQAIFDDWTSHYAATSEMHDEAAYGAMPDDAKISARGIEVGHIFYFGTKYSEPMGA 358 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+V A+IE+SHD GIIWP SVAPF +IN+KA D Sbjct: 359 KVQGPDGKEHLVHMGSYGIGPTRLVPAIIEASHDENGIIWPASVAPFDAIIINMKAGDAG 418 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC+ +Y L+K G DV DD ++ G++FA+ADL+G P QVIVG + V++ +VE+K+ Sbjct: 419 CDGACDTVYGALTKAGKDVLLDDTDDRAGAKFALADLIGVPYQVIVGPRSVANGEVELKN 478 Query: 421 RLTGIREDMSLEEVIN 436 R TG RE M++E IN Sbjct: 479 RKTGERETMTIEAAIN 494 >gi|159184694|ref|NP_354297.2| prolyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] gi|81848693|sp|Q8UFV9|SYP_AGRT5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|159139984|gb|AAK87082.2| prolyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] Length = 440 Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust. Identities = 284/438 (64%), Positives = 358/438 (81%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR GMI Q S GIYSWLPLG++ LD VN IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRAGMIRQQSAGIYSWLPLGKRVLDKVNKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ+A+LW ESGRYD YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELLMPTLQTAELWQESGRYDDYGKEMLRIKDRQDRQMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+NLP Y IQLKFRDE+RPRFG MRSREFLMKDAYSFDLT E + HSYNKMFV+ Sbjct: 121 YVKSYKNLPLNLYHIQLKFRDEVRPRFGTMRSREFLMKDAYSFDLTKEDAIHSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+ SHEFI+LADTGE++VFC K F+D IP+E+TDFD Sbjct: 181 YLRTFERLGLRAIPMRADTGPIGGNHSHEFIILADTGESEVFCHKSFLDRAIPAESTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +L + ++WTA YAATS++H++ +D++PE +R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAALQGVFDEWTADYAATSEMHDDAAYDAIPEGERLSARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+V A+IE+SHD GIIWP SVAPF + +IN+KA D Sbjct: 301 KVQGKDGKEHPVHMGSYGIGPTRLVPAIIEASHDENGIIWPASVAPFDVVIINMKAGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACEK+Y +LS G DV +DD ++ G +FA ADL+G P+Q+IVG + V++ +VE+K Sbjct: 361 CDAACEKLYYQLSNAGKDVLYDDTDDRAGQKFATADLIGVPVQIIVGPRSVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE +++E +N A Sbjct: 421 RKTGERETVTIEAAMNKA 438 >gi|325292651|ref|YP_004278515.1| Prolyl-tRNA synthetase [Agrobacterium sp. H13-3] gi|325060504|gb|ADY64195.1| Prolyl-tRNA synthetase [Agrobacterium sp. H13-3] Length = 477 Score = 605 bits (1561), Expect = e-171, Method: Compositional matrix adjust. Identities = 279/436 (63%), Positives = 357/436 (81%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S GIYSWLPLG++ LD VN IIREE Sbjct: 38 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSAGIYSWLPLGKRVLDKVNRIIREE 97 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R+GAIE+ +PTLQ+A+LW ESGRYD YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 98 QDRSGAIELLMPTLQTAELWQESGRYDDYGKEMLRIKDRQDRQMLYGPTNEEMITDIFRS 157 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+NLP Y IQLKFRDE+RPRFG MRSREFLMKDAYSFDLT E + HSYNKMFV+ Sbjct: 158 YVKSYKNLPLNLYHIQLKFRDEVRPRFGTMRSREFLMKDAYSFDLTKEDAIHSYNKMFVA 217 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+ SHEFI+LADTGE++VFC K F+D IP+++T+FD Sbjct: 218 YLRTFERLGLRAIPMRADTGPIGGNHSHEFIILADTGESEVFCHKSFLDRAIPADDTNFD 277 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +L + ++WTA YAATS++H+E +D++P+ +R+SARGIEVGHIFYFGTKYS PM A Sbjct: 278 DVAALQGVFDEWTADYAATSEMHDEAAYDAIPDGQRLSARGIEVGHIFYFGTKYSEPMGA 337 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +GADGK+H V MGSYGIG R+V A+IE+SHD GIIWP SVAPF + +IN+KA D Sbjct: 338 KVQGADGKEHPVHMGSYGIGPTRLVPAIIEASHDENGIIWPASVAPFDVVIINMKAGDAA 397 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACEK+Y LS G DV +DD ++ G +FA ADL+G P+Q+IVG + ++ +VE+K Sbjct: 398 CDAACEKLYYSLSNAGKDVLYDDTDDRAGQKFATADLIGVPMQIIVGPRSAANGEVEVKD 457 Query: 421 RLTGIREDMSLEEVIN 436 R TG RE +++E +N Sbjct: 458 RKTGDRETVTIEAAMN 473 >gi|86281359|gb|ABC90422.1| prolyl-tRNA synthetase protein [Rhizobium etli CFN 42] Length = 410 Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust. Identities = 267/406 (65%), Positives = 333/406 (82%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI Q S+GIYSWLPLG++ LD VNAIIREEQNR GAIE+S+PTLQSA+LW ESGRYD+YG Sbjct: 1 MIRQQSQGIYSWLPLGKRVLDKVNAIIREEQNRAGAIELSMPTLQSAELWQESGRYDAYG 60 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM 150 KEMLR+ DR D+ M+YGPT+EE++TDIFRS +KSY++LP Y IQLKFRDE+RPRFG M Sbjct: 61 KEMLRIKDRQDRPMLYGPTNEEMVTDIFRSSVKSYKDLPLNLYHIQLKFRDEIRPRFGTM 120 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RSREF+MKDAYSFDLT EG++HSYNKMF +YLR F RLGL++IPMRA++GPIGG+LSHEF Sbjct: 121 RSREFMMKDAYSFDLTREGAEHSYNKMFAAYLRTFERLGLRAIPMRADTGPIGGNLSHEF 180 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 I+LADTGE++VFC KDF+ F IP ENTDFD + L +I ++WT+ YAATS++H+E F++ Sbjct: 181 IILADTGESEVFCHKDFVGFDIPGENTDFDSVEGLKAIFDKWTSLYAATSEMHDEAAFNA 240 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +PE R+SARGIEVGHIFYFGTKYS PM A +G DGK+H+V MGSYGIG R+V A+IE Sbjct: 241 VPEGDRLSARGIEVGHIFYFGTKYSEPMGAKVQGPDGKEHFVHMGSYGIGPTRLVPAIIE 300 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +SHD GIIWP SVAPF + +IN+K DQ C D CE IYA L K G DV +DD ++ G+ Sbjct: 301 ASHDDNGIIWPASVAPFDVVVINMKVGDQACDDTCELIYAALKKAGKDVLYDDTDDRAGT 360 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +FA ADL+G P+Q+I G + V++ +VE+K R TG RE M++E IN Sbjct: 361 KFATADLIGVPVQIIAGPRAVANGEVEVKDRKTGARETMTIEAAIN 406 >gi|110633394|ref|YP_673602.1| prolyl-tRNA synthetase [Mesorhizobium sp. BNC1] gi|123162548|sp|Q11JI8|SYP_MESSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|110284378|gb|ABG62437.1| prolyl-tRNA synthetase [Chelativorans sp. BNC1] Length = 442 Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust. Identities = 261/434 (60%), Positives = 347/434 (79%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E PR+AEI SH+LMLR+GMI Q G +SWLPLG++ LD V I+REE Sbjct: 1 MRVSRYFLPILKETPREAEIVSHRLMLRSGMIRQQGAGSFSWLPLGKRVLDKVCQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA E+ +PT+QSADLW+ESGRY+ YGKEMLR+ DR D+AM+YGPT+EE++TDIFR+ Sbjct: 61 QDRAGAQEILMPTIQSADLWIESGRYNDYGKEMLRIRDRQDRAMLYGPTNEEMVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +YN+MFV+ Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKAAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGGDLSHEFI+LA TGE++VFC+KDF+D P+P + DF Sbjct: 181 YLRTFARMGLKAIPMRADTGPIGGDLSHEFIILASTGESEVFCNKDFLDLPVPPADVDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + +V +WT PYAAT ++H+E + +P K+++ARGIEVGHIF+FGTKYS PM+A Sbjct: 241 NDAEIGGVVSEWTTPYAATDEMHDEAAWAEVPAEKQLAARGIEVGHIFHFGTKYSKPMNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG++H+V MGSYGIG R+ AA+IE+SHD GIIWP+SVAPF ++LIN+K D Sbjct: 301 KVTGPDGQEHFVSMGSYGIGPTRLTAAIIEASHDDGGIIWPESVAPFDVALINMKVGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE++YA ++ G +V +DD ++ G++FA ADL+G P QVIVG + ++ +VE+K+ Sbjct: 361 CDRVCEELYAGMTAAGREVLYDDTDQRAGAKFATADLIGLPWQVIVGPRGIAAGEVEVKN 420 Query: 421 RLTGIREDMSLEEV 434 R TG RE++ + V Sbjct: 421 RATGERENLPISAV 434 >gi|260462251|ref|ZP_05810495.1| prolyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] gi|259032111|gb|EEW33378.1| prolyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] Length = 442 Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust. Identities = 272/443 (61%), Positives = 343/443 (77%), Gaps = 4/443 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENPR+AEI SH+LMLR GMI Q +G +SWLPLG++ LD V IIREE Sbjct: 1 MRLSRYFLPILKENPREAEIVSHRLMLRAGMIRQQGQGSFSWLPLGKRVLDKVCQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PT+QSADLW ESGRYD YGKEMLR+ DR D+ M+YGPT+EEV+T+I R+ Sbjct: 61 QNRAGALEILMPTIQSADLWRESGRYDDYGKEMLRIKDRQDRDMLYGPTNEEVVTEIVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +YN+MFVS Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDFEGAKAAYNRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LADTGE+QV+C +D++ +P ENTDF Sbjct: 181 YLRTFTRMGLQAIPMRADTGPIGGDLSHEFIILADTGESQVYCDRDYLSLQVPGENTDFA 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + IV+ WT PYAAT ++H++ +D L E RVSARGIEVGHIF+FG KYS PM A Sbjct: 241 NDGEIADIVKTWTTPYAATDEMHDQAAWDKLGEADRVSARGIEVGHIFHFGDKYSKPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKDH+V GSYGIG R+VAA+IE+SHD GIIWP++VAPF I +IN+K D Sbjct: 301 KVTGPDGKDHFVSGGSYGIGPSRLVAAIIEASHDENGIIWPEAVAPFDIGVINMKVGDAD 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C C+++YA + G DV +DD ++ G +FA ADL+G P QVIVG + V+ +VEIK+ Sbjct: 361 CDRVCDELYAAFADAGKDVLYDDTDQRPGGKFATADLIGLPWQVIVGPRGVAAGEVEIKN 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG RE + + E A RF Sbjct: 421 RKTGERETLPIAE----AKKRFG 439 >gi|163759522|ref|ZP_02166607.1| prolyl-tRNA synthetase [Hoeflea phototrophica DFL-43] gi|162283119|gb|EDQ33405.1| prolyl-tRNA synthetase [Hoeflea phototrophica DFL-43] Length = 447 Score = 585 bits (1507), Expect = e-165, Method: Compositional matrix adjust. Identities = 275/441 (62%), Positives = 342/441 (77%), Gaps = 5/441 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYFLPIL+ENP+DAEI SH+LM R GMI Q S GIYSWLPLG++ LD V I+REE Sbjct: 1 MRLSKYFLPILKENPKDAEIVSHRLMARAGMIKQQSAGIYSWLPLGKRVLDKVCNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PT+Q ADLW ESGRYD YG+EMLR+ DRND+ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGAIEILMPTIQPADLWRESGRYDDYGQEMLRINDRNDREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL E SK +YN+MFVS Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDERRPRFGVMRGREFLMKDAYSFDLDYEASKAAYNRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R GLKSIPMRA++GPIGG LSHEFIVLA+TGE+QVFC +DF F +P + ++D Sbjct: 181 YLRTFERCGLKSIPMRADTGPIGGSLSHEFIVLAETGESQVFCHRDFDGFAVPPVDMNYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE-----KLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D ++ ++VEQWT P+AAT ++ ++ + +D L E+ RVSARGIEVGHIF+FGTKYS Sbjct: 241 DAAAVAAVVEQWTTPFAATDEIMDKEEWAREAWDGLGEDARVSARGIEVGHIFHFGTKYS 300 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 PM+A +G DGK HYV MGSYGIG R++ A+IE+SHD GIIWP VAPF + LIN+K Sbjct: 301 EPMNAFVQGPDGKQHYVSMGSYGIGPSRLLGAIIEASHDENGIIWPKGVAPFDVGLINMK 360 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 D C ACE+I L G ++ +DD E+ G++FA ADL+G P+QVI G + V+D Sbjct: 361 PGDAACDAACERIETALENAGIELLYDDTDERAGAKFAKADLIGLPIQVIAGPRAVADGN 420 Query: 416 VEIKHRLTGIREDMSLEEVIN 436 VEIK R TG RE +S++E IN Sbjct: 421 VEIKVRATGERETLSIDEAIN 441 >gi|49474193|ref|YP_032235.1| prolyl-tRNA synthetase [Bartonella quintana str. Toulouse] gi|81827622|sp|Q6FZX5|SYP_BARQU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|49239697|emb|CAF26072.1| Prolyl-tRNA synthetase [Bartonella quintana str. Toulouse] Length = 441 Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust. Identities = 267/436 (61%), Positives = 341/436 (78%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP++AEI SH+LMLR GMI Q + GIYSWLPLG+K LD V IIREE Sbjct: 1 MRLSQYFLPLLKENPKEAEIISHRLMLRAGMIRQQTSGIYSWLPLGKKVLDKVCKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PT+QSADLW ESGRYD YG EMLR+ DR + ++YGPT+EE++TDIFRS Sbjct: 61 QERAGAVEILMPTVQSADLWRESGRYDDYGLEMLRIKDRQKRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EGSK SYN+MFV+ Sbjct: 121 YVHSYKDLPLNLYHIQWKFRDEIRPRFGVMRSREFLMKDAYSFDLDYEGSKTSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F LGLK+IPMRA++GPIGG+LSHEFI+LA+TGE+ +FC K F + +P + DF Sbjct: 181 YLRTFSCLGLKAIPMRADTGPIGGELSHEFIILAETGESAIFCDKKFFELTVPHSSIDFS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L +IV+QWT+ YAAT ++HNE+ + + +N R+SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKAVLANIVKQWTSFYAATEEMHNEEEWAKVSDNDRLSARGIEVGHIFHFGTKYSAPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+VAAVIE+SHD GIIWP S+APF +IN+K +D+ Sbjct: 301 KVMGQDGKEHLVSMGSYGIGPSRLVAAVIEASHDENGIIWPKSIAPFDFGIINMKPNDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE +Y+ L + G D DD E+ GS+FA DL+G P Q+IVG K ++ ++VEIK Sbjct: 361 CTRACETLYSGLMQAGFDPLLDDRNERPGSKFATMDLIGLPTQIIVGPKSIAQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG+++ +++E V+N Sbjct: 421 RKTGVKKSLTVENVLN 436 >gi|13471387|ref|NP_102953.1| prolyl-tRNA synthetase [Mesorhizobium loti MAFF303099] gi|81855688|sp|Q98KS5|SYP_RHILO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|14022129|dbj|BAB48739.1| proline-tRNA ligase [Mesorhizobium loti MAFF303099] Length = 442 Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust. Identities = 268/443 (60%), Positives = 342/443 (77%), Gaps = 4/443 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENPR+AEI SH+LMLR GMI Q +G +SWLPLG++ LD V IIREE Sbjct: 1 MRLSRYFLPILKENPREAEIVSHRLMLRAGMIRQQGQGSFSWLPLGKRVLDKVCQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PT+QSADLW ESGRY+ YGKEMLR+ DR D+ M+YGPT+EE++T+IFR+ Sbjct: 61 QNRAGALEILMPTIQSADLWRESGRYNDYGKEMLRIKDRQDRDMLYGPTNEEMVTEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG++ +YN+MFVS Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDFEGARSAYNRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LADTGE+QVFC +D++ +P NTDF Sbjct: 181 YLRTFTRMGLQAIPMRADTGPIGGDLSHEFIILADTGESQVFCHRDYLSLAVPGANTDFA 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + IV+ WT PYAAT ++H+E ++ +PE+ +VSARGIEVGHIF+FG KYS PM A Sbjct: 241 NDGEIADIVKTWTTPYAATDEMHDEAAWEKVPESDKVSARGIEVGHIFHFGEKYSKPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKDH+ GSYGIG R+VAA+IE+SHD GIIWPD+VAPF I LIN+K D Sbjct: 301 KVTGPDGKDHFASGGSYGIGPSRLVAAIIEASHDENGIIWPDAVAPFDIGLINMKVGDAD 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C E++ A + G DV +DD ++ G +FA ADL+G P QVIVG + V+ +VEIK+ Sbjct: 361 CDRVSEELNAAFTAAGKDVLYDDTDQRPGGKFATADLIGLPWQVIVGPRGVAAGEVEIKN 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG RE + + + A RF Sbjct: 421 RRTGERETLPIAD----AKKRFG 439 >gi|240850599|ref|YP_002971999.1| prolyl-tRNA synthetase [Bartonella grahamii as4aup] gi|240267722|gb|ACS51310.1| prolyl-tRNA synthetase [Bartonella grahamii as4aup] Length = 441 Score = 578 bits (1490), Expect = e-163, Method: Compositional matrix adjust. Identities = 265/439 (60%), Positives = 343/439 (78%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP++AEI SH+LMLR GMI Q + GIYSWLPLG+K LD V IIREE Sbjct: 1 MRLSQYFLPLLKENPKEAEIVSHRLMLRAGMIRQQTSGIYSWLPLGKKVLDKVCRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GAIE+ +PT+QSADLW ESGRYD YG EMLR+ DR + ++YGPT+EE++TDIFRS Sbjct: 61 QERAGAIEILMPTIQSADLWRESGRYDDYGLEMLRIKDRQKRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR+REFLMKDAYSFDL EGSK SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEIRPRFGVMRAREFLMKDAYSFDLDYEGSKTSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGLK+IPMRA++GPIGG+LSHEFI+LA+TGE+ +FC+K F++ +P + DF Sbjct: 181 YLRTFSRLGLKAIPMRADTGPIGGELSHEFIILAETGESAIFCNKQFLELTVPDSSIDFS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L+ IV+QWT+ YAAT ++HNE+ + + ++ R+SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKAVLDDIVKQWTSFYAATEEMHNEEEWAKVSDHNRLSARGIEVGHIFHFGTKYSAPMEA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP S+APF +IN+K+ D+ Sbjct: 301 KVMGQDGKEHVVSMGSYGIGPSRLVAAAIEASHDENGIIWPKSMAPFDFGIINMKSDDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE +Y L + G D DD E+ GS+FA DL+G P Q+IVG ++ ++VEIK Sbjct: 361 CTKACEFLYQGLKEAGFDPLLDDRNERPGSKFATMDLIGLPTQIIVGPNSIAQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG+++ + +E+V++ S Sbjct: 421 RKTGVKKSLKVEDVLSQLS 439 >gi|154248383|ref|YP_001419341.1| prolyl-tRNA synthetase [Xanthobacter autotrophicus Py2] gi|226701431|sp|A7INT8|SYP_XANP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|154162468|gb|ABS69684.1| prolyl-tRNA synthetase [Xanthobacter autotrophicus Py2] Length = 440 Score = 578 bits (1489), Expect = e-163, Method: Compositional matrix adjust. Identities = 262/427 (61%), Positives = 337/427 (78%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q S GIY+WLP G + L+ V IIREE Sbjct: 1 MRLSRYFLPILREVPKEAEIVSHRLMLRAGMIRQESAGIYAWLPFGLRVLNKVCNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GAIEM +PT+QSADLW ESGRYD YGKEMLR+ DR+++ M++GPT+EE++T+I R+ Sbjct: 61 QNRSGAIEMLMPTIQSADLWRESGRYDDYGKEMLRIKDRHEREMLFGPTNEEMITEIVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP Y IQ KFRDE+RPRFGV RSREFLMKDAYSFDL G++HSYNKMFV+ Sbjct: 121 YVKSYKALPLNLYHIQWKFRDEVRPRFGVYRSREFLMKDAYSFDLDAAGARHSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPM A++GPIGG+LSHEFI+LA TGE++VFC D+++ PS + +FD Sbjct: 181 YLRTFARMGLKAIPMVADTGPIGGNLSHEFIILASTGESEVFCHGDYLEMAPPSADVNFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L S+ ++WT YAATS+ H+E F ++PE R++ARGIEVGHIFYFGTKYS P A Sbjct: 241 DAAGLQSVFDRWTELYAATSEKHDEAAFAAIPEASRMAARGIEVGHIFYFGTKYSEPFGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GADG +H + MGSYGIG R+VAA+IE+SHD GIIWPD+VAPF++ ++N+KA D Sbjct: 301 KVLGADGAEHTIHMGSYGIGPSRLVAAMIEASHDDNGIIWPDAVAPFQVGILNLKAGDST 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACEK+YA L+ G DV +DD E+ G++FA ADL+G P Q++VG K ++D KVE+K Sbjct: 361 TGAACEKLYAELTAAGYDVLYDDTEERAGAKFATADLIGLPWQILVGPKGLADGKVELKR 420 Query: 421 RLTGIRE 427 R+ G RE Sbjct: 421 RVDGSRE 427 >gi|323139097|ref|ZP_08074155.1| prolyl-tRNA synthetase [Methylocystis sp. ATCC 49242] gi|322395661|gb|EFX98204.1| prolyl-tRNA synthetase [Methylocystis sp. ATCC 49242] Length = 447 Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust. Identities = 263/435 (60%), Positives = 338/435 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR G+I Q S GIY+WLPLG K L+N+ IIREE Sbjct: 1 MRLSRYFLPILRETPKEAEIVSHRLMLRAGLIRQESAGIYAWLPLGLKVLNNITRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE +PT+QSADLW ESGRYD+YGKEMLR+ DR+D+ M++GPT+EE++T+IFR+ Sbjct: 61 QNRAGAIECLMPTIQSADLWRESGRYDAYGKEMLRITDRHDREMLFGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDLT E +HSYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLTAEAGRHSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL +IPM AESGPIGG+LSHEFI+LA+TGE++VFC KDF+ F P N DFD Sbjct: 181 YLRTFARMGLTAIPMAAESGPIGGNLSHEFIILAETGESEVFCHKDFLSFAPPPANVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +L IV +WT+ YAATS++H+ ++++PE RVSARGIEVGHIFYFGTKYS PM A Sbjct: 241 DAPALEEIVGKWTSRYAATSEMHDAAAYEAVPEASRVSARGIEVGHIFYFGTKYSEPMKA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+ VQMGSYGIG R+VAA+IE+ HD GI+WP+ VAPF + + ++K D Sbjct: 301 VVNGPDGKEVVVQMGSYGIGPSRLVAAIIEAGHDEAGIVWPEQVAPFHVGVADLKVGDAN 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + +L G DV DD E+ G++FA DL+G P Q++VG K +++ +VE+K Sbjct: 361 TGRVCGDLVQQLENAGLDVLHDDRDERPGAKFATLDLIGLPWQILVGPKGLAEGRVEVKR 420 Query: 421 RLTGIREDMSLEEVI 435 R TG RE +S E+V+ Sbjct: 421 RRTGERELLSPEDVV 435 >gi|163868357|ref|YP_001609566.1| prolyl-tRNA synthetase [Bartonella tribocorum CIP 105476] gi|189083488|sp|A9IUL1|SYP_BART1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|161018013|emb|CAK01571.1| Prolyl-tRNA synthetase [Bartonella tribocorum CIP 105476] Length = 441 Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust. Identities = 267/439 (60%), Positives = 338/439 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP++AEI SH+ MLR GMI Q + GIYSWLPLG+K LD V IIREE Sbjct: 1 MRLSQYFLPLLKENPKEAEIVSHRFMLRAGMIRQQTSGIYSWLPLGKKVLDKVCKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GAIE+ +PT+QSADLW ESGRYD YG EMLR+ DR + ++YGPT+EE++TDIFRS Sbjct: 61 QERAGAIEILMPTIQSADLWRESGRYDDYGLEMLRIKDRQKRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR+REFLMKDAYSFDL EGSK SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEIRPRFGVMRAREFLMKDAYSFDLDYEGSKTSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGLK+IPMRA++GPIGG LSHEFI+LA+TGE+ +FC K F++ +P+ + DF Sbjct: 181 YLRTFSRLGLKAIPMRADTGPIGGKLSHEFIILAETGESAIFCDKQFLELSVPNSSIDFS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L+ V+QWT+ YAAT ++HNE+ + L E R+SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKAVLDDTVKQWTSFYAATEEMHNEEEWARLSEENRLSARGIEVGHIFHFGTKYSAPMEA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+VAA IE+SHD KGIIWP S+APF +IN+K D+ Sbjct: 301 KVMGQDGKEHVVSMGSYGIGPSRLVAAAIEASHDEKGIIWPKSMAPFDFGIINMKPDDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE +Y L G D F DD E+ GS+FA DL+G P Q+IVG ++ ++VEIK Sbjct: 361 CTQACEFLYQGLKDAGFDPFLDDRNERPGSKFATMDLIGLPTQIIVGPNSIAHNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG ++ + +E+V++ S Sbjct: 421 RKTGAKKSLKVEDVLSQLS 439 >gi|319783000|ref|YP_004142476.1| prolyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168888|gb|ADV12426.1| prolyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 442 Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust. Identities = 266/443 (60%), Positives = 343/443 (77%), Gaps = 4/443 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENPR+AEI SH+LMLR GMI Q +G +SWLPLG++ LD V IIREE Sbjct: 1 MRLSRYFLPILKENPREAEIVSHRLMLRAGMIRQQGQGSFSWLPLGKRVLDKVCRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA+E+ +PT+QSADLW ESGRYD YGKEMLR+ DR D+ M+YGPT+EEV+T+I R+ Sbjct: 61 QDRAGALEILMPTIQSADLWRESGRYDDYGKEMLRIKDRQDRDMLYGPTNEEVVTEIVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG++ +YN+MFVS Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDFEGARAAYNRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LADTGE+QV+C +D++ +P NTDF Sbjct: 181 YLRTFTRMGLQAIPMRADTGPIGGDLSHEFIILADTGESQVYCHRDYLALDVPGANTDFA 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + IV+ WT PYAAT ++H+E ++ + E+ +VSARGIEVGHIF+FG KYS PM A Sbjct: 241 NDAEIADIVKTWTTPYAATDEMHDEAAWEKIGESDKVSARGIEVGHIFHFGDKYSKPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKDH+V GSYGIG R+VAA+IE+SHD GIIWP++VAPF I LIN+KA D Sbjct: 301 KVTGPDGKDHFVSGGSYGIGPSRLVAAIIEASHDDNGIIWPEAVAPFDIGLINMKAGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C C++++A G DV +DD ++ G +FA ADL+G P QVIVG + V+ ++EIK+ Sbjct: 361 CDGVCDELHAAFVAAGKDVLYDDTDQRPGGKFATADLIGLPWQVIVGPRGVAAGEIEIKN 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG RE + + + A RF Sbjct: 421 RKTGERETLPIAD----AKKRFG 439 >gi|49475642|ref|YP_033683.1| prolyl-tRNA synthetase [Bartonella henselae str. Houston-1] gi|81827712|sp|Q6G3A4|SYP_BARHE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|49238449|emb|CAF27677.1| Prolyl-tRNA synthetase [Bartonella henselae str. Houston-1] Length = 441 Score = 575 bits (1482), Expect = e-162, Method: Compositional matrix adjust. Identities = 269/439 (61%), Positives = 339/439 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP++AEI SH+LMLR GMI Q + GIYSWLPLG+K LD + IIREE Sbjct: 1 MRLSQYFLPLLKENPKEAEIISHRLMLRAGMIRQQTSGIYSWLPLGKKVLDKICKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GAIE+ +PT+QSADLW ES RYD YG EMLR+ DR + ++YGPT+EE++TDIFRS Sbjct: 61 QERAGAIEILMPTIQSADLWRESDRYDDYGLEMLRIKDRQKRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EGSK SYN+MFV+ Sbjct: 121 YIRSYKDLPLNLYHIQWKFRDEIRPRFGVMRSREFLMKDAYSFDLDYEGSKISYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F LGLK+IPMRA++GPIGG LSHEFI+LA+TGE+ +FC K F++ +P + DF Sbjct: 181 YLRTFSCLGLKAIPMRADTGPIGGKLSHEFIILAETGESAIFCDKHFLELTVPDSSIDFS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L +IV+QWT+ YAAT ++H+E+ + + +N R+SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKAILANIVKQWTSFYAATEEMHDEEEWAKISDNNRLSARGIEVGHIFHFGTKYSAPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+VAAVIE+SHD GIIWP S+APF +IN+K D+ Sbjct: 301 KVMGQDGKEHLVSMGSYGIGPSRLVAAVIEASHDENGIIWPKSIAPFDFGIINMKPDDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE +Y L G D DD E+ GS+FA DL+G P Q+IVG K V+ ++VEIK Sbjct: 361 CTHACETLYKGLRYAGFDPLLDDRNERPGSKFATMDLIGLPTQIIVGPKSVAQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TGI++ +++E V+N S Sbjct: 421 RKTGIKKSLTVENVLNQFS 439 >gi|170742529|ref|YP_001771184.1| prolyl-tRNA synthetase [Methylobacterium sp. 4-46] gi|226701312|sp|B0ULM2|SYP_METS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|168196803|gb|ACA18750.1| prolyl-tRNA synthetase [Methylobacterium sp. 4-46] Length = 444 Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust. Identities = 257/430 (59%), Positives = 341/430 (79%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V +IR E Sbjct: 1 MRLSRYFLPILRETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLNRVVEVIRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R+GAIE+ +PT+QSA+LW ESGRY++YGKEMLR+ DR+++ M++GPT+EE++T IFRS Sbjct: 61 QDRSGAIELLMPTIQSAELWRESGRYEAYGKEMLRIRDRHEREMLFGPTNEEMITAIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY++LP + Y IQ KFRDE+RPRFG MRSREFLMKDAYSFDL G++H+YNKMFV+ Sbjct: 121 AVRSYKDLPKSLYHIQWKFRDEVRPRFGTMRSREFLMKDAYSFDLDEAGARHAYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGLK+IPMRAE+GPIGG+LSHEFI+LA TGE++V+C + ++DFPIP +TDFD Sbjct: 181 YLRTFARLGLKAIPMRAETGPIGGNLSHEFIILAQTGESEVYCDRAYLDFPIPPGSTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +L + V+ WT+ YAATS++H + F ++PE R++ARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAALQATVDHWTSRYAATSEMHEPERFAAVPEEARMAARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG++ V MGSYGIG R+VAA+IE+SHD GI+WPD+VAPF + L+N+K D Sbjct: 301 RVTGPDGQERPVHMGSYGIGPSRLVAAIIEASHDEAGIVWPDAVAPFDVGLLNLKTGDIA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC +I +L G V +DD E+ G++FA ADL+G P QVIVG K +++ +VE+K Sbjct: 361 TDAACARIQEQLEAAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGQVELKR 420 Query: 421 RLTGIREDMS 430 R TG RE ++ Sbjct: 421 RATGERETVA 430 >gi|220924023|ref|YP_002499325.1| prolyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] gi|254782908|sp|B8IUW4|SYP_METNO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219948630|gb|ACL59022.1| prolyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] Length = 443 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 257/434 (59%), Positives = 339/434 (78%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V +IR E Sbjct: 1 MRLSRYFLPILRETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLNRVTEVIRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R+GAIE+ +PT+QSA+LW ESGRY++YGKEMLR+ DR+++ M++GPT+EE++T IFRS Sbjct: 61 QDRSGAIELLMPTIQSAELWRESGRYEAYGKEMLRIRDRHEREMLFGPTNEEMITAIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY++LP Y IQ KFRDE+RPRFG MRSREFLMKDAYSFDL G++H+YNKMFV+ Sbjct: 121 AVRSYKDLPKNLYHIQWKFRDEVRPRFGTMRSREFLMKDAYSFDLDEAGARHAYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGLK+IPMRAE+GPIGG+LSHEFI+LA TGE++VFC + ++ FPIP + DFD Sbjct: 181 YLRTFARLGLKAIPMRAETGPIGGNLSHEFIILAQTGESEVFCDRAYLGFPIPPASIDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +L + V+ WT+ YAATS++H F+++PE R++ARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAALQATVDHWTSRYAATSEMHEPAAFEAVPEEARMAARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG++ V MGSYGIG R+VAA+IE+SHD GI+WPDSVAPF ++L+N+K D Sbjct: 301 RVTGPDGQERPVHMGSYGIGPSRLVAAIIEASHDEAGIVWPDSVAPFDVALLNLKVGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC K+ L G V DD E+ G++FA ADL+G P QVIVG K +++ +E+K Sbjct: 361 TDAACAKLQEELEAAGLTVLTDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGTIELKR 420 Query: 421 RLTGIREDMSLEEV 434 R TG RE ++++ V Sbjct: 421 RATGEREIVAVDAV 434 >gi|254713929|ref|ZP_05175740.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1] gi|254717013|ref|ZP_05178824.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261218820|ref|ZP_05933101.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261321681|ref|ZP_05960878.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1] gi|260923909|gb|EEX90477.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261294371|gb|EEX97867.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1] Length = 442 Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust. Identities = 262/436 (60%), Positives = 337/436 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V AIIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + +E IN Sbjct: 421 RKTGERQSLGIEAAIN 436 >gi|319407251|emb|CBI80890.1| Prolyl-tRNA synthetase [Bartonella sp. 1-1C] Length = 441 Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust. Identities = 264/443 (59%), Positives = 343/443 (77%), Gaps = 4/443 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E+P++AE+ SH+ MLR GM+ Q + GIYSWLPLG+K LD + IIREE Sbjct: 1 MRLSQYFLPILKESPKEAEVISHRFMLRAGMVRQQTSGIYSWLPLGKKVLDKICKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PT+QSADLW ES RY+ YG EMLR+ DR D+ ++YGPT+EE++TDIFRS Sbjct: 61 QERAGALEILMPTIQSADLWRESERYNDYGLEMLRIRDRQDRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR+REFLMKDAYSFDL +K SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEIRPRFGVMRAREFLMKDAYSFDLDYASAKISYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGG+LSHEFI+LA TGE+ +FC K F++F +PS + DF Sbjct: 181 YLRTFSRIGLKAIPMRADTGPIGGELSHEFIILAKTGESSIFCDKRFLEFTVPSVSIDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L IV QWT+ YAAT ++HNE+ + +P++ ++SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKDVLADIVRQWTSLYAATEEMHNEEEWSKVPDSNKLSARGIEVGHIFHFGTKYSAPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H+V MGSYGIG R+VAAVIESSHD GIIWP S+APF +IN+K D+ Sbjct: 301 KVMGQDGKEHFVSMGSYGIGPSRLVAAVIESSHDEHGIIWPKSIAPFDFGIINMKPDDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y L + G D DD GE+ GS+FA DL+G P+Q+I+G K + ++VEIK Sbjct: 361 CSYICETLYQELIRRGFDPLLDDTGERPGSKFATMDLIGLPVQMIIGPKNATQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG+RE +++E V+N RFS Sbjct: 421 RKTGLREVLTVEAVLN----RFS 439 >gi|163850499|ref|YP_001638542.1| prolyl-tRNA synthetase [Methylobacterium extorquens PA1] gi|226701309|sp|A9W1L5|SYP_METEP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|163662104|gb|ABY29471.1| prolyl-tRNA synthetase [Methylobacterium extorquens PA1] Length = 441 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 255/429 (59%), Positives = 332/429 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V ++R E Sbjct: 1 MRLSRYFLPILRETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLNKVCDVVRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PT+Q+ADLW ESGRY++YGKEMLRL DR+++ ++YGPT EEV+T+IFR+ Sbjct: 61 QDRAGAIEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHERELLYGPTAEEVVTEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY++LP YQI KFRDE+RPRFG MRSREFLMKD YSFD+ ++HSYNK+FVS Sbjct: 121 STRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDIDQAAARHSYNKVFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGGDLSHEFI+LA TGE++VFC + ++D P+P + DFD Sbjct: 181 YLRTFERLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDMPVPPPSVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +V+ WT+ YAAT ++H+E +F +PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAGLQGVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + V MGSYGIG R+VAA IE+SHD GIIWPD++APF ++LIN+K D Sbjct: 301 VVTGPDGSERPVHMGSYGIGPSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDGA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +I A L G V +DD E+ G++FA ADL+G P QVIVG K +++ K+E+K Sbjct: 361 CDTACAEIQAALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKR 420 Query: 421 RLTGIREDM 429 R +G RE + Sbjct: 421 RASGERETL 429 >gi|240137564|ref|YP_002962035.1| proline-tRNA ligase [Methylobacterium extorquens AM1] gi|240007532|gb|ACS38758.1| proline-tRNA ligase [Methylobacterium extorquens AM1] Length = 442 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 255/429 (59%), Positives = 332/429 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V ++R E Sbjct: 2 MRLSRYFLPILRETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLNKVCDVVRAE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PT+Q+ADLW ESGRY++YGKEMLRL DR+++ ++YGPT EEV+T+IFR+ Sbjct: 62 QDRAGAIEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHERELLYGPTAEEVVTEIFRA 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY++LP YQI KFRDE+RPRFG MRSREFLMKD YSFD+ ++HSYNK+FVS Sbjct: 122 STRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDIDQAAARHSYNKVFVS 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGGDLSHEFI+LA TGE++VFC + ++D P+P + DFD Sbjct: 182 YLRTFERLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDMPVPPPSVDFD 241 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +V+ WT+ YAAT ++H+E +F +PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 242 DVAGLQGVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKA 301 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + V MGSYGIG R+VAA IE+SHD GIIWPD++APF ++LIN+K D Sbjct: 302 VVTGPDGSERPVHMGSYGIGPSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDGA 361 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +I A L G V +DD E+ G++FA ADL+G P QVIVG K +++ K+E+K Sbjct: 362 CDTACAEIQAALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKR 421 Query: 421 RLTGIREDM 429 R +G RE + Sbjct: 422 RASGERETL 430 >gi|225627317|ref|ZP_03785354.1| prolyl-tRNA synthetase [Brucella ceti str. Cudo] gi|225617322|gb|EEH14367.1| prolyl-tRNA synthetase [Brucella ceti str. Cudo] Length = 445 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 261/436 (59%), Positives = 336/436 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 4 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 64 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 124 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 184 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 244 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 303 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 304 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 363 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 364 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 423 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + +E IN Sbjct: 424 RKTGERQSLGIEAAIN 439 >gi|254560035|ref|YP_003067130.1| proline-tRNA ligase [Methylobacterium extorquens DM4] gi|254267313|emb|CAX23145.1| proline-tRNA ligase [Methylobacterium extorquens DM4] Length = 442 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 255/429 (59%), Positives = 332/429 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V ++R E Sbjct: 2 MRLSRYFLPILRETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLNKVCDVVRAE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PT+Q+ADLW ESGRY++YGKEMLRL DR+++ ++YGPT EEV+T+IFR+ Sbjct: 62 QDRAGAIEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHERELLYGPTAEEVVTEIFRA 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY++LP YQI KFRDE+RPRFG MRSREFLMKD YSFD+ ++HSYNK+FVS Sbjct: 122 STRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDIDQAAARHSYNKVFVS 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGGDLSHEFI+LA TGE++VFC + ++D P+P + DFD Sbjct: 182 YLRTFERLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDMPVPPPSVDFD 241 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +V+ WT+ YAAT ++H+E +F +PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 242 DVAGLQGVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKA 301 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + V MGSYGIG R+VAA IE+SHD GIIWPD++APF ++LIN+K D Sbjct: 302 VVTGPDGSERPVHMGSYGIGPSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDGA 361 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +I A L G V +DD E+ G++FA ADL+G P QVIVG K +++ K+E+K Sbjct: 362 CDAACAEIQAALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKR 421 Query: 421 RLTGIREDM 429 R +G RE + Sbjct: 422 RASGERETL 430 >gi|153009733|ref|YP_001370948.1| prolyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] gi|166980136|sp|A6X1L5|SYP_OCHA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|151561621|gb|ABS15119.1| prolyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] Length = 442 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 264/436 (60%), Positives = 336/436 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCDIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQERDMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QVFC K ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVFCDKAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVNRWTTPYAATDEMHDEADWSKVKPEDQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+ HD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEAFHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EKIY L+ G D DD ++ G++FA DL+G P QVIVG + V+ +VEIK Sbjct: 361 CDAVSEKIYEALTNAGVDPLLDDTDDRPGAKFATMDLIGLPTQVIVGPRGVAAGEVEIKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ +S+E IN Sbjct: 421 RKTGERQSLSVEAAIN 436 >gi|218529196|ref|YP_002420012.1| prolyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] gi|254782907|sp|B7KPK1|SYP_METC4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218521499|gb|ACK82084.1| prolyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] Length = 441 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 255/429 (59%), Positives = 332/429 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V ++R E Sbjct: 1 MRLSRYFLPILRETPKEAEIISHRLMLRAGMIRQEAAGIYAWLPLGLRVLNKVCDVVRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PT+Q+ADLW ESGRY++YGKEMLRL DR+++ ++YGPT EEV+T+IFR+ Sbjct: 61 QDRAGAIEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHERELLYGPTAEEVVTEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY++LP YQI KFRDE+RPRFG MRSREFLMKD YSFD+ ++HSYNK+FVS Sbjct: 121 STRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDIDQAAARHSYNKVFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGGDLSHEFI+LA TGE++VFC + ++D P+P + DFD Sbjct: 181 YLRTFERLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDMPVPPPSVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +V+ WT+ YAAT ++H+E +F +PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAGLQGVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + V MGSYGIG R+VAA IE+SHD GIIWPD++APF ++LIN+K D Sbjct: 301 VVTGPDGSERPVHMGSYGIGPSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDGA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +I A L G V +DD E+ G++FA ADL+G P QVIVG K +++ K+E+K Sbjct: 361 CDTACAEIQAALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKR 420 Query: 421 RLTGIREDM 429 R +G RE + Sbjct: 421 RASGERETL 429 >gi|163843095|ref|YP_001627499.1| prolyl-tRNA synthetase [Brucella suis ATCC 23445] gi|254706964|ref|ZP_05168792.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|254709928|ref|ZP_05171739.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|256031421|ref|ZP_05445035.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|256159542|ref|ZP_05457310.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1] gi|256254829|ref|ZP_05460365.1| prolyl-tRNA synthetase [Brucella ceti B1/94] gi|260168555|ref|ZP_05755366.1| prolyl-tRNA synthetase [Brucella sp. F5/99] gi|261222010|ref|ZP_05936291.1| prolyl-tRNA synthetase [Brucella ceti B1/94] gi|261314427|ref|ZP_05953624.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261317474|ref|ZP_05956671.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261758028|ref|ZP_06001737.1| prolyl-tRNA synthetase [Brucella sp. F5/99] gi|265988510|ref|ZP_06101067.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|265997974|ref|ZP_06110531.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1] gi|189083490|sp|B0CLE9|SYP_BRUSI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|163673818|gb|ABY37929.1| prolyl-tRNA synthetase [Brucella suis ATCC 23445] gi|260920594|gb|EEX87247.1| prolyl-tRNA synthetase [Brucella ceti B1/94] gi|261296697|gb|EEY00194.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261303453|gb|EEY06950.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261738012|gb|EEY26008.1| prolyl-tRNA synthetase [Brucella sp. F5/99] gi|262552442|gb|EEZ08432.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1] gi|264660707|gb|EEZ30968.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] Length = 442 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 261/436 (59%), Positives = 336/436 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + +E IN Sbjct: 421 RKTGERQSLGIEAAIN 436 >gi|254718929|ref|ZP_05180740.1| prolyl-tRNA synthetase [Brucella sp. 83/13] gi|265983916|ref|ZP_06096651.1| prolyl-tRNA synthetase [Brucella sp. 83/13] gi|306838840|ref|ZP_07471671.1| prolyl-tRNA synthetase [Brucella sp. NF 2653] gi|264662508|gb|EEZ32769.1| prolyl-tRNA synthetase [Brucella sp. 83/13] gi|306406124|gb|EFM62372.1| prolyl-tRNA synthetase [Brucella sp. NF 2653] Length = 442 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 260/436 (59%), Positives = 336/436 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GI+WP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIVWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + +E IN Sbjct: 421 RKTGERQSLGIEAAIN 436 >gi|90417824|ref|ZP_01225736.1| prolyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] gi|90337496|gb|EAS51147.1| prolyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] Length = 440 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 260/435 (59%), Positives = 335/435 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + G+YS+LPLG++ LD V AIIREE Sbjct: 1 MRLSRYFLPILKETPKEAEIVSHRLMLRAGMIRQQAAGLYSFLPLGKRVLDKVCAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GAIE+ +PT+QSADLW ESGRY+ YGKEMLR+ DR+ + ++YGPT+EE++TDIFRS Sbjct: 61 QNRSGAIELLMPTIQSADLWRESGRYEDYGKEMLRIEDRHGRDLLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++++Y++LP Y +Q KFRDE+RPRFGVMRSREFLMKDAYSFDL + SK +Y++MFV+ Sbjct: 121 YVRTYKDLPLNLYHLQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYDNSKIAYDRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R GLK+IPMRA++GPIGG+LSHEFIVLA TGE++VFC +D++D +P E DFD Sbjct: 181 YLRTFERCGLKAIPMRADTGPIGGELSHEFIVLASTGESEVFCHRDYLDLAVPCEGVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L IV+ WT PYAAT ++H +D L E+ +++ARGIEVGHIF+FGTKYS PM A Sbjct: 241 DAAGLAEIVKAWTTPYAATDEMHETATWDQLAEDDKLAARGIEVGHIFHFGTKYSEPMKA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKD V MGSYGIG R++AA+IE+SHD GIIWP SVAPF + LIN+K D Sbjct: 301 VVTGPDGKDVPVHMGSYGIGPSRLLAAIIEASHDENGIIWPKSVAPFDVGLINMKPGDAD 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE +Y ++ G DV +DD + G++FA DL+G P+QVIVG + + EIK Sbjct: 361 CDAACEDLYRQMQAAGIDVLYDDQDTRAGAKFASMDLIGLPMQVIVGPRGAKAGEAEIKL 420 Query: 421 RLTGIREDMSLEEVI 435 R TG R+ + L V+ Sbjct: 421 RATGERQSLPLSSVL 435 >gi|239831704|ref|ZP_04680033.1| prolyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] gi|239823971|gb|EEQ95539.1| prolyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] Length = 446 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 262/436 (60%), Positives = 338/436 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIY+WLP+G K L+ V IIREE Sbjct: 5 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYAWLPIGLKVLNKVCDIIREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 65 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQERDMLFGPTNEEMVTDIFRS 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 125 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QVFC K ++D +P +TDF Sbjct: 185 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVFCDKAYLDLAVPGADTDFR 244 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV++WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 245 NDAQLTDIVQRWTTPYAATDEMHDEADWAKVKPEDQVSARGIEVGHIFHFGTKYSEPMGA 304 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+ HD GIIWP ++APF ++N+K D+ Sbjct: 305 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEAFHDDAGIIWPKAIAPFGAGIVNMKPGDEG 364 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD ++ G++FA DL+G P QVIVG + V+ +VEIK Sbjct: 365 CDAVSEKLYEALTNAGVDPLLDDTDDRPGAKFATMDLIGLPTQVIVGPRGVAAGEVEIKD 424 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+++S+E IN Sbjct: 425 RKTGERQNLSVEAAIN 440 >gi|254689076|ref|ZP_05152330.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|254693559|ref|ZP_05155387.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|256257325|ref|ZP_05462861.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260754574|ref|ZP_05866922.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260883601|ref|ZP_05895215.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|261213824|ref|ZP_05928105.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|297248174|ref|ZP_06931892.1| prolyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] gi|260674682|gb|EEX61503.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260873129|gb|EEX80198.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260915431|gb|EEX82292.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|297175343|gb|EFH34690.1| prolyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] Length = 442 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 261/436 (59%), Positives = 335/436 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + +E IN Sbjct: 421 RKTGERQSLGIEAAIN 436 >gi|256060932|ref|ZP_05451090.1| prolyl-tRNA synthetase [Brucella neotomae 5K33] gi|261324932|ref|ZP_05964129.1| prolyl-tRNA synthetase [Brucella neotomae 5K33] gi|261300912|gb|EEY04409.1| prolyl-tRNA synthetase [Brucella neotomae 5K33] Length = 442 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 261/436 (59%), Positives = 335/436 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAGTGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKLGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + +E IN Sbjct: 421 RKTGERQSLGIEAAIN 436 >gi|114707388|ref|ZP_01440285.1| prolyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] gi|114537269|gb|EAU40396.1| prolyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] Length = 440 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 261/435 (60%), Positives = 336/435 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E PR+AEI SH+LMLR GMI Q + G+Y++LPLG K L+ V AIIREE Sbjct: 1 MRLSRYFLPILKETPREAEIVSHQLMLRAGMIRQQAAGLYTFLPLGLKVLNKVCAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YG+EMLR+ DR+ + ++YGPT+EE++TDIFRS Sbjct: 61 QNRAGANELLMPTIQSADLWRESGRYDAYGEEMLRITDRHKRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SYR+LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E ++ +Y++MFVS Sbjct: 121 YVRSYRSLPLNLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDFESAQTAYHRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R GL++IPMRA++GPIGG+LSHEFI+LA TGE++VFC +D++ IPSE DFD Sbjct: 181 YLRTFDRCGLQAIPMRADTGPIGGNLSHEFIILASTGESEVFCHRDYLGMEIPSEAIDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L SIVE+WT PYAAT ++H+E ++++P N +++ARGIEVGHIFYFGTKYS M+A Sbjct: 241 DAGQLASIVEKWTTPYAATDEMHDETAWNTVPANHQLNARGIEVGHIFYFGTKYSAAMNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKD V MGSYGIG R+VAA IE+ HD GIIWP S+APF + LIN+K D Sbjct: 301 AVTGPDGKDVPVHMGSYGIGPSRLVAAAIEAFHDEAGIIWPRSIAPFDVGLINMKPGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACEKIY + + G DV +DD + G +FA DL+G P QVI+G + + E+K Sbjct: 361 CDAACEKIYEEMKQAGIDVLYDDQEGRAGGKFATMDLIGLPTQVIIGPRGAKSGEAEVKD 420 Query: 421 RLTGIREDMSLEEVI 435 R +G RE + +++VI Sbjct: 421 RASGARETIPMDQVI 435 >gi|254701588|ref|ZP_05163416.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|261752141|ref|ZP_05995850.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|261741894|gb|EEY29820.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513] Length = 442 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 261/436 (59%), Positives = 335/436 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKFYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + +E IN Sbjct: 421 RKTGERQSLGIEAAIN 436 >gi|237815257|ref|ZP_04594255.1| prolyl-tRNA synthetase [Brucella abortus str. 2308 A] gi|237790094|gb|EEP64304.1| prolyl-tRNA synthetase [Brucella abortus str. 2308 A] Length = 445 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 260/436 (59%), Positives = 335/436 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 4 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 64 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 124 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 184 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 244 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 303 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 304 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMKPGDEG 363 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 364 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 423 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + ++ IN Sbjct: 424 RKTGERQSLGIKAAIN 439 >gi|148560203|ref|YP_001258799.1| prolyl-tRNA synthetase [Brucella ovis ATCC 25840] gi|166980104|sp|A5VQ02|SYP_BRUO2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148371460|gb|ABQ61439.1| prolyl-tRNA synthetase [Brucella ovis ATCC 25840] Length = 442 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 261/436 (59%), Positives = 336/436 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVFMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + +E IN Sbjct: 421 RKTGERQSLDIEAAIN 436 >gi|306843758|ref|ZP_07476357.1| prolyl-tRNA synthetase [Brucella sp. BO1] gi|306275949|gb|EFM57662.1| prolyl-tRNA synthetase [Brucella sp. BO1] Length = 442 Score = 568 bits (1464), Expect = e-160, Method: Compositional matrix adjust. Identities = 259/436 (59%), Positives = 336/436 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + +++ +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLNLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GI+WP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIVWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + +E IN Sbjct: 421 RKTGERQSLGIEAAIN 436 >gi|161618786|ref|YP_001592673.1| prolyl-tRNA synthetase [Brucella canis ATCC 23365] gi|254704135|ref|ZP_05165963.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|260566616|ref|ZP_05837086.1| prolyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261754801|ref|ZP_05998510.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|189083489|sp|A9MAJ9|SYP_BRUC2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|161335597|gb|ABX61902.1| prolyl-tRNA synthetase [Brucella canis ATCC 23365] gi|260156134|gb|EEW91214.1| prolyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261744554|gb|EEY32480.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686] Length = 442 Score = 568 bits (1464), Expect = e-160, Method: Compositional matrix adjust. Identities = 260/436 (59%), Positives = 335/436 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R G R+ + +E IN Sbjct: 421 RKMGERQSLGIEAAIN 436 >gi|328543706|ref|YP_004303815.1| Prolyl-tRNA synthetase [polymorphum gilvum SL003B-26A1] gi|326413449|gb|ADZ70512.1| Prolyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1] Length = 442 Score = 568 bits (1463), Expect = e-160, Method: Compositional matrix adjust. Identities = 255/436 (58%), Positives = 333/436 (76%), Gaps = 2/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+E P++AEI SH+LMLR GMI Q S GIYSWLPLG + L + I+ EE Sbjct: 1 MRLSRFFLPILKETPKEAEIVSHRLMLRAGMIRQQSAGIYSWLPLGFRVLRKIEKIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+++ +PT+Q ADLW ESGRYD+YGKEMLR+ DR+++ M+YGPT+EE++T+IFRS Sbjct: 61 QARAGAVQLLMPTIQPADLWRESGRYDAYGKEMLRITDRHEREMLYGPTNEEMITEIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFG+MR REFLMKDAYSFD+ E ++H+YN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGIMRGREFLMKDAYSFDIDKEAARHAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGGD+SHEFI+LA TGE+ VFC + +D P P E+TDF Sbjct: 181 YLRTFARMGLKAIPMRADTGPIGGDMSHEFIILASTGESAVFCDRSLLDLPTPGEDTDF- 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L+ IVE WT PYAAT ++H+E F +LPE +RVSARGIEVGHIFYFGTKYS PM A Sbjct: 240 -LSDLSPIVEAWTTPYAATDEMHDETTFAALPEAERVSARGIEVGHIFYFGTKYSEPMGA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 A+G + V MGSYG+G R++ A+IE++HD GIIWP SVAPF + LIN+K D Sbjct: 299 RVMTAEGTEVPVHMGSYGVGVSRLLGALIEANHDDDGIIWPASVAPFHVGLINLKPGDAD 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC +YARL VG +V +DD+ + G++FA DL+G P Q+I G + + D VE+K Sbjct: 359 TDSACAGLYARLEAVGVEVLYDDVDTRAGAKFATMDLIGLPFQIIAGPRGLKDGVVEVKE 418 Query: 421 RLTGIREDMSLEEVIN 436 R +G RE +SLE N Sbjct: 419 RASGQRESLSLEAAFN 434 >gi|62289771|ref|YP_221564.1| prolyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82699699|ref|YP_414273.1| prolyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189024014|ref|YP_001934782.1| prolyl-tRNA synthetase [Brucella abortus S19] gi|254697210|ref|ZP_05159038.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260545481|ref|ZP_05821222.1| prolyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260761620|ref|ZP_05873963.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|81309431|sp|Q57DT1|SYP_BRUAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152174|sp|Q2YNE3|SYP_BRUA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226699122|sp|B2S561|SYP_BRUA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|62195903|gb|AAX74203.1| ProS, prolyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82615800|emb|CAJ10798.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase, class IIa:Anticodon binding domain:Prolyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189019586|gb|ACD72308.1| prolyl-tRNA synthetase [Brucella abortus S19] gi|260096888|gb|EEW80763.1| prolyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260672052|gb|EEX58873.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] Length = 442 Score = 568 bits (1463), Expect = e-160, Method: Compositional matrix adjust. Identities = 260/436 (59%), Positives = 335/436 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + ++ IN Sbjct: 421 RKTGERQSLGIKAAIN 436 >gi|17987423|ref|NP_540057.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|17983114|gb|AAL52321.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] Length = 445 Score = 568 bits (1463), Expect = e-160, Method: Compositional matrix adjust. Identities = 260/436 (59%), Positives = 334/436 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 4 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 64 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 124 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 184 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L V +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 244 NDAQLTDTVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 303 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 304 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMKPGDEG 363 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 364 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATIDLIGLPTQVIVGPRGVAAGEVEVKD 423 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + +E IN Sbjct: 424 RKTGERQSLGIEAAIN 439 >gi|225852336|ref|YP_002732569.1| prolyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|256044499|ref|ZP_05447403.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|256113355|ref|ZP_05454213.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|256264165|ref|ZP_05466697.1| prolyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|260563853|ref|ZP_05834339.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|265990923|ref|ZP_06103480.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|265994761|ref|ZP_06107318.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|114152175|sp|Q8YGL8|SYP_BRUME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782889|sp|C0RIF7|SYP_BRUMB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225640701|gb|ACO00615.1| prolyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|260153869|gb|EEW88961.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|262765874|gb|EEZ11663.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|263001707|gb|EEZ14282.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|263094383|gb|EEZ18228.1| prolyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|326408844|gb|ADZ65909.1| prolyl-tRNA synthetase [Brucella melitensis M28] gi|326538559|gb|ADZ86774.1| prolyl-tRNA synthetase [Brucella melitensis M5-90] Length = 442 Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust. Identities = 260/436 (59%), Positives = 334/436 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L V +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDTVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATIDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + +E IN Sbjct: 421 RKTGERQSLGIEAAIN 436 >gi|256369253|ref|YP_003106761.1| prolyl-tRNA synthetase [Brucella microti CCM 4915] gi|255999413|gb|ACU47812.1| prolyl-tRNA synthetase [Brucella microti CCM 4915] Length = 442 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 260/436 (59%), Positives = 335/436 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEML + DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLCIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ + +E IN Sbjct: 421 RKTGERQSLGIEAAIN 436 >gi|158423310|ref|YP_001524602.1| prolyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] gi|172047938|sp|A8I438|SYP_AZOC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|158330199|dbj|BAF87684.1| prolyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] Length = 440 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 255/434 (58%), Positives = 335/434 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++A+I SH+LMLR GMI Q S GIY+WLPLG + L+ + IIREE Sbjct: 1 MRLSRYFLPILREVPKEADIVSHRLMLRAGMIRQESAGIYAWLPLGLRVLNKICNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNRTGA+E+ +PT+QSADLW ESGRYD YGKEMLR+ DR+++ M++GPT+EE++T+I R Sbjct: 61 QNRTGAVELLMPTIQSADLWRESGRYDDYGKEMLRIKDRHERDMLFGPTNEEMITEIVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY++LP Y IQ KFRDE+RPRFGV RSREFLMKDAYSFDL EG+KHSYNKMFV+ Sbjct: 121 SIKSYKSLPLNLYHIQWKFRDEVRPRFGVYRSREFLMKDAYSFDLDAEGAKHSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPM A++GPIGG+LSHEFI+LA TGE++VFC D+++ P + +FD Sbjct: 181 YLRTFARMGLKAIPMVADTGPIGGNLSHEFIILASTGESEVFCHGDYLEMAPPPADVNFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D ++ +V WT YAAT + H+ F ++P ++++ARGIEVGHIFYFGTKYS P +A Sbjct: 241 DAAAIQQVVNDWTTLYAATEEKHDAATFAAIPAERQMAARGIEVGHIFYFGTKYSAPFNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG +H + MGSYGIG R+VAA+IE+SHD GIIWPD+VAPF++ ++N+K D Sbjct: 301 KVLGPDGAEHLIHMGSYGIGPSRLVAAMIEASHDDAGIIWPDAVAPFQVGILNLKVGDSA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC +YA+L+ G DV +DD E+ GS+FA ADL+G P Q++VG K ++D KVE+K Sbjct: 361 VDAACADLYAKLTAAGVDVLYDDTDERAGSKFATADLIGLPWQILVGPKSLADGKVELKR 420 Query: 421 RLTGIREDMSLEEV 434 R+ G RE ++ E Sbjct: 421 RVDGSRELVTPAEA 434 >gi|23501709|ref|NP_697836.1| prolyl-tRNA synthetase [Brucella suis 1330] gi|81847158|sp|Q8G197|SYP_BRUSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|23347633|gb|AAN29751.1| prolyl-tRNA synthetase [Brucella suis 1330] Length = 442 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 259/436 (59%), Positives = 334/436 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRY +YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYGAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVIN 436 R G R+ + +E IN Sbjct: 421 RKMGERQSLGIEAAIN 436 >gi|319404243|emb|CBI77836.1| Prolyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498] Length = 441 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 262/443 (59%), Positives = 341/443 (76%), Gaps = 4/443 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E+P++AE+ SH+ MLR GM+ Q + GIYSWLPLG+K LD + IIREE Sbjct: 1 MRLSQYFLPILKESPKEAEVISHRFMLRAGMVRQQTSGIYSWLPLGKKVLDKICKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PT+QSADLW ES RY+ YG EMLR+ DR D+ ++YGPT+EE++TDIFRS Sbjct: 61 QERAGALEILMPTIQSADLWRESERYNDYGLEMLRIRDRQDRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR+REFLMKDAYSFDL +K SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEIRPRFGVMRAREFLMKDAYSFDLDYASAKISYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGG+LSHEFI+LA TGE+ +FC K F++F +PS + DF Sbjct: 181 YLRTFSRVGLKAIPMRADTGPIGGELSHEFIILAKTGESSIFCDKRFLEFTVPSVSIDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L IV QWT+ YAAT ++HNE+ + + ++ ++SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKDVLADIVRQWTSLYAATEEMHNEEEWSKVSDSNKLSARGIEVGHIFHFGTKYSAPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H+V MGSYGIG R+VAAVIESSHD GIIWP S+APF +IN+K D+ Sbjct: 301 KVMGQDGKEHFVSMGSYGIGPSRLVAAVIESSHDEHGIIWPKSIAPFDFGIINMKPDDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y L + G D DD E+ GS+FA DL+G P+Q+I+G K + ++VEIK Sbjct: 361 CSYICETLYQGLIRSGFDPLLDDTSERPGSKFATMDLIGLPVQMIIGPKNATQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG+RE +++E V+N RFS Sbjct: 421 RKTGLREVLTVEAVLN----RFS 439 >gi|319408595|emb|CBI82250.1| Prolyl-tRNA synthetase [Bartonella schoenbuchensis R1] Length = 441 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 261/439 (59%), Positives = 333/439 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYF+PIL+ENP++AEI SH+LMLR GMI Q + GIYSWLPLG+K LD V IIREE Sbjct: 1 MRLSKYFIPILKENPKEAEIVSHRLMLRAGMIRQQTAGIYSWLPLGKKVLDKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q + GA+E+ +PT+QS DLW ESGRYD YG EMLR+ DR ++ ++YGPT+EE++TDIFRS Sbjct: 61 QKQAGALEILMPTIQSVDLWHESGRYDDYGFEMLRIKDRQERDLLYGPTNEEIVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL E +K SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYQIQWKFRDEIRPRFGVMRSREFLMKDAYSFDLDYESAKISYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK IP RA++GPIGG+ SHEF +LA+TGE+ +FC K F+D P + DF Sbjct: 181 YLRTFSRMGLKVIPTRADTGPIGGERSHEFTILAETGESAIFCDKQFLDINAPLFSIDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L IV+QWT YAAT ++HNE+ + +P++ ++SARGIEVGHIFYFGTKYS+PM A Sbjct: 241 DKTVLTDIVKQWTTFYAATEEMHNEEEWSKIPKSNQLSARGIEVGHIFYFGTKYSVPMEA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP +APF +IN+K D+ Sbjct: 301 KVMGKDGKEHPVFMGSYGIGPSRLVAAAIEASHDENGIIWPKPIAPFDFGIINMKPDDKK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y L + G D DD E+ G +FA+ DL+G P Q+IVG K + ++VEIK Sbjct: 361 CNHMCETLYQGLIRAGFDPLLDDRNERPGVKFAIMDLIGLPTQIIVGPKSAAQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG +E +++E V+N S Sbjct: 421 RKTGAKESLTIESVLNRLS 439 >gi|170748459|ref|YP_001754719.1| prolyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] gi|226701311|sp|B1LUL8|SYP_METRJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|170654981|gb|ACB24036.1| prolyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] Length = 441 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 254/435 (58%), Positives = 334/435 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P L+E P++AEI SH+LMLR G++ Q + GIY+WLPLG + L+ V A+IR E Sbjct: 1 MRLSRYFMPTLRETPKEAEIVSHRLMLRAGLVRQEAAGIYAWLPLGLRVLERVCAVIRRE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R+GA+E+ +PT+QSA+LW ESGRYD+YGKEMLRL DR+D+ M+YGPT EE++T+IFR+ Sbjct: 61 QDRSGAVEILMPTVQSAELWRESGRYDAYGKEMLRLKDRHDREMLYGPTAEEMVTEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY++LP YQI KFRDE+RPRFG MRSREFLMKDAYSFD G++H+YN+MFV+ Sbjct: 121 SVRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDAYSFDFDQAGARHAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F LGLK+IPMRA++GPIGGDLSHEFI+LA TGE++VFC K ++ F IP DFD Sbjct: 181 YLRTFAGLGLKAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDKAYLGFDIPPATVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +L IV+ WT+ YAAT ++H F +PE+ R++ARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAALQGIVDAWTSHYAATEEMHEPAAFAEVPEDSRMAARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + V MGSYGIG R+VAA+IE+SHD GIIWPD+VAPF ++LIN+K D Sbjct: 301 KVAGPDGIERPVHMGSYGIGPSRLVAAIIEASHDEAGIIWPDAVAPFDVALINLKVGDSA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC +I + L G V +DD E+ G++FA ADL+G P QVIVG K +++ KVE+K Sbjct: 361 TEAACAQIQSDLEAAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKVELKR 420 Query: 421 RLTGIREDMSLEEVI 435 R G RE ++ +++ Sbjct: 421 RAGGERESLATVDLL 435 >gi|319405682|emb|CBI79305.1| Prolyl-tRNA synthetase [Bartonella sp. AR 15-3] Length = 441 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 263/443 (59%), Positives = 337/443 (76%), Gaps = 4/443 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AE+ SH+ MLR GMI Q + GIYSWLPLG+K LD + IIREE Sbjct: 1 MRLSQYFLPILKENPKEAEVVSHRFMLRAGMIRQQTSGIYSWLPLGKKVLDKICKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PT+QSADLW ES RY+ YG EMLR+ DR D+ ++YGPT+EE++TDIFRS Sbjct: 61 QERIGALEILMPTIQSADLWRESNRYNDYGLEMLRIKDRQDRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR+REFLMKDAYSFDL +K SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEIRPRFGVMRAREFLMKDAYSFDLDYASAKTSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGG+LSHEFI+L++TGE+ +FC K F++F IPS + DF Sbjct: 181 YLRTFSRIGLKAIPMRADTGPIGGELSHEFIILSETGESSIFCDKRFLEFTIPSVSIDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L +V QWT+ YAAT ++HNE+ ++ + ++SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKDVLADVVRQWTSLYAATEEMHNEEEWNKVSAMNKLSARGIEVGHIFHFGTKYSAPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+ V MGSYGIG R+VAAVIESSHD GIIWP SVAPF +IN+K DQ Sbjct: 301 KIMGQDGKERLVSMGSYGIGPSRLVAAVIESSHDEHGIIWPKSVAPFDFGIINMKPDDQK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y L + G D DD E+ GS+FA DL+G P+Q+I+ K V+ ++VEIK Sbjct: 361 CSYICETLYQGLIRNGFDPLLDDTSERPGSKFATMDLIGLPVQMIISPKNVTQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG RE +++E A HRF+ Sbjct: 421 RKTGFREVLTVEA----ALHRFA 439 >gi|298291828|ref|YP_003693767.1| prolyl-tRNA synthetase [Starkeya novella DSM 506] gi|296928339|gb|ADH89148.1| prolyl-tRNA synthetase [Starkeya novella DSM 506] Length = 440 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 255/431 (59%), Positives = 334/431 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q S GIY+WLPLG++ LD + ++REE Sbjct: 1 MRLSRYFLPILREVPKEAEIVSHRLMLRAGMIRQESAGIYAWLPLGKRVLDKICNVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GAIE+ +PT+QSADLW ESGRYD YGKEMLR+ DR+++ M++GPT+EE++T+I R+ Sbjct: 61 QNRSGAIEILMPTIQSADLWRESGRYDDYGKEMLRIKDRHERDMLFGPTNEEMLTEIVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYS DL E + +YN+MFV+ Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSVDLDFESAVVAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGLK+IPM A++GPIGG+ SHEFI+LA TGE+QVFC D++ P + DF Sbjct: 181 YLRTFERLGLKAIPMVADTGPIGGNHSHEFIILASTGESQVFCHSDYLGMDTPGSDVDFQ 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +L +IV +WT+ YAAT + H+E F+++PE +R+SARGIEVGHIFYFGTKYS PM+A Sbjct: 241 DPAALQTIVNRWTSLYAATEEKHDEAAFEAIPEGQRLSARGIEVGHIFYFGTKYSEPMNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG + V MGSYGIG R+ AA+IE+SHD GIIWP+++APF++ L+N+K D Sbjct: 301 TVAGPDGVERPVHMGSYGIGPSRLAAAIIEASHDENGIIWPEAIAPFRVGLLNLKVGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE IYA L+ DV +DD E+ GS+FA ADL+G P Q+IVG K +++ VE+K Sbjct: 361 TDAACEAIYAELASRNIDVLYDDTDERPGSKFATADLIGLPWQIIVGPKGLANGMVELKR 420 Query: 421 RLTGIREDMSL 431 R G RE + + Sbjct: 421 RADGTRETLPV 431 >gi|118590019|ref|ZP_01547423.1| prolyl-tRNA synthetase [Stappia aggregata IAM 12614] gi|118437516|gb|EAV44153.1| prolyl-tRNA synthetase [Stappia aggregata IAM 12614] Length = 442 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 250/436 (57%), Positives = 332/436 (76%), Gaps = 2/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPILKETPKEAEIVSHRLMLRAGMIRQQSAGIYSWLPLGLKVLRKIERIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GAI++ +PT+QSADLW ESGRYD+YGKEMLR+ DR+++ M++GPT+EE++TDIFR Sbjct: 61 QARAGAIQLLMPTIQSADLWRESGRYDAYGKEMLRITDRHERDMLFGPTNEEMITDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E ++H+YN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDKESARHAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPM+A++GPIGGD+SHEFI+LA+TGE++VFC K ++ P P+E+TDF Sbjct: 181 YLRTFARMGLKAIPMKADTGPIGGDMSHEFIILAETGESEVFCDKSLLELPTPAEDTDF- 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L IV +WT PYAAT ++H+E F +LPE+ RVSARGIEVGHIFYFGTKYS M A Sbjct: 240 -FSDLTPIVTEWTTPYAATDEMHDEAAFGALPEDTRVSARGIEVGHIFYFGTKYSDAMGA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 A+G + V MGSYG+G R++ A+IE++HD GI+WP SVAPF + L+N+K D++ Sbjct: 299 KVATAEGTEVPVHMGSYGVGVSRLLGALIEANHDENGIVWPKSVAPFHVGLVNLKPGDEL 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CE +YA+ G +V +DD + G++FA DL+G P QV+ G + + D +E+K Sbjct: 359 TDPVCEDLYAKFEAAGIEVLYDDTDTRAGAKFATMDLIGLPFQVVAGPRGLKDGLLEVKD 418 Query: 421 RLTGIREDMSLEEVIN 436 R TG +E +S E +N Sbjct: 419 RATGEKEMLSPEATLN 434 >gi|254469374|ref|ZP_05082779.1| prolyl-tRNA synthetase [Pseudovibrio sp. JE062] gi|211961209|gb|EEA96404.1| prolyl-tRNA synthetase [Pseudovibrio sp. JE062] Length = 441 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 255/436 (58%), Positives = 334/436 (76%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q S GIY+WLPLG + L+ + I+ EE Sbjct: 1 MRLSRYFLPILKETPKEAEIVSHRLMLRAGMIRQQSAGIYAWLPLGHRVLNKIQRIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GA+++ +PT+Q ADLW ESGRYD+YGKEMLR+ DR+++ M++GPT+EE++TDIFRS Sbjct: 61 QNRSGAVQLLMPTIQPADLWRESGRYDAYGKEMLRIEDRHEREMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E S +Y +MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDKERSTEAYRRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL +IPM+A++GPIGGDLSHEFIVLA TGE++VF KD +D PIP E+TDFD Sbjct: 181 YLRTFARMGLTAIPMKADTGPIGGDLSHEFIVLASTGESEVFLDKDILDLPIPGEDTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L+ I+EQWT PYAAT ++++E F ++ E+K+VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 G--DLSGIIEQWTTPYAATDEMYDEAAFGAVAEDKKVSARGIEVGHIFHFGTKYSEPMGA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 A+GK+ VQMGSYGIG R++ A+IE+ HD GIIWP VAPF + LIN+KA + Sbjct: 299 KVMTAEGKEVPVQMGSYGIGVSRLLGAIIEACHDDDGIIWPKEVAPFHVGLINMKAGSE- 357 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + CE +YA L K G +V +DD G +FA DL+G P Q++VG + + +VE+K Sbjct: 358 CDEVCESVYAELEKAGIEVLYDDRKTSAGQKFASMDLIGLPYQLVVGPRGLKTGEVEVKD 417 Query: 421 RLTGIREDMSLEEVIN 436 R G RE ++ E +N Sbjct: 418 RAAGDREMLTPEAAVN 433 >gi|182678768|ref|YP_001832914.1| prolyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|226699120|sp|B2IDI9|SYP_BEII9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|182634651|gb|ACB95425.1| prolyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 439 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 257/437 (58%), Positives = 334/437 (76%), Gaps = 3/437 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR GMI Q + GIY+WLPLG + L V I+REE Sbjct: 1 MRLSRYFLPILRENPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGFRVLQKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +PTLQ ADLW E+GRYD+YG EMLR+ DR+++ ++YGPT+E+++T+IFR+ Sbjct: 61 MDRAGAIELLMPTLQLADLWRETGRYDAYGPEMLRIKDRHERELLYGPTNEDMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SYR+LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL EG++ SYNKMFV+ Sbjct: 121 YVRSYRDLPKILYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDLDEEGARLSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLRI+ R+GL +IPMRAE+GPIGGDLSHEFI+LADTGE+ VFC+KD +D PIP E+TD+D Sbjct: 181 YLRIYKRMGLTAIPMRAETGPIGGDLSHEFIILADTGESAVFCNKDVLDLPIPDEHTDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L+ I++QWT+ YAAT DVH+ F+S P KR+ RGIEVG +FYFG KYS PM Sbjct: 241 G--DLSPIIKQWTSLYAATEDVHDAARFESETPPEKRIERRGIEVGQVFYFGEKYSKPMR 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG + Q GSYG+G R+V A+IE+SHD GIIWP++VAPF + L N+K D Sbjct: 299 SLITGPDGSEKPFQGGSYGVGVSRLVGAIIEASHDEAGIIWPEAVAPFTVGLANLKVGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 AC +IY RL +G DV +DD ++ G +FA DL+G P Q+IVG K +++ K+E+K Sbjct: 359 ATDAACAEIYERLEALGVDVLYDDTDDRPGGKFAKLDLIGLPYQIIVGPKGLAEGKIEMK 418 Query: 420 HRLTGIREDMSLEEVIN 436 R TG RE++S+ VI Sbjct: 419 TRATGARENLSIAAVIE 435 >gi|294852177|ref|ZP_06792850.1| prolyl-tRNA synthetase [Brucella sp. NVSL 07-0026] gi|294820766|gb|EFG37765.1| prolyl-tRNA synthetase [Brucella sp. NVSL 07-0026] Length = 435 Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust. Identities = 255/429 (59%), Positives = 330/429 (76%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +PIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREEQNR GA Sbjct: 1 MPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGAN 60 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS+++SY++ Sbjct: 61 EILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRSYVRSYKD 120 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVSYLR F R Sbjct: 121 LPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFAR 180 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 +GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF + L Sbjct: 181 VGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDAQLTD 240 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A +G DG Sbjct: 241 IVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGAKVQGPDG 300 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 K+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ C EK Sbjct: 301 KEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEGCDGVSEK 360 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K R TG R+ Sbjct: 361 LYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKDRKTGERQ 420 Query: 428 DMSLEEVIN 436 + +E IN Sbjct: 421 SLGIEAAIN 429 >gi|319898898|ref|YP_004158991.1| Prolyl-tRNA synthetase [Bartonella clarridgeiae 73] gi|319402862|emb|CBI76413.1| Prolyl-tRNA synthetase [Bartonella clarridgeiae 73] Length = 442 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 257/443 (58%), Positives = 335/443 (75%), Gaps = 4/443 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AE+ SH+ MLR GM+ Q + GIYSWLPLG+K LD + IIREE Sbjct: 1 MRLSQYFLPILKENPKEAEVVSHRFMLRAGMVRQQTSGIYSWLPLGKKVLDKICKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PT+QSADLW ESGRY+ YG EMLR+ DR D+ ++YGPT+EE++TDIFRS Sbjct: 61 QERAGAVEILMPTIQSADLWRESGRYNDYGLEMLRIKDRQDRDLLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR+REFLMKDAYSFDL +K SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEIRPRFGVMRAREFLMKDAYSFDLDYASAKTSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IP+RA++GPIGG+LSHEFI+LA+TGE+ +FC K F++F +P + DF Sbjct: 181 YLRTFSRIGLKAIPVRADTGPIGGELSHEFIILAETGESSIFCDKRFLEFTVPPISIDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L IV QWT+ YAAT ++HNE+ + + N +++ARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKDILADIVRQWTSLYAATEEMHNEEEWSKVSTNNKLAARGIEVGHIFHFGTKYSAPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H + MGSYGIG R+VAA+IESSHD GIIWP + PF +IN+K D+ Sbjct: 301 KVMGQDGKEHLISMGSYGIGPSRLVAAIIESSHDEHGIIWPKPITPFDCGIINMKPDDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y RL G D DD E+ GS+FA DL+G P+Q+I+G K + ++VEIK Sbjct: 361 CSYMCETLYQRLIHGGFDPLLDDTNERPGSKFATMDLIGLPIQMIIGPKSAAQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R T RE +++E +N RFS Sbjct: 421 RKTDAREILTVEAALN----RFS 439 >gi|304391639|ref|ZP_07373581.1| prolyl-tRNA synthetase [Ahrensia sp. R2A130] gi|303295868|gb|EFL90226.1| prolyl-tRNA synthetase [Ahrensia sp. R2A130] Length = 451 Score = 555 bits (1429), Expect = e-156, Method: Compositional matrix adjust. Identities = 258/446 (57%), Positives = 342/446 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++YFLP+L+E PR+AEIASH+LMLR GMI Q S GIYSWLPLG K L V I+REE Sbjct: 1 MRLTQYFLPVLKEAPREAEIASHQLMLRAGMIKQQSAGIYSWLPLGLKVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PT+QSADLW ESGRYD YGKEMLR+ DR+++ M++GPT+EE++TDIFR+ Sbjct: 61 QNRAGAVEVLMPTIQSADLWRESGRYDDYGKEMLRIQDRHERDMLFGPTNEEMITDIFRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL + ++ +Y +MFVS Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLNADAARAAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG+K+IPMRA++GPIGGDLSHEF++LADTGE++VFC DF +P D+ Sbjct: 181 YLRTFDRLGVKAIPMRADTGPIGGDLSHEFLILADTGESEVFCHSDFSKKTVPDAGVDYS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + IV+ WT+ YA T ++H+E L+ +PE+++++ARGIEVGHIF FG+KYS PM A Sbjct: 241 DDALIAGIVDDWTSGYARTDEMHDEALWAEVPEDEQLNARGIEVGHIFNFGSKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKD V+MGSYGIG RVVAA++E+ HD GIIWPDSVAPF + LIN+++ D+V Sbjct: 301 KVTGPDGKDVPVEMGSYGIGPSRVVAALVEAGHDENGIIWPDSVAPFDVGLINLRSGDEV 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +YA+LS G DV +DD + G +FA+ADL+G P Q+IVG + + +VE+K Sbjct: 361 TDAACDDMYAQLSAAGLDVLYDDTDGRAGGKFALADLIGLPWQLIVGPRGLKTGEVELKA 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R +G R +S++ IN + ++R Sbjct: 421 RASGERHTVSIDAAINQLTAWHVDSR 446 >gi|316933915|ref|YP_004108897.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] gi|315601629|gb|ADU44164.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] Length = 439 Score = 555 bits (1429), Expect = e-156, Method: Compositional matrix adjust. Identities = 252/436 (57%), Positives = 334/436 (76%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYNKMFV+ Sbjct: 121 YIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLADTGE+ VF +D ++ P+P EN D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLADTGESGVFIDRDVLNLPVPDENVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH ++S +PE R++ RGIEVG IFYFGTKYS M Sbjct: 241 --ADLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R+V A+IE+ HD GIIWP++VAPF+++++N+K D Sbjct: 299 ANVAGPDGTDAPIHGGSYGVGVSRLVGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 AC+++Y LS G DV +DD ++ G++FA ADL+G P QV VG + +++ KVE+K Sbjct: 359 ATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQVHVGPRGLAEGKVELK 418 Query: 420 HRLTGIREDMSLEEVI 435 R G RE+++L +++ Sbjct: 419 RRSDGSRENLALADLV 434 >gi|188580267|ref|YP_001923712.1| prolyl-tRNA synthetase [Methylobacterium populi BJ001] gi|226701310|sp|B1ZA28|SYP_METPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|179343765|gb|ACB79177.1| prolyl-tRNA synthetase [Methylobacterium populi BJ001] Length = 441 Score = 555 bits (1429), Expect = e-156, Method: Compositional matrix adjust. Identities = 254/429 (59%), Positives = 332/429 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V +IR E Sbjct: 1 MRLSRYFLPILRETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLNKVCDVIRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA+E+ +PT+Q+ADLW ESGRY++YGKEMLRL DR+++ ++YGPT EEV+T+IFR+ Sbjct: 61 QDRAGAVEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHERELLYGPTAEEVVTEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY++LP YQI KFRDE+RPRFG MRSREFLMKD YSFDL ++HSYNK+FVS Sbjct: 121 SARSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDLDQAAARHSYNKVFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F LGL++IPMRA++GPIGGDLSHEFI+LA TGE++VFC + ++D P+P + DFD Sbjct: 181 YLRTFETLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDRAYLDMPVPPPSVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +V+ WT+ YAAT ++H+E +F +PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAGLQGVVDSWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG++ V MGSYGIG R+VAA IE+SHD GIIWPD++APF ++LIN+K D Sbjct: 301 VVTGPDGQERPVHMGSYGIGPSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +I + L G V +DD E+ G++FA ADL+G P QVIVG K +++ K+E+K Sbjct: 361 CDAACAEIQSALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKR 420 Query: 421 RLTGIREDM 429 R +G RE + Sbjct: 421 RASGERETL 429 >gi|121602198|ref|YP_989086.1| prolyl-tRNA synthetase [Bartonella bacilliformis KC583] gi|152112216|sp|A1USY3|SYP_BARBK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120614375|gb|ABM44976.1| prolyl-tRNA synthetase [Bartonella bacilliformis KC583] Length = 441 Score = 555 bits (1429), Expect = e-156, Method: Compositional matrix adjust. Identities = 258/439 (58%), Positives = 328/439 (74%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH LMLR G+I Q + GIYSWLPLG+K LD V IIREE Sbjct: 1 MRLSQYFLPILKENPKEAEIISHCLMLRAGIIRQQTSGIYSWLPLGKKVLDKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+S+PT+QSADLW ESGRYD YG EMLR+ DR ++ ++YGPT+EE++TDIFRS Sbjct: 61 QERAGALEISMPTIQSADLWRESGRYDDYGLEMLRIKDRQERDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP YQIQ KFRDE+RPRFGVMRSREFLMKD YSFDL E +K SYN+MF++ Sbjct: 121 YVRSYKDLPLNLYQIQWKFRDEIRPRFGVMRSREFLMKDGYSFDLDYESAKTSYNRMFIA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK IPMRA++GPIGG+LSHEFI+LA TGE+ VFC K F++ P + DF Sbjct: 181 YLRTFSRIGLKVIPMRADTGPIGGELSHEFIILAKTGESAVFCDKRFLEMTAPPVSVDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + L IV+QWTA YA T ++HN + + + ++ ++SARGIEVGHIFYFGTKYS PM A Sbjct: 241 DNVVLTDIVKQWTALYATTEEMHNAEEWAQICKSNQLSARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK++ V MGSYGIG R+VAA IE+SHD GIIWP + PF +IN K+ + Sbjct: 301 KVMGRDGKEYPVFMGSYGIGPSRLVAAAIEASHDENGIIWPKPITPFDFGIINTKSDNAK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y L G D DD E+ G++FA DL+G P Q+IVG K + +VEIK Sbjct: 361 CYGMCETLYQGLVNAGFDPLLDDRNERPGAKFATMDLIGLPTQIIVGPKSAAQDEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG +E +++E +N S Sbjct: 421 RKTGTKEVLTVEAALNRLS 439 >gi|91977335|ref|YP_569994.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] gi|123762679|sp|Q135Z6|SYP_RHOPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91683791|gb|ABE40093.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] Length = 439 Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust. Identities = 249/436 (57%), Positives = 332/436 (76%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ SYN+MFV+ Sbjct: 121 YVKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAAARKSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+C +D ++ P+P E+ D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYCDRDVLNLPVPGEDVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH+ ++S +PE R++ RGIEVG IFYFGTKYS M Sbjct: 241 G--DLTPIIQQWTSVYAATEDVHDAARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R+V A+IE+ HD GI WP+ VAPF+++++N+K D Sbjct: 299 ANVAGPDGADAPIHGGSYGVGVSRLVGAIIEACHDENGIKWPEEVAPFRVAILNLKQGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE++Y L+ G DV +DD ++ G++FA ADL+G P QV+VG K ++D KVE+K Sbjct: 359 QTDAACEQLYRELAAKGVDVLYDDTDQRAGAKFATADLIGIPWQVLVGPKGLADGKVELK 418 Query: 420 HRLTGIREDMSLEEVI 435 R G RE ++L E + Sbjct: 419 RRSDGSRETIALAEAV 434 >gi|86749715|ref|YP_486211.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] gi|114152241|sp|Q2IWW0|SYP_RHOP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|86572743|gb|ABD07300.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] Length = 439 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 248/436 (56%), Positives = 331/436 (75%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR++DR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRISDRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ SYN+MFV+ Sbjct: 121 YVKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAAARKSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+C +D + P+P E D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYCDRDVLSLPVPDETVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH+ ++S +PE R+ RGIEVG IFYFGTKYS M Sbjct: 241 G--DLTPIIKQWTSVYAATEDVHDAVRYESEVPEANRLHTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R+V A+IE+ HD GIIWP+ VAPF+++++N+K D Sbjct: 299 ANVAGPDGTDAPIHGGSYGVGVSRLVGAIIEACHDDNGIIWPEEVAPFRVAILNLKQGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE++Y L+ G DV +DD ++ G++FA ADL+G P QV+VG K ++D K+E+K Sbjct: 359 ATDAACEQLYKELAAKGVDVLYDDTDQRAGAKFATADLIGIPWQVLVGPKGLADGKIELK 418 Query: 420 HRLTGIREDMSLEEVI 435 R G RE+++L E + Sbjct: 419 RRSDGSRENIALAETV 434 >gi|39935993|ref|NP_948269.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] gi|81829575|sp|Q6N5P6|SYP_RHOPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|39649847|emb|CAE28369.1| proline-tRNA ligase [Rhodopseudomonas palustris CGA009] Length = 438 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 249/436 (57%), Positives = 334/436 (76%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYNKMFV+ Sbjct: 121 YIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+ +D ++ P+P EN D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH ++S +PE R++ RGIEVG IFYFGTKYS M Sbjct: 241 G--DLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R++ A+IE+ HD GIIWP++VAPF+++++N+K D Sbjct: 299 ANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 AC+++Y LS G DV +DD ++ G++FA ADL+G P Q+ VG + +++ KVE+K Sbjct: 359 ATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELK 418 Query: 420 HRLTGIREDMSLEEVI 435 R G RE+++L +V+ Sbjct: 419 RRSDGARENLALADVV 434 >gi|27379988|ref|NP_771517.1| prolyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] gi|81841648|sp|Q89KM8|SYP_BRAJA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|27353142|dbj|BAC50142.1| prolyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] Length = 439 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 251/436 (57%), Positives = 332/436 (76%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GMI Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGFRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R+GA+E+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QDRSGALELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+NLP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL ++ +YNKMFV+ Sbjct: 121 YVKSYKNLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDLNEAAARVAYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ VF ++D +D P+P E+ D++ Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVFINRDVLDLPVPGEDVDYE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH+ F+ +PE KR++ RGIEVG IFYFGTKYS PM Sbjct: 241 S--DLTPIIKQWTSVYAATEDVHDAARFEQEVPEAKRLNTRGIEVGQIFYFGTKYSEPMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R++ A+IE+ HD GI WP++VAPF+ ++N+K D Sbjct: 299 AMVAGPDGVDVPIHGGSYGVGVSRLLGAIIEACHDDAGIKWPEAVAPFRAVVLNLKQGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACEK+YA L G DV +DD ++ G++FA ADL+G P Q+++G K ++D KVE+K Sbjct: 359 AVDAACEKLYAELQAKGVDVLYDDTDQRAGAKFAAADLIGIPWQIMIGPKGLADGKVELK 418 Query: 420 HRLTGIREDMSLEEVI 435 R G RE MS + + Sbjct: 419 RRSDGSRETMSPADAV 434 >gi|118138193|pdb|2I4L|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase gi|118138194|pdb|2I4L|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase gi|118138195|pdb|2I4L|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase gi|118138196|pdb|2I4M|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Proams gi|118138197|pdb|2I4M|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Proams gi|118138198|pdb|2I4M|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Proams gi|118138199|pdb|2I4N|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Cysams gi|118138200|pdb|2I4N|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Cysams gi|118138201|pdb|2I4N|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Cysams gi|118138202|pdb|2I4O|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Atp gi|118138203|pdb|2I4O|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Atp gi|118138204|pdb|2I4O|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Atp Length = 458 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 249/436 (57%), Positives = 334/436 (76%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 21 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 80 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 81 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 140 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYNKMFV+ Sbjct: 141 YIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVA 200 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+ +D ++ P+P EN D+D Sbjct: 201 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYD 260 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH ++S +PE R++ RGIEVG IFYFGTKYS M Sbjct: 261 G--DLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMK 318 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R++ A+IE+ HD GIIWP++VAPF+++++N+K D Sbjct: 319 ANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDA 378 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 AC+++Y LS G DV +DD ++ G++FA ADL+G P Q+ VG + +++ KVE+K Sbjct: 379 ATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELK 438 Query: 420 HRLTGIREDMSLEEVI 435 R G RE+++L +V+ Sbjct: 439 RRSDGARENLALADVV 454 >gi|209885076|ref|YP_002288933.1| prolyl-tRNA synthetase [Oligotropha carboxidovorans OM5] gi|226701315|sp|B6JH58|SYP_OLICO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|209873272|gb|ACI93068.1| prolyl-tRNA synthetase [Oligotropha carboxidovorans OM5] Length = 441 Score = 551 bits (1420), Expect = e-155, Method: Compositional matrix adjust. Identities = 256/436 (58%), Positives = 330/436 (75%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++YFLPIL+E P++AEIASH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLTRYFLPILKETPKEAEIASHRLMLRAGMLRQEAAGIYAWLPLGFRVLKKIERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFRS Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYRNLP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL ++ SYNKMFV+ Sbjct: 121 YVKSYRNLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDLDEAAARLSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ VFC+KD +D P+P E+ D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVFCNKDVLDLPVPGEDVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT YAAT DVH+ +++ +P KRV+ RGIEVG IFYFGTKYS M Sbjct: 241 S--DLTPIIKQWTELYAATEDVHDAARYETEVPAEKRVNTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + V GSYG+G R+V A+IE+ HD GI WP++VAPF ++++N+K Sbjct: 299 ALVVGPDGVEKPVHSGSYGVGVSRLVGAIIEACHDENGIKWPEAVAPFTVAILNLKQGAS 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACEK+Y L+ G DV +DD ++ G +FA ADL+G P Q+++G K +++ KVEIK Sbjct: 359 DTDAACEKLYRALTANGVDVLYDDTDQRPGGKFATADLIGIPWQILIGPKGLAEGKVEIK 418 Query: 420 HRLTGIREDMSLEEVI 435 R G RE MS E+ + Sbjct: 419 CRADGSRELMSPEDAL 434 >gi|254502934|ref|ZP_05115085.1| prolyl-tRNA synthetase [Labrenzia alexandrii DFL-11] gi|222439005|gb|EEE45684.1| prolyl-tRNA synthetase [Labrenzia alexandrii DFL-11] Length = 442 Score = 551 bits (1420), Expect = e-155, Method: Compositional matrix adjust. Identities = 248/436 (56%), Positives = 332/436 (76%), Gaps = 2/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPILKETPKEAEIVSHRLMLRAGMIRQQSAGIYSWLPLGLKVLRKIERIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+++ +PT+Q ADLW ESGRYD+YGKEMLR+ DR+++ M++GPT+EE++TDIFRS Sbjct: 61 QARAGAVQLLMPTIQPADLWRESGRYDAYGKEMLRITDRHEREMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFG+MR REFLMKDAYSFDL E ++H+YN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGIMRGREFLMKDAYSFDLDQETARHAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPM+A++GPIGGDLSHEFI+LA+TGE++VF K ++ PIP+++TDF Sbjct: 181 YLRTFDRMGLKAIPMKADTGPIGGDLSHEFIILAETGESEVFLDKSLLEMPIPAKDTDF- 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L+ IVE WT PYAAT ++H+E F +L E+ RVSARGIEVGHIFYFGTKYS M A Sbjct: 240 -WSDLSPIVESWTTPYAATDEMHDEAAFGALEEDTRVSARGIEVGHIFYFGTKYSDAMGA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 A+G + V MGSYG+G R++ A+IE++HD GIIWP SVAPF + +IN++ D + Sbjct: 299 KVATAEGTEVPVHMGSYGVGVSRLLGALIEANHDEDGIIWPKSVAPFHVGIINMRPGDDL 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CE +YA+L G +V +DD + G++FA DL+G P QV+ G + + D +E+K Sbjct: 359 TDPVCEDLYAKLEAAGIEVLYDDTDSRAGAKFATMDLIGLPFQVVAGPRGLKDGVLEVKD 418 Query: 421 RLTGIREDMSLEEVIN 436 R TG +E ++ E +N Sbjct: 419 RATGEKEMLTPEATLN 434 >gi|192291648|ref|YP_001992253.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] gi|226701325|sp|B3Q7L2|SYP_RHOPT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|192285397|gb|ACF01778.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] Length = 438 Score = 551 bits (1420), Expect = e-155, Method: Compositional matrix adjust. Identities = 249/436 (57%), Positives = 334/436 (76%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYNKMFV+ Sbjct: 121 YIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+ +D ++ P+P EN D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH ++S +PE R++ RGIEVG IFYFGTKYS M Sbjct: 241 G--DLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R++ A+IE+ HD GIIWP++VAPF+++++N+K D Sbjct: 299 ANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 AC+++Y LS G DV +DD ++ G++FA ADL+G P Q+ VG + +++ KVE+K Sbjct: 359 ATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELK 418 Query: 420 HRLTGIREDMSLEEVI 435 R G RE+++L +V+ Sbjct: 419 RRSDGSRENLALADVV 434 >gi|16126174|ref|NP_420738.1| prolyl-tRNA synthetase [Caulobacter crescentus CB15] gi|221234945|ref|YP_002517381.1| prolyl-tRNA synthetase [Caulobacter crescentus NA1000] gi|81856261|sp|Q9A6Z5|SYP_CAUCR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782893|sp|B8GWT1|SYP_CAUCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|13423386|gb|AAK23906.1| prolyl-tRNA synthetase [Caulobacter crescentus CB15] gi|220964117|gb|ACL95473.1| prolyl-tRNA synthetase [Caulobacter crescentus NA1000] Length = 443 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 254/436 (58%), Positives = 329/436 (75%), Gaps = 1/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L+ + I+REE Sbjct: 1 MRSSRYFLPVLKEAPSDAQIVSHQLMLRAGMIRQEAAGIYAWLPLGLRVLNKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +PT+Q ADLW ESGRYD YG EMLR+ DR+ + +++GPT EEV+TDIFR+ Sbjct: 61 MDRAGAIELLMPTIQLADLWRESGRYDDYGDEMLRITDRHKRELLFGPTAEEVVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL +G++ SYN+MFV+ Sbjct: 121 SIKSYKDLPKNLYNIQWKFRDERRPRFGVMRGREFLMKDAYSFDLDADGARKSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL +F R+GLK++PMRA++GPIGGDLSHEFIVLA+TGE+ VFC KD ++ P P + D+ Sbjct: 181 YLNLFARMGLKAVPMRADTGPIGGDLSHEFIVLAETGESAVFCHKDLVEMPAPGPDLDWI 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +V Q TA YAAT ++H+E F++LPE R+SARGIEVGHIF FGTKYS PM A Sbjct: 241 N-GDLQPLVNQRTALYAATEEMHDEAAFNALPEGDRLSARGIEVGHIFSFGTKYSEPMKA 299 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DG+ VQMGSYG+G R++ A+IE+SHD GIIWP+SVAPF + ++N++ D Sbjct: 300 TVQGPDGQQVPVQMGSYGVGVSRLLGAIIEASHDEGGIIWPESVAPFDVGIVNMRQGDAA 359 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE Y L G +V +DD + G++FA DL+G P Q+IVG K +++ VEIKH Sbjct: 360 CDAACETAYNALKAAGREVLYDDTDARGGAKFATMDLIGLPWQLIVGPKGIAEGVVEIKH 419 Query: 421 RLTGIREDMSLEEVIN 436 R TG R SLE V++ Sbjct: 420 RKTGERHTASLESVLD 435 >gi|85717006|ref|ZP_01047968.1| prolyl-tRNA synthetase [Nitrobacter sp. Nb-311A] gi|85696130|gb|EAQ34026.1| prolyl-tRNA synthetase [Nitrobacter sp. Nb-311A] Length = 439 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 253/436 (58%), Positives = 329/436 (75%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L + AI+REE Sbjct: 1 MRLSRFFLPILKETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+ + ++YGPT+EE++T+IFR Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIQDRHKRELLYGPTNEEMITEIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYNKMFV+ Sbjct: 121 YIRSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEAGARRSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+ KD +D P+P + D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDKDVLDLPVPGTDVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L IV+QWT YAAT DVH+ ++ +PE +RV RGIEVG IFYFGTKYS M Sbjct: 241 G--DLTPIVKQWTVAYAATEDVHDGPRYEREVPEERRVHTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 G DG + + GSYG+G R+V A+IE+ HD GI WPD+VAPF+++++N+K Sbjct: 299 TLVTGPDGVEQPIHGGSYGVGVSRLVGAIIEACHDEGGIKWPDAVAPFRVAILNLKQGAG 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE+IY LS G DV +DD ++ G++FA ADL+G P QV+VG K +++ KVEIK Sbjct: 359 DTDAACERIYRELSAKGIDVLYDDTDQRAGAKFATADLIGIPWQVMVGPKGLAEGKVEIK 418 Query: 420 HRLTGIREDMSLEEVI 435 R G RE+++LE+V+ Sbjct: 419 RREDGSRENVALEDVV 434 >gi|114799658|ref|YP_760468.1| prolyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] gi|123323241|sp|Q0C1C5|SYP_HYPNA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114739832|gb|ABI77957.1| prolyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] Length = 439 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 249/435 (57%), Positives = 329/435 (75%), Gaps = 2/435 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK+FLP+ +E P DA I SH+LMLRTGMI Q+ GIYSWLPLG + L + I+REE Sbjct: 1 MRLSKFFLPVSKEAPADAAIVSHQLMLRTGMIRQNGAGIYSWLPLGYRVLKRIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIEM +PTLQ ADLW ESGRYD YGKEMLR+ DR+++ M+YGPT+EE++TD+FR+ Sbjct: 61 MNRAGAIEMLMPTLQQADLWRESGRYDDYGKEMLRIKDRHERDMLYGPTNEELITDVFRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP Y Q KFRDE+RPRFGVMR REFLMKDAYSFDLT E ++ +Y KMF + Sbjct: 121 YVKSYKQLPLNLYHQQWKFRDEVRPRFGVMRGREFLMKDAYSFDLTEEDARAAYRKMFCA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F R+GL +IPMRA++GPIGGDLSHEFI+LADTGE+ VFC K +D P P + DF+ Sbjct: 181 YLNAFDRMGLTAIPMRADTGPIGGDLSHEFIILADTGESAVFCDKALLDLPAPGLDLDFE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L V + T YAAT ++H+E F++LPE++RVSARGIEVGHIF+FGTKYS PM+A Sbjct: 241 S--DLTPFVTERTGYYAATEEMHDEAAFNALPEDRRVSARGIEVGHIFFFGTKYSKPMNA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DG+ VQMGSYGIG R++ A+IE+ HD GI+WP+SVAPF + LIN++ ++ Sbjct: 299 VVQGPDGQMVPVQMGSYGIGVSRLLGAIIEACHDENGIVWPESVAPFDVGLINMRPGNEA 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +YA L+ G +V +D+ ++ G++FA DL+G P Q VG + V++ KVE+K+ Sbjct: 359 CDAACNTLYAALTAAGREVLYDETDDRAGAKFARMDLIGLPWQTTVGPRGVTEGKVEVKN 418 Query: 421 RLTGIREDMSLEEVI 435 R TG + D+ +E+++ Sbjct: 419 RKTGEKHDVKIEDML 433 >gi|75676056|ref|YP_318477.1| prolyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] gi|114152223|sp|Q3SRG6|SYP_NITWN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|74420926|gb|ABA05125.1| Prolyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] Length = 439 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 252/436 (57%), Positives = 327/436 (75%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L + AI+REE Sbjct: 1 MRLSRFFLPILKETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+ + ++YGPT+EE++T+IFR Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIQDRHKRELLYGPTNEEMITEIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYN+MFV+ Sbjct: 121 YIRSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEAGARRSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+ KD +D PIP D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDKDVLDLPIPGTEVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L IV QWT YAAT DVH+ ++ +PE +RV RGIEVG IFYFGTKYS M Sbjct: 241 G--DLTPIVRQWTTAYAATEDVHDGPRYEREVPEERRVHTRGIEVGQIFYFGTKYSESMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + + GSYG+G R+V A+IE+ HD GI WP++VAPF ++++N+K Sbjct: 299 ALVTGTDGVEQPIHGGSYGVGVSRLVGAIIEACHDEAGIKWPEAVAPFTVAILNLKQGAS 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +ACE+IY LS G DV +DD ++ G++FA ADL+G P QV+VG K +++ KVEIK Sbjct: 359 DTDEACERIYRELSARGVDVLYDDTDQRAGAKFATADLIGSPWQVMVGPKGLAEGKVEIK 418 Query: 420 HRLTGIREDMSLEEVI 435 R G RE+++LE+ + Sbjct: 419 RRGDGSRENVALEDAV 434 >gi|83592911|ref|YP_426663.1| prolyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] gi|114152243|sp|Q2RU19|SYP_RHORT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|83575825|gb|ABC22376.1| Prolyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] Length = 435 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 258/435 (59%), Positives = 319/435 (73%), Gaps = 5/435 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ LP L+E P +AEI SH+LMLR GMI QH+ GIY+WLPLG + L + ++REE Sbjct: 1 MRLSRFLLPTLKETPSEAEIVSHRLMLRAGMIRQHASGIYNWLPLGLRVLRKIEQVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ TGA E+ +PT+QSADLW ESGRYD YGKEMLR+ DR+++ M+YGPTHEEV TD+FR Sbjct: 61 QDATGAQEILMPTIQSADLWRESGRYDDYGKEMLRIVDRHERDMLYGPTHEEVATDVFRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYR LP YQIQ KFRDE+RPRFGVMR REFLMKD YSFDLT EG++HSYNKMFV+ Sbjct: 121 NVKSYRALPQNLYQIQWKFRDEVRPRFGVMRGREFLMKDNYSFDLTYEGARHSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGLK+IPM A++GPIGG LSHEFI+LADTGE+ VFC +D +D P P EN D+D Sbjct: 181 YLRTFARLGLKAIPMAADTGPIGGKLSHEFIILADTGESAVFCHRDLLDKPAP-ENVDYD 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L +V+ WT+ YAAT ++H +PE VSARGIEVGHIF+FGTKYS PM A Sbjct: 240 S--DLQPLVDSWTSLYAATDEMHRPD--HGVPEGDLVSARGIEVGHIFHFGTKYSAPMGA 295 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T DG V MGSYGIG R+VA +IE+SHD GIIWPD VAPF I +IN+K D Sbjct: 296 TVTAPDGSSQAVFMGSYGIGVSRLVAGIIEASHDDNGIIWPDGVAPFDIGVINLKVGDAA 355 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C +Y RL G DV +DD ++ G++FA DL+G P QVI G K V+ VE+K Sbjct: 356 TDGVCADLYGRLRAAGKDVLFDDTDDRAGAKFATMDLIGLPWQVIAGPKGVAKGMVELKE 415 Query: 421 RLTGIREDMSLEEVI 435 R TG R ++S++ + Sbjct: 416 RATGERHELSIDSAL 430 >gi|295689605|ref|YP_003593298.1| prolyl-tRNA synthetase [Caulobacter segnis ATCC 21756] gi|295431508|gb|ADG10680.1| prolyl-tRNA synthetase [Caulobacter segnis ATCC 21756] Length = 443 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 253/436 (58%), Positives = 328/436 (75%), Gaps = 1/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L+ + I+REE Sbjct: 1 MRLSRYFLPVLKEAPSDAQIVSHQLMLRAGMIRQEAAGIYAWLPLGLRVLNKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +PT+Q ADLW ESGRYD YG EMLR+ DR+ + +++GPT EEV+TDIFR+ Sbjct: 61 MDRAGAIELLMPTIQLADLWRESGRYDDYGDEMLRITDRHKRELLFGPTAEEVVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY++LP Y IQ KFRDE RPRFGVMR REF MKDAYSFDL +G++ SYN+MFV+ Sbjct: 121 SIKSYKDLPKNLYNIQWKFRDERRPRFGVMRGREFFMKDAYSFDLDADGARKSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL +F R+GLK++PMRA++GPIGGDLSHEFIVLA+TGE+ VFC KD ++ P P + D+ Sbjct: 181 YLNLFARMGLKAVPMRADTGPIGGDLSHEFIVLAETGESAVFCHKDLVEMPAPGPDLDWI 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV Q TA YAAT ++H+E F++LPE R+SARGIEVGHIF FGTKYS PM A Sbjct: 241 N-GDLQPIVNQRTALYAATEEMHDEAAFNALPEGDRLSARGIEVGHIFSFGTKYSEPMKA 299 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DG+ VQMGSYG+G R++ A+IE+SHD GIIWP+SVAPF + ++N++ D Sbjct: 300 TVQGPDGQQVPVQMGSYGVGVSRLLGAIIEASHDEGGIIWPESVAPFDVGIVNMRQGDAA 359 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE Y L G DV +DD + G++FA DL+G P Q+IVG K +++ VEIK+ Sbjct: 360 CDAACETAYNALKAAGRDVLYDDTDARGGAKFATMDLIGLPWQLIVGPKGIAEGVVEIKN 419 Query: 421 RLTGIREDMSLEEVIN 436 R TG R SL+ V++ Sbjct: 420 RKTGERHTASLDSVLD 435 >gi|329850610|ref|ZP_08265455.1| prolyl-tRNA synthetase [Asticcacaulis biprosthecum C19] gi|328840925|gb|EGF90496.1| prolyl-tRNA synthetase [Asticcacaulis biprosthecum C19] Length = 443 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 247/436 (56%), Positives = 332/436 (76%), Gaps = 4/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLP+L+ENP +A+I SH+LMLRTGMI Q + GIY+WLPLG K L V I+ EE Sbjct: 1 MRLSRFFLPLLKENPAEAQIVSHRLMLRTGMIRQQAAGIYAWLPLGLKVLRKVERIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G+I++ +PTLQ ADLW ESGRY+ YG+EMLR+ DR+D+ ++YGPT EE +T++FR+ Sbjct: 61 MARAGSIQLLMPTLQLADLWRESGRYEDYGQEMLRIKDRHDRDLLYGPTAEEAVTEVFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQI KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MF++ Sbjct: 121 SVKSYKDLPLNLYQISWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEASARKAYNRMFIA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F R+GLK++PMRA++GPIGGDLSHEFI+LADTGE+ VFC KD +D P P + D++ Sbjct: 181 YLNTFSRMGLKAVPMRADTGPIGGDLSHEFIILADTGESAVFCHKDLVDMPAPGHDVDWN 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L +V+Q TA YAAT ++H+E F +PE+K++SARGIEVGHIFYFG KYS PM A Sbjct: 241 D---LQGLVDQRTALYAATEEMHDEAAFGEVPEDKKLSARGIEVGHIFYFGEKYSKPMKA 297 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG + V MGSYG+G R++ A+IE+SHD GIIWP+SVAPF +++IN++ D+ Sbjct: 298 TVNGPDG-EVTVHMGSYGVGVSRLLGAIIEASHDEAGIIWPESVAPFDVAVINLRPGDEA 356 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACEK YA L+ G DV ++D E+ G++FA DL+G P Q+I+G K +++ KVE+K Sbjct: 357 CDAACEKAYAALTAAGRDVLYNDTDERPGAKFASMDLIGIPWQLIIGPKGLAEGKVELKQ 416 Query: 421 RLTGIREDMSLEEVIN 436 R TG R+ ++V+N Sbjct: 417 RATGERQTALFDDVLN 432 >gi|148255883|ref|YP_001240468.1| prolyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] gi|166980102|sp|A5EK68|SYP_BRASB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146408056|gb|ABQ36562.1| Prolyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] Length = 444 Score = 545 bits (1403), Expect = e-153, Method: Compositional matrix adjust. Identities = 250/436 (57%), Positives = 326/436 (74%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG K L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGFKVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PTLQ ADLW ESGRYD+YG EMLR++DR+ + ++YGPT+EE++TDIFR+ Sbjct: 61 QNRAGALELLMPTLQLADLWRESGRYDAYGPEMLRISDRHKRELLYGPTNEEMITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYRNLP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL G++ +YNKMFV+ Sbjct: 121 YVKSYRNLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDLDEAGARRAYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+C +D +D PIP + D+D Sbjct: 181 YLRTFARMGLKGIPMRAETGPIGGDLSHEFIVLAETGESGVYCDRDVLDLPIPPASVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH+ F++ +PE +R+ RGIEVG IFYFGTKYS PM Sbjct: 241 G--DLTPIIKQWTSLYAATEDVHDGARFEAEVPEERRLHTRGIEVGQIFYFGTKYSEPMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + + GSYG+G R+ A+IE+ HD GI WP+ VAPF+ ++N+K Sbjct: 299 ALVAGPDGAEVTIHGGSYGVGVSRLAGAIIEACHDDAGIKWPEEVAPFRAVILNLKQGGS 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE++Y L G DV +DD ++ G +FA ADL+G P Q++VG K +++ KVE+K Sbjct: 359 DTDAACEQLYRDLLAKGVDVLYDDTEQRAGGKFATADLIGIPWQIMVGPKSLAEGKVEVK 418 Query: 420 HRLTGIREDMSLEEVI 435 R G R+ MS +V+ Sbjct: 419 TRSDGARQMMSPADVV 434 >gi|315499825|ref|YP_004088628.1| prolyl-tRNA synthetase [Asticcacaulis excentricus CB 48] gi|315417837|gb|ADU14477.1| prolyl-tRNA synthetase [Asticcacaulis excentricus CB 48] Length = 439 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 243/436 (55%), Positives = 326/436 (74%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y LP+L+ENP +A+I SH+LMLRTGMI Q + GIY+WLPLG + L + I+ EE Sbjct: 1 MRLSRYLLPLLKENPSEAQIVSHRLMLRTGMIRQEAAGIYAWLPLGLRVLRKIEKIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +PTLQ ADLW ESGRYD YG+EMLR+ DR+++ M+YGPT+EE++T+IFR Sbjct: 61 MQRAGAVELLMPTLQLADLWRESGRYDDYGQEMLRIKDRHEREMLYGPTNEEMITEIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MF++ Sbjct: 121 TVKSYKDLPMNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEASARKAYNRMFIA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F RLGLK++PMRA++GPIGGDLSHEFI+LA+TGE+ VFC KD +D P P + D+D Sbjct: 181 YLNTFSRLGLKAVPMRADTGPIGGDLSHEFIILAETGESAVFCHKDLVDMPAPGADVDWD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L +V+Q T+ YAAT ++H+E F+++P +K++SARGIEVGHIFYFG KYS PM A Sbjct: 241 D---LQGLVDQRTSLYAATEEMHDEAAFNAVPADKQLSARGIEVGHIFYFGEKYSAPMGA 297 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GADG V MGSYG+G R++ +IE+SHD GIIWP+SV PF ++L+N++ D+ Sbjct: 298 KVSGADGSQVNVHMGSYGVGVSRLIGGIIEASHDEAGIIWPESVTPFDVALVNLRVGDEA 357 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACEK Y L G DV + D ++ G++FA DL+G P Q+I+G K +++ +VEIKH Sbjct: 358 CDAACEKAYKALKAAGRDVLYHDTDDRPGAKFASMDLIGIPWQLIIGPKGIAEGQVEIKH 417 Query: 421 RLTGIREDMSLEEVIN 436 R TG R + + V+ Sbjct: 418 RATGERHTAAFDAVLE 433 >gi|92117720|ref|YP_577449.1| prolyl-tRNA synthetase [Nitrobacter hamburgensis X14] gi|123083656|sp|Q1QLA8|SYP_NITHX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91800614|gb|ABE62989.1| prolyl-tRNA synthetase [Nitrobacter hamburgensis X14] Length = 439 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 249/437 (56%), Positives = 329/437 (75%), Gaps = 3/437 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+E P++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + AI+REE Sbjct: 1 MRLSRFFLPILKETPKEAEIVSHRLMLRAGMMRQEAAGIYAWLPLGLRVLKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+ + ++YGPT+EE++T+IFRS Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIQDRHKRELLYGPTNEEMITEIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYN+MFV+ Sbjct: 121 YVRSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEVGARLSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+ KD +D P+P + D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDKDVLDLPVPGTDVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L IV+QWT YAAT DVH+ ++ +PE +RV RGIEVG IFYFGTKYS M Sbjct: 241 G--DLTPIVKQWTTAYAATEDVHDGARYEREVPEERRVHTRGIEVGQIFYFGTKYSESMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + + GSYG+G R+V A+IE+ HD GI WP++VAPF ++++N+K Sbjct: 299 ALVAGPDGVEQPIHGGSYGVGVSRLVGAIIEACHDDAGIKWPEAVAPFTVAILNLKQGAG 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE++Y LS G DV +DD ++ G++FA ADL+G P QV+VG K +++ KVEIK Sbjct: 359 DTDAACERLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQVMVGPKGLAEGKVEIK 418 Query: 420 HRLTGIREDMSLEEVIN 436 R G RE+++LE+ + Sbjct: 419 RRGDGTRENVALEDAVE 435 >gi|307942137|ref|ZP_07657488.1| prolyl-tRNA synthetase [Roseibium sp. TrichSKD4] gi|307774423|gb|EFO33633.1| prolyl-tRNA synthetase [Roseibium sp. TrichSKD4] Length = 443 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 247/437 (56%), Positives = 329/437 (75%), Gaps = 3/437 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYFLPIL+E P++AEI SH+LMLR GMI Q S GIYSWLP+G + L + I+ EE Sbjct: 1 MRLSKYFLPILKETPKEAEIVSHRLMLRAGMIRQQSAGIYSWLPMGHRVLRKIERIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+++ +PT+QSA+LW ESGRYD+YGKEMLR+ DR+++ +++GPT+EE++TDIFR Sbjct: 61 QNRAGAVQLLMPTIQSAELWRESGRYDAYGKEMLRITDRHERDILFGPTNEEMITDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E + SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDKESAVESYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL +IPM+AE+GPIGGDLSHEFIVLADTGE++V+C D++ P E+ +FD Sbjct: 181 YLRTYKRMGLTAIPMKAETGPIGGDLSHEFIVLADTGESEVYCHADYLTKQTPGEDVNFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 LN IV WT+ YAAT DV ++ F++ +PE+KR+ ARGIEVG FYFGTKYS PM Sbjct: 241 G--DLNPIVNDWTSHYAATEDVVDKAAFEAKVPEDKRIVARGIEVGQTFYFGTKYSEPMG 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G+DGK+ V MGSYG+G R++ A+IE+SHD GIIW SVAPF + LIN+K D+ Sbjct: 299 AKVAGSDGKEVPVHMGSYGVGVSRLLGALIEASHDDAGIIWHKSVAPFHVGLINLKPGDE 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE +YA+ G +V +DD + G++FA DL+G P QV+ G + + D +E+K Sbjct: 359 TTDAACEDLYAKFEAAGVEVLYDDTDNRAGAKFASMDLIGLPYQVVAGPRGLKDGVLEVK 418 Query: 420 HRLTGIREDMSLEEVIN 436 +R TG +E ++ E +N Sbjct: 419 NRATGEKEMLTPEATLN 435 >gi|299135009|ref|ZP_07028200.1| prolyl-tRNA synthetase [Afipia sp. 1NLS2] gi|298589986|gb|EFI50190.1| prolyl-tRNA synthetase [Afipia sp. 1NLS2] Length = 445 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 249/435 (57%), Positives = 328/435 (75%), Gaps = 3/435 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++FLPIL+E P++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLTRFFLPILKETPKEAEIVSHRLMLRAGMMRQEAAGIYAWLPLGFRVLKKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QDRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIQDRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYR+LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ SYNKMFV+ Sbjct: 121 YVKSYRSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEAAARLSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ VFC+KD +D P+P + ++D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVFCNKDVLDLPVPGADVNYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT YAAT DVH+ ++ +P +KRV+ RGIEVG IFYFGTKYS M Sbjct: 241 G--DLTPIIKQWTELYAATEDVHDTARYEKEVPADKRVNTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G+DG + + GSYGIG R+V A+IE+ HD GI WP+ VAPF+++++N+K Sbjct: 299 ALVVGSDGAEKPIHGGSYGIGVSRLVGAIIEACHDENGIQWPEEVAPFRVAILNLKQGAA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACEK+Y LS G DV +DD ++ G +FA ADL+G P Q++VG K +++ KVEIK Sbjct: 359 DTDTACEKLYKELSAAGVDVLYDDTDQRPGGKFATADLIGIPWQILVGPKGLAEGKVEIK 418 Query: 420 HRLTGIREDMSLEEV 434 R G RE MS++E Sbjct: 419 KRADGSREMMSVDEA 433 >gi|167646774|ref|YP_001684437.1| prolyl-tRNA synthetase [Caulobacter sp. K31] gi|189083491|sp|B0SZ28|SYP_CAUSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167349204|gb|ABZ71939.1| prolyl-tRNA synthetase [Caulobacter sp. K31] Length = 445 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 254/435 (58%), Positives = 323/435 (74%), Gaps = 2/435 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L V I+REE Sbjct: 1 MRLSRYFLPVLKEAPSDAQIVSHQLMLRAGMIRQEAAGIYAWLPLGLRVLKKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +PT+Q ADLW ESGRYD YG EMLR+ DR+ + ++YGPT EEV+TDIFR+ Sbjct: 61 MDRAGAIELLMPTIQLADLWRESGRYDDYGDEMLRITDRHKRDLLYGPTAEEVVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL EG++ +YN+MFV+ Sbjct: 121 SVKSYKDLPKNLYNIQWKFRDERRPRFGVMRGREFLMKDAYSFDLDAEGARKAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL +F R+GLK++PMRA++GPIGGDLSHEFIVLA+TGE+ VFC KD ++ P + D+ Sbjct: 181 YLNLFSRMGLKAVPMRADTGPIGGDLSHEFIVLAETGESAVFCHKDLVEMAAPGPDIDW- 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L +V + TA YAAT ++H+E F +LPE R+SARGIEVGHIF FGTKYS PM A Sbjct: 240 -YGDLQPLVNERTALYAATEEMHDEAAFAALPEGDRLSARGIEVGHIFSFGTKYSEPMKA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKD VQMGSYG+G R++ A+IE+SHD GIIWP+SVAPF + +IN++ D Sbjct: 299 LVTGPDGKDVPVQMGSYGVGVSRLLGAIIEASHDEGGIIWPESVAPFDVGVINMRQGDAA 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C +ACE Y L G DV +DD + G++FA DL+G P Q+IVG K +++ VE+K+ Sbjct: 359 CDEACETAYKALQAAGRDVLYDDNDTRGGAKFATMDLIGVPWQLIVGPKGIAEGVVELKN 418 Query: 421 RLTGIREDMSLEEVI 435 R TG R L EVI Sbjct: 419 RKTGERHSAPLAEVI 433 >gi|146341083|ref|YP_001206131.1| prolyl-tRNA synthetase [Bradyrhizobium sp. ORS278] gi|166980103|sp|A4YVI0|SYP_BRASO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146193889|emb|CAL77906.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [Bradyrhizobium sp. ORS278] Length = 444 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 248/436 (56%), Positives = 326/436 (74%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG K L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGFKVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PTLQ ADLW ESGRYD+YG EMLR++DR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGALELLMPTLQLADLWRESGRYDAYGPEMLRISDRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYRNLP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL G++ +YNKMFV+ Sbjct: 121 YVKSYRNLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDLDEAGARRAYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+C ++ +D PIPS + D+D Sbjct: 181 YLRTFARMGLKGIPMRAETGPIGGDLSHEFIVLAETGESGVYCDRNVLDLPIPSASVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I+++WT+ YAAT DVH+ F++ +P +RV RGIEVG IFYFGTKYS PM Sbjct: 241 G--DLTPIIKEWTSLYAATEDVHDGARFEAEVPAERRVHTRGIEVGQIFYFGTKYSEPMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + + GSYG+G R+ A+IE+ HD GI WP+ VAPF+ ++N+K Sbjct: 299 ALVAGPDGAEVTIHGGSYGVGVSRLAGAIIEACHDDAGIKWPEEVAPFRAVILNLKQGGS 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE++Y L G DV +DD ++ G +FA ADL+G P Q++VG K +++ KVE+K Sbjct: 359 DTDAACEQLYRDLLAKGVDVLYDDTEQRAGGKFATADLIGIPWQIMVGPKSLAEGKVEVK 418 Query: 420 HRLTGIREDMSLEEVI 435 R G RE MS +++ Sbjct: 419 TRSDGAREMMSPADIV 434 >gi|254418115|ref|ZP_05031839.1| prolyl-tRNA synthetase [Brevundimonas sp. BAL3] gi|196184292|gb|EDX79268.1| prolyl-tRNA synthetase [Brevundimonas sp. BAL3] Length = 438 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 249/437 (56%), Positives = 327/437 (74%), Gaps = 4/437 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLP L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPTLKEAPSDAQIVSHQLMLRAGMIKQEAAGIYAWLPLGLRVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+++ ++YGPT+EE++TDIFR+ Sbjct: 61 QQRAGAVELLMPTLQLADLWRESGRYDAYGPEMLRITDRHERELLYGPTNEEMITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP + IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MFV+ Sbjct: 121 YVKSYKSLPLNLFHIQWKFRDERRPRFGVMRGREFLMKDAYSFDVDEASARKAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F R+GLK++PMRA++GPIGGDLSHEFIVLA+TGE+ VFC K ++ P P + D+D Sbjct: 181 YLNTFARMGLKAVPMRADTGPIGGDLSHEFIVLAETGESAVFCDKALVEMPAPGADVDWD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D L SIV+Q TA YAAT ++H+E F++ E R+SARGIEVGHIFYFG KYS PM Sbjct: 241 D---LQSIVDQRTALYAATEEMHDEARFEAETAEGDRLSARGIEVGHIFYFGEKYSAPMK 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG+D V MGSYG+G R++ A+IE+SHD GIIWPD+VAPF + +IN++A+D Sbjct: 298 AKVAGPDGQDAEVHMGSYGVGVSRLLGAIIEASHDEGGIIWPDAVAPFDVVVINLRANDA 357 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE A+L K+G DV +DD E+ G +FA ADL+G P Q+ +G K ++D VE+K Sbjct: 358 AVSAACEDAVAQLEKLGKDVLYDDTDERPGGKFATADLIGVPWQLTIGPKGLADGVVELK 417 Query: 420 HRLTGIREDMSLEEVIN 436 R TG + + L E I Sbjct: 418 RRATGEKVSVPLAEAIE 434 >gi|115524551|ref|YP_781462.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] gi|122296196|sp|Q07NK2|SYP_RHOP5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|115518498|gb|ABJ06482.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] Length = 439 Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust. Identities = 241/436 (55%), Positives = 326/436 (74%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRYFLPILKETPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MFV+ Sbjct: 121 YVKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEAAARRAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+C + ++ P+P E+ D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESAVYCDSEVLNLPVPGEDVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH + FD +P +++ RGIEVG IFYFGTKYS M Sbjct: 241 G--DLTPIIKQWTSVYAATEDVHEAERFDREVPAERKLHTRGIEVGQIFYFGTKYSEAMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + + GSYG+G R++ A+IE+ HD GI WP++VAPF+ +++N+K Sbjct: 299 ALVAGPDGVEVPIHGGSYGVGVSRLLGAIIEACHDENGIKWPEAVAPFRAAILNLKQGAA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE++Y L G DV +DD ++ G++FA ADL+G P Q++VG K ++D VE+K Sbjct: 359 ETDAACEQLYRELIAKGVDVLYDDTDQRAGAKFATADLIGIPWQILVGPKGLADGTVELK 418 Query: 420 HRLTGIREDMSLEEVI 435 R G RE+++L E + Sbjct: 419 RRADGSRENVALAEAV 434 >gi|217976887|ref|YP_002361034.1| prolyl-tRNA synthetase [Methylocella silvestris BL2] gi|254782909|sp|B8EP84|SYP_METSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|217502263|gb|ACK49672.1| prolyl-tRNA synthetase [Methylocella silvestris BL2] Length = 440 Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust. Identities = 249/437 (56%), Positives = 324/437 (74%), Gaps = 3/437 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR GMI Q + GIYSWLPLG + L V I+R+E Sbjct: 1 MRLSRYFLPILRENPKEAEIVSHRLMLRAGMIRQEAAGIYSWLPLGLRVLQKVAEIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +PTLQ ADLW E+GRY++YG EMLR+ DR+++ M+YGPT+E+++T IFRS Sbjct: 61 MNRAGAIELLMPTLQLADLWRETGRYEAYGPEMLRIKDRHEREMLYGPTNEDMITAIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SYR LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MFVS Sbjct: 121 YVRSYRELPKILYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAAARLAYNRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLRIF R+GL+ IPMRAE+GPIGGD SHEFI+LA+TGE+ V+C ++ PIP E D+D Sbjct: 181 YLRIFARMGLRVIPMRAETGPIGGDQSHEFIILAETGESAVYCDAGVLNLPIPDETIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L+ IV+QWT+ YAAT DVH+ + F E +R+ RGIEVG +F+FG KYS PM+ Sbjct: 241 G--DLSPIVKQWTSLYAATEDVHDAERFALETTEGQRIETRGIEVGQVFFFGDKYSKPMN 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + Q GSYG+G R+V A+IE++HD GIIWP SVAPFK+ + N+K D Sbjct: 299 ANIAGPDGVERPFQGGSYGVGVSRLVGALIEANHDEAGIIWPASVAPFKVGIANLKVGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACEK+ A L K G DV +DD ++ G++FA DL+G P Q IVG K +++ K+EIK Sbjct: 359 ATDAACEKLLAALEKAGVDVLYDDSADRPGAKFAKLDLIGLPYQAIVGPKGLAEGKIEIK 418 Query: 420 HRLTGIREDMSLEEVIN 436 R +G R ++SL+E I Sbjct: 419 TRASGERVELSLDEAIE 435 >gi|154253644|ref|YP_001414468.1| prolyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] gi|171769681|sp|A7HY28|SYP_PARL1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|154157594|gb|ABS64811.1| prolyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] Length = 439 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 245/436 (56%), Positives = 329/436 (75%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP L+ENP +A+IASH+LMLR GM+ Q + GIY+WLPLG L + I+R+E Sbjct: 1 MRLSRYFLPTLKENPAEAQIASHRLMLRAGMVRQTAAGIYAWLPLGLAVLRKIEGIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GAIE+ +PTLQSADLW +SGRYD+YG EMLR+ DR+++ M+YGPT+EE++TDIFR Sbjct: 61 QKRAGAIELLMPTLQSADLWRQSGRYDAYGPEMLRIVDRHERDMLYGPTNEEMITDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR+LP + IQ KFRDE+RPRFGVMR REFLMKD YSFDL EG++ +Y KMFVS Sbjct: 121 AVRSYRDLPRNLFHIQWKFRDEIRPRFGVMRGREFLMKDGYSFDLDVEGARRAYRKMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPM A++GPIGGD+SHEFI+LA+TGE+ VFC +D +D +P ++ D++ Sbjct: 181 YLRSFARMGLKAIPMAADTGPIGGDMSHEFIILAETGESAVFCHRDLVDMAVPGDDIDYE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 LN ++ T YAAT + H+ FD+ +P++K++SARGIEVGHIF+FGTKYS M Sbjct: 241 --TDLNPVIAARTDLYAATDEKHDAAKFDAEVPKDKQLSARGIEVGHIFFFGTKYSQSMG 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DGK+ VQMGSYGIG R+V A+IE+SHD GI+WPD+VAPF + LIN+K+ D Sbjct: 299 ALVTGPDGKEVPVQMGSYGIGVSRLVGAIIEASHDDAGIVWPDAVAPFTVGLINLKSGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE IY +L+ G DV +DD E+ G++F+ DL+G P Q+++G + + VE+K Sbjct: 359 ETDAACESIYEKLTAQGIDVLYDDTDERAGAKFSNMDLIGLPWQLVIGPRGLKSGTVELK 418 Query: 420 HRLTGIREDMSLEEVI 435 R TG +E++S E + Sbjct: 419 RRATGEKEELSPEAAL 434 >gi|90423927|ref|YP_532297.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] gi|114152242|sp|Q215F8|SYP_RHOPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|90105941|gb|ABD87978.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] Length = 439 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 244/436 (55%), Positives = 325/436 (74%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+E P++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKETPKEAEIVSHRLMLRAGMMRQEAAGIYAWLPLGLRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE +PTLQ ADLW ESGRYD+YG EMLR+ DR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIECLMPTLQLADLWRESGRYDAYGPEMLRITDRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY+NLP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ SYN+MFV+ Sbjct: 121 YVRSYKNLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEAAARKSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ VFC D ++ P+P ++ D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVFCDSDVLNLPVPGDDVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH+ + F+ +P +K+++ RGIEVG IFYFGTKYS M Sbjct: 241 G--DLTPIIKQWTSVYAATEDVHDAERFEREVPADKKLNTRGIEVGQIFYFGTKYSDKMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D V GSYG+G R+V A+IE+ HD GI WP+ VAPF+ +++N+K Sbjct: 299 ALVAGPDGVDVPVHGGSYGVGVSRLVGAIIEACHDENGIKWPEEVAPFRAAILNLKQGSA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE +Y LS G DV +DD ++ G +FA ADL+G P Q++VG K +++ KVE+K Sbjct: 359 DTDAACEALYKELSAKGVDVLYDDTDQRAGGKFATADLIGIPWQILVGPKGLAEGKVELK 418 Query: 420 HRLTGIREDMSLEEVI 435 R G RE+++ E + Sbjct: 419 RRADGSRENVTPAEAV 434 >gi|83858393|ref|ZP_00951915.1| prolyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] gi|83853216|gb|EAP91068.1| prolyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] Length = 442 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 248/437 (56%), Positives = 325/437 (74%), Gaps = 4/437 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRYFLPVLKETPSDAQIVSHQLMLRAGMIRQEAAGIYAWLPLGLRVLRKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PTLQ ADLW ESGRYD YGKEMLR+ DR+++ ++YGPT+EE++T+IFR Sbjct: 61 QDRAGAIELLMPTLQPADLWRESGRYDDYGKEMLRIVDRHERDLLYGPTNEEMITEIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + +SY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL EG+ +YNKMFV+ Sbjct: 121 YCRSYKDLPKILYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDLDYEGAVKAYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F R+GLKS+PMRA++GPIGG LSHEFI+LA+TGE++VFC +D P P E DFD Sbjct: 181 YLNTFARMGLKSVPMRADTGPIGGKLSHEFIILAETGESEVFCDSRLVDMPAPGE-VDFD 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L V+Q TA YAAT ++H+ F++ +PE +R+SARGIEVGHIF FGTKYS PM Sbjct: 240 G--DLQPYVDQRTALYAATEEMHDAARFEAEVPEERRLSARGIEVGHIFNFGTKYSDPMK 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DGK+ V MGSYG+G R++ A+IE+SHD G+IWP++VAPF +IN++A D Sbjct: 298 AQVAGPDGKETAVHMGSYGVGVSRLLGAIIEASHDENGVIWPEAVAPFGAGVINMRAGDA 357 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 C A ++IY +L G + DD G++FA DL+G P QVIVG + + + K E+K Sbjct: 358 DCAKAADEIYTKLDAAGLEPLLDDTAASAGAKFATMDLIGVPYQVIVGPRGLKEGKAEVK 417 Query: 420 HRLTGIREDMSLEEVIN 436 R +G R ++SLE+ +N Sbjct: 418 IRASGERHELSLEDAVN 434 >gi|114569925|ref|YP_756605.1| prolyl-tRNA synthetase [Maricaulis maris MCS10] gi|122316107|sp|Q0APX0|SYP_MARMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114340387|gb|ABI65667.1| prolyl-tRNA synthetase [Maricaulis maris MCS10] Length = 444 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 244/436 (55%), Positives = 325/436 (74%), Gaps = 2/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P DAEI SH+LMLR GMI Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRYFLPVLKETPSDAEIVSHQLMLRAGMIKQEAAGIYAWLPLGHRVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA+E+ +PT+QSADLW ESGRYD YG EMLR+ DR+D+ M++GPT+EE++TDIFRS Sbjct: 61 QDRAGAVELLMPTIQSADLWRESGRYDDYGDEMLRITDRHDRDMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + KSY+++P Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ SYN+MFV+ Sbjct: 121 YCKSYKDVPKLLYHIQWKFRDERRPRFGVMRGREFLMKDAYSFDVDEAAARRSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F RLGLK++PM+A++GPIGGDLSHEFIVLA+TGE++VFC D ++ P + DFD Sbjct: 181 YLNTFARLGLKAVPMQADTGPIGGDLSHEFIVLAETGESEVFCHADLVEMGAPGLDVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L +V+Q TA YAAT ++H + F ++P ++++SARGIEVGHIF FGTKYS PM A Sbjct: 241 G--DLQPLVDQRTALYAATEEMHQPEEFAAVPADRQLSARGIEVGHIFNFGTKYSEPMKA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T + DG+ V MGSYG+G R++ A+IE+ HD KG IWP+SVAPF +IN++ D+ Sbjct: 299 TVQHQDGQPRPVHMGSYGVGVSRLLGAIIEAHHDEKGCIWPESVAPFGAGIINMRVGDEA 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE Y L K G D +DD + G++FA ADL+G P Q++VG + + + K+E+K Sbjct: 359 CDAACETAYQGLVKAGLDPLYDDTDSRAGAKFATADLIGLPYQLVVGPRGLKEGKIELKV 418 Query: 421 RLTGIREDMSLEEVIN 436 R TG +MS E+ ++ Sbjct: 419 RRTGETHEMSPEDAVS 434 >gi|254294083|ref|YP_003060106.1| prolyl-tRNA synthetase [Hirschia baltica ATCC 49814] gi|254042614|gb|ACT59409.1| prolyl-tRNA synthetase [Hirschia baltica ATCC 49814] Length = 441 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 236/437 (54%), Positives = 325/437 (74%), Gaps = 3/437 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK+FLP+L+E P +A+I SH+LMLR GM+ Q GIY+WLPLG + L + I+REE Sbjct: 1 MRLSKFFLPVLKETPAEAKIISHQLMLRAGMVKQTGSGIYTWLPLGLRVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PT+Q ADLW ESGRYD+YGKEMLR+ DR+D+ M++GPT+EEV+TDIFRS Sbjct: 61 QNRAGAIELLMPTIQPADLWKESGRYDAYGKEMLRITDRHDREMLFGPTNEEVITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ ++ SY KMF + Sbjct: 121 YVKSYKQLPLNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDVNEVEARKSYYKMFCA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F R+GLK++PMRA++GPIGGDLSHEFI+LA+TGE++VFC + ++ P P + D Sbjct: 181 YLNTFSRMGLKAVPMRADTGPIGGDLSHEFIILAETGESEVFCDAELVNMPPPGLDL--D 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L E+ T YAAT ++H++ F+S +PE +RVSARGIEVGHIF FGTKYS PM Sbjct: 239 FDSDLLGEFEKRTQYYAATEEMHDQTKFESEVPEERRVSARGIEVGHIFNFGTKYSEPMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A +GK+ V MGSYG+G R++ A+IE+ HD KG+IWP+ VAPFK +++N++ D+ Sbjct: 299 AKVMTPEGKEAPVHMGSYGVGVSRLLGAIIEACHDDKGVIWPEEVAPFKSAVVNLRQGDE 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 C ACE +YA+L G D +DD ++ G++ + +L+G P +++G + + + VE+K Sbjct: 359 ACDKACEDVYAKLRATGLDPMYDDRDDRPGAKLSTLELIGIPKAIVIGPRGLKNGVVEVK 418 Query: 420 HRLTGIREDMSLEEVIN 436 R++G+ E+MSL+ +N Sbjct: 419 DRISGVTEEMSLDAALN 435 >gi|254488857|ref|ZP_05102062.1| prolyl-tRNA synthetase [Roseobacter sp. GAI101] gi|214045726|gb|EEB86364.1| prolyl-tRNA synthetase [Roseobacter sp. GAI101] Length = 446 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 237/446 (53%), Positives = 321/446 (71%), Gaps = 5/446 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRLMLRAGMIKQSAAGIYSWLPLGFKVLRKIENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD+YG EMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QQRAGHIPMLMPTLQSADLWKESGRYDAYGPEMLRIKDRQDRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D+D Sbjct: 181 YLRSYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSQITELKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+ LF +P++++ +ARGIEVG IFYFGTKYS PM A Sbjct: 241 SVDQCQAVLEEFTSRYARTDETHDAALFSEVPQDRQRTARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D+ Sbjct: 301 TVQGPDGKPTPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDEE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +Y ++ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADSACQALYDSITALGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN-----YASHR 441 R TG E+M+ E+ + YA HR Sbjct: 421 RRTGESEEMAPEDAVQKIAEIYAKHR 446 >gi|329889349|ref|ZP_08267692.1| prolyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568] gi|328844650|gb|EGF94214.1| prolyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568] Length = 438 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 238/437 (54%), Positives = 319/437 (72%), Gaps = 4/437 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L + I+R+E Sbjct: 1 MRLSRYFLPILKEAPSDAQIVSHQLMLRAGMIKQEAAGIYAWLPLGLRVLRKIEGIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q + GA+E+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+++ ++YGPT+EE++TDIFR+ Sbjct: 61 QVKAGAVELLMPTLQLADLWRESGRYDAYGPEMLRITDRHERELLYGPTNEEMVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP + IQ KFRDE RPRFGVMR REFLMKDAYSFDL ++ +Y +MF + Sbjct: 121 YVKSYKALPLNLFHIQWKFRDERRPRFGVMRGREFLMKDAYSFDLDEASARIAYKRMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F RLGLK++PMRA++GPIGGDLSHEFIVLA+TGE++VFC + ++ P N + Sbjct: 181 YLNTFARLGLKAVPMRADTGPIGGDLSHEFIVLAETGESEVFCDRKLVEMAAPGHNLSVE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L + + TA YAAT ++H+ F++ E R+SARGIEVGHIFYFGTKYS M Sbjct: 241 ---QLEGVFNERTALYAATEEMHDAAQFETQTAEGDRLSARGIEVGHIFYFGTKYSAAMK 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G +G+D V MGSYG+G R++ A+IE+SHD GIIWPDSVAPF + +IN++A D+ Sbjct: 298 AKVAGPNGQDTEVHMGSYGVGVSRLLGAIIEASHDEGGIIWPDSVAPFDVVVINLRASDE 357 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE A+L +G DV +DD E+ G +FA ADL+G P Q+ +G K ++D VE+K Sbjct: 358 AVSAACEDAVAKLEALGKDVLYDDTDERPGGKFATADLIGVPWQLTIGPKGLADGVVELK 417 Query: 420 HRLTGIREDMSLEEVIN 436 R TG ++ +SL+ + Sbjct: 418 RRATGEKQSLSLDAALE 434 >gi|119384044|ref|YP_915100.1| prolyl-tRNA synthetase [Paracoccus denitrificans PD1222] gi|152112938|sp|A1B1L0|SYP_PARDP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119373811|gb|ABL69404.1| prolyl-tRNA synthetase [Paracoccus denitrificans PD1222] Length = 450 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 233/435 (53%), Positives = 316/435 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P+L+E+P++A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFMPVLKEDPKEAQIVSHRLMLRAGMIKQQAAGIYSWLPLGYKVLRRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD YG+EMLR+ DR+ + ++YGPT+EE++TDIFRS Sbjct: 61 QARAGHIAMLMPTLQSADLWRESGRYDDYGEEMLRIKDRHKRDLLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y +Q KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVNSYKDLPLTLYHVQWKFRDEIRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF + D D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLKFGDRRIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +++E++T+ YA T + H+ LF+ +P+ +R ARGIEVG IFYFGTKYS PM A Sbjct: 241 DVAQCRAVLEEFTSRYARTDETHDAALFEQIPKERRRVARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG V MGS+GIG R++ A+IE+SHD +GIIWP+ V PF + ++N+K D Sbjct: 301 TVVGPDGSRVPVHMGSHGIGVSRLLGAIIEASHDDRGIIWPEGVTPFHVGIVNLKQGDAS 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +YA L G D +DD E+ G++FA DL+G P ++ VG + ++ +KVE+ Sbjct: 361 TDGACEALYAELKAQGLDALYDDRDERAGAKFATMDLVGLPWRITVGPRGLAANKVELTS 420 Query: 421 RLTGIREDMSLEEVI 435 R TG +MS +E + Sbjct: 421 RRTGESVEMSPQEAV 435 >gi|83942873|ref|ZP_00955333.1| prolyl-tRNA synthetase [Sulfitobacter sp. EE-36] gi|83845881|gb|EAP83758.1| prolyl-tRNA synthetase [Sulfitobacter sp. EE-36] Length = 446 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 237/436 (54%), Positives = 314/436 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRLMLRAGMIKQSAAGIYSWLPLGFKVLRKIETIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGR+D+YG EMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QQRAGHIPMLMPTLQSADLWKESGRFDAYGPEMLRIKDRQDRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ V+ Sbjct: 121 HVGSYKDLPMTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYTFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D+D Sbjct: 181 YLRSYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSQITELKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E LF +P ++ SARGIEVG IFYFGTKYS PM A Sbjct: 241 SVDQCQAVMEEFTSRYARTDETHDEALFAEVPAERQRSARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D+ Sbjct: 301 TVQGPDGKPVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDEQ 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC +YA L +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACNALYASLQALGLDPLYDDTKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG E+M+ E I Sbjct: 421 RRTGESEEMTPEAAIE 436 >gi|83954043|ref|ZP_00962763.1| prolyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] gi|83841080|gb|EAP80250.1| prolyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] Length = 446 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 236/436 (54%), Positives = 315/436 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRLMLRAGMIKQSAAGIYSWLPLGFKVLRKIETIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGR+D+YG EMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QQRAGHIPMLMPTLQSADLWKESGRFDAYGPEMLRIKDRQDRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ V+ Sbjct: 121 HVGSYKDLPMTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYTFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D+D Sbjct: 181 YLRSYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSQITELKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E LF +P ++ SARGIEVG IFYFGTKYS PM A Sbjct: 241 SVDQCQAVMEEFTSRYARTDETHDEALFAEVPAERQRSARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D+ Sbjct: 301 TVQGPDGKPVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDEQ 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +YA L +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDALYASLQALGLDPLYDDTKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG E+M+ E + Sbjct: 421 RRTGESEEMTPEAAVE 436 >gi|254441019|ref|ZP_05054512.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 307] gi|198251097|gb|EDY75412.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 307] Length = 453 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 236/435 (54%), Positives = 312/435 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E+PRDA I SH+ MLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKESPRDATIVSHQYMLRAGMIKQSSAGIYSWLPLGFKVLKRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PT+QSADLW ESGRYD YG EMLR+ DRN ++YGPT+EE++TDIFRS Sbjct: 61 QERAGHIAMLMPTIQSADLWRESGRYDDYGDEMLRITDRNKNDLLYGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY+ LP T Y IQ KFRDE RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKALPLTLYHIQWKFRDERRPRFGVMRGREFYMKDGYTFDLTKEDAMHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDAAVTDLSFGDRDIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ ++E++TA YA T + H++ LFD++P +++ +ARGIEVG IFYFGTKYS M A Sbjct: 241 DVTQCAEVMEEFTAKYARTDETHDQALFDAIPADRQRTARGIEVGQIFYFGTKYSDAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D Sbjct: 301 TVQGPDGKPTPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDAD 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +YA ++ +G + +DD E+ GS+F D++G P ++ VG + + + VE+ Sbjct: 361 ADAACQSLYAAVAALGLEALYDDRDERAGSKFGTMDMIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVI 435 R TG E+M E+ I Sbjct: 421 RKTGESEEMPPEQAI 435 >gi|56696018|ref|YP_166372.1| prolyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] gi|81820109|sp|Q5LUD3|SYP_SILPO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56677755|gb|AAV94421.1| prolyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] Length = 464 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 238/449 (53%), Positives = 322/449 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPAEAQIVSHRLMLRAGMIKQAQAGIYSWLPLGFKVLRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD YG+EMLR+ DR+ + M++GPT+EE++TDIFR Sbjct: 61 QIRAGHIPMLMPTLQSADLWRESGRYDDYGQEMLRITDRHGRDMLFGPTNEELITDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+R + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF D + D+D Sbjct: 181 YIRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSKVTDIRLGEREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E +F+ +PE +R SARGIEVG IFYFGTKYS PM A Sbjct: 241 SVDQCRAVMEEFTSLYARTDETHDEAVFNQIPEERRRSARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQGPDGKPVPVHMGSHGIGVSRLIGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDGE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+++YA LS +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDQLYAALSAIGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNRPVL 449 R TG ++S EE + + ++ + P L Sbjct: 421 RKTGESVELSPEEAVKKVADIYAPHHPHL 449 >gi|163795649|ref|ZP_02189615.1| Prolyl-tRNA synthetase [alpha proteobacterium BAL199] gi|159179248|gb|EDP63781.1| Prolyl-tRNA synthetase [alpha proteobacterium BAL199] Length = 437 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 244/436 (55%), Positives = 315/436 (72%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S YFLP +++ PRDAEI SH+LMLR GMI Q S GIYSWLPLG + L + ++REE Sbjct: 1 MRLSGYFLPTMKDTPRDAEIVSHRLMLRAGMIQQASAGIYSWLPLGLRVLKKIEQVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ G E+ +PT+QSADLW ESGRYD YGKEMLR+ DR+D+ M++GPT+EEV+TDIFR+ Sbjct: 61 QDAAGWQEVLMPTIQSADLWRESGRYDDYGKEMLRIKDRHDRDMLFGPTNEEVITDIFRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H++SY+ LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E +K +YN+ FV+ Sbjct: 121 HVRSYKALPGRLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDFEAAKRAYNRQFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+ F RLGLK+IPM A+SGPIGGDLSHEFI+LADTGE++VFC KD++ D+D Sbjct: 181 YLKTFDRLGLKAIPMAADSGPIGGDLSHEFIILADTGESEVFCHKDWLTSEAVPATVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L IV+ A YAAT + H+ + E V RGIEVGHIFYFGTKYS P+ A Sbjct: 241 --ADLQPIVDACLARYAATDEKHDPATC-PVAEADLVRTRGIEVGHIFYFGTKYSDPLGA 297 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKD V MGSYG+G R+V +IE+SHD GI+WP+ VAPFK+ L+N+K D Sbjct: 298 KVAGPDGKDVTVHMGSYGVGVSRLVGGIIEASHDDAGIVWPEPVAPFKVGLVNLKVGDAA 357 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C A E +Y +L K G +V DD E+ G++ A DL+G P QV+VG + +++ VE+K+ Sbjct: 358 CDSATEGLYGKLLKAGIEVLMDDRDERPGAKLAGMDLIGLPWQVVVGPRGLANGIVEMKN 417 Query: 421 RLTGIREDMSLEEVIN 436 R TG +++M+ + +N Sbjct: 418 RKTGAKDEMTPDAALN 433 >gi|260430967|ref|ZP_05784938.1| prolyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] gi|260414795|gb|EEX08054.1| prolyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] Length = 446 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 239/436 (54%), Positives = 313/436 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRLMLRAGMIKQAAAGIYSWLPLGFKVLRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +P LQSADLW ESGRYD YG+EMLR+ DR+ + M+Y PT EE++TDIFR Sbjct: 61 QIRAGHIPIQMPILQSADLWRESGRYDDYGQEMLRMKDRHGRDMLYTPTAEELVTDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + + D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAVTDIRLGQRDIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +I+E++T+ YA T + H+E LF +PE +R SARGIEVG IFYFGTKYS PM A Sbjct: 241 DKAQCQAIMEEFTSLYARTDETHDEALFQQVPEERRRSARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQGPDGKQVPVHMGSHGIGVSRLIGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+KIY L+ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDKIYKALTALGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG E++S E + Sbjct: 421 RRTGESEELSPEAAVT 436 >gi|89070126|ref|ZP_01157455.1| prolyl-tRNA synthetase [Oceanicola granulosus HTCC2516] gi|89044243|gb|EAR50389.1| prolyl-tRNA synthetase [Oceanicola granulosus HTCC2516] Length = 466 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 241/453 (53%), Positives = 324/453 (71%), Gaps = 5/453 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+IASH+LMLR GMI Q GIYSWLPLG + L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIASHRLMLRAGMIKQAGAGIYSWLPLGYRVLKKIERIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G + +PTLQ+A+LW ESGRYD+YG EMLR+ DR+D+ M+YGPT+EE++TDIFRS Sbjct: 61 QQRAGHHPVLMPTLQTAELWRESGRYDAYGPEMLRIRDRHDRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVASYKDLPLTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLRFGEREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +++ ++T+ YA T + H+E LF +PE +R SARGIEVG IFYFGTKYS PM A Sbjct: 241 DRAQCEAVMAEFTSRYARTDETHDEALFAEVPEARRRSARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R+V A+IE++HD KGI+WP+ V PF + L+N+K D Sbjct: 301 TVQGPDGKPVPVHMGSHGIGVSRLVGALIEANHDDKGIVWPEGVTPFHVGLVNLKTGDGD 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+KIY +L+ G +V +DD E+ G++FA DL+G P +V VG + + + VE+ Sbjct: 361 ADAACQKIYDQLTACGLEVLYDDRDERAGAKFATMDLIGLPWRVTVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN-----YASHRFSNNRPV 448 R TG E+++ + + + YA H RP+ Sbjct: 421 RRTGDSEEIAPDALTDRLCEIYAPHHAHVGRPM 453 >gi|83949530|ref|ZP_00958263.1| prolyl-tRNA synthetase [Roseovarius nubinhibens ISM] gi|83837429|gb|EAP76725.1| prolyl-tRNA synthetase [Roseovarius nubinhibens ISM] Length = 452 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 242/443 (54%), Positives = 321/443 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+LMLR GMI Q S GIYSWLPLG K L N+ I+ EE Sbjct: 1 MRLSRYFLPVLKETPSEAQIVSHRLMLRAGMIKQSSAGIYSWLPLGYKVLRNIETIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD+YG EMLR+ DR D+ M++GPT+EE++TDIFRS Sbjct: 61 QQRVGHIPMLMPTLQSADLWRESGRYDAYGPEMLRIRDRQDRDMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D D D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLTFGEREIDHD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS PM A Sbjct: 241 SHEACQAVLEEFTSRYARTDETHDEALFNQIPEERRRVARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP++VAPF + ++N+K D Sbjct: 301 TVQGPDGKPVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEAVAPFHVGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +YA+++ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDALYAQVAALGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG E++S E I FS Sbjct: 421 RRTGESEELSPEAAIAKLKEHFS 443 >gi|197105248|ref|YP_002130625.1| prolyl-tRNA synthetase [Phenylobacterium zucineum HLK1] gi|226701316|sp|B4RBZ9|SYP_PHEZH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|196478668|gb|ACG78196.1| prolyl-tRNA synthetase [Phenylobacterium zucineum HLK1] Length = 439 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 238/437 (54%), Positives = 321/437 (73%), Gaps = 3/437 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG K L + ++REE Sbjct: 1 MRLSRYFMPTLREAPSDAQIVSHQLMLRAGMIRQEAAGIYAWLPLGLKVLKKIEQVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +PTLQ ADLW ESGRYD YG+EMLR+ DR+++ ++YGPT EEV+TDIFR+ Sbjct: 61 MDRAGAIEVLMPTLQLADLWRESGRYDDYGEEMLRIKDRHERDLLYGPTAEEVITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MF + Sbjct: 121 YIKSYKDLPKNLYNIQWKFRDERRPRFGVMRGREFLMKDAYSFDIDEAAARRAYNRMFCA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL ++ RLGLK+IP+RA++GPIGGDLSHEFI+LADTGE+QVF +D ++ P + D+D Sbjct: 181 YLNVYARLGLKAIPVRADTGPIGGDLSHEFIILADTGESQVFAHRDLVEMGAPGPDIDWD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L +V+Q T YAA+ ++H++ F++ PE+KR++ARGIEVGHIFYFG KYS PM+ Sbjct: 241 G--DLEPLVQQRTRLYAASDEMHDQARFETEAPEDKRMTARGIEVGHIFYFGEKYSRPMN 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + +V MGSYG+G R+V A+IE+SHD GI+WPDSVAPF +++N++ + Sbjct: 299 AKVAGPDGAERFVHMGSYGVGVSRLVGAIIEASHDEAGIVWPDSVAPFGAAVVNLRPGEA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E+ Y L G + DD E+ G++FA DL+G P Q+IVG K V++ VEIK Sbjct: 359 AVDAVAEQAYGALQAAGKEPLLDDRDERPGAKFASLDLVGVPWQLIVGPKGVAEGVVEIK 418 Query: 420 HRLTGIREDMSLEEVIN 436 R TG R+ + L+ + Sbjct: 419 RRATGERQTLPLDAALK 435 >gi|218661849|ref|ZP_03517779.1| prolyl-tRNA synthetase [Rhizobium etli IE4771] Length = 354 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 232/354 (65%), Positives = 293/354 (82%) Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS +KS Sbjct: 1 GAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMVTDIFRSSVKS 60 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 Y++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF +YLR Sbjct: 61 YKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAAYLRT 120 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+ F IP E TDFD + Sbjct: 121 FERLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVGFDIPDERTDFDSVEG 180 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 L +I E+WT+ YAATS++H+E F+++PE+ R+SARGIEVGHIFYFGTKYS M A +G Sbjct: 181 LQAIFEKWTSLYAATSEMHDEAAFNAVPESDRLSARGIEVGHIFYFGTKYSETMGAKVQG 240 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF I +IN+KA DQ C D Sbjct: 241 PDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDIVVINMKAGDQACDDT 300 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 CE IYA L+K G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+ Sbjct: 301 CELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEV 354 >gi|260575893|ref|ZP_05843888.1| prolyl-tRNA synthetase [Rhodobacter sp. SW2] gi|259021819|gb|EEW25120.1| prolyl-tRNA synthetase [Rhodobacter sp. SW2] Length = 445 Score = 514 bits (1325), Expect = e-144, Method: Compositional matrix adjust. Identities = 234/435 (53%), Positives = 315/435 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLTRYFLPVLKENPAEAQIVSHRYMLRAGMIKQQAAGIYSWLPLGFKVLRRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQ ADLW ESGRYD YG+EMLR+ DR + ++YGPT+EE++TDIFRS Sbjct: 61 QQRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRITDRQKRELLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVTSYKDLPLTLYHIQWKFRDEMRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA TGE++VF D + + D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAATGESEVFYDSAVTDIRLGAREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D ++++++T+ YA T + H+E LF+++PE +R SARGIEVG IF+FGTKYS M A Sbjct: 241 DKAQCAAVMQEFTSLYARTDETHDESLFNAIPEERRRSARGIEVGQIFFFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T DG VQMGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D Sbjct: 301 TVVTPDGSRVPVQMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDNG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE IY L G D +DD E+ G++FA DL+G P ++ VG + +++ KVE+ Sbjct: 361 TDAACEAIYKALKARGLDPLYDDRDERAGAKFATMDLIGLPWRITVGPRGLANGKVELTS 420 Query: 421 RLTGIREDMSLEEVI 435 R +G+ E+MS E+ + Sbjct: 421 RRSGVSEEMSAEDAV 435 >gi|84501591|ref|ZP_00999763.1| prolyl-tRNA synthetase [Oceanicola batsensis HTCC2597] gi|84390212|gb|EAQ02771.1| prolyl-tRNA synthetase [Oceanicola batsensis HTCC2597] Length = 445 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 233/436 (53%), Positives = 317/436 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P DA+I SH+ MLR GMI Q S GIYSWLPLG + L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPADAQIVSHRYMLRAGMIKQASAGIYSWLPLGYRVLRRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQSADLW ESGRYD+YG EMLR+ DR+D+ M++GPT+EE++TDIFRS Sbjct: 61 QQRAGHIPLLMPTLQSADLWRESGRYDAYGPEMLRIRDRHDRDMLFGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 YVRSYKDLPMTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E++F+ +PE++R ARGIEVG IFYFGTKYS PM A Sbjct: 241 SVEQCQAVLEEFTSRYARTDETHDEEVFNRIPEDRRRVARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D Sbjct: 301 TVQGPDGKQVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +Y + +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACQALYDGFTALGLDPLYDDRDERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG E++ EE + Sbjct: 421 RRTGESEELPPEEAVR 436 >gi|302383072|ref|YP_003818895.1| prolyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302193700|gb|ADL01272.1| prolyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 437 Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust. Identities = 241/437 (55%), Positives = 322/437 (73%), Gaps = 4/437 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L+ + I+REE Sbjct: 1 MRLSRYFLPTLKEAPSDAQIVSHQLMLRAGMIKQEAAGIYAWLPLGLRVLNRIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+++ ++YGPT+EE++TDIFR Sbjct: 61 QERAGAVELLMPTLQLADLWRESGRYDAYGPEMLRITDRHERELLYGPTNEEMITDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP + IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MFV+ Sbjct: 121 FVKSYKALPLNLFHIQWKFRDERRPRFGVMRGREFLMKDAYSFDIDEASARRAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F R+GLK++PMRA++GPIGGDLSHEFIVLADTGE+QVFC K ++ P P + D++ Sbjct: 181 YLNTFARMGLKAVPMRADTGPIGGDLSHEFIVLADTGESQVFCDKQLVEMPAPGADVDWN 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D L +IV+ T+ YAAT ++H+ F+S + R++ARGIEVGHIFYFGTKYS PM Sbjct: 241 D---LQAIVDGRTSLYAATEEMHDAAQFESQTADGDRLTARGIEVGHIFYFGTKYSAPMK 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG+D V MGSYG+G R++ A+IE+SHD GIIWPD+VAPF + +IN++A+D Sbjct: 298 AKVAGPDGQDTEVHMGSYGVGVSRLLGAIIEASHDDAGIIWPDAVAPFDVVVINLRANDP 357 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +ACE L G V +DD E+ G +FA ADL+G P Q+ +G K V++ VE+K Sbjct: 358 GVCEACEAAVEALEAAGKSVLYDDTDERPGGKFATADLIGIPWQLTIGPKGVAEGVVELK 417 Query: 420 HRLTGIREDMSLEEVIN 436 R +G + + L++ + Sbjct: 418 RRASGEKSTLPLDQAME 434 >gi|126463194|ref|YP_001044308.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] gi|221640237|ref|YP_002526499.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides KD131] gi|166980147|sp|A3PMH0|SYP_RHOS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782913|sp|B9KLX3|SYP_RHOSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|126104858|gb|ABN77536.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] gi|221161018|gb|ACM01998.1| Prolyl-tRNA synthetase [Rhodobacter sphaeroides KD131] Length = 445 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 239/430 (55%), Positives = 308/430 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQQAAGIYSWLPLGFKVLKRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQ ADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QIRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRITDRHKRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDL E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLDYESAIHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA SGPIGGD +HEF+VLA TGE++VF D ++D Sbjct: 181 YLRTYERMGLQAIPMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDLKFGDRVVNYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +IV++WTAPYA T + H+E +F +PE +R S+RGIEVG IFYFGTKYS PM A Sbjct: 241 DRAECEAIVKEWTAPYARTDETHDEAVFGQIPEERRRSSRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T ADG V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVVTADGSRVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHAGIVNLKQGDSS 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y LS G + +DD E+ G++FA DL+G P ++ VG + +S KVE+ + Sbjct: 361 TDLACEALYRDLSARGLEPLYDDRDERAGAKFATMDLIGLPWRITVGPRGISAGKVELTN 420 Query: 421 RLTGIREDMS 430 R TG E+MS Sbjct: 421 RRTGESEEMS 430 >gi|255262231|ref|ZP_05341573.1| prolyl-tRNA synthetase [Thalassiobium sp. R2A62] gi|255104566|gb|EET47240.1| prolyl-tRNA synthetase [Thalassiobium sp. R2A62] Length = 445 Score = 511 bits (1317), Expect = e-143, Method: Compositional matrix adjust. Identities = 232/436 (53%), Positives = 314/436 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP DA+I SH+LMLR GMI Q + GIYSWLPLG K L N+ I+ EE Sbjct: 1 MRLSRYFLPVLKENPADAQIVSHRLMLRAGMIKQSAAGIYSWLPLGYKVLKNIENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q + G + M +PT+QSADLW ESGRYD YG+EMLR+ DR+ + M+Y PT EE++T+IFRS Sbjct: 61 QAKAGHMPMLMPTMQSADLWRESGRYDDYGEEMLRVTDRHGRDMLYTPTAEELITEIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY+++P T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDMPLTLYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + DFD Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAVTDLSFGDRDIDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +I++++T YA T + H+E +F+ +PE +R +ARGIEVG IFYFGTKYS M A Sbjct: 241 SVDQCAAIMQEFTTKYARTDETHDEAVFNEVPEERRRTARGIEVGQIFYFGTKYSDAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D+ Sbjct: 301 TVQGPDGKPVAVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGILNMKQGDED 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ IY + +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 TDAACQAIYDSFAALGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN 436 R T E+M+ E+ + Sbjct: 421 RRTSESEEMTAEQAVE 436 >gi|146276453|ref|YP_001166612.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] gi|166980148|sp|A4WPJ3|SYP_RHOS5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145554694|gb|ABP69307.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 445 Score = 511 bits (1316), Expect = e-143, Method: Compositional matrix adjust. Identities = 236/430 (54%), Positives = 310/430 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG KAL V I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRFMLRAGMIKQQAAGIYSWLPLGFKALKRVEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQ ADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QIRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRITDRHKRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y +Q KFRDE+RPRFGVMR REFLMKD Y+FDL + + H+YN+ VS Sbjct: 121 HVNSYKDLPLTLYHVQWKFRDEIRPRFGVMRGREFLMKDGYNFDLDFDSAIHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA SGPIGGD +HEF+VLA TGE++VF D D+D Sbjct: 181 YLRTYERMGLQAIPMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDLKFGDRVVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +IV++WT PYA T + H+E +F+++PE +R ++RGIEVG IFYFGTKYS PM A Sbjct: 241 SREECEAIVKEWTTPYARTDETHDEAIFNAIPEERRRTSRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T ADG V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D Sbjct: 301 TVVTADGARVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDSS 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y LS G + +DD E+ G++FA DL+G P ++ VG + ++ KVE+ + Sbjct: 361 TDLACEALYRDLSAKGLEPLYDDRDERAGAKFATMDLIGLPWRITVGPRGIAAGKVELTN 420 Query: 421 RLTGIREDMS 430 R TG E+MS Sbjct: 421 RRTGESEEMS 430 >gi|77464352|ref|YP_353856.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] gi|114152244|sp|Q3IZS9|SYP_RHOS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|77388770|gb|ABA79955.1| Prolyl-tRNA synthetase, class IIa [Rhodobacter sphaeroides 2.4.1] Length = 445 Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust. Identities = 238/430 (55%), Positives = 307/430 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQQAAGIYSWLPLGFKVLKRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQ ADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QIRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRITDRHKRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDL E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLDYESAIHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA SGPIGGD +HEF+VLA TGE++VF D ++D Sbjct: 181 YLRTYERMGLQAIPMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDLKFGDRVVNYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +IV++WTAPYA T + H+E +F +PE +R S+RGIEVG IFYFGTKYS PM A Sbjct: 241 DRAECEAIVKEWTAPYARTDETHDEAVFGQIPEERRRSSRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ADG V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 NVVTADGSRVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHAGIVNLKQGDSS 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y LS G + +DD E+ G++FA DL+G P ++ VG + +S KVE+ + Sbjct: 361 TDLACEALYRDLSARGLEPLYDDRDERAGAKFATMDLIGLPWRITVGPRGISAGKVELTN 420 Query: 421 RLTGIREDMS 430 R TG E+MS Sbjct: 421 RRTGESEEMS 430 >gi|84683507|ref|ZP_01011410.1| prolyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84668250|gb|EAQ14717.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654] Length = 444 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 231/435 (53%), Positives = 313/435 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+IASH+LMLR GMI Q + GIYSWLPLG K L N+ I+ EE Sbjct: 1 MRLSRYFLPVLKETPSEAQIASHRLMLRAGMIKQQAAGIYSWLPLGYKVLKNIERIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQSADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFR+ Sbjct: 61 QQRAGHIPILMPTLQSADLWRESGRYDDYGQEMLRITDRHGRDMLYGPTNEEMVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFFMKDGYNFDLTREDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF + D D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + +++E++T+ YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS M A Sbjct: 241 SVEACQAVLEEFTSRYARTDETHDEALFNEIPEERRRVARGIEVGQIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T + +DG V+MGS+GIG R+V A+IE++HD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQDSDGNKVPVEMGSHGIGVSRLVGALIEANHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y L+ G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACETLYKALTAAGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVI 435 R TG E+++ E + Sbjct: 421 RRTGESEELAPEAAV 435 >gi|288958966|ref|YP_003449307.1| prolyl-tRNA synthetase [Azospirillum sp. B510] gi|288911274|dbj|BAI72763.1| prolyl-tRNA synthetase [Azospirillum sp. B510] Length = 437 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 240/435 (55%), Positives = 317/435 (72%), Gaps = 3/435 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +F+P L+E P +A+I SH+LMLR GMI Q S GIY+WLPLG + L + I+REE Sbjct: 1 MRLSSFFMPTLKETPTEAQIVSHRLMLRAGMIRQTSAGIYAWLPLGYRVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PT+QSADLW ESGRYD YGKEMLR+ DR+D+ M++GPT+EE++TDIFRS Sbjct: 61 QDAAGAQELLMPTIQSADLWRESGRYDDYGKEMLRITDRHDREMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ P G++ SY KMF++ Sbjct: 121 FVKSYRQLPLNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDIDPAGARRSYQKMFLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGGDLSHEFI+LA+TGE+ VFC KD+M + + + Sbjct: 181 YLRTFARIGLKAIPMRADTGPIGGDLSHEFIILAETGESGVFCHKDWMTLDVLKDAPGME 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L ++ T YAAT + H+ +P+ VSARGIEVGHIF FGTKYS PM+A Sbjct: 241 D--DLQPFFDRVTGIYAATDEKHDPA-NSPVPDADLVSARGIEVGHIFNFGTKYSKPMNA 297 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G +G+ V+MGSYGIG R++ A+IE+SHD GIIWPD+VAPF + LIN+K+ D Sbjct: 298 VVAGPNGESIPVEMGSYGIGVSRLMGAIIEASHDDNGIIWPDAVAPFNVGLINLKSGDAE 357 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ++YA+L G +V +DD E+ G++FA DL+G P Q++VG + + VE+K Sbjct: 358 TDRVCAELYAKLEAAGLEVAYDDRDERPGAKFADMDLIGVPWQLVVGPRGLKSGVVELKR 417 Query: 421 RLTGIREDMSLEEVI 435 R TG +E++ +E + Sbjct: 418 RATGEKEELPVEAAL 432 >gi|126739185|ref|ZP_01754879.1| prolyl-tRNA synthetase [Roseobacter sp. SK209-2-6] gi|126719802|gb|EBA16510.1| prolyl-tRNA synthetase [Roseobacter sp. SK209-2-6] Length = 451 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 239/445 (53%), Positives = 311/445 (69%), Gaps = 5/445 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+ MLR GMI Q S GIYSWLPLG K L + I+ +E Sbjct: 1 MRLSRYFLPVLKETPSEAQIVSHRYMLRAGMIKQSSAGIYSWLPLGFKVLKKIETIVHDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFR Sbjct: 61 QMRAGHIPMLMPTLQSADLWKESGRYDDYGEEMLRINDRHGRDMLYGPTNEELITDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ V+ Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF D D+D Sbjct: 181 YLRSYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T+ YA T + H+E LF +PE +R ARGIEVG IFYFGTKYS + A Sbjct: 241 SVEQCQGVLEEFTSKYARTDETHDEALFKEIPEERRRVARGIEVGQIFYFGTKYSEALGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T + ADG V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQTADGGSVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACEKIYA LS VG + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEKIYAALSAVGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN-----YASH 440 R TG E+MS EE + YA H Sbjct: 421 RRTGESEEMSPEEAVKKVAEIYAKH 445 >gi|254466898|ref|ZP_05080309.1| prolyl-tRNA synthetase [Rhodobacterales bacterium Y4I] gi|206687806|gb|EDZ48288.1| prolyl-tRNA synthetase [Rhodobacterales bacterium Y4I] Length = 451 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 235/446 (52%), Positives = 316/446 (70%), Gaps = 5/446 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q S GIYSWLPLG K L + +I+ +E Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRLMLRAGMIKQSSAGIYSWLPLGFKVLKKIESIVHDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M + T+Q ADLW ESGRYD YG+EMLR+ DR+D+ M++GPT+EE++TDIFR+ Sbjct: 61 QIRAGHIPMLMATMQPADLWRESGRYDDYGQEMLRIKDRHDRDMLFGPTNEEMITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQ+Q KFRDE+RPRFGVMR REF MKD Y+FDL+ E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTMYQVQWKFRDEIRPRFGVMRGREFYMKDGYNFDLSKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF D + D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGDRDIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS M A Sbjct: 241 SVEQCQAVLEEFTSRYARTDETHDEALFNQIPEERRRVARGIEVGQIFYFGTKYSESMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD GIIWP+ V PF ++N+K D Sbjct: 301 TVQGPDGKPVPVHMGSHGIGVSRLLGAIIEASHDDNGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC ++YA LS G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACNQLYAALSAAGLDPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN-----YASHR 441 R TG E++S EE + Y HR Sbjct: 421 RRTGESEELSPEEAVKKVVSIYEKHR 446 >gi|332559243|ref|ZP_08413565.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] gi|332276955|gb|EGJ22270.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] Length = 445 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 237/430 (55%), Positives = 307/430 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQQAAGIYSWLPLGFKVLKRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQ ADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QIRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRITDRHKRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDL E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLDYESAIHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA SGPIGGD +HEF+VLA TGE++VF D ++D Sbjct: 181 YLRTYERMGLQAIPMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDLKFGDRVVNYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +IV++WTAPYA T + H+E +F +PE +R S+RGIEVG IFYFGTKYS PM A Sbjct: 241 DRAECEAIVKEWTAPYARTDETHDEAIFAQIPEERRRSSRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T A G V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVVTAGGNRVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHAGIVNLKQGDSS 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y LS G + +DD E+ G++FA DL+G P ++ VG + ++ KVE+ + Sbjct: 361 TDLACEALYRDLSARGLEPLYDDRDERAGAKFATMDLIGLPWRITVGPRGIAAGKVELTN 420 Query: 421 RLTGIREDMS 430 R TG E+MS Sbjct: 421 RRTGESEEMS 430 >gi|163737417|ref|ZP_02144834.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] gi|161388943|gb|EDQ13295.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] Length = 451 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 235/446 (52%), Positives = 313/446 (70%), Gaps = 5/446 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQSAAGIYSWLPLGFKVLKKIETIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD YG+EMLR++DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QMRAGHIPMLMPTLQSADLWKESGRYDDYGQEMLRISDRHGRDMLYGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLADTGE++VF D D+D Sbjct: 181 YLRSYERMGLQAIPMRADGGPIGGDYTHEFLVLADTGESEVFYDSAVTDLTFGDRAIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T+ YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS + A Sbjct: 241 SVEQCQGVLEEFTSKYARTDETHDEALFNEVPEERRRVARGIEVGQIFYFGTKYSEALGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 NVQGPDGKQSPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y L+ G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACESLYEALTAAGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN-----YASHR 441 R +G E++S E + YA+H+ Sbjct: 421 RRSGESEELSPEAAVQKIVEIYANHQ 446 >gi|163740902|ref|ZP_02148295.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] gi|161385893|gb|EDQ10269.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] Length = 451 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 235/446 (52%), Positives = 313/446 (70%), Gaps = 5/446 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQSAAGIYSWLPLGFKVLKKIETIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD YG+EMLR++DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QMRAGHIPMLMPTLQSADLWKESGRYDDYGQEMLRISDRHGRDMLYGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLADTGE++VF D D+D Sbjct: 181 YLRSYERMGLQAIPMRADGGPIGGDYTHEFLVLADTGESEVFYDSAVTDLTFGDRAIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T+ YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS + A Sbjct: 241 SVEQCQGVLEEFTSKYARTDETHDEALFNEVPEERRRVARGIEVGQIFYFGTKYSEALGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 NVQGPDGKQSPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y L+ G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACESLYEALTAAGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN-----YASHR 441 R +G E++S E + YA+H+ Sbjct: 421 RRSGESEELSPEAAVQKIVEIYANHQ 446 >gi|99081693|ref|YP_613847.1| prolyl-tRNA synthetase [Ruegeria sp. TM1040] gi|122984229|sp|Q1GFI1|SYP_SILST RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|99037973|gb|ABF64585.1| prolyl-tRNA synthetase [Ruegeria sp. TM1040] Length = 451 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 228/445 (51%), Positives = 322/445 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A++ SH+ MLR GMI Q + GIYSWLPLG + L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPSEAQVVSHRYMLRAGMIKQSAAGIYSWLPLGYRVLKKIEGIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PT+QSADLW ESGRYD+YG+EMLR+ DR+D+ M++ PT EE++TDIFR+ Sbjct: 61 QMRAGHIPMLMPTIQSADLWRESGRYDAYGEEMLRIRDRHDRDMLFTPTAEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ V+ Sbjct: 121 NVSSYKDLPLTMYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF + D + D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLTFGAREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ +++E++T+ YA T + H+E LF+++PE +R ARGIEVG IFYFGTKYS + A Sbjct: 241 NVEQCQAVLEEFTSRYARTDETHDEALFNAVPEERRRVARGIEVGQIFYFGTKYSEALGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T + ADG+ V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQTADGQSVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE++YA L+ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEQLYAALTAIGLEPLYDDRKERAGGKFASMDLIGLPWRITVGPRGLKNGVVEVTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R TG E+MS E+ + + ++N+ Sbjct: 421 RRTGESEEMSPEDAVKKIAAIYANH 445 >gi|296536135|ref|ZP_06898264.1| proline--tRNA ligase [Roseomonas cervicalis ATCC 49957] gi|296263547|gb|EFH10043.1| proline--tRNA ligase [Roseomonas cervicalis ATCC 49957] Length = 436 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 239/435 (54%), Positives = 322/435 (74%), Gaps = 5/435 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+E P +A IASHKLMLR GMI Q S GIY+WLPLG + L V+ I+REE Sbjct: 1 MRLSRAFLPTLKEVPAEAAIASHKLMLRAGMIRQTSAGIYAWLPLGLRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PT+QSA+LW +SGRYD YGKEMLR+ DR+++ M++GPT+EE++TD+F+S Sbjct: 61 QDAAGAQEILMPTIQSAELWKQSGRYDDYGKEMLRITDRHEREMLFGPTNEEMVTDLFKS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + KSYR+LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E ++ SY KMFV+ Sbjct: 121 YAKSYRDLPRNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDIDAEAARLSYKKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGGDLSHEFI+LA+TGE+QV+ KD ++F + ++ D++ Sbjct: 181 YLRTFARMGLKAIPMRADTGPIGGDLSHEFIILAETGESQVYLHKDLLEFDVLAQKPDYE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L+ V+ WT+ YAAT ++H+E +++L +VSARGIEVGHIFYFG KYS M Sbjct: 241 G--DLDPTVDFWTSRYAATDEMHDEAAWNALGAENQVSARGIEVGHIFYFGEKYSKAMGL 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG QMGSYGIG R++ A+IE++HD GI WPD+VAPF+ +++N+K D Sbjct: 299 TVAGPDGNPVIPQMGSYGIGVSRLLGALIEANHDDAGIKWPDAVAPFRCAILNLKPGDLA 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 EK+YA L G D +DD GE+ G +F ADL G+P Q I+G + ++ +E+K Sbjct: 359 TDALSEKLYAAL---GGDAVYDDRGERAGVKFNDADLAGYPWQAIIGPRGAANGIIELKR 415 Query: 421 RLTGIREDMSLEEVI 435 R TG R+++S+E + Sbjct: 416 RATGERQEVSIEAAL 430 >gi|110679326|ref|YP_682333.1| prolyl-tRNA synthetase [Roseobacter denitrificans OCh 114] gi|114152246|sp|Q168E6|SYP_ROSDO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|109455442|gb|ABG31647.1| prolyl-tRNA synthetase [Roseobacter denitrificans OCh 114] Length = 451 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 236/450 (52%), Positives = 314/450 (69%), Gaps = 5/450 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++YF+P+L+ENP +A+I SH+LMLR GMI Q++ GIYSWLPLG K L + I+ EE Sbjct: 1 MRLTRYFMPVLRENPAEAQIVSHRLMLRAGMIKQNAAGIYSWLPLGFKVLRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G + M +PT+QSADLW ESGRYD+YG EMLR+ DR D+ M++GPT+EE++TDIFRS Sbjct: 61 QIRAGHVPMLMPTMQSADLWRESGRYDAYGPEMLRIRDRQDRDMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEMRPRFGVMRGREFFMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAVTDLTFGDRDIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T YA T + H++ LF ++P ++ ARGIEVG IFYFGTKYS M A Sbjct: 241 SVEQCQGVMEEFTNLYARTDETHDQALFAAIPAERQRQARGIEVGQIFYFGTKYSDAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R+V A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 KVQGPDGKPTAVHMGSHGIGVSRLVGAIIEASHDEKGIIWPEGVTPFHCGIVNLKQGDTE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +YA L +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDALYASLRALGLDPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN-----YASHRFSNN 445 R TG ++ EE I YA H S N Sbjct: 421 RKTGESSELPPEEAIEKIAKIYAPHHVSGN 450 >gi|85704335|ref|ZP_01035438.1| prolyl-tRNA synthetase [Roseovarius sp. 217] gi|85671655|gb|EAQ26513.1| prolyl-tRNA synthetase [Roseovarius sp. 217] Length = 451 Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust. Identities = 243/445 (54%), Positives = 316/445 (71%), Gaps = 5/445 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+IASH+LMLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPSEAQIASHRLMLRAGMIKQASAGIYSWLPLGFKILRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQSADLW ESGRYD YG EMLR+ DR+D+ M+YGPT+EE++TDIFR+ Sbjct: 61 QVRAGHIPVLMPTLQSADLWRESGRYDDYGAEMLRIKDRHDRDMLYGPTNEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT + + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKDDALHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + D+ Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAITDLSLGDRVVDYA 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +IV +WT PYA T + H+ L+D++PE +R ++RGIEVG IFYFGTKYS PM A Sbjct: 241 SRAECAAIVTEWTTPYARTDETHDAALYDAIPEARRRASRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R+V A+IE++HD KGIIWP+ V PF ++N+K D Sbjct: 301 NVQGPDGKSVPVHMGSHGIGVSRLVGAIIEANHDDKGIIWPEGVTPFHAGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE IYA L+ +G + +DD E+ G +FA DL+G P ++ VG + + + VE Sbjct: 361 ADAACEAIYASLTALGMEPLYDDRDERAGGKFATMDLIGLPWRITVGPRGLKNGVVEFTS 420 Query: 421 RLTGIREDMSLEEVIN-----YASH 440 R TGI E++ EE + YA H Sbjct: 421 RRTGISEELPPEEAVAKLVQIYAGH 445 >gi|86138530|ref|ZP_01057103.1| prolyl-tRNA synthetase [Roseobacter sp. MED193] gi|85824590|gb|EAQ44792.1| prolyl-tRNA synthetase [Roseobacter sp. MED193] Length = 451 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 232/446 (52%), Positives = 317/446 (71%), Gaps = 5/446 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQSSAGIYSWLPLGFKVLKKLEGIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G + M +PT+QSADLW ESGRYD YG+EMLR+ DR+ + M++ PT EE++TDIFR+ Sbjct: 61 QQRAGHMPMLMPTIQSADLWRESGRYDDYGQEMLRVEDRHGRDMLFTPTAEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ V+ Sbjct: 121 HVSSYKDLPLTMYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF D D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ ++E++T+ YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS ++A Sbjct: 241 NVEQCQGVLEEFTSKYARTDETHDEALFNQVPEERRRVARGIEVGQIFYFGTKYSDALNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQGPDGKPTPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC ++YA ++ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACNQLYAAMTALGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN-----YASHR 441 R TG E++S E+ + YASH+ Sbjct: 421 RRTGESEELSPEDAVKKVAAIYASHQ 446 >gi|254511426|ref|ZP_05123493.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] gi|221535137|gb|EEE38125.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] Length = 456 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 233/435 (53%), Positives = 312/435 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 11 MRLSRYFLPVLKENPSEAQIVSHRLMLRAGMIKQAAAGIYSWLPLGFKVLRKLENIVHEE 70 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +P LQSADLW ESGRYD YG+EMLR+ DR+D+ M++ PT EE++TDIFR Sbjct: 71 QARAGHIAIQMPILQSADLWRESGRYDGYGQEMLRMKDRHDRDMLFTPTAEELVTDIFRG 130 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 131 HVSSYKDLPLTLYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTMEDALHAYNRHLVS 190 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF D + D+D Sbjct: 191 YLRTYERMGLQAIPMRADSGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGDRDIDYD 250 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +I++++T+ YA T + H+E LFD +PE++R ARGIEVG IFYFGT YS M A Sbjct: 251 NRDQCQAIMDEFTSKYARTDETHDEALFDQVPEDRRRVARGIEVGQIFYFGTNYSEAMGA 310 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 311 TVQGPDGKPVPVHMGSHGIGVSRLIGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 370 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +YA L+ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 371 ADAACDTLYAALTALGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 430 Query: 421 RLTGIREDMSLEEVI 435 R TG E++S E + Sbjct: 431 RRTGESEELSPEAAV 445 >gi|260428562|ref|ZP_05782541.1| prolyl-tRNA synthetase [Citreicella sp. SE45] gi|260423054|gb|EEX16305.1| prolyl-tRNA synthetase [Citreicella sp. SE45] Length = 447 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 234/435 (53%), Positives = 310/435 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+ MLR GMI Q S GIYSWLP+G K L + II EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIVSHRYMLRAGMIKQASAGIYSWLPMGFKVLRKIENIIHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PT+QSA+LW ESGRYD+YG EMLR+ DR+D+ M++ PT EE++TDIFR+ Sbjct: 61 QQRAGHIPMLMPTIQSAELWRESGRYDAYGAEMLRITDRHDREMLFTPTAEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SYR+LP T YQIQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 NVSSYRDLPLTMYQIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF D D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSQITDLKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +++E++T+ YA T + H+E +F+ +PE +R ARGIEVG IFYFGTKYS P+ A Sbjct: 241 SREQCQAVLEEFTSRYARTDETHDEAVFNQVPEERRRVARGIEVGQIFYFGTKYSEPLGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T ADG V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVADADGNQVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKTGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACEKI+A L +G D +DD E+ G++FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEKIHAALIALGLDPLYDDTTERAGAKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVI 435 R TG E+M E + Sbjct: 421 RRTGESEEMPPEAAV 435 >gi|149201764|ref|ZP_01878738.1| prolyl-tRNA synthetase [Roseovarius sp. TM1035] gi|149144812|gb|EDM32841.1| prolyl-tRNA synthetase [Roseovarius sp. TM1035] Length = 451 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 240/451 (53%), Positives = 320/451 (70%), Gaps = 2/451 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+IASH+LMLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIASHRLMLRAGMIKQASAGIYSWLPLGFKILRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQSADLW ESGRYD YG EMLR+ DR+D+ M+YGPT+EE++TDIFR+ Sbjct: 61 QVRAGHIPVLMPTLQSADLWRESGRYDDYGAEMLRIKDRHDRDMLYGPTNEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + D+ Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAITDLRLGGRVVDYA 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +IV +WT PYA T + H+ L++++PE +R ++RGIEVG IFYFGTKYS PM A Sbjct: 241 SRAECEAIVTEWTTPYARTDETHDAALYEAIPEARRRASRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R++ A+IE++HD KGIIWP+ V PF ++N+K D Sbjct: 301 NVQGPDGKSVPVHMGSHGIGVSRLIGAIIEANHDDKGIIWPEGVTPFHAGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +YA L +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEALYASLVALGMEPLYDDRDERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNN--RPVL 449 R TGI E++ E+ + + ++ + RP L Sbjct: 421 RRTGISEELPPEQAVEKLAQIYAGHVLRPSL 451 >gi|126725673|ref|ZP_01741515.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] gi|126704877|gb|EBA03968.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] Length = 470 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 230/445 (51%), Positives = 314/445 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP DA+I SH+LMLR GMI Q S GIYSWLPLG K L N+ I+ EE Sbjct: 26 MRLSRYFLPVLKENPADAQIVSHRLMLRAGMIKQASAGIYSWLPLGLKVLRNIERIVHEE 85 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q + G I + +PT+QSADLW ESGRYD YG+EMLR++DR+ M+YGPT+EE +TDIFR+ Sbjct: 86 QAKAGHIPVLMPTVQSADLWRESGRYDDYGEEMLRISDRHGHDMLYGPTNEEQITDIFRA 145 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE RPRFGVMR REFLMKD Y+FD+ + + H+YN+ V+ Sbjct: 146 HVHSYKDLPLTLYQIQWKFRDERRPRFGVMRGREFLMKDGYNFDIDYDSAMHAYNRHMVA 205 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GLK+IPMRA+SGPIGG+ +HEF+VLADTGE++VF D +D DFD Sbjct: 206 YLRTYERMGLKAIPMRADSGPIGGEDTHEFLVLADTGESEVFYDSDILDLNFGDRVVDFD 265 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ + +V +WT PYA T + H+E L++ +PE +R S+RGIEVG IFYFGTKYS M A Sbjct: 266 DVSACAEVVTEWTTPYARTDETHDEALYNDIPEARRKSSRGIEVGQIFYFGTKYSDSMGA 325 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + V MGS+GIG R++ A+IE+SHD GIIWP+ V PF ++N++ D+ Sbjct: 326 SVVDGEQNKVPVHMGSHGIGVSRLLGAIIEASHDDNGIIWPEGVTPFHCGIVNLRQGDEA 385 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC +Y L+ G + +DD E+ G++FA DL+G P ++ VG + + + VE+ Sbjct: 386 TDGACGALYEALTAAGLEPLYDDRNERAGAKFATMDLIGLPWRITVGPRGLKNGVVELTS 445 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R TG +++S+E + + N+ Sbjct: 446 RRTGESQELSIEAAVEAVVKVYENH 470 >gi|259416086|ref|ZP_05740006.1| prolyl-tRNA synthetase [Silicibacter sp. TrichCH4B] gi|259347525|gb|EEW59302.1| prolyl-tRNA synthetase [Silicibacter sp. TrichCH4B] Length = 451 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 227/445 (51%), Positives = 321/445 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A++ SH+ MLR GMI Q + GIYSWLPLG + L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPSEAQVVSHRYMLRAGMIKQSAAGIYSWLPLGYRVLKKIEGIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PT+QSADLW ESGRYD+YG+EMLR+ DR+D+ M++ PT EE++TDIFRS Sbjct: 61 QMRAGHIPMLMPTIQSADLWRESGRYDAYGEEMLRIRDRHDRDMLFTPTAEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ V+ Sbjct: 121 NVSSYKDLPLTMYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF + D + D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLSFGAREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E LF+++PE++R ARGIEVG IFYFGTKYS + A Sbjct: 241 SVEQCQAVLEEFTSRYARTDETHDEALFNAVPEDRRRVARGIEVGQIFYFGTKYSEALGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T + A+G V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQTAEGDSVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE++YA L+ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEQLYAALTAIGLEPLYDDRKERAGGKFASMDLIGLPWRITVGPRGLKNGVVEVTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R +G E+MS E+ + + ++N+ Sbjct: 421 RRSGESEEMSPEDAVKKIAAIYANH 445 >gi|159043296|ref|YP_001532090.1| prolyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] gi|189083497|sp|A8LQU6|SYP_DINSH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157911056|gb|ABV92489.1| prolyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] Length = 445 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 234/444 (52%), Positives = 309/444 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+LMLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIVSHRLMLRAGMIKQASAGIYSWLPLGYKVLRRIEEIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QQRAGHIPMLMPTLQSADLWRESGRYDDYGQEMLRITDRHGRDMLYGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 NVGSYKDLPLTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEAALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF + D D+D Sbjct: 181 YLRSYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDAEITDLSFGDRQIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +++E++T+ YA T + H+ F +PE +R SARGIEVG IFYFGTKYS M A Sbjct: 241 DVGQCQAVLEEFTSRYARTDETHDPDAFAKVPEARRRSARGIEVGQIFYFGTKYSDAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T D V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVIDKDQNQVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y L+K G + +DD E+ G +FA DL+G P ++ VG + + VE+ Sbjct: 361 ADAACEGLYDALTKAGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKAGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R TG E++S E + R++ Sbjct: 421 RKTGESEELSPEAAVAKVVARYAG 444 >gi|163745976|ref|ZP_02153335.1| prolyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] gi|161380721|gb|EDQ05131.1| prolyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] Length = 446 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 234/436 (53%), Positives = 311/436 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q S GIYSWLPLG K L V I+ +E Sbjct: 1 MRLSQYFLPVLKENPAEAQIVSHRLMLRAGMIKQSSAGIYSWLPLGYKVLRKVEEIVHQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD+YG EMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QQRVGHIPMLMPTLQSADLWKESGRYDAYGPEMLRIRDRQDRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D + D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLTFGNREIDPS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + ++++++T+ YA T + H+ +LF +PE ++ +ARGIEVG IFYFGTKYS M+A Sbjct: 241 DHDACRAVLDEFTSRYARTDETHDPELFAKVPEERQRTARGIEVGQIFYFGTKYSDAMNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 KVQGPDGKQVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHAGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y L +G D +DD G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEALYKSLKALGLDPLYDDRKGGAGMKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN 436 R TG E++ E+ + Sbjct: 421 RRTGESEELPPEQAVE 436 >gi|114764030|ref|ZP_01443271.1| prolyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601] gi|114543622|gb|EAU46636.1| prolyl-tRNA synthetase [Roseovarius sp. HTCC2601] Length = 445 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 231/435 (53%), Positives = 310/435 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+ MLR GMI Q S GIYSWLPLG K L + II EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIVSHRYMLRAGMIKQASAGIYSWLPLGYKVLRKIENIIHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PT+QSADLW ESGRYD+YG EMLR+ DR+D+ M+Y PT EE++TDIFR+ Sbjct: 61 QARAGHIPMLMPTIQSADLWRESGRYDAYGAEMLRITDRHDRDMLYTPTAEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SYR+LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 NVSSYRDLPLTMYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + + D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITELKFGDRAIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E +F+ +PE +R +ARGIEVG IFYFGTKYS M A Sbjct: 241 SVEQCQAVLEEFTSRYARTDETHDEAVFNQVPEARRRTARGIEVGQIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T DG V MGS+GIG R++ A+IE+SHD +GIIWP+ V PF ++N+K D Sbjct: 301 TVSDKDGNQVPVHMGSHGIGVSRLLGAIIEASHDDRGIIWPEGVTPFHCGIVNLKTGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+KI+A L +G D +DD E+ G++FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDKIHAALIALGLDPLYDDTNERAGAKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVI 435 R TG E++ E + Sbjct: 421 RRTGESEELPPEAAV 435 >gi|294084092|ref|YP_003550850.1| prolyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663665|gb|ADE38766.1| prolyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 437 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 233/437 (53%), Positives = 320/437 (73%), Gaps = 8/437 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P++A+IASH+LMLR GM+ Q S GIYSWLPLG++ LD + I+REE Sbjct: 1 MRLSQYFLPLLKETPKEAQIASHRLMLRAGMVQQSSAGIYSWLPLGKRVLDKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PT+Q A+LW ESGRYD YG EMLR+ DR+++ M+YGPT+EE +TDIFR+ Sbjct: 61 QNRAGALEILMPTIQPAELWQESGRYDDYGAEMLRIVDRHERNMLYGPTNEEQITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H++SY+ LP Y IQ KFRDE+RPRFG+MR REFLMKDAYSFDL + ++ +YN+MFVS Sbjct: 121 HVRSYKALPLNMYHIQWKFRDEVRPRFGIMRGREFLMKDAYSFDLDGDKARAAYNRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+ F R+GL +IPM A++GPIGGD+SHEFI+LA+TGE+ V+ KD+M+ + + D D Sbjct: 181 YLKTFARMGLTAIPMEADTGPIGGDMSHEFIILAETGESGVYFHKDWMNINL---DADID 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPM 298 L V+++T+ YA D+H+ D+ P ++ +S RGIE+GHIFYFGTKYS M Sbjct: 238 YNADLQPFVDKYTSLYARADDMHDA---DNCPVTADELMSLRGIEIGHIFYFGTKYSEAM 294 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT G DGK V MGSYGIG R+V +IE+SHD KGIIWPDSVAPF ++++N+K D Sbjct: 295 GATVSGPDGKAVPVHMGSYGIGVSRLVGGIIEASHDDKGIIWPDSVAPFGVAIVNLKPGD 354 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 VC E++Y + G + DD ++ G++ A DL+G P Q++VG + + ++ VE+ Sbjct: 355 AVCDAEAERLYEQFDNAGLEPLLDDRNDRPGAKMASMDLIGIPWQIVVGPRGMENNMVEV 414 Query: 419 KHRLTGIREDMSLEEVI 435 K R TG +MS + + Sbjct: 415 KRRKTGETAEMSPDSAV 431 >gi|114769540|ref|ZP_01447166.1| prolyl-tRNA synthetase [alpha proteobacterium HTCC2255] gi|114550457|gb|EAU53338.1| prolyl-tRNA synthetase [alpha proteobacterium HTCC2255] Length = 446 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 230/432 (53%), Positives = 314/432 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYFLPIL+ENP DA+IASH+LMLR GMI Q GIYSWLP+G K L + I+ +E Sbjct: 1 MRLSKYFLPILKENPSDAQIASHRLMLRAGMIRQAQSGIYSWLPMGYKVLRKLENIVHDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G M +PT+QSADLW ESGRYD YGKEMLR+ DR+ + M++GPT+EE++TDIFR+ Sbjct: 61 QIRAGHNPMLMPTIQSADLWRESGRYDDYGKEMLRITDRHGRDMLFGPTNEELITDIFRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDL E + HSYN+ VS Sbjct: 121 SVKSYKDLPMTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLNKEAAMHSYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+G+K+IPMRA+SGPIGG+ +HEF+VLADTGE++VF ++ +D + + D++ Sbjct: 181 YLRTYERMGMKAIPMRADSGPIGGEDTHEFLVLADTGESEVFFDRNILDLSLGDKEIDYN 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + SI ++WT PYA T + HN +LF +P+ +++++RGIEVG IFYFGTKYS M+A Sbjct: 241 NWDECASIFKEWTTPYARTDETHNPELFAKIPDERQMTSRGIEVGQIFYFGTKYSESMNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + V MGS+GIG R+V A+IE+SHD GIIWP++V+PF + ++N+K D Sbjct: 301 KVSTPNDGEIPVHMGSHGIGVSRMVGAIIEASHDENGIIWPEAVSPFGVGIVNLKQGDDQ 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y S +G D +DD E+ G++FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADLACENLYKSASLLGIDPLYDDRSERAGAKFASMDLIGLPWRITVGPRGLKNGVVELTC 420 Query: 421 RLTGIREDMSLE 432 R TG+ E++ E Sbjct: 421 RRTGVSEELPPE 432 >gi|294677986|ref|YP_003578601.1| prolyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] gi|294476806|gb|ADE86194.1| prolyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] Length = 446 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 234/446 (52%), Positives = 311/446 (69%), Gaps = 5/446 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPAEAQIVSHRLMLRAGMIKQQAAGIYSWLPLGFKVLKRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQ ADLW ESGRYD YG+EMLR+ DR+++ M+YGPT+EE++TDIFR+ Sbjct: 61 QIRAGHIPLLMPTLQPADLWRESGRYDDYGQEMLRIKDRHEREMLYGPTNEEMITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEVRPRFGVMRGREFYMKDGYNFDLTREDALHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL +IPMRA SGPIGGD +HEF+VLA TGE++VF D + D+D Sbjct: 181 YLRTYERMGLTAIPMRAASGPIGGDNTHEFLVLAQTGESEVFYDAQVPDLKLGDRAVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + +I +++T YA T + H+E +F+ +PE +R RGIEVG IFYFGTKYS M A Sbjct: 241 DRDQVAAICQEFTTLYARTDETHDEAVFNQIPEARRCVGRGIEVGQIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T DG V+MGS+GIG R++ A+IE++HD +GIIWP+ V PF + ++N+K D Sbjct: 301 TVVTPDGTRVPVEMGSHGIGVSRLLGALIEANHDERGIIWPEGVTPFHVGIVNLKQGDGA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC IY L G D +DD E+ G++FA DL+G P ++ VG + ++ VE+ Sbjct: 361 TDAACAGIYKALVAKGLDPLYDDRDERAGAKFATMDLIGLPWRITVGPRGLAGGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN-----YASHR 441 R TG E+MS E ++ YA+HR Sbjct: 421 RRTGESEEMSAEAAVDRIAQIYAAHR 446 >gi|40063567|gb|AAR38356.1| prolyl-tRNA synthetase [uncultured marine bacterium 582] Length = 445 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 224/435 (51%), Positives = 308/435 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P+L+ENP DA+I SH+LMLR GMI Q S GIYSWLP+G K L + I+ EE Sbjct: 1 MRLSRYFMPVLKENPVDAQIVSHRLMLRAGMIKQSSAGIYSWLPMGFKVLKKIEDIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G + M +PT+QSADLW ESGRYD++G EMLR+ DR+D+ M++ PT EE++TDIFR+ Sbjct: 61 QQRAGHMPMLMPTIQSADLWRESGRYDAFGDEMLRIKDRHDRDMLFTPTAEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEAALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SG +GGD +HEF+VLA+TGE++VF D D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGAMGGDNTHEFLVLAETGESEVFYDSAVTDLTFGDRAIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS ++A Sbjct: 241 SVAQCQGVLEEFTTKYARTDETHDEALFNQIPEERRRVARGIEVGQIFYFGTKYSEALNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D+ Sbjct: 301 TVDDGQGGKTPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDEA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +Y+ L+ G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDGLYSALTNAGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVEVTS 420 Query: 421 RLTGIREDMSLEEVI 435 R +G+ E+M+ E + Sbjct: 421 RRSGVSEEMTPEAAV 435 >gi|241761006|ref|ZP_04759095.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753028|ref|YP_003225921.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|241374625|gb|EER64086.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552391|gb|ACV75337.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 443 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 236/436 (54%), Positives = 316/436 (72%), Gaps = 2/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+++E P DA+I SHKLMLR GMI Q + GIY+WLPLG + L + IIREE Sbjct: 1 MRLSRYFLPVMKETPADAQIISHKLMLRAGMIRQTAAGIYAWLPLGLRVLRRIEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PTLQ+ADLW ESGRYD+YG EMLR+ DR+++ ++YGPT+EE++T + R Sbjct: 61 QARAGALELLMPTLQTADLWRESGRYDAYGPEMLRIKDRHNRELLYGPTNEEMITALIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SYR+LP FY IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ +H+YN+MFV+ Sbjct: 121 NLQSYRDLPRIFYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDIDETAGRHNYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F RLGL++IPM+A++GPIGGDLSHEFIVLA GE+ VF ++ + P DFD Sbjct: 181 YLNSFSRLGLRAIPMQADTGPIGGDLSHEFIVLAPNGESDVFYHSNW-EQPTRHIEADFD 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +L SIV + YAAT D + L ++ +K +RGIEVGHIF+FGTKYS PM Sbjct: 240 DPKALQSIVNDHISDYAAT-DEKRDPLREAQAGDKLRQSRGIEVGHIFFFGTKYSKPMGF 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DGK +QMGSYGIG R++ A+IE+SHD GIIWP++VAP+ + LIN++ D+ Sbjct: 299 TLPGPDGKPIPIQMGSYGIGISRLLGAIIEASHDDNGIIWPEAVAPYHVGLINLRIDDEN 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CR + +Y RL G D +DD E+ G++FA DL+G P QV++G K VE+K+ Sbjct: 359 CRAIADSLYQRLEAAGIDTLYDDRNERGGAKFATMDLIGLPWQVVIGPKGAEKGVVELKN 418 Query: 421 RLTGIREDMSLEEVIN 436 R +G ++ +S+E+ N Sbjct: 419 RASGEKQTISVEDAFN 434 >gi|306841942|ref|ZP_07474620.1| prolyl-tRNA synthetase [Brucella sp. BO2] gi|306287975|gb|EFM59383.1| prolyl-tRNA synthetase [Brucella sp. BO2] Length = 400 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 227/394 (57%), Positives = 299/394 (75%) Query: 43 LPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK 102 +P+G K L+ V IIREEQNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ Sbjct: 1 MPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQER 60 Query: 103 AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 M++GPT+EE++TDIFRS+++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYS Sbjct: 61 EMLFGPTNEEMVTDIFRSYVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYS 120 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 FDL EG+K +Y +MFVSYLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+ Sbjct: 121 FDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVY 180 Query: 223 CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 C + ++D +P +TDF + L IV +WT PYAAT ++H+E + + +VSARGI Sbjct: 181 CDRAYLDLAVPGADTDFRNDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGI 240 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 EVGHIF+FGTKYS PM A +G DGK+H V MGSYGIG R+VAA IE+SHD GI+WP Sbjct: 241 EVGHIFHFGTKYSEPMGAKVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIVWPK 300 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPL 402 ++APF ++N+K D+ C EK+Y L+ G D DD E+ G++FA DL+G P Sbjct: 301 AIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPT 360 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 QVIVG + V+ +VE+K R TG R+ + ++ IN Sbjct: 361 QVIVGPRGVAAGEVEVKDRKTGERQSLGIDAAIN 394 >gi|304319826|ref|YP_003853469.1| prolyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] gi|303298729|gb|ADM08328.1| prolyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] Length = 446 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 229/437 (52%), Positives = 316/437 (72%), Gaps = 3/437 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ +LP+L+E P +A IASH+LMLR+GM+ Q + GIY+WLPLG K L V AI+REE Sbjct: 1 MKLSRTYLPLLKETPAEAVIASHRLMLRSGMVRQQAAGIYAWLPLGLKVLKKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G E+ +PT+Q A LW +SGRYD+YG EMLRL DR+ + M+YGPT+EE++T++ R+ Sbjct: 61 QERAGVAELLMPTIQPASLWHQSGRYDAYGPEMLRLKDRHGRDMLYGPTNEEMITELVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T + IQ KFRDE+RPRFGVMR REFLMKDAYSFDL+PE ++ SY + F + Sbjct: 121 GIKSYKELPKTLFHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLSPEAARRSYLRFFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG+K+IP+RA++GPIGG LSHEF+VLA+TGE++VF +K ++ P + D+D Sbjct: 181 YLRTFARLGVKAIPVRADTGPIGGKLSHEFVVLAETGESEVFTAKGLVEKTPPPTSLDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +WT YAAT ++H+E F +LPE++R+ ARGIEVGHIFYFGTKYS PM Sbjct: 241 G--DLEPLFAEWTGTYAATDEMHDEAAFLALPEDQRLQARGIEVGHIFYFGTKYSEPMQF 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DG+ +V+MGSYGIG R+V A+IE+ HD +G WP VAP+++ L+N+K Sbjct: 299 AVEGPDGR-AFVEMGSYGIGVSRLVGALIEAHHDDQGCRWPVPVAPYEVGLVNLKTGHDG 357 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC ++Y G DV DD G++ G +FA DL+G PL V +G + V + E+K Sbjct: 358 TDGACHRLYDEAVAAGLDVLLDDSGDRAGEKFARMDLIGLPLIVTIGPRGVEAGQAEVKD 417 Query: 421 RLTGIREDMSLEEVINY 437 R TG ++++ L +++Y Sbjct: 418 RRTGAKQEVPLTGLVDY 434 >gi|283856263|ref|YP_162195.2| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|292495061|sp|P75000|SYP_ZYMMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|283775258|gb|AAV89084.2| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 443 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 236/436 (54%), Positives = 314/436 (72%), Gaps = 2/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+++E P DA+I SHKLMLR GMI Q + GIY+WLPLG + L + IIREE Sbjct: 1 MRLSRYFLPVMKETPADAQIISHKLMLRAGMIRQTAAGIYAWLPLGLRVLRRIEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PTLQ+ADLW ESGRYD+YG EMLR+ DR+++ ++YGPT+EE++T + R Sbjct: 61 QARAGALELLMPTLQTADLWRESGRYDAYGPEMLRIKDRHNRELLYGPTNEEMITALIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SYR+LP FY IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ +H+YN+MFV+ Sbjct: 121 NLQSYRDLPRIFYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDIDETAGRHNYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F RLGL++IPM+A++GPIGGDLSHEFIVLA GE+ VF ++ + P DFD Sbjct: 181 YLNSFSRLGLRAIPMQADTGPIGGDLSHEFIVLAPNGESDVFYHSNW-EQPTRHIEADFD 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +L SIV + YAAT D + L ++ +K +RGIEVGHIF+FGTKYS PM Sbjct: 240 DPKALQSIVNDHISDYAAT-DEKRDPLREAQAGDKLRQSRGIEVGHIFFFGTKYSKPMGF 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DGK +QMGSYGIG R++ A+IE+SHD GIIWP++VAP+ + LIN++ D+ Sbjct: 299 TLPGPDGKPIPIQMGSYGIGISRLLGAIIEASHDDNGIIWPEAVAPYHVGLINLRIDDEN 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CR + +Y RL G D +DD E+ G++FA DL+G P QV++G K VE+K+ Sbjct: 359 CRAIADSLYQRLEAAGIDTLYDDRNERGGAKFATMDLIGLPWQVVIGPKGAEKGVVELKN 418 Query: 421 RLTGIREDMSLEEVIN 436 R G ++ +S+E N Sbjct: 419 RANGEKQTISVENAFN 434 >gi|310815331|ref|YP_003963295.1| prolyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] gi|308754066|gb|ADO41995.1| prolyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] Length = 445 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 231/433 (53%), Positives = 314/433 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q S GIY+WLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPAEAQILSHRYMLRAGMIKQESAGIYAWLPLGYKVLSRLEKIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQSADLW ESGRYD+YG EMLR+ DRN + M++GPT+EE++TDIFRS Sbjct: 61 QQRAGHIPLLMPTLQSADLWRESGRYDAYGPEMLRMTDRNKREMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 YVRSYKDLPLTLYHIQWKFRDEMRPRFGVMRGREFLMKDGYNFDLTREDALHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL +IPMRA+SGPIGGD +HEF+VLA+TGE++VF +D + ++D Sbjct: 181 YLRTYERMGLTAIPMRADSGPIGGDDTHEFLVLANTGESEVFYDEDVTRLKLGERAINYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + +I +++T PYA T + H+ LFD++PE +R RGIEVG IFYFGTKYS PM A Sbjct: 241 NREEVAAICQEFTTPYARTDETHDAALFDAIPEGRRKVGRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T + A+GK V+MGS+GIG R++ A+IE++HD KGIIWP+ V PF + ++N+K D Sbjct: 301 TVQNAEGKQVPVEMGSHGIGVSRLIGALIEANHDDKGIIWPEGVTPFHVGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE ++ +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEALHDSFVALGLDPLYDDRDERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEE 433 R TG+ E++ EE Sbjct: 421 RRTGVSEELPPEE 433 >gi|254474756|ref|ZP_05088142.1| prolyl-tRNA synthetase [Ruegeria sp. R11] gi|214028999|gb|EEB69834.1| prolyl-tRNA synthetase [Ruegeria sp. R11] Length = 450 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 230/446 (51%), Positives = 312/446 (69%), Gaps = 6/446 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQSAAGIYSWLPLGFKVLKKIEGIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M + T+Q ADLW ESGRYD YG+EMLR+ DR+D+ M++GPT+EE++TDIFR+ Sbjct: 61 QMRAGHIPMLMSTMQPADLWRESGRYDDYGQEMLRIKDRHDRDMLFGPTNEEMITDIFRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQ+Q KFRDE+RPRFGVMR REF MKD Y+FDL+ E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTMYQVQWKFRDEIRPRFGVMRGREFYMKDGYNFDLSKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF D D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T+ YA T + H+E LF+ +PE++R ARGIEVG IFYFGTKYS M A Sbjct: 241 SVEQCQGVLEEFTSKYARTDETHDEALFNEIPEDRRRVARGIEVGQIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DG+ V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D+ Sbjct: 301 KVQTPDGEVP-VHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDEA 359 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y L G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 360 ADGACEDLYKALVAAGLDPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 419 Query: 421 RLTGIREDMSLEEVIN-----YASHR 441 R TG E+++ E + YA+HR Sbjct: 420 RRTGESEELAPEAAVAKIIEIYANHR 445 >gi|163733470|ref|ZP_02140913.1| prolyl-tRNA synthetase [Roseobacter litoralis Och 149] gi|161393258|gb|EDQ17584.1| prolyl-tRNA synthetase [Roseobacter litoralis Och 149] Length = 451 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 233/450 (51%), Positives = 315/450 (70%), Gaps = 5/450 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++YF+P+L+ENP +A+I SH+LMLR GMI Q++ GIYSWLPLG K L + I+ EE Sbjct: 1 MRLTRYFMPVLRENPAEAQIVSHRLMLRAGMIKQNAAGIYSWLPLGFKVLRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G + M +PT+QSADLW ESGRYD+YG EMLR+ DR D+ M++GPT+EE++TDIFRS Sbjct: 61 QIRAGHVPMLMPTMQSADLWRESGRYDAYGPEMLRIRDRQDRDMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEMRPRFGVMRGREFFMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAVTDLTFGDRDIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T YA T + H++ LFD++P ++ ARGIEVG IFYFGTKYS M A Sbjct: 241 SVAQCQGVMEEFTNLYARTDETHDQALFDAIPAERQRKARGIEVGQIFYFGTKYSDAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R+V A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 KVQGPDGKPTAVHMGSHGIGVSRLVGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +Y L +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDALYTSLRALGLDPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVIN-----YASHRFSNN 445 R +G +M E+ + YA+H + N Sbjct: 421 RKSGESVEMPPEQAVEKIASIYATHHVTGN 450 >gi|126728909|ref|ZP_01744724.1| prolyl-tRNA synthetase [Sagittula stellata E-37] gi|126710839|gb|EBA09890.1| prolyl-tRNA synthetase [Sagittula stellata E-37] Length = 445 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 233/445 (52%), Positives = 315/445 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+LMLR GMI Q GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPSEAQIVSHRLMLRAGMIKQAQAGIYSWLPLGYKVLKKIENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQSADLW ESGRY++YG+EMLR+ DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QQRAGHIPLLMPTLQSADLWRESGRYEAYGEEMLRITDRHGRDMLYGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 YVRSYKDLPLTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF + D + + D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLKFGTRDIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + S++E++T+ YA T + H+E LF +PE +R +ARGIEVG IFYFGTKYS M+A Sbjct: 241 SVEECQSVLEEFTSRYARTDETHDEALFGEIPEERRRTARGIEVGQIFYFGTKYSDAMNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF +IN+K D Sbjct: 301 VVQDHSGAQVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIINLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE IY L K G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEAIYLDLVKSGLEPLYDDTDERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R TG E+M E+ + ++N+ Sbjct: 421 RRTGESEEMPPEQAVERIRQIYANH 445 >gi|126735142|ref|ZP_01750888.1| prolyl-tRNA synthetase [Roseobacter sp. CCS2] gi|126715697|gb|EBA12562.1| prolyl-tRNA synthetase [Roseobacter sp. CCS2] Length = 446 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 226/435 (51%), Positives = 311/435 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E PR+A+I SH+ ML+ GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPREAQIVSHRYMLQAGMIKQASAGIYSWLPLGFKVLRKIENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PT+QSADLW ESGRYD+YG+EMLR+ DR + M++ PT EE++TDIFR+ Sbjct: 61 QARAGHIAIQMPTIQSADLWRESGRYDAYGEEMLRIKDRGGRDMLFTPTAEELVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVNSYKDLPLTLYQIQWKFRDEVRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLKFGDRQIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + +++E++T+ YA T + H+E LFD++PE ++ +ARGIEVG IFYFGTKYS M A Sbjct: 241 DKAACQAVLEEFTSRYARTDETHDEALFDAIPEERKRTARGIEVGQIFYFGTKYSESMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+++ D Sbjct: 301 LVDDGQGGKVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGILNMRSGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +YA L+ +G + +DD E+ G++F D++G P ++ VG + + + VE+ Sbjct: 361 ADAACEALYASLTALGLEPLYDDRDERAGAKFGTMDMIGLPWRITVGPRGLKNGVVEVTC 420 Query: 421 RLTGIREDMSLEEVI 435 R TG E+M E+ + Sbjct: 421 RRTGESEEMPPEDAV 435 >gi|148555262|ref|YP_001262844.1| prolyl-tRNA synthetase [Sphingomonas wittichii RW1] gi|166980160|sp|A5V8U0|SYP_SPHWW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148500452|gb|ABQ68706.1| prolyl-tRNA synthetase [Sphingomonas wittichii RW1] Length = 437 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 238/435 (54%), Positives = 320/435 (73%), Gaps = 3/435 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLP+++E+P DA+I SHKLMLR GMI Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRHFLPVMKESPADAQIVSHKLMLRAGMIRQTAAGIYAWLPLGHRVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PT+QSADLW ESGRYD+YG EMLR+ DR+D+ M++GPT+EE++T IFR Sbjct: 61 QDRAGAIELLMPTMQSADLWRESGRYDAYGPEMLRIKDRHDREMLFGPTNEEMITAIFRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + +SYR+LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL EG++HSYN+MFV+ Sbjct: 121 NARSYRDLPRILYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDIEGARHSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL +IPM+A++GPIGGDLSHEFIVLA TGE++VF ++ + + D D Sbjct: 181 YLRTFRRMGLSAIPMQADTGPIGGDLSHEFIVLAPTGESEVFYHTNWE--VERALDVDVD 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +L V+ TA YAAT D + ++ + +RGIEVGHIFYFGTKYS M Sbjct: 239 DVAALQGFVDGLTADYAAT-DEKRDPAREAAAGDSLKQSRGIEVGHIFYFGTKYSAAMGM 297 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DG+ QMGSYGIG R++ A+IE+SHD GI+WPD+VAP+ + LIN++A D Sbjct: 298 TVQGPDGQPVTPQMGSYGIGVSRLMGAIIEASHDDAGIVWPDAVAPYTVGLINMRADDAR 357 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C A + +YA+L G + +DD E+ G++FA DL+G P Q++VG K + VE+K Sbjct: 358 CAAAADDLYAKLEAAGIETLYDDRDERGGAKFATMDLIGLPWQIVVGPKGLDKGVVELKR 417 Query: 421 RLTGIREDMSLEEVI 435 R TG + ++S+E+ I Sbjct: 418 RATGEKVELSVEDAI 432 >gi|149914370|ref|ZP_01902901.1| prolyl-tRNA synthetase [Roseobacter sp. AzwK-3b] gi|149811889|gb|EDM71722.1| prolyl-tRNA synthetase [Roseobacter sp. AzwK-3b] Length = 455 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 235/450 (52%), Positives = 316/450 (70%), Gaps = 6/450 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+IASH+LMLR GMI Q S GIYSWLP+G K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIASHRLMLRAGMIKQASAGIYSWLPMGFKVLRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R + M +PTLQ ADLW ESGRYD YG+EMLR+ DR + ++YGPT+EE++TDIFRS Sbjct: 61 QIRARHVPMLMPTLQPADLWRESGRYDDYGEEMLRIKDRQGRDLLYGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFFMKDGYNFDLTREDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRAESGPIGGD +HEF+VLA+TGE+ VF + D D+ Sbjct: 181 YLRTYERMGLQAIPMRAESGPIGGDDTHEFLVLAETGESGVFYDSEITDLRFGDREIDYT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLF-DSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + +++E++T+ YA T D H+E +F D +PE +R S RGIEVG IFYFGTKYS PM Sbjct: 241 SVEACQAVMEEFTSRYARTDDTHDESVFHDRVPEERRRSGRGIEVGQIFYFGTKYSEPMG 300 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 AT + DG V MGS+GIG R++ A+IE+SHD +GIIWP+ V PF ++N+K D Sbjct: 301 ATVQDRDGNTVPVHMGSHGIGVSRLIGAIIEASHDDRGIIWPEGVTPFHAGIVNLKTGDA 360 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE IYA L+ +G + +DD ++ G++FA DL+G P ++ VG + + + VE+ Sbjct: 361 EADAACEAIYASLTALGLEPLYDDTDDRAGAKFATMDLIGLPWRITVGPRGLKNGVVELT 420 Query: 420 HRLTGIREDMSLEEVIN-----YASHRFSN 444 R TG E++ E+ + YA+HR + Sbjct: 421 SRRTGESEELPPEQAVEKLARIYAAHRIGS 450 >gi|254463517|ref|ZP_05076933.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083] gi|206680106|gb|EDZ44593.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083] Length = 445 Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust. Identities = 231/435 (53%), Positives = 308/435 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP DA+I SH+LMLR GMI Q S GIYSWLP+G K L + I+ EE Sbjct: 1 MRLSRYFLPILKENPADAQIVSHRLMLRAGMIKQSSAGIYSWLPMGFKVLRKIENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW +SGRYD+YG EMLR+ DR+D+ M+YGPT+EE++TD+ + Sbjct: 61 QQRAGHIPMLMPTLQSADLWRKSGRYDAYGPEMLRIKDRHDREMLYGPTNEELITDMVAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP T Y +Q KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ V+ Sbjct: 121 FVGSYKSLPLTLYHVQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF + D DFD Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDYTHEFLVLADTGESEVFYDSEITDLSFGDRTIDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + S++E++T+ YA T + H E F+ LPE +R ARGIEVG IFYFGT+YS M A Sbjct: 241 DKAACQSVMEEFTSRYARTDETHEEAAFNELPEERRRVARGIEVGQIFYFGTEYSEKMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DG+ + MGS+GIG R++ A+IE+SHD GIIWP+ V PF ++N+K D Sbjct: 301 MVQNEDGQRVPLHMGSHGIGVSRLLGAIIEASHDDNGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +Y L+ +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDALYDSLTALGLDPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVEVTS 420 Query: 421 RLTGIREDMSLEEVI 435 R TG E+M+ E I Sbjct: 421 RRTGESEEMTPELAI 435 >gi|84515335|ref|ZP_01002697.1| prolyl-tRNA synthetase [Loktanella vestfoldensis SKA53] gi|84510618|gb|EAQ07073.1| prolyl-tRNA synthetase [Loktanella vestfoldensis SKA53] Length = 446 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 220/429 (51%), Positives = 302/429 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E PR+A+I SH+ ML+ GMI Q S GIYSWLPLG K L + I+ +E Sbjct: 1 MRLSRYFLPVLKETPREAQIVSHRYMLQAGMIKQASAGIYSWLPLGFKVLRKIENIVHQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PT+QSADLW ESGRYD+YG+EMLR+ DR + M++ PT EE++TDIFR+ Sbjct: 61 QERAGHIAIQMPTIQSADLWRESGRYDAYGEEMLRIKDRGGREMLFTPTAEELVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVTSYKDLPLTLYQIQWKFRDEVRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D D+ Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSQITDLKFGDRQIDYS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + ++++++T+ YA T + H+ LF+ +PE +R +ARGIEVG IFYFGTKYS M A Sbjct: 241 DHAACAAVLDEFTSRYARTDETHDAALFNQVPEERRRTARGIEVGQIFYFGTKYSDAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 LVDDGKGGKVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +Y L+ +G + +DD E+ G++F D++G P ++ VG + + + VE+ Sbjct: 361 ADAACQALYDSLTALGLEPLYDDRDERAGTKFGTMDMIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDM 429 R TG E++ Sbjct: 421 RRTGESEEL 429 >gi|695786|emb|CAA58846.1| orf5 [Zymomonas mobilis] Length = 443 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 233/436 (53%), Positives = 307/436 (70%), Gaps = 2/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+++E P DA+I SHKLMLR GMI Q + GIY+WLPLG + L IIREE Sbjct: 1 MRLSRYFLPVMKETPADAQIISHKLMLRAGMIRQTASGIYAWLPLGLRVLGRNEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA E+ +PTLQ+ADLW ESGRYD+YG EMLR DR++ ++YGPT+EE++T + R Sbjct: 61 QARAGAAELLMPTLQTADLWPESGRYDAYGPEMLRFKDRHNCELLYGPTNEEMITALIRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY L FY IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ +H+YN+MFV Sbjct: 121 NLQSYAILAGIFYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDIDETAGRHNYNRMFVG 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F RLGL++IPM+A++GPIGGDLSHEFIVLA GE VF ++ + P DFD Sbjct: 181 YLNSFSRLGLRAIPMQADTGPIGGDLSHEFIVLAPNGERHVFYHSNW-EQPTRHIEADFD 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +L SIV + YAAT D + L ++ +K +RGIEVGHIF+FGTKYS PM Sbjct: 240 DPKALQSIVNDHISDYAAT-DEKRDPLREAQAGDKLRQSRGIEVGHIFFFGTKYSKPMGF 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DGK +QMGSYGIG R++ A+IE+SHD GIIWP++VAP+ + LIN++ D+ Sbjct: 299 TLPGPDGKPIPIQMGSYGIGISRLLGAIIEASHDDNGIIWPEAVAPYHVGLINLRIDDEN 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CR + +Y RL G D +DD E+ G++FA DL+G P QV++G K +E+K+ Sbjct: 359 CRAIADSLYQRLEAAGIDTLYDDRNERGGAKFATMDLIGLPWQVVIGPKGAEKGVIELKN 418 Query: 421 RLTGIREDMSLEEVIN 436 R +G ++ +S+E+ N Sbjct: 419 RASGEKQTISVEDAFN 434 >gi|329114694|ref|ZP_08243453.1| Prolyl-tRNA synthetase [Acetobacter pomorum DM001] gi|326696174|gb|EGE47856.1| Prolyl-tRNA synthetase [Acetobacter pomorum DM001] Length = 459 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 223/440 (50%), Positives = 314/440 (71%), Gaps = 13/440 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+ENP +A+I SH+LMLR G+I Q + GIY+WLP G K L N++ I+REE Sbjct: 22 MRLSRSFLPTLKENPAEAQIVSHRLMLRAGLIRQTASGIYAWLPAGLKVLRNISQIVREE 81 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA E+ +PTLQSADLW SGRYD+YG EMLR+ DR+ + ++YGPT+EE++TD+F Sbjct: 82 QDRVGAQEVLMPTLQSADLWKRSGRYDAYGPEMLRIQDRHKRELLYGPTNEEMITDLFGQ 141 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E + +Y +M ++ Sbjct: 142 TVKSYKDLPQVLYHIQWKFRDEMRPRFGVMRGREFLMKDAYSFDLDYESAVATYRRMLLA 201 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-----SKDFMDFPIPSE 235 YLR F RLG++++PMRA++GPIGG+LSHEF++LA TGE+ VF +D++D P+ Sbjct: 202 YLRTFQRLGVRAVPMRADTGPIGGELSHEFLILAPTGESGVFYDAALEEQDWLDEPV--- 258 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D + I+L + + T PYAAT ++H+E + ++P ++ RG+EVGHIFYFG KY+ Sbjct: 259 --DTNSPIALEAFFNRVTTPYAATDEMHDEAGWQAVPAERQREGRGVEVGHIFYFGDKYT 316 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 M + G DG Y +MGSYGIG R+ A+IE+ HD GIIWPD+VAPF+ ++N+K Sbjct: 317 RSMDVSVSGPDGNQLYPEMGSYGIGVSRLAGAIIEACHDDNGIIWPDAVAPFRAVILNLK 376 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 D++C CE+IY+ + +DD E+ G +FA ADL+G P Q++VG + + K Sbjct: 377 NGDELCDAICERIYSTNEEA---FLYDDRAERAGVKFADADLMGHPWQIVVGPRGAKEGK 433 Query: 416 VEIKHRLTGIREDMSLEEVI 435 VE+K R TG R ++S+++ + Sbjct: 434 VELKRRATGERHEVSVDDAL 453 >gi|258542706|ref|YP_003188139.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256633784|dbj|BAH99759.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256636843|dbj|BAI02812.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03] gi|256639896|dbj|BAI05858.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07] gi|256642952|dbj|BAI08907.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22] gi|256646007|dbj|BAI11955.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26] gi|256649060|dbj|BAI15001.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32] gi|256652047|dbj|BAI17981.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655104|dbj|BAI21031.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12] Length = 438 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 222/440 (50%), Positives = 314/440 (71%), Gaps = 13/440 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+ENP +A+I SH+LMLR G+I Q + GIY+WLP G K L N++ I+REE Sbjct: 1 MRLSRSFLPTLKENPAEAQIVSHRLMLRAGLIRQTASGIYAWLPAGLKVLRNISQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA E+ +PTLQSADLW SGRYD+YG EMLR+ DR+ + ++YGPT+EE++TD+F Sbjct: 61 QDRVGAQEVLMPTLQSADLWKRSGRYDAYGPEMLRIQDRHKRELLYGPTNEEMITDLFGQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E + +Y +M ++ Sbjct: 121 TVKSYKDLPQVLYHIQWKFRDEMRPRFGVMRGREFLMKDAYSFDLDYESAVATYRRMLLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-----SKDFMDFPIPSE 235 YLR F RLG++++PMRA++GPIGG+LSHEF++LA TGE+ VF +D++D P+ Sbjct: 181 YLRTFQRLGVRAVPMRADTGPIGGELSHEFLILAPTGESGVFYDAALEEQDWLDEPV--- 237 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D + ++L + + T PYAAT ++H+E + ++P ++ RG+EVGHIFYFG KY+ Sbjct: 238 --DTNSPVALEAFFNRVTTPYAATDEMHDEAGWQAVPAERQREGRGVEVGHIFYFGDKYT 295 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 M + G DG Y +MGSYGIG R+ A+IE+ HD GIIWPD+VAPF+ ++N+K Sbjct: 296 RSMDVSVSGPDGNQLYPEMGSYGIGVSRLAGAIIEACHDDNGIIWPDAVAPFRAVILNLK 355 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 D++C CE+IY+ + +DD E+ G +FA ADL+G P Q++VG + + K Sbjct: 356 NGDELCDAICERIYSTNEEA---FLYDDRAERAGVKFADADLMGHPWQIVVGPRGAKEGK 412 Query: 416 VEIKHRLTGIREDMSLEEVI 435 VE+K R TG R ++S+++ + Sbjct: 413 VELKRRATGERHEVSVDDAL 432 >gi|148259950|ref|YP_001234077.1| prolyl-tRNA synthetase [Acidiphilium cryptum JF-5] gi|326403096|ref|YP_004283177.1| prolyl-tRNA synthetase [Acidiphilium multivorum AIU301] gi|166980092|sp|A5FX26|SYP_ACICJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146401631|gb|ABQ30158.1| prolyl-tRNA synthetase [Acidiphilium cryptum JF-5] gi|325049957|dbj|BAJ80295.1| prolyl-tRNA synthetase [Acidiphilium multivorum AIU301] Length = 437 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 222/435 (51%), Positives = 308/435 (70%), Gaps = 3/435 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +A+I SH+LMLR G+I Q S GIY+WLP G + L N+ I+REE Sbjct: 1 MRLSRSLIPTLKETPAEAQIVSHRLMLRAGLIRQQSAGIYAWLPAGLRVLHNIANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G+ E+ +PT+QSA+LW ESGRYD+YG EMLR+ DR+D+ M+YGPT+EE++T I R Sbjct: 61 QARAGSQEILMPTIQSAELWRESGRYDAYGPEMLRIRDRHDREMLYGPTNEEMLTAIMRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR+LP YQIQ KFRDE+RPRFGV+R REF MKD YSFDL EG+ SY +M ++ Sbjct: 121 SVQSYRDLPQMLYQIQWKFRDEVRPRFGVLRGREFYMKDGYSFDLDYEGAVESYRRMMLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+R F R+G++++PMRA++GPIGG+LSHEF +LA TGE+ VF F + + D++ Sbjct: 181 YMRTFKRMGVRAVPMRADTGPIGGNLSHEFHILAPTGESGVFYDSSFETIELGDDAYDYE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L++ ++ T+ YAAT + H+E + +PE++R RGIEVG IFYFGTKYS M+ Sbjct: 241 ARADLDAFFDRMTSLYAATDEKHDEAAWAKVPEDRRREGRGIEVGQIFYFGTKYSQAMNF 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG + +MGSYGIG R+ A+IE+SHD GIIWPD++APF+ S++N++ DQV Sbjct: 301 TVVGPDGARLHPEMGSYGIGVSRLTGAIIEASHDEAGIIWPDAIAPFRASILNLRQGDQV 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CE+IY +G D +DD + G +FA ADL+G P QVIVG + + +VE+KH Sbjct: 361 TDALCERIY---DALGRDALYDDREARAGEKFADADLMGHPWQVIVGPRGAAKGQVELKH 417 Query: 421 RLTGIREDMSLEEVI 435 R TG R ++ +E + Sbjct: 418 RRTGERAELDIESAL 432 >gi|162139874|ref|YP_745105.2| prolyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] gi|148887022|sp|Q0BSM0|SYP_GRABC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 440 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 226/435 (51%), Positives = 308/435 (70%), Gaps = 2/435 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +A+IASH+LMLR G+I Q + GIY+WLP G + L+ + I+R+E Sbjct: 1 MRLSRALIPTLKETPAEAQIASHRLMLRAGLIQQEAAGIYAWLPAGLRVLNAIANIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q GA E+ +PT+QSADLW ESGRYD+YG EMLRL DR+++ ++YGPT+EEV+TDI+R Sbjct: 61 QAGIGAQEVLMPTIQSADLWRESGRYDAYGPEMLRLKDRHERDLLYGPTNEEVITDIYRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFGVMR REFLMKD YSFDL G+ SY ++ +S Sbjct: 121 SVKSYRELPQMAYQIQWKFRDEIRPRFGVMRGREFLMKDGYSFDLDYAGAVRSYRRIMLS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+R F RLG+K+IPM A++GPIGGDLSHEFI+LA TGE++VF F + + + D Sbjct: 181 YMRTFQRLGVKAIPMLADTGPIGGDLSHEFIILAPTGESEVFYDAAFEEIDWSGASFNVD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + T YAAT + H+ +++LPE +R + RGIEVGHIFYFGTKYS ++ Sbjct: 241 SDADLERFFQTITGHYAATDEKHDTAAYEALPEARRRTGRGIEVGHIFYFGTKYSKALNM 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG+ + +MGSYGIG R+VAAVIE+SHD GIIWPDS+APF+ +++N+K D Sbjct: 301 TVAGRDGQKLHPEMGSYGIGVSRMVAAVIEASHDEAGIIWPDSIAPFRAAVLNLKNGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C E +Y R+ +DD E+ G +FA ADL+G P QV++G + + +VE+K Sbjct: 361 CDAMAEDVYRRIGV--RHALYDDRDERAGVKFADADLMGHPWQVVIGPRGAAAGRVELKR 418 Query: 421 RLTGIREDMSLEEVI 435 R TG R ++++E+ + Sbjct: 419 RRTGERVELTVEDAL 433 >gi|89053551|ref|YP_509002.1| prolyl-tRNA synthetase [Jannaschia sp. CCS1] gi|114152201|sp|Q28TI5|SYP_JANSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|88863100|gb|ABD53977.1| prolyl-tRNA synthetase [Jannaschia sp. CCS1] Length = 452 Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust. Identities = 223/448 (49%), Positives = 315/448 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+LMLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIVSHRLMLRAGMIKQASAGIYSWLPLGYKVLKRIERIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW +SGR+D+YG EMLRL DR+D+ M+YGPT+EE++TD+ + Sbjct: 61 QIRAGHIPMLMPTLQSADLWQKSGRFDAYGPEMLRLKDRHDRDMLYGPTNEEMITDMVGT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 FVTSYKSLPLTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEAALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF + D D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDYTHEFLVLADTGESEVFYDAEITDLKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +++++++T+ YA T + H+E F ++P +++ SARGIEVG IFYFGT+YS + A Sbjct: 241 DVAQCDAVLQEFTSRYARTDETHDEAEFAAIPGDRQRSARGIEVGQIFYFGTEYSEKLGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ + MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 HVQNDEGERVPLHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE + L G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEALETALENAGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNRPV 448 R TG E+++ + + + ++ ++PV Sbjct: 421 RRTGESEELTPDAAVARVAEVYAAHKPV 448 >gi|144899844|emb|CAM76708.1| prolyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 429 Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust. Identities = 229/435 (52%), Positives = 308/435 (70%), Gaps = 11/435 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLP L+E P +A+IASH+LMLR GMI Q + GIY+WLPLG K L + I+REE Sbjct: 1 MRLSRFFLPTLKETPSEAQIASHRLMLRAGMIRQSASGIYTWLPLGWKVLQKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PT+QSAD+W ESGRYD+YGKEMLR+ DR+D+ M++GPT+EE++T IFR Sbjct: 61 QDAAGAQELLMPTIQSADIWRESGRYDAYGKEMLRIVDRHDREMLFGPTNEELITQIFRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYR LP Y IQ KFRDE+RPRFGVMR REFLMKD+YSFD+ +G+K SY MF + Sbjct: 121 NVKSYRELPKILYHIQWKFRDEVRPRFGVMRGREFLMKDSYSFDIDFDGAKRSYEAMFNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL +IPM A+SG IGG+L+HEF VLA+TGE+ VF + + E Sbjct: 181 YLRTFKRMGLTAIPMVADSGAIGGNLTHEFHVLAETGESGVF-------YDVAYEELAAK 233 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + L ++ + YA T + H+ + P ++ ARGIEVGHIFYFGTKYS M A Sbjct: 234 DAVDLEAL----SKLYAVTDEKHDPNSPECPPADRLKVARGIEVGHIFYFGTKYSKAMGA 289 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG +V+MGSYGIG R+V A+IE+ HD +GI WP++VAPFK+ LIN+KA D Sbjct: 290 VVAGPDGNPVHVEMGSYGIGVSRLVGAIIEAYHDDRGIKWPEAVAPFKVGLINLKAGDGA 349 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y LS+ G +V +DD ++ G +FA DL+G P Q++ G K V+ VE+K+ Sbjct: 350 CDRVCEDMYRALSEQGVEVLYDDRDDRAGVKFADMDLIGLPWQLVAGPKGVAAGLVELKN 409 Query: 421 RLTGIREDMSLEEVI 435 R TG ++++S+E + Sbjct: 410 RHTGEKQELSVEAAL 424 >gi|209545456|ref|YP_002277685.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209533133|gb|ACI53070.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 438 Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust. Identities = 227/435 (52%), Positives = 308/435 (70%), Gaps = 3/435 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+ENP +A++ SH+LMLR G+I Q + GIY+WLP G + L N+ I+REE Sbjct: 1 MRLSRGFLPTLKENPAEAQVISHRLMLRAGLIRQTAAGIYAWLPAGWRVLQNIARIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PT+QSA+LW SGRYD+YG EMLR+ DR+++ ++YGPT+EE++TD+F Sbjct: 61 QDAIGAQELLMPTVQSAELWKRSGRYDAYGPEMLRIQDRHERELLYGPTNEEMITDLFGQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL + SY +M ++ Sbjct: 121 VVKSYRELPQVLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDYASAVDSYRRMMLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG+++IPM A++GPIGG+LSHEF++LA TGE+ VF F + S+ D D Sbjct: 181 YLRTFQRLGVRAIPMVADTGPIGGELSHEFLILAPTGESGVFFDGAFEEQDWLSDPVDID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D SL++ + T+ YAAT + H+E + +P +R RGIEVGHIF+FG KY+ M Sbjct: 241 DRESLDAFFTRMTSFYAATDEKHDEAAWADVPAERRREGRGIEVGHIFHFGRKYTESMDI 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG Y +MGSYGIG R+VAA+IE+SHD GIIWPDSVAPF+ +++N+K D Sbjct: 301 TVSGPDGAPLYPEMGSYGIGVSRLVAAIIEASHDDNGIIWPDSVAPFRAAILNLKTGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE++YA + +DD GE+ G +FA ADL+G P QVIVG + + KVE+K Sbjct: 361 CDAICEQVYAAAPE---SFLYDDRGERAGVKFADADLMGHPWQVIVGPRGAKEGKVELKR 417 Query: 421 RLTGIREDMSLEEVI 435 R G R ++S+++ + Sbjct: 418 RADGARFELSVDDAL 432 >gi|114316122|gb|ABI62182.1| prolyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] Length = 499 Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust. Identities = 226/435 (51%), Positives = 308/435 (70%), Gaps = 2/435 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +A+IASH+LMLR G+I Q + GIY+WLP G + L+ + I+R+E Sbjct: 60 MRLSRALIPTLKETPAEAQIASHRLMLRAGLIQQEAAGIYAWLPAGLRVLNAIANIVRDE 119 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q GA E+ +PT+QSADLW ESGRYD+YG EMLRL DR+++ ++YGPT+EEV+TDI+R Sbjct: 120 QAGIGAQEVLMPTIQSADLWRESGRYDAYGPEMLRLKDRHERDLLYGPTNEEVITDIYRH 179 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFGVMR REFLMKD YSFDL G+ SY ++ +S Sbjct: 180 SVKSYRELPQMAYQIQWKFRDEIRPRFGVMRGREFLMKDGYSFDLDYAGAVRSYRRIMLS 239 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+R F RLG+K+IPM A++GPIGGDLSHEFI+LA TGE++VF F + + + D Sbjct: 240 YMRTFQRLGVKAIPMLADTGPIGGDLSHEFIILAPTGESEVFYDAAFEEIDWSGASFNVD 299 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + T YAAT + H+ +++LPE +R + RGIEVGHIFYFGTKYS ++ Sbjct: 300 SDADLERFFQTITGHYAATDEKHDTAAYEALPEARRRTGRGIEVGHIFYFGTKYSKALNM 359 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG+ + +MGSYGIG R+VAAVIE+SHD GIIWPDS+APF+ +++N+K D Sbjct: 360 TVAGRDGQKLHPEMGSYGIGVSRMVAAVIEASHDEAGIIWPDSIAPFRAAVLNLKNGDAA 419 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C E +Y R+ +DD E+ G +FA ADL+G P QV++G + + +VE+K Sbjct: 420 CDAMAEDVYRRIGVR--HALYDDRDERAGVKFADADLMGHPWQVVIGPRGAAAGRVELKR 477 Query: 421 RLTGIREDMSLEEVI 435 R TG R ++++E+ + Sbjct: 478 RRTGERVELTVEDAL 492 >gi|162148795|ref|YP_001603256.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161787372|emb|CAP56967.1| Prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 476 Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust. Identities = 227/435 (52%), Positives = 308/435 (70%), Gaps = 3/435 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+ENP +A++ SH+LMLR G+I Q + GIY+WLP G + L N+ I+REE Sbjct: 39 MRLSRGFLPTLKENPAEAQVISHRLMLRAGLIRQTAAGIYAWLPAGWRVLQNIARIVREE 98 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PT+QSA+LW SGRYD+YG EMLR+ DR+++ ++YGPT+EE++TD+F Sbjct: 99 QDAIGAQELLMPTVQSAELWKRSGRYDAYGPEMLRIQDRHERELLYGPTNEEMITDLFGQ 158 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL + SY +M ++ Sbjct: 159 VVKSYRELPQVLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDYASAVDSYRRMMLA 218 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG+++IPM A++GPIGG+LSHEF++LA TGE+ VF F + S+ D D Sbjct: 219 YLRTFQRLGVRAIPMVADTGPIGGELSHEFLILAPTGESGVFFDGAFEEQDWLSDPVDID 278 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D SL++ + T+ YAAT + H+E + +P +R RGIEVGHIF+FG KY+ M Sbjct: 279 DRESLDAFFTRMTSFYAATDEKHDEAAWADVPAERRREGRGIEVGHIFHFGRKYTESMDI 338 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG Y +MGSYGIG R+VAA+IE+SHD GIIWPDSVAPF+ +++N+K D Sbjct: 339 TVSGPDGAPLYPEMGSYGIGVSRLVAAIIEASHDDNGIIWPDSVAPFRAAILNLKTGDAA 398 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE++YA + +DD GE+ G +FA ADL+G P QVIVG + + KVE+K Sbjct: 399 CDAICEQVYAAAPE---SFLYDDRGERAGVKFADADLMGHPWQVIVGPRGAKEGKVELKR 455 Query: 421 RLTGIREDMSLEEVI 435 R G R ++S+++ + Sbjct: 456 RADGARFELSVDDAL 470 >gi|209964526|ref|YP_002297441.1| prolyl-tRNA synthetase [Rhodospirillum centenum SW] gi|209957992|gb|ACI98628.1| prolyl-tRNA synthetase ProS [Rhodospirillum centenum SW] Length = 404 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 223/405 (55%), Positives = 301/405 (74%), Gaps = 6/405 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI Q S GIY+WLPLG + L V I+REEQ+R GA EM +PT+QSADLW +SGRY++YG Sbjct: 1 MIRQTSAGIYAWLPLGWRVLQKVAQIVREEQDRAGAQEMLMPTIQSADLWKQSGRYEAYG 60 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM 150 KEMLR+ DR+D+ M+YGPT+EE++TDIF++ +KSY++LP Y IQ KFRDE+RPRFG+M Sbjct: 61 KEMLRITDRHDREMLYGPTNEEMITDIFKTFVKSYKDLPKNLYHIQWKFRDEIRPRFGLM 120 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R REFLMKD YSFDL EG+K SY +MF++YLR F R+G+K+IPMRA++GPIGGDLSHEF Sbjct: 121 RGREFLMKDNYSFDLDVEGAKLSYRRMFLAYLRTFARMGIKAIPMRADTGPIGGDLSHEF 180 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 I+LA+TGE+QVFC + +++ + +E D L +++T+ YAAT ++H+ Sbjct: 181 IILAETGESQVFCDRRWLELDVLAEAPAPDS--DLKEFFDRYTSIYAATEEMHDAA---K 235 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 P + V+ARGIEVGHIFYFG KYS PM A G DG+ V+MGSYGIG RVVAA+IE Sbjct: 236 APAD-LVTARGIEVGHIFYFGKKYSQPMEAIVAGPDGQPVTVEMGSYGIGVSRVVAAIIE 294 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +SHD +GIIWP+ VAPFK++++N+K D C CE +YARLS +V +DD E+ G+ Sbjct: 295 ASHDEQGIIWPEPVAPFKLAIVNLKVDDAECSRVCEDLYARLSGAKVEVLYDDRNERPGA 354 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +FA DL+G P Q+ VG + + VE+K R TG + ++S+E+ + Sbjct: 355 KFADMDLIGVPWQLTVGPRGLKAGVVELKRRATGEKFELSVEDAL 399 >gi|330994071|ref|ZP_08318001.1| Prolyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] gi|329759017|gb|EGG75531.1| Prolyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] Length = 440 Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust. Identities = 225/435 (51%), Positives = 303/435 (69%), Gaps = 3/435 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+ENP +A+I SH+LMLR GMI Q + GIY+WLP G + L N+ I+R E Sbjct: 1 MRLSRSFLPTLKENPTEAQITSHRLMLRAGMIRQTAAGIYAWLPTGLRVLRNIANIVRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PT+QSA+LW SGRYD+YG EMLR+ DR+++ M++GPT+EE++TD+F Sbjct: 61 QDAIGAQELLMPTMQSAELWKRSGRYDAYGPEMLRIQDRHERDMLFGPTNEEMVTDLFGQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR REF MKDAYSFDL + +Y +M +S Sbjct: 121 AIKSYKELPQVLYQIQWKFRDEVRPRFGVMRGREFYMKDAYSFDLDHAAAVDTYRRMMLS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG+++IPMRA++GPIGG+LSHEF++LA TGE+ VF + E D + Sbjct: 181 YLRTFQRLGVRAIPMRADTGPIGGELSHEFLILAPTGESGVFFDSALEEQDWVGETIDVN 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +L + T+ YAAT ++H+E + +P +R RGIEVGHIF FG KY+ M Sbjct: 241 DRDALGAFFTSLTSFYAATDEMHDEAAWAKVPAERRREGRGIEVGHIFNFGRKYTQSMDI 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + +MGSYGIG R+VAA+IE+SHD GIIWP+SVAPF+ +IN+K D Sbjct: 301 AVSGPDGAPLHPEMGSYGIGVSRLVAAIIEASHDENGIIWPESVAPFRAVIINLKNGDAQ 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CEK+YA D+ +DD E+ G++FA ADLLG P Q+IVG + + KVE+K+ Sbjct: 361 CDAICEKLYAAAPD---DLLYDDRAERAGAKFADADLLGHPWQLIVGPRGAKEGKVEVKN 417 Query: 421 RLTGIREDMSLEEVI 435 R TG R + +++ + Sbjct: 418 RRTGERTEETVDAAL 432 >gi|254453587|ref|ZP_05067024.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 238] gi|198267993|gb|EDY92263.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 238] Length = 428 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 214/410 (52%), Positives = 288/410 (70%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI Q S GIYSWLPLG K L + I+ EEQ R G I + +PT+QSADLW ESGR Sbjct: 1 MLRAGMIKQSSAGIYSWLPLGFKVLKRIEQIVHEEQERAGHIAIQMPTIQSADLWRESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 Y++YG EMLR+ DRN +++ PT EE++TDIFRSH+ SY++LP T YQIQ KFRDE RP Sbjct: 61 YEAYGDEMLRIKDRNGNDLLFTPTAEELVTDIFRSHVASYKSLPMTLYQIQWKFRDERRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMR REF MKD Y+FDLT E + H+YN+ VSYLR + R+GL++IPMRA SGPIGGD Sbjct: 121 RFGVMRGREFYMKDGYTFDLTKEDAMHAYNRHLVSYLRTYERMGLQAIPMRAASGPIGGD 180 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 +HEF+VLADTGE++VF + + D+DD+ ++E++T YA T + H+ Sbjct: 181 DTHEFLVLADTGESEVFYDAAVTELSFGNREIDYDDVAQCADVMEEFTTKYARTDETHDP 240 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 LFD++P +++ +ARGIEVG IFYFGTKYS M AT +G DGK V MGS+GIG R++ Sbjct: 241 ALFDAIPADRQRTARGIEVGQIFYFGTKYSDAMGATVQGPDGKPTAVHMGSHGIGVSRLL 300 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A+IE+SHD KGIIWP+ V PF + ++N+K D AC+ +Y ++ +G + +DD Sbjct: 301 GAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDADADAACQSLYDAVAALGLEALYDDRD 360 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+ GS+F D++G P ++ VG + + + VE+ R TG E+M E+ I Sbjct: 361 ERAGSKFGTMDMIGLPWRITVGPRGLKNGVVELTSRKTGESEEMPPEQAI 410 >gi|58038568|ref|YP_190532.1| prolyl-tRNA synthetase [Gluconobacter oxydans 621H] gi|81819190|sp|Q5FUU9|SYP_GLUOX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|58000982|gb|AAW59876.1| Prolyl-tRNA synthetase [Gluconobacter oxydans 621H] Length = 438 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 224/435 (51%), Positives = 303/435 (69%), Gaps = 3/435 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K F P L+E P +A+IASH+LMLR G++ Q + GIY+WLP G + L N+ IIREE Sbjct: 1 MRLTKAFQPTLKEVPAEAQIASHRLMLRAGLVRQTASGIYAWLPAGLRVLRNIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PTLQSA+LW SGRYD+YG EMLR+ DR+ + ++YGPT+EE++TDIF S Sbjct: 61 QDAIGAQEVLMPTLQSAELWRRSGRYDAYGPEMLRIQDRHGRDLLYGPTNEEMITDIFGS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD + EG+ SY +M +S Sbjct: 121 SVKSYKELPKALYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDASYEGAVASYRRMMLS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLRIF RLG++++PM A++GPIGGDLSHEF+VLA TGE+ VF + S D D Sbjct: 181 YLRIFQRLGVRAVPMVADTGPIGGDLSHEFLVLAPTGESAVFFDAALEEQDWLSRPVDCD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D SL + T YAAT + H+E + +P ++ RGIEVGHIFYFGTKY+ M Sbjct: 241 DAESLATFFATVTDHYAATDEKHDEAEWAKVPAERKREGRGIEVGHIFYFGTKYTASMGI 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + MGSYG+G R+V A+IE+SHD GIIWP SVAP++ +++N++ D+ Sbjct: 301 EVSGPDGAPFHPHMGSYGVGVSRLVGAIIEASHDDAGIIWPASVAPYRAAILNLRQDDEA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C C++IY + ++ +DD E+ G +F ADL+G P Q+IVG + + KVE+K Sbjct: 361 CDAICDRIYGTDPE---NLLYDDRSERAGVKFNDADLMGHPWQIIVGPRGAKEGKVELKQ 417 Query: 421 RLTGIREDMSLEEVI 435 R TG R ++S+E+ + Sbjct: 418 RATGERFELSVEDAL 432 >gi|262277283|ref|ZP_06055076.1| prolyl-tRNA synthetase [alpha proteobacterium HIMB114] gi|262224386|gb|EEY74845.1| prolyl-tRNA synthetase [alpha proteobacterium HIMB114] Length = 442 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 223/438 (50%), Positives = 306/438 (69%), Gaps = 8/438 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S YFLPIL+ENP +A+I SH+LMLR GMI Q + GIYSWLP+G K L N+ I+REE Sbjct: 1 MKLSNYFLPILKENPSEAKIKSHQLMLRAGMIRQSASGIYSWLPMGFKVLKNIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QN+ GAIE+ +PT+QSAD+W ESGRYD YGKEMLR++DR+++ ++YGPT+EE++T IFR Sbjct: 61 QNKAGAIELLMPTIQSADIWKESGRYDDYGKEMLRISDRHERDLLYGPTNEELITQIFRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+NLP Y IQ KFRDE+RPRFGVMR REFLMKD YSFD+ ++ SY KMF+S Sbjct: 121 NIKSYKNLPLMLYHIQWKFRDEIRPRFGVMRCREFLMKDTYSFDVDKATAEFSYKKMFLS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+ F + L +IPM+AE+GPIGGDLSHEFI+LADTGE++VF K+ +D I D+ Sbjct: 181 YLKTFQKFELNAIPMKAETGPIGGDLSHEFIILADTGESEVFLDKNLLD--IDVNEVDYS 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + ++N I+E+++ Y+AT + H+ F+ ++ + ++ +GIE+GHIFYFG KYS M Sbjct: 239 E-KNINEIIERFSKFYSATDEKHDVNEFENNVSKENQLRTKGIEIGHIFYFGDKYSKSMK 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A +GK+ QMGSYGIG R+ AA+IE+ ++G + WP +V PFK+++IN+ + Sbjct: 298 ALVNNKEGKNINPQMGSYGIGVSRLPAAIIEAKYNGTFMKWPKTVTPFKVAIINLGKNGD 357 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +IY L D DD E S+F DL+G P Q+I+GSK D E + Sbjct: 358 EADQKSNEIYQNLINANLDPILDDTSENPSSKFKNFDLIGIPYQIIIGSKLKKD---EFE 414 Query: 420 HRLTGIRE-DMSLEEVIN 436 + G + +S EEVIN Sbjct: 415 FKEIGEEKLILSKEEVIN 432 >gi|296116519|ref|ZP_06835129.1| prolyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295976731|gb|EFG83499.1| prolyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 439 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 224/436 (51%), Positives = 301/436 (69%), Gaps = 3/436 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+ENP +A+I SH+LMLR G+I Q S GIY+WLP G K L N+ I+R E Sbjct: 1 MRLSRSFLPTLKENPAEAQITSHRLMLRAGLIRQTSAGIYAWLPAGLKVLRNIANIVRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA EM +PTLQS++LW SGRYD+YG EMLR+ DR+++ ++YGPT+EE++TD+F Sbjct: 61 QDAIGAQEMLMPTLQSSELWKRSGRYDAYGPEMLRIRDRHERDLLYGPTNEEMVTDLFGQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP Y +Q KFRDE+RPRFGVMR REF MKDAYSFD + + SY +M ++ Sbjct: 121 VVKSYRELPQVLYHVQWKFRDEVRPRFGVMRGREFYMKDAYSFDADYDAAVDSYRRMMLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG+K+IPM A++GPIGG+LSHEF+VLA TGE+ VF F + SE D Sbjct: 181 YLRTFQRLGVKAIPMVADTGPIGGELSHEFLVLAPTGESGVFFDGAFEEQDWLSEEVDIA 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D SL + T+ YAAT + H+E + +P +R RGIEVGHIF+FG KY+ M Sbjct: 241 DRASLAKFFARMTSFYAATDEKHDEAQWAKVPVERRREGRGIEVGHIFHFGRKYTESMDI 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG + +MGSYGIG R+VAA+IE+SHD +GIIWP++VAPF +IN+K D Sbjct: 301 SVSGPDGAPLFPEMGSYGIGVSRLVAAIIEASHDEQGIIWPETVAPFGAVIINLKNGDAQ 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + CE++YA + +DD E+ G +FA ADL+G P QVIVG + VE+K+ Sbjct: 361 CDEICERLYAAAPD---RLLYDDRPERAGVKFADADLMGHPWQVIVGPRGAKAGVVELKN 417 Query: 421 RLTGIREDMSLEEVIN 436 R +G R ++ ++ V+ Sbjct: 418 RASGERSELPIDAVLT 433 >gi|330814001|ref|YP_004358240.1| prolyl-tRNA synthetase Bacterial type [Candidatus Pelagibacter sp. IMCC9063] gi|327487096|gb|AEA81501.1| prolyl-tRNA synthetase Bacterial type [Candidatus Pelagibacter sp. IMCC9063] Length = 441 Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust. Identities = 226/439 (51%), Positives = 308/439 (70%), Gaps = 9/439 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S +FLPIL++ P DA I SH+LMLR+GMI Q + GIYSWLPLG K L + +I+R+E Sbjct: 1 MKLSNFFLPILRDVPSDATIKSHQLMLRSGMIRQSASGIYSWLPLGFKVLKKIESIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QN+ GA EM +PT+QSADLW ESGRYD YG EMLR+ DR D+ ++YGPT+EE++T IFR Sbjct: 61 QNKAGAQEMLMPTIQSADLWKESGRYDGYGLEMLRIRDRQDRELLYGPTNEELITQIFRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++K+Y++LP Y IQ KFRDE+RPRFG+MR REFLMKD+YSFD EG+ SYNKMF + Sbjct: 121 NVKTYKSLPLILYHIQWKFRDEIRPRFGIMRCREFLMKDSYSFDENKEGAIISYNKMFCA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 YL+ F RLGL++IPM A++GPIGGDLSHEFI+LADTGE+Q+F SK +D I +DF Sbjct: 181 YLKTFERLGLRAIPMAADTGPIGGDLSHEFIILADTGESQIFTSKKILDLKI----SDFK 236 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK-RVSARGIEVGHIFYFGTKYSLPM 298 +D SL +V+ +T Y+AT + N+ FD E K ++ RGIEVGHIFYFG KYS PM Sbjct: 237 NDSESLAKMVKSYTDIYSATDEKFNQSDFDKSVEKKDQLVTRGIEVGHIFYFGDKYSKPM 296 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 A ++GK+ ++MGSYGIG R+ A+IE+++ + WP SV PF +++I + K + Sbjct: 297 KALVNSSEGKNITIEMGSYGIGVSRLAGAIIEANYKDNVMKWPASVTPFHVAVIYLGKKN 356 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D+ + +Y +L +V DD E S+F DL+G P Q+I+G+K D + E Sbjct: 357 DETLKKKTSDVYEKLLNNSFEVLLDDTDESPASKFKNFDLIGIPYQIIIGAKQSGD-EFE 415 Query: 418 IKHRLTGIREDMSLEEVIN 436 K L +E ++L+ +IN Sbjct: 416 FKE-LGEEKEIINLDIIIN 433 >gi|67458992|ref|YP_246616.1| prolyl-tRNA synthetase [Rickettsia felis URRWXCal2] gi|75536572|sp|Q4ULX2|SYP_RICFE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|67004525|gb|AAY61451.1| Prolyl-tRNA synthetase [Rickettsia felis URRWXCal2] Length = 427 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 218/439 (49%), Positives = 308/439 (70%), Gaps = 16/439 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIENIVRSN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ +K F +N + D Sbjct: 181 YINTFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYNKRFKTL---KDNPNID 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPM 298 VE+ + YAA + H+ + LP E + S++GIEVGHIFY G+KYS+ M Sbjct: 238 --------VEEIKSWYAAAEEKHD---VNKLPISEQEITSSKGIEVGHIFYIGSKYSVNM 286 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A GK V+M SYGIG R+VAA+IE++ + KGIIWP +VAPFK+SLIN+ HD Sbjct: 287 NALINDEHGKLTPVEMSSYGIGISRLVAAIIEANCNEKGIIWPSNVAPFKVSLINLNIHD 346 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + K+Y LS +V +DD + GS+FA DL+G P Q+I+G K +D VE+ Sbjct: 347 SKCVELAAKVYKELSAQNIEVLYDDTEARAGSKFATHDLIGSPYQIIIGPKKAADDIVEL 406 Query: 419 KHRLTGIREDMSLEEVINY 437 K+R G+ ED+ +E +I+Y Sbjct: 407 KNRKIGVIEDIEVENLIHY 425 >gi|51473574|ref|YP_067331.1| prolyl-tRNA synthetase [Rickettsia typhi str. Wilmington] gi|81826313|sp|Q68WZ3|SYP_RICTY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|51459886|gb|AAU03849.1| Proline translase [Rickettsia typhi str. Wilmington] Length = 428 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 221/437 (50%), Positives = 304/437 (69%), Gaps = 12/437 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLPIL+E P +A++ SHKLMLR+GMI + + G+Y+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPILKEEPSEAQVISHKLMLRSGMIMKQASGLYTWLPLGLKVLKNIENIVRSN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR++ YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKVGALEVLMPCIQPAHLWIESGRFEYYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + ++YNKM+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINQENAVNTYNKMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ K F I +N D D Sbjct: 181 YINTFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDK---RFKILKDNPDID 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 VE+ + YAA + H+ S PE S++GIEVGHIFY G+KYS+ M+A Sbjct: 238 --------VEEIKSWYAAAEEKHDVNKLSSFPEG-ITSSKGIEVGHIFYIGSKYSVNMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK V+M SYGIG R+ AA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 289 LINDEYGKLIPVEMSSYGIGISRLAAAIIEANCDKKGIIWPFSVAPFKVSLINLNIHDNK 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + K LS +V +DD + GS+FA DL+G P QVI+G K +++ VE+K Sbjct: 349 CVELAAKTDKELSNKNIEVLYDDTEARPGSKFATHDLIGSPYQVIIGPKKAANNIVELKD 408 Query: 421 RLTGIREDMSLEEVINY 437 R TG+ ED+ +E +INY Sbjct: 409 RKTGVLEDIEIENLINY 425 >gi|239947222|ref|ZP_04698975.1| prolyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] gi|241068545|ref|XP_002408465.1| tRNA synthetases class II, putative [Ixodes scapularis] gi|215492453|gb|EEC02094.1| tRNA synthetases class II, putative [Ixodes scapularis] gi|239921498|gb|EER21522.1| prolyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] Length = 426 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 217/433 (50%), Positives = 303/433 (69%), Gaps = 16/433 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLM R+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQVTSHKLMFRSGMIRQQAAGIYTWLPLGLKLLKNIENIVRLN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ K F +N+D D Sbjct: 181 YINTFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKRFKTL---KDNSDID 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPM 298 VE+ + YAA + H+ + LP E + S++GIEVGHIFY G+KYS+ M Sbjct: 238 --------VEEIKSWYAAAEEKHD---VNKLPISEQEITSSKGIEVGHIFYIGSKYSVNM 286 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A GK V+M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 287 NALINDEHGKLTPVEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHD 346 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + K Y LS +V +DD + GS+FA DL+G P Q+I+G K +D+ VE+ Sbjct: 347 SKCVELAAKAYKELSAQNIEVLYDDTEARAGSKFATHDLIGSPYQIIIGPKKAADNIVEL 406 Query: 419 KHRLTGIREDMSL 431 K+R +G+ ED+ + Sbjct: 407 KNRKSGVIEDIEI 419 >gi|58698845|ref|ZP_00373719.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|225630527|ref|YP_002727318.1| prolyl-tRNA synthetase [Wolbachia sp. wRi] gi|254782927|sp|C0R3N5|SYP_WOLWR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|58534643|gb|EAL58768.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|225592508|gb|ACN95527.1| prolyl-tRNA synthetase [Wolbachia sp. wRi] Length = 422 Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust. Identities = 226/441 (51%), Positives = 306/441 (69%), Gaps = 19/441 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY+LP L+E P A+I SH+ LR G+I Q + GIYSWLPLG L N+ IIR+E Sbjct: 1 MRLSKYYLPTLKEKPAHAKIISHQYSLRAGLIKQIASGIYSWLPLGLLVLKNIEDIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GAIE+ +P +Q A+LW ESGRYD YGKEMLR+ DR+++ M++GPTHEEV TD+ R Sbjct: 61 MDKSGAIEVLMPCVQPANLWRESGRYDDYGKEMLRIKDRHEEDMLFGPTHEEVATDLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPR+GVMR REFLMKDAYSFD+ EG+ +SYN M+ + Sbjct: 121 VVKSYKDLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF R+GL I +RA++GPIGG+LSHEF +LA+TGE+ ++ F SE + + Sbjct: 181 YIKIFKRMGLTPIGVRADTGPIGGNLSHEFHILANTGESTLYYDNKF------SELLESE 234 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ SL SI YA D+H+ + E VS +GIE+GHIFYFG KYS PM A Sbjct: 235 DVESLKSI-------YAVADDMHDPETCPISQEQLNVS-KGIEIGHIFYFGDKYSKPMKA 286 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DGK+ + MGSYGIG R+V A+IE+ HD KGIIWP+SVAPF+I LIN++ Sbjct: 287 SVTSQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGIIWPESVAPFRIGLINLQTK--- 343 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +A +KIY L +V +DD +G +F+ DL+G P Q+IVG K + + VE+K+ Sbjct: 344 VTEAADKIYKALK--SDEVLYDDTEGSVGVKFSRMDLIGLPWQIIVGKKAIDEKIVEVKN 401 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG ++M +EE IN+ S + Sbjct: 402 RATGEVKEMQIEEAINHFSTK 422 >gi|15604249|ref|NP_220765.1| prolyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E] gi|6226191|sp|Q9ZDE7|SYP_RICPR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|3860941|emb|CAA14841.1| PROLYL-TRNA SYNTHETASE (proS) [Rickettsia prowazekii] gi|292571991|gb|ADE29906.1| Prolyl-tRNA synthetase [Rickettsia prowazekii Rp22] Length = 432 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 217/437 (49%), Positives = 302/437 (69%), Gaps = 12/437 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLPIL+E P +A++ SHKLMLR+GMI + + G+Y+WLPLG K L N+ ++R Sbjct: 1 MLLSKYFLPILKEEPSEAKVISHKLMLRSGMIMKQAAGLYTWLPLGLKVLKNIENVVRSN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR++ YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKVGALEVLMPCIQPAHLWIESGRFEHYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ + + ++YNKM+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINQKNAVNTYNKMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ K F I +N D D Sbjct: 181 YMNTFRDLGVFAIPVIADNGPIGGNLSHEFHIVAETGESTIYYDK---RFKILKDNPDID 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 VE+ YAA + H+ S PE ++GIEVGHIFY G+KYS+ M+A Sbjct: 238 --------VEEIKGWYAAAEEKHDVNKLSSFPEG-ITRSKGIEVGHIFYIGSKYSVNMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK V+M SYGIG R+ AA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 289 LINDEYGKLIPVEMSSYGIGISRLAAAIIEANCDKKGIIWPCSVAPFKVSLINLNIHDNK 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + K LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE+K Sbjct: 349 CVELAAKTDKELSHQNIEVLYDDTDARPGSKFATHDLIGSPYQIIIGPKKAANNIVELKD 408 Query: 421 RLTGIREDMSLEEVINY 437 R TG+ ED+ +E +INY Sbjct: 409 RKTGVLEDIEVENIINY 425 >gi|157803870|ref|YP_001492419.1| prolyl-tRNA synthetase [Rickettsia canadensis str. McKiel] gi|166980151|sp|A8EZ51|SYP_RICCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157785133|gb|ABV73634.1| prolyl-tRNA synthetase [Rickettsia canadensis str. McKiel] Length = 438 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 218/433 (50%), Positives = 305/433 (70%), Gaps = 16/433 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A+I SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQITSHKLMLRSGMIRQQAAGIYTWLPLGLKILKNIENIVRSN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+++YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFENYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+MF + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMFKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LS+EF ++A+TGE+ ++ K F F +N D D Sbjct: 181 YINTFRDLGVFAIPVIADNGPIGGNLSNEFHIIAETGESTLYYDKRFKIF---KDNPDID 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPM 298 VE+ + YAA+ + H+ + LP E + S++GIEVGHIFY G+KYS+ M Sbjct: 238 --------VEEIKSWYAASEEKHD---VNKLPISEQEITSSKGIEVGHIFYIGSKYSVNM 286 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A GK V+M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 287 NALINDEHGKLTPVEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHD 346 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + E+ Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE Sbjct: 347 SKCTELAERAYKELSAQNIEVLYDDTDVRPGSKFATHDLIGSPYQIIIGPKKAANNIVEF 406 Query: 419 KHRLTGIREDMSL 431 K+R +G+ ED+ + Sbjct: 407 KNRKSGVIEDIKI 419 >gi|190570494|ref|YP_001974852.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019252|ref|ZP_03335059.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356766|emb|CAQ54125.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995361|gb|EEB56002.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 419 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 228/443 (51%), Positives = 305/443 (68%), Gaps = 26/443 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y+LP L+E P AEI SH+ +LR G+I Q + GIYSWLPLG L N+ IIR+E Sbjct: 1 MRLSQYYLPTLKETPAGAEIISHQYLLRAGLIKQTASGIYSWLPLGLLVLKNIENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GAIE+ +P +Q A LW ESGRYD YGKEMLR+ DR++ M++GPTHEEV+TD+ R+ Sbjct: 61 ---IGAIEVLMPCVQPASLWRESGRYDDYGKEMLRIKDRHESDMLFGPTHEEVVTDLIRN 117 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPR+GVMR REFLMKDAYSFD+ EG+ +SYN M+ + Sbjct: 118 TVKSYKDLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKT 177 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF R+GL I +RA++GPIGG+LSHEF +LA+TGE+ ++ + + + Sbjct: 178 YIKIFKRMGLTPIGVRADTGPIGGNLSHEFHILANTGESTLYYDNKLFEL------LESE 231 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 DI SL SI YA D+H+ + E VS +GIE+GHIFYFG KYS PM A Sbjct: 232 DIESLKSI-------YAVADDMHDPESCPITQEQLNVS-KGIEIGHIFYFGDKYSKPMKA 283 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DGK+ + MGSYGIG R+V A+IE+ HD KGIIWP++VAPFK+ LIN++ Sbjct: 284 SVTSQDGKNVNMHMGSYGIGVSRLVGAIIEAFHDDKGIIWPEAVAPFKVGLINLQTK--- 340 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +A +KIY L +V +DD E +G +FA DL+G P Q+I+G K VS++ VE+K+ Sbjct: 341 VTEAADKIYKALK--SDEVLYDDTDESVGVKFARMDLIGLPWQIIIGKKAVSENIVEVKN 398 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG E++ +EE IN RFS Sbjct: 399 RATGEVEEIQVEEAIN----RFS 417 >gi|91205619|ref|YP_537974.1| prolyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|157827332|ref|YP_001496396.1| prolyl-tRNA synthetase [Rickettsia bellii OSU 85-389] gi|114152245|sp|Q1RIC9|SYP_RICBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980150|sp|A8GU77|SYP_RICB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91069163|gb|ABE04885.1| Prolyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|157802636|gb|ABV79359.1| prolyl-tRNA synthetase [Rickettsia bellii OSU 85-389] Length = 432 Score = 448 bits (1152), Expect = e-124, Method: Compositional matrix adjust. Identities = 214/433 (49%), Positives = 301/433 (69%), Gaps = 13/433 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E+P +A+I SHKLMLR+GMI Q + GIYSWLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEDPSEAQITSHKLMLRSGMIRQQAAGIYSWLPLGLKVLKNIENIVRSN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G +E+ +P +Q A LWVESGR+D+YGKEML+ DR+D +++GPT+E+++TDIFR+ Sbjct: 61 MDKAGCLEVLMPCIQPAHLWVESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMVTDIFRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDIDEESAVKTYNQMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ ++P+ A++GPIGG LSHEF ++A+TGE+ ++ K F +N D D Sbjct: 181 YINTFRDLGVFAVPVIADNGPIGGKLSHEFHIIAETGESNIYYDKRFKTL---KDNPDID 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +E+ + YAA + H+ S + + S++GIEVGHIFY GTKYS+ M+A Sbjct: 238 --------IEEIKSWYAAAEEKHDASKLSS--DKEITSSKGIEVGHIFYIGTKYSVNMNA 287 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK ++M SYGIG R+VAA+IE++ D KGIIWP +VAPFKISLIN+ HD Sbjct: 288 LINDEHGKLTPIEMSSYGIGISRLVAAIIEANSDAKGIIWPIAVAPFKISLINLNIHDSK 347 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + E++Y L +V +DD + GS+FA DL+G P Q+I+G K +++ VE+K+ Sbjct: 348 CLELAERVYNELLAQNIEVLYDDTDVRAGSKFATHDLIGSPYQIIIGPKKAANNIVELKN 407 Query: 421 RLTGIREDMSLEE 433 R G ED+ L + Sbjct: 408 RKNGEIEDIDLNK 420 >gi|58584338|ref|YP_197911.1| prolyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|81311670|sp|Q5GTK5|SYP_WOLTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|58418654|gb|AAW70669.1| Prolyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 425 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 219/437 (50%), Positives = 299/437 (68%), Gaps = 16/437 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y+LP L+E P A I SH+ LR G+I Q + GIY+WLPLG + L N+ IIR+E Sbjct: 1 MRLSQYYLPTLKEKPAHARIISHQYSLRAGLIKQIASGIYTWLPLGLRVLKNIEGIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE +P +Q A LW ESGRYD YGK MLR+ DR+++ M++GPTHEEV TD+ R Sbjct: 61 MNKSGAIEALMPCVQPASLWRESGRYDDYGKTMLRIRDRHEEDMLFGPTHEEVATDLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+NLP YQIQ KFRDE+RPR+GVMR REFLMKDAYSF++ E + +SYN M+ + Sbjct: 121 IVKSYKNLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFNVNYESALNSYNLMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF R+GL I +RA++G IGG+LSHEF +LA TGE+ ++ F + + + Sbjct: 181 YIKIFKRMGLIPIGVRADTGLIGGNLSHEFHILASTGESTLYYDNKFFEL------LESE 234 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ SL SI YA D+H+ K +P+ + ++GIE+GHIFYFG KYS PM+A Sbjct: 235 DVKSLKSI-------YAVADDIHDPKTC-PVPQEQLNVSKGIEIGHIFYFGDKYSKPMNA 286 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 DGK+ + MGSYGIG R+V A+IE+ HD KGI WP++VAPF++ LIN++ Sbjct: 287 KVTAQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGITWPEAVAPFRVGLINLQTKTAE 346 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + KIY+ L +V +DD IG +FA DL+G P Q+IVG K VS++ +EIK+ Sbjct: 347 YVEIANKIYSTLK--SDEVLYDDTEGSIGVKFAKMDLIGLPWQIIVGKKAVSENIIEIKN 404 Query: 421 RLTGIREDMSLEEVINY 437 R TG E++ +EE INY Sbjct: 405 RATGKVEEVQIEEAINY 421 >gi|225631202|ref|ZP_03787900.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591110|gb|EEH12294.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 422 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 224/441 (50%), Positives = 303/441 (68%), Gaps = 19/441 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY+LP L+E P A+I SH+ LR G+I Q + GIY+WLPLG L N+ IIR+E Sbjct: 1 MRLSKYYLPTLKEKPAHAKIISHQYSLRAGLIKQIASGIYTWLPLGLLVLKNIEDIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE +P +Q A LW ESGRYD YGKEMLR+ DR+++ M++GPTHEE+ TD+ R Sbjct: 61 MNKSGAIEALMPCVQPASLWRESGRYDDYGKEMLRIKDRHEEDMLFGPTHEEIATDLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPR+GVMR REFLMKDAYSFD+ EG+ +SYN M+ + Sbjct: 121 VVKSYKDLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF R+G I +RA++GPIGG+LSHEF +LA+TGE+ ++ F SE + + Sbjct: 181 YIKIFKRMGFTPIGVRADTGPIGGNLSHEFHILANTGESTLYYDNKF------SELLESE 234 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 DI SL SI YA D+H+ + E VS +GIE+GHIFYFG KYS PM A Sbjct: 235 DIESLKSI-------YAVADDMHDPETCPISQEQLNVS-KGIEIGHIFYFGDKYSKPMKA 286 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DGK+ + MGSYGIG R+V A+IE+ HD KGIIWP+SVAPF+I LIN++ Sbjct: 287 SVTSQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGIIWPESVAPFRIGLINLQPK--- 343 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +A +KIY L +V +DD +G +F+ DL+G P Q+IVG K + + VE+K+ Sbjct: 344 VTEAADKIYKALK--SDEVLYDDTEGSVGVKFSRMDLIGLPWQIIVGKKAIDEKIVEVKN 401 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG ++M +EE +N+ S + Sbjct: 402 RATGEVKEMPIEEAVNHFSTK 422 >gi|42520651|ref|NP_966566.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] gi|81831258|sp|Q73GW6|SYP_WOLPM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|42410390|gb|AAS14500.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 422 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 225/441 (51%), Positives = 303/441 (68%), Gaps = 19/441 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY+LP L+E P A+I SH+ LR G+I Q + GIY+WLPLG L N+ IIR+E Sbjct: 1 MRLSKYYLPTLKEKPAHAKIISHQYSLRAGLIKQIASGIYTWLPLGLLVLKNIEDIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE +P +Q A LW ESGRYD YGKEMLR+ DR+++ M++GPTHEE+ TD+ R Sbjct: 61 MNKSGAIEALMPCVQPASLWRESGRYDDYGKEMLRIKDRHEEDMLFGPTHEEIATDLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPR+GVMR REFLMKDAYSFD+ EG+ +SYN M+ + Sbjct: 121 VVKSYKDLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF R+G I + A++GPIGG+LSHEF +LA+TGE+ ++ F SE + + Sbjct: 181 YIKIFKRMGFTPIGVGADTGPIGGNLSHEFHILANTGESTLYYDNKF------SELLESE 234 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 DI SL SI YA D+H+ + E VS +GIE+GHIFYFG KYS PM A Sbjct: 235 DIESLKSI-------YAVADDMHDPETCPISQEQLNVS-KGIEIGHIFYFGDKYSKPMKA 286 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DGK+ + MGSYGIG R+V A+IE+ HD KGIIWP+ VAPF+I LIN++ Sbjct: 287 SVTSQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGIIWPEEVAPFRIGLINLQTK--- 343 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +A +KIY L +V +DD +G +F+ DL+G P Q+IVG K VS++ VE+K+ Sbjct: 344 VTEAADKIYKALK--SDEVLYDDTEGSVGVKFSRMDLIGLPWQIIVGKKAVSENIVEVKN 401 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG ++M +EE IN+ S + Sbjct: 402 RATGEVKEMQIEEAINHFSAK 422 >gi|157964462|ref|YP_001499286.1| prolyl-tRNA synthetase [Rickettsia massiliae MTU5] gi|157844238|gb|ABV84739.1| Prolyl-tRNA synthetase [Rickettsia massiliae MTU5] Length = 437 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 215/433 (49%), Positives = 300/433 (69%), Gaps = 16/433 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 10 MLLSKYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIENIVRLN 69 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++ PT+E+++TDIFR Sbjct: 70 MNKAGALEILMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFSPTNEDMITDIFRH 129 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 130 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYKA 189 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ K F +N D D Sbjct: 190 YINAFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKKFKTL---KDNPDID 246 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPM 298 VE+ + YAA + H + LP E + S++GIEVGHIFY G+KYS+ M Sbjct: 247 --------VEEIKSWYAAAEEKHE---VNKLPISEQEITSSKGIEVGHIFYIGSKYSVNM 295 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A GK ++M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 296 NALINDEHGKLTPIEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHD 355 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + E Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE+ Sbjct: 356 SKCVELAEMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVEL 415 Query: 419 KHRLTGIREDMSL 431 K R +G+ ED+ + Sbjct: 416 KDRKSGVIEDIEV 428 >gi|157828402|ref|YP_001494644.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933112|ref|YP_001649901.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] gi|166980152|sp|A8GRW1|SYP_RICRS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189083508|sp|B0BXB9|SYP_RICRO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157800883|gb|ABV76136.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908199|gb|ABY72495.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] Length = 426 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 216/433 (49%), Positives = 302/433 (69%), Gaps = 16/433 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIENIVRLN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ K F I +N D D Sbjct: 181 YINAFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDK---KFKILKDNPDID 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPM 298 VE+ + YAA + + + LP E + S++GIEVGHIFY G+KYS+ M Sbjct: 238 --------VEEIKSWYAAAEEKYE---VNKLPISEQEITSSKGIEVGHIFYIGSKYSVNM 286 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A GK ++M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 287 NALINDEYGKLTPIEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHD 346 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + E Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE+ Sbjct: 347 SKCVELAEMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVEL 406 Query: 419 KHRLTGIREDMSL 431 K R +G+ ED+ + Sbjct: 407 KDRKSGVIEDIEV 419 >gi|157825653|ref|YP_001493373.1| prolyl-tRNA synthetase [Rickettsia akari str. Hartford] gi|166980149|sp|A8GN90|SYP_RICAH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157799611|gb|ABV74865.1| prolyl-tRNA synthetase [Rickettsia akari str. Hartford] Length = 427 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 217/439 (49%), Positives = 303/439 (69%), Gaps = 16/439 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M S+YFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+ Sbjct: 1 MLLSQYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIENIVSLN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+++YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFNNYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG LSHEF ++A+TGE+ ++ K F +N D D Sbjct: 181 YINTFRDLGVFAIPVIADNGPIGGKLSHEFHIIAETGESTIYYDKRFKTL---KDNPDID 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPM 298 V++ + YAA + H+ + LP E + S++GIEVGHIFY G+KYS+ M Sbjct: 238 --------VDEIKSWYAAAEEKHD---INKLPISEQEITSSKGIEVGHIFYIGSKYSVNM 286 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A GK V+M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 287 KALINDEHGKLAPVEMSSYGIGISRLVAAIIEANCDEKGIIWPFSVAPFKVSLINLNIHD 346 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + K Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE+ Sbjct: 347 SKCVELAAKAYKDLSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVEL 406 Query: 419 KHRLTGIREDMSLEEVINY 437 K R +G ED+ +E +INY Sbjct: 407 KDRKSGNIEDIEVENLINY 425 >gi|15892451|ref|NP_360165.1| prolyl-tRNA synthetase [Rickettsia conorii str. Malish 7] gi|229586653|ref|YP_002845154.1| prolyl-tRNA synthetase [Rickettsia africae ESF-5] gi|81854111|sp|Q92I92|SYP_RICCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|259511616|sp|C3PNA1|SYP_RICAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|15619605|gb|AAL03066.1| prolyl-tRNA synthetase [Rickettsia conorii str. Malish 7] gi|228021703|gb|ACP53411.1| Prolyl-tRNA synthetase [Rickettsia africae ESF-5] Length = 426 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 215/433 (49%), Positives = 300/433 (69%), Gaps = 16/433 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIENIVRLN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ IP+ A++GPIGG+LSHEF ++A+TGE+ ++ K F +N D D Sbjct: 181 YINAFRDLGVFVIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKKFKTL---KDNPDID 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPM 298 VE+ + YAA + + + LP E + S++GIEVGHIFY G+KYS+ M Sbjct: 238 --------VEEIKSWYAAAEEKYE---VNKLPISEQEITSSKGIEVGHIFYIGSKYSVNM 286 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A GK ++M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 287 NALINDEYGKLTPIEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHD 346 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + E Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE+ Sbjct: 347 SKCVELAEMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVEL 406 Query: 419 KHRLTGIREDMSL 431 K R +G+ ED+ + Sbjct: 407 KDRKSGVIEDIEV 419 >gi|238650930|ref|YP_002916786.1| prolyl-tRNA synthetase [Rickettsia peacockii str. Rustic] gi|259511617|sp|C4K2D7|SYP_RICPU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|238625028|gb|ACR47734.1| prolyl-tRNA synthetase [Rickettsia peacockii str. Rustic] Length = 426 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 214/433 (49%), Positives = 300/433 (69%), Gaps = 16/433 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIENIVRLN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ K F +N D D Sbjct: 181 YINAFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKKFKTL---KDNPDID 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPM 298 VE+ + YAA + + + LP E + S++GIEVGHIFY G+KYS+ M Sbjct: 238 --------VEEIKSWYAAAEEKYE---VNKLPISEQEITSSKGIEVGHIFYIGSKYSVNM 286 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A GK ++M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 287 NALINDEYGKLTPIEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHD 346 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + E Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ V + Sbjct: 347 SKCVELAEMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVAL 406 Query: 419 KHRLTGIREDMSL 431 K R +G+ ED+ + Sbjct: 407 KDRKSGVIEDIEV 419 >gi|34580554|ref|ZP_00142034.1| prolyl-tRNA synthetase [Rickettsia sibirica 246] gi|28261939|gb|EAA25443.1| prolyl-tRNA synthetase [Rickettsia sibirica 246] Length = 426 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 215/433 (49%), Positives = 300/433 (69%), Gaps = 16/433 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIEHIVRLN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++GPT+E+++ DIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMIMDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ IP+ A++GPIGG+LSHEF V+A+TGE+ ++ K F I +N D D Sbjct: 181 YINAFRDLGVFVIPVIADNGPIGGNLSHEFHVIAETGESTIYYDK---KFKILKDNPDID 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPM 298 VE+ + YAA + + + LP E + S++GIEVGHIFY G+KYS+ M Sbjct: 238 --------VEEIKSWYAAAEEKYE---VNKLPISEQEITSSKGIEVGHIFYIGSKYSVNM 286 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A GK ++M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 287 NALINDEYGKLTPIEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHD 346 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + + Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE+ Sbjct: 347 SKCVELADMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVEL 406 Query: 419 KHRLTGIREDMSL 431 K R +G+ ED+ + Sbjct: 407 KDRKSGVIEDIEV 419 >gi|148284536|ref|YP_001248626.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] gi|146739975|emb|CAM80015.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] Length = 433 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 214/438 (48%), Positives = 297/438 (67%), Gaps = 15/438 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E+P AEI SHKLMLR GMI Q GIY+WLPLG K L N+ I+R+ Sbjct: 1 MRLSQYFLPLLKEDPAGAEIISHKLMLRAGMIKQACAGIYNWLPLGIKVLQNIQDIVRKN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N E+ +P +Q A LW ES RY++YGKEML++ DR+D +++GPT+EE++TDIFRS Sbjct: 61 MNAAQCTELLMPCIQPASLWKESSRYNAYGKEMLKIKDRHDNDLLFGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY++LP FY IQ KFRDE+RPRFGVMRSREF+MKDAYSFD+ + SYN M+++ Sbjct: 121 CIQSYKDLPKNFYHIQWKFRDEIRPRFGVMRSREFIMKDAYSFDIDQTSAIQSYNLMYLT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 YL+IF LGLK IP++A++G IGG LSHEF ++ TG+++++ S F F D+ Sbjct: 181 YLKIFKDLGLKVIPVQADNGAIGGKLSHEFHIITATGDSKIYYDSTKFNPF-------DY 233 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA-RGIEVGHIFYFGTKYSLPM 298 + +SLN + EQ Y T D H K + + N ++S GIEVGHIFYFGTKYS M Sbjct: 234 NQDLSLNKL-EQL---YIVTEDKH--KTYQNQISNDKISTISGIEVGHIFYFGTKYSELM 287 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + +GK V+MGSYGIG R++ A+IE++HD GIIWP +VAPFK+S+IN+ ++ Sbjct: 288 KACIQMQNGKLTAVEMGSYGIGISRLIGAIIEANHDQYGIIWPQNVAPFKVSVINLLPNN 347 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C+ ++Y L++ D DD G + AV DL+G P Q+I+G F+ S +E Sbjct: 348 DKCKQTSNQLYQILTQQKTDALLDDTSSSAGHKLAVHDLIGIPYQIIIGKNFIETSTIEF 407 Query: 419 KHRLTGIREDMSLEEVIN 436 K+R + +S++ +IN Sbjct: 408 KYRHNHQLQKLSIDALIN 425 >gi|189182913|ref|YP_001936698.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] gi|189179684|dbj|BAG39464.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] Length = 433 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 210/437 (48%), Positives = 294/437 (67%), Gaps = 13/437 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E+P AEI SHKLMLR GMI Q GIY+WLPLG K L N+ I+R+ Sbjct: 1 MRLSQYFLPLLKEDPAGAEIISHKLMLRAGMIKQACAGIYNWLPLGIKVLQNIQDIVRKN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N IE+ +P +Q A LW ES RY++YGKEML++ DR+D +++GPT+EE++TDIFRS Sbjct: 61 MNAAQCIELLMPCIQPASLWKESSRYNAYGKEMLKIKDRHDNDLLFGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY++LP FY IQ KFRDE+RPRFGVMRSREF+MKDAYSFD+ + SYN M+++ Sbjct: 121 SIQSYKDLPKNFYHIQWKFRDEIRPRFGVMRSREFIMKDAYSFDIDQASAIQSYNLMYLT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 YL+IF LGLK IP++A++G IGG LSHEF ++ TG+++++ S F F D+ Sbjct: 181 YLKIFKDLGLKVIPVQADNGAIGGKLSHEFHIITATGDSKIYYDSTKFNPF-------DY 233 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + +SLN + EQ Y T D H + + + + GIEVGHIFYFGTKYS M Sbjct: 234 NQDLSLNKL-EQL---YIVTEDKHKTDQ-NQISNDTISTISGIEVGHIFYFGTKYSELMK 288 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A + +GK V+MGSYGIG R++ A+IE++HD GIIWP +VAPFK+S+IN+ ++ Sbjct: 289 ACIQLQNGKLTAVEMGSYGIGISRLIGAIIEANHDEYGIIWPQNVAPFKVSVINLLPNND 348 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 C+ ++Y L++ D DD G + A DL+G P Q+I+G F+ + +E K Sbjct: 349 KCKQTSNQLYQILTQQKTDALLDDTSSSAGHKLAAHDLIGIPYQIIIGKNFIETATIEFK 408 Query: 420 HRLTGIREDMSLEEVIN 436 +R + +S++ +IN Sbjct: 409 YRHNQQLQKLSIDALIN 425 >gi|254455357|ref|ZP_05068786.1| prolyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207082359|gb|EDZ59785.1| prolyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 444 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 215/449 (47%), Positives = 301/449 (67%), Gaps = 9/449 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F+PIL+ NP +A+I SH+LMLR GMI Q S GIYSWLPLG K + + I+REE Sbjct: 1 MLLSKSFIPILKNNPSEAKIKSHQLMLRVGMIKQASAGIYSWLPLGFKVMKKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q++ GA E+ +PT+QS+++W ESGRYD YG+EMLR+ DR ++ M+YGPT+EE +T+IFRS Sbjct: 61 QDKIGAQEILMPTIQSSEIWKESGRYDDYGEEMLRIKDRQNREMLYGPTNEEQVTEIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE+RPRFG+MR REF MKDAYSFD+T E + SYNK F+S Sbjct: 121 SLKSYKSLPQLLYHIQWKFRDEIRPRFGIMRGREFYMKDAYSFDITDEDAFFSYNKFFLS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RL L +IPM A++GPIGG+LSHEFI+LADTGE+++F K D + +++T+ + Sbjct: 181 YLRTFKRLSLTAIPMAADTGPIGGNLSHEFIILADTGESKIFTDKRIFD--LTNDDTELE 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL-PENKRVSARGIEVGHIFYFGTKYSLPMS 299 SL + +++ Y+ T + N+ F+ + E R+ +GIEVGHIFYFG KYS M Sbjct: 239 K-SSLEQMRKRYEKFYSVTDEKFNKVEFEKMVSEENRLITKGIEVGHIFYFGDKYSKAMD 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII--WPDSVAPFKISLIN-IKA 356 GK +V+MGSYGIG R+V A+IE+ +D + I WP SVAP+ I+LI I Sbjct: 298 TAVDLPGGKKDFVKMGSYGIGVSRLVGAIIEAKYDDENEIMKWPLSVAPYDIALIPMINK 357 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +D + KI + L + + DD E S+ +L+G P Q+I+G K SD + Sbjct: 358 NDNSALEKANKINSELIRNNIEAIIDDTDENYSSKIKKMNLIGAPYQIIIGKK--SDGDL 415 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 G +++SLE++I + + ++N Sbjct: 416 LEFKEPGGETQNLSLEKIIEIITKQKASN 444 >gi|71083600|ref|YP_266319.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062] gi|114152227|sp|Q4FM73|SYP_PELUB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71062713|gb|AAZ21716.1| proline-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062] Length = 444 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 213/424 (50%), Positives = 284/424 (66%), Gaps = 8/424 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F+PIL+ NP +A+I SH+LMLR GMI Q S GIYSWLPLG K + + I+REE Sbjct: 1 MYISKSFIPILKNNPSEAKIKSHQLMLRVGMIKQSSAGIYSWLPLGFKVMKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QN+ GA E+ +PT+Q +D+W ESGRYD YG EMLR+ DR + M+YGPT+EE++TDIFRS Sbjct: 61 QNKIGAQEILMPTIQPSDIWKESGRYDDYGDEMLRIKDRQGREMLYGPTNEELVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE+RPRFG+MR REF MKDAYSFD+ E + SYNK F S Sbjct: 121 SVKSYKSLPQLLYHIQWKFRDEVRPRFGIMRGREFYMKDAYSFDVNDEDATFSYNKFFFS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+ F RL L +IPM A++GPIGG+LSHEFI+LADTGE+++F K D + SE T D Sbjct: 181 YLKTFKRLELSAIPMAADTGPIGGNLSHEFIILADTGESKIFTDKRVFD--LGSEGTVLD 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLF-DSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 SL + +++ YA + N+ F + + E R+ +GIEVGHIFYFG KYS ++ Sbjct: 239 R-QSLQDLRKKYEQYYAVADEKFNKNEFEEKVSEENRLITKGIEVGHIFYFGDKYSKALN 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII--WPDSVAPFKISLIN-IKA 356 A GK +V+MGSYGIG R+V A+IE+ +D K I WP SVAP+++++I I Sbjct: 298 AAVDLPGGKKDFVKMGSYGIGVSRLVGAIIEAKYDQKDEIMKWPFSVAPYELAIIPMINK 357 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +D D K++ D DDM E + S+ +L+G P Q+I+G K D+ + Sbjct: 358 NDTSALDKANKLFKHFESKNIDTIIDDMDENLSSKIKKFNLIGVPYQIILG-KNSEDNLL 416 Query: 417 EIKH 420 E K Sbjct: 417 EFKE 420 >gi|58617074|ref|YP_196273.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] gi|81311371|sp|Q5FHL5|SYP_EHRRG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|58416686|emb|CAI27799.1| Prolyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] Length = 426 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 202/436 (46%), Positives = 287/436 (65%), Gaps = 15/436 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY++P L+E P D + SH LR+G+I Q + GIY+WLPLG K L N+ +I+EE Sbjct: 1 MRLSKYYIPTLKETPTDVSVTSHVYSLRSGLIRQVASGIYAWLPLGLKVLKNIENVIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++G +E+ +P +Q A LW ESGRY+ YG EMLR+ DRN++ M++GPTHEEV+TD+ R+ Sbjct: 61 MNKSGILEVLMPLIQPASLWQESGRYNDYGSEMLRIKDRNNREMVFGPTHEEVVTDLLRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+NLP YQ+Q KFRDELRPR+G+MR REFLMKDAYSFD + SYN MF Sbjct: 121 TLTSYKNLPLILYQVQWKFRDELRPRYGIMRCREFLMKDAYSFDKDFNSAIESYNLMFKV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF RLGL I ++A+SGPIGG+LSHEF +LA++GE+ ++ + + Sbjct: 181 YIQIFRRLGLTPIAVKADSGPIGGNLSHEFHILANSGESTLYY-----------DQDIIN 229 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I + N +E+ Y A D+HN + +P + +++GIE+GHIFY G KYS M+A Sbjct: 230 LINNDNIDIEKIKNTYTAADDLHNSETC-PIPASNIKTSKGIEIGHIFYLGDKYSKTMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F + + + MG YGIG R+V A+IE SHD GIIWP+ +APFK SL+N+ + ++ Sbjct: 289 AF-SQNNETQLLHMGCYGIGVSRLVGAIIEVSHDNNGIIWPEEIAPFKFSLVNVFSANKE 347 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CR+ E +YA+L DV +DD + G +F+ DLLG P QVI+G + +E++ Sbjct: 348 CRNISENLYAKLD--SNDVLYDDTEDSTGIKFSRMDLLGMPWQVIIGKTTIEHGLIEVRQ 405 Query: 421 RLTGIREDMSLEEVIN 436 R + MS E+ +N Sbjct: 406 RSSKKSLLMSTEQFLN 421 >gi|91761979|ref|ZP_01263944.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] gi|91717781|gb|EAS84431.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] Length = 444 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 213/424 (50%), Positives = 283/424 (66%), Gaps = 8/424 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F+PIL+ NP +A+I SH+LMLR GMI Q S GIYSWLPLG K + + I+REE Sbjct: 1 MYISKSFIPILKNNPSEAKIKSHQLMLRVGMIKQSSAGIYSWLPLGFKVMKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QN GA E+ +PT+Q +D+W ESGRYD YG EMLR+ DR + M+YGPT+EE++TDIFRS Sbjct: 61 QNTIGAQEILMPTIQPSDIWKESGRYDDYGDEMLRIKDRQGREMLYGPTNEELVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE+RPRFG+MR REF MKDAYSFD+ E + SYNK F S Sbjct: 121 SVKSYKSLPQLLYHIQWKFRDEVRPRFGIMRGREFYMKDAYSFDVNDEDATFSYNKFFFS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+ F RL L +IPM A++GPIGG+LSHEFI+LADTGE+++F K D + SE T D Sbjct: 181 YLKTFKRLELSAIPMAADTGPIGGNLSHEFIILADTGESKIFTDKRVFD--LGSEGTVLD 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLF-DSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 SL + +++ YA + N+ F + + E R+ +GIEVGHIFYFG KYS ++ Sbjct: 239 R-QSLQDLRKKYEQYYAVADEKFNKNEFEEKVSEENRLITKGIEVGHIFYFGDKYSKALN 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII--WPDSVAPFKISLIN-IKA 356 A GK +V+MGSYGIG R+V A+IE+ +D K I WP SVAP+++++I I Sbjct: 298 AAVDLPGGKKDFVKMGSYGIGVSRLVGAIIEAKYDQKDEIMKWPFSVAPYELAIIPMINK 357 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +D D K++ D DDM E + S+ +L+G P Q+I+G K D+ + Sbjct: 358 NDTSALDKANKLFKHFESKNIDTIIDDMDENLSSKIKKFNLIGVPYQIILG-KNSEDNLL 416 Query: 417 EIKH 420 E K Sbjct: 417 EFKE 420 >gi|73666953|ref|YP_302969.1| prolyl-tRNA synthetase [Ehrlichia canis str. Jake] gi|114152194|sp|Q3YSD4|SYP_EHRCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|72394094|gb|AAZ68371.1| Prolyl-tRNA synthetase [Ehrlichia canis str. Jake] Length = 424 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 203/436 (46%), Positives = 287/436 (65%), Gaps = 18/436 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y++P L+E D + SHK +R G+I Q + GIY+WLPLG + L N+ I+REE Sbjct: 1 MRLSNYYIPTLKETSADVSVVSHKYSIRAGLIKQIASGIYTWLPLGLRVLRNIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA+E+ +P +Q A LW ESGRYD YG EMLR+ DRN + M++GPTHEEV+TD R+ Sbjct: 61 MNKSGALEVLMPLIQPASLWKESGRYDDYGSEMLRITDRNQREMLFGPTHEEVITDTLRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + S++NLP T YQIQ KFRDELRPR+G+MR REFLMKDAYSFD G+ SYN MF + Sbjct: 121 TLTSHKNLPITLYQIQWKFRDELRPRYGIMRCREFLMKDAYSFDKDLSGAILSYNLMFKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF LGL I ++AESGPIGG+LSHEF VLA++GE+ ++ ++ ++ + S+N D Sbjct: 181 YIKIFKNLGLTPIAVKAESGPIGGNLSHEFHVLANSGESTLYYDQEIIEL-MNSDNID-- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +E+ Y A D+H+ + +P N +++GIE+GHIFY G KYS PM+A Sbjct: 238 --------IERIKNTYTAADDMHDPQTC-PIPPNNIKTSKGIEIGHIFYLGDKYSKPMNA 288 Query: 301 TFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 F D D +QMG YGIG R+VAA+IE HD KGI WP+ ++PFK SL+N+ + + Sbjct: 289 NF--CDNNDSKPLQMGCYGIGISRLVAAIIEVFHDNKGITWPEEISPFKFSLVNLYSSND 346 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 C E ++ +L DV +DD + G + DLLG P Q+I+G V +E++ Sbjct: 347 KCIKVAENLHMQLHN---DVLYDDTDDSPGIKLTRTDLLGMPWQIIIGKSTVEQDLIEVR 403 Query: 420 HRLTGIREDMSLEEVI 435 +R + +S+E+ + Sbjct: 404 NRSNKDKFLISVEQFL 419 >gi|57239072|ref|YP_180208.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58579015|ref|YP_197227.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|81819260|sp|Q5HBI6|SYP_EHRRW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|57161151|emb|CAH58064.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58417641|emb|CAI26845.1| Prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 426 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 202/436 (46%), Positives = 285/436 (65%), Gaps = 15/436 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY++P L+E P D + SH LR+G+I Q + GIY+WLPLG K L N+ +I+EE Sbjct: 1 MRLSKYYIPTLKETPADVSVTSHVYSLRSGLIRQVASGIYAWLPLGLKVLKNIENVIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++G +E+ +P +Q A LW ESGRY+ YG EMLR+ DRN++ M++GPTHEEV+TD+ R+ Sbjct: 61 MNKSGILEVLMPLIQPASLWQESGRYNDYGSEMLRIKDRNNREMVFGPTHEEVVTDLLRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+NLP YQ+Q KFRDELRPR+G+MR REFLMKDAYSFD + SYN MF Sbjct: 121 TLTSYKNLPLILYQVQWKFRDELRPRYGIMRCREFLMKDAYSFDKDFNSAIESYNLMFKV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF RLGL I ++A+SGPIGG+LSHEF +LA++GE+ ++ + + Sbjct: 181 YIQIFRRLGLTPIAVKADSGPIGGNLSHEFHILANSGESTLYY-----------DQDIIN 229 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I + N +E+ Y A D+HN + +P + ++GIE+GHIFY G KYS M+A Sbjct: 230 LINNDNIDIEKIKNTYTAADDLHNSETC-PIPASNIKKSKGIEIGHIFYLGDKYSKTMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F + + + MG YGIG R+V A+IE SHD GIIWP+ +APFK SL+N+ + ++ Sbjct: 289 VF-SQNNETQLLHMGCYGIGVSRLVGAIIEVSHDNNGIIWPEEIAPFKFSLVNVFSANKE 347 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + E +YA+L DV +DD + G +FA DLLG P QVI+G + +E++ Sbjct: 348 CHNISENLYAKLG--SNDVLYDDTEDSTGIKFARMDLLGMPWQVIIGKTTIEHGLIEVRQ 405 Query: 421 RLTGIREDMSLEEVIN 436 R + MS E+ +N Sbjct: 406 RSSKKSLLMSTEQFLN 421 >gi|56416716|ref|YP_153790.1| prolyl-tRNA synthetase [Anaplasma marginale str. St. Maries] gi|81821288|sp|Q5PAZ5|SYP_ANAMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56387948|gb|AAV86535.1| prolyl-tRNA synthetase [Anaplasma marginale str. St. Maries] Length = 425 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 205/435 (47%), Positives = 283/435 (65%), Gaps = 15/435 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P +++ D +ASHK LR G++ Q++ G+Y+WLPLG K L + I+REE Sbjct: 1 MRLSECYVPTMKDVSSDVVVASHKYSLRAGLVRQNASGLYTWLPLGLKVLRTIERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +G +E+ +P++Q ADLW ES RYDSYG EMLR+ DR+ + M++GPTHEE ++D+ RS Sbjct: 61 MDSSGFLEILMPSVQPADLWRESLRYDSYGPEMLRMQDRSGREMVFGPTHEEAISDVVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP YQIQ KFRDELRPR G+MR REFLMKDAYSFD+ EG SY +F + Sbjct: 121 SLKSYRDLPINLYQIQWKFRDELRPRHGIMRGREFLMKDAYSFDVDFEGVMRSYENVFSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL I +A+SG IGG +SHEF VL TGE+ V+ K +D S+N D+ Sbjct: 181 YFRIFRRLGLVPIAAKADSGAIGGSISHEFHVLVPTGESTVYHDKKALDL---SKN-DY- 235 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 E+ + YAAT D H+ + P + +VS +GIEV H+FY G +YS PM+ Sbjct: 236 ------CTTEEIASVYAATEDAHDPQNCGVDPNDLQVS-KGIEVAHVFYLGDRYSAPMNV 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F DG + MG YGIG R+VAA+IE HD GI WP+S+APFK+ ++N+ ++ Sbjct: 289 KFHDKDGNSAHALMGCYGIGISRLVAAIIEVFHDDVGIRWPESIAPFKVGIVNLLTTNED 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C+ E IYA L+ +DD + G + A DLLG P QVI+G+ FV D VE+K+ Sbjct: 349 CKTTAETIYAALADSS---LYDDSTDSPGVKLARMDLLGMPWQVIIGNSFVKDKVVELKN 405 Query: 421 RLTGIREDMSLEEVI 435 R G E +++ +I Sbjct: 406 RANGATERCTVDALI 420 >gi|222475082|ref|YP_002563497.1| prolyl-tRNA synthetase (proS) [Anaplasma marginale str. Florida] gi|254994925|ref|ZP_05277115.1| prolyl-tRNA synthetase [Anaplasma marginale str. Mississippi] gi|255003060|ref|ZP_05278024.1| prolyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico] gi|222419218|gb|ACM49241.1| prolyl-tRNA synthetase (proS) [Anaplasma marginale str. Florida] Length = 425 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 204/435 (46%), Positives = 284/435 (65%), Gaps = 15/435 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P +++ D +ASHK LR G++ Q++ G+Y+WLPLG K L + I+REE Sbjct: 1 MRLSECYVPTMKDVSSDVVVASHKYSLRAGLVRQNASGLYTWLPLGLKVLRTIEHIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +G +E+ +P++Q ADLW ES RYDSYG EMLR+ DR+ + M++GPTHEE ++D+ RS Sbjct: 61 MDSSGFLEILMPSVQPADLWRESLRYDSYGPEMLRMQDRSGREMVFGPTHEEAISDVVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP YQIQ KFRDELRPR G+MR REFLMKDAYSFD+ EG+ SY +F + Sbjct: 121 SLKSYRDLPINLYQIQWKFRDELRPRHGIMRGREFLMKDAYSFDVDFEGAMRSYENVFSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL I +A+SG IGG +SHEF VL TGE+ V+ K +D S+N D+ Sbjct: 181 YFRIFRRLGLVPIAAKADSGAIGGSISHEFHVLVPTGESTVYHDKKALDL---SKN-DY- 235 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 E+ + YAAT D H+ + P + +VS +GIEV H+FY G +YS PM+ Sbjct: 236 ------CTTEEIASVYAATEDAHDPQNCGVDPNDLQVS-KGIEVAHVFYLGDRYSAPMNV 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F +G + MG YGIG R+VAA+IE HD GI WP+S+APFK+ ++N+ ++ Sbjct: 289 KFHDKNGNSAHALMGCYGIGISRLVAAIIEVFHDDVGIRWPESIAPFKVGIVNLLTTNED 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C+ E IYA L+ +DD + G + A DLLG P QVI+G+ FV D VE+K+ Sbjct: 349 CKTTAETIYAALADSS---LYDDSTDSPGVKLARMDLLGMPWQVIIGNSFVKDKVVELKN 405 Query: 421 RLTGIREDMSLEEVI 435 R G E +++ +I Sbjct: 406 RANGATEKCTVDALI 420 >gi|88657672|ref|YP_507541.1| prolyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] gi|114152195|sp|Q2GG92|SYP_EHRCR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|88599129|gb|ABD44598.1| prolyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] Length = 424 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 203/436 (46%), Positives = 287/436 (65%), Gaps = 16/436 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y++P L+E D + SHK +R G+I Q + GIY+WLPLG K L N+ I+REE Sbjct: 1 MRLSDYYVPTLKETSADISVISHKYSIRAGLIKQIASGIYTWLPLGLKVLKNIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++G++E+ +P +Q A LW ESGRYD YG EMLR+ DRN + M++GPTHEEV+TDI R+ Sbjct: 61 MNKSGSLEILMPLIQPASLWKESGRYDDYGSEMLRITDRNQREMLFGPTHEEVITDILRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 S+++LP YQIQ KFRDELRPR+G+MR REFLMKDAYSFD G+ SYN MF + Sbjct: 121 TPVSHKDLPLILYQIQWKFRDELRPRYGIMRCREFLMKDAYSFDKDFSGAISSYNLMFKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF +LGL I ++A+SGPIGG+LSHEF VLA++GE+ ++ +D ++ + SE+ D Sbjct: 181 YIKIFQKLGLTPIAVKADSGPIGGNLSHEFHVLANSGESTLYYDQDIIEL-MNSESID-- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 VE+ Y A D+H+ + + ++S +GIE+GHIF+ G KYS PM+A Sbjct: 238 --------VEKIKNTYTAADDMHDPQACPISSDKVKIS-KGIEIGHIFHLGDKYSKPMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F ++ + +QMG YGIG R+VAA+IE HD KGIIWP++VAPFK SL+N+ + Sbjct: 289 NFCDSNN-NKLLQMGCYGIGVSRLVAAIIEVFHDNKGIIWPETVAPFKFSLVNLYTSNDK 347 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C+ E ++ +L + G + A DLLG P QVI+G V +E+++ Sbjct: 348 CKKVAENLHMQLYDDVLYDD---TDDSPGIKLARTDLLGMPWQVIIGKSTVEQDLIEVRN 404 Query: 421 RLTGIREDMSLEEVIN 436 RLT + +S E+ +N Sbjct: 405 RLTKDKVLISTEQFLN 420 >gi|255004184|ref|ZP_05278985.1| prolyl-tRNA synthetase [Anaplasma marginale str. Virginia] Length = 425 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 204/435 (46%), Positives = 283/435 (65%), Gaps = 15/435 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P +++ D +ASHK LR G++ Q++ G+Y+WLPLG K L + I+REE Sbjct: 1 MRLSECYVPTMKDVSSDVVVASHKYSLRAGLVRQNASGLYTWLPLGLKVLRTIEHIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +G +E+ +P++Q ADLW ES RYDSYG EMLR+ DR+ + M++GPTHEE ++D+ RS Sbjct: 61 MDSSGFLEILMPSVQPADLWRESLRYDSYGPEMLRMQDRSGREMVFGPTHEEAISDVVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP YQIQ KFRDELRPR G+MR REFLMKDAYSFD+ EG SY +F + Sbjct: 121 SLKSYRDLPINLYQIQWKFRDELRPRHGIMRGREFLMKDAYSFDVDFEGVMRSYENVFSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL I +A+SG IGG +SHEF VL TGE+ V+ K +D S+N D+ Sbjct: 181 YFRIFRRLGLVPIAAKADSGAIGGSISHEFHVLVPTGESTVYHDKKALDL---SKN-DY- 235 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 E+ + YAAT D H+ + P + +VS +GIEV H+FY G +YS PM+ Sbjct: 236 ------CTTEEIASVYAATEDAHDPQNCGVDPNDLQVS-KGIEVAHVFYLGDRYSAPMNV 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F +G + MG YGIG R+VAA+IE HD GI WP+S+APFK+ ++N+ ++ Sbjct: 289 KFHDKNGNSAHALMGCYGIGISRLVAAIIEVFHDDVGIRWPESIAPFKVGIVNLLTTNED 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C+ E IYA L+ +DD + G + A DLLG P QVI+G+ FV D VE+K+ Sbjct: 349 CKTTAETIYAALADSS---LYDDSTDSPGVKLARMDLLGMPWQVIIGNSFVKDKVVELKN 405 Query: 421 RLTGIREDMSLEEVI 435 R G E +++ +I Sbjct: 406 RANGATEKCTVDALI 420 >gi|269958866|ref|YP_003328655.1| prolyl-tRNA synthetase [Anaplasma centrale str. Israel] gi|269848697|gb|ACZ49341.1| prolyl-tRNA synthetase [Anaplasma centrale str. Israel] Length = 425 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 198/435 (45%), Positives = 284/435 (65%), Gaps = 15/435 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P +++ D +ASH+ LR G++ Q++ G+Y+WLPLG K L + I+REE Sbjct: 1 MRLSECYVPTMKDVSSDVIVASHRYSLRAGLVRQNASGLYTWLPLGLKVLRGIERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +G +E+ +P++Q A+LW ES RYDSYG EMLR+ DR+ + M++GPTHEE ++D+ RS Sbjct: 61 MDSSGFLEILMPSVQPAELWRESQRYDSYGLEMLRMQDRSGREMVFGPTHEESISDVVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP + YQ+Q KFRDELRPR G+MR REFLMKDAYSFD+ E + SY+ +F + Sbjct: 121 SLKSYRDLPISLYQMQWKFRDELRPRHGIMRCREFLMKDAYSFDVDFESAMRSYSNVFSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLRIF RLGL +I +A+SG IGG SHEF VL TGE+ V+ + +D S+ + Sbjct: 181 YLRIFRRLGLVAIAAKADSGAIGGSTSHEFHVLVPTGESTVYHDRKALDISRKSDCS--- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +E T YAAT D H+ + P++ +VS +GIEV H+FY G +YS PM+ Sbjct: 238 --------MEDVTGVYAATEDAHDPQNCGVHPDDLQVS-KGIEVAHVFYLGDRYSAPMNV 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F G + MG YGIG R+VAA+IE HD GI WP+S+APF++ ++N+ A + Sbjct: 289 KFHDKSGNSNNALMGCYGIGISRLVAAIIEVFHDDVGIRWPESIAPFRVGIVNLLATNGD 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C+ E IY L+ +DD + G + A DLLG P QVI+G+ FV D VE+K+ Sbjct: 349 CKTTAETIYTALADSS---LYDDSADSPGVKLARMDLLGMPWQVIIGNSFVKDKVVELKN 405 Query: 421 RLTGIREDMSLEEVI 435 R +G+ E ++ +I Sbjct: 406 RASGVTEKCTVGSLI 420 >gi|88608761|ref|YP_506256.1| prolyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] gi|114152220|sp|Q2GE40|SYP_NEOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|88600930|gb|ABD46398.1| prolyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] Length = 436 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 202/440 (45%), Positives = 285/440 (64%), Gaps = 11/440 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+Y+LP+++ + ++ SHK LR G++ Q G+YSWLPLG K L N+ ++IR+E Sbjct: 6 RVSEYYLPLMKNVSGEVKLRSHKYSLRAGLVKQCGAGLYSWLPLGLKVLRNIESVIRQEL 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM +P +Q A LW ESGRY YGKE+L+ DR+D +++GPT+EEV+T I R Sbjct: 66 DSMGMHEMLMPCIQLAKLWEESGRYSDYGKELLKFKDRHDNELLFGPTNEEVITAIVRDD 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SY+ LP Y IQ KFRDE+RPRFG+MR+REFLMKDAYSFD+ + ++ SYNK++ SY Sbjct: 126 LASYKQLPKILYHIQWKFRDEIRPRFGLMRAREFLMKDAYSFDVDQQSARISYNKVYQSY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEF-IVLADTGETQVFCSKDFMDFPIPSENTDFD 240 LRIF RLGL IP RA +G IGG L+HEF I + GE ++F ++ + D Sbjct: 186 LRIFKRLGLNPIPCRANAGVIGGSLNHEFHITTTEGGEGKIFYPEEMGELVDEFCKIDPS 245 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++ + E+ + T + ++ + + +N+ +A+GIEVGHIF FG KYS PM A Sbjct: 246 NEHAVSVMTEKLQELFCFTEECNSSGIGN---DNRICTAQGIEVGHIFLFGEKYSAPMQA 302 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F G DGK MGSYGIG R++AA+IE D KGIIWP+S+APFKI LIN+ H + Sbjct: 303 RFSGRDGKKKNFYMGSYGIGISRLLAAIIEVHSDDKGIIWPESIAPFKIGLINL--HGES 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C A E+I+++L V +DD + G +FA DL+G P Q+IVG +E+K+ Sbjct: 361 CGFA-EEIFSKLD----SVIYDDTADSQGVKFARMDLIGVPFQIIVGKNGPIHGTIELKY 415 Query: 421 RLTGIREDMSLEEVINYASH 440 RL RE SL E+++ SH Sbjct: 416 RLDSKRESRSLNELVSLFSH 435 >gi|254796740|ref|YP_003081576.1| prolyl-tRNA synthetase [Neorickettsia risticii str. Illinois] gi|254589987|gb|ACT69349.1| prolyl-tRNA synthetase [Neorickettsia risticii str. Illinois] Length = 436 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 199/436 (45%), Positives = 280/436 (64%), Gaps = 11/436 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+Y+LP+++ + ++ SHK LR G++ Q G+YSWLPLG K L N+ +IIR+E Sbjct: 6 RVSEYYLPLMKNVSGEVKLRSHKYSLRAGLVKQCGAGLYSWLPLGLKVLKNIESIIRQEL 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM +P +Q A LW ESGRY YG+E+L+ DR+D +++GPT+EEV+T I R Sbjct: 66 DSMGMHEMLMPCIQLAKLWEESGRYSDYGRELLKFKDRHDNELLFGPTNEEVITAIVRDD 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SY+ LP Y IQ KFRDE+RPRFG+MR+REFLMKDAYSFD+ + ++ SYNK++ SY Sbjct: 126 LASYKQLPKILYHIQWKFRDEIRPRFGLMRAREFLMKDAYSFDVDQQSARISYNKVYQSY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEF-IVLADTGETQVFCSKDFMDFPIPSENTDFD 240 LRIF RLGL IP RA +G IGG L+HEF I + GE ++F ++ + D Sbjct: 186 LRIFKRLGLNPIPCRANAGVIGGSLNHEFHITTTEGGEGKIFYPEEIGELVDEFCKIDPS 245 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +++ + + T + ++ + D +N+ +A+GIEVGHIF FG KYS PM A Sbjct: 246 DEHAVSVMTAKLQELSCFTEECNSSSIED---DNRICAAQGIEVGHIFLFGEKYSAPMQA 302 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F DG MGSYGIG R++AA+IE D KGIIWP+S+APFK+ LIN+ H++ Sbjct: 303 RFSDRDGMKKNFYMGSYGIGISRLLAAIIEVYSDDKGIIWPESIAPFKVGLINL--HEES 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C A E+I+++L V +DD + G +FA DL+G P Q+IVG + D VE+K Sbjct: 361 CGLA-EEIFSKLD----SVIYDDTTDSQGVKFARMDLIGVPFQIIVGKNAIIDGTVELKC 415 Query: 421 RLTGIREDMSLEEVIN 436 RL RE + E+I+ Sbjct: 416 RLDSKRESCNFNELIS 431 >gi|88607069|ref|YP_505231.1| prolyl-tRNA synthetase [Anaplasma phagocytophilum HZ] gi|114152168|sp|Q2GK70|SYP_ANAPZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|88598132|gb|ABD43602.1| prolyl-tRNA synthetase [Anaplasma phagocytophilum HZ] Length = 426 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 199/440 (45%), Positives = 284/440 (64%), Gaps = 16/440 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+++ P ++ D ASHK +R G++ Q + GIY+ LPLG L V IIREE Sbjct: 1 MRLSEFYSPTVKNVSSDVVSASHKYSIRAGIVSQTASGIYTLLPLGLMVLRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E+ +PT+Q ADLW ES RYDSYG+E++R+ DR + M+ GPTHEEV+TD+ RS Sbjct: 61 INAVGFSEILMPTMQPADLWKESQRYDSYGQELIRIHDRGGREMVLGPTHEEVVTDLVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP YQIQ KFRDELRPR G++RSREFLM DAYSFD E + +Y+ +F + Sbjct: 121 SLKSYRDLPVNLYQIQWKFRDELRPRNGILRSREFLMMDAYSFDTDFEKAMKTYDAVFRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y + F R+ L++I ++A+ G IGG +SHEF VL TGE+ V+ + ++ SE D+ Sbjct: 181 YRKAFKRMNLQTIALKADMGAIGGSVSHEFHVLTPTGESTVYYDERALEL---SEMNDYG 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +E+ YAAT D+H+EK PE+ + +ARGIEVGHIFY +YS M+ Sbjct: 238 --------IEELKEVYAATDDMHDEKSCGIAPEDLK-TARGIEVGHIFYLDDRYSRTMNV 288 Query: 301 TFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 F DG +V+MG YGIG R++ A+IE HD GI WP SVAPFK+ ++N+ + ++ Sbjct: 289 KFCNTDGHSGTHVKMGCYGIGISRLIGALIEVFHDDAGIKWPLSVAPFKVGIVNLFSKNE 348 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 C+ E+I++ L D +DD + G + + DL+G P QVIVG+ F+ D +E+K Sbjct: 349 ECKRVSERIHSVLPN---DSLYDDRDDTPGVKLSRMDLIGLPWQVIVGNSFIKDGVLELK 405 Query: 420 HRLTGIREDMSLEEVINYAS 439 +R TG E +S+++V++ S Sbjct: 406 NRATGDIELLSVDDVVSRIS 425 >gi|293374695|ref|ZP_06621003.1| proline--tRNA ligase [Turicibacter sanguinis PC909] gi|325840610|ref|ZP_08167091.1| proline--tRNA ligase [Turicibacter sp. HGF1] gi|292646609|gb|EFF64611.1| proline--tRNA ligase [Turicibacter sanguinis PC909] gi|325490259|gb|EGC92592.1| proline--tRNA ligase [Turicibacter sp. HGF1] Length = 420 Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 189/448 (42%), Positives = 271/448 (60%), Gaps = 34/448 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F+P L+E P DAEI SH+ +LR G I Q + G+Y++LPL ++ L+NV I+R+E Sbjct: 1 MKQSMMFIPTLREVPSDAEIRSHQFLLRAGFIKQVAAGVYTYLPLAKRVLNNVEGIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P LQ +LW ESGR+D YG E++RL DRN++ GPTHEEV+T + R Sbjct: 61 LDAIGGNELLMPALQPKELWDESGRWDVYGSELMRLTDRNNREFALGPTHEEVITHVVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T YQIQ KFRDE RPRFG+MR REF+MKDAYSF T E +YN + Sbjct: 121 FLNSYKKLPLTVYQIQTKFRDEARPRFGLMRGREFIMKDAYSFHATQESLDEAYNNFVKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG IGG S EF+ LA+ GE Sbjct: 181 YTNIFTRCGLNFRMVEADSGQIGGSQSAEFMALAEVGE---------------------- 218 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 ++IV T +AA +V + ++ P+ V A+GIEVGH+F GTKYS PM Sbjct: 219 -----DTIVYSTTGSFAANIEVADLEVGAPSPDGVGVVAHAKGIEVGHVFKLGTKYSEPM 273 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKA 356 +A F + K + MG YGIG RV+ AVIE ++D G+IWP +APF I + +++K Sbjct: 274 NAVFLDENQKKQPIIMGCYGIGVSRVMMAVIEQNNDENGMIWPKGIAPFDIHVVPVDVKK 333 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 DQ+ +A E IYA L G +V DD E+ G +F+ ADL+G P+++ VG + ++D V Sbjct: 334 ADQL--EAAENIYAELKAAGFEVLLDDRKERAGVKFSDADLIGLPIRITVG-RGIADGIV 390 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 E+K R TG ++++ +++ + ++ Sbjct: 391 EVKVRQTGEVAEVAVADLMTFVKEKYET 418 >gi|118595268|ref|ZP_01552615.1| prolyl-tRNA synthetase [Methylophilales bacterium HTCC2181] gi|118441046|gb|EAV47673.1| prolyl-tRNA synthetase [Methylophilales bacterium HTCC2181] Length = 411 Score = 358 bits (920), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 183/424 (43%), Positives = 270/424 (63%), Gaps = 36/424 (8%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK+++ +E P +AE+ SHKLM+R G+I + G+Y+W+P+G + L + IREE Sbjct: 1 MKASKFYISTFKEAPAEAELTSHKLMIRAGLIKKLGSGLYTWMPMGLRVLKKIENTIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW E+GR++ +G +ML+++DR+D+ +GPTHEEV+TD+ R+ Sbjct: 61 MQQAGAVELLMPAIQPAELWEETGRWELFGPQMLKISDRHDRPFCFGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ+KFRDE+RPRFGVMR+REFLMKDAYSF E KH+Y+ MF + Sbjct: 121 ELNSYKQLPMNFYQIQMKFRDEIRPRFGVMRAREFLMKDAYSFHADIESLKHTYDLMFKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF +LGL ++A++G IGGD SHEF VLAD+GE ++ + E++DF Sbjct: 181 YNAIFTKLGLIFRAVQADNGAIGGDGSHEFHVLADSGEDEI----------VYDEHSDF- 229 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV-SARGIEVGHIFYFGTKYSLPMS 299 AA +V + P+ + + + RGIEVGHIF GTKYS M Sbjct: 230 ----------------AANIEVAKDH-----PDKRNLKTCRGIEVGHIFQLGTKYSEAMK 268 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 ATF GK + MG YGIG R++AA IE +HD KGII+P+S+APF++ + I +D+ Sbjct: 269 ATFINQSGKPSPMIMGCYGIGVSRIIAAAIEQNHDDKGIIFPESMAPFEVIITPI-GYDK 327 Query: 360 --VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ + +Y L G DV DD G + G F+ A+L+G P ++ V + ++K E Sbjct: 328 SSSVKEGVDDLYQLLIAEGYDVLLDDRGLRPGIMFSEAELIGIPHRITVSETTLKENKYE 387 Query: 418 IKHR 421 K+R Sbjct: 388 YKNR 391 >gi|196019376|ref|XP_002118967.1| hypothetical protein TRIADDRAFT_9363 [Trichoplax adhaerens] gi|190577501|gb|EDV18547.1| hypothetical protein TRIADDRAFT_9363 [Trichoplax adhaerens] Length = 408 Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 182/423 (43%), Positives = 272/423 (64%), Gaps = 19/423 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y LP ++ +A++ SHKLML++GMI Q S G+YSWLPLG L+ + +IR E Sbjct: 1 MRLSNYLLPTTKDISSEAKLMSHKLMLKSGMIKQSSSGVYSWLPLGLNVLNKLANLIRVE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRY--DSYGK-EMLRLADRNDKAMIYGPTHEEVMTDI 117 N+ E+ +P+LQ +W +SGR DS K ++ + D+ A + P+ EE + ++ Sbjct: 61 LNKINCHEIVLPSLQLLSIWEKSGRAVEDSDMKSQIFHIKDQKQTAYVLPPSGEEAVAEL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 F+S + SY+++ YQI KFRDE+RPR GVMR++EFLMKDAYSFD+ E + SY K+ Sbjct: 121 FKSSVHSYKDVSKILYQITWKFRDEIRPRHGVMRAKEFLMKDAYSFDVNKEKALISYEKI 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD-TGETQVFCSKDFMDFPIPSEN 236 F +YL +F ++GL+ IP+ A +G +GG+ SHEF VL+D GE+ ++ ++ N Sbjct: 181 FKAYLEVFKKIGLRVIPVLAPTGAMGGNYSHEFHVLSDKNGESTIYYQEEL-------NN 233 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 DD SL + YA + H + D K + ++ IEVGH+FY GTKYS Sbjct: 234 YLKDDEFSLKG----YEKFYAKEEEKH---VVDDCKTLKIIKSKSIEVGHLFYLGTKYSK 286 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 ++ T++ ++G+ + +MG YGIG R++AA+IES HD KGIIWPD+++PFK+++INIKA Sbjct: 287 SLNCTYQDSNGELQFPEMGCYGIGVTRLIAAIIESCHDDKGIIWPDAISPFKLAIINIKA 346 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D VCR+ +K+YA LS DV +DD + G +FA DL+G L++I+G K ++ KV Sbjct: 347 EDSVCREFSDKLYANLSG-KYDVLYDDTNKSPGKKFADMDLIGINLEIIIGPKHAANKKV 405 Query: 417 EIK 419 E+K Sbjct: 406 ELK 408 >gi|99034562|ref|ZP_01314532.1| hypothetical protein Wendoof_01000659 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 339 Score = 356 bits (913), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 181/358 (50%), Positives = 246/358 (68%), Gaps = 19/358 (5%) Query: 84 GRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDEL 143 GRYD YGKEMLR+ DR+++ M++GPTHEE+ TD+ R +KSY++LP YQIQ KFRDE+ Sbjct: 1 GRYDDYGKEMLRIKDRHEEDMLFGPTHEEIATDLIRDVVKSYKDLPLCLYQIQWKFRDEV 60 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 RPR+GVMR REFLMKDAYSFD+ EG+ +SYN M+ +Y++IF R+G I +RA++GPIG Sbjct: 61 RPRYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKTYIKIFKRMGFTPIGVRADTGPIG 120 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 G+LSHEF +LA+TGE+ ++ F SE + +DI SL SI YA D+H Sbjct: 121 GNLSHEFHILANTGESTLYYDNKF------SELLESEDIESLKSI-------YAVADDMH 167 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + + E VS +GIE+GHIFYFG KYS PM A+ DGK+ + MGSYGIG R Sbjct: 168 DPETCPISQEQLNVS-KGIEIGHIFYFGDKYSKPMKASVTSQDGKNVNIHMGSYGIGVSR 226 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 +V A+IE+ HD KGIIWP+ VAPF+I LIN++ +A +KIY L +V +DD Sbjct: 227 LVGAIIEAFHDDKGIIWPEEVAPFRIGLINLQTK---VTEAADKIYKALK--SDEVLYDD 281 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 +G +F+ DL+G P Q+IVG K VS++ VE+K+R TG ++M +EE IN+ S + Sbjct: 282 TEGSVGVKFSRMDLIGLPWQIIVGKKAVSENIVEVKNRATGEVKEMQIEEAINHFSAK 339 >gi|206603805|gb|EDZ40285.1| Prolyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG'] Length = 422 Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 191/432 (44%), Positives = 261/432 (60%), Gaps = 29/432 (6%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L E P +AE+ SH+LMLR G++ + + G+YS+LP+ +AL V AIIREE N G E+ Sbjct: 11 LHEEPAEAEVVSHRLMLRAGLVRKLAGGVYSYLPMAVRALRKVEAIIREEMNSAGGQEVL 70 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 +P LQ +DLW ++GR+ +YG E+ RL DR+++A GPTHEEV+TD+ I+SYR LPF Sbjct: 71 LPALQPSDLWEKTGRWQAYGPELFRLHDRHERAFALGPTHEEVITDLVSQVIRSYRQLPF 130 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 YQIQ KFRDE RPRFG++R REF+MKDAYSF ++ E ++ Y +M +Y RIF RLGL Sbjct: 131 IAYQIQTKFRDERRPRFGILRGREFIMKDAYSFSVSEENARQIYTRMQEAYGRIFLRLGL 190 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + A+SG IGG+LSHEF+V+AD+GE T V C K S S + Sbjct: 191 DHRMVEADSGLIGGNLSHEFMVMADSGEDTVVTCEK-----------------CSWASNI 233 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E+ AP A V L S IEVGH+FY G KYS PM TF + GK+ Sbjct: 234 EK--APDARVCPVCGSVL---------ESRTAIEVGHVFYLGHKYSTPMETTFLDSAGKE 282 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 MG YGIG R++AA IE SHD KGIIWP ++AP++ +++ + R+ + Sbjct: 283 VPFFMGCYGIGVSRILAATIEQSHDDKGIIWPVAMAPYRTAVLPLGPGMSERREVLSLLE 342 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 + S + ++DD + G +F ADL GFP QVI+G + V E+K R TG R + Sbjct: 343 SLESLWPGESYFDDREIRPGMKFQDADLRGFPFQVILGDRHVDKGDGEVKIRRTGERLVL 402 Query: 430 SLEEVINYASHR 441 L+++ S R Sbjct: 403 PLKDIPALLSAR 414 >gi|124515073|gb|EAY56584.1| Prolyl-tRNA synthetase [Leptospirillum rubarum] Length = 422 Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 190/432 (43%), Positives = 258/432 (59%), Gaps = 29/432 (6%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L E P +AE+ SH+LMLR G + + + G+YS+LP+ +AL V +IIREE N G E+ Sbjct: 11 LHEEPAEAEVVSHRLMLRAGFVRKLAGGVYSYLPMAVRALRKVESIIREEMNSAGGQEVL 70 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 +P LQ +DLW ++GR+ +YG E+ RL DR+++A GPTHEEV+TD+ I+SYR LPF Sbjct: 71 LPALQPSDLWEKTGRWQAYGPELFRLHDRHERAFALGPTHEEVITDLVSQIIRSYRQLPF 130 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 YQIQ KFRDE RPRFG++R REF+MKDAYSF + E ++ Y +M +Y RIF RLGL Sbjct: 131 LAYQIQTKFRDERRPRFGILRGREFIMKDAYSFSASEENARQIYARMQEAYGRIFLRLGL 190 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + A+SG IGG+LSHEF+V+AD+GE T V C K S S + Sbjct: 191 DHRMVEADSGLIGGNLSHEFMVMADSGEDTVVTCEK-----------------CSWASNI 233 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E+ AP A V L S IEVGH+FY G KYS PM TF + GK+ Sbjct: 234 EK--APDARVCPVCGSAL---------TSRTAIEVGHVFYLGHKYSAPMETTFLDSAGKE 282 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 MG YGIG R++AA IE SHD KGIIWP ++AP++ +++ + R+ + Sbjct: 283 VPFFMGCYGIGVSRILAATIEQSHDDKGIIWPVAMAPYRTAVLPLGPGMSERREVLSLLE 342 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 + S + ++DD + G +F ADL GFP QVI+G + V E+K R TG R + Sbjct: 343 SLESLWPGEAYFDDREIRPGMKFQDADLRGFPFQVILGDRHVDKGNGEVKIRRTGERLVL 402 Query: 430 SLEEVINYASHR 441 L ++ S R Sbjct: 403 PLRDIPALLSAR 414 >gi|251772092|gb|EES52662.1| prolyl-tRNA synthetase [Leptospirillum ferrodiazotrophum] Length = 429 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 181/450 (40%), Positives = 256/450 (56%), Gaps = 30/450 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++ E+P +AE SH+LMLR G + + + G+Y +LP G + L V I+REE Sbjct: 1 MRTTRLPYVTFHEDPAEAETVSHRLMLRGGYVRKVAGGLYDFLPFGARVLRRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ A++W ++GR++ YGKE+ RL DR+D++ GPTHEEV+T++ Sbjct: 61 MDRAGAFEILMPALQPAEMWEKTGRWEKYGKELFRLTDRHDRSFALGPTHEEVVTELASG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + E Y M + Sbjct: 121 LLNSYRQLPVTLYQIQTKFRDEMRPRFGLMRGREFVMKDAYSFARSKEEGAECYRIMQEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDF 239 Y RIF RLGL + A++G IGG SHEF+VLA +GE T VFC Sbjct: 181 YFRIFARLGLSVRMVEADTGNIGGYSSHEFMVLAPSGEDTVVFCG--------------- 225 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + YA+ ++ L + IEVGH+F G +YS PM Sbjct: 226 -------------SCRYASNVELAGAATHCPLCQAPLERTTAIEVGHVFDLGDRYSAPME 272 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A F DG++ MG YGIG R++AA IE SHD GIIWP ++APF ++++ + D Sbjct: 273 AGFLDPDGRETLFHMGCYGIGVSRLLAAAIEQSHDDAGIIWPTAMAPFAVAVLPLGGRDA 332 Query: 360 VCRDACEKIYARL-SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +I L + +V DD + G +FA ADL GFP+QVI+G K + +++ EI Sbjct: 333 ELSEKALRIAGLLEERFPEEVLVDDRDLRAGVKFADADLCGFPIQVILGEKGLRENRAEI 392 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNNRPV 448 K R +G R + L + + + + V Sbjct: 393 KVRSSGERNTVDLSALSEWIADHLGSGGAV 422 >gi|254730106|ref|ZP_05188684.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] Length = 213 Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 148/210 (70%), Positives = 181/210 (86%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 4 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 64 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 124 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 YLR F R+GL++IPMRA++GPIGGDLSHEF Sbjct: 184 YLRTFARVGLQAIPMRADTGPIGGDLSHEF 213 >gi|260757796|ref|ZP_05870144.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260668114|gb|EEX55054.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] Length = 210 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 148/210 (70%), Positives = 181/210 (86%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 YLR F R+GL++IPMRA++GPIGGDLSHEF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEF 210 >gi|78777058|ref|YP_393373.1| prolyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] gi|114152275|sp|Q30S93|SYP_SULDN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78497598|gb|ABB44138.1| Prolyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] Length = 435 Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 172/449 (38%), Positives = 255/449 (56%), Gaps = 34/449 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MRRS+ F+P +E P DA + SHK ++R G I+Q G+Y++LPLG+ L+ + A+++EE Sbjct: 1 MRRSRAFIPTAKEAPSDATLPSHKFLVRGGFINQQGAGLYNFLPLGKIVLEKIRAVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ + + LW SGR ++ GKEMLR+ DR+ + PT+EE M ++ ++ Sbjct: 61 LDLAGCNEVQLSFVTPIGLWERSGRSEAMGKEMLRINDRHQNEFVLSPTNEEAMVELVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP YQI KFRDE RPR+G++R REFLMKD YSF + + ++ M + Sbjct: 121 RVTSYKDLPLNLYQINTKFRDEARPRYGLLRGREFLMKDGYSFHSSTQDMIREFDLMEET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTD- 238 Y +IF RLGL + A+SG IGGD S EF VLAD+GE T + C ++ E D Sbjct: 181 YKKIFTRLGLDFRVVAADSGAIGGDGSKEFHVLADSGEDTLIVCQS--CNYGANIETIDE 238 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE---NKRVSA-------RGIEVGHIF 288 F D I D NEK ++ L E +++ S +GIEVGHIF Sbjct: 239 FKDKI-----------------DELNEKSYEELKELKIDQKCSCGANLHFKKGIEVGHIF 281 Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 GTKYS + A F +G+ +M ++GIG R+VAA+IE +HD G IW AP+ Sbjct: 282 QLGTKYSAALEANFSDENGRSKPFEMATFGIGVSRLVAAIIEQNHDESGCIWTKESAPYI 341 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 ++++ D+ E +YA+L DV +DD E+ G + A+L+GFP +I+G Sbjct: 342 VNIMVSNVKDEAQMSLGEDLYAKLRAAKVDVIFDDTKERFGFKMKDAELIGFPYTLIIG- 400 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVINY 437 K + V+I R T +E +S+E Y Sbjct: 401 KELEGGLVQIFDRKT--KESISVESSSAY 427 >gi|254458440|ref|ZP_05071865.1| prolyl-tRNA synthetase [Campylobacterales bacterium GD 1] gi|207084748|gb|EDZ62035.1| prolyl-tRNA synthetase [Campylobacterales bacterium GD 1] Length = 434 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 165/434 (38%), Positives = 248/434 (57%), Gaps = 30/434 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MRRS+ F+P +E P DA + SH+ ++R G I+Q G+Y++LPLG+ L+ + I++EE Sbjct: 1 MRRSRAFIPTTKEVPNDATLPSHQFLVRGGFINQQGAGLYNFLPLGKIVLEKIRTIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ + + LW SGR D+ GKEMLR+ DR+ + PT+EE M ++ ++ Sbjct: 61 LDMAGCNEVQLSFVTPIGLWDRSGRADAMGKEMLRIQDRHQNDFVLSPTNEEAMVELVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP YQI KFRDE RPR+G++R REFLMKD YSF + E ++ M + Sbjct: 121 RVTSYKDLPLNLYQINTKFRDEARPRYGLLRGREFLMKDGYSFHASTEDMIREFDLMEET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL ++A+SG IGG+ S EF VLAD+GE D I E+ D+ Sbjct: 181 YKKIFTRLGLDFRVVQADSGAIGGEGSKEFHVLADSGE----------DTIIVCESCDYG 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS-----------ARGIEVGHIFY 289 ++ +I + D NEK ++ L + K +S +GIEVGHIF Sbjct: 231 --ANIETIFDN-----EEEVDALNEKTYEEL-QTKEISEKCSCGGNLSFKKGIEVGHIFQ 282 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 GTKYS + A F +GK +M ++GIG R+VA+VIE +HD G IW AP+ I Sbjct: 283 LGTKYSSALEANFSDENGKPRPFEMATFGIGVSRLVASVIEQNHDENGCIWTKETAPYTI 342 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 +++ D+ E++Y +L + +DD E+ G + A+L+GFP VI+G K Sbjct: 343 NIMVSNIKDETQMTLGEELYLKLLGENVEAMFDDRKERFGFKMKDAELIGFPYTVIIG-K 401 Query: 410 FVSDSKVEIKHRLT 423 + + V++ R T Sbjct: 402 ELDNGLVQVYDRKT 415 >gi|260596616|ref|YP_003209187.1| prolyl-tRNA synthetase [Cronobacter turicensis z3032] gi|260215793|emb|CBA28231.1| Prolyl-tRNA synthetase [Cronobacter turicensis z3032] Length = 572 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 148/314 (47%), Positives = 197/314 (62%), Gaps = 29/314 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q A+LW ESGR++ YG E+LR DR D+A + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPAELWQESGRWEQYGPELLRFVDRGDRAFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQESLQQTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL P++A++G IGG SHEF VLA +GE + S+ +DF Sbjct: 181 YSKIFTRMGLDFRPVQADTGSIGGSASHEFQVLAQSGEDDIVF----------SDTSDFA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L V T AAT ++ L D+ N + A +E ++SLP+ Sbjct: 231 ANIELAEAVAPLTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFSLPVEK 276 Query: 301 T-----FKGADGKD 309 T K A+G D Sbjct: 277 TVKTLLVKAAEGSD 290 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 113/182 (62%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSDALKASVQGEDGRNQVLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 444 YGIGVTRVVAAAIEQNHDDRGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYAELRAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P V++G + + + ++E K+R G ++ + +++ Sbjct: 504 GIDVLMDDRKERPGVMFADMELIGIPHTVVIGDRNLDNDEIEYKYRRDGEKKMIKTGDIL 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|167586051|ref|ZP_02378439.1| prolyl-tRNA synthetase [Burkholderia ubonensis Bu] Length = 578 Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 133/229 (58%), Positives = 173/229 (75%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNEFVIGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD +G SY KM+ + Sbjct: 121 QIRSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDADGLAESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF RLGL+ P+ A+SG IGG+ SHEF V+ADTGE + +C S DF Sbjct: 181 YVRIFTRLGLEFRPVAADSGSIGGNFSHEFHVIADTGEDAIAYCPSSDF 229 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/171 (40%), Positives = 104/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N + D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADIRNVQKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFIDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YG+G R++ A IE + D +GIIWP+S+APF++ L + +D+ R+A +K+YA Sbjct: 442 LMGCYGVGITRILGAAIEQNFDDRGIIWPESIAPFEVVLCPM-GYDRSDAVREATDKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + + K+E + R Sbjct: 501 ELAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKLEYQGR 551 >gi|156935287|ref|YP_001439203.1| prolyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894] gi|166980122|sp|A7MI22|SYP_ENTS8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|156533541|gb|ABU78367.1| hypothetical protein ESA_03144 [Cronobacter sakazakii ATCC BAA-894] Length = 572 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 144/303 (47%), Positives = 193/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q A+LW ESGR++ YG E+LR DR D+A + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPAELWQESGRWEQYGPELLRFVDRGDRAFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQESLQQTYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL P++A++G IGG SHEF VLA +GE + S+ +DF Sbjct: 181 YSKIFTRMGLDFRPVQADTGSIGGSASHEFQVLAQSGEDDIVF----------SDTSDFA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L V T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAVAPLTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 113/182 (62%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSDALKASVQGEDGRNQVLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 444 YGIGVTRVVAAAIEQNHDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYAELRAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P V++G + + + ++E K+R G ++ + +++ Sbjct: 504 GIDVLMDDRKERPGVMFADMELIGIPHTVVIGDRNLDNDEIEYKYRRDGEKKMIKTGDIL 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|242278211|ref|YP_002990340.1| prolyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] gi|259511591|sp|C6BYX7|SYP_DESAD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|242121105|gb|ACS78801.1| prolyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] Length = 580 Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 127/226 (56%), Positives = 170/226 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y++P L+E+P +AE+ SHKL++R GMI + + GIY++LPLG K+++ V AI+REE Sbjct: 1 MRLSRYYIPTLKEDPSEAEVVSHKLLMRAGMIRKLTSGIYNYLPLGLKSVNKVAAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q DLW E+GR+D YGKE+LR+ DR+ + GPTHEEV+TD+ R Sbjct: 61 MNRAGALEVLMPMVQPGDLWQETGRWDYYGKELLRVKDRHGRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G++ SY MF + Sbjct: 121 EVKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDKDEAGAEESYRGMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P++A+SG IGGD SHEF VLADTGE + KD Sbjct: 181 YKKAFSRIGLNFRPVQADSGAIGGDFSHEFHVLADTGEDTIAVCKD 226 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 64/153 (41%), Positives = 101/153 (66%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGH+F G+KYS M ATF +GK + MG YGIG R+VA+ IE ++D G I Sbjct: 407 KGIEVGHVFKLGSKYSKSMEATFLDENGKTQPMVMGCYGIGVSRIVASAIEQNNDENGAI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P ++APF++ +I++ D+ + E+ Y L ++G D +DD E+ G +FA ADL+G Sbjct: 467 FPPTIAPFELCVISLGGKDEAVNEKAEEFYNELMEMGIDAAYDDRKERPGVKFADADLIG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +P+Q+++G K + + VE K+R TG + ++ LE Sbjct: 527 YPMQLVIGGKGLKNGIVEAKNRKTGEKIELPLE 559 >gi|239907072|ref|YP_002953813.1| prolyl-tRNA synthetase [Desulfovibrio magneticus RS-1] gi|259511592|sp|C4XTD0|SYP_DESMR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|239796938|dbj|BAH75927.1| prolyl-tRNA synthetase [Desulfovibrio magneticus RS-1] Length = 575 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 134/224 (59%), Positives = 168/224 (75%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y+ P L+E P +AE+ SHKL+LR GMI + + GIY++LPLG KAL+NV I+REE Sbjct: 1 MRLSRYYAPTLKETPAEAEVISHKLLLRAGMIRKLTAGIYTYLPLGLKALNNVAKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q ADLW ESGR+D YG+E+LR DR+D+ GPTHEEV+TD+ R Sbjct: 61 MDRAGALEILMPAVQPADLWKESGRWDFYGRELLRFVDRHDRESCLGPTHEEVVTDLVRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G+ SY M+ + Sbjct: 121 EIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDKDDSGADASYWGMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y RIF RLGLK + A+SG IGG SHEF+VLADTGE T V C Sbjct: 181 YARIFKRLGLKFRAVAADSGAIGGSFSHEFMVLADTGEDTIVAC 224 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 65/153 (42%), Positives = 98/153 (64%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGH+F G KYS ++ATF GK+ ++ MG YGIG R+VA+ IE +HD GI+ Sbjct: 403 KGIEVGHVFKLGLKYSKALNATFLDEAGKEQFMIMGCYGIGVSRIVASAIEQNHDDGGIV 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P ++APF+ +LIN+ D+ ++IYA L+ G + DD E+ G +F ADL+G Sbjct: 463 FPPTIAPFEAALINLSPKDETACAKADEIYAALTAAGIETLLDDRDERPGVKFKDADLMG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 P+Q+ +G K ++ VE K R TG + ++ LE Sbjct: 523 HPIQLTLGGKGLARGIVETKDRRTGEKGELPLE 555 >gi|322420273|ref|YP_004199496.1| prolyl-tRNA synthetase [Geobacter sp. M18] gi|320126660|gb|ADW14220.1| prolyl-tRNA synthetase [Geobacter sp. M18] Length = 573 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 130/225 (57%), Positives = 167/225 (74%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P ++E P DAE+ SHKLMLR GMI + + GIY++LPLG +++ V I+REE Sbjct: 1 MRYSQYFIPTVKETPSDAEVISHKLMLRAGMIRKLAAGIYNYLPLGLRSIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR+D YGKE+LR DR D GPTHEEV+TD+ R Sbjct: 61 MNRAGAIELLMPAVQPAELWKESGRWDFYGKELLRFKDRKDAEFCMGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR +P YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ SY KM+ + Sbjct: 121 EIRSYRQMPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVNEAGADVSYEKMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CS 224 Y RIF R GLK + A++G IGG+ SHEF+VLAD+GE + CS Sbjct: 181 YRRIFERCGLKFRAVEADTGTIGGNYSHEFMVLADSGEDAIVSCS 225 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 73/167 (43%), Positives = 107/167 (64%), Gaps = 3/167 (1%) Query: 261 DVHNEKLFDSLP--ENKRVSA-RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N + D+ P E+ ++ RGIEVGH+F GTKYS ++A+F A+GK+ + MG Y Sbjct: 383 DIRNVVIGDACPRCESGKLEIWRGIEVGHVFKLGTKYSKALNASFLDANGKEQIIFMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R VAA IE +HD GII+P +APF + + A + + A E+IY+ L + G Sbjct: 443 GIGIGRTVAACIEQNHDENGIIFPIPIAPFHCIVSALSAKEDEVKAASEQIYSELLEAGV 502 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +V DD E+ G +F ADL+G PL+++VG+K + D KVE+K R +G Sbjct: 503 EVLLDDRDERPGFKFKDADLIGIPLRLVVGAKNLVDGKVELKERRSG 549 >gi|253699963|ref|YP_003021152.1| prolyl-tRNA synthetase [Geobacter sp. M21] gi|259511598|sp|C6E496|SYP_GEOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|251774813|gb|ACT17394.1| prolyl-tRNA synthetase [Geobacter sp. M21] Length = 573 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 129/225 (57%), Positives = 167/225 (74%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P ++E P DAE+ SHKLMLR GMI + + GIY++LP G +++ V AI+REE Sbjct: 1 MRYSQYFIPTVKETPSDAEVISHKLMLRAGMIRKLAAGIYNYLPFGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YGKE+LR DR D GPTHEEV+TD+ R Sbjct: 61 MNRAGAIELLMPAVQPAELWKESGRWEFYGKELLRFNDRKDAEFCMGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ SY KM+ + Sbjct: 121 EVRSYRQLPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVNEAGADVSYEKMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CS 224 Y RIF R GLK + A++G IGG+ SHEF+VLAD+GE + CS Sbjct: 181 YRRIFERCGLKFRAVEADTGTIGGNYSHEFMVLADSGEDAIVSCS 225 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 3/178 (1%) Query: 261 DVHNEKLFDSLPE---NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N + D+ P K RGIEVGH+F GTKYS + ATF ADGK+ + MG Y Sbjct: 383 DIRNVVIGDACPRCDSGKLEIWRGIEVGHVFKLGTKYSKALKATFLDADGKEQTIFMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R VAA IE +HD GII+P +APF+ + ++ + + A E IY L + G Sbjct: 443 GIGVGRTVAACIEQNHDENGIIFPIPIAPFQCIISSLSVKEDEVKAASESIYQELLEAGI 502 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +V DD E+ G +F ADL+G PL+++VG+K +++ KVE+K R +G E + + E I Sbjct: 503 EVLLDDRDERPGFKFKDADLIGIPLRIVVGAKALAEGKVELKERRSGEVEVLPIAEAI 560 >gi|323700409|ref|ZP_08112321.1| prolyl-tRNA synthetase [Desulfovibrio sp. ND132] gi|323460341|gb|EGB16206.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans ND132] Length = 580 Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 126/221 (57%), Positives = 168/221 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y++P L+E+P DAE+ SHKL++R GMI + + GIY++LPLG +A++ V I+REE Sbjct: 1 MRLSRYYIPTLKEDPADAEVVSHKLLMRAGMIRKLTSGIYNYLPLGLRAINKVAQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +PT+Q ADLW E+GR+D YGKE+LR DRND+ GPTHEEV+TD+ R Sbjct: 61 MNRAGALEVLLPTVQPADLWRETGRWDYYGKELLRFKDRNDRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE+RPRFG+MR REF+MKD YSFD G++ SY MF + Sbjct: 121 EIKSYKQLPVNLYQVQTKFRDEIRPRFGLMRGREFIMKDGYSFDKDEAGAEQSYWDMFNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y F R+GL+ P++A+SG IGG SHEF+VLA+TGE + Sbjct: 181 YKAAFTRIGLRFKPVQADSGAIGGSFSHEFMVLAETGEDTI 221 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 70/153 (45%), Positives = 102/153 (66%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGH+F G KYS M ATF +GK Y+ MG YGIG R+VA+ IE + D G Sbjct: 406 KGIEVGHVFKLGLKYSKKMEATFLDENGKSQYMIMGCYGIGVSRIVASAIEQNFDENGCC 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P S+APF++ LI++ DQ D E++YA L K+G DV +DD GE+ G +FA ADL+G Sbjct: 466 FPPSIAPFEVCLISLGGKDQDVADKAEELYAELMKLGVDVAFDDRGERPGVKFAEADLIG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +P+Q+++G K + + +E K R TG + ++ L+ Sbjct: 526 YPMQLVLGGKGLKNGIIEAKDRKTGEKVELPLD 558 >gi|197119263|ref|YP_002139690.1| prolyl-tRNA synthetase [Geobacter bemidjiensis Bem] gi|226701292|sp|B5EIT9|SYP_GEOBB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|197088623|gb|ACH39894.1| prolyl-tRNA synthetase [Geobacter bemidjiensis Bem] Length = 573 Score = 283 bits (723), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 129/225 (57%), Positives = 166/225 (73%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P ++E P DAE+ SHKLMLR GMI + + GIY++LP G +++ V AI+REE Sbjct: 1 MRYSQYFIPTVKETPSDAEVISHKLMLRAGMIRKLAAGIYNYLPFGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YGKE+LR DR D GPTHEEV+TD+ R Sbjct: 61 MNRAGAIELLMPAVQPAELWKESGRWEFYGKELLRFNDRKDAEFCMGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ SY KM+ + Sbjct: 121 EVRSYRQLPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVNEAGADVSYEKMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CS 224 Y RIF R GLK + A++G IGG SHEF+VLAD+GE + CS Sbjct: 181 YRRIFERCGLKFRAVEADTGTIGGSYSHEFMVLADSGEDAIVSCS 225 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 77/178 (43%), Positives = 109/178 (61%), Gaps = 3/178 (1%) Query: 261 DVHNEKLFDSLPE---NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N + D+ P K RGIEVGH+F GTKYS + ATF ADGK+ + MG Y Sbjct: 383 DIRNVVIGDACPRCDSGKLEIWRGIEVGHVFKLGTKYSKALKATFLDADGKEQIIFMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R VAA IE +HD GII+P +APF+ + ++ A + + A E IY L + G Sbjct: 443 GIGVGRTVAACIEQNHDENGIIFPIPIAPFQCIISSLSAKEDEVKAASESIYQELLEAGI 502 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +V DD E+ G +F ADL+G PL+++VG+K +++ KVE+K R +G E + + E I Sbjct: 503 EVLLDDRDERPGFKFKDADLIGIPLRIVVGAKALAEGKVELKERRSGEVEVLPIAEAI 560 >gi|303248073|ref|ZP_07334338.1| prolyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] gi|302490472|gb|EFL50380.1| prolyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] Length = 575 Score = 283 bits (723), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 133/231 (57%), Positives = 172/231 (74%), Gaps = 3/231 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y+ P L+E P +AE+ SHKL+LR GMI + + GIY++LPLG KAL+NV I+REE Sbjct: 1 MRLSRYYAPTLKETPAEAEVVSHKLLLRAGMIRKLTAGIYTYLPLGLKALNNVARIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q ADLW ESGR++ YG+E+LR DR+++ GPTHEEV+TD+ R Sbjct: 61 MDRAGALEILMPAVQPADLWKESGRWEFYGRELLRFVDRHEREFCLGPTHEEVVTDLVRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G+ SY M+ + Sbjct: 121 EIRSYRQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDKDDAGADASYWAMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDF 230 Y+RIF RLGLK + A+SG IGG SHEF+VLA+TGE T +C D DF Sbjct: 181 YIRIFERLGLKFRAVSADSGAIGGSFSHEFMVLAETGEDTIAYC--DACDF 229 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/154 (42%), Positives = 101/154 (65%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVGH+F G KYS ++ATF GK+ ++ MG YGIG R+VAA IE ++D GI Sbjct: 402 AKGIEVGHVFKLGLKYSKSLNATFLDEAGKEQFMIMGCYGIGVSRIVAACIEQNNDASGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 ++P ++APF+++L+N+ A D +++Y L+ G + DD E+ GS+F ADL+ Sbjct: 462 VFPPAIAPFEVALLNLNAKDAEASAKADELYDALTAAGIETLLDDREERPGSKFKDADLM 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 GFP+Q+ +G K ++ VE K R TG + ++ L+ Sbjct: 522 GFPIQLTLGGKGLARGIVETKDRRTGEKGELPLD 555 >gi|317154070|ref|YP_004122118.1| prolyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316944321|gb|ADU63372.1| prolyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 579 Score = 283 bits (723), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 127/225 (56%), Positives = 171/225 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y++P L+E+P DAE+ SHKL++R GMI + + GIY++LPLG ++++ V I+REE Sbjct: 1 MRLSRYYIPTLKEDPADAEVVSHKLLMRAGMIRKLTSGIYNYLPLGLRSINKVARIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+S+P +Q ADLW E+GR+D YGKE+LRL DR+ + GPTHEEV+TD+ R Sbjct: 61 MDRAGAMEVSMPMVQPADLWQETGRWDYYGKELLRLKDRHGRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSFD G++ SY MF + Sbjct: 121 EIKSYKQLPINLYQVQTKFRDEIRPRFGLMRGREFIMKDAYSFDRDEAGAETSYWAMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y F R+GL+ P++A+SG IGGD SHEF+VLADTGE + K Sbjct: 181 YKAAFSRIGLRFKPVQADSGAIGGDFSHEFMVLADTGEDTIASCK 225 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 63/145 (43%), Positives = 92/145 (63%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGH+F G KYS M ATF +GK Y+ MG YGIG R+VA+ IE ++D G Sbjct: 406 KGIEVGHVFKLGLKYSKKMEATFLDENGKTQYMVMGCYGIGVSRIVASAIEQNNDEAGCC 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P S+APF+ LI++ D+ ++Y +L +G D +DD E+ G +FA ADL+G Sbjct: 466 FPPSIAPFEAVLISLGGKDEAVDAKAAELYEQLRVLGVDACFDDRKERPGVKFAEADLIG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTG 424 +P+Q+++G K ++ VE K R TG Sbjct: 526 YPMQLVLGGKGLASGIVEAKDRKTG 550 >gi|78222566|ref|YP_384313.1| prolyl-tRNA synthetase [Geobacter metallireducens GS-15] gi|114152198|sp|Q39VY6|SYP_GEOMG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78193821|gb|ABB31588.1| Prolyl-tRNA synthetase [Geobacter metallireducens GS-15] Length = 570 Score = 283 bits (723), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 126/221 (57%), Positives = 166/221 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P ++E P DAE+ SHKLMLR GMI + + GIY++LPLG +++ V I+REE Sbjct: 1 MRYSQYFIPTVKETPSDAEVVSHKLMLRAGMIRKLAAGIYNYLPLGLRSIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P++Q A+LW ES R++ YGKE+LR DR D GPTHEEV+TD+ R Sbjct: 61 MNRAGAIELLMPSVQPAELWQESKRWEQYGKELLRFKDRKDAEFCLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSFD++ E + SY+KM+ + Sbjct: 121 EVKSYRQLPLNLYQVQSKFRDEIRPRFGLMRGREFIMKDAYSFDVSSEAADTSYDKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R GLK + A++G IGG SHEF+VLAD+GE + Sbjct: 181 YRRIFQRCGLKFRAVEADTGSIGGSSSHEFMVLADSGEDAI 221 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 73/157 (46%), Positives = 100/157 (63%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F GTKYS + ATF ADGK+ + MG YGIG R VAA IE +HD GII Sbjct: 402 RGIEVGHVFKLGTKYSESLRATFLDADGKEQVIFMGCYGIGISRTVAACIEQNHDADGII 461 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +APF + + D AC+++Y L+ VG +V +DD E+ GS+F ADL+G Sbjct: 462 FPIPIAPFHCIISAVSTKDAEVVAACDELYRALTAVGVEVLFDDRDERPGSKFKDADLIG 521 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 PL+++VGSK +++ KVE+K R G + L E + Sbjct: 522 IPLRIVVGSKNLAEGKVELKSRKGGEVSLLPLAEAVE 558 >gi|283850295|ref|ZP_06367584.1| prolyl-tRNA synthetase [Desulfovibrio sp. FW1012B] gi|283574321|gb|EFC22292.1| prolyl-tRNA synthetase [Desulfovibrio sp. FW1012B] Length = 575 Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 131/224 (58%), Positives = 169/224 (75%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y+ P L+E+P +AE+ SHKL+LR GMI + + GIY++LPLG +A++NV I+REE Sbjct: 1 MRLSRYYAPTLKESPAEAEVISHKLLLRAGMIRKLTAGIYTYLPLGLRAVNNVARIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q ADLW ESGR+D YG+E+LR DR+D+ GPTHEEV+TD+ R Sbjct: 61 MDRAGALEILMPAVQPADLWKESGRWDFYGRELLRFVDRHDRESCLGPTHEEVVTDLVRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSFD G+ SY MF + Sbjct: 121 EIRSYRQLPVNLYQVQTKFRDEIRPRFGLMRGREFVMKDAYSFDKDDAGADASYKSMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y RIF RLGLK + A+SG IGG SHEF+VLA+TGE T V C Sbjct: 181 YARIFTRLGLKFRAVSADSGAIGGSFSHEFMVLAETGEDTIVAC 224 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 67/153 (43%), Positives = 98/153 (64%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGH+F G KYS +SATF GK+ ++ MG YGIG R+VAA IE ++D GI+ Sbjct: 403 KGIEVGHVFKLGLKYSKALSATFLDEAGKEQFMIMGCYGIGVSRIVAACIEQNNDASGIV 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +APF+ +LIN+ D+ ++IYA L+K G + DD E+ G +F ADL+G Sbjct: 463 FPPPIAPFEAALINLSPKDETASAKADEIYAALTKAGVETLLDDRDERPGVKFKDADLIG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 P+Q+ +G K ++ VE K R TG + ++ LE Sbjct: 523 LPIQLTLGGKGLARGIVETKDRRTGEKGELPLE 555 >gi|161525965|ref|YP_001580977.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189349316|ref|YP_001944944.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|221202408|ref|ZP_03575440.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2M] gi|221208132|ref|ZP_03581137.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221213248|ref|ZP_03586223.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD1] gi|226699126|sp|A9AI56|SYP_BURM1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160343394|gb|ABX16480.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189333338|dbj|BAG42408.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|221166700|gb|EED99171.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD1] gi|221172035|gb|EEE04477.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221177685|gb|EEE10100.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2M] Length = 578 Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 130/224 (58%), Positives = 170/224 (75%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAVELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD EG + SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAEGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +C Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYC 224 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 74/171 (43%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRNVKKGDPSPDGKGAIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGIIWP+S+APF++ L + +D+ R+A +K+YA Sbjct: 442 LMGCYGIGVTRILGAAIEQNFDDKGIIWPESIAPFEVVLCPM-GYDRSDAVREAADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 501 ELTAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 551 >gi|114152266|sp|Q2LTR7|SYP_SYNAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 578 Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 136/225 (60%), Positives = 166/225 (73%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP +E P DAE+ SH+LMLR GMI + S GIYS+LPLG + L V IIREE Sbjct: 1 MRYSEMFLPTEREIPSDAEVVSHQLMLRAGMIRKLSAGIYSYLPLGYRVLRKVEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q A+LW ESGR++ YGKE+LR DR+D+ GPTHEEV+TD+ R Sbjct: 61 MNRAGAQEVYLPMVQPAELWQESGRWEHYGKELLRFRDRHDREYCLGPTHEEVITDLVRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IK+YR LP YQIQ KFRDE+RPRFGVMR REF MKDAYSFD EG++ SY KMF + Sbjct: 121 EIKTYRQLPKNLYQIQTKFRDEIRPRFGVMRGREFGMKDAYSFDADEEGAEISYQKMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 Y RIF R GL+ P+ A+SG IGG SHEF+V+AD+GE VFC+ Sbjct: 181 YKRIFARCGLRFRPVEADSGTIGGSFSHEFMVMADSGEDGLVFCA 225 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/180 (38%), Positives = 110/180 (61%), Gaps = 2/180 (1%) Query: 257 AATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 +A +D+ + DS P + ARGIEVGH+F GTKYS M A++ +GK+ + M Sbjct: 380 SAFADLKVARETDSCPRCQGALKFARGIEVGHVFKLGTKYSKAMGASYLDKNGKEQIMIM 439 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R VAA IE +HD GI+WP ++P+++ + + +D+ + E++Y L+ Sbjct: 440 GCYGIGTGRTVAACIEQNHDENGIVWPMPISPYQVIITPVNMNDKALAETAERLYESLAG 499 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G +F ADL+G P++V VG K +++ KVE++ R TG D+ ++ V Sbjct: 500 KGAEVLLDDRDERAGVKFKDADLIGIPIRVTVGPKKLAEGKVEVRLRDTGETSDVQVDSV 559 >gi|85859447|ref|YP_461649.1| prolyl-tRNA synthetase [Syntrophus aciditrophicus SB] gi|85722538|gb|ABC77481.1| prolyl-tRNA synthetase [Syntrophus aciditrophicus SB] Length = 597 Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 136/225 (60%), Positives = 166/225 (73%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP +E P DAE+ SH+LMLR GMI + S GIYS+LPLG + L V IIREE Sbjct: 20 MRYSEMFLPTEREIPSDAEVVSHQLMLRAGMIRKLSAGIYSYLPLGYRVLRKVEQIIREE 79 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q A+LW ESGR++ YGKE+LR DR+D+ GPTHEEV+TD+ R Sbjct: 80 MNRAGAQEVYLPMVQPAELWQESGRWEHYGKELLRFRDRHDREYCLGPTHEEVITDLVRH 139 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IK+YR LP YQIQ KFRDE+RPRFGVMR REF MKDAYSFD EG++ SY KMF + Sbjct: 140 EIKTYRQLPKNLYQIQTKFRDEIRPRFGVMRGREFGMKDAYSFDADEEGAEISYQKMFEA 199 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 Y RIF R GL+ P+ A+SG IGG SHEF+V+AD+GE VFC+ Sbjct: 200 YKRIFARCGLRFRPVEADSGTIGGSFSHEFMVMADSGEDGLVFCA 244 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 70/180 (38%), Positives = 110/180 (61%), Gaps = 2/180 (1%) Query: 257 AATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 +A +D+ + DS P + ARGIEVGH+F GTKYS M A++ +GK+ + M Sbjct: 399 SAFADLKVARETDSCPRCQGALKFARGIEVGHVFKLGTKYSKAMGASYLDKNGKEQIMIM 458 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R VAA IE +HD GI+WP ++P+++ + + +D+ + E++Y L+ Sbjct: 459 GCYGIGTGRTVAACIEQNHDENGIVWPMPISPYQVIITPVNMNDKALAETAERLYESLAG 518 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G +F ADL+G P++V VG K +++ KVE++ R TG D+ ++ V Sbjct: 519 KGAEVLLDDRDERAGVKFKDADLIGIPIRVTVGPKKLAEGKVEVRLRDTGETSDVQVDSV 578 >gi|167564170|ref|ZP_02357086.1| prolyl-tRNA synthetase [Burkholderia oklahomensis EO147] gi|167571291|ref|ZP_02364165.1| prolyl-tRNA synthetase [Burkholderia oklahomensis C6786] Length = 578 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 132/229 (57%), Positives = 172/229 (75%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNDFVIGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REFLMKDAYSFD EG K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFLMKDAYSFDRDHEGLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+R+F R+GL+ P+ A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 YVRVFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 229 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVIADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSEAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGIIWP+++APF++ L + +D+ R+A +++YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIIWPEAIAPFEVVLCPM-GYDRSDAVREAADQLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D KVE + R Sbjct: 501 ALAAAGVDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKVEYQGR 551 >gi|325528042|gb|EGD05262.1| prolyl-tRNA synthetase [Burkholderia sp. TJI49] Length = 578 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 130/224 (58%), Positives = 169/224 (75%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGALELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD EG SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAEGLNESYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +C Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYC 224 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 76/171 (44%), Positives = 104/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGIIWP+S+APF++ L + +D+ R+A +K+YA Sbjct: 442 LMGCYGIGVTRILGAAIEQNFDDKGIIWPESIAPFEVVLCPM-GYDRSDAVREAADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 LS G DV DD GE+ G FA +L+G P +V++G + + + K+E + R Sbjct: 501 ELSAAGIDVILDDRGERPGVMFADWELIGVPHRVVIGERGLKEGKIEYQGR 551 >gi|115350544|ref|YP_772383.1| prolyl-tRNA synthetase [Burkholderia ambifaria AMMD] gi|122324080|sp|Q0BIH4|SYP_BURCM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|115280532|gb|ABI86049.1| prolyl-tRNA synthetase [Burkholderia ambifaria AMMD] Length = 578 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 133/229 (58%), Positives = 171/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REFLMKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFLMKDAYSFDKDTAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPTSDF 229 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 104/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV + K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRDVKKGDPSPDGKGTIDICRGIEVGHVFQLGTKYSDAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YG+G R++ A IE + D KGIIWP+S+APF++ L + +D+ + R+A +K+YA Sbjct: 442 LMGCYGVGITRILGAAIEQNFDDKGIIWPESIAPFEVVLCPM-GYDRSDMVREAADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + + K+E + R Sbjct: 501 ELAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGR 551 >gi|170699968|ref|ZP_02890995.1| prolyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] gi|170135116|gb|EDT03417.1| prolyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] Length = 578 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 132/229 (57%), Positives = 171/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDTAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPTSDF 229 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 103/167 (61%), Gaps = 5/167 (2%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +DV + K D P+ K RGIEVGH+F GTKYS M ATF GK + MG Sbjct: 386 VADVRDVKKGDPSPDGKGTIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPMLMGC 445 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYARLSK 374 YG+G R++ A IE + D KGIIWP+S+APF++ L + +D+ + R+A +K+YA L+ Sbjct: 446 YGVGVTRILGAAIEQNFDDKGIIWPESIAPFEVVLCPM-GYDRSDMVREAADKLYAELAA 504 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD GE+ G FA +L+G P ++++G + + + K+E + R Sbjct: 505 AGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGR 551 >gi|167842004|ref|ZP_02468688.1| prolyl-tRNA synthetase [Burkholderia thailandensis MSMB43] Length = 578 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 132/229 (57%), Positives = 171/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MRASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFSRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 229 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 102/171 (59%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVIADVRNVKAGDPSPDGKGVLDICRGIEVGHVFQLGTKYSDAMGATFIDESGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGI+WP+++APF++ L + +D+ R+A + +YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPM-GYDRSDAVREAADTLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 501 DLVAAGVDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 551 >gi|39996560|ref|NP_952511.1| prolyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|81832056|sp|Q74D59|SYP_GEOSL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|39983441|gb|AAR34834.1| prolyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|298505576|gb|ADI84299.1| prolyl-tRNA synthetase [Geobacter sulfurreducens KN400] Length = 570 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 127/226 (56%), Positives = 167/226 (73%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + YF+P L+E P DAE+ SH+LMLR GMI + + GIY++LPLG +++ V I+REE Sbjct: 1 MRYTNYFIPTLKETPSDAEVVSHQLMLRAGMIRKLAAGIYNYLPLGLRSIRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +P++Q A+LW ES R++ YGKE+LR DR D GPTHEEV+TDI R Sbjct: 61 MDRAGAIELLMPSVQPAELWQESTRWEQYGKELLRFKDRKDAEFCLGPTHEEVVTDIVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR +PF YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ S SY+KM+ + Sbjct: 121 EVKSYRQMPFNLYQIQAKFRDEIRPRFGLMRGREFIMKDAYSFDVDSSASDLSYDKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSK 225 Y RIF R GLK + A++G IGG SHEF+VLAD+GE + C++ Sbjct: 181 YRRIFQRCGLKFRAVEADTGSIGGSSSHEFMVLADSGEDAIVSCTQ 226 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 73/152 (48%), Positives = 96/152 (63%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F GTKYS + AT+ ADGK+ + MG YGIG R VAA IE +HD GII Sbjct: 402 RGIEVGHVFKLGTKYSEALRATYLDADGKEQIIFMGCYGIGISRTVAACIEQNHDADGII 461 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +APF + + D ACE +Y L G +V +DD E+ G +F ADL+G Sbjct: 462 FPIPIAPFHCIVSAVNTKDAEVMAACESLYLDLRAAGVEVLFDDRDERPGIKFKDADLIG 521 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 PL+++VGSK ++D KVE+K R TG E + L Sbjct: 522 IPLRLVVGSKNLADGKVELKSRRTGEVELLPL 553 >gi|294634711|ref|ZP_06713243.1| proline--tRNA ligase [Edwardsiella tarda ATCC 23685] gi|291091887|gb|EFE24448.1| proline--tRNA ligase [Edwardsiella tarda ATCC 23685] Length = 572 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 127/226 (56%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLNKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNYAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSTD 226 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 67/156 (42%), Positives = 104/156 (66%), Gaps = 1/156 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKY+ ++AT +G DG++ + MG YGIG RVVAA IE +HD +GII Sbjct: 407 RGIEVGHIFQLGTKYTEALNATVQGEDGRNQLMTMGCYGIGVTRVVAAAIEQNHDERGII 466 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H +D E++Y L G +V DD E+ G FA +L+ Sbjct: 467 WPDAIAPFQVAILPMNMHKSFRVKDVAERLYDALRLKGIEVLLDDRKERPGVMFADMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P +++G + + +++VE K+R G + +SL+E+ Sbjct: 527 GIPYTIVIGDRNLDNNEVEYKYRRDGEKLMISLDEI 562 >gi|171316236|ref|ZP_02905459.1| prolyl-tRNA synthetase [Burkholderia ambifaria MEX-5] gi|171098650|gb|EDT43447.1| prolyl-tRNA synthetase [Burkholderia ambifaria MEX-5] Length = 578 Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 132/229 (57%), Positives = 171/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDTAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPTSDF 229 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/171 (40%), Positives = 104/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV + K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRDVKKGDPSPDGKGTIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YG+G R++ A IE + D +GIIWP+S+APF++ L + +D+ + R+A +K+YA Sbjct: 442 LMGCYGVGVTRILGAAIEQNFDDRGIIWPESIAPFEVVLCPM-GYDRSDMVREAADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + + K+E + R Sbjct: 501 ELTAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGR 551 >gi|120602767|ref|YP_967167.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris DP4] gi|152112308|sp|A1VE74|SYP_DESVV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120562996|gb|ABM28740.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris DP4] Length = 574 Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 128/225 (56%), Positives = 166/225 (73%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P L+E P DAE+ SHKL++R GMI + + GIY+++P+G +AL+ V AI+REE Sbjct: 1 MRWSRCYIPTLKEAPSDAEVVSHKLLVRAGMIRKLTSGIYTFMPMGLRALNKVAAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q ADLW E+GR++ YGKE+LR DRND+ GPTHEEV+TD+ R Sbjct: 61 MNRAGAQEVLMPMVQPADLWQETGRWEFYGKELLRFRDRNDRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G SY M+ + Sbjct: 121 EVRSYRQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDRDQAGCDESYKAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 Y RIF RLGL+ + A+SG IGG SHEF+VLADTGE T C+ Sbjct: 181 YQRIFSRLGLRFRAVEADSGSIGGSFSHEFMVLADTGEDTLAVCT 225 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 61/153 (39%), Positives = 97/153 (63%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGH+F G KYS M+ATF +GK+ + MG YGIG RVVA+ IE ++DG GI+ Sbjct: 403 KGIEVGHVFKLGLKYSKSMNATFLDENGKEQVMVMGCYGIGVSRVVASCIEQNNDGDGIV 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +AP++++L+ + ++ +I + L G DV DD E+ G +F ADL+G Sbjct: 463 FPPPIAPYEVALLLLDPKNEEAAAKAAEIESFLEAEGHDVLLDDRDERPGVKFKDADLIG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 P Q+++G K ++ VE K+R +G + ++ +E Sbjct: 523 SPYQLVLGGKGLARGVVEAKNRRSGEKTELPVE 555 >gi|46579756|ref|YP_010564.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|81830448|sp|Q72CD8|SYP_DESVH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|46449171|gb|AAS95823.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|311233547|gb|ADP86401.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris RCH1] Length = 574 Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 128/225 (56%), Positives = 166/225 (73%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P L+E P DAE+ SHKL++R GMI + + GIY+++P+G +AL+ V AI+REE Sbjct: 1 MRWSRCYIPTLKEAPSDAEVVSHKLLVRAGMIRKLTSGIYTFMPMGLRALNKVAAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q ADLW E+GR++ YGKE+LR DRND+ GPTHEEV+TD+ R Sbjct: 61 MNRAGAQEVLMPMVQPADLWQETGRWEFYGKELLRFRDRNDRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G SY M+ + Sbjct: 121 EVRSYRQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDRDQSGCDESYKAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 Y RIF RLGL+ + A+SG IGG SHEF+VLADTGE T C+ Sbjct: 181 YQRIFSRLGLRFRAVEADSGSIGGSFSHEFMVLADTGEDTLAVCT 225 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 61/153 (39%), Positives = 97/153 (63%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGH+F G KYS M+ATF +GK+ + MG YGIG RVVA+ IE ++DG GI+ Sbjct: 403 KGIEVGHVFKLGLKYSKSMNATFLDENGKEQVMVMGCYGIGVSRVVASCIEQNNDGDGIV 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +AP++++L+ + ++ +I + L G DV DD E+ G +F ADL+G Sbjct: 463 FPPPIAPYEVALLLLDPKNEEAAAKAAEIESFLEAEGHDVLLDDRDERPGVKFKDADLIG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 P Q+++G K ++ VE K+R +G + ++ +E Sbjct: 523 SPYQLVLGGKGLARGVVEAKNRRSGEKTELPVE 555 >gi|134294675|ref|YP_001118410.1| prolyl-tRNA synthetase [Burkholderia vietnamiensis G4] gi|166980110|sp|A4JBC2|SYP_BURVG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|134137832|gb|ABO53575.1| prolyl-tRNA synthetase [Burkholderia vietnamiensis G4] Length = 578 Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 130/224 (58%), Positives = 168/224 (75%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGALELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REFLMKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFLMKDAYSFDKDAAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +C Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYC 224 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/170 (43%), Positives = 103/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPDVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YG+G R++ A IE + D KGIIWP+S+APF++ L + ++ R+A +K+YA Sbjct: 442 LMGCYGVGVTRILGAAIEQNFDDKGIIWPESIAPFELVLCPMGYDRSEMVREAADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D KVE + R Sbjct: 502 LTAAGVDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKVEYQGR 551 >gi|206561773|ref|YP_002232538.1| prolyl-tRNA synthetase [Burkholderia cenocepacia J2315] gi|226699125|sp|B4E5W6|SYP_BURCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|198037815|emb|CAR53759.1| prolyl-tRNA synthetase [Burkholderia cenocepacia J2315] Length = 578 Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 130/224 (58%), Positives = 168/224 (75%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +C Sbjct: 181 YVRIFSRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYC 224 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPDVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YG+G R++ A IE + D +GIIWP+S+APF++ L + +D+ + R+ +K+YA Sbjct: 442 LMGCYGVGITRILGAAIEQNFDDRGIIWPESIAPFEVVLCPM-GYDRSDLVRETADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G FA +L+G P ++++G + + + K+E + R Sbjct: 501 ELVAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGR 551 >gi|317484633|ref|ZP_07943536.1| prolyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] gi|316924107|gb|EFV45290.1| prolyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] Length = 574 Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 127/225 (56%), Positives = 169/225 (75%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++++P L+E P DAE+ SHKL++R GMI + + GIY+WLPLG + L+ I+REE Sbjct: 1 MRWSQWYIPTLKEAPGDAEVISHKLLIRAGMIRKLTSGIYTWLPLGLRTLNKAANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +PT+Q ADLW ESGR++ YGKE+LR DR+++ GPTHEEV+TD+ R Sbjct: 61 MDRAGAQEILMPTVQPADLWRESGRWEHYGKELLRFKDRHERDYCLGPTHEEVVTDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REFLMKDAYSFD G+ SY KMF + Sbjct: 121 EVRSYRQLPMNLYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFDRDDAGADISYKKMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 Y +IF R+ L+ P+ A+SG IGG+ SHEF+VLA+TGE T +C+ Sbjct: 181 YKKIFSRMALQFRPVEADSGSIGGNFSHEFMVLAETGEDTIAYCT 225 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 73/180 (40%), Positives = 111/180 (61%), Gaps = 2/180 (1%) Query: 255 PYAATSDVHNEKLFDSLPE-NKRVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ + D P K V+ A+GIEVGH+F GTKYS ++A + +GK+ + Sbjct: 376 PAFAYADLRSIAEGDVCPRCGKPVAFAKGIEVGHVFKLGTKYSTALNAIYLDENGKEQTI 435 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE ++DG GI +P +APF + L+N+ + +++Y L Sbjct: 436 IMGCYGIGVSRVVAACIEQNNDGDGIAFPPPLAPFDLELLNLDPKNADTAAKADELYDLL 495 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + +G DV DD E+ G +F ADL+G P+QV+VG K ++ VE+K+R TG + ++ +E Sbjct: 496 TGMGLDVLLDDREERPGVKFKDADLVGLPMQVVVGGKGLARGIVEVKNRKTGEKGELPVE 555 >gi|254253311|ref|ZP_04946629.1| Prolyl-tRNA synthetase [Burkholderia dolosa AUO158] gi|124895920|gb|EAY69800.1| Prolyl-tRNA synthetase [Burkholderia dolosa AUO158] Length = 578 Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 132/229 (57%), Positives = 171/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLDESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPTSDF 229 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 74/171 (43%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPDVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YG+G R++ A IE + D KGIIWP+S+APF++ L + +D+ R+A +K+YA Sbjct: 442 LMGCYGVGITRILGAAIEQNFDDKGIIWPESIAPFEVVLCPM-GYDRSDAVREAADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G FA +L+G P +V++G + + + K+E + R Sbjct: 501 ELVAAGIDVILDDRGERPGVMFADWELIGVPHRVVIGERGLKEGKIEYQGR 551 >gi|172059576|ref|YP_001807228.1| prolyl-tRNA synthetase [Burkholderia ambifaria MC40-6] gi|226699123|sp|B1YSV1|SYP_BURA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|171992093|gb|ACB63012.1| prolyl-tRNA synthetase [Burkholderia ambifaria MC40-6] Length = 578 Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 132/229 (57%), Positives = 171/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDTAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPTSDF 229 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/171 (40%), Positives = 104/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV + K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRDVKKGDPSPDGKGTIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YG+G R++ A IE + D +GIIWP+S+APF++ L + +D+ + R+A +K+YA Sbjct: 442 LMGCYGVGVTRILGAAIEQNFDDRGIIWPESIAPFEVVLCPM-GYDRSDMVREAADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + + K+E + R Sbjct: 501 ELAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGR 551 >gi|148264838|ref|YP_001231544.1| prolyl-tRNA synthetase [Geobacter uraniireducens Rf4] gi|146398338|gb|ABQ26971.1| prolyl-tRNA synthetase [Geobacter uraniireducens Rf4] Length = 585 Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 124/221 (56%), Positives = 166/221 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P ++E P DAE+ SH+LMLR GMI + + G+Y++LPLG +++ V I+REE Sbjct: 15 MRYSQYFIPTVKETPSDAEVISHQLMLRAGMIRKLAAGVYNYLPLGLRSIRKVENIVREE 74 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +PT+Q A+LW ESGR++ YGKE+LR DR D GPTHEEV+TD+ R Sbjct: 75 MNRAGAIELLMPTVQPAELWQESGRWEQYGKELLRFKDRKDTEFCMGPTHEEVITDLVRR 134 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ + + SY+KM+ + Sbjct: 135 EVKSYRQLPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVNEKAADISYDKMYQA 194 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R GL+ + A++G IGG SHEF+VLA++GE + Sbjct: 195 YRRIFERCGLRFRAVEADTGSIGGSYSHEFMVLAESGEDAI 235 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 80/179 (44%), Positives = 112/179 (62%), Gaps = 3/179 (1%) Query: 260 SDVHNEKLFDSLPENKRVSA---RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N L D P + RGIEVGH+F GTKYS M AT+ ADGK+ + MG Sbjct: 394 ADIRNVVLGDPCPRCDSGTLEMWRGIEVGHVFKLGTKYSKAMKATYLDADGKEQIIFMGC 453 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R VAA IE +HD GII+P +APF + + ++ RD+ E IYA+L+ G Sbjct: 454 YGIGIGRTVAACIEQNHDDNGIIFPLPIAPFHCIISALNMKEEPVRDSSEAIYAQLAAAG 513 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +V DD E+ G +F ADL+G PL+++VGSK ++D KVE+K+R TG E +S+ + + Sbjct: 514 VEVLLDDRDERPGFKFKDADLIGIPLRIVVGSKNLADGKVELKNRKTGDVELLSIADAV 572 >gi|107021665|ref|YP_619992.1| prolyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] gi|123072438|sp|Q1BZD6|SYP_BURCA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|105891854|gb|ABF75019.1| prolyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] Length = 578 Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 130/224 (58%), Positives = 168/224 (75%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +C Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYC 224 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YG+G R++ A IE + D KGIIWP+S+APF++ L + +D+ + R+ +K+YA Sbjct: 442 LMGCYGVGITRILGAAIEQNFDDKGIIWPESIAPFEVVLCPM-GYDRSDMVRETADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G FA +L+G P ++++G + + + K+E + R Sbjct: 501 ELVAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGR 551 >gi|29653442|ref|NP_819134.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 493] gi|81839111|sp|Q83F67|SYP_COXBU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|29540704|gb|AAO89648.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 493] Length = 566 Score = 279 bits (713), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 128/226 (56%), Positives = 167/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM+ + + G+Y+WLPLG + L V ++REE Sbjct: 3 MKVSQFFLATVKETPADAVLASHQLMIRAGMLRKLASGLYTWLPLGLRVLQKVADVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 63 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 123 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S + Sbjct: 183 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDE 228 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 128/240 (53%), Gaps = 17/240 (7%) Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 GP+ +L FIV D + +DF + DF I ++ + P + Sbjct: 338 GPV--NLPIPFIVDRDAAQ--------LVDFSCGANEDDFHWI----NVNWERDVPLGSV 383 Query: 260 SDVHNEKLFDSLPENK-RVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ D P+ K R+ ARGIEVG +F G KYS M+AT GK Y+QMG Y Sbjct: 384 ADIRKVVEGDISPDGKGRLRFARGIEVGQVFQLGDKYSRKMNATVVDELGKSRYLQMGCY 443 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG R VAA IE +HD +GIIWP +APF I+L+ + H R+ACEK+Y L G Sbjct: 444 GIGVSRTVAAAIEQNHDERGIIWPMPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V WDD E+ G FA DL+G P ++++ + VE K R + E++SLE V++ Sbjct: 504 YEVLWDDRKERPGVMFADMDLIGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLS 563 >gi|189083494|sp|A9KGU5|SYP_COXBN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 564 Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 128/226 (56%), Positives = 167/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM+ + + G+Y+WLPLG + L V ++REE Sbjct: 1 MKVSQFFLATVKETPADAVLASHQLMIRAGMLRKLASGLYTWLPLGLRVLQKVADVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 61 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 121 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S + Sbjct: 181 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDE 226 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 128/240 (53%), Gaps = 17/240 (7%) Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 GP+ +L FIV D + +DF + DF I ++ + P + Sbjct: 336 GPV--NLPIPFIVDRDAAQ--------LVDFSCGANEDDFHWI----NVNWERDVPLGSV 381 Query: 260 SDVHNEKLFDSLPENK-RVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ D P+ K R+ ARGIEVG +F G KYS M+AT GK Y+QMG Y Sbjct: 382 ADIRKVVEGDISPDGKGRLRFARGIEVGQVFQLGDKYSRKMNATVVDELGKSRYLQMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG R VAA IE +HD +GIIWP +APF I+L+ + H R+ACEK+Y L G Sbjct: 442 GIGVSRTVAAAIEQNHDERGIIWPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAG 501 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V WDD E+ G FA DL+G P ++++ + VE K R + E++SLE V++ Sbjct: 502 YEVLWDDRKERPGVMFADMDLIGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLS 561 >gi|116688611|ref|YP_834234.1| prolyl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|170731910|ref|YP_001763857.1| prolyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] gi|152016591|sp|A0K4B4|SYP_BURCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226699124|sp|B1JVA5|SYP_BURCC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116646700|gb|ABK07341.1| prolyl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|169815152|gb|ACA89735.1| prolyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] Length = 578 Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 130/224 (58%), Positives = 168/224 (75%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +C Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYC 224 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YG+G R++ A IE + D KGIIWP+S+APF++ L + +D+ + R+ +K+YA Sbjct: 442 LMGCYGVGITRILGAAIEQNFDDKGIIWPESIAPFEVVLCPM-GYDRSDMVRETADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G FA +L+G P ++++G + + + K+E + R Sbjct: 501 ELVAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGR 551 >gi|212213390|ref|YP_002304326.1| prolyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] gi|212011800|gb|ACJ19181.1| prolyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] Length = 566 Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 128/226 (56%), Positives = 167/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM+ + + G+Y+WLPLG + L V ++REE Sbjct: 3 MKVSQFFLATVKETPADAVLASHQLMIRAGMLRKLASGLYTWLPLGLRVLQKVADVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 63 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 123 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S + Sbjct: 183 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDE 228 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 84/216 (38%), Positives = 119/216 (55%), Gaps = 7/216 (3%) Query: 224 SKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK-RVS-ARG 281 + +DF + DF I ++ + P + +D+ D P+ K R+ ARG Sbjct: 352 AAQLVDFSCGANEDDFHWI----NVNWERDVPLGSVADIRKVVEGDISPDGKGRLRFARG 407 Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVG +F G KYS M+AT GK Y+QMG YGIG R VAA IE +HD +GIIWP Sbjct: 408 IEVGQVFQLGDKYSRQMNATVVDELGKSRYLQMGCYGIGVSRTVAAAIEQNHDERGIIWP 467 Query: 342 DSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 +APF I+L+ + H R+ACEK+Y L G +V WDD E+ G FA DL+G Sbjct: 468 TPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDLIGI 527 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 P ++++ + VE K R + E++SLE V++ Sbjct: 528 PHRLVISESGLDRGIVEYKARKSKEAENVSLENVLS 563 >gi|161829880|ref|YP_001596051.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 331] gi|189083495|sp|A9N9Z2|SYP_COXBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|161761747|gb|ABX77389.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 331] Length = 564 Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 128/226 (56%), Positives = 167/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM+ + + G+Y+WLPLG + L V ++REE Sbjct: 1 MKVSQFFLATVKETPADAVLASHQLMIRAGMLRKLASGLYTWLPLGLRVLQKVADVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 61 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 121 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S + Sbjct: 181 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDE 226 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 128/240 (53%), Gaps = 17/240 (7%) Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 GP+ +L FIV D + +DF + DF I ++ + P + Sbjct: 336 GPV--NLPIPFIVDRDAAQ--------LVDFSCGANEDDFHWI----NVNWERDVPLGSV 381 Query: 260 SDVHNEKLFDSLPENK-RVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ D P+ K R+ ARGIEVG +F G KYS M+AT GK Y+QMG Y Sbjct: 382 ADIRKVVEGDISPDGKGRLRFARGIEVGQVFQLGDKYSRKMNATVVDELGKSRYLQMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG R VAA IE +HD +GIIWP +APF I+L+ + H R+ACEK+Y L G Sbjct: 442 GIGVSRTVAAAIEQNHDERGIIWPMPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAG 501 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V WDD E+ G FA DL+G P ++++ + VE K R + E++SLE V++ Sbjct: 502 YEVLWDDRKERPGVMFADMDLIGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLS 561 >gi|256828741|ref|YP_003157469.1| prolyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] gi|256577917|gb|ACU89053.1| prolyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] Length = 580 Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 129/225 (57%), Positives = 167/225 (74%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK+++P L+E P +AE+ SHKL+LR GMI + + GIY+++PLG +A++ V I+REE Sbjct: 1 MLFSKFYVPTLKETPAEAEVISHKLLLRAGMIRKLTSGIYTYMPLGLRAINKVANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+S+P +Q ADLW ESGR+D YGKE+LRL DR+ + GPTHEEV+TD+ R Sbjct: 61 MNRAGAQEISMPMVQPADLWQESGRWDFYGKELLRLKDRHGRDYCLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD EG SY M+ + Sbjct: 121 EVRSYRQLPINLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDKDDEGVNASYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 Y R+F RLGL+ + A+SG IGG SHEF+VLADTGE T C+ Sbjct: 181 YTRVFTRLGLEFRAVSADSGAIGGSFSHEFMVLADTGEDTLAVCT 225 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 100/157 (63%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGH+F GTKYS M+ATF +GK+ + MG YGIG RVVAA IE ++D G+I Sbjct: 408 KGIEVGHVFKLGTKYSKSMNATFLDENGKEQVIIMGCYGIGVSRVVAACIEQNNDANGMI 467 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P S+APF+I+++ + D+ +I+ L G D +DD E+ G +F ADLLG Sbjct: 468 FPPSIAPFEITILAMSTKDEKVMAKGREIHDWLESQGIDTLFDDRDERPGVKFNEADLLG 527 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 P+Q+++G K + +E+K+R TG + ++ + + N Sbjct: 528 SPMQIVIGGKGLEKGVLEVKNRKTGEKRELPVADWQN 564 >gi|209364247|ref|YP_001425332.2| prolyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] gi|207082180|gb|ABS76694.2| prolyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] Length = 566 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 128/226 (56%), Positives = 167/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM+ + + G+Y+WLPLG + L V ++REE Sbjct: 3 MKVSQFFLATVKETPADAVLASHQLMIRAGMLRKLASGLYTWLPLGLRVLQKVADVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 63 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 123 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S + Sbjct: 183 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDE 228 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 128/240 (53%), Gaps = 17/240 (7%) Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 GP+ +L FIV D + +DF + DF I ++ + P + Sbjct: 338 GPV--NLPIPFIVDRDAAQ--------LVDFSCGANEDDFHWI----NVNWERDVPLGSV 383 Query: 260 SDVHNEKLFDSLPENK-RVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ D P+ K R+ ARGIEVG +F G KYS M+AT GK Y+QMG Y Sbjct: 384 ADIRKVVEGDISPDGKGRLRFARGIEVGQVFQLGDKYSRKMNATVVDELGKSRYLQMGCY 443 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG R VAA IE +HD +GIIWP +APF I+L+ + H R+ACEK+Y L G Sbjct: 444 GIGVSRTVAAAIEQNHDERGIIWPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V WDD E+ G FA DL+G P ++++ + VE K R + E++SLE V++ Sbjct: 504 YEVLWDDRKERPGVMFADMDLIGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLS 563 >gi|238754780|ref|ZP_04616131.1| Prolyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] gi|238706940|gb|EEP99306.1| Prolyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] Length = 572 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 135/277 (48%), Positives = 180/277 (64%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GM+ + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMVRKLASGLYTWLPTGIRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y RIF R+GL P+ A++G IGGD SHEF VLAD+GE + S +F + Sbjct: 181 YNRIFSRMGLDFRPVLADTGSIGGDASHEFQVLADSGEDDIVFSTGSDYAANIEFAEAMA 240 Query: 233 PSEN----------TDFDDIISLNSIVEQWTAPYAAT 259 P+E D + ++ +VEQ+ P T Sbjct: 241 PTEPRAAATEALRIIDTPNAKTIAELVEQFQMPIEKT 277 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 75/186 (40%), Positives = 113/186 (60%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K + RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPPVADLRNVVEGDISPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++YA Sbjct: 440 AMGCYGIGVSRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD E+ G FA +L+G P +++G + + +VE K+R TG ++ + Sbjct: 500 LRTKGIEVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRTGEKQMIKT 559 Query: 432 EEVINY 437 E+I + Sbjct: 560 SEIIEF 565 >gi|222055493|ref|YP_002537855.1| prolyl-tRNA synthetase [Geobacter sp. FRC-32] gi|254782902|sp|B9LZK1|SYP_GEOSF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|221564782|gb|ACM20754.1| prolyl-tRNA synthetase [Geobacter sp. FRC-32] Length = 570 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 125/221 (56%), Positives = 166/221 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P ++E P DAE+ SH+LMLR GMI + + G+Y++LPLG +++ V I+REE Sbjct: 1 MRYSQYFIPTVKETPSDAEVISHQLMLRGGMIRKLAAGVYNYLPLGLRSIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +PT+Q A+LW ESGR++ YGKE+LR DR D GPTHEEV+TD+ R Sbjct: 61 MNRAGAIELLMPTVQPAELWQESGRWEQYGKELLRFRDRKDTEFCLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ + + SY+KM+ + Sbjct: 121 EVKSYRQLPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVDEKAADISYDKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R GLK + A++G IGG SHEF+VLA++GE + Sbjct: 181 YRRIFERCGLKFRAVEADTGSIGGSWSHEFMVLAESGEDAI 221 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 78/179 (43%), Positives = 111/179 (62%), Gaps = 3/179 (1%) Query: 260 SDVHNEKLFDSLPENKRVSA---RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N L D P + + RGIEVGH+F GTKYS M AT+ ADGK+ + MG Sbjct: 380 ADIRNVVLGDPCPRCESGTLEMWRGIEVGHVFKLGTKYSKAMKATYLDADGKEQIIFMGC 439 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R VAA IE +HD GII+P +APF + + + V R+A E IY +L+ G Sbjct: 440 YGIGIGRTVAACIEQNHDENGIIFPLPIAPFHCIISALNMKEDVVREASEAIYGQLAAAG 499 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +V DD E+ G +F ADL+G P++++VGSK ++D KVE+K R +G E +S+ + + Sbjct: 500 IEVLLDDRDERPGFKFKDADLIGIPMRIVVGSKNLADGKVELKCRRSGEVELLSIADAV 558 >gi|238918575|ref|YP_002932089.1| prolyl-tRNA synthetase [Edwardsiella ictaluri 93-146] gi|259511594|sp|C5B780|SYP_EDWI9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|238868143|gb|ACR67854.1| prolyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146] Length = 572 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 127/224 (56%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLNKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNYAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF T E + +Y M+ + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQESLQETYEAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFS 224 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/178 (38%), Positives = 114/178 (64%), Gaps = 3/178 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K + RGIEVGHIF GTKY+ ++AT +G DG++ + MG Y Sbjct: 385 ADIRNVIEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYTEALNATVQGEDGRNQLMTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++Y L G Sbjct: 445 GIGVTRVVAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVKEVAERLYDGLRAKG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +V DD E+ G FA +L+G P +++G + + ++++E K+R +G + +S++E+ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVIGDRNLDNNEIEYKYRRSGDKLMISVDEI 562 >gi|295677734|ref|YP_003606258.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1002] gi|295437577|gb|ADG16747.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1002] Length = 578 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 139/257 (54%), Positives = 181/257 (70%), Gaps = 11/257 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIISHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRRQGDFVLGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD EG + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAEGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDFMDFPIPSENTD 238 Y+RIF RLGL+ + A++G IGG SHEF V+ADTGE + +C S DF + N + Sbjct: 181 YVRIFTRLGLEFRAVAADNGSIGGSGSHEFHVIADTGEDAIAYCPSSDF------AANVE 234 Query: 239 FDDIISLNSIVEQWTAP 255 D + L + Q AP Sbjct: 235 AADALPL---IAQRAAP 248 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 104/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+AT GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVLDICRGIEVGHVFQLGTKYSEAMNATCLDETGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 +MG YGIG R++ A IE + D KGIIWP+S+APF++ L + +D+ R+ +K+YA Sbjct: 442 EMGCYGIGVTRILGAAIEQNFDDKGIIWPESIAPFEVVLCPM-GYDRSDAVREQADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 501 ELAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKDGKIEYQGR 551 >gi|83720100|ref|YP_441693.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264] gi|167618612|ref|ZP_02387243.1| prolyl-tRNA synthetase [Burkholderia thailandensis Bt4] gi|257137862|ref|ZP_05586124.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264] gi|114152178|sp|Q2SZF6|SYP_BURTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|83653925|gb|ABC37988.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264] Length = 578 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 131/229 (57%), Positives = 171/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 229 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 73/171 (42%), Positives = 104/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVIADIRNVKAGDPSPDGKGVLDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGIIWP+++APF++ L + +D+ R+A +K+YA Sbjct: 442 VMGCYGIGVTRILGAAIEQNFDDKGIIWPEAIAPFEVVLCPM-GYDRSDAVREAADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 501 DLAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 551 >gi|82523942|emb|CAI78664.1| prolyl-tRNA synthetase [uncultured delta proteobacterium] Length = 574 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 129/226 (57%), Positives = 166/226 (73%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ LP L+E P DAE+ SHKLM+R GMI + + GIYS+LPLG + + V I+REE Sbjct: 1 MRYSEMHLPTLREIPSDAEVVSHKLMIRAGMIRKLTSGIYSYLPLGYRVIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P +Q ++LW ESGR+ YGKE+LR DR+D+ +GPTHEEV+TD+ R+ Sbjct: 61 MNKAGAQEVFMPMVQPSELWEESGRWVHYGKELLRFRDRHDRPYCFGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+YR LP YQIQ KFRDE+RPRFGVMR REF MKDAYSFD G+++SY KMF + Sbjct: 121 DVKTYRQLPLNLYQIQTKFRDEVRPRFGVMRCREFGMKDAYSFDADEAGAQNSYEKMFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 Y IF R GL+ P+ A+SG IGG SHEF+V+AD+GE VFC K Sbjct: 181 YNNIFRRCGLRFRPVEADSGSIGGKYSHEFMVMADSGEDAMVFCEK 226 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 102/158 (64%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GTKYS M A + DG++ + MG YGIG R VAA IE ++D +GI Sbjct: 403 ARGIEVGHVFKLGTKYSKAMKAVYLDKDGQEKVMIMGCYGIGIGRTVAACIEQNYDDQGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +AP+ + + + +D+ D E +Y ++ +V DD E+ G +F ADL+ Sbjct: 463 VWPVPLAPYHVIITPVNVNDKSISDVAENLYNKMQDKKIEVILDDRDERAGVKFNDADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G PL+V++G K ++ +KVE+K R TG + ++++E++N Sbjct: 523 GIPLRVVIGQKNLAQNKVELKIRKTGENKLIAVDEIVN 560 >gi|167580503|ref|ZP_02373377.1| prolyl-tRNA synthetase [Burkholderia thailandensis TXDOH] Length = 578 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 131/229 (57%), Positives = 171/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 229 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 73/171 (42%), Positives = 104/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVIADIRNVKAGDPSPDGKGVLDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGIIWP+++APF++ L + +D+ R+A +K+YA Sbjct: 442 VMGCYGIGVTRILGAAIEQNFDDKGIIWPEAIAPFEVVLCPM-GYDRSDAVREAADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 501 DLAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 551 >gi|51245016|ref|YP_064900.1| prolyl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|81826866|sp|Q6AP31|SYP_DESPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|50876053|emb|CAG35893.1| probable prolyl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 570 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 129/226 (57%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+P +E P +AE+ASH+LMLR G + + S G+YS+LP G A+ V I+REE Sbjct: 1 MRYSQSFIPTKKETPAEAEVASHQLMLRAGFMRKLSSGVYSYLPYGLAAIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA EM +P +Q ADLW E+GRY+ YG E+LR DRN++ GPTHEEV+TDI R+ Sbjct: 61 MNRAGAQEMLMPMVQPADLWKETGRYEKYGPELLRFFDRNNRESCLGPTHEEVITDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ E + SY+KMF + Sbjct: 121 ELSSYRDLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDVDDEQANLSYDKMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ P++A+SG IGG SHEF+VLA TGE + KD Sbjct: 181 YKRIFTRCGLQFRPVQADSGAIGGSHSHEFMVLAKTGEDTIVVCKD 226 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/160 (41%), Positives = 93/160 (58%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVGH+F GT YS M+A F+ G + MG YGIG RVVAA IE +HD GII+ Sbjct: 403 GIEVGHVFKLGTGYSESMNARFQDGTGDEKPFVMGCYGIGVSRVVAAAIEQNHDKDGIIF 462 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P +AP+ ++++N+ D A EK+YA L G V DD E+ G++F ADLLG Sbjct: 463 PVPLAPYTVTVLNLGLKDPEITAAAEKLYAELQAAGLSVLLDDRDERPGAKFKDADLLGI 522 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 P ++ VG + VE++ R G E+M+ E ++ + Sbjct: 523 PYRLTVGKGLAKNGMVEVRRRRDGHTEEMTPEVAADFLAR 562 >gi|164685792|ref|ZP_01945930.2| prolyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|165918393|ref|ZP_02218479.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 334] gi|164601306|gb|EAX33436.2| prolyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|165917899|gb|EDR36503.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 334] Length = 564 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 128/226 (56%), Positives = 166/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM + + G+Y+WLPLG + L V ++REE Sbjct: 1 MKVSQFFLATVKETPADAVLASHQLMIRAGMFRKLASGLYTWLPLGLRVLQKVADVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 61 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 121 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S + Sbjct: 181 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDE 226 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 128/240 (53%), Gaps = 17/240 (7%) Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 GP+ +L FIV D + +DF + DF I ++ + P + Sbjct: 336 GPV--NLPIPFIVDRDAAQ--------LVDFSCGANEDDFHWI----NVNWERDVPLGSV 381 Query: 260 SDVHNEKLFDSLPENK-RVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ D P+ K R+ ARGIEVG +F G KYS M+AT GK Y+QMG Y Sbjct: 382 ADIRKVVEGDISPDGKGRLRFARGIEVGQVFQLGDKYSRKMNATVVDELGKSRYLQMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG R VAA IE +HD +GIIWP +APF I+L+ + H R+ACEK+Y L G Sbjct: 442 GIGVSRTVAAAIEQNHDERGIIWPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAG 501 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V WDD E+ G FA DL+G P ++++ + VE K R + E++SLE V++ Sbjct: 502 YEVLWDDRKERPGVMFADMDLIGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLS 561 >gi|212219440|ref|YP_002306227.1| prolyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] gi|212013702|gb|ACJ21082.1| prolyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] Length = 566 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 128/226 (56%), Positives = 166/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM + + G+Y+WLPLG + L V ++REE Sbjct: 3 MKVSQFFLATVKETPADAVLASHQLMIRAGMFRKLASGLYTWLPLGLRVLQKVADVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 63 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 123 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S + Sbjct: 183 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDE 228 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 128/240 (53%), Gaps = 17/240 (7%) Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 GP+ +L FIV D + +DF + DF I ++ + P + Sbjct: 338 GPV--NLPIPFIVDRDAAQ--------LVDFSCGANEDDFHWI----NVNWERDVPLGSV 383 Query: 260 SDVHNEKLFDSLPENK-RVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ D P+ K R+ ARGIEVG +F G KYS M+AT GK Y+QMG Y Sbjct: 384 ADIRKVVEGDISPDGKGRLRFARGIEVGQVFQLGDKYSRKMNATVVDELGKSRYLQMGCY 443 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG R VAA IE +HD +GIIWP +APF I+L+ + H R+ACEK+Y L G Sbjct: 444 GIGVSRTVAAAIEQNHDERGIIWPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V WDD E+ G FA DL+G P ++++ + VE K R + E++SLE V++ Sbjct: 504 YEVLWDDRKERPGVMFADMDLIGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLS 563 >gi|126440120|ref|YP_001060493.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 668] gi|166980109|sp|A3NDS2|SYP_BURP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|126219613|gb|ABN83119.1| proline--tRNA ligase [Burkholderia pseudomallei 668] Length = 578 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 131/229 (57%), Positives = 171/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 229 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGI+WP+++APF++ L + +D+ R+A +K+YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPM-GYDRSDAVREAADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 501 ELAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 551 >gi|269137906|ref|YP_003294606.1| prolyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|267983566|gb|ACY83395.1| prolyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|304557958|gb|ADM40622.1| Prolyl-tRNA synthetase [Edwardsiella tarda FL6-60] Length = 572 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 126/224 (56%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLNKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNYAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF T + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQASLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S Sbjct: 181 YGRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFS 224 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 115/181 (63%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K + RGIEVGHIF GTKY+ ++AT +G DG++ + MG Y Sbjct: 385 ADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYTEALNATVQGEDGRNQLMTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++Y L G Sbjct: 445 GIGVTRVVAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVKEVAERLYDELRAKG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P V++G + + ++++E K+R +G + +S++E+ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTVVIGDRNLDNNEIEYKYRRSGEKLMISVDEIAA 564 Query: 437 Y 437 + Sbjct: 565 F 565 >gi|237813889|ref|YP_002898340.1| proline--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|237505775|gb|ACQ98093.1| proline--tRNA ligase [Burkholderia pseudomallei MSHR346] Length = 578 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 131/229 (57%), Positives = 171/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 229 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGI+WP+++APF++ L + +D+ R+A +K+YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPM-GYDRSDAVREAADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 501 DLAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 551 >gi|167825898|ref|ZP_02457369.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 9] gi|226196858|ref|ZP_03792437.1| proline--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|254299336|ref|ZP_04966786.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|157809003|gb|EDO86173.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|225931118|gb|EEH27126.1| proline--tRNA ligase [Burkholderia pseudomallei Pakistan 9] Length = 578 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 131/229 (57%), Positives = 171/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 229 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGI+WP+++APF++ L + +D+ R+A +K+YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPM-GYDRSDAVREAADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 501 DLAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 551 >gi|291280439|ref|YP_003497274.1| prolyl-tRNA synthetase [Deferribacter desulfuricans SSM1] gi|290755141|dbj|BAI81518.1| prolyl-tRNA synthetase [Deferribacter desulfuricans SSM1] Length = 573 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 131/251 (52%), Positives = 175/251 (69%), Gaps = 10/251 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP L+E+P +AE+ SHK MLR GMI + + GIY++LP G K + V I+R+ Sbjct: 1 MRLSQYFLPTLREDPSEAEVVSHKFMLRAGMIRKVAAGIYNYLPAGLKVIKKVENIVRKY 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P + A+LW+ESGR++ YGKE+LRL DR+D+ GPTHEEV+TDI R+ Sbjct: 61 MNEAGAIELLMPAVVPAELWIESGRWNVYGKELLRLKDRHDRDFCIGPTHEEVVTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ EG++ SY M+ + Sbjct: 121 EVKSYKQLPLNLYQIQTKFRDEVRPRFGLMRGREFIMKDAYSFDVDDEGAEKSYMLMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF GL+ + + A+SG IGG+ SHEF+V ADTGE DF I N DF Sbjct: 181 YCKIFEACGLEYVVVEADSGAIGGNFSHEFMVTADTGE----------DFVISCTNCDFA 230 Query: 241 DIISLNSIVEQ 251 I I+++ Sbjct: 231 ANIEKAPILDE 241 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 67/157 (42%), Positives = 94/157 (59%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVGHIF GTKYS M+A + DGK + MG YGIG R AA IE +HD KGI Sbjct: 402 TKGIEVGHIFKLGTKYSKAMNAYYLDKDGKQKLMVMGCYGIGIGRTAAAAIEQNHDEKGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP +APF++ ++ I + + + E +Y +L DV DD E+ G +F ADL+ Sbjct: 462 IWPVQIAPFEVVIVPINTNSEDVVNLSETLYLKLKNNNVDVLIDDRDERAGVKFNDADLV 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G+PL++ VG+K ++ VEI R T ++ E+ I Sbjct: 522 GYPLRINVGAKALAKGNVEIFIRKTKETVEVKKEDAI 558 >gi|78065148|ref|YP_367917.1| prolyl-tRNA synthetase [Burkholderia sp. 383] gi|114152177|sp|Q39JU3|SYP_BURS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|77965893|gb|ABB07273.1| Prolyl-tRNA synthetase [Burkholderia sp. 383] Length = 578 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 129/224 (57%), Positives = 167/224 (74%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G IE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGGIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +C Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYC 224 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPDVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YG+G R++ A IE + D KGIIWP+S+APF++ L + +D+ + R+ +K+YA Sbjct: 442 LMGCYGVGVTRILGAAIEQNFDDKGIIWPESIAPFEVVLCPM-GYDRSDMVRETADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G FA +L+G P ++++G + + + K+E + R Sbjct: 501 ELVAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGR 551 >gi|251788479|ref|YP_003003200.1| prolyl-tRNA synthetase [Dickeya zeae Ech1591] gi|247537100|gb|ACT05721.1| prolyl-tRNA synthetase [Dickeya zeae Ech1591] Length = 572 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 126/224 (56%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ MF + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQVTYDAMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+ L P++A++G IGG+ SHEF VLA +GE + S Sbjct: 181 YSKIFSRMDLDFRPVQADTGSIGGNASHEFQVLASSGEDDIVFS 224 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 109/182 (59%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF G KYS + AT +G DG++ + MG Sbjct: 384 VADIRNVVEGDRSPDGKGTLLIKRGIEVGHIFQLGKKYSEALKATVQGEDGRNQTLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RV+AA IE +HD +GIIWPD++ PF+++++ + H ++ E IY +L Sbjct: 444 YGIGVTRVIAAAIEQNHDDRGIIWPDAITPFQVAILPMNMHKSFRVQEVAEGIYQQLRAN 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +++G + + + ++E KHR G +E + +++ Sbjct: 504 GIDVLLDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIV 563 Query: 436 NY 437 + Sbjct: 564 EF 565 >gi|53720607|ref|YP_109593.1| prolyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|76808687|ref|YP_334889.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121599492|ref|YP_991789.1| prolyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124386640|ref|YP_001027282.1| prolyl-tRNA synthetase [Burkholderia mallei NCTC 10229] gi|126449387|ref|YP_001082781.1| prolyl-tRNA synthetase [Burkholderia mallei NCTC 10247] gi|126455301|ref|YP_001067757.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|134280246|ref|ZP_01766957.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|167920563|ref|ZP_02507654.1| prolyl-tRNA synthetase [Burkholderia pseudomallei BCC215] gi|217421246|ref|ZP_03452751.1| proline--tRNA ligase [Burkholderia pseudomallei 576] gi|242316379|ref|ZP_04815395.1| proline--tRNA ligase [Burkholderia pseudomallei 1106b] gi|251766621|ref|ZP_02264460.2| proline--tRNA ligase [Burkholderia mallei PRL-20] gi|254178869|ref|ZP_04885523.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|254180577|ref|ZP_04887175.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|254190985|ref|ZP_04897491.1| prolyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|254199071|ref|ZP_04905486.1| prolyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|254258028|ref|ZP_04949082.1| proline--tRNA ligase [Burkholderia pseudomallei 1710a] gi|81824656|sp|Q63QM5|SYP_BURPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152176|sp|Q3JNG4|SYP_BURP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980105|sp|A3MR95|SYP_BURM7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980106|sp|A2S5R3|SYP_BURM9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980107|sp|A1V0N6|SYP_BURMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980108|sp|A3NZI6|SYP_BURP0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|52211021|emb|CAH37009.1| prolyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|76578140|gb|ABA47615.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121228302|gb|ABM50820.1| prolyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124294660|gb|ABN03929.1| proline--tRNA ligase [Burkholderia mallei NCTC 10229] gi|126228943|gb|ABN92483.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|126242257|gb|ABO05350.1| proline--tRNA ligase [Burkholderia mallei NCTC 10247] gi|134248253|gb|EBA48336.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|157938659|gb|EDO94329.1| prolyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|160694783|gb|EDP84791.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|169656901|gb|EDS88298.1| prolyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|184211116|gb|EDU08159.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|217396658|gb|EEC36675.1| proline--tRNA ligase [Burkholderia pseudomallei 576] gi|242139618|gb|EES26020.1| proline--tRNA ligase [Burkholderia pseudomallei 1106b] gi|243065285|gb|EES47471.1| proline--tRNA ligase [Burkholderia mallei PRL-20] gi|254216717|gb|EET06101.1| proline--tRNA ligase [Burkholderia pseudomallei 1710a] Length = 578 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 131/229 (57%), Positives = 171/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 229 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGI+WP+++APF++ L + +D+ R+A +K+YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPM-GYDRSDAVREAADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 501 DLAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 551 >gi|238026159|ref|YP_002910390.1| prolyl-tRNA synthetase [Burkholderia glumae BGR1] gi|237875353|gb|ACR27686.1| Prolyl-tRNA synthetase [Burkholderia glumae BGR1] Length = 578 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 130/229 (56%), Positives = 171/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRIAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDQAGLKESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+R+F R+GL+ + A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 YVRVFTRIGLEFRAVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 229 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 103/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS + ATF GK + Sbjct: 382 PEPVVADLRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSKALGATFLDEGGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D +GIIWP+++APF++ L + ++ R+ +++YA Sbjct: 442 EMGCYGIGVTRILGAAIEQNFDDRGIIWPEAIAPFEVVLCPMGYDRSELVRETADQLYAA 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 LS G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 502 LSAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 551 >gi|260548877|ref|ZP_05823099.1| prolyl-tRNA synthetase [Acinetobacter sp. RUH2624] gi|260408045|gb|EEX01516.1| prolyl-tRNA synthetase [Acinetobacter sp. RUH2624] Length = 571 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 126/226 (55%), Positives = 166/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+D + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHDNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLASSGEDDIAFSTE 226 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 68/157 (43%), Positives = 95/157 (60%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + G DGK V MG YGIG RVVAA IE ++D KGII Sbjct: 410 RGIEVGHIFQLGTKYSEALGCKVLGEDGKPFTVTMGCYGIGVTRVVAAAIEQNYDDKGII 469 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF+I+++ + AH +A E +YA L G DV DD E+ G +F+ +L+ Sbjct: 470 WPQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDVLLDDRNERPGVKFSDLELM 529 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++++G K + E K R +++ EE++ Sbjct: 530 GIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELL 566 >gi|184159387|ref|YP_001847726.1| prolyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|239501767|ref|ZP_04661077.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB900] gi|332876227|ref|ZP_08444002.1| proline--tRNA ligase [Acinetobacter baumannii 6014059] gi|226695842|sp|B2HY33|SYP_ACIBC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226731481|sp|A3M8I1|SYP_ACIBT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|183210981|gb|ACC58379.1| Prolyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|193078264|gb|ABO13225.2| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] gi|322509299|gb|ADX04753.1| proS [Acinetobacter baumannii 1656-2] gi|323519326|gb|ADX93707.1| prolyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715] gi|332735499|gb|EGJ66551.1| proline--tRNA ligase [Acinetobacter baumannii 6014059] Length = 571 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 126/226 (55%), Positives = 166/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+D + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHDNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTE 226 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 68/157 (43%), Positives = 95/157 (60%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + G DGK V MG YGIG RVVAA IE ++D KGII Sbjct: 410 RGIEVGHIFQLGTKYSEALGCKVLGEDGKPFTVTMGCYGIGVTRVVAAAIEQNYDDKGII 469 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF+I+++ + AH +A E +YA L G DV DD E+ G +F+ +L+ Sbjct: 470 WPQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDVLLDDRNERPGVKFSDLELM 529 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++++G K + E K R +++ EE++ Sbjct: 530 GIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELL 566 >gi|260557205|ref|ZP_05829421.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] gi|260409311|gb|EEX02613.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] Length = 571 Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 126/226 (55%), Positives = 166/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+D + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHDNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTE 226 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/157 (42%), Positives = 95/157 (60%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + G DGK V MG YGIG RVVAA IE ++D KGII Sbjct: 410 RGIEVGHIFQLGTKYSEALGCKVLGEDGKPFTVTMGCYGIGVTRVVAAAIEQNYDDKGII 469 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF+I+++ + AH +A E +YA L G D+ DD E+ G +F+ +L+ Sbjct: 470 WPQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDLLLDDRNERPGVKFSDLELM 529 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++++G K + E K R +++ EE++ Sbjct: 530 GIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELL 566 >gi|169794838|ref|YP_001712631.1| prolyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|213157835|ref|YP_002320633.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|215482385|ref|YP_002324567.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|301345755|ref|ZP_07226496.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB056] gi|301511535|ref|ZP_07236772.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB058] gi|301594855|ref|ZP_07239863.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB059] gi|332852292|ref|ZP_08434097.1| proline--tRNA ligase [Acinetobacter baumannii 6013150] gi|332870515|ref|ZP_08439279.1| proline--tRNA ligase [Acinetobacter baumannii 6013113] gi|226695840|sp|B7GWV6|SYP_ACIB3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226695841|sp|B7I854|SYP_ACIB5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226731418|sp|B0V4Y6|SYP_ACIBY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169147765|emb|CAM85628.1| prolyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|213056995|gb|ACJ41897.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|213986493|gb|ACJ56792.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|332729422|gb|EGJ60762.1| proline--tRNA ligase [Acinetobacter baumannii 6013150] gi|332732252|gb|EGJ63520.1| proline--tRNA ligase [Acinetobacter baumannii 6013113] Length = 571 Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 126/226 (55%), Positives = 166/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+D + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHDNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTE 226 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 68/157 (43%), Positives = 95/157 (60%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + G DGK V MG YGIG RVVAA IE ++D KGII Sbjct: 410 RGIEVGHIFQLGTKYSEALGCKVLGEDGKPFTVTMGCYGIGVTRVVAAAIEQNYDDKGII 469 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF+I+++ + AH +A E +YA L G DV DD E+ G +F+ +L+ Sbjct: 470 WPQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDVLLDDRNERPGVKFSDLELM 529 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++++G K + E K R +++ EE++ Sbjct: 530 GIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELL 566 >gi|326426858|gb|EGD72428.1| prolyl-tRNA synthetase [Salpingoeca sp. ATCC 50818] Length = 447 Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 148/438 (33%), Positives = 244/438 (55%), Gaps = 17/438 (3%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 + F+P+L+E P+ A SH+L+LR G I Q G+Y+ LP+ + + + +++R E N Sbjct: 11 RLFVPLLKEVPKHAVAHSHQLLLRGGYIWQAGSGLYALLPMANRVVQRLQSLVRAELNAI 70 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G+ E +P + LW +SGR+ G E+ RL DR A THEE +T + S + S Sbjct: 71 GSQECVLPAITDKHLWQQSGRWQEAGDELFRLEDRKGAAYCLAATHEETVTALVSSLVSS 130 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 +R+LP YQ+Q K+RDE+RPR+G++R REF+MKD Y+FD + + ++ +Y K+ Y RI Sbjct: 131 HRSLPLYLYQMQPKYRDEMRPRYGLLRCREFMMKDMYTFDSSEQDARATYAKVVECYQRI 190 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 RLG+ ++A++G IGG LSHEF + A+ GE ++ F D + N I Sbjct: 191 LQRLGVPFAKVQADTGLIGGSLSHEFQIKAEIGEDELI----FCDTCNQAAN-----IEK 241 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ +++ + S +++GIEVGH F GTKYS A F Sbjct: 242 IDGLIDACPHASPSPSTSPRPPSASC----SWTTSKGIEVGHAFLLGTKYSTVFDAAFLD 297 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 AD + + MG YG+G R+++AV E+ HD +G+IWP ++APF +S+ ++ + + Sbjct: 298 ADSQRQDIHMGCYGLGLTRMLSAVAEAQHDAEGLIWPIAMAPFVVSIASVGRMNTFKDEK 357 Query: 365 CEKIYARLS---KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 C +Y L+ ++ + D + A + ++G P V+VG F S+ +E+ R Sbjct: 358 CRALYEVLNSRPELSDLIVLDTRDMSPRHKLANSRMVGIPFTVLVGDWFDSE-HLEVYAR 416 Query: 422 LTGIREDMSLEEVINYAS 439 + ++DMS+EE ++ S Sbjct: 417 TSHDKQDMSVEEFVSLLS 434 >gi|330815470|ref|YP_004359175.1| Prolyl-tRNA synthetase [Burkholderia gladioli BSR3] gi|327367863|gb|AEA59219.1| Prolyl-tRNA synthetase [Burkholderia gladioli BSR3] Length = 578 Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 128/224 (57%), Positives = 169/224 (75%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR+ DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRIKDRKDNDFVIGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDQAGLKESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+R+F R+GL+ + A++G IGG SHEF V+ADTGE + +C Sbjct: 181 YVRVFTRIGLEFRAVAADNGSIGGSGSHEFHVIADTGEDAIAYC 224 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 102/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N + D P+ K V RGIEVGH+F GTKYS M +TF GK + Sbjct: 382 PEPEVADLRNVQKGDPSPDGKGVLDICRGIEVGHVFQLGTKYSKAMGSTFLDEGGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D KGIIWP+S+APF++ L + + R+A ++++A Sbjct: 442 EMGCYGIGITRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSEAVRNAADQLHAD 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 502 LLAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 551 >gi|163750377|ref|ZP_02157617.1| prolyl-tRNA synthetase [Shewanella benthica KT99] gi|161329867|gb|EDQ00853.1| prolyl-tRNA synthetase [Shewanella benthica KT99] Length = 569 Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 127/226 (56%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P DAE+ SH+LMLR GM+ +++ G+YSWLP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPADAEVVSHQLMLRAGMVRRNASGLYSWLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW+E+GR++ +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 61 MNKAGAIEILMPMVQPADLWIETGRWEKFGPELLRFKDRHNRDFVLGPTHEEVITDIIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E +Y+ MF + Sbjct: 121 EINSYKQLPLTLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDQESMDVTYDTMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R+GL P+ A++G IGG +SHEF VLAD+GE + S + Sbjct: 181 YNNIFERMGLSFRPVLADTGSIGGSMSHEFHVLADSGEDLIAYSTE 226 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 98/159 (61%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M A +GK + MG YG+G R+VAA IE +HD +GII Sbjct: 406 RGIEVGHIFQLGTNYSESMHANVLDKNGKSKTLLMGCYGVGVSRIVAAAIEQNHDDRGII 465 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APFK+ ++ + H +D EK+Y L+ G +V +DD E+ G FA +L+ Sbjct: 466 WPAAIAPFKVGILPMNMHKSHRVKDMAEKLYQDLNDAGIEVLFDDRKERPGVMFADMELV 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P V++G + + + E K+R TG + D+ ++++++ Sbjct: 526 GLPHVVVIGDRNIDNGVFEYKNRRTGEKRDIPFDQLLDF 564 >gi|302342678|ref|YP_003807207.1| prolyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] gi|301639291|gb|ADK84613.1| prolyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] Length = 571 Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 125/221 (56%), Positives = 163/221 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M S+Y +P L+ENP DAE+ SH+LMLR G+I + + GIY+WLP+G + L V AI+R+E Sbjct: 1 MNFSRYLIPTLKENPSDAEVVSHQLMLRAGLIRKLAGGIYTWLPMGLRVLRKVEAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ +P +Q A+LW ESGR+D YG+E+LR DR+D PTHEEV+TD+ R Sbjct: 61 MNAAGAQELLMPGVQPAELWRESGRWDFYGRELLRFVDRHDNEYCLAPTHEEVITDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR++P YQIQ KFRDE+RPRFGVMR+REFLMKDAYSFD + + + SY M + Sbjct: 121 EIQSYRDMPLNLYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFDASEDAAAQSYQIMRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y+RIF RLGL+ + A+SG IGG SHEF+VLADTGE + Sbjct: 181 YMRIFDRLGLRYGVVEADSGSIGGSFSHEFMVLADTGEDAI 221 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/170 (38%), Positives = 98/170 (57%), Gaps = 3/170 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A A +D+ N D P ARGIEVGHIF GTKYS + AT+ DG+ Sbjct: 374 AAGATIADLRNLAAGDPCPSCGAPPTLARGIEVGHIFRLGTKYSKALGATYLDVDGQAKT 433 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + MG YGIG R+VAA IE +D GI++P ++AP ++++ ++A +A ++++ Sbjct: 434 IVMGCYGIGVSRIVAAAIEQGNDEAGIVFPLAIAPVSVAVLPMRAEGPAM-EAAQRLHDE 492 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L +G D DD + G +F +DLLG PL+V+VG K + +VE+K R Sbjct: 493 LWALGVDCLLDDRDIRPGVKFKDSDLLGVPLRVVVGPKGLETGEVELKKR 542 >gi|311280836|ref|YP_003943067.1| prolyl-tRNA synthetase [Enterobacter cloacae SCF1] gi|308750031|gb|ADO49783.1| prolyl-tRNA synthetase [Enterobacter cloacae SCF1] Length = 572 Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 141/303 (46%), Positives = 195/303 (64%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D D+ + N +F Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFS-DTSDY---AANIEFA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++ +AP AA + L D+ N + A +E ++SLP+ Sbjct: 237 EALAP-------SAPRAAAT--QEMTLVDT--PNAKTIAELVE---------QFSLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 112/182 (61%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS M+A +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLMIKRGIEVGHIFQLGTKYSQAMNAAVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P V++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTVVIGDRNLDNDDIEYKYRRNGDKQLIKTGDIL 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|169632514|ref|YP_001706250.1| prolyl-tRNA synthetase [Acinetobacter baumannii SDF] gi|226695258|sp|B0VRW9|SYP_ACIBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169151306|emb|CAP00010.1| prolyl-tRNA synthetase [Acinetobacter baumannii] Length = 571 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 126/226 (55%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRTSRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG +LR DR+D + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPGLLRFKDRHDNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +YN M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYNVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTE 226 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 67/156 (42%), Positives = 94/156 (60%), Gaps = 1/156 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVGHIF GTKYS + G DGK V MG YGIG RVVAA IE ++D KGIIW Sbjct: 411 GIEVGHIFQLGTKYSEALGCKVLGEDGKPFTVTMGCYGIGVTRVVAAAIEQNYDDKGIIW 470 Query: 341 PDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 P ++APF+I+++ + AH +A E +YA L G DV DD E+ G +F+ +L+G Sbjct: 471 PQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDVLLDDRNERPGVKFSDLELMG 530 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 P ++++G K + E K R +++ EE++ Sbjct: 531 IPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELL 566 >gi|307132338|ref|YP_003884354.1| prolyl-tRNA synthetase [Dickeya dadantii 3937] gi|306529867|gb|ADM99797.1| prolyl-tRNA synthetase [Dickeya dadantii 3937] Length = 572 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 125/226 (55%), Positives = 164/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQVTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+ L P++A++G IGG+ SHEF VLA +GE + S + Sbjct: 181 YSKIFSRMDLDFRPVQADTGSIGGNASHEFQVLASSGEDDIVFSTE 226 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 110/181 (60%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K + RGIEVGHIF G KYS + AT +G DG++ + MG Y Sbjct: 385 ADIRNVVEGDRSPDGKGTLLIKRGIEVGHIFQLGKKYSEALKATVQGEDGRNQTLTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RV+AA IE +HD +GIIWPD++APF+++++ + H ++ E IY +L G Sbjct: 445 GIGVTRVIAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVQEVAEGIYQQLRANG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD E+ G FA +L+G P +++G + + + ++E KHR G +E + +++ Sbjct: 505 VDVLLDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIVE 564 Query: 437 Y 437 + Sbjct: 565 F 565 >gi|226942102|ref|YP_002797176.1| prolyl-tRNA synthetase [Laribacter hongkongensis HLHK9] gi|226717029|gb|ACO76167.1| Syp [Laribacter hongkongensis HLHK9] Length = 569 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 128/224 (57%), Positives = 166/224 (74%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFL L+E P +AE+ SHKLMLR GMI + S G+Y+W+PLG + L V AI+REE Sbjct: 1 MRASQYFLSTLKEAPNEAELPSHKLMLRAGMIKRLSSGLYTWMPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YGKE+LR+ DR+++ GPTHEEV+TD R Sbjct: 61 MNRAGAIELLMPAIQPAELWQESGRWEFYGKELLRVKDRHERDFCVGPTHEEVITDAVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + K +Y M+ + Sbjct: 121 EVKSYKQLPLNFYQIQTKFRDEVRPRFGVMRAREFVMKDAYSFHTDFDSLKATYQGMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y R+F RLGL P+ A++G IGG SHEF VLAD+GE + +C Sbjct: 181 YCRVFTRLGLDFRPVAADTGSIGGTGSHEFQVLADSGEDVIAYC 224 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 5/208 (2%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSL 296 +D + L + P +D+ N D P+ + R+ RGIEVGH+F KY+ Sbjct: 362 EDDVHLTGVNFGRDCPEPEVADLRNVVEGDPSPDGQGEIRLC-RGIEVGHVFQLRKKYAE 420 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK- 355 M F DGK ++MG YGIG RVVAA IE D +GII+ D++APF +S++ + Sbjct: 421 AMDCGFLDQDGKRQIMEMGCYGIGVSRVVAAAIEQGFDERGIIFTDAMAPFTVSIVPMGY 480 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + + A + +YA L G DV DD E+ G A ++L+G P +V++G + + + K Sbjct: 481 RRSESVKAAADALYAELVAAGVDVLLDDRDERPGVLLADSELIGIPHRVVIGDRGLKEGK 540 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFS 443 VE + R + + E+ + + + Sbjct: 541 VEYQGRRETEATSVEVAEIAAFVRSKLA 568 >gi|294140027|ref|YP_003556005.1| prolyl-tRNA synthetase [Shewanella violacea DSS12] gi|293326496|dbj|BAJ01227.1| prolyl-tRNA synthetase [Shewanella violacea DSS12] Length = 569 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 126/226 (55%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P DAE+ SH+LMLR GM+ +++ G+YSWLP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPADAEVVSHQLMLRAGMVRRNASGLYSWLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q ADLW+E+GR++ +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 61 MNKAGAVEILMPMVQPADLWIETGRWEKFGPELLRFQDRHNRDFVLGPTHEEVITDIIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E +Y+ MF + Sbjct: 121 EINSYKQLPLTLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDQESMDVTYDAMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R+GL P+ A++G IGG +SHEF VLAD+GE + S + Sbjct: 181 YNNIFERMGLSFRPVLADTGSIGGSMSHEFHVLADSGEDLIAYSTE 226 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P K A RGIEVGHIF GT YS M A +GK + Sbjct: 379 PQAEAADLRNIIEGEPSPCGKGTIALLRGIEVGHIFQLGTNYSESMHANVLDQNGKSKTL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE +HD +GIIWP ++APF + ++ + H +D EK+Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNHDDRGIIWPKAIAPFTVGILPMNMHKSHRVKDIAEKLYQD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G +V +DD E+ G FA +L+G P V++G + + + E K+R TG ++++ Sbjct: 499 LNDAGIEVLFDDRKERPGVMFADMELVGLPHVVVIGDRNIDNGVFEYKNRRTGEKQEIPF 558 Query: 432 EEVINY 437 ++++++ Sbjct: 559 DQLLDF 564 >gi|146310396|ref|YP_001175470.1| prolyl-tRNA synthetase [Enterobacter sp. 638] gi|166980121|sp|A4W6T9|SYP_ENT38 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145317272|gb|ABP59419.1| prolyl-tRNA synthetase [Enterobacter sp. 638] Length = 572 Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 165/224 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLWVESGR++ YG E+LR DR +++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWVESGRWEQYGPELLRFVDRGERSFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKD+YSF + E + +Y+KM+ + Sbjct: 121 ELNSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDSYSFHTSQESLQETYDKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFS 224 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 113/182 (62%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS ++A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLMIKRGIEVGHIFQLGTKYSEALNASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNHDERGIVWPDNLAPFQVAILPMNMHKSYRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P V++G + + +E K+R +G ++ + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTVVIGDRNLDSDDIEYKYRRSGEKQMIKTGDIL 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|118580173|ref|YP_901423.1| prolyl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|166980138|sp|A1APU5|SYP_PELPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118502883|gb|ABK99365.1| prolyl-tRNA synthetase [Pelobacter propionicus DSM 2379] Length = 576 Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 125/218 (57%), Positives = 161/218 (73%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+YF+P ++E P DAE+ SH+LMLR GMI + + GIY++LPLG +++ AI+REE NR Sbjct: 4 SRYFIPTIKETPSDAEVVSHQLMLRAGMIRKLAAGIYNYLPLGLRSIRKFEAIVREEMNR 63 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GAIEM +P++Q A+LW ESGR+ YGKE+LR DR D GPTHEEV+TD+ R IK Sbjct: 64 AGAIEMLMPSVQPAELWEESGRWSFYGKELLRFRDRKDGEFCMGPTHEEVITDMVRREIK 123 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR +P FYQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ + SY MF +Y+R Sbjct: 124 SYRQMPVNFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDVDSAAADGSYELMFQAYMR 183 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 IF R GL + A++G IGG SHEF+VLAD+GE + Sbjct: 184 IFERCGLNFRAVEADTGTIGGSSSHEFMVLADSGEDAI 221 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/167 (44%), Positives = 104/167 (62%), Gaps = 3/167 (1%) Query: 261 DVHNEKLFDSLPE---NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N + D P K RGIEVGH+F GTKYS + AT+ ADGK+ + MG Y Sbjct: 384 DLRNVEAGDPCPRCEGGKLEMWRGIEVGHVFKLGTKYSQALGATYLDADGKEQVIFMGCY 443 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R VAA IE +HD GII+P +APF S++ + D+ A E++Y RL + G Sbjct: 444 GIGIGRTVAAAIEQNHDDNGIIFPLPLAPFHCSVVALNTKDKGVMAAAEEMYFRLEQQGI 503 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +V +DD E+ G +F DL+G PL+++VGSK +S+ KVE+K R +G Sbjct: 504 EVLFDDRDERPGVKFKDNDLIGIPLRIVVGSKGLSEGKVEVKIRASG 550 >gi|283783983|ref|YP_003363848.1| prolyl-tRNA synthetase [Citrobacter rodentium ICC168] gi|282947437|emb|CBG86984.1| prolyl-tRNA synthetase [Citrobacter rodentium ICC168] Length = 572 Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 138/303 (45%), Positives = 189/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL+ ++A++G IGG SHEF VLA +GE + I S+ +D+ Sbjct: 181 YSKIFTRIGLEFRAVQADTGSIGGSASHEFQVLAQSGEDDI----------IFSDTSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L V AP A + E P+ K ++ +Y+LP+ Sbjct: 231 ANIELAEAV----APKAPRAAATQEMTLVDTPDAKTIAE----------LVEQYNLPIEN 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKAAVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 ++ Sbjct: 564 SF 565 >gi|53726087|ref|YP_104063.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|238561266|ref|ZP_00442346.2| proline--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|254202783|ref|ZP_04909146.1| prolyl-tRNA synthetase [Burkholderia mallei FMH] gi|254208125|ref|ZP_04914475.1| prolyl-tRNA synthetase [Burkholderia mallei JHU] gi|81823924|sp|Q62GV8|SYP_BURMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|52429510|gb|AAU50103.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|147747030|gb|EDK54107.1| prolyl-tRNA synthetase [Burkholderia mallei FMH] gi|147752019|gb|EDK59086.1| prolyl-tRNA synthetase [Burkholderia mallei JHU] gi|238524974|gb|EEP88404.1| proline--tRNA ligase [Burkholderia mallei GB8 horse 4] Length = 578 Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 130/229 (56%), Positives = 170/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF R+G + P+ A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRIGFEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 229 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGI+WP+++APF++ L + +D+ R+A +K+YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPM-GYDRSDAVREAADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 501 DLAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 551 >gi|320084496|emb|CBY94289.1| Prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 572 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 140/303 (46%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ I GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFILGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF----------SDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|271501814|ref|YP_003334840.1| prolyl-tRNA synthetase [Dickeya dadantii Ech586] gi|270345369|gb|ACZ78134.1| prolyl-tRNA synthetase [Dickeya dadantii Ech586] Length = 572 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 125/226 (55%), Positives = 164/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQVTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+ L P++A++G IGG+ SHEF VLA +GE + S + Sbjct: 181 YGKIFSRMDLDFRPVQADTGSIGGNASHEFQVLASSGEDDIVFSTE 226 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 110/181 (60%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K + RGIEVGHIF G KYS + AT +G DG++ + MG Y Sbjct: 385 ADIRNVVEGDRSPDGKGTLLIKRGIEVGHIFQLGKKYSEALKATVQGEDGRNQTLTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RV+AA IE +HD +GIIWPD++APF+++++ + H ++ E IY +L G Sbjct: 445 GIGVTRVIAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVQEVAEGIYQQLRANG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD E+ G FA +L+G P +++G + + + ++E KHR G +E + +++ Sbjct: 505 IDVLLDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIVE 564 Query: 437 Y 437 + Sbjct: 565 F 565 >gi|50083997|ref|YP_045507.1| prolyl-tRNA synthetase [Acinetobacter sp. ADP1] gi|81827514|sp|Q6FE23|SYP_ACIAD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|49529973|emb|CAG67685.1| prolyl-tRNA synthetase [Acinetobacter sp. ADP1] Length = 570 Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 125/226 (55%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L+ V AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGVRVLNKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY YG E+LR DR+D + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGALEVFMPVTQPASLWEESGRYVQYGPELLRFKDRHDNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 ELKSYKQLPINFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHVDQASLQETYDNMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG SHEF VLAD+GE + S + Sbjct: 181 YCRIFTRLGLDFRPVQADTGSIGGSGSHEFHVLADSGEDDIVFSTE 226 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/185 (38%), Positives = 106/185 (57%), Gaps = 3/185 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A ++ D+ N D P+ + V RGIEVGHIF G KYS ++ T G DGK Sbjct: 382 AKFSEIYDLRNVVDGDPSPDGQGVLQIKRGIEVGHIFQLGQKYSEALNCTVLGDDGKPLV 441 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYA 370 V MG YGIG RVVA+ IE ++D KGIIWP ++APF+I+++ + AH +A E +YA Sbjct: 442 VTMGCYGIGVTRVVASAIEQNYDDKGIIWPSAIAPFEIAIVPMNAHKSPKTLEAAEALYA 501 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G DV DD E+ G +F+ +L G P ++++G K + E K R +++ Sbjct: 502 ELQAQGYDVLLDDRNERPGVKFSDLELTGIPHRIVIGEKGLDAGTFEYKGRTDAESVNLT 561 Query: 431 LEEVI 435 +E++ Sbjct: 562 KDELL 566 >gi|157147374|ref|YP_001454693.1| prolyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895] gi|166980115|sp|A8AL94|SYP_CITK8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157084579|gb|ABV14257.1| hypothetical protein CKO_03172 [Citrobacter koseri ATCC BAA-895] Length = 572 Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 141/303 (46%), Positives = 194/303 (64%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG+ SHEF VLA +GE V S D D+ + N +F Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDVIFS-DSSDY---AANIEFA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++ AP AA S L D+ N + A +E +++LP+ Sbjct: 237 EAVAPK-------APRAAAS--QEMTLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYGELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + E++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGEIV 563 Query: 436 NY 437 ++ Sbjct: 564 DF 565 >gi|307731045|ref|YP_003908269.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1003] gi|307585580|gb|ADN58978.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1003] Length = 578 Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 131/229 (57%), Positives = 168/229 (73%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQSDFVIGPTHEEVVTDIARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLRESYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF RLGL + A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 229 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 102/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+AT +GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVLDICRGIEVGHVFQLGTKYSEAMNATCLDENGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D KGIIWP+S+APF++ L + + R+ +K+Y + Sbjct: 442 EMGCYGIGITRILGAAIEQNFDEKGIIWPESIAPFEVVLCPMGYDRSEAVREQADKLYTQ 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 502 LVDAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKDGKLEYQGR 551 >gi|213423623|ref|ZP_03356603.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 322 Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 193/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDI----------VFSDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 >gi|161504638|ref|YP_001571750.1| prolyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189083510|sp|A9MPG5|SYP_SALAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160865985|gb|ABX22608.1| hypothetical protein SARI_02759 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 572 Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF----------SDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLIDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|317493988|ref|ZP_07952404.1| prolyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917761|gb|EFV39104.1| prolyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 572 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 124/226 (54%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+W+P G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWMPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDMVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+KMF + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTSQESLQETYDKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+ L P++A++G IGG+ SHEF VLA +GE V S + Sbjct: 181 YSKIFSRMDLDFRPVQADTGSIGGNASHEFQVLAQSGEDDVVFSSE 226 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K + RGIEVGHIF GTKY+ + AT +G DG++ + Sbjct: 380 PLPLVADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYTEALKATVQGEDGRNQLM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H +D E +Y Sbjct: 440 TMGCYGIGVTRVVAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVKDLAESLYNS 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P V++G + + ++E K+R G ++ + Sbjct: 500 LRSKGIDVIMDDRKERPGVMFADMELIGVPHTVVIGDRNLDSDEIEYKNRRNGEKQMIKT 559 Query: 432 EEVINY 437 E+ ++ Sbjct: 560 GEIEDF 565 >gi|167553343|ref|ZP_02347092.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|238911308|ref|ZP_04655145.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|205322190|gb|EDZ10029.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 572 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF----------SDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|194443070|ref|YP_002039482.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197250542|ref|YP_002145247.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|226701326|sp|B5F8V6|SYP_SALA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701335|sp|B4SV24|SYP_SALNS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|194401733|gb|ACF61955.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197214245|gb|ACH51642.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 572 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF----------SDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|121997498|ref|YP_001002285.1| prolyl-tRNA synthetase [Halorhodospira halophila SL1] gi|152112924|sp|A1WUX1|SYP_HALHL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|121588903|gb|ABM61483.1| prolyl-tRNA synthetase [Halorhodospira halophila SL1] Length = 568 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 125/221 (56%), Positives = 164/221 (74%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++ L +E P DAEI SH+LMLR GMI + S G+Y+WLPLG + L V I+REE Sbjct: 1 MRVTRFPLSTTRETPADAEIVSHQLMLRAGMIRRLSSGLYTWLPLGLRVLQKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ESGR++ YG E+LR+ DR+D+ +GPTHEEV+TD+FR Sbjct: 61 MNRAGALEVLMPAVQPAELWQESGRWEKYGPELLRIRDRHDREGCFGPTHEEVITDLFRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP +YQIQ KFRDE+RPRFGVMR+REFLMKDAYSF L + + Y +M + Sbjct: 121 EIRSYRQLPVNYYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLDDDDLRAEYQRMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R GL P+ A++G IGG +SHEF+VLAD+GE + Sbjct: 181 YCRIFQRTGLAFRPVEADTGAIGGSVSHEFMVLADSGEDAI 221 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 74/191 (38%), Positives = 105/191 (54%), Gaps = 2/191 (1%) Query: 255 PYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P T+D+ D P E RGIEVGHIF GT YS M A+ G++ V Sbjct: 378 PEPETADLREVTAGDPSPDGEGTLTLRRGIEVGHIFQLGTTYSEAMGASVLDEQGQERTV 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE +HD +GI WP +APF+++L+ IKA D +A E +YA L Sbjct: 438 TMGCYGIGVSRVVAAAIEQNHDDRGICWPAPIAPFQVALVAIKAEDPAVAEAAEALYADL 497 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G DV +DD + G +FA +L+G P +V+V + + + VE K R + Sbjct: 498 TASGIDVLYDDRDARPGVKFADMELIGIPHRVVVSPRAIQEGSVEYKGRQDADPTHVPRA 557 Query: 433 EVINYASHRFS 443 E++ + +R + Sbjct: 558 EIVTWLKNRLT 568 >gi|168235024|ref|ZP_02660082.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735941|ref|YP_002113265.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|204926680|ref|ZP_03217882.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|226701337|sp|B4TYF5|SYP_SALSV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|194711443|gb|ACF90664.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291887|gb|EDY31237.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204323345|gb|EDZ08540.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 572 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF----------SDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|300724773|ref|YP_003714098.1| proline tRNA synthetase [Xenorhabdus nematophila ATCC 19061] gi|297631315|emb|CBJ92010.1| proline tRNA synthetase [Xenorhabdus nematophila ATCC 19061] Length = 573 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 122/226 (53%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SHKLMLR GMI + + G+Y+W+P G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVVSHKLMLRAGMIRKLASGLYNWMPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW+ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWLESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+KM+ + Sbjct: 121 EVTSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDKMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+GL P+ A++G IGG SHEF VLA++GE + S + Sbjct: 181 YSKIFTRIGLDFRPVLADTGSIGGSASHEFQVLAESGEDDIVFSTE 226 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 76/186 (40%), Positives = 113/186 (60%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K + RGIEVGHIF GTKYS + AT + DG + V Sbjct: 380 PLPEIADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSDALKATVQNEDGHNQVV 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE SHD +GIIW D++APF+++++ + H ++ EK+YA Sbjct: 440 TMGCYGIGVTRIVAAAIEQSHDDRGIIWSDAIAPFQVAILPMNMHKSYRVKEVAEKLYAD 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV +DD E+ G FA +L+G P +++G + + + ++E K R TG ++ + L Sbjct: 500 LRASGIDVIFDDRKERPGVMFADMELIGVPHTLVIGDRNLDNGEIEYKCRRTGDKQMLKL 559 Query: 432 EEVINY 437 E +I Y Sbjct: 560 ESIIEY 565 >gi|192359534|ref|YP_001982928.1| prolyl-tRNA synthetase [Cellvibrio japonicus Ueda107] gi|190685699|gb|ACE83377.1| prolyl-tRNA synthetase [Cellvibrio japonicus Ueda107] Length = 611 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 125/224 (55%), Positives = 165/224 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ + L+E P DAE+ SH+LMLR GMI + + G+Y+WLPLG + L V I+REE Sbjct: 37 MRSSRFLIATLKETPADAEVISHQLMLRAGMIRKMASGLYNWLPLGLRVLRKVETIVREE 96 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA+E+ +P +Q A+LW ESGR+ YG E+LR+ DR+D+ GPTHEEV+TD+ R+ Sbjct: 97 MNKSGAMEVLMPVVQPAELWEESGRWQQYGPELLRITDRHDRPFCLGPTHEEVITDLIRN 156 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF LT E + +Y+ M + Sbjct: 157 ELKSYKQLPANFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHLTQESLQQTYDVMHTT 216 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL P+ A++G IGG SHEF VLAD+GE + S Sbjct: 217 YCNIFSRLGLGYRPVLADTGSIGGAYSHEFHVLADSGEDYIVFS 260 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 107/188 (56%), Gaps = 6/188 (3%) Query: 254 APYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 AP A D+ N D P K RGIEVGHIF GTKYS M A +GK+ Sbjct: 419 APLVA--DIRNVVTGDPSPCGKGTLEIKRGIEVGHIFQLGTKYSDAMKARVLDENGKEQT 476 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYA 370 + MG YGIG RVVAA IE + D GIIWPD++APF I+++ I A + CE++YA Sbjct: 477 MIMGCYGIGVTRVVAAAIEQNFDDNGIIWPDAIAPFHIAIVPINMAKSEAVATKCEELYA 536 Query: 371 RLSKVGCDVFW-DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +LS G DV D+ ++G A DL+G P +++VG + + +E K R ++++ Sbjct: 537 QLSAAGLDVLLMDEDKARLGVMLADTDLMGIPHRIVVGDRGLEAGSIEYKGRRDAEKQEI 596 Query: 430 SLEEVINY 437 ++ +++ + Sbjct: 597 AVGDIVEF 604 >gi|226327022|ref|ZP_03802540.1| hypothetical protein PROPEN_00883 [Proteus penneri ATCC 35198] gi|225204240|gb|EEG86594.1| hypothetical protein PROPEN_00883 [Proteus penneri ATCC 35198] Length = 571 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 138/303 (45%), Positives = 194/303 (64%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAEI SH+LMLR GMI + + G+Y W+P G + L + I+REE Sbjct: 1 MRTSHYLLSTLKETPADAEIVSHQLMLRAGMIRKLASGLYDWMPTGVRVLRKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G++E+S+P +Q ADLW+ESGR++ YG E+LR +DR ++ + GPTHEEV+TDI R+ Sbjct: 61 MDNAGSLEISMPVVQPADLWLESGRWEQYGPELLRFSDRGERPFVLGPTHEEVVTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF ++ E + +Y++M+ + Sbjct: 121 EITSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHISQESLQETYDRMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL P+ A++G IGG+ SHEF VLAD+GE + S +D+ Sbjct: 181 YSKIFSRIGLDFRPVLADTGSIGGNASHEFQVLADSGEDDIVFST----------GSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L V T AAT ++ +L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAVMPATPRTAATEEL---RLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 68/192 (35%), Positives = 116/192 (60%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K + RGIEVGHIF GTKYS + AT + +G + V Sbjct: 380 PVAEIADIRNVVEGDQSPDGKGTLLIKRGIEVGHIFQLGTKYSEALKATVQNEEGHNQIV 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIWPD++APF+++++ + H ++ +++Y Sbjct: 440 TMGCYGIGITRIVAAAIEQNHDARGIIWPDAIAPFQVAILPMNMHRSYRVKEVADRLYNE 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV +DD E+ G FA +L+G P +++G + + ++++E K R + + +++ Sbjct: 500 LRAQGIDVLFDDRKERPGVMFADMELIGIPHTIVIGDRNLDNNQIEYKARRSDDKSLVNV 559 Query: 432 EEVINYASHRFS 443 ++V+ + + + Sbjct: 560 DDVVAFIKEQLA 571 >gi|224582089|ref|YP_002635887.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254782914|sp|C0Q6L7|SYP_SALPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|224466616|gb|ACN44446.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 572 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF----------SDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P E + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGEGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGKKSLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|213648168|ref|ZP_03378221.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 306 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 193/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDI----------VFSDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 >gi|162139614|ref|YP_215228.2| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|114152248|sp|Q57T14|SYP_SALCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|322713265|gb|EFZ04836.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 572 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF----------SDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGKKSLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|322616066|gb|EFY12983.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620849|gb|EFY17709.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623800|gb|EFY20637.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627248|gb|EFY24039.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630555|gb|EFY27319.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638227|gb|EFY34928.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322645504|gb|EFY42031.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648203|gb|EFY44670.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322657523|gb|EFY53795.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663843|gb|EFY60043.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666676|gb|EFY62854.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672166|gb|EFY68278.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676523|gb|EFY72594.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679385|gb|EFY75430.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|323193468|gb|EFZ78676.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197510|gb|EFZ82645.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201221|gb|EFZ86290.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209616|gb|EFZ94549.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212132|gb|EFZ96956.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216437|gb|EGA01163.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223373|gb|EGA07708.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225934|gb|EGA10154.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228525|gb|EGA12654.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236862|gb|EGA20938.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239638|gb|EGA23685.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242315|gb|EGA26344.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249977|gb|EGA33873.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252407|gb|EGA36258.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255690|gb|EGA39443.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262873|gb|EGA46423.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265359|gb|EGA48855.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271854|gb|EGA55272.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 572 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF----------SDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|16759234|ref|NP_454851.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16763631|ref|NP_459246.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140783|ref|NP_804125.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412515|ref|YP_149590.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161612617|ref|YP_001586582.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167990131|ref|ZP_02571231.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230553|ref|ZP_02655611.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168245012|ref|ZP_02669944.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264654|ref|ZP_02686627.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464192|ref|ZP_02698095.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194449602|ref|YP_002044232.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472823|ref|ZP_03078807.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197264294|ref|ZP_03164368.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361450|ref|YP_002141086.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198242516|ref|YP_002214203.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386929|ref|ZP_03213541.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205351579|ref|YP_002225380.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855760|ref|YP_002242411.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213051828|ref|ZP_03344706.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428490|ref|ZP_03361240.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580835|ref|ZP_03362661.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213865222|ref|ZP_03387341.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|81821351|sp|Q5PD80|SYP_SALPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81832731|sp|Q7CR62|SYP_SALTY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81849080|sp|Q8XEY9|SYP_SALTI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189083511|sp|A9N0U7|SYP_SALPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701327|sp|B5FJ42|SYP_SALDC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701328|sp|B5R434|SYP_SALEP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701329|sp|B5R5J8|SYP_SALG2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701334|sp|B4TK70|SYP_SALHS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701336|sp|B5BAQ2|SYP_SALPK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|25293215|pir||AF0532 prolyl-tRNA synthetase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16418747|gb|AAL19205.1| proline tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501525|emb|CAD08702.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi] gi|29136407|gb|AAO67974.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56126772|gb|AAV76278.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161361981|gb|ABX65749.1| hypothetical protein SPAB_00308 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194407906|gb|ACF68125.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459187|gb|EDX48026.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195632930|gb|EDX51384.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197092926|emb|CAR58355.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197242549|gb|EDY25169.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197937032|gb|ACH74365.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604027|gb|EDZ02572.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205271360|emb|CAR36153.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205331403|gb|EDZ18167.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335202|gb|EDZ21966.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336220|gb|EDZ22984.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205346928|gb|EDZ33559.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707563|emb|CAR31837.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|267991932|gb|ACY86817.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156869|emb|CBW16345.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911213|dbj|BAJ35187.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225175|gb|EFX50235.1| Prolyl-tRNA synthetase ; Bacterial type [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323128562|gb|ADX15992.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326621946|gb|EGE28291.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326626606|gb|EGE32949.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987194|gb|AEF06177.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 572 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF----------SDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|168823087|ref|ZP_02835087.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205340609|gb|EDZ27373.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 572 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF----------SDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|301065031|ref|ZP_07205376.1| proline--tRNA ligase [delta proteobacterium NaphS2] gi|300440880|gb|EFK05300.1| proline--tRNA ligase [delta proteobacterium NaphS2] Length = 575 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 125/221 (56%), Positives = 163/221 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S YF+P +E P DAEI SH+LM+R GMI + + GIY++LP+G K++ V I+REE Sbjct: 1 MRYSSYFIPTKKEIPADAEIISHQLMIRAGMIRKLTSGIYTYLPVGLKSIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG+E+LR DR+D+ GPTHEEV+TD+ R Sbjct: 61 MNRAGAIEVLMPAVQPAELWQESGRWEYYGRELLRFKDRHDRDACMGPTHEEVITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ +P YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ SY M+ + Sbjct: 121 EIHSYKQMPINLYQIQTKFRDEIRPRFGIMRGREFIMKDAYSFDVDEAGANRSYEAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R GLK + A+SG IGG SHEF+VLAD+GE Q+ Sbjct: 181 YERIFQRCGLKFRAVEADSGTIGGSYSHEFMVLADSGEDQI 221 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/143 (46%), Positives = 91/143 (63%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIEVGH+F G KYS M A F GK+ + MG YGIG R VAA IE +HD GI Sbjct: 404 GRGIEVGHVFKLGVKYSEAMKALFLNEQGKELPMIMGCYGIGIGRTVAAAIEQNHDENGI 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 ++P VAPF++S++ ++ H+ +A +KIY L K G D DD E+ G +F ADLL Sbjct: 464 VFPIPVAPFEVSILPLQMHNDHVVNAADKIYEELMKSGIDALLDDRDERAGVKFNDADLL 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P+++ VGS+ + + +VE+K R Sbjct: 524 GIPVRITVGSRGLKNGEVEVKLR 546 >gi|295098681|emb|CBK87771.1| prolyl-tRNA synthetase, family II [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 572 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 133/277 (48%), Positives = 181/277 (65%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+KM+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDKMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S +F + Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANIEFAEALA 240 Query: 233 PSEN----------TDFDDIISLNSIVEQWTAPYAAT 259 P E D + ++ +VEQ+T P T Sbjct: 241 PKEPRGAATQEMTLVDTPNAKTIAELVEQFTLPIEKT 277 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 112/182 (61%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF G KYS M+A +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGKGTLMIKRGIEVGHIFQLGDKYSRAMNAAVQGEDGRNQVLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+YA LS Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDNIAPFQVAILPMNMHKSYRVQELAEKLYAELSAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +++G + + ++E K+R G ++ + +++ Sbjct: 504 GIDVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDSDEIEYKYRRNGEKQMIKTGDIL 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|78357249|ref|YP_388698.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|114152190|sp|Q30Z93|SYP_DESDG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78219654|gb|ABB39003.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 574 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 131/265 (49%), Positives = 183/265 (69%), Gaps = 9/265 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +++P L+E P DAE+ SHKL++R GMI + + GIY +LPLG ++++ +I+R+E Sbjct: 1 MRWSNFYIPTLKEAPADAEVVSHKLLIRAGMIRKLTSGIYIYLPLGLRSIEKAASIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ +P +Q ADLW ESGR+D YGKE+LR++DR+ + GPTHEEV+TD+ R Sbjct: 61 MNSAGAQELLMPMVQPADLWQESGRWDFYGKELLRISDRHGRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD +G SY M+ + Sbjct: 121 EVRSYRQLPLNLYQIQTKFRDEIRPRFGLMRGREFMMKDAYSFDRDAQGLDLSYRAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDF 239 Y++IF R+GLK + A+SG IGG SHEF+VLA+TGE T FC D+ S N + Sbjct: 181 YMKIFSRMGLKFRAVEADSGSIGGSFSHEFMVLAETGEDTIAFCHD--CDY---SANVER 235 Query: 240 DDIISLNSIVEQWTAPYAATSDVHN 264 +++ +++ AP A +VH Sbjct: 236 AEVV---CTLDECDAPVAGVEEVHT 257 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/153 (41%), Positives = 94/153 (61%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F GTKYS M F +GK+ + MG YGIG RVVAA IE + D GI+ Sbjct: 403 RGIEVGHVFKLGTKYSEAMGCKFLDENGKEQVMLMGCYGIGVSRVVAACIEQNSDENGIV 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +APF++ L+N+ + +++Y + GCDV DD E+ G +F ADL+G Sbjct: 463 FPPPIAPFEVLLLNLDGKNDDVNARVDELYGAVQAAGCDVLMDDRNERPGVKFKDADLIG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 P+Q++VG K ++ VE K R TG + ++ ++ Sbjct: 523 VPMQLVVGGKGLARGIVEAKDRRTGEKTELPVD 555 >gi|320540052|ref|ZP_08039708.1| prolyl-tRNA synthetase [Serratia symbiotica str. Tucson] gi|320029901|gb|EFW11924.1| prolyl-tRNA synthetase [Serratia symbiotica str. Tucson] Length = 570 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+ENP DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKENPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N AIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNANAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFG+MRSREFLMKDAYSF + + + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEVRPRFGIMRSREFLMKDAYSFHTSQDSLQVTYDAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL P+ A++G IGG SHEF VLAD+GE + S Sbjct: 181 YNKIFSRMGLDFRPVHADTGSIGGSASHEFQVLADSGEDDIVFS 224 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 75/190 (39%), Positives = 113/190 (59%), Gaps = 3/190 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 Q P +D+ N D+ P+ + + RGIEVGHIF GTKYS M AT +G DG+ Sbjct: 374 QRDLPLPQVADIRNVVEGDASPDGQGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGR 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA-CEK 367 + + MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H A E Sbjct: 434 NQVLTMGCYGIGVTRVVAAAIEQNHDERGIIWPDTIAPFQVAILPMNMHKSFRVQALAED 493 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y L G DV DD E+ G FA +L+G P +++G + + ++E K+R G ++ Sbjct: 494 LYTTLRSHGIDVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEIEYKNRRIGEKQ 553 Query: 428 DMSLEEVINY 437 + EE++N+ Sbjct: 554 MIKTEEIVNF 563 >gi|283835256|ref|ZP_06354997.1| proline--tRNA ligase [Citrobacter youngae ATCC 29220] gi|291068967|gb|EFE07076.1| proline--tRNA ligase [Citrobacter youngae ATCC 29220] Length = 572 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 191/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D D+ + N +F Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFS-DSSDY---AANIEFA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + AP A + E P N + A +E +++LP+ Sbjct: 237 EAV----------APKAPRAAATQEMTLVDTP-NAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKAAVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 444 YGIGVTRVVAAAIEQNYDDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|289830168|ref|ZP_06547590.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 282 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 193/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDI----------VFSDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 >gi|218703449|ref|YP_002410968.1| prolyl-tRNA synthetase [Escherichia coli UMN026] gi|293403264|ref|ZP_06647361.1| prolyl-tRNA synthetase [Escherichia coli FVEC1412] gi|293408287|ref|ZP_06652127.1| prolyl-tRNA synthetase [Escherichia coli B354] gi|298378800|ref|ZP_06988684.1| prolyl-tRNA synthetase [Escherichia coli FVEC1302] gi|300900763|ref|ZP_07118909.1| prolyl-tRNA synthetase [Escherichia coli MS 198-1] gi|301025919|ref|ZP_07189405.1| prolyl-tRNA synthetase [Escherichia coli MS 69-1] gi|331661569|ref|ZP_08362493.1| proline--tRNA ligase [Escherichia coli TA143] gi|226701283|sp|B7N862|SYP_ECOLU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218430546|emb|CAR11412.1| prolyl-tRNA synthetase [Escherichia coli UMN026] gi|284919970|emb|CBG33025.1| prolyl-tRNA synthetase [Escherichia coli 042] gi|291430179|gb|EFF03193.1| prolyl-tRNA synthetase [Escherichia coli FVEC1412] gi|291472538|gb|EFF15020.1| prolyl-tRNA synthetase [Escherichia coli B354] gi|298281134|gb|EFI22635.1| prolyl-tRNA synthetase [Escherichia coli FVEC1302] gi|300355748|gb|EFJ71618.1| prolyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300395774|gb|EFJ79312.1| prolyl-tRNA synthetase [Escherichia coli MS 69-1] gi|331061484|gb|EGI33447.1| proline--tRNA ligase [Escherichia coli TA143] gi|332341528|gb|AEE54862.1| prolyl-tRNA synthetase ProS [Escherichia coli UMNK88] Length = 572 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 112/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 564 Query: 437 Y 437 Y Sbjct: 565 Y 565 >gi|253689709|ref|YP_003018899.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259511609|sp|C6DDF6|SYP_PECCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|251756287|gb|ACT14363.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 572 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 125/226 (55%), Positives = 164/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLWVESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQVTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+ L ++A++G IGG+ SHEF VLA +GE + S D Sbjct: 181 YSQIFSRMDLDFRAVQADTGSIGGNASHEFQVLAASGEDDIVFSTD 226 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 109/182 (59%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF G+KYS + AT +G DG++ + MG Sbjct: 384 VADIRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GIIWPD++APF ++++ + H ++ E IY +L Sbjct: 444 YGIGVTRVVAAAIEQNHDERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + ++E KHR G ++ + E++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEIEYKHRRIGEKQMIKTNEIV 563 Query: 436 NY 437 ++ Sbjct: 564 DF 565 >gi|320180897|gb|EFW55819.1| prolyl-tRNA synthetase [Shigella boydii ATCC 9905] Length = 572 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 111/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVE 564 Query: 437 Y 437 Y Sbjct: 565 Y 565 >gi|254037614|ref|ZP_04871691.1| prolyl-tRNA synthetase [Escherichia sp. 1_1_43] gi|226840720|gb|EEH72722.1| prolyl-tRNA synthetase [Escherichia sp. 1_1_43] Length = 590 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 19 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 78 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 79 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 138 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 139 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 198 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 199 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 242 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 402 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 461 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 462 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 521 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 522 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 581 Query: 436 NY 437 Y Sbjct: 582 EY 583 >gi|194428300|ref|ZP_03060842.1| prolyl-tRNA synthetase [Escherichia coli B171] gi|194413675|gb|EDX29955.1| prolyl-tRNA synthetase [Escherichia coli B171] Length = 572 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/182 (35%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++ + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLSDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|262281159|ref|ZP_06058941.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] gi|262257390|gb|EEY76126.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] Length = 571 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 125/226 (55%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHANPFVLGPTHEEVITDMARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLASSGEDDIAFSTE 226 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 95/157 (60%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + G DGK V MG YGIG RVVAA IE ++D KGI+ Sbjct: 410 RGIEVGHIFQLGTKYSEALGCKVLGEDGKPFTVTMGCYGIGVTRVVAAAIEQNYDDKGIM 469 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF+I+++ + AH +A E +YA L G D+ DD E+ G +F+ +L+ Sbjct: 470 WPQAIAPFEIAIVPMNAHKSPRTLEAAESLYAELQAQGFDILLDDRNERPGVKFSDLELM 529 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++++G K + E K R +++ EE++ Sbjct: 530 GIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELL 566 >gi|309700402|emb|CBI99691.1| prolyl-tRNA synthetase [Escherichia coli ETEC H10407] Length = 572 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 111/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R ++ + ++++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNCEKQLIKTGDIVD 564 Query: 437 Y 437 Y Sbjct: 565 Y 565 >gi|300920118|ref|ZP_07136571.1| prolyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300412852|gb|EFJ96162.1| prolyl-tRNA synthetase [Escherichia coli MS 115-1] Length = 572 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 111/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVE 564 Query: 437 Y 437 Y Sbjct: 565 Y 565 >gi|260866343|ref|YP_003232745.1| prolyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|257762699|dbj|BAI34194.1| prolyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] Length = 572 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++I Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDII 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|194435019|ref|ZP_03067260.1| prolyl-tRNA synthetase [Shigella dysenteriae 1012] gi|300902015|ref|ZP_07120042.1| prolyl-tRNA synthetase [Escherichia coli MS 84-1] gi|301305332|ref|ZP_07211428.1| prolyl-tRNA synthetase [Escherichia coli MS 124-1] gi|331651100|ref|ZP_08352128.1| proline--tRNA ligase [Escherichia coli M718] gi|331671699|ref|ZP_08372497.1| proline--tRNA ligase [Escherichia coli TA280] gi|194416755|gb|EDX32883.1| prolyl-tRNA synthetase [Shigella dysenteriae 1012] gi|300405901|gb|EFJ89439.1| prolyl-tRNA synthetase [Escherichia coli MS 84-1] gi|300839437|gb|EFK67197.1| prolyl-tRNA synthetase [Escherichia coli MS 124-1] gi|315254998|gb|EFU34966.1| prolyl-tRNA synthetase [Escherichia coli MS 85-1] gi|331051554|gb|EGI23603.1| proline--tRNA ligase [Escherichia coli M718] gi|331071544|gb|EGI42901.1| proline--tRNA ligase [Escherichia coli TA280] gi|332095137|gb|EGJ00169.1| prolyl-tRNA synthetase [Shigella boydii 5216-82] gi|332097597|gb|EGJ02574.1| prolyl-tRNA synthetase [Shigella dysenteriae 155-74] Length = 572 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 111/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVE 564 Query: 437 Y 437 Y Sbjct: 565 Y 565 >gi|332282869|ref|ZP_08395282.1| prolyl-tRNA synthetase [Shigella sp. D9] gi|332105221|gb|EGJ08567.1| prolyl-tRNA synthetase [Shigella sp. D9] Length = 590 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 19 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 78 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 79 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 138 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 139 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 198 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 199 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 242 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 111/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 403 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 462 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 463 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 522 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 523 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVE 582 Query: 437 Y 437 Y Sbjct: 583 Y 583 >gi|218885229|ref|YP_002434550.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226699140|sp|B8DNM5|SYP_DESVM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218756183|gb|ACL07082.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 575 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 125/221 (56%), Positives = 161/221 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++P L+E P DAE+ SHKL+ R GMI + + GIY ++PLG KA++ AI+REE Sbjct: 1 MRWSNCYIPTLKEAPADAEVVSHKLLTRAGMIRKLTSGIYIYMPLGLKAIEKTAAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+S+P +Q ADLW ESGR++ YGKE+LR DRN + GPTHEEV+TD+ R Sbjct: 61 MNRAGALELSMPMVQPADLWQESGRWEFYGKELLRFQDRNGRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G+ SY M+ + Sbjct: 121 EVRSYRQLPINLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDRDEAGADKSYWAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y +F RLGL+ + A+SG IGG SHEF+VLADTGE + Sbjct: 181 YQNVFKRLGLRFRAVEADSGSIGGSFSHEFMVLADTGEDTI 221 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 69/153 (45%), Positives = 93/153 (60%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F GTKYS P+ TF DGK+ + MG YGIG RVVA+ IE +HD GI+ Sbjct: 404 RGIEVGHVFKLGTKYSEPLKCTFLDEDGKEKVMVMGCYGIGVSRVVASCIEQNHDADGIV 463 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +APF+ L + + E+ YA L G DV DD E+ G +F ADL+G Sbjct: 464 FPPPIAPFEAVLCCLDPKNGETLGKAEEFYAELKAQGVDVILDDRDERPGVKFKDADLVG 523 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 PLQ++VG K ++ VE K R TG + ++ +E Sbjct: 524 MPLQLVVGGKGLARGIVEAKDRRTGEKTELPVE 556 >gi|15799876|ref|NP_285888.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 EDL933] gi|15829450|ref|NP_308223.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|168752178|ref|ZP_02777200.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|168765280|ref|ZP_02790287.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|168769963|ref|ZP_02794970.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|168777697|ref|ZP_02802704.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|168782925|ref|ZP_02807932.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|168789305|ref|ZP_02814312.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|168802460|ref|ZP_02827467.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|195939891|ref|ZP_03085273.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024] gi|208809448|ref|ZP_03251785.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208812619|ref|ZP_03253948.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|208821168|ref|ZP_03261488.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042] gi|209398549|ref|YP_002268803.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|217324314|ref|ZP_03440398.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|254791327|ref|YP_003076164.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|261226949|ref|ZP_05941230.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000] gi|261255353|ref|ZP_05947886.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966] gi|291281017|ref|YP_003497835.1| Prolyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|81848971|sp|Q8X8W2|SYP_ECO57 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226731431|sp|B5Z0H4|SYP_ECO5E RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|12512925|gb|AAG54496.1|AE005195_5 proline tRNA synthetase [Escherichia coli O157:H7 str. EDL933] gi|13359652|dbj|BAB33619.1| proline tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|187767123|gb|EDU30967.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|188013912|gb|EDU52034.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|188999651|gb|EDU68637.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|189361055|gb|EDU79474.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|189364925|gb|EDU83341.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|189371068|gb|EDU89484.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|189375548|gb|EDU93964.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|208729249|gb|EDZ78850.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208733896|gb|EDZ82583.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|208741291|gb|EDZ88973.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042] gi|209159949|gb|ACI37382.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|209745624|gb|ACI71119.1| proline tRNA synthetase [Escherichia coli] gi|209745626|gb|ACI71120.1| proline tRNA synthetase [Escherichia coli] gi|209745628|gb|ACI71121.1| proline tRNA synthetase [Escherichia coli] gi|209745630|gb|ACI71122.1| proline tRNA synthetase [Escherichia coli] gi|209745632|gb|ACI71123.1| proline tRNA synthetase [Escherichia coli] gi|217320535|gb|EEC28959.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|254590727|gb|ACT70088.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|290760890|gb|ADD54851.1| Prolyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|320190279|gb|EFW64929.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212] gi|320640001|gb|EFX09586.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101] gi|320644771|gb|EFX13815.1| prolyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89] gi|320652927|gb|EFX21165.1| prolyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687] gi|320658315|gb|EFX26044.1| prolyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663625|gb|EFX30909.1| prolyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905] gi|320668938|gb|EFX35733.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61] gi|326339750|gb|EGD63558.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044] gi|326345084|gb|EGD68827.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125] Length = 572 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|191167053|ref|ZP_03028875.1| prolyl-tRNA synthetase [Escherichia coli B7A] gi|309796373|ref|ZP_07690782.1| prolyl-tRNA synthetase [Escherichia coli MS 145-7] gi|190902946|gb|EDV62673.1| prolyl-tRNA synthetase [Escherichia coli B7A] gi|308120077|gb|EFO57339.1| prolyl-tRNA synthetase [Escherichia coli MS 145-7] Length = 572 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|218693660|ref|YP_002401327.1| prolyl-tRNA synthetase [Escherichia coli 55989] gi|256021628|ref|ZP_05435493.1| prolyl-tRNA synthetase [Shigella sp. D9] gi|293476853|ref|ZP_06665261.1| prolyl-tRNA synthetase [Escherichia coli B088] gi|300921804|ref|ZP_07137964.1| prolyl-tRNA synthetase [Escherichia coli MS 182-1] gi|301325160|ref|ZP_07218690.1| prolyl-tRNA synthetase [Escherichia coli MS 78-1] gi|254782900|sp|B7LHA4|SYP_ECO55 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218350392|emb|CAU96077.1| prolyl-tRNA synthetase [Escherichia coli 55989] gi|291321306|gb|EFE60748.1| prolyl-tRNA synthetase [Escherichia coli B088] gi|300421799|gb|EFK05110.1| prolyl-tRNA synthetase [Escherichia coli MS 182-1] gi|300847966|gb|EFK75726.1| prolyl-tRNA synthetase [Escherichia coli MS 78-1] gi|323935035|gb|EGB31408.1| prolyl-tRNA synthetase [Escherichia coli E1520] Length = 572 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 111/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVE 564 Query: 437 Y 437 Y Sbjct: 565 Y 565 >gi|152968789|ref|YP_001333898.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166980131|sp|A6T4Z7|SYP_KLEP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150953638|gb|ABR75668.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 572 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 127/244 (52%), Positives = 173/244 (70%), Gaps = 4/244 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D D+ + N +F Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFS-DSSDY---AANIEFA 236 Query: 241 DIIS 244 + ++ Sbjct: 237 EAVA 240 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKAAVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+YA LS Sbjct: 444 YGIGVTRVVAAAIEQNFDDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELSAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|30061751|ref|NP_835922.1| prolyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|56479623|ref|NP_706140.2| prolyl-tRNA synthetase [Shigella flexneri 2a str. 301] gi|74310815|ref|YP_309234.1| prolyl-tRNA synthetase [Shigella sonnei Ss046] gi|82542793|ref|YP_406740.1| prolyl-tRNA synthetase [Shigella boydii Sb227] gi|157159661|ref|YP_001456979.1| prolyl-tRNA synthetase [Escherichia coli HS] gi|162139361|ref|YP_687766.2| prolyl-tRNA synthetase [Shigella flexneri 5 str. 8401] gi|170021452|ref|YP_001726406.1| prolyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|187730943|ref|YP_001878997.1| prolyl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|188494186|ref|ZP_03001456.1| prolyl-tRNA synthetase [Escherichia coli 53638] gi|193063143|ref|ZP_03044234.1| prolyl-tRNA synthetase [Escherichia coli E22] gi|193067639|ref|ZP_03048606.1| prolyl-tRNA synthetase [Escherichia coli E110019] gi|194439920|ref|ZP_03071982.1| prolyl-tRNA synthetase [Escherichia coli 101-1] gi|209917387|ref|YP_002291471.1| prolyl-tRNA synthetase [Escherichia coli SE11] gi|218552775|ref|YP_002385688.1| prolyl-tRNA synthetase [Escherichia coli IAI1] gi|253774778|ref|YP_003037609.1| prolyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160314|ref|YP_003043422.1| prolyl-tRNA synthetase [Escherichia coli B str. REL606] gi|256025507|ref|ZP_05439372.1| prolyl-tRNA synthetase [Escherichia sp. 4_1_40B] gi|260842426|ref|YP_003220204.1| prolyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|260853405|ref|YP_003227296.1| prolyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|293418080|ref|ZP_06660702.1| prolyl-tRNA synthetase [Escherichia coli B185] gi|297519907|ref|ZP_06938293.1| prolyl-tRNA synthetase [Escherichia coli OP50] gi|300820114|ref|ZP_07100286.1| prolyl-tRNA synthetase [Escherichia coli MS 107-1] gi|300825388|ref|ZP_07105464.1| prolyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300932153|ref|ZP_07147436.1| prolyl-tRNA synthetase [Escherichia coli MS 187-1] gi|300949771|ref|ZP_07163746.1| prolyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300956080|ref|ZP_07168404.1| prolyl-tRNA synthetase [Escherichia coli MS 175-1] gi|301028690|ref|ZP_07191910.1| prolyl-tRNA synthetase [Escherichia coli MS 196-1] gi|301646520|ref|ZP_07246394.1| prolyl-tRNA synthetase [Escherichia coli MS 146-1] gi|307136795|ref|ZP_07496151.1| prolyl-tRNA synthetase [Escherichia coli H736] gi|307311357|ref|ZP_07590999.1| prolyl-tRNA synthetase [Escherichia coli W] gi|331640649|ref|ZP_08341797.1| proline--tRNA ligase [Escherichia coli H736] gi|331666440|ref|ZP_08367321.1| proline--tRNA ligase [Escherichia coli TA271] gi|331680776|ref|ZP_08381435.1| proline--tRNA ligase [Escherichia coli H591] gi|81839318|sp|Q83MC8|SYP_SHIFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152250|sp|Q325U6|SYP_SHIBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152252|sp|Q3Z5G3|SYP_SHISS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148887036|sp|Q0T815|SYP_SHIF8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980120|sp|A7ZWE2|SYP_ECOHS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189083498|sp|B1IQE6|SYP_ECOLC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701281|sp|B7M1Z9|SYP_ECO8A RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701284|sp|B6HZR3|SYP_ECOSE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701339|sp|B2U338|SYP_SHIB3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|30039993|gb|AAP15727.1| proline tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|56383174|gb|AAN41847.2| proline tRNA synthetase [Shigella flexneri 2a str. 301] gi|73854292|gb|AAZ86999.1| proline tRNA synthetase [Shigella sonnei Ss046] gi|81244204|gb|ABB64912.1| proline tRNA synthetase [Shigella boydii Sb227] gi|157065341|gb|ABV04596.1| prolyl-tRNA synthetase [Escherichia coli HS] gi|169756380|gb|ACA79079.1| prolyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|187427935|gb|ACD07209.1| prolyl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|188489385|gb|EDU64488.1| prolyl-tRNA synthetase [Escherichia coli 53638] gi|192931051|gb|EDV83654.1| prolyl-tRNA synthetase [Escherichia coli E22] gi|192959051|gb|EDV89487.1| prolyl-tRNA synthetase [Escherichia coli E110019] gi|194421166|gb|EDX37191.1| prolyl-tRNA synthetase [Escherichia coli 101-1] gi|209910646|dbj|BAG75720.1| prolyl-tRNA synthase [Escherichia coli SE11] gi|218359543|emb|CAQ97083.1| prolyl-tRNA synthetase [Escherichia coli IAI1] gi|242376026|emb|CAQ30709.1| prolyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|253325822|gb|ACT30424.1| prolyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972215|gb|ACT37886.1| prolyl-tRNA synthetase [Escherichia coli B str. REL606] gi|253976424|gb|ACT42094.1| prolyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|257752054|dbj|BAI23556.1| prolyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|257757573|dbj|BAI29070.1| prolyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|281599550|gb|ADA72534.1| putative prolyl-tRNA synthetase [Shigella flexneri 2002017] gi|291430798|gb|EFF03796.1| prolyl-tRNA synthetase [Escherichia coli B185] gi|299878289|gb|EFI86500.1| prolyl-tRNA synthetase [Escherichia coli MS 196-1] gi|300317074|gb|EFJ66858.1| prolyl-tRNA synthetase [Escherichia coli MS 175-1] gi|300450836|gb|EFK14456.1| prolyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300460090|gb|EFK23583.1| prolyl-tRNA synthetase [Escherichia coli MS 187-1] gi|300522148|gb|EFK43217.1| prolyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300527328|gb|EFK48390.1| prolyl-tRNA synthetase [Escherichia coli MS 107-1] gi|301075273|gb|EFK90079.1| prolyl-tRNA synthetase [Escherichia coli MS 146-1] gi|306908336|gb|EFN38834.1| prolyl-tRNA synthetase [Escherichia coli W] gi|315059413|gb|ADT73740.1| prolyl-tRNA synthetase [Escherichia coli W] gi|315616320|gb|EFU96938.1| prolyl-tRNA synthetase [Escherichia coli 3431] gi|320173324|gb|EFW48527.1| prolyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112] gi|320186617|gb|EFW61342.1| prolyl-tRNA synthetase [Shigella flexneri CDC 796-83] gi|320200278|gb|EFW74864.1| prolyl-tRNA synthetase [Escherichia coli EC4100B] gi|323157966|gb|EFZ44068.1| prolyl-tRNA synthetase [Escherichia coli EPECa14] gi|323165899|gb|EFZ51681.1| prolyl-tRNA synthetase [Shigella sonnei 53G] gi|323170987|gb|EFZ56636.1| prolyl-tRNA synthetase [Escherichia coli LT-68] gi|323380028|gb|ADX52296.1| prolyl-tRNA synthetase [Escherichia coli KO11] gi|323939929|gb|EGB36127.1| prolyl-tRNA synthetase [Escherichia coli E482] gi|323945673|gb|EGB41722.1| prolyl-tRNA synthetase [Escherichia coli H120] gi|323959956|gb|EGB55603.1| prolyl-tRNA synthetase [Escherichia coli H489] gi|323970674|gb|EGB65930.1| prolyl-tRNA synthetase [Escherichia coli TA007] gi|324019415|gb|EGB88634.1| prolyl-tRNA synthetase [Escherichia coli MS 117-3] gi|324118316|gb|EGC12211.1| prolyl-tRNA synthetase [Escherichia coli E1167] gi|331040395|gb|EGI12602.1| proline--tRNA ligase [Escherichia coli H736] gi|331066651|gb|EGI38528.1| proline--tRNA ligase [Escherichia coli TA271] gi|331072239|gb|EGI43575.1| proline--tRNA ligase [Escherichia coli H591] gi|332762067|gb|EGJ92338.1| prolyl-tRNA synthetase [Shigella flexneri 2747-71] gi|332765044|gb|EGJ95272.1| prolyl-tRNA synthetase [Shigella flexneri K-671] gi|332768698|gb|EGJ98878.1| prolyl-tRNA synthetase [Shigella flexneri 2930-71] gi|333009265|gb|EGK28721.1| prolyl-tRNA synthetase [Shigella flexneri K-218] gi|333010690|gb|EGK30123.1| prolyl-tRNA synthetase [Shigella flexneri VA-6] gi|333011036|gb|EGK30455.1| prolyl-tRNA synthetase [Shigella flexneri K-272] gi|333021831|gb|EGK41080.1| prolyl-tRNA synthetase [Shigella flexneri K-227] gi|333022223|gb|EGK41462.1| prolyl-tRNA synthetase [Shigella flexneri K-304] Length = 572 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|291286279|ref|YP_003503095.1| prolyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290883439|gb|ADD67139.1| prolyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 570 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 133/258 (51%), Positives = 174/258 (67%), Gaps = 11/258 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYF+P L+E P DAE+ SHKLM R GMI + + GIYS+LPLG + V I+R+ Sbjct: 1 MRYSKYFIPTLREVPADAEVVSHKLMARAGMIKKVASGIYSYLPLGLVVIKKVEDIVRKC 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N A+E+ +P++Q A+LW ESGR+D YGKE+LR+ DR+++ YGPTHEEV TDI RS Sbjct: 61 MNEADAVELMMPSVQPAELWQESGRWDFYGKELLRIKDRHNREFCYGPTHEEVTTDIIRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ SY KM+ + Sbjct: 121 YINSYKALPVNLYQIQTKFRDEVRPRFGLMRGREFIMKDAYSFDMDDAGANISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF GL+ + A+SG IGG SHEF+VLA TGE DF I + D+ Sbjct: 181 YRRIFEMCGLRYKVVDADSGAIGGSFSHEFMVLASTGE----------DFVISCNSCDYS 230 Query: 241 DIISLNSIVEQWTAPYAA 258 + + V + T P++ Sbjct: 231 ANVE-KATVRKSTEPFSG 247 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 69/157 (43%), Positives = 98/157 (62%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF GTKYS M+A + DGK MG YGIG RVVAA IE +HD KGI+ Sbjct: 402 KGIEVGHIFKLGTKYSSSMNAMYLDKDGKRKPFVMGCYGIGITRVVAAAIEQNHDEKGIV 461 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++APFKI ++ + DQ + E IY L G +V DD E+ G +F A+L+G Sbjct: 462 WPVNLAPFKICVLPLAMKDQEVSETAENIYKDLINKGVEVLLDDRDERPGVKFNDAELIG 521 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 PL+V++G K ++ K+E+ R +G ++ +E ++ Sbjct: 522 IPLRVVIGKKTLAQGKIEVTVRASGESYEVDVEGCVD 558 >gi|325123334|gb|ADY82857.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 571 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 125/226 (55%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHTNPFVLGPTHEEVITDMARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTE 226 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 68/157 (43%), Positives = 95/157 (60%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + G DGK V MG YGIG RVVAA IE ++D KGII Sbjct: 410 RGIEVGHIFQLGTKYSEALGCKVLGEDGKPFTVTMGCYGIGVTRVVAAAIEQNYDDKGII 469 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF+I+++ + AH +A E +YA L G DV DD E+ G +F+ +L+ Sbjct: 470 WPQAIAPFEIAIVPMNAHKSPRTLEAAESLYAELQAQGFDVLLDDRNERPGVKFSDLELM 529 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++++G K + E K R +++ EE++ Sbjct: 530 GIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELL 566 >gi|149909734|ref|ZP_01898386.1| prolyl-tRNA synthetase [Moritella sp. PE36] gi|149807248|gb|EDM67203.1| prolyl-tRNA synthetase [Moritella sp. PE36] Length = 573 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GM+ + + G+Y+WLP G + L V I+REE Sbjct: 1 MRSSNYLLSTLKETPNDAEVISHQLMLRAGMVRRLASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E +P +Q ADLW E+GR D +G E+LR+ DR++++ + GPTHEEV+TDI R Sbjct: 61 MDKAGAVETLMPMVQPADLWQETGRIDKFGPELLRINDRHNRSFVLGPTHEEVITDIARK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF ++ E +YNKM + Sbjct: 121 EINSYKQLPLTLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHISDECLNDTYNKMHTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R+GL+ P+ A++G IGG +SHEF VLA++GE + S Sbjct: 181 YCNIFERIGLEYRPVLADTGSIGGAVSHEFHVLAESGEDDIVFS 224 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 69/159 (43%), Positives = 102/159 (64%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT+Y+ M A GK + MG YGIG R+VAA IE +HD GII Sbjct: 409 RGIEVGHIFQLGTQYAEAMKAGVLNMQGKQQIMTMGCYGIGVSRIVAAAIEQNHDENGII 468 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 W +S+AP+K+S+I + H ++A EKIYA L G +VF+DD E+ G FA ++L+ Sbjct: 469 WNESIAPYKVSIIPMNMHKSADVKEAAEKIYADLQAAGIEVFFDDRKERPGVMFADSELI 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P +I+G + + + VE K RLTG + ++++ +++ + Sbjct: 529 GIPHNIIIGDRSLKNGLVEHKLRLTGDKTEVAVADIVAH 567 >gi|254496505|ref|ZP_05109377.1| prolyl-tRNA synthase [Legionella drancourtii LLAP12] gi|254354272|gb|EET12935.1| prolyl-tRNA synthase [Legionella drancourtii LLAP12] Length = 577 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 166/224 (74%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL L+E P DAEI SH+LMLRTGMI + G+Y+W+PLG K L V I+REE Sbjct: 9 MRASQWFLATLKETPNDAEIVSHQLMLRTGMIRKLGSGLYTWMPLGLKVLRKVEHIVREE 68 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR ++E+ +P +Q A+LW E+GR++++G ++L + D N + YGPTHEEV+TDI R+ Sbjct: 69 MNRINSVELLMPAVQPAELWQETGRWETFGGQLLTMKDSNGREYCYGPTHEEVITDIMRN 128 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L E +++Y M+ + Sbjct: 129 ELQSYKQLPRCFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLNLESLQNTYKDMYQA 188 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R+GLK + A++G IGG SHEF VLAD+GE +F S Sbjct: 189 YCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLADSGEDLIFYS 232 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 69/178 (38%), Positives = 100/178 (56%), Gaps = 3/178 (1%) Query: 261 DVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N K D P+ K S RGIEVGH+F G KY+ M+A G+ + MG YG Sbjct: 391 DLRNVKEGDISPDGKGTLHSCRGIEVGHVFQLGDKYAKAMNAAVINEQGQLETMMMGCYG 450 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGC 377 +G RVVAA IE HD +GIIWP ++APF++ +I + H Q +D + +Y + G Sbjct: 451 LGITRVVAAAIEQHHDEQGIIWPSNIAPFQVVIIPLNGHKSQAVKDQADVLYKQFRNAGI 510 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DV DD E+ G+ FA DL+G P +++V + + + VE K R TG + + L + Sbjct: 511 DVLLDDRNERAGALFADHDLIGVPHRLVVSDRNLEQNCVEYKSRATGETKSLDLNTAV 568 >gi|293611014|ref|ZP_06693313.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826666|gb|EFF85032.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 571 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 125/226 (55%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHTNPFVLGPTHEEVITDMARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTE 226 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 68/157 (43%), Positives = 95/157 (60%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + G DGK V MG YGIG RVVAA IE ++D KGII Sbjct: 410 RGIEVGHIFQLGTKYSEALGCKVLGEDGKPFTVTMGCYGIGVTRVVAAAIEQNYDDKGII 469 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF+I+++ + AH +A E +YA L G DV DD E+ G +F+ +L+ Sbjct: 470 WPQAIAPFEIAIVPMNAHKSPRTLEAAESLYAELQAQGFDVLLDDRNERPGVKFSDLELM 529 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++++G K + E K R +++ EE++ Sbjct: 530 GIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELL 566 >gi|82775586|ref|YP_401933.1| prolyl-tRNA synthetase [Shigella dysenteriae Sd197] gi|114152251|sp|Q32JR3|SYP_SHIDS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81239734|gb|ABB60444.1| proline tRNA synthetase [Shigella dysenteriae Sd197] Length = 572 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|238893191|ref|YP_002917925.1| prolyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044] gi|238545507|dbj|BAH61858.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 572 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 127/244 (52%), Positives = 173/244 (70%), Gaps = 4/244 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D D+ + N +F Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFS-DSSDY---AANIEFA 236 Query: 241 DIIS 244 + ++ Sbjct: 237 EAVA 240 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 109/182 (59%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKAAVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y LS Sbjct: 444 YGIGVTRVVAAAIEQNFDDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYTELSAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|37524693|ref|NP_928037.1| prolyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|81834075|sp|Q7N8M7|SYP_PHOLL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|36784118|emb|CAE12987.1| prolyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 572 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 133/277 (48%), Positives = 179/277 (64%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SHKLMLR GMI + + G+Y+W+P G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVVSHKLMLRAGMIRKLASGLYNWMPTGIRVLKKVEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N TGAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNTGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T +QIQ KFRDE+RPRFGVMRSREFLMKDAYSF T + +Y+ M+ + Sbjct: 121 EVSSYKQLPLTLFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHATQTSLQETYDNMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-------------- 226 Y +IF R+GL + A++G IGG SHEF VLA +GE + S + Sbjct: 181 YSKIFTRIGLDFRAVLADTGSIGGSASHEFQVLAASGEDDIVFSTESNYAANIELAEAVA 240 Query: 227 -FMDFPIPSEN---TDFDDIISLNSIVEQWTAPYAAT 259 D +P+E+ D + ++ +VEQ+ P T Sbjct: 241 PAHDRAVPTEDMHLVDTPNAKTIAELVEQFNLPIEKT 277 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 78/191 (40%), Positives = 116/191 (60%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K + RGIEVGHIF GTKYS M AT +G DG + V Sbjct: 380 PVPEVADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSDAMKATVQGEDGHNQIV 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIWPD++APF+++++ + H ++ EK+YA Sbjct: 440 TMGCYGIGVTRIVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSYRVKEVAEKLYAD 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV +DD E+ G FA +L+G P V++G + + + +VE KHR ++ + L Sbjct: 500 LRASGIDVIFDDRKERPGVMFADMELIGVPHTVVIGDRNLDNGEVEYKHRRNDEKQMLKL 559 Query: 432 EEVINYASHRF 442 + V++Y + Sbjct: 560 DNVVDYLKQQL 570 >gi|157156008|ref|YP_001461365.1| prolyl-tRNA synthetase [Escherichia coli E24377A] gi|166980119|sp|A7ZHT6|SYP_ECO24 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157078038|gb|ABV17746.1| prolyl-tRNA synthetase [Escherichia coli E24377A] Length = 572 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRIGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|16128187|ref|NP_414736.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|89107075|ref|AP_000855.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110] gi|170079831|ref|YP_001729151.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|238899593|ref|YP_002925389.1| prolyl-tRNA synthetase [Escherichia coli BW2952] gi|34395980|sp|P16659|SYP_ECOLI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Global RNA synthesis factor; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701282|sp|B1XD64|SYP_ECODH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|259511593|sp|C4ZRT7|SYP_ECOBW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|1552770|gb|AAB08622.1| proline-tRNA ligase [Escherichia coli] gi|1786392|gb|AAC73305.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|85674379|dbj|BAA77870.2| prolyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110] gi|169887666|gb|ACB01373.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|238863283|gb|ACR65281.1| prolyl-tRNA synthetase [Escherichia coli BW2952] gi|260450602|gb|ACX41024.1| prolyl-tRNA synthetase [Escherichia coli DH1] gi|315134885|dbj|BAJ42044.1| prolyl-tRNA synthetase [Escherichia coli DH1] Length = 572 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P + + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|322657154|gb|EFY53437.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322686289|gb|EFY82273.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] Length = 277 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 125/230 (54%), Positives = 166/230 (72%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFS-DVSDY 229 >gi|299768873|ref|YP_003730899.1| prolyl-tRNA synthetase [Acinetobacter sp. DR1] gi|298698961|gb|ADI89526.1| prolyl-tRNA synthetase [Acinetobacter sp. DR1] Length = 571 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 125/226 (55%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHTNPFVLGPTHEEVITDMARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTE 226 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/157 (42%), Positives = 95/157 (60%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + G DGK V MG YGIG RVVAA IE ++D KGI+ Sbjct: 410 RGIEVGHIFQLGTKYSEALGCKVLGEDGKPFTVTMGCYGIGVTRVVAAAIEQNYDDKGIM 469 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF+I+++ + AH +A E +YA L G DV DD E+ G +F+ +L+ Sbjct: 470 WPQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDVLLDDRNERPGVKFSDLELM 529 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++++G K + E K R +++ EE++ Sbjct: 530 GIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELL 566 >gi|261245474|emb|CBG23264.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 572 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 138/303 (45%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLVSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S+ +D+ Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF----------SDVSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T AAT ++ L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAIAPQTPRAAATQEM---TLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|329996732|ref|ZP_08302530.1| proline--tRNA ligase [Klebsiella sp. MS 92-3] gi|328539331|gb|EGF65355.1| proline--tRNA ligase [Klebsiella sp. MS 92-3] Length = 572 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 127/244 (52%), Positives = 173/244 (70%), Gaps = 4/244 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D D+ + N +F Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFS-DSSDY---AANIEFA 236 Query: 241 DIIS 244 + ++ Sbjct: 237 EAVA 240 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKAAVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+YA LS Sbjct: 444 YGIGVTRVVAAAIEQNFDDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELSAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|253988145|ref|YP_003039501.1| prolyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779595|emb|CAQ82756.1| prolyl-tRNA synthetase [Photorhabdus asymbiotica] Length = 574 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 125/226 (55%), Positives = 163/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SHKLMLR GMI + + G+Y+W+P G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVVSHKLMLRAGMIRKLASGLYNWMPTGIRVLKKVEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFADRGDRPFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T +QIQ KFRDE+RPRFGVMRSREFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLTLFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQESLQETYDNMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+GL + A++G IGG SHEF VLA +GE + S + Sbjct: 181 YSKIFTRIGLDFRAVLADTGSIGGSASHEFQVLAASGEDDIVFSTE 226 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 74/191 (38%), Positives = 115/191 (60%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K + RGIEVGHIF GTKYS M AT +G DG + + Sbjct: 380 PIPEIADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSDAMKATVQGEDGHNQII 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIWPD++APF+++++ + H ++ EK+YA Sbjct: 440 TMGCYGIGVTRIVAAAIEQNHDNRGIIWPDAIAPFQVAILPMNMHKSYRVKEIAEKLYAD 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV +DD E+ G FA +L+G P +++G + + +VE K+R ++ + L Sbjct: 500 LRACGIDVIFDDRKERPGVMFADMELIGVPHTIVIGDRNLDSGEVEYKYRRCDDKQMLKL 559 Query: 432 EEVINYASHRF 442 + V+++ + Sbjct: 560 DCVVDHLKQQL 570 >gi|50122450|ref|YP_051617.1| prolyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] gi|81827028|sp|Q6D1B9|SYP_ERWCT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|49612976|emb|CAG76427.1| prolyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] Length = 572 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 164/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLWVESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQATYDTMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+ L ++A++G IGG+ SHEF VLA +GE + S + Sbjct: 181 YSKIFSRMDLDFRAVQADTGSIGGNASHEFQVLASSGEDDIVFSTE 226 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 109/182 (59%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF G+KYS + AT +G DG++ + MG Sbjct: 384 VADIRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GIIWPD++APF ++++ + H ++ E IY +L Sbjct: 444 YGIGVTRVVAAAIEQNNDERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + ++E K+R G ++ + E+I Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEIEYKNRRVGEKQMIKTSEII 563 Query: 436 NY 437 ++ Sbjct: 564 DF 565 >gi|186477394|ref|YP_001858864.1| prolyl-tRNA synthetase [Burkholderia phymatum STM815] gi|226699127|sp|B2JHD3|SYP_BURP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|184193853|gb|ACC71818.1| prolyl-tRNA synthetase [Burkholderia phymatum STM815] Length = 578 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 130/229 (56%), Positives = 169/229 (73%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQSDFVIGPTHEEVVTDIARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQ+Q KFRDE+RPRFGVMR REF+MKDAYSFD +G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQVQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDMDGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF RLGL + A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIADTGEDDIAYCPTSDF 229 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 104/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+ATF GK + Sbjct: 382 PEPVVADIRNVKKDDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMNATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 QMG YGIG R++ A IE + D KGIIWP+S+APF++ L + +D+ R+ +K++ Sbjct: 442 QMGCYGIGITRILGAAIEQNFDDKGIIWPESIAPFEVVLCPM-GYDRSDAVREQADKLHD 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 501 ELTAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 551 >gi|237729500|ref|ZP_04559981.1| prolyl-tRNA synthetase [Citrobacter sp. 30_2] gi|226909229|gb|EEH95147.1| prolyl-tRNA synthetase [Citrobacter sp. 30_2] Length = 590 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 127/244 (52%), Positives = 174/244 (71%), Gaps = 4/244 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 19 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 78 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D++ + GPTHEEV+TD+ R+ Sbjct: 79 MNNAGAIEVLMPVVQPSELWEESGRWEQYGPELLRIADRGDRSFVLGPTHEEVITDLIRN 138 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 139 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 198 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D D+ + N +F Sbjct: 199 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFS-DSSDY---AANIEFA 254 Query: 241 DIIS 244 + ++ Sbjct: 255 EAVA 258 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + MG Sbjct: 402 VADIRNVVAGDPSPDGKGTLMIKRGIEVGHIFQLGTKYSEAMKAAVQGEDGRNQTLTMGC 461 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 462 YGIGVTRVVAAAIEQNFDDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQ 521 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G +E + +++ Sbjct: 522 GIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKELIKTGDIV 581 Query: 436 NY 437 ++ Sbjct: 582 DF 583 >gi|261822741|ref|YP_003260847.1| prolyl-tRNA synthetase [Pectobacterium wasabiae WPP163] gi|261606754|gb|ACX89240.1| prolyl-tRNA synthetase [Pectobacterium wasabiae WPP163] Length = 572 Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 164/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLWVESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQTTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+ L ++A++G IGG+ SHEF VLA +GE + S + Sbjct: 181 YSKIFSRMDLDFRAVQADTGSIGGNASHEFQVLATSGEDDIVFSTE 226 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 109/182 (59%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF G+KYS + AT +G DG++ + MG Sbjct: 384 VADIRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GIIWPD++APF ++++ + H ++ E IY +L Sbjct: 444 YGIGVTRVVAAAIEQNHDERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + ++E K+R G ++ + E+I Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEIEYKNRRIGEKQMIKTGEII 563 Query: 436 NY 437 ++ Sbjct: 564 DF 565 >gi|323527403|ref|YP_004229556.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1001] gi|323384405|gb|ADX56496.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1001] Length = 578 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 130/229 (56%), Positives = 168/229 (73%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQSDFVIGPTHEEVVTDIARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF RLGL + A++G IGG SHEF V+A+TGE + +C + DF Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPTSDF 229 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 102/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+AT +GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVLDICRGIEVGHVFQLGTKYSEAMNATCLDENGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YG+G R++ A IE + D KGIIWP+S+APF++ L + + R+ +K+YA Sbjct: 442 EMGCYGVGITRILGAAIEQNFDEKGIIWPESIAPFEVVLCPMGYDRSEAVREQADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G FA +L+G P ++++G + + + K+E + R Sbjct: 502 LVDAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKEGKLEYQGR 551 >gi|288937023|ref|YP_003441082.1| prolyl-tRNA synthetase [Klebsiella variicola At-22] gi|288891732|gb|ADC60050.1| prolyl-tRNA synthetase [Klebsiella variicola At-22] Length = 572 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 127/244 (52%), Positives = 173/244 (70%), Gaps = 4/244 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D D+ + N +F Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFS-DSSDY---AANIEFA 236 Query: 241 DIIS 244 + ++ Sbjct: 237 EAVA 240 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 71/182 (39%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF GTKYS M+A +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSQAMNAAVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GIIWPD++APF+++++ + H ++ EK+YA L Sbjct: 444 YGIGVTRVVAAAIEQNFDDRGIIWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAH 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIDVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|261338808|ref|ZP_05966666.1| hypothetical protein ENTCAN_05003 [Enterobacter cancerogenus ATCC 35316] gi|288318631|gb|EFC57569.1| proline--tRNA ligase [Enterobacter cancerogenus ATCC 35316] Length = 572 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+KM+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D D+ + N +F Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFS-DSSDY---AANIEFA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + AP A + E P N + A +E +++LP+ Sbjct: 237 EAL----------APKAPRAAATEEMTLVDTP-NAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF G KYS M+A +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLMIKRGIEVGHIFQLGDKYSRAMNAAVQGEDGRNQVLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 444 YGIGVTRVVAAAIEQNFDERGIVWPDNIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +++G + + ++E K+R +G ++ + +++ Sbjct: 504 GVDVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDSDEIEYKYRRSGEKQMIKTGDIL 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|206579512|ref|YP_002240318.1| prolyl-tRNA synthetase [Klebsiella pneumoniae 342] gi|226701300|sp|B5Y1H7|SYP_KLEP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|206568570|gb|ACI10346.1| prolyl-tRNA synthetase [Klebsiella pneumoniae 342] Length = 572 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 127/244 (52%), Positives = 173/244 (70%), Gaps = 4/244 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D D+ + N +F Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFS-DSSDY---AANIEFA 236 Query: 241 DIIS 244 + ++ Sbjct: 237 EAVA 240 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 71/182 (39%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF GTKYS M+A +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSQAMNAAVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GIIWPD++APF+++++ + H ++ EK+YA L Sbjct: 444 YGIGVTRVVAAAIEQNFDDRGIIWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAH 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIDVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|157371993|ref|YP_001479982.1| prolyl-tRNA synthetase [Serratia proteamaculans 568] gi|166980154|sp|A8GIB4|SYP_SERP5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157323757|gb|ABV42854.1| prolyl-tRNA synthetase [Serratia proteamaculans 568] Length = 572 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 141/303 (46%), Positives = 188/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N AIE+ +P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNANAIEVCMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y M+ + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQATYEAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL P+ A++G IGG SHEF VLAD+GE + S +DF Sbjct: 181 YSKIFSRMGLDFRPVHADTGSIGGSASHEFQVLADSGEDDIVFST----------GSDFA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L V P AA S+ ++ D+ N + A +E ++ LP++ Sbjct: 231 ANIELAEAVAP-AEPRAAASE--ELRIVDT--PNAKTIAELVE---------QFQLPVTK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 75/186 (40%), Positives = 112/186 (60%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K + RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQVADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA-CEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H A E++Y Sbjct: 440 TMGCYGIGVTRVVAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYNT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + ++E K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHSIVIGDRNLDSEEIEYKNRRVGEKQMIKT 559 Query: 432 EEVINY 437 EVI++ Sbjct: 560 GEVIDF 565 >gi|313672947|ref|YP_004051058.1| prolyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312939703|gb|ADR18895.1| prolyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 572 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 129/239 (53%), Positives = 170/239 (71%), Gaps = 10/239 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYF+P L+ENP DAE+ SHKLM+R GMI + + GIY++LP+G + + V IIR+ Sbjct: 1 MRLSKYFVPTLRENPSDAEVVSHKLMVRAGMIRKVAAGIYNYLPMGLRVIRKVENIIRKY 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P + A+LW ESGR++ YGKE+LR DR+D+ GPTHEEV+TDI R+ Sbjct: 61 MNEAGAIEILMPAVVPAELWKESGRWNVYGKELLRFKDRHDRDFCMGPTHEEVVTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY++LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ EG++ SY M + Sbjct: 121 EIKSYKDLPVNLYQIQTKFRDEVRPRFGLMRGREFIMKDAYSFDVDDEGAEKSYGLMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y +IF GLK + A+SG IGG+ SHEF+V A+TGE DF I ++ D+ Sbjct: 181 YCKIFESCGLKYKVVEADSGAIGGNFSHEFMVTAETGE----------DFVISCDSCDY 229 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 135/258 (52%), Gaps = 18/258 (6%) Query: 195 MRAESGPIG--GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 ++A +GP+G G + + AD K ++ + D I L ++ Sbjct: 323 VKATNGPLGFSGPIGINVKIYADNA------VKKLKNYVVGGNEKD----IHLINVNHTR 372 Query: 253 TAPYAATSDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A SD N K D P+ V +GIEVGHIF GTKYS M+AT+ DGK Sbjct: 373 DFKVTAFSDFINAKPGDKCPKCGGTYVITKGIEVGHIFKLGTKYSKSMNATYLDKDGKQQ 432 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 Y+ MG YGIG R AA IE +HD KGIIWP +APF++ +I I D+ + E +Y Sbjct: 433 YIVMGCYGIGVGRTAAAAIEQNHDEKGIIWPIQIAPFEVVIIPINTDDEDVVNLSETLYK 492 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG----IR 426 +L K +V DD E+ G +F ADL+G+P++V +G K + + +VEI R TG + Sbjct: 493 KLLKKNVEVIIDDRNERAGVKFNDADLVGYPIRVNIGKKTLENGEVEIVIRKTGDKINCK 552 Query: 427 EDMSLEEVINYASHRFSN 444 +D +L E++ ++N Sbjct: 553 KDDALSEILRIREELYNN 570 >gi|95930704|ref|ZP_01313437.1| prolyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] gi|95133184|gb|EAT14850.1| prolyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] Length = 571 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 127/239 (53%), Positives = 168/239 (70%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y LP L+ENP DAEI SH+LM+R GMI + + GIY++LPLG +++ V I+REE Sbjct: 1 MRLTEYLLPTLKENPADAEIVSHQLMMRAGMIRKVAAGIYTYLPLGLRSIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P + A LW ESGR++ YGKE+LR+ DR D GPTHEEV+TD+ R Sbjct: 61 MDRAGAMELLMPMVVPAGLWEESGRWEQYGKELLRIRDRKDTEFCLGPTHEEVITDVVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFDL G+ +Y KM+ + Sbjct: 121 TVRSYRQLPLNLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDLEDAGADTAYEKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y RIF R GLK + A++G IGG SHEF+VLA++GE + S D D+ E Sbjct: 181 YQRIFKRCGLKFRAVEADTGNIGGSSSHEFMVLAESGEDAIV-SCDQCDYAANVEKAQM 238 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/158 (40%), Positives = 99/158 (62%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F GTKYS + AT A+GK+ + MG YGIG R VAA IE +HD +G+I Sbjct: 403 RGIEVGHVFKLGTKYSEALGATVLNAEGKEAPLVMGCYGIGIGRTVAAAIEQNHDDQGVI 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +APF++ + + D+ A ++Y +L G +V DD E+ GS+F A+L+G Sbjct: 463 FPMPIAPFQVIITLLNPKDEQVMQAGSELYQQLMDAGVEVLLDDRDERPGSKFKDAELIG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 P++V VG++ + + E++ RL G R M + E +++ Sbjct: 523 IPIRVTVGNRALKEGAFEVQKRLEGERMMMPVAETLSW 560 >gi|170695316|ref|ZP_02886462.1| prolyl-tRNA synthetase [Burkholderia graminis C4D1M] gi|170139716|gb|EDT07898.1| prolyl-tRNA synthetase [Burkholderia graminis C4D1M] Length = 578 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 130/229 (56%), Positives = 168/229 (73%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQSDFVIGPTHEEVVTDIARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF RLGL + A++G IGG SHEF V+A+TGE + +C + DF Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPTSDF 229 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 112/198 (56%), Gaps = 11/198 (5%) Query: 229 DFPIPSENTDFDDIISLNSIVEQW--TAPYAATSDVHNEKLFDSLPENKRVS--ARGIEV 284 DF + S DF ++ W P +D+ + K D P+ K V RGIEV Sbjct: 360 DFVVGSNEVDF------HTTGVNWGRDLPEPVVADIRDVKKGDPSPDGKGVLDICRGIEV 413 Query: 285 GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 GH+F GTKYS M+AT +GK ++MG YG+G R++ A IE + D KGIIWP+S+ Sbjct: 414 GHVFQLGTKYSEAMNATCLDENGKPQPMEMGCYGVGITRILGAAIEQNFDDKGIIWPESI 473 Query: 345 APFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ 403 APF++ L + + R+ +K+YA L + G DV DD GE+ G FA +L+G P + Sbjct: 474 APFEVVLCPMGYDRSEAVREQADKLYAELVEAGIDVILDDRGERPGVMFADWELIGVPHR 533 Query: 404 VIVGSKFVSDSKVEIKHR 421 +++G + + + K+E + R Sbjct: 534 LVIGDRGLKEGKLEYQGR 551 >gi|296101364|ref|YP_003611510.1| prolyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055823|gb|ADF60561.1| prolyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 572 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 128/244 (52%), Positives = 173/244 (70%), Gaps = 4/244 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+KM+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSHESLQETYDKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D D+ + N +F Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFS-DSSDY---AANIEFA 236 Query: 241 DIIS 244 + ++ Sbjct: 237 EALA 240 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 112/182 (61%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF G KYS ++A +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLMIKRGIEVGHIFQLGDKYSRALNAAVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDNIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + ++E K+R +G ++ + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDSDEIEYKYRRSGEKQMIKTGDIL 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|227327749|ref|ZP_03831773.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 572 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 164/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLWVESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQVTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+ L ++A++G IGG+ SHEF VLA +GE + S + Sbjct: 181 YSKIFSRMDLDFRAVQADTGSIGGNASHEFQVLATSGEDDIVFSTE 226 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 109/181 (60%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K RGIEVGHIF G+KYS + AT +G DG++ + MG Y Sbjct: 385 ADIRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE +HD +GIIWPD++APF ++++ + H ++ E IY +L G Sbjct: 445 GIGVTRVVAAAIEQNHDERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAKG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + ++E K+R G ++ + E+I+ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEIEYKNRRGGEKQMIKTSEIID 564 Query: 437 Y 437 + Sbjct: 565 F 565 >gi|227114059|ref|ZP_03827715.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 572 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 164/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLWVESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQVTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+ L ++A++G IGG+ SHEF VLA +GE + S + Sbjct: 181 YSKIFSRMDLDFRAVQADTGSIGGNASHEFQVLATSGEDDIVFSTE 226 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 109/182 (59%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF G+KYS + AT +G DG++ + MG Sbjct: 384 VADIRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GIIWPD++APF ++++ + H ++ E IY +L Sbjct: 444 YGIGVTRVVAAAIEQNHDERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + ++E K+R G ++ + E+I Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEIEYKNRRVGEKQMIKTSEII 563 Query: 436 NY 437 ++ Sbjct: 564 DF 565 >gi|296160514|ref|ZP_06843330.1| prolyl-tRNA synthetase [Burkholderia sp. Ch1-1] gi|295889263|gb|EFG69065.1| prolyl-tRNA synthetase [Burkholderia sp. Ch1-1] Length = 578 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 129/229 (56%), Positives = 170/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQSDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQ+Q KFRDE+RPRFGVMR REF+MKDAYSFD +G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQVQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDMDGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF RLGL + A++G IGG SHEF V+A+TGE + +C + DF Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPTSDF 229 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/170 (41%), Positives = 103/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+AT GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMNATCLDETGKPRPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D +GIIWP+S+APF++ L + + R+A +K+YA Sbjct: 442 EMGCYGIGVTRILGAAIEQNFDDRGIIWPESIAPFEVVLCPMGYDRSEAVREAADKLYAT 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L + G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 502 LVEAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKDGKLEYQGR 551 >gi|290512444|ref|ZP_06551810.1| prolyl-tRNA synthetase [Klebsiella sp. 1_1_55] gi|289774785|gb|EFD82787.1| prolyl-tRNA synthetase [Klebsiella sp. 1_1_55] Length = 583 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 127/244 (52%), Positives = 173/244 (70%), Gaps = 4/244 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 12 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 71 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 72 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 131 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 132 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYTA 191 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D D+ + N +F Sbjct: 192 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFS-DSSDY---AANIEFA 247 Query: 241 DIIS 244 + ++ Sbjct: 248 EAVA 251 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 71/182 (39%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF GTKYS M+A +G DG++ + MG Sbjct: 395 VADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSQAMNAAVQGEDGRNQILTMGC 454 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GIIWPD++APF+++++ + H ++ EK+YA L Sbjct: 455 YGIGVTRVVAAAIEQNFDDRGIIWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAH 514 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 515 GIDVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 574 Query: 436 NY 437 Y Sbjct: 575 EY 576 >gi|91785266|ref|YP_560472.1| prolyl-tRNA synthetase [Burkholderia xenovorans LB400] gi|123358448|sp|Q13U19|SYP_BURXL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91689220|gb|ABE32420.1| Prolyl-tRNA synthetase [Burkholderia xenovorans LB400] Length = 578 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 129/229 (56%), Positives = 170/229 (74%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQSDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQ+Q KFRDE+RPRFGVMR REF+MKDAYSFD +G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQVQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDMDGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF RLGL + A++G IGG SHEF V+A+TGE + +C + DF Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPTSDF 229 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/170 (41%), Positives = 103/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+AT GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMNATCLDETGKPRPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D +GIIWP+S+APF++ L + + R+A +K+YA Sbjct: 442 EMGCYGIGVTRILGAAIEQNFDDRGIIWPESIAPFEVVLCPMGYDRSEAVREAADKLYAT 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L + G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 502 LLEAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKDGKLEYQGR 551 >gi|323964912|gb|EGB60378.1| prolyl-tRNA synthetase [Escherichia coli M863] gi|327255174|gb|EGE66777.1| prolyl-tRNA synthetase [Escherichia coli STEC_7v] Length = 572 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 112/182 (61%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|226951685|ref|ZP_03822149.1| prolyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] gi|294651367|ref|ZP_06728686.1| proline--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] gi|226837601|gb|EEH69984.1| prolyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] gi|292822769|gb|EFF81653.1| proline--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] Length = 571 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 124/226 (54%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+YSWLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYSWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGR++ YG E+LR DR++ + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGALEVFMPVTQPAALWEESGRFEQYGPELLRFKDRHNNDFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF E + +Y+ M+ + Sbjct: 121 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHANQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YSRIFSRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTE 226 Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 73/184 (39%), Positives = 101/184 (54%), Gaps = 3/184 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A + D+ N D P+ K RGIEVGHIF GTKYS + G DGK Sbjct: 382 ATFTEVYDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEALGCKVLGEDGKPFT 441 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYA 370 V MG YGIG RVVAA IE + D KGIIWP ++APF ++++ + AH +A E +YA Sbjct: 442 VTMGCYGIGVTRVVAAAIEQNFDDKGIIWPQAIAPFDVAIVPMNAHKSPRTVEAAEALYA 501 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G DV DD E+ G +F+ +L+G P ++++G K + E K R +++ Sbjct: 502 ELQAQGYDVLLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEASNLN 561 Query: 431 LEEV 434 EE+ Sbjct: 562 KEEL 565 >gi|116515089|ref|YP_802718.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256943|gb|ABJ90625.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 422 Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 153/424 (36%), Positives = 235/424 (55%), Gaps = 27/424 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M KY L L+E P++ E SH+LMLR+GMI S GIY+WLP G + + + II Sbjct: 1 MYTKKYLLSTLKEKPKNIESISHQLMLRSGMIRMLSSGIYTWLPTGYRIIKKITKIISSI 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G +E+ +P +Q +LW +SGR YG+E++++ DR +K + PTHEE + I + Sbjct: 61 LNNHGCMEICMPIIQPENLWKKSGRKKLYGEELIKITDRRNKKYVLSPTHEEAINYICQQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP TFYQIQ KFRDE+RPRFGV+R+ EFLMKDAYSF + + K +Y M Sbjct: 121 EIHSYKQLPITFYQIQKKFRDEIRPRFGVIRTIEFLMKDAYSFHINKDSLKKTYENMKNI 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF +L L ++A S +GG +S EF +++ GE ++ K N F+ Sbjct: 181 YIKIFKKLKLNFKIVKAHSKIMGGSISDEFHAISEMGENKIIFLK--------KSNYAFN 232 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL-PENKRVSARGIEVGHIFYFGTKYSLPMS 299 Y ++ + L E K + IE+GHIF KYS + Sbjct: 233 ---------------YNEFNEKKKKFKNYLLQKEKKLIKKNSIEIGHIFQIEKKYSKNTN 277 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAH 357 + K + MG YGIG R+++++IE +HD GIIWP+ +APF++ + IN+ + Sbjct: 278 FYIQDKKNKKKLLNMGCYGIGINRIISSIIEQNHDKYGIIWPNCIAPFQVFILPINMYKN 337 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ + A + ++K DV +D+ E +G FA +L+G P +++ ++ KVE Sbjct: 338 KKIKKIAKKLYKKLINK-NIDVLFDNRNESLGKMFADMNLIGIPFGILISKNTITSKKVE 396 Query: 418 IKHR 421 + R Sbjct: 397 LYSR 400 >gi|306815206|ref|ZP_07449355.1| prolyl-tRNA synthetase [Escherichia coli NC101] gi|305850868|gb|EFM51323.1| prolyl-tRNA synthetase [Escherichia coli NC101] Length = 572 Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 112/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGSLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 564 Query: 437 Y 437 Y Sbjct: 565 Y 565 >gi|218547650|ref|YP_002381441.1| prolyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|226701288|sp|B7LW79|SYP_ESCF3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218355191|emb|CAQ87798.1| prolyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|323975637|gb|EGB70733.1| prolyl-tRNA synthetase [Escherichia coli TW10509] Length = 572 Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 112/182 (61%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 +Y Sbjct: 564 DY 565 >gi|110640415|ref|YP_668143.1| prolyl-tRNA synthetase [Escherichia coli 536] gi|117622479|ref|YP_851392.1| prolyl-tRNA synthetase [Escherichia coli APEC O1] gi|161486316|ref|NP_752183.2| prolyl-tRNA synthetase [Escherichia coli CFT073] gi|162138494|ref|YP_539251.2| prolyl-tRNA synthetase [Escherichia coli UTI89] gi|170680577|ref|YP_001742323.1| prolyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|191171415|ref|ZP_03032964.1| prolyl-tRNA synthetase [Escherichia coli F11] gi|215485356|ref|YP_002327787.1| prolyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|218557136|ref|YP_002390049.1| prolyl-tRNA synthetase [Escherichia coli S88] gi|218688070|ref|YP_002396282.1| prolyl-tRNA synthetase [Escherichia coli ED1a] gi|227884892|ref|ZP_04002697.1| proline--tRNA ligase [Escherichia coli 83972] gi|300977725|ref|ZP_07174019.1| prolyl-tRNA synthetase [Escherichia coli MS 45-1] gi|300990442|ref|ZP_07179210.1| prolyl-tRNA synthetase [Escherichia coli MS 200-1] gi|301046653|ref|ZP_07193784.1| prolyl-tRNA synthetase [Escherichia coli MS 185-1] gi|331661266|ref|ZP_08362198.1| proline--tRNA ligase [Escherichia coli TA206] gi|331681580|ref|ZP_08382217.1| proline--tRNA ligase [Escherichia coli H299] gi|114152192|sp|Q8FKZ4|SYP_ECOL6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152193|sp|Q1RFZ4|SYP_ECOUT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|123148404|sp|Q0TLD7|SYP_ECOL5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152112309|sp|A1A7N8|SYP_ECOK1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226699141|sp|B7MBH6|SYP_ECO45 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701285|sp|B1LGZ7|SYP_ECOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782899|sp|B7UJ96|SYP_ECO27 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782901|sp|B7MP55|SYP_ECO81 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|110342007|gb|ABG68244.1| prolyl-tRNA synthetase [Escherichia coli 536] gi|115511603|gb|ABI99677.1| prolyl-tRNA synthetase [Escherichia coli APEC O1] gi|170518295|gb|ACB16473.1| prolyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|190908349|gb|EDV67939.1| prolyl-tRNA synthetase [Escherichia coli F11] gi|215263428|emb|CAS07748.1| prolyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|218363905|emb|CAR01570.1| prolyl-tRNA synthetase [Escherichia coli S88] gi|218425634|emb|CAR06420.1| prolyl-tRNA synthetase [Escherichia coli ED1a] gi|222032025|emb|CAP74764.1| Prolyl-tRNA synthetase [Escherichia coli LF82] gi|227838141|gb|EEJ48607.1| proline--tRNA ligase [Escherichia coli 83972] gi|294489624|gb|ADE88380.1| prolyl-tRNA synthetase [Escherichia coli IHE3034] gi|300301388|gb|EFJ57773.1| prolyl-tRNA synthetase [Escherichia coli MS 185-1] gi|300305742|gb|EFJ60262.1| prolyl-tRNA synthetase [Escherichia coli MS 200-1] gi|300409810|gb|EFJ93348.1| prolyl-tRNA synthetase [Escherichia coli MS 45-1] gi|307552047|gb|ADN44822.1| prolyl-tRNA synthetase [Escherichia coli ABU 83972] gi|307629771|gb|ADN74075.1| prolyl-tRNA synthetase [Escherichia coli UM146] gi|312944803|gb|ADR25630.1| prolyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C] gi|315285273|gb|EFU44718.1| prolyl-tRNA synthetase [Escherichia coli MS 110-3] gi|315295532|gb|EFU54858.1| prolyl-tRNA synthetase [Escherichia coli MS 153-1] gi|315300667|gb|EFU59894.1| prolyl-tRNA synthetase [Escherichia coli MS 16-3] gi|323950806|gb|EGB46683.1| prolyl-tRNA synthetase [Escherichia coli H252] gi|323955077|gb|EGB50853.1| prolyl-tRNA synthetase [Escherichia coli H263] gi|324008226|gb|EGB77445.1| prolyl-tRNA synthetase [Escherichia coli MS 57-2] gi|324014120|gb|EGB83339.1| prolyl-tRNA synthetase [Escherichia coli MS 60-1] gi|324112394|gb|EGC06371.1| prolyl-tRNA synthetase [Escherichia fergusonii B253] gi|325496126|gb|EGC93985.1| prolyl-tRNA synthetase [Escherichia fergusonii ECD227] gi|331052308|gb|EGI24347.1| proline--tRNA ligase [Escherichia coli TA206] gi|331081801|gb|EGI52962.1| proline--tRNA ligase [Escherichia coli H299] Length = 572 Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 112/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 564 Query: 437 Y 437 Y Sbjct: 565 Y 565 >gi|170768387|ref|ZP_02902840.1| prolyl-tRNA synthetase [Escherichia albertii TW07627] gi|170122491|gb|EDS91422.1| prolyl-tRNA synthetase [Escherichia albertii TW07627] Length = 572 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 65/182 (35%), Positives = 112/182 (61%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 ++ Sbjct: 564 DF 565 >gi|262044730|ref|ZP_06017778.1| proline-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037920|gb|EEW39143.1| proline-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 572 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 126/244 (51%), Positives = 173/244 (70%), Gaps = 4/244 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P D+E+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADSEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D D+ + N +F Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFS-DSSDY---AANIEFA 236 Query: 241 DIIS 244 + ++ Sbjct: 237 EAVA 240 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKAAVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+YA LS Sbjct: 444 YGIGVTRVVAAAIEQNFDDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELSAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|209521097|ref|ZP_03269827.1| prolyl-tRNA synthetase [Burkholderia sp. H160] gi|209498480|gb|EDZ98605.1| prolyl-tRNA synthetase [Burkholderia sp. H160] Length = 578 Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 135/257 (52%), Positives = 179/257 (69%), Gaps = 11/257 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIISHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G IE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGGIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQADFVMGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR REF+MKD+YSFD EG + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDSYSFDKDAEGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDFMDFPIPSENTD 238 Y+RIF RLGL+ + A++G IGG SHEF V+AD GE + +C + DF + N + Sbjct: 181 YVRIFTRLGLEFRAVAADNGSIGGSGSHEFHVIADIGEDAIAYCPTSDF------AANVE 234 Query: 239 FDDIISLNSIVEQWTAP 255 D + L + Q AP Sbjct: 235 AADALPL---IAQRAAP 248 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+AT GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVLDICRGIEVGHVFQLGTKYSEAMNATCLDETGKPRPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 +MG YGIG R++ A IE + D KGIIWP+S+APF++ L + +D+ R+ +K+YA Sbjct: 442 EMGCYGIGITRILGAAIEQNFDEKGIIWPESIAPFEVVLCPM-GYDRSDAVREQADKLYA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 501 ELVAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKDGKIEYQGR 551 >gi|237704354|ref|ZP_04534835.1| prolyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|26106541|gb|AAN78727.1|AE016755_227 Prolyl-tRNA synthetase [Escherichia coli CFT073] gi|91070839|gb|ABE05720.1| prolyl-tRNA synthetase [Escherichia coli UTI89] gi|226902266|gb|EEH88525.1| prolyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] Length = 590 Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 19 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 78 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 79 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 138 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 139 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 198 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 199 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 242 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 112/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 403 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 462 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 463 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 522 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 523 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 582 Query: 437 Y 437 Y Sbjct: 583 Y 583 >gi|291616370|ref|YP_003519112.1| ProS [Pantoea ananatis LMG 20103] gi|291151400|gb|ADD75984.1| ProS [Pantoea ananatis LMG 20103] Length = 572 Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 132/277 (47%), Positives = 181/277 (65%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTQKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR+ADR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRVADRHERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS--KDFM---------- 228 Y +IF+R+GL ++A++G IGG SHEF VLA +GE V S DF Sbjct: 181 YSQIFNRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSTASDFAANIEFAEAVA 240 Query: 229 ---DFPIPSE---NTDFDDIISLNSIVEQWTAPYAAT 259 D P P+E D + ++ +V Q+ P T Sbjct: 241 PAGDRPAPAEEMREVDTPNTKTIAELVSQFQQPIEKT 277 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 110/186 (59%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PMAQVADLRNVVEGDLSPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQIM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWP ++APF+++++ + ++ E++Y Sbjct: 440 TMGCYGIGITRVVAAAIEQNHDDRGIIWPAALAPFEVAILPMNMQKSFRVKELAEELYNT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD E+ G FA +L+G P +++G + + + ++E K R G ++ + Sbjct: 500 LRAKGVEVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDNQEIEYKARRAGEKQMIKQ 559 Query: 432 EEVINY 437 +E++ + Sbjct: 560 DEIVEF 565 >gi|149927159|ref|ZP_01915416.1| prolyl-tRNA synthetase [Limnobacter sp. MED105] gi|149824098|gb|EDM83319.1| prolyl-tRNA synthetase [Limnobacter sp. MED105] Length = 586 Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 143/338 (42%), Positives = 209/338 (61%), Gaps = 32/338 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++FL L+E P DAE+ SH+LM+R GMI + + GIY+++P+G +++ V I+REE Sbjct: 1 MRATQFFLNTLKEAPADAEVISHQLMMRAGMIKRLAGGIYTYMPVGLRSIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ESGR++ YG E+LR+ DR+D+ + GPTHEEV+TD+ R Sbjct: 61 MNRAGALELLMPAVQPAELWQESGRWEKYGPELLRMKDRHDRDYVIGPTHEEVITDVVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFGVMR REF+MKDAYSFD T E + +Y+ M+ + Sbjct: 121 EVKSYRQLPLNLYQIQTKFRDEIRPRFGVMRGREFVMKDAYSFDRTQEAALKTYDVMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y RIF RLGL + A++G IGG+ SHEF V+ADTGE + +C PS +D+ Sbjct: 181 YRRIFTRLGLNFRAVNADTGSIGGNRSHEFHVIADTGEDAIAYC---------PS--SDY 229 Query: 240 DDIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + L V P A+ + VH P N A ++G L Sbjct: 230 AANVELAEAVCTAQRPVASKTMDKVHT-------PGNSTCEAVAAQLG----------LA 272 Query: 298 MSATFKGADGKDHYVQMG-SYGIGAMRVVAAVIESSHD 334 ++AT K + Y++ + + +++V A++ H+ Sbjct: 273 LTATVKSVVFANEYLEKDETKPVKKVQIVLALVRGDHE 310 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P SD+ N D P+ K V A RGIEVGH+FY GTKYS + A F +GK + Sbjct: 388 PEPEVSDIRNVVEGDPSPDGKGVLAMCRGIEVGHVFYLGTKYSEALQAKFLEENGKPAVI 447 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYA 370 +MG YGIG R++ A IE + D +GIIWP S+APF++ L I K D+V A +K+Y Sbjct: 448 EMGCYGIGVTRILGAAIEQNFDDRGIIWPLSIAPFEVVLCPIGYKKSDEVKAQA-DKLYQ 506 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD E+ G FA +L+G PL+V +G + + + KVE + R Sbjct: 507 MLKDAGVDVMLDDRDERPGVMFADWELIGVPLRVTLGDRGLKEGKVEFQSR 557 >gi|242238324|ref|YP_002986505.1| prolyl-tRNA synthetase [Dickeya dadantii Ech703] gi|242130381|gb|ACS84683.1| prolyl-tRNA synthetase [Dickeya dadantii Ech703] Length = 572 Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 131/277 (47%), Positives = 178/277 (64%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFG+MR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGIMRAREFLMKDAYSFHTTQESLQITYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y +IF R+ L ++A++G IGG+ SHEF VLA +GE + S + + Sbjct: 181 YSKIFSRMDLDFRAVQADTGSIGGNASHEFQVLAASGEDDIVFSTGSDYAANIELAEAVA 240 Query: 233 PSEN----------TDFDDIISLNSIVEQWTAPYAAT 259 P+ N D + ++ +VEQ+ P T Sbjct: 241 PAHNRAAPSQDMLLVDTPNAKTITELVEQFKVPVEKT 277 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 115/188 (61%), Gaps = 3/188 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + AT + DG++ + MG Y Sbjct: 385 ADIRNVVEGDQSPDGRGSLLIKRGIEVGHIFQLGTKYSEALKATVQVEDGRNQVLTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RV+AA IE +HD +GIIWPD++APF+++++ + H ++ E IY +L G Sbjct: 445 GIGVTRVIAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVQEVAESIYQQLRAKG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E KHR G +E + + +++N Sbjct: 505 IEVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDNDDIEYKHRRKGEKEMIKVGDIVN 564 Query: 437 YASHRFSN 444 + + + ++ Sbjct: 565 FLTVQITH 572 >gi|327392821|dbj|BAK10243.1| Prolyl-tRNA synthetase ProS [Pantoea ananatis AJ13355] Length = 572 Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 132/277 (47%), Positives = 181/277 (65%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTQKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR+ADR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRVADRHERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS--KDFM---------- 228 Y +IF+R+GL ++A++G IGG SHEF VLA +GE V S DF Sbjct: 181 YSQIFNRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSTASDFAANIEFAEAVA 240 Query: 229 ---DFPIPSE---NTDFDDIISLNSIVEQWTAPYAAT 259 D P P+E D + ++ +V Q+ P T Sbjct: 241 PAGDRPAPAEEMREVDTPNTKTIAELVSQFQQPIEKT 277 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 110/186 (59%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PMAQVADLRNVVEGDLSPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQIM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWP ++APF+++++ + ++ E++Y Sbjct: 440 TMGCYGIGITRVVAAAIEQNHDDRGIIWPAALAPFEVAILPMNMQKSFRVKELAEELYNT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD E+ G FA +L+G P +++G + + + ++E K R G ++ + Sbjct: 500 LRAKGVEVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDNQEIEYKARRAGEKQMIKQ 559 Query: 432 EEVINY 437 +E++ + Sbjct: 560 DEIVEF 565 >gi|92114261|ref|YP_574189.1| prolyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] gi|114152183|sp|Q1QVL8|SYP_CHRSD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91797351|gb|ABE59490.1| prolyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] Length = 573 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 127/224 (56%), Positives = 165/224 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + L+E P DA+I SH+LMLR GMI + S G+Y+WLPLG + L V I+REE Sbjct: 1 MRASQLLISTLKETPADADIVSHQLMLRAGMIRRLSSGLYTWLPLGLRTLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P++Q A+LW ESGR+D YG +LR+ DR+++ YGPTHEEV+TD+ R+ Sbjct: 61 MNRAGAQEVLMPSIQPAELWQESGRWDQYGNLLLRIRDRHERDFCYGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFGVMR+REF+MKDAYSFD+ G + SY+ M+ + Sbjct: 121 EIRSYKQLPSNFYQIQTKFRDETRPRFGVMRAREFIMKDAYSFDIDQAGLQRSYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y+RIF RLGL + A++G IGG SHEF VLAD+GE V S Sbjct: 181 YMRIFTRLGLDFRAVEADNGDIGGSGSHEFQVLADSGEDAVIFS 224 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 71/166 (42%), Positives = 103/166 (62%), Gaps = 3/166 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K ARGIEVGH+F GTKYS M+AT +G+ + MG Sbjct: 385 VADLRNVVEGDPSPDGKGTLSIARGIEVGHVFQLGTKYSTAMNATVLDDNGQAVPLLMGC 444 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG RVVAA IE +HD GIIWPD++APF+I+L+ + AH + R+ + +Y +LS Sbjct: 445 YGIGVTRVVAAAIEQNHDAGGIIWPDAIAPFEIALVPMNAHKSERVREYADTLYQQLSDA 504 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD + G +FA +L+G P +V++G + + + ++E K R Sbjct: 505 GFDVLIDDRDLRPGVKFADQELIGIPHRVVIGDRGLDNDELEYKGR 550 >gi|218698853|ref|YP_002406482.1| prolyl-tRNA synthetase [Escherichia coli IAI39] gi|226701079|sp|B7NKX8|SYP_ECO7I RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218368839|emb|CAR16587.1| prolyl-tRNA synthetase [Escherichia coli IAI39] Length = 572 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 161/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 111/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLQIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 564 Query: 437 Y 437 Y Sbjct: 565 Y 565 >gi|238784905|ref|ZP_04628905.1| Prolyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] gi|238714222|gb|EEQ06234.1| Prolyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] Length = 572 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+ L + A++G IGG SHEF VLA++GE + S D Sbjct: 181 YSKIFERMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTD 226 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 74/186 (39%), Positives = 111/186 (59%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQVADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE ++D +GIIWPD++APF+++++ + H ++ E++Y Sbjct: 440 TMGCYGIGVSRVVAAAIEQNYDNRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYVT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + +VE KHR G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKHRRAGEKQMIKT 559 Query: 432 EEVINY 437 E+I++ Sbjct: 560 SEIIDF 565 >gi|114563918|ref|YP_751432.1| prolyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] gi|122299171|sp|Q07ZH1|SYP_SHEFN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114335211|gb|ABI72593.1| prolyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] Length = 571 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 122/218 (55%), Positives = 162/218 (74%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+Y+WLP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYTWLPSGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+TGAIE+ +P +Q ADLWVE+GR+D +G E+LR DRN++ + GPTHEEV+TD+ R Sbjct: 61 MNKTGAIEILMPLVQPADLWVETGRWDKFGPELLRFQDRNNRDFVLGPTHEEVITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T YQ+Q KFRDE+RPRFGVMR+REFLMKDAYSF L E ++Y+ M + Sbjct: 121 ELSSYKQLPLTLYQVQTKFRDEVRPRFGVMRAREFLMKDAYSFHLDQETMDNTYHAMHTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y I R+GL P+ A++G IGG +SHEF VLA++GE Sbjct: 181 YSNILTRMGLSFRPVLADTGSIGGSMSHEFHVLANSGE 218 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/189 (36%), Positives = 108/189 (57%), Gaps = 3/189 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PLATAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTSYSKSMNATVLDENGKAQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE ++D +GI WP+++APF + ++ + H D EK+Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNNDDRGITWPEAIAPFTVGILPMNMHKSHRVADIAEKLYQD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G +V DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LADAGVEVLMDDRKERPGVMFADMELIGLPHVVVIGDRNIDAGVFEYKNRRTGEKQDIPF 558 Query: 432 EEVINYASH 440 +E++ + ++ Sbjct: 559 DEIVAFLTN 567 >gi|270264794|ref|ZP_06193058.1| prolyl-tRNA synthetase [Serratia odorifera 4Rx13] gi|270041092|gb|EFA14192.1| prolyl-tRNA synthetase [Serratia odorifera 4Rx13] Length = 572 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 161/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N AIE+ +P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNANAIEVCMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQATYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL P+ A++G IGG SHEF VLAD+GE + S Sbjct: 181 YSKIFSRMGLDFRPVHADTGSIGGSASHEFQVLADSGEDDIVFS 224 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 73/186 (39%), Positives = 112/186 (60%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K + RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQVADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA-CEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H A E++Y Sbjct: 440 TMGCYGIGVTRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYNT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + ++E K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHSIVIGDRNLDSEEIEYKNRRVGEKQMIKT 559 Query: 432 EEVINY 437 E++++ Sbjct: 560 GEIVDF 565 >gi|262371768|ref|ZP_06065047.1| prolyl-tRNA synthetase [Acinetobacter junii SH205] gi|262311793|gb|EEY92878.1| prolyl-tRNA synthetase [Acinetobacter junii SH205] Length = 571 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 124/226 (54%), Positives = 164/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+YSWLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYSWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGALEVFMPVTQPAALWEESGRFEQYGPELLRFKDRHTNDFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF E + +Y+ M+ + Sbjct: 121 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHANQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLASSGEDDIAFSTE 226 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/185 (41%), Positives = 104/185 (56%), Gaps = 3/185 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y+ D+ N D P+ K RGIEVGHIF GTKYS + G DGK Sbjct: 382 AKYSEVYDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEALGCKVLGEDGKPFT 441 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYA 370 V MG YGIG RVVAA IE + D KGIIWP ++APF+++++ + AH +A E +YA Sbjct: 442 VTMGCYGIGVTRVVAAAIEQNFDDKGIIWPQAIAPFEVAIVPMNAHKSPRTLEAAEALYA 501 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G DV DD E+ G +F+ +L+G P ++++G K + E K R ++S Sbjct: 502 ELQAQGYDVLLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDEESTNLS 561 Query: 431 LEEVI 435 EE+I Sbjct: 562 KEELI 566 >gi|238751425|ref|ZP_04612917.1| Prolyl-tRNA synthetase [Yersinia rohdei ATCC 43380] gi|238710292|gb|EEQ02518.1| Prolyl-tRNA synthetase [Yersinia rohdei ATCC 43380] Length = 572 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 132/277 (47%), Positives = 177/277 (63%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD--------FMDFPI 232 Y +IF R+ L + A++G IGG SHEF VLA++GE + S D F + Sbjct: 181 YSKIFERMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTDSDYAANIEFAEALA 240 Query: 233 PSEN----------TDFDDIISLNSIVEQWTAPYAAT 259 P+E D + ++ +VEQ+ P T Sbjct: 241 PTEPRAVAGEELRIIDTPNAKTIAELVEQFNLPIEKT 277 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 74/186 (39%), Positives = 112/186 (60%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQIADIRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE ++D +GIIWPD++APF+++++ + H ++ E++YA Sbjct: 440 TMGCYGIGVSRVVAAAIEQNYDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + +VE K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRAGEKQMIKT 559 Query: 432 EEVINY 437 E+I++ Sbjct: 560 SEIIDF 565 >gi|270157462|ref|ZP_06186119.1| prolyl-tRNA synthetase [Legionella longbeachae D-4968] gi|289164147|ref|YP_003454285.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA synthesis factor) [Legionella longbeachae NSW150] gi|269989487|gb|EEZ95741.1| prolyl-tRNA synthetase [Legionella longbeachae D-4968] gi|288857320|emb|CBJ11147.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA synthesis factor) [Legionella longbeachae NSW150] Length = 569 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 122/224 (54%), Positives = 165/224 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL L+E P DAEI SH+LM+RTGMI + G+Y+W+PLG K L + I+REE Sbjct: 1 MRASQWFLATLKETPNDAEIVSHQLMVRTGMIRKLGSGLYTWMPLGLKVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N ++E+ +P +Q A+LW E+GR+D++G ++L + D ND+ +GPTHEEV+TDI R Sbjct: 61 MNNINSMEVLMPAVQPAELWQETGRWDTFGGQLLTMKDSNDREYCFGPTHEEVITDIMRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP +FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L E + +Y M+ + Sbjct: 121 ELQSYKQLPASFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLNLESLQDTYKDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF RLGLK + A++G IGG SHEF VLAD+GE +F S Sbjct: 181 YCRIFDRLGLKYRAVEADTGAIGGSASHEFQVLADSGEDLIFYS 224 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/179 (37%), Positives = 101/179 (56%), Gaps = 3/179 (1%) Query: 261 DVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N K D P+ K S RGIEVGH+F G KY+ M+A G+ + MG YG Sbjct: 382 DLRNVKDGDISPDGKGTLYSCRGIEVGHVFQLGDKYAKAMNAVVINEQGQLETMLMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGC 377 +G RVVAA IE HD KGIIWP ++APF++ +I + AH + +++Y + + Sbjct: 442 LGITRVVAAAIEQHHDEKGIIWPQNIAPFQLVIIPLNAHRSPEVKKQADRLYEQFKNLSI 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD E+ G FA DL+G P +++V + + + VE K R TG + +L+ ++ Sbjct: 502 DVLIDDRNERAGVLFADHDLIGIPHRLVVSDRNIEQNCVEYKSRATGEMQQFNLDTAVD 560 >gi|123443459|ref|YP_001007432.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160618|ref|YP_004297195.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|152112962|sp|A1JP53|SYP_YERE8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|122090420|emb|CAL13288.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318606904|emb|CBY28402.1| prolyl-tRNA synthetase; Bacterial type [Yersinia enterocolitica subsp. palearctica Y11] gi|325664848|gb|ADZ41492.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860908|emb|CBX71188.1| prolyl-tRNA synthetase [Yersinia enterocolitica W22703] Length = 572 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+ L + A++G IGG SHEF VLAD+GE + S + Sbjct: 181 YSKIFERMDLNFRAVLADTGSIGGSASHEFQVLADSGEDDIVFSTE 226 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 76/186 (40%), Positives = 111/186 (59%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQVADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA-CEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H A E++YA Sbjct: 440 TMGCYGIGVSRVVAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + +VE K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRAGEKQMIKT 559 Query: 432 EEVINY 437 E+I++ Sbjct: 560 SEIIDF 565 >gi|300938604|ref|ZP_07153336.1| prolyl-tRNA synthetase [Escherichia coli MS 21-1] gi|331645338|ref|ZP_08346449.1| proline--tRNA ligase [Escherichia coli M605] gi|281177420|dbj|BAI53750.1| prolyl-tRNA synthetase [Escherichia coli SE15] gi|300456450|gb|EFK19943.1| prolyl-tRNA synthetase [Escherichia coli MS 21-1] gi|330910045|gb|EGH38555.1| prolyl-tRNA synthetase [Escherichia coli AA86] gi|331046095|gb|EGI18214.1| proline--tRNA ligase [Escherichia coli M605] Length = 572 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 161/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFS 224 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 112/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 564 Query: 437 Y 437 Y Sbjct: 565 Y 565 >gi|187925415|ref|YP_001897057.1| prolyl-tRNA synthetase [Burkholderia phytofirmans PsJN] gi|226699128|sp|B2SYU8|SYP_BURPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|187716609|gb|ACD17833.1| prolyl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 578 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 129/229 (56%), Positives = 169/229 (73%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G IE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGGIELLMPAVQPAELWQESGRWEKYGPELLRFKDRRQSDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD +G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDMDGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF RLGL + A++G IGG SHEF V+A+TGE + +C + DF Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPTSDF 229 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 100/170 (58%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M AT GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVLDICRGIEVGHVFQLGTKYSEAMGATCLDETGKPRPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D KGIIWP+S+APF++ L + + R +K+YA Sbjct: 442 EMGCYGIGVTRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSEAVRAEADKLYAA 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L + G DV DD GE+ G FA +L+G P ++++G + + + K+E + R Sbjct: 502 LVEAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKEGKLEYQGR 551 >gi|227122|prf||1614347A Pro-tRNA synthetase Length = 572 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 122/224 (54%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+L++R GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLIVRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGQASHEFQVLAQSGEDDVVFS 224 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/182 (35%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P + + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 TGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|293394735|ref|ZP_06639027.1| proline-tRNA ligase [Serratia odorifera DSM 4582] gi|291422861|gb|EFE96098.1| proline-tRNA ligase [Serratia odorifera DSM 4582] Length = 572 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N AIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNANAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKD+YSF T E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDSYSFHTTQESLQATYDAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL P++A++G IGG SHEF VLA +GE + S Sbjct: 181 YSKIFSRMGLDFRPVQADTGSIGGSASHEFQVLAASGEDDIVFS 224 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 74/190 (38%), Positives = 113/190 (59%), Gaps = 3/190 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 Q P +D+ N D+ P+ + + RGIEVGHIF GTKYS M AT +G DG+ Sbjct: 376 QRDLPLPQVADIRNVVEGDASPDGQGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGR 435 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEK 367 + + MG YGIG RVVAA IE +HD +GIIWPD++APF ++++ + H ++ EK Sbjct: 436 NQLLNMGCYGIGVTRVVAAAIEQNHDDRGIIWPDAIAPFHVAILPMNMHKSFRVQELAEK 495 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD E+ G FA +L+G P +++G + + ++E K+R G ++ Sbjct: 496 LYAELRSHGIDVILDDRKERPGVMFADMELIGVPHSIVIGDRNLDSDEIEYKNRRVGEKQ 555 Query: 428 DMSLEEVINY 437 + +++ Y Sbjct: 556 MIKTGDIVEY 565 >gi|328861737|gb|EGG10840.1| hypothetical protein MELLADRAFT_42095 [Melampsora larici-populina 98AG31] Length = 486 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 154/439 (35%), Positives = 249/439 (56%), Gaps = 41/439 (9%) Query: 1 MRRSKYFLPILQENPRDAEIAS--HKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 ++ ++Y I + D I+S H L+LR G + Q S GI+++LP + L V I+R Sbjct: 31 LQSNRYSPTIKTQAQSDTSISSPGHHLLLRAGFLRQSSTGIWNFLPNAIRVLKKVEDIVR 90 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 EE R GA E+S+ LQ++ LW SGR+++ GKE+ RL+DR D ++ PTHEE +T + Sbjct: 91 EEMERIGASEVSLSHLQTSSLWKASGRWNTAGKELFRLSDRKDAHLLLAPTHEEEITQLV 150 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + + S + LP + I K+RDELRPR G++RSREF+MKD Y+FDL + +Y+ + Sbjct: 151 KLDVNSSKQLPVRLFHIGRKYRDELRPRAGLLRSREFIMKDLYTFDLDRTKALETYSAVQ 210 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENT 237 +Y +I R+G+ + A+SG IGG SHE+ + +GE T + C+K Sbjct: 211 GAYEKILKRIGIPFVVAEADSGAIGGSQSHEYQFESPSGEDTVIKCTK------------ 258 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D I+ + + P SDV+ + L S++ IEV H FY GTKYS Sbjct: 259 --CDYIANVELAKSVLVP--PLSDVNALRCRSPLG-----SSKAIEVAHTFYLGTKYSSS 309 Query: 298 MSATFKGAD-----GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 +SAT+K +D K++ ++MG +GIG R++ A+ E SH G+ WP +VAPFK+ +I Sbjct: 310 LSATYKISDPKTGLQKENPLEMGCFGIGISRLMGAIAECSHTETGLRWPINVAPFKVCII 369 Query: 353 N------------IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 IK+ Q+ E I ++ ++ +V DD ++IG + ADL+G+ Sbjct: 370 IPMQENDAGSSDLIKSVAQIIGREVESIKTKVGELKGEVLIDDRIQRIGWKLMDADLVGY 429 Query: 401 PLQVIVGSKFVSDSKVEIK 419 P+ +++G++++ + +EI+ Sbjct: 430 PILIVLGNRWIKNQVIEIR 448 >gi|48783|emb|CAA39134.1| ProRS [Escherichia coli] gi|147362|gb|AAA24420.1| prolyl-tRNA synthetase [Escherichia coli] Length = 572 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 122/224 (54%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+L++R GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLIVRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGQASHEFQVLAQSGEDDVVFS 224 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P + + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NY 437 Y Sbjct: 564 EY 565 >gi|322831614|ref|YP_004211641.1| prolyl-tRNA synthetase [Rahnella sp. Y9602] gi|321166815|gb|ADW72514.1| prolyl-tRNA synthetase [Rahnella sp. Y9602] Length = 572 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 125/230 (54%), Positives = 164/230 (71%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N AIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNANAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y +IF+R+GL + A++G IGG SHEF VLA +GE V S D DF Sbjct: 181 YSQIFNRMGLDFRAVLADTGSIGGSASHEFQVLAQSGEDDVVFS-DSSDF 229 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 77/187 (41%), Positives = 114/187 (60%), Gaps = 3/187 (1%) Query: 254 APYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A +D+ N D P+ + V RGIEVGHIF GTKYS M+AT +G DG++ Sbjct: 379 AALPEVADIRNVVAGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEAMNATVQGEDGRNQL 438 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYA 370 + MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H +DA E +Y Sbjct: 439 MTMGCYGIGVTRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKDAAEALYK 498 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G DV DD E+ G FA +L+G P QV++G + + ++E K+R TG ++ + Sbjct: 499 ELRSHGIDVILDDRKERPGVMFADMELIGVPHQVVIGDRNLDAEELEYKNRRTGEKQMIK 558 Query: 431 LEEVINY 437 +++ Y Sbjct: 559 QSDIVEY 565 >gi|238787209|ref|ZP_04631008.1| Prolyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] gi|238724471|gb|EEQ16112.1| Prolyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] Length = 572 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 132/277 (47%), Positives = 177/277 (63%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y +IF R+ L + A++G IGG SHEF VLA++GE + S +F + Sbjct: 181 YSKIFERMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAANIEFAEAMA 240 Query: 233 PSEN----------TDFDDIISLNSIVEQWTAPYAAT 259 PSE D + ++ +VEQ+ P T Sbjct: 241 PSEPRAAAAEELRIIDTPNAKTIADLVEQFQMPIEKT 277 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 74/186 (39%), Positives = 111/186 (59%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF G+KYS M AT +G DG++ + Sbjct: 380 PLPQVADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGSKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++YA Sbjct: 440 TMGCYGIGVSRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + +VE K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRAGEKQMIKT 559 Query: 432 EEVINY 437 E+I + Sbjct: 560 NEIIEF 565 >gi|238763953|ref|ZP_04624909.1| Prolyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] gi|238697770|gb|EEP90531.1| Prolyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] Length = 572 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+ L + A++G IGG SHEF VLAD+GE + S Sbjct: 181 YSKIFSRMDLNFRAVLADTGSIGGSASHEFQVLADSGEDDIVFS 224 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 69/159 (43%), Positives = 101/159 (63%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M AT +G DG++ + MG YGIG RVVAA IE +HD +GII Sbjct: 407 RGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVMTMGCYGIGVSRVVAAAIEQNHDDRGII 466 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H ++ E++Y L G DV DD E+ G FA +L+ Sbjct: 467 WPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRAHGIDVILDDRKERPGVMFADMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P V++G + + +VE K+R G + + E+I++ Sbjct: 527 GVPHNVVIGDRNLDSEEVEYKNRRAGEKHMIKTSEIIDF 565 >gi|94986834|ref|YP_594767.1| prolyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] gi|114152206|sp|Q1MRD0|SYP_LAWIP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|94731083|emb|CAJ54446.1| Prolyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] Length = 575 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 128/226 (56%), Positives = 165/226 (73%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P L+E P DAE+ SHKL++R GMI + + GIY+WLPLG K L+ +IIR E Sbjct: 1 MRWSQCYIPTLKEAPGDAELLSHKLLIRAGMIRKLTSGIYTWLPLGLKTLNKAISIIRSE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q ADLW ESGR+D YGKE+LR+ DR+D+ GPTHEEV+T + R Sbjct: 61 MNRIGAEEILMPMVQPADLWKESGRWDQYGKELLRIKDRHDREYCLGPTHEEVVTHLLRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR+REFLMKDAYSFD EG+ SY+ MF + Sbjct: 121 EVRSYRQLPINVYQIQTKFRDEIRPRFGLMRAREFLMKDAYSFDQDNEGADISYHTMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 Y IF + L + A+SG IGG+ SHEF+V+AD+GE T FC K Sbjct: 181 YKAIFTCMALDFRAVEADSGSIGGNFSHEFMVIADSGEDTIAFCRK 226 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 75/166 (45%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P R A +GIEVGH+F GTKYS M+A F +G++ + MG YGIG RV+A Sbjct: 390 DGCPSCGREIALTKGIEVGHVFKLGTKYSKSMNAFFLDENGEEQLMVMGCYGIGVSRVIA 449 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A IE ++D GII+P +APF+I LIN+ D+ +IY G +VF DD E Sbjct: 450 ACIEQNNDKYGIIFPPPLAPFEIMLINLDPRDESVVMKASEIYQFFLSEGIEVFLDDREE 509 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G +F ADLLGFP+QVI+G+K +++ +E+K+R TG + SLE Sbjct: 510 RPGIKFNDADLLGFPIQVIIGAKSLANGIIEVKNRKTGEKSSFSLE 555 >gi|284008500|emb|CBA75007.1| prolyl-tRNA synthetase [Arsenophonus nasoniae] Length = 571 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SHKLMLR GMI + + G+Y WLP G + L V IIREE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHKLMLRAGMIRKLASGLYDWLPTGVRVLRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNRAGAIEISMPIVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 EVTSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTDQDSLQQTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R+G ++A++G IGG+ SHEF VLAD+GE + S Sbjct: 181 YSAIFTRIGFNFRAVQADTGSIGGNASHEFQVLADSGEDNIVFS 224 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 66/159 (41%), Positives = 101/159 (63%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M A+ + DG + V MG YGIG R+VAA IE SHD KGII Sbjct: 407 RGIEVGHIFQLGTKYSEAMKASVQNEDGHNQTVTMGCYGIGVTRIVAAAIEQSHDDKGII 466 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H ++ E++Y L G DV DD E+ G FA +L+ Sbjct: 467 WPDAIAPFQVAILPMNMHKSYRVKEVAERLYRDLQAKGIDVLLDDRKERPGVMFADMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P +++G + + +++VE K R +E +++ ++++ Sbjct: 527 GIPHTIVIGDRNLDNNQVEYKQRRNNEKEYINIAGIVDF 565 >gi|332704074|ref|ZP_08424162.1| Prolyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] gi|332554223|gb|EGJ51267.1| Prolyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] Length = 576 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 165/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+++LP L+E P DAE+ SHKL+LR G+I Q + GIY++LP+G +AL+ V I+R+E Sbjct: 1 MRLSRFYLPTLKEVPADAEVVSHKLLLRAGLIRQLTSGIYTYLPMGLRALNKVADIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q A+LW E+GR++ YGKE+LR DR D GPTHEEV+T++ R Sbjct: 61 MDRAGAQEILMPMVQPAELWKETGRWEFYGKELLRFKDRKDSDYCLGPTHEEVVTNLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD EG+ SY M+ + Sbjct: 121 EVRSYRQLPLNLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDRDEEGANKSYWSMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF RLGLK + A+SG IGG SHEF+VLA TGE + ++ Sbjct: 181 YAQIFRRLGLKFKAVEADSGAIGGSFSHEFMVLAATGEDTIATCQE 226 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/155 (45%), Positives = 101/155 (65%), Gaps = 2/155 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F G KYS M ATF +GKD + MG YGIG R++A+ IE +HD GII Sbjct: 402 RGIEVGHVFKLGYKYSKAMHATFLDENGKDQTMVMGCYGIGVSRIIASAIEQNHDDGGII 461 Query: 340 WPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +P S+AP++ +LI++ K+ D V A E +Y L G +V +DD E+ G +F ADL+ Sbjct: 462 FPPSIAPYEAALISLGKSGDAVNAKAAE-LYESLRAEGIEVLFDDREERPGVKFKDADLV 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G+P+Q+++G K + VE K R TG + ++ LE+ Sbjct: 521 GYPMQIVLGGKGLERGVVEAKDRRTGEKAELPLED 555 >gi|238796636|ref|ZP_04640143.1| Prolyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] gi|238719614|gb|EEQ11423.1| Prolyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] Length = 572 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 131/277 (47%), Positives = 177/277 (63%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y +IF R+ L + A++G IGG SHEF VLA++GE + S +F + Sbjct: 181 YSKIFERMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAANIEFAEALA 240 Query: 233 PSEN----------TDFDDIISLNSIVEQWTAPYAAT 259 P+E D + ++ +VEQ+ P T Sbjct: 241 PTEPRGTATEELRIVDTPNAKTIAELVEQFKLPIEKT 277 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 74/186 (39%), Positives = 111/186 (59%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQVADLRNVVEGDISPDGQGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE ++D +GIIWPD++APF+++++ + H ++ E++YA Sbjct: 440 TMGCYGIGVSRVVAAAIEQNYDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + +VE KHR G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKHRRAGEKQMIKT 559 Query: 432 EEVINY 437 E+I + Sbjct: 560 SEIIEF 565 >gi|291613215|ref|YP_003523372.1| prolyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] gi|291583327|gb|ADE10985.1| prolyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] Length = 566 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 129/264 (48%), Positives = 179/264 (67%), Gaps = 12/264 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P +AE+ SH+LMLR G I + S G+Y+W+PLG + L V A++REE Sbjct: 1 MRVSQFFISTLKEAPSEAELPSHRLMLRAGYIRKLSSGLYTWMPLGLRVLRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++G IE+ +P +Q A+LW E+GR+D +G +ML++ DR+D +GPTHEEV+TDI R Sbjct: 61 MNKSGGIELLMPAVQPAELWQETGRWDVFGPQMLKIKDRHDNLFCFGPTHEEVITDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + E + +Y M+ + Sbjct: 121 EVKSYRQLPLNFYQIQTKFRDEVRPRFGVMRAREFVMKDAYSFHSSFESLEQTYRVMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y RIF RLGL+ + A++G IGG SHEF VLAD+GE + FC N+D+ Sbjct: 181 YTRIFTRLGLQFRAVAADTGAIGGSGSHEFHVLADSGEDALAFCP-----------NSDY 229 Query: 240 DDIISLNSIVEQWTAPYAATSDVH 263 + L V TA A+ ++ Sbjct: 230 AANVELAEAVAPATARAPASQELQ 253 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 5/186 (2%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D+ P+ K RGIEVGHIF TKYS + AT+ +GK ++MG YG Sbjct: 382 DLRNVVAGDASPDGKGALELCRGIEVGHIFQLRTKYSEALQATYLDENGKAQVMEMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVG 376 IG R+VAA IE + D +GI P +APF++++ I IK + V R+A E++YA L+ G Sbjct: 442 IGVSRIVAAAIEQNFDERGIALPSGMAPFQVAIAPIGIKKSEAV-RNAAEQLYAELTAAG 500 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P ++++G + + + KVE + R + + L++ + Sbjct: 501 VEVLLDDRDERPGVMFADLELIGVPHRIVIGDRGLKEGKVEYQGRKDETAQSIPLQDAVK 560 Query: 437 YASHRF 442 + Sbjct: 561 LVQSKL 566 >gi|119774298|ref|YP_927038.1| prolyl-tRNA synthetase [Shewanella amazonensis SB2B] gi|152016599|sp|A1S4R2|SYP_SHEAM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119766798|gb|ABL99368.1| prolyl-tRNA synthetase [Shewanella amazonensis SB2B] Length = 572 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 126/243 (51%), Positives = 168/243 (69%), Gaps = 8/243 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVVSHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q DLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPGDLWVETGRWDQFGPELLRFTDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF LT E +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLTQETLDETYQAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y IF R+GL P+ A++G IGG +SHEF VLA +GE + S + + P+ Sbjct: 181 YSNIFSRMGLAFRPVLADTGSIGGSVSHEFHVLAQSGEDLIAYSTGSDYAANIEKAEAPL 240 Query: 233 PSE 235 P+E Sbjct: 241 PTE 243 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 110/193 (56%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N ++ P+ K A RGIEVGHIF G KYS M+AT +GK + Sbjct: 379 PLVQGADIRNVVEGEATPDGKGTYAFARGIEVGHIFQLGNKYSEAMNATVLDENGKSQIM 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE ++D +GI+WP+++APF + ++ + H D E +Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNNDERGIVWPEAIAPFTVGILPMNMHKSHRVTDTAEALYKE 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L++ G +V +DD E+ G FA +LLG P V++G + + E K+R TG + ++ Sbjct: 499 LTEAGFEVLFDDRKERPGVMFADMELLGIPHTVVIGDRNIDTGVYEYKNRRTGEKTEVPF 558 Query: 432 EEVINYASHRFSN 444 E++++ +F Sbjct: 559 AELVSFLKAQFQQ 571 >gi|167721308|ref|ZP_02404544.1| prolyl-tRNA synthetase [Burkholderia pseudomallei DM98] Length = 568 Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 127/219 (57%), Positives = 165/219 (75%), Gaps = 2/219 (0%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 ++E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE NR GAIE+ Sbjct: 1 MKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELL 60 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 +P +Q A+LW ESGR++ YG E+LR+ DR + GPTHEEV+TDI R+ IKSYR +P Sbjct: 61 MPAVQPAELWQESGRWEQYGPELLRIKDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPV 120 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ +Y+RIF R+GL Sbjct: 121 NFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTRIGL 180 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 + P+ A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 EFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 219 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 372 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 431 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGI+WP+++APF++ L + +D+ R+A +K+YA Sbjct: 432 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPM-GYDRSDAVREAADKLYA 490 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 491 NLAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 541 >gi|332289599|ref|YP_004420451.1| prolyl-tRNA synthetase [Gallibacterium anatis UMN179] gi|330432495|gb|AEC17554.1| prolyl-tRNA synthetase [Gallibacterium anatis UMN179] Length = 568 Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPTDAEVVSHQLMLRAGMIRKLAAGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q ADLW ES R++ YG E+LR DR D+ + GPTHEEV+TD+ R Sbjct: 61 MNKSGAIEVVMPVVQPADLWQESQRWEQYGPELLRFTDRGDRPFVLGPTHEEVITDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKD YSF L E + +Y+ M + Sbjct: 121 ELSSYKQLPINLYQIQTKFRDEVRPRFGVMRSREFIMKDGYSFHLDKESLQQTYDVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+RLGL P++A++G IGG SHEF VLAD+GE + S + Sbjct: 181 YCNIFNRLGLDFRPVQADNGSIGGSGSHEFQVLADSGEDDIVFSTE 226 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 72/191 (37%), Positives = 110/191 (57%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P K + RGIEVGHIF G KYS M AT +G DGK + Sbjct: 377 PTPQIADIRNVVEGDPSPCGKGTLLIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPQTM 436 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC-RDACEKIYAR 371 MG YGIG RVVAA IE SHD +GIIW D++APF+++++ + H + E++Y Sbjct: 437 MMGCYGIGITRVVAAAIEQSHDERGIIWSDALAPFQVAIVPMNMHKSAAVQQYAEELYQT 496 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V +DD E+ G FA +L+G P +I+G K + ++E K R +G ++ + Sbjct: 497 LLAQGIEVLFDDRKERPGVMFADMELIGIPHMIIIGEKNLEKGEIEYKSRRSGEKQMVDK 556 Query: 432 EEVINYASHRF 442 ++++ + + + Sbjct: 557 QQLVKFITEKL 567 >gi|197286110|ref|YP_002151982.1| prolyl-tRNA synthetase [Proteus mirabilis HI4320] gi|227357229|ref|ZP_03841586.1| prolyl-tRNA synthetase [Proteus mirabilis ATCC 29906] gi|226701319|sp|B4F249|SYP_PROMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|194683597|emb|CAR44486.1| prolyl-tRNA synthetase [Proteus mirabilis HI4320] gi|227162492|gb|EEI47481.1| prolyl-tRNA synthetase [Proteus mirabilis ATCC 29906] Length = 571 Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 137/303 (45%), Positives = 189/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAEI SH+LMLR GMI + + G+Y W+P G + L + I+REE Sbjct: 1 MRTSHYLLSTLKETPADAEIVSHQLMLRAGMIRKLASGLYDWMPTGVRVLRKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G++E+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TDI R+ Sbjct: 61 MDNAGSLEISMPVVQPADLWQESGRWEQYGPELLRFTDRGERPFVLGPTHEEVVTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF ++ E + +Y++M+ + Sbjct: 121 EITSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHISQESLQETYDRMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL P+ A++G IGG SHEF VLAD+GE + S +D+ Sbjct: 181 YSNIFTRIGLDFRPVLADTGSIGGSASHEFQVLADSGEDDIVFST----------ASDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L V T AT ++ +L D+ N + A +E +++LP+ Sbjct: 231 ANIELAEAVMPATPRSPATEEL---RLVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 113/191 (59%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K + RGIEVGHIF G KYS + AT + +G + V Sbjct: 380 PLAEMADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGKKYSEALKATVQNEEGHNQVV 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIWPD++APF+++++ + H ++ EK+YA Sbjct: 440 TMGCYGIGITRIVAAAIEQNHDARGIIWPDAIAPFQVAILPMNMHRSYRVKEVAEKLYAD 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV +DD E+ G FA +L+G P +++G + + + +VE K R + + +++ Sbjct: 500 LRAQGIDVLFDDRKERPGVMFADMELIGVPHTIVIGDRNLDNEQVEYKARRSDDKSLVNV 559 Query: 432 EEVINYASHRF 442 +V+ + + Sbjct: 560 NDVVAFIKEQL 570 >gi|218513336|ref|ZP_03510176.1| prolyl-tRNA synthetase [Rhizobium etli 8C-3] Length = 215 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 121/211 (57%), Positives = 161/211 (76%) Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 DF+DF IP E+TDFD + L +I ++WT+ YAATS++H+E F+++PE +R+SARGIE G Sbjct: 1 DFVDFDIPGESTDFDSVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGERLSARGIEAG 60 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 HIFYFGTKYS PM A +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVA Sbjct: 61 HIFYFGTKYSEPMGAKVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVA 120 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 PF + +IN+KA DQ C D CE IYA L+K G DV +DD ++ G++FA ADL+G P+Q+I Sbjct: 121 PFDVVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQII 180 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G + V++ +VE+K R TG RE M++E IN Sbjct: 181 AGPRAVANGEVEVKDRKTGARETMTIEAAIN 211 >gi|189424968|ref|YP_001952145.1| prolyl-tRNA synthetase [Geobacter lovleyi SZ] gi|226701293|sp|B3E1X5|SYP_GEOLS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189421227|gb|ACD95625.1| prolyl-tRNA synthetase [Geobacter lovleyi SZ] Length = 576 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 119/221 (53%), Positives = 162/221 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++F+P L+E P DAE+ SH+LM+R+GMI + + GIY+++PLG +++ I+REE Sbjct: 1 MRYTQFFIPTLKETPSDAEVVSHQLMMRSGMIRKIAAGIYTYMPLGLRSIRKFEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW+ES R+ YGKE+LR DR D GPTHEE++TDI R Sbjct: 61 MNRAGAIELLMPGVQPAELWIESKRWAQYGKELLRFKDRKDNEFCMGPTHEEIITDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR +P FYQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ + SY+KM+ + Sbjct: 121 EVKSYRQMPVNFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDVDSSAADLSYDKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R GL + A++G IGG SHEF+VLA +GE + Sbjct: 181 YNRIFERCGLNFRAVEADTGSIGGSASHEFMVLASSGEDAI 221 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 94/278 (33%), Positives = 136/278 (48%), Gaps = 43/278 (15%) Query: 182 LRIFHRLGLKSIPMRAES-------------GPIGGDLSHEFIVLADTGETQVFCSKDFM 228 L++ +RLG I M + GP+G L E V+AD + + Sbjct: 303 LKLKNRLGWDEIQMATDDEILRFTGSPPGFLGPLG--LKAELQVVAD------YAVETMA 354 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAA----TSDVHNEKLFDSLPENKRVSA----- 279 DF I + TD + +T S + + +L + R S Sbjct: 355 DFVIGANETD-----------QHYTGANTGRDFQISQIADIRLIGAGDPCPRCSGGTLEV 403 Query: 280 -RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIEVGH+F GTKYS M+AT+ DGK+ + MG YGIG R VAA IE +HD G+ Sbjct: 404 WRGIEVGHVFKLGTKYSSSMNATYLDKDGKEQIIFMGCYGIGIGRTVAASIEQNHDENGV 463 Query: 339 IWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWP +APF S++ I A D+ A + I+ RL G +V DD E+ G +F DL Sbjct: 464 IWPLPLAPFHCSVVAINAQKDEAVMAAAQDIHDRLEAAGVEVLLDDRDERPGVKFKDHDL 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G PL+++VG K +++ VE K R G + ++ E+ I Sbjct: 524 IGIPLRIVVGGKNLAEGNVEFKQRAGGEMQLLAPEQAI 561 >gi|308185763|ref|YP_003929894.1| Prolyl-tRNA synthetase [Pantoea vagans C9-1] gi|308056273|gb|ADO08445.1| Prolyl-tRNA synthetase [Pantoea vagans C9-1] Length = 572 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 164/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTQKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q ADLW ESGR++ YG E+LR+ADR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAVEILMPVVQPADLWQESGRWEEYGPELLRIADRHERPFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF ++ E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHVSQESLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D Sbjct: 181 YSQIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSTD 226 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 114/186 (61%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A+ +D+ N D P+ K RGIEVGHIF GTKYS + A+ +G DG++ + Sbjct: 380 PLASVADIRNVVEGDLSPDGKGTLQIKRGIEVGHIFQLGTKYSDALKASVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + ++ E++YA Sbjct: 440 SMGCYGIGITRVVAAAIEQNHDDRGIIWPDALAPFEVAILPMNMQKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD E+ G FA +L+G P +++G + + + ++E K R G ++ + Sbjct: 500 LRAKGVEVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDNQEIEYKSRRAGEKQMIKQ 559 Query: 432 EEVINY 437 +E++++ Sbjct: 560 DEIVDF 565 >gi|254785039|ref|YP_003072467.1| proline--tRNA ligase [Teredinibacter turnerae T7901] gi|259511626|sp|C5BPN9|SYP_TERTT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|237684457|gb|ACR11721.1| proline--tRNA ligase [Teredinibacter turnerae T7901] Length = 574 Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 121/226 (53%), Positives = 166/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + +E P DAE+ SHKLMLR G+I + + G+Y+WLPLG + L V I+R+E Sbjct: 1 MRASQYLIATQKETPADAEVISHKLMLRAGLIRKMASGLYNWLPLGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ +P +Q A++W ESGR+ YG E+LR+ DR+D+A GPTHEEV+TD+ R+ Sbjct: 61 MDKSGAQEVLMPVVQPAEIWQESGRWQQYGPELLRINDRHDRAFCLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF ++ E + +Y+ M + Sbjct: 121 EVKSYKQLPLNFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHISQESLQETYDVMHRT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R+GL+ P+ A++G IGG SHEF VLAD+GE + S D Sbjct: 181 YCNIFDRIGLQYRPVLADTGSIGGSASHEFHVLADSGEDDIAFSSD 226 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/172 (40%), Positives = 100/172 (58%), Gaps = 4/172 (2%) Query: 254 APYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y+ D+ N + D P K RGIEVGHIF GTKYS M AT +GKD Sbjct: 380 ASYSRVEDLRNVVVGDPSPCGKGTIEIKRGIEVGHIFQLGTKYSAAMKATVLDENGKDVT 439 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYA 370 + MG YGIG R+VA+ IE +HD GIIWPD++APF+++++ I H ++ACE +Y Sbjct: 440 MTMGCYGIGVSRIVASAIEQNHDDNGIIWPDAIAPFQLAIVPINMHKSDAVKEACETLYD 499 Query: 371 RLSKVGCDVFW-DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + G DV D+ ++G+ A +L+G P +V++G + + +E K R Sbjct: 500 QCQTAGIDVLLMDEPKARLGAMLADVELVGIPHRVVIGDRGLEQGNIEYKGR 551 >gi|82701584|ref|YP_411150.1| prolyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] gi|114152221|sp|Q2YBW3|SYP_NITMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|82409649|gb|ABB73758.1| prolyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] Length = 569 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 125/225 (55%), Positives = 165/225 (73%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +F+ L+E P +AE+ SHKLMLR G+I + G+Y+W+PLG K L V I+REE Sbjct: 1 MRASGFFISTLKEAPAEAELISHKLMLRAGIIRRLGSGLYTWMPLGLKVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW E+GR+D +G +ML++ DR+++ +GPTHEEV+TDI R Sbjct: 61 MDAAGALELLMPAVQPAELWRETGRWDVFGPQMLKIRDRHERDFCFGPTHEEVITDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M V+ Sbjct: 121 EIKSYRQLPLNFYQIQTKFRDEVRPRFGVMRAREFVMKDAYSFHTDIPSLEETYQAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCS 224 Y RIF RLGLK P++A++G IGG SHEF VLAD+GE + FCS Sbjct: 181 YCRIFDRLGLKFRPVKADTGAIGGSSSHEFHVLADSGEDAIAFCS 225 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 100/169 (59%), Gaps = 3/169 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIEVGHIF TKYS M A + G+ ++MG YGIG R+VAA IE +HD +GI Sbjct: 402 CRGIEVGHIFQLLTKYSEAMKANYLDESGQARPMEMGCYGIGVSRIVAAAIEQNHDERGI 461 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 I+P ++APF++ +I I K + +V R EK+YA LS VG +V DD ++ G FA + Sbjct: 462 IFPAAMAPFQVVIIPIGLKKNAEV-RAEAEKLYATLSSVGIEVLLDDRDDRPGVMFADME 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 L+G P +V+VG + + + E + R E + L E+ ++ + + Sbjct: 521 LIGIPHRVVVGERGLKEGNAEYRGRRDEKSEVVPLPEIADFIKSKLAGG 569 >gi|257094575|ref|YP_003168216.1| prolyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047099|gb|ACV36287.1| prolyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 574 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 125/224 (55%), Positives = 163/224 (72%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL L+E P DAEI SH+LMLR GMI + + GIY+W+P+G + + V I+REE Sbjct: 1 MRTSRFFLSTLKEAPSDAEIISHQLMLRAGMIKRLAGGIYTWMPIGLRVMRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+S+P +Q A+LW ESGR++ YG E+LR DR+ + + GPTHEEV+TD+ R Sbjct: 61 MDRAGAIELSMPAVQPAELWQESGRWEKYGPELLRCKDRHQRDFVIGPTHEEVITDVVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQ+Q+KFRDE+RPRFGVMR REFLMKD YSF E + Y MF + Sbjct: 121 EVKSYRQLPLHFYQVQVKFRDEIRPRFGVMRGREFLMKDGYSFHSGFEDLQREYRNMFET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF RLGL+ + A++G IGG SHEF VLAD+GE + +C Sbjct: 181 YTRIFTRLGLQFRAVAADTGAIGGTGSHEFHVLADSGEDALAYC 224 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 3/169 (1%) Query: 257 AATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D P+ + RGIEVGHIF T+Y+ + TF G+ ++M Sbjct: 383 AVVADLRNVVAGDPSPDGRGTLELCRGIEVGHIFQLRTRYAEALKCTFLDESGQSRVMEM 442 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLS 373 G YGIG R+V A IE HD +GI++P ++APF++ ++ + A Q RDA + +Y L Sbjct: 443 GCYGIGVTRIVGAAIEQGHDERGIVFPAAIAPFEVCIVPMGYAKSQAVRDAADALYGELM 502 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + G DV DD E+ G FA +L+G P +V+VG + ++ K+E K R+ Sbjct: 503 REGIDVLLDDRNERPGVMFAEMELIGVPHRVVVGERGLAQGKLEYKGRV 551 >gi|167740276|ref|ZP_02413050.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 14] Length = 568 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 127/219 (57%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 ++E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE NR GAIE+ Sbjct: 1 MKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELL 60 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ IKSYR +P Sbjct: 61 MPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPV 120 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ +Y+RIF R+GL Sbjct: 121 NFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTRIGL 180 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 + P+ A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 EFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 219 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 70/171 (40%), Positives = 102/171 (59%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 372 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 431 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGI+W +++APF++ L + +D+ R+A +K+YA Sbjct: 432 VMGCYGIGITRILGAAIEQNFDDKGIVWAEAIAPFEVVLCPM-GYDRSDAVREAADKLYA 490 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 491 DLAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 541 >gi|167817496|ref|ZP_02449176.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 91] gi|167847384|ref|ZP_02472892.1| prolyl-tRNA synthetase [Burkholderia pseudomallei B7210] gi|167904356|ref|ZP_02491561.1| prolyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177] gi|167912616|ref|ZP_02499707.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 112] Length = 568 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 127/219 (57%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 ++E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE NR GAIE+ Sbjct: 1 MKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELL 60 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ IKSYR +P Sbjct: 61 MPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPV 120 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ +Y+RIF R+GL Sbjct: 121 NFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTRIGL 180 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 + P+ A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 EFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 219 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 372 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 431 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGI+WP+++APF++ L + +D+ R+A +K+YA Sbjct: 432 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPM-GYDRSDAVREAADKLYA 490 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 491 DLAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGR 541 >gi|307544897|ref|YP_003897376.1| prolyl-tRNA synthetase [Halomonas elongata DSM 2581] gi|307216921|emb|CBV42191.1| prolyl-tRNA synthetase [Halomonas elongata DSM 2581] Length = 573 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 125/224 (55%), Positives = 164/224 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + L+E P DA+I SH+LMLR GMI + + G+Y+WLPLG + L V I+REE Sbjct: 1 MRASQLLIATLKETPADADIVSHQLMLRAGMIRRLNAGLYTWLPLGLRTLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q A+LW ESGR+D YG +LR+ DR+D+ YGPTHEEV+TD+ R+ Sbjct: 61 MNRAGAQEVLMPAIQPAELWQESGRWDQYGNLLLRIRDRHDRDFCYGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ +P FYQIQ KFRDE RPRFGVMR+REF+MKDAYSFD+ G + SY+ M+ + Sbjct: 121 ELRSYKQVPSNFYQIQTKFRDETRPRFGVMRAREFIMKDAYSFDVDQAGLQRSYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y+RIF RLGL + A++G IGG SHEF VLAD+GE V S Sbjct: 181 YVRIFTRLGLDFRAVEADNGDIGGSGSHEFQVLADSGEDAVVFS 224 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 101/166 (60%), Gaps = 1/166 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GTKYS M+AT +G+ + MG YGIG RVVAA IE +HD GI Sbjct: 407 ARGIEVGHVFQLGTKYSTAMNATVLDDNGQAVPLLMGCYGIGVTRVVAAAIEQNHDDAGI 466 Query: 339 IWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWPD++APF ++L+ + AH Q RD E++Y LS G DV DD + G +FA +L Sbjct: 467 IWPDAIAPFNVALVPMNAHKSQRVRDESERLYQALSDAGLDVLLDDRDLRPGVRFADQEL 526 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +G P ++++G + + ++E K R + +++VI + + Sbjct: 527 MGIPHRIVIGDRSLDKGELEYKGRRDSEATMIPIDDVIAFLREKIG 572 >gi|258405882|ref|YP_003198624.1| prolyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] gi|257798109|gb|ACV69046.1| prolyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] Length = 579 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 121/221 (54%), Positives = 161/221 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++P L+E P +AE+ SHKL++R GMI + + GIY++LPLG +ALD + ++REE Sbjct: 1 MRLSNAYIPTLKEEPAEAEVVSHKLLVRAGMIRKVTSGIYTFLPLGLRALDKIAHVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G E+ +P +Q DLW E+GR++ YGKE+LRL DR+D+ GPTHEEV+T + R Sbjct: 61 MNRAGCQEIFMPMVQPGDLWKETGRWEYYGKELLRLKDRHDRDYCLGPTHEEVVTSLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G++ SY MF + Sbjct: 121 EVRSYRQLPLNLYQIQTKFRDEIRPRFGLMRCREFIMKDAYSFDRDEAGAQKSYQTMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y R F RLGL+ + A+SG IGG +SHEF+VLA TGE + Sbjct: 181 YTRAFQRLGLQFRAVEADSGAIGGSVSHEFMVLAATGEDTI 221 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 71/163 (43%), Positives = 104/163 (63%), Gaps = 1/163 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGH+F GTKYS PM A + +GK+ + MG YGIG R++AA IE +HD GI+ Sbjct: 404 QGIEVGHVFNLGTKYSAPMQALYLDENGKEREMVMGCYGIGVSRILAAAIEQNHDASGIM 463 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P S+AP++I+L+ + ++ R E Y L + G DV +DD E+ G +F ADL+G Sbjct: 464 FPPSIAPYEIALLCLDTKNEEVRTKAEAFYETLQEQGVDVLYDDRVERPGFKFKDADLMG 523 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN-YASHR 441 PLQV+ G K V+ VE+K R TG + ++ L+ + +AS R Sbjct: 524 LPLQVVFGGKGVARGIVEVKDRRTGEKAELPLDGLAEAFASWR 566 >gi|167895971|ref|ZP_02483373.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 7894] Length = 568 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 127/219 (57%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 ++E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE NR GAIE+ Sbjct: 1 MKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELL 60 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ IKSYR +P Sbjct: 61 MPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPV 120 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ +Y+RIF R+GL Sbjct: 121 NFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTRIGL 180 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 + P+ A++G IGG SHEF V+ADTGE + +C + DF Sbjct: 181 EFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDF 219 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 372 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 431 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE + D KGI+WP+++APF++ L + +D+ R+A +K+YA Sbjct: 432 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPM-GYDRSDAVREAADKLYA 490 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R Sbjct: 491 DLAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYRGR 541 >gi|161723258|ref|YP_094730.2| prolyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|114152207|sp|Q5ZXN7|SYP_LEGPH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 569 Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 168/224 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P DAEIASH+LMLR+GMI + G+Y+W+PLG + L V I+REE Sbjct: 1 MRASQWFLVTQKETPNDAEIASHQLMLRSGMIRKLGSGLYTWMPLGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+T A+E+ +P++Q A+LW E+GR++++G ++L + D N + +GPTHEEV+TDI R+ Sbjct: 61 MNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKDSNQREYCFGPTHEEVITDIMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ E + +Y M+ + Sbjct: 121 ELQSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLSLESLQETYKDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R+GLK + A++G IGG SHEF VLA++GE +F S Sbjct: 181 YCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAESGEDLIFYS 224 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D+ N K D P+ K RGIEVGH+F G KY+ M+A+ G+ Sbjct: 376 AKYDDAYDLRNVKEGDPSPDGKGTLHCCRGIEVGHVFQLGDKYAKAMNASVINEQGQLQT 435 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYA 370 + MG YG+G RVVAA IE HD GIIWP ++APF++++I + A Q ++ E +Y Sbjct: 436 MIMGCYGLGITRVVAAAIEQHHDEHGIIWPQALAPFQVNIIPLNGARSQAVKEQAESLYQ 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G DV DD E+ G FA DL+G P +++V + + VE K R++ + ++ Sbjct: 496 QLKSHGIDVLLDDRNERAGVLFADNDLIGIPHRLVVSERNLEQGCVEYKARISSETQLIN 555 Query: 431 LEEVINY 437 L++V+N+ Sbjct: 556 LDKVVNF 562 >gi|327481520|gb|AEA84830.1| prolyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166] Length = 571 Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 133/278 (47%), Positives = 182/278 (65%), Gaps = 20/278 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DA + SH+LMLR GMI + + G+Y+W+P+G +AL AI+REE Sbjct: 1 MRTSQFLLSTLKETPSDAVVISHQLMLRAGMIRKLASGLYTWMPMGLRALRKAEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+D+ GPTHEEV+TD+ R+ Sbjct: 61 MNKAGALEVLMPAIQPAELWQESGRWEQYGPELLRLKDRHDREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REFLMKDAYSF L+ E + +Y++M + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFHLSQESLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF--------PI 232 Y IF RLGL P++A++G IGG SHEF VLA++GE + S D D+ I Sbjct: 181 YCNIFTRLGLNFRPVQADTGSIGGTGSHEFHVLAESGEDDIAFS-DSSDYAANIEKAEAI 239 Query: 233 PSEN-----------TDFDDIISLNSIVEQWTAPYAAT 259 P E D D ++ +VEQ+ P T Sbjct: 240 PRETERAAPGEELRLIDTPDAKTIAELVEQFGLPVERT 277 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 74/191 (38%), Positives = 116/191 (60%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M+ G +GK + Sbjct: 378 PLPQVADLRNVVAGDPSPDGKGSLVIKRGIEVGHIFQLGTKYSEAMNCQVMGENGKPATL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE ++D +GI+WPD++APF+I+L+ +K + R+A +K+YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNYDERGILWPDALAPFQIALVPMKYETEAVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + ++D +E KHR + ++ Sbjct: 498 TAAGYEVLLDDRDKKTSPGVKFADMELIGIPHRIVVSDRGLADGMLEYKHRRDAQPQPVA 557 Query: 431 LEEVINYASHR 441 E++++ + R Sbjct: 558 ASEILSFINSR 568 >gi|307609489|emb|CBW98986.1| prolyl-tRNA synthetase [Legionella pneumophila 130b] Length = 569 Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 168/224 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P DAEIASH+LMLR+GMI + G+Y+W+PLG + L V I+REE Sbjct: 1 MRASQWFLVTQKETPNDAEIASHQLMLRSGMIRKLGSGLYTWMPLGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+T A+E+ +P++Q A+LW E+GR++++G ++L + D N + +GPTHEEV+TDI R+ Sbjct: 61 MNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKDSNQREYCFGPTHEEVITDIMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ E + +Y M+ + Sbjct: 121 ELQSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLSLESLQETYKDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R+GLK + A++G IGG SHEF VLA++GE +F S Sbjct: 181 YCRIFDRMGLKYRAVEADTGAIGGSTSHEFQVLAESGEDLIFYS 224 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D+ N K D P+ + RGIEVGH+F G KY+ M+A+ G+ Sbjct: 376 AKYDDAYDLRNVKEGDPSPDGRGTLHCCRGIEVGHVFQLGDKYAKAMNASVINEQGQLQT 435 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYA 370 + MG YG+G RVVAA IE HD GIIWP ++APF++++I + A Q ++ E +Y Sbjct: 436 MIMGCYGLGITRVVAAAIEQHHDEHGIIWPQALAPFQVNIIPLNGARSQAVKEQAESLYQ 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G DV DD E+ G FA DL+G P +++V + + +E K R + + ++ Sbjct: 496 QLKSHGIDVLLDDRNERAGVLFADNDLIGIPHRLVVSERNLEQGCIEYKSRTSSETQLIN 555 Query: 431 LEEVINY 437 L++V+N+ Sbjct: 556 LDKVVNF 562 >gi|127513524|ref|YP_001094721.1| prolyl-tRNA synthetase [Shewanella loihica PV-4] gi|166980157|sp|A3QG64|SYP_SHELP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|126638819|gb|ABO24462.1| prolyl-tRNA synthetase [Shewanella loihica PV-4] Length = 569 Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 126/243 (51%), Positives = 167/243 (68%), Gaps = 8/243 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YSWLP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVVSHQLMLRAGMIRRNASGLYSWLPSGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 61 MNNAGAVEILMPMVQPADLWVETGRWDKFGPELLRFQDRHNRDFVLGPTHEEVITDIIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDQETMDDTYQAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF--------MDFPI 232 Y I R+GL P+ A++G IGG +SHEF VLA++GE + S + + P+ Sbjct: 181 YSNILGRMGLAFRPVLADTGSIGGSMSHEFHVLANSGEDLIAYSTESDYAANIEKAEAPM 240 Query: 233 PSE 235 P+E Sbjct: 241 PTE 243 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 71/186 (38%), Positives = 110/186 (59%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P K RGIEVGHIF GT YS M A+ +GK + Sbjct: 379 PQAEVADLRNVIEGEPSPCGKGTIGLLRGIEVGHIFQLGTNYSKAMGASVLDENGKAQTL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE +HD +GIIWP ++APFK+ ++ + H +D EK+Y+ Sbjct: 439 LMGCYGVGVSRIVAAAIEQNHDDRGIIWPAAIAPFKVGILPMNMHKSHRIKDMAEKLYSD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS G +V +DD E+ G FA +L+G P +++G + + + E K+R TG ++++ Sbjct: 499 LSDAGIEVLFDDRKERPGVMFADMELIGLPHVIVIGERNIDNGVFEYKNRRTGEKQEIPF 558 Query: 432 EEVINY 437 EE++++ Sbjct: 559 EEIVDF 564 >gi|303326973|ref|ZP_07357415.1| proline--tRNA ligase [Desulfovibrio sp. 3_1_syn3] gi|302862961|gb|EFL85893.1| proline--tRNA ligase [Desulfovibrio sp. 3_1_syn3] Length = 580 Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 164/224 (73%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++P L+E+P DAE+ SHKL+LR GM+ + + G+Y +LPLG K +D + ++REE Sbjct: 1 MRFSSCYIPTLKESPADAEVVSHKLLLRAGMVRRLTSGLYIYLPLGLKIIDKIARVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +G E+ +P +Q ADLW E+GR++ YGKE+LR DRN++ GPTHEEV+TD+ R Sbjct: 61 INASGFQELLMPMVQPADLWKETGRWEHYGKELLRFKDRNERDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSFD G++ SY M+ + Sbjct: 121 EVRSYRQLPVRLYQIQSKFRDEIRPRFGLMRGREFMMKDGYSFDADIAGAEESYKLMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y RIF RLGLK + A++G IGG+ SHEF+VLADTGE T FC Sbjct: 181 YTRIFKRLGLKFRAVEADTGSIGGNFSHEFMVLADTGEDTIAFC 224 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 69/151 (45%), Positives = 93/151 (61%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M A F +GK+ + MG YGIG RV AA IE +HD GI+ Sbjct: 406 KGIEVGHIFMLGLKYSESMHAAFLDENGKEKLMIMGCYGIGVSRVAAAAIEQNHDENGIV 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P VAPF+ L+N+ + E+IYA L +G DV DD E+ G +F ADLLG Sbjct: 466 FPPPVAPFECILLNLDPRNAEVTAKAEEIYAMLRDMGVDVLLDDREERPGVKFKDADLLG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 P+Q++VG K ++ VE K R +G + ++S Sbjct: 526 APMQLVVGGKGLARGIVECKDRRSGEKGELS 556 >gi|54296718|ref|YP_123087.1| prolyl-tRNA synthetase [Legionella pneumophila str. Paris] gi|81822631|sp|Q5X756|SYP_LEGPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|53750503|emb|CAH11897.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA synthesis factor) [Legionella pneumophila str. Paris] Length = 569 Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 168/224 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P DAEIASH+LMLR+GMI + G+Y+W+PLG + L V I+REE Sbjct: 1 MRASQWFLVTQKETPNDAEIASHQLMLRSGMIRKLGSGLYTWMPLGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+T A+E+ +P++Q A+LW E+GR++++G ++L + D N + +GPTHEEV+TDI R+ Sbjct: 61 MNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKDSNQREYCFGPTHEEVITDIMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ E + +Y M+ + Sbjct: 121 ELQSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLSLESLQETYKDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R+GLK + A++G IGG SHEF VLA++GE +F S Sbjct: 181 YCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAESGEDLIFYS 224 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D+ N K D P+ + RGIEVGH+F G KY+ M+A+ G+ Sbjct: 376 AKYDDAYDLRNVKEGDQSPDGRGTLHCCRGIEVGHVFQLGDKYAKAMNASVINEQGQLQT 435 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYA 370 + MG YG+G RVVAA IE HD GIIWP ++APF++++I + A Q ++ E +Y Sbjct: 436 MIMGCYGLGITRVVAAAIEQHHDEHGIIWPQALAPFQVNIIPLNGARSQTVKEQAESLYQ 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G DV DD E+ G FA DL+G P +++V + + +E K R + + ++ Sbjct: 496 QLKSHGIDVLLDDRNERAGVLFADNDLIGIPHRLVVSERNLEQGCIEYKSRTSSETQLIN 555 Query: 431 LEEVINY 437 L++V+N+ Sbjct: 556 LDKVVNF 562 >gi|54293678|ref|YP_126093.1| prolyl-tRNA synthetase [Legionella pneumophila str. Lens] gi|81822437|sp|Q5WYK5|SYP_LEGPL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|53753510|emb|CAH14965.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA synthesis factor) [Legionella pneumophila str. Lens] Length = 569 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 168/224 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P DAEIASH+LMLR+GMI + G+Y+W+PLG + L V I+REE Sbjct: 1 MRASQWFLVTQKETPNDAEIASHQLMLRSGMIRKLGSGLYTWMPLGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+T A+E+ +P++Q A+LW E+GR++++G ++L + D N + +GPTHEEV+TDI R+ Sbjct: 61 MNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKDSNQREYCFGPTHEEVITDIMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ E + +Y M+ + Sbjct: 121 ELQSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLSLESLQETYKDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R+GLK + A++G IGG SHEF VLA++GE +F S Sbjct: 181 YCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAESGEDLIFYS 224 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 3/187 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D+ N K D P+ + RGIEVGH+F G KY+ M+A+ G+ Sbjct: 376 AKYDDAYDLRNVKEGDPSPDGRGTLHCCRGIEVGHVFQLGDKYAKAMNASVINEQGQLQT 435 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYA 370 + MG YG+G RVVAA IE HD GIIWP ++APF++++I + A ++ E +Y Sbjct: 436 MIMGCYGLGITRVVAAAIEQHHDEHGIIWPQALAPFQVNIIPLNGARSHAVKEQAESLYQ 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G DV DD E+ G FA DL+G P +++V + + +E K R + + ++ Sbjct: 496 QLKSHGIDVLLDDRNERAGVLFADNDLIGIPHRLVVSERNLEQGCIEYKSRTSSETQLIN 555 Query: 431 LEEVINY 437 L++V+N+ Sbjct: 556 LDKVVNF 562 >gi|51597293|ref|YP_071484.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|186896398|ref|YP_001873510.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|81825738|sp|Q667L4|SYP_YERPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701360|sp|B2JZ09|SYP_YERPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|51590575|emb|CAH22216.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|186699424|gb|ACC90053.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] Length = 572 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 131/277 (47%), Positives = 176/277 (63%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDELRPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDELRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y +IF R+ L + A++G IGG SHEF VLA++GE + S +F + Sbjct: 181 YSKIFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAANIEFAEALA 240 Query: 233 PSEN----------TDFDDIISLNSIVEQWTAPYAAT 259 P+E D + ++ +VEQ+ P T Sbjct: 241 PTEPRAPATEELRIVDTPNAKTIAELVEQFKLPIEKT 277 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 67/159 (42%), Positives = 101/159 (63%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M AT +G DG++ + MG YGIG RVVAA IE +HD +GII Sbjct: 407 RGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVMTMGCYGIGVSRVVAAAIEQNHDDRGII 466 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H ++ E++Y L G DV DD E+ G FA +L+ Sbjct: 467 WPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSHGIDVILDDRKERPGVMFADMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P +++G + + +VE K+R G ++ + E++ + Sbjct: 527 GVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIVEF 565 >gi|212703017|ref|ZP_03311145.1| hypothetical protein DESPIG_01055 [Desulfovibrio piger ATCC 29098] gi|212673605|gb|EEB34088.1| hypothetical protein DESPIG_01055 [Desulfovibrio piger ATCC 29098] Length = 576 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 129/267 (48%), Positives = 179/267 (67%), Gaps = 8/267 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++P L+E+P +AE+ SHKL+LR GM+ + + G+Y +LPLG KAL+NV ++REE Sbjct: 1 MRFSSTYIPTLKESPSEAEVVSHKLLLRAGMVRKLTSGVYIYLPLGLKALENVQRVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P + DLW E+GR++ YGKE+LR DRND+ GPTHEEV+TD+ R Sbjct: 61 MDAAGFSELLMPMVIPGDLWKETGRWEYYGKELLRFKDRNDRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD + G+ SY M+ + Sbjct: 121 EVRSYRQLPVRLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDSSDAGADESYKLMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDF 239 Y RIF RLGL+ + A++G IGG+ SHEF+VLADTGE T C++ + N + Sbjct: 181 YCRIFKRLGLRFRAVEADTGSIGGNFSHEFMVLADTGEDTIAACTECSY-----AANVER 235 Query: 240 DDIISLNSIVEQWTAPY--AATSDVHN 264 +++ + + APY AT H Sbjct: 236 AEVVWNGTPCTETCAPYEKVATPAAHT 262 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 68/153 (44%), Positives = 97/153 (63%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF GTKYS M A + +GK++ + MG YGIG RVVA+ IE +HD GII Sbjct: 402 KGIEVGHIFKLGTKYSDAMHAVYLDENGKENVMIMGCYGIGISRVVASAIEQNHDEHGII 461 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +VAP + L+N+ + R E+IYA L K G V DD E+ G +F ADL+G Sbjct: 462 FPPTVAPVECILLNLDPGKEEVRAKAEEIYAMLCKAGVTVLLDDREERPGVKFKDADLIG 521 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 P+Q+++G K +S +E K R TG + ++ ++ Sbjct: 522 APMQLVLGGKGLSRGVLECKDRRTGEKGELPVD 554 >gi|238792729|ref|ZP_04636360.1| Prolyl-tRNA synthetase [Yersinia intermedia ATCC 29909] gi|238727837|gb|EEQ19360.1| Prolyl-tRNA synthetase [Yersinia intermedia ATCC 29909] Length = 572 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y ++F R+ L + A++G IGG SHEF VLA++GE + S Sbjct: 181 YSKVFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFS 224 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 75/186 (40%), Positives = 112/186 (60%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQIADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++YA Sbjct: 440 TMGCYGIGVSRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + +VE K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKT 559 Query: 432 EEVINY 437 E+I++ Sbjct: 560 SEIIDF 565 >gi|52628042|gb|AAU26783.1| prolyl-tRNA synthase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 589 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 168/224 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P DAEIASH+LMLR+GMI + G+Y+W+PLG + L V I+REE Sbjct: 21 MRASQWFLVTQKETPNDAEIASHQLMLRSGMIRKLGSGLYTWMPLGLRVLRKVENIVREE 80 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+T A+E+ +P++Q A+LW E+GR++++G ++L + D N + +GPTHEEV+TDI R+ Sbjct: 81 MNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKDSNQREYCFGPTHEEVITDIMRN 140 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ E + +Y M+ + Sbjct: 141 ELQSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLSLESLQETYKDMYQA 200 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R+GLK + A++G IGG SHEF VLA++GE +F S Sbjct: 201 YCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAESGEDLIFYS 244 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D+ N K D P+ K RGIEVGH+F G KY+ M+A+ G+ Sbjct: 396 AKYDDAYDLRNVKEGDPSPDGKGTLHCCRGIEVGHVFQLGDKYAKAMNASVINEQGQLQT 455 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYA 370 + MG YG+G RVVAA IE HD GIIWP ++APF++++I + A Q ++ E +Y Sbjct: 456 MIMGCYGLGITRVVAAAIEQHHDEHGIIWPQALAPFQVNIIPLNGARSQAVKEQAESLYQ 515 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G DV DD E+ G FA DL+G P +++V + + VE K R++ + ++ Sbjct: 516 QLKSHGIDVLLDDRNERAGVLFADNDLIGIPHRLVVSERNLEQGCVEYKARISSETQLIN 575 Query: 431 LEEVINY 437 L++V+N+ Sbjct: 576 LDKVVNF 582 >gi|148360654|ref|YP_001251861.1| prolyl-tRNA synthase [Legionella pneumophila str. Corby] gi|296106282|ref|YP_003617982.1| prolyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] gi|166980133|sp|A5IGL5|SYP_LEGPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148282427|gb|ABQ56515.1| prolyl-tRNA synthase [Legionella pneumophila str. Corby] gi|295648183|gb|ADG24030.1| prolyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] Length = 569 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 168/224 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P DAEIASH+LMLR+GMI + G+Y+W+PLG + L V I+REE Sbjct: 1 MRASQWFLVTQKETPNDAEIASHQLMLRSGMIRKLGSGLYTWMPLGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+T A+E+ +P++Q A+LW E+GR++++G ++L + D N + +GPTHEEV+TDI R+ Sbjct: 61 MNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKDSNQREYCFGPTHEEVITDIMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ E + +Y M+ + Sbjct: 121 ELQSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLSIESLQETYKDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R+GLK + A++G IGG SHEF VLA++GE +F S Sbjct: 181 YCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAESGEDLIFYS 224 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D+ N K D P+ + + RGIEVGH+F G KY+ M+A+ G+ Sbjct: 376 AKYDDAYDLRNVKEGDPSPDGRGMLHCCRGIEVGHVFQLGDKYAKAMNASVINEQGQLQT 435 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYA 370 + MG YG+G RVVAA IE HD GIIWP ++APF++++I + A Q ++ E +Y Sbjct: 436 MIMGCYGLGITRVVAAAIEQHHDEHGIIWPQALAPFQVNIIPLNGARSQTVKEQAESLYQ 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G DV DD E+ G FA DL+G P +++V + + +E K R + + ++ Sbjct: 496 QLKSHGIDVLLDDRNERAGVLFADNDLIGIPHRLVVSERNLEQGCIEYKSRTSSETQLIN 555 Query: 431 LEEVINY 437 L++V+N+ Sbjct: 556 LDKVVNF 562 >gi|304413226|ref|ZP_07394699.1| Prolyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] gi|304284069|gb|EFL92462.1| Prolyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] Length = 597 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 125/224 (55%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE SHKLMLR GMI Q + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLATQKEIPADAESISHKLMLRAGMIQQVTSGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR+D YG E+LR DR+++ + GPTHEEV+T + R+ Sbjct: 61 MNNAGAIEVSMPMVQPADLWQESGRWDKYGLELLRFVDRHERHFVLGPTHEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP +QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M + Sbjct: 121 QIKSYKQLPLNLFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQKTYDTMHAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R+GL ++A++G IGG SHEF VLAD+GE + S Sbjct: 181 YSKIFSRIGLDFRAVQADTGSIGGSRSHEFQVLADSGEDDIVFS 224 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 115/195 (58%), Gaps = 3/195 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N + D+ P+ + + RGIEVGHIF GT+YS M+AT + +GK + Sbjct: 385 PLPQVADIRNVVVGDASPDGQGTLLLKRGIEVGHIFQLGTQYSKIMNATIENKEGKKQAI 444 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE ++D GI+WP+++APF+++++ + H ++ E +Y Sbjct: 445 TMGCYGIGVSRIVAAAIEQNYDEDGILWPEAIAPFQVAILPMNMHKSFRVQEQAEALYKA 504 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS G +V DD E+ G F +L+G P +++ + + +VE K+R +G + + Sbjct: 505 LSDHGVEVILDDRCERPGVMFTDMELIGVPNSIVISERNHDNQEVEYKNRRSGETQMIKS 564 Query: 432 EEVINYASHRFSNNR 446 +++I++ + + +R Sbjct: 565 DKIIDFLIAQITKHR 579 >gi|317129168|ref|YP_004095450.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315474116|gb|ADU30719.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 566 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 132/277 (47%), Positives = 181/277 (65%), Gaps = 14/277 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S + P L++ P DAE+ SH+LMLR G+I Q + G+YS LPLG KAL V AI+REE Sbjct: 1 MKQSTFLAPTLRDVPSDAEVTSHQLMLRAGLIRQSTSGVYSLLPLGLKALKKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA EM +P +Q ++LW ESGR+++YG E++RL DR+ + GPTHEEV+T + R Sbjct: 61 MNRAGAQEMLMPAIQQSELWKESGRWEAYGPELMRLHDRHGREFALGPTHEEVITTVVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP T YQIQ KFRDE RPRFGV+RSREFLMKDAYSFD + EG SYNKM+ + Sbjct: 121 DVKTYKKLPMTLYQIQTKFRDERRPRFGVLRSREFLMKDAYSFDTSQEGLDESYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL++ GE + S+++ F Sbjct: 181 YTNIFTRCGLDFRAVVADSGAMGGKDTHEFMVLSEIGEDTIAY----------SDSSSFA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 I + + Y T+++ EK + PE K + Sbjct: 231 ANIEIAPV----NVEYETTNELLKEKELVNTPEKKSI 263 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 68/167 (40%), Positives = 97/167 (58%), Gaps = 3/167 (1%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N + D P+ K GIEVGH+F GT+YS M A + +GK+ + MG Y Sbjct: 382 ADLRNIQEGDPSPDGKGTIRFKEGIEVGHVFKLGTRYSEAMGAMYLDENGKNKPMIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R +AA+IE HD GIIWP SV PF + ++ I + + E++Y L++ Sbjct: 442 GIGVTRTLAAIIEQFHDESGIIWPTSVTPFDVHIVPINMKQEEQKQLAEELYNELTEERL 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +V DD E+ G +F ADL GFP++V VG K ++ VE+K R TG Sbjct: 502 EVLIDDRPERPGVKFKDADLYGFPVRVTVGKK-ANEGVVELKVRKTG 547 >gi|119476901|ref|ZP_01617182.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] gi|119449708|gb|EAW30945.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] Length = 576 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 125/230 (54%), Positives = 166/230 (72%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ + ++E P DA + SH+LMLR GMI + S G+YSWLP+G + L V AI+REE Sbjct: 1 MRASQFLIATVKETPSDAVVISHQLMLRAGMIRKLSSGLYSWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P +Q ++LW ESGR+ YG E+LR+ DR++ + GPTHEEV+TD+ R+ Sbjct: 61 MNKAGAQELLMPVVQPSNLWQESGRWQQYGPELLRITDRHNNSFCLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF E + +Y M + Sbjct: 121 EIKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHNDQESLQQTYELMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y +IF RLGL+ P+ A++G IGG+ SHEF VLAD+GE + S D DF Sbjct: 181 YTKIFTRLGLRFRPVVADTGSIGGNASHEFHVLADSGEDDIAFS-DSSDF 229 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/180 (38%), Positives = 108/180 (60%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P+ K + RGIEVGHIF G KY+ + AT +GKD + MG YG Sbjct: 389 DIRDVVAGDPSPDGKGILHIKRGIEVGHIFQLGAKYAEALKATVLNENGKDQTILMGCYG 448 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGC 377 IG R+VAA IE ++D KGIIWP S+APF+I++I + V + K+Y +LS++G Sbjct: 449 IGMTRIVAAAIEQNNDEKGIIWPASIAPFQIAIIPLNMQKSVDVAEQSNKLYQQLSELGY 508 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA +L+G P ++++G + + D K+E K R + + + +I++ Sbjct: 509 EVLLDDRNERPGVKFADMELIGIPHRIVIGDRGLKDGKMEYKGRQDSENQHIDISNIIDF 568 >gi|157962683|ref|YP_001502717.1| prolyl-tRNA synthetase [Shewanella pealeana ATCC 700345] gi|189083515|sp|A8H6J5|SYP_SHEPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157847683|gb|ABV88182.1| prolyl-tRNA synthetase [Shewanella pealeana ATCC 700345] Length = 570 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 124/244 (50%), Positives = 168/244 (68%), Gaps = 8/244 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YSWLP G + L + AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVVSHQLMLRAGMIRRNASGLYSWLPTGLRVLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G++E+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 61 MNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQDRHNRDFVLGPTHEEVITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E +Y MF + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHIDQETMDETYEAMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF--------MDFPI 232 Y I RLGL P+ A++G IGG +SHEF VLA++GE + S + + P+ Sbjct: 181 YSNILTRLGLAFRPVMADTGSIGGSMSHEFHVLANSGEDLIAYSTESDYAANIEKCEAPL 240 Query: 233 PSEN 236 P+E Sbjct: 241 PTET 244 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 109/186 (58%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A D+ N + P K A RGIEVGHIF GT YS M+A +GK + Sbjct: 379 PEAPAFDLRNIIEGEPSPCGKGTIALLRGIEVGHIFQLGTNYSEAMNANVLDQNGKSQTL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE ++D +GIIWP+++APF + ++ + H +D E++Y Sbjct: 439 LMGCYGVGVSRMVAAAIEQNNDDRGIIWPEAIAPFTVGILPMNMHKSHRVKDIAEQLYQD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G +V +DD E+ G FA +L+G P V++G + + + E K+R TG ++D+ L Sbjct: 499 LNDAGIEVMFDDRKERPGVMFADMELIGIPHVVVIGDRNIDNGMFEYKNRRTGEKQDIPL 558 Query: 432 EEVINY 437 ++++ + Sbjct: 559 DQIVEF 564 >gi|212636240|ref|YP_002312765.1| prolyl-tRNA synthetase [Shewanella piezotolerans WP3] gi|212557724|gb|ACJ30178.1| Prolyl-tRNA synthetase, bacterial [Shewanella piezotolerans WP3] Length = 596 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 131/267 (49%), Positives = 174/267 (65%), Gaps = 13/267 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YSWLP G + L + AI+REE Sbjct: 27 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSWLPTGLRVLRKIEAIVREE 86 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G++E+ +P +Q ADLW E+GR+D +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 87 MNKAGSVEILMPMVQPADLWQETGRFDKFGPELLRFQDRHNRDFVLGPTHEEVITDIVRK 146 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E +Y MF + Sbjct: 147 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLEQECMDETYEAMFQA 206 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF--------MDFPI 232 Y I RLGL P+ A++G IGG LSHEF VLA++GE + S + + P+ Sbjct: 207 YNNILTRLGLSFRPVMADTGSIGGSLSHEFHVLANSGEDLIAYSTESDYAANIEKCEAPM 266 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAAT 259 P+E + S + PYA T Sbjct: 267 PTETRQ-----AATSEMTLVDTPYAKT 288 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A D+ N ++ P K A RGIEVGHIF G+ YS M A +GK + Sbjct: 405 PSAPAFDLRNIIEGEASPCGKGTIALLRGIEVGHIFQLGSNYSEAMHANVLDQNGKSKTL 464 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE +HD +GIIWP+++APF++ ++ + H +D E++Y Sbjct: 465 LMGCYGVGVSRMVAAAIEQNHDDRGIIWPEAIAPFQVGILPMNMHKSHRVKDMAEQLYQD 524 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G +V +DD E+ G FA +L+G P V++G + + + E K+R TG ++D+ Sbjct: 525 LTDAGMEVLFDDRKERAGVMFADMELVGLPNVVVIGDRNIDNGVFEYKNRRTGEKQDVPF 584 Query: 432 EEVINY 437 ++++ + Sbjct: 585 DQIVEF 590 >gi|167624874|ref|YP_001675168.1| prolyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] gi|189083514|sp|B0TNJ5|SYP_SHEHH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167354896|gb|ABZ77509.1| prolyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] Length = 570 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 124/244 (50%), Positives = 168/244 (68%), Gaps = 8/244 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YSWLP G + L + AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVVSHQLMLRAGMIRRNASGLYSWLPTGLRVLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G++E+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 61 MNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQDRHNRDFVLGPTHEEVITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E +Y MF + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHIDQETMDETYEAMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF--------MDFPI 232 Y I RLGL P+ A++G IGG +SHEF VLA++GE + S + + P+ Sbjct: 181 YNNILTRLGLSFRPVMADTGSIGGSMSHEFHVLANSGEDLIAYSTESDYAANIEKCEAPL 240 Query: 233 PSEN 236 P+E Sbjct: 241 PTET 244 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P AA D+ N + P K V A RGIEVGHIF GT YS M+A +GK + Sbjct: 379 PEAAAFDLRNIIEGEPSPCGKGVIALLRGIEVGHIFQLGTNYSEAMNANVLDQNGKSKTL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE ++D +GIIWPD++APF + ++ + H +D E++Y Sbjct: 439 LMGCYGVGVSRMVAAAIEQNNDDRGIIWPDAIAPFTVGILPMNMHKSHRVKDIAEQLYQD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G +V +DD E+ G FA +L+G P V++G + + + E K+R TG ++D+ L Sbjct: 499 LNDAGIEVMFDDRKERPGVMFADMELIGIPHVVVIGDRNIDNGMFEYKNRRTGEKQDIPL 558 Query: 432 EEVINY 437 +++ + Sbjct: 559 GDIVEF 564 >gi|255320540|ref|ZP_05361720.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|262379097|ref|ZP_06072253.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SH164] gi|255302390|gb|EET81627.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|262298554|gb|EEY86467.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SH164] Length = 571 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L+ V AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGVRVLNKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E +P Q A LW ESGRY YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRAGALETFMPVTQPASLWEESGRYVQYGPELLRFNDRHTNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 ELKSYKQLPINFYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHVDQASLQETYDVMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YCRIFSRLGLDFRPVQADTGSIGGSGSHEFHVLASSGEDDIAFSTE 226 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 3/171 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A + D+ N D P+ K RGIEVGHIF G KYS + G DGK Sbjct: 382 ASFTEVYDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEALGCKVLGEDGKPLT 441 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYA 370 V MG YGIG RV+A+ IE ++D KGIIWP ++APF+++++ + AH +A E +Y Sbjct: 442 VTMGCYGIGVTRVIASAIEQNYDEKGIIWPAAIAPFEVAIVPMNAHKSPRTLEAAEALYI 501 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD E+ G +F+ +L G P ++++G K + E K R Sbjct: 502 ELQAQGFDVLLDDRNERPGVKFSDLELTGIPHRIVIGEKGLDAGTFEYKGR 552 >gi|157376262|ref|YP_001474862.1| prolyl-tRNA synthetase [Shewanella sediminis HAW-EB3] gi|157318636|gb|ABV37734.1| prolyl-tRNA synthetase [Shewanella sediminis HAW-EB3] Length = 584 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 126/244 (51%), Positives = 168/244 (68%), Gaps = 8/244 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P DAE+ SH+LMLR GMI +++ G+YSWLP G + L V AI+REE Sbjct: 16 MRVSKYLLSTQKETPADAEVISHQLMLRAGMIRRNASGLYSWLPTGLRVLRKVEAIVREE 75 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G++E+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 76 MNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQDRHNRDFVLGPTHEEVITDIVRK 135 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E +Y MF + Sbjct: 136 EVNSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDQETMDETYETMFQA 195 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF--------MDFPI 232 Y I RLGL P+ A++G IGG +SHEF VLA++GE + S + + P+ Sbjct: 196 YNNILTRLGLAFRPVMADTGSIGGSMSHEFHVLANSGEDLIAYSTESDYAANIEKAEAPM 255 Query: 233 PSEN 236 P+E Sbjct: 256 PTET 259 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 98/159 (61%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+A +GK + MG YG+G R+VAA IE +HD +GI Sbjct: 421 RGIEVGHIFQLGKNYSEAMNANVLDHNGKAQTLLMGCYGVGVSRMVAAAIEQNHDDRGIT 480 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF++ ++ + H +D EK+Y + G +V +DD E+ G FA +L+ Sbjct: 481 WPDAIAPFRVGILPMNMHKSHRVKDMAEKLYQDMQDAGFEVLFDDRKERAGVMFADMELV 540 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P V++G + + + E K+R TG ++++ +++I++ Sbjct: 541 GLPHVVVIGDRNIDNGVFEYKNRRTGEKQEIPFDQIIDF 579 >gi|90408309|ref|ZP_01216474.1| prolyl-tRNA synthetase [Psychromonas sp. CNPT3] gi|90310610|gb|EAS38730.1| prolyl-tRNA synthetase [Psychromonas sp. CNPT3] Length = 573 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 124/226 (54%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L +E P DA I SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTTQYLLSTQKEAPSDAVIVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q ADLWVE+GR+D YG E+LRL DR+D+ + GPTHEEV+T++ R Sbjct: 61 MERAGAVEILMPVVQPADLWVETGRWDKYGGELLRLKDRHDRDFVLGPTHEEVVTELVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +QIQ KFRDE RPRFGVMRSREF MKDAYSF L E + +Y MF + Sbjct: 121 EINSYKQLPLNLFQIQTKFRDETRPRFGVMRSREFTMKDAYSFHLEDECLEKTYQTMFSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL+ P+ A+SG IGG+ SHEF VLA +GE + S + Sbjct: 181 YCRIFERLGLEYRPVIADSGSIGGNSSHEFHVLAPSGEDAIAFSSE 226 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 113/189 (59%), Gaps = 5/189 (2%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T+D+ N + D P K + RGIEVGHIF G YS M+A+ GK+ + MG Sbjct: 386 TADLRNVQEGDLSPCGKGTLSITRGIEVGHIFQLGKTYSEAMNASVLNQQGKNQTLTMGC 445 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSK 374 YGIG R+VAA IE ++D GIIW +++APF + ++ N+K +V D E+ YA L Sbjct: 446 YGIGISRIVAAAIEQNNDANGIIWNEALAPFSVVIVPMNMKKSHRVA-DLAERYYAELQA 504 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD E+ G FA A+L+G P +I+G + + + +E K+R +G ++D+ +E+V Sbjct: 505 AGIEVLFDDRKERPGVMFADAELIGIPHMLIIGDRSIDNGVIEYKNRKSGEKQDVKIEDV 564 Query: 435 INYASHRFS 443 I + + S Sbjct: 565 IAFIKEQRS 573 >gi|91793895|ref|YP_563546.1| prolyl-tRNA synthetase [Shewanella denitrificans OS217] gi|123060765|sp|Q12L53|SYP_SHEDO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91715897|gb|ABE55823.1| prolyl-tRNA synthetase [Shewanella denitrificans OS217] Length = 571 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 122/224 (54%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YSWLP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSWLPSGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW+E+GR++ +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPLVQPADLWIETGRWEKFGPELLRFQDRHNRDFVLGPTHEEVITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP + YQIQ KFRDE+RPRFGVMR+REFLMKDAYSF L +Y MF + Sbjct: 121 EVSSYKQLPLSLYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHLDQGTMDETYQAMFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R+GL P+ A++G IGG LSHEF VLA++GE + S Sbjct: 181 YNNIFTRMGLAFRPVLADTGSIGGSLSHEFHVLANSGEDLIAYS 224 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 109/186 (58%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N ++ P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PLATAADIRNVVEGEATPDGLGTYAMARGIEVGHIFQLGTNYSKAMNATVLDENGKSQVM 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE +HD +GI+ P+++APF + ++ + H D EK+Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNHDDRGIMLPEALAPFTVGILPMNMHKSHRVADIAEKLYQD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G +V DD E+ G FA +L+G P V++G + + E K+R TG ++D+ L Sbjct: 499 LNDAGIEVLLDDRKERPGVMFADMELIGLPHVVVIGDRNIDAGVFEYKNRRTGEKQDIPL 558 Query: 432 EEVINY 437 ++++++ Sbjct: 559 DQIVDF 564 >gi|146283154|ref|YP_001173307.1| prolyl-tRNA synthetase [Pseudomonas stutzeri A1501] gi|166980144|sp|A4VNB4|SYP_PSEU5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145571359|gb|ABP80465.1| prolyl-tRNA synthetase [Pseudomonas stutzeri A1501] Length = 571 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 164/224 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DA + SH+LMLR GMI + + G+Y+W+P+G +AL AI+REE Sbjct: 1 MRTSQFLLSTLKETPSDAVVISHQLMLRAGMIRKLASGLYTWMPMGLRALRKAEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+D+ GPTHEEV+TD+ R+ Sbjct: 61 MNKAGALEVLMPAIQPAELWQESGRWEQYGPELLRLKDRHDREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REFLMKDAYSF L E + +Y++M + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFHLNQESLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL P++A++G IGG SHEF VLA++GE + S Sbjct: 181 YCNIFTRLGLNFRPVQADTGSIGGTGSHEFHVLAESGEDDIAFS 224 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 73/191 (38%), Positives = 117/191 (61%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M+ G +GK + Sbjct: 378 PLPQVADLRNVVAGDPSPDGKGSLVIKRGIEVGHIFQLGTKYSEAMNCQVMGENGKPATL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE ++D +GI+WPD++APF+I+L+ +K + R+A +K+YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNYDERGILWPDALAPFQIALVPMKYETEAVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + ++D +E KHR + ++ Sbjct: 498 TAAGYEVLLDDRDKKTSPGVKFADMELIGIPHRIVVSDRGLADGMLEYKHRRDAQPQQVA 557 Query: 431 LEEVINYASHR 441 + +++++ + R Sbjct: 558 VSDILSFINSR 568 >gi|254360942|ref|ZP_04977088.1| proline--tRNA ligase [Mannheimia haemolytica PHL213] gi|261492183|ref|ZP_05988753.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494250|ref|ZP_05990749.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153092421|gb|EDN73484.1| proline--tRNA ligase [Mannheimia haemolytica PHL213] gi|261310102|gb|EEY11306.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312163|gb|EEY13296.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 571 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 136/276 (49%), Positives = 178/276 (64%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKEMPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LWVESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWVESGRWNDYGPELLRFKDRGERDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTTQESLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + ++ V + AP A D N K + L EN Sbjct: 237 EAVA----VGERQAPTAEMQLVDTPNAKTINELVEN 268 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 109/182 (59%), Gaps = 4/182 (2%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K RGIEVGHIF G KYS M AT +G DGK + MG Y Sbjct: 383 ADLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 GIG RVVAA IE +D +GIIWP D +APF ++++ + H + + E++YA L Sbjct: 443 GIGVTRVVAAAIEQHYDDRGIIWPCDEMAPFTVAIVPMNMHKSEKVQAFAEELYANLKAQ 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V +DD E+ G FA +L+G P V++G K + + ++E K+R +G ++ ++ E ++ Sbjct: 503 GVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLENGEIEYKNRRSGEKQMIAKESLL 562 Query: 436 NY 437 + Sbjct: 563 AF 564 >gi|238759923|ref|ZP_04621077.1| Prolyl-tRNA synthetase [Yersinia aldovae ATCC 35236] gi|238701830|gb|EEP94393.1| Prolyl-tRNA synthetase [Yersinia aldovae ATCC 35236] Length = 572 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 131/277 (47%), Positives = 176/277 (63%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y +IF R+ L + A++G IGG SHEF VLA++GE + S +F + Sbjct: 181 YSKIFARMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTESDYAANIEFAEALA 240 Query: 233 PSEN----------TDFDDIISLNSIVEQWTAPYAAT 259 PSE D + ++ +VEQ+ P T Sbjct: 241 PSEPRTGATEELRIIDTPNAKTIAELVEQFKLPIEKT 277 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 74/186 (39%), Positives = 111/186 (59%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQVADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE ++D +GIIWPD++APF+++++ + H ++ E++YA Sbjct: 440 TMGCYGIGVSRVVAAAIEQNYDERGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + +VE K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRIGEKQMIKT 559 Query: 432 EEVINY 437 E+I + Sbjct: 560 SEIIEF 565 >gi|170727590|ref|YP_001761616.1| prolyl-tRNA synthetase [Shewanella woodyi ATCC 51908] gi|226701338|sp|B1KNR3|SYP_SHEWM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169812937|gb|ACA87521.1| prolyl-tRNA synthetase [Shewanella woodyi ATCC 51908] Length = 569 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 121/218 (55%), Positives = 159/218 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P DAE+ SH+LMLR GMI +++ G+YSWLP G + L + AI+REE Sbjct: 1 MRVSKYLLSTQKETPADAEVISHQLMLRAGMIRRNASGLYSWLPTGLRVLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G++E+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 61 MNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQDRHNRDFVLGPTHEEVITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E +Y MF + Sbjct: 121 EVNSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDQETMDETYESMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y I RLGL P+ A++G IGG +SHEF VLA++GE Sbjct: 181 YSNILTRLGLAFRPVIADTGSIGGSMSHEFHVLANSGE 218 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 98/159 (61%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+A +GK + MG YG+G R+VAA IE +HD +GII Sbjct: 406 RGIEVGHIFQLGKNYSEAMNANVLDQNGKAQTLLMGCYGVGVSRMVAAAIEQNHDDRGII 465 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF++ ++ + H +D E++Y LS G +V +DD E+ G FA +L+ Sbjct: 466 WPDAIAPFRVGILPMNMHKSHRVQDMAEQLYKDLSDAGIEVLFDDRKERAGVMFADMELI 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P V++G + + E K+R TG ++++ ++++ + Sbjct: 526 GLPHVVVIGDRNIDAGVFEYKNRRTGEKQEVPFDQIVEF 564 >gi|146329716|ref|YP_001210021.1| prolyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] gi|166980118|sp|A5EXK9|SYP_DICNV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146233186|gb|ABQ14164.1| prolyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] Length = 572 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 126/221 (57%), Positives = 162/221 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+++L +E+P +AE+ SH+LMLR GMI Q + GIYSWLPLG + L+ V+AIIREE Sbjct: 1 MRLSQFWLVTKKESPAEAEVISHQLMLRAGMIRQTAVGIYSWLPLGLRVLNKVSAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P Q A+LW ESGR+ +YG E+ R DR+ + GPTHEEV+TD+ R Sbjct: 61 MDRAGALEVVMPAAQPAELWQESGRWHAYGPELQRFIDRHQRDYCIGPTHEEVVTDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REF+MKD YSFDL G K+SY KM+ + Sbjct: 121 DLSSYKQLPVNLYQIQTKFRDEIRPRFGVMRGREFVMKDGYSFDLDVAGMKNSYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF RLGL P+ A++G IGG SHEF VLA+TGE + Sbjct: 181 YCRIFDRLGLNYRPVIADNGAIGGTGSHEFHVLAETGEDSI 221 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/180 (38%), Positives = 99/180 (55%), Gaps = 3/180 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T+D+ N D P+ + + RGIEVGH+F G KYS M+ T DG MG Sbjct: 384 TADIRNVVEGDPSPDGQGTLLIRRGIEVGHVFQLGEKYSKAMNLTVPLEDGTLCTPLMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG RV+AA IE +HD GIIW +APF ++++ I A + RDA E +Y + + Sbjct: 444 YGIGVTRVIAAAIEQNHDENGIIWSKELAPFSVAILPINADKSEAVRDAAEALYQKFLQA 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD + G FA DL+G P ++++ K ++ VE K R +SLEE++ Sbjct: 504 GVDVVLDDRNRRAGVMFADIDLIGIPARIVISDKTLATGSVEFKRRNEQETFHISLEEIV 563 >gi|145598925|ref|YP_001163001.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|166980173|sp|A4TL66|SYP_YERPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145210621|gb|ABP40028.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides F] Length = 572 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 130/277 (46%), Positives = 176/277 (63%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y +IF R+ L + A++G IGG SHEF VLA++GE + S +F + Sbjct: 181 YSKIFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAANIEFAEALA 240 Query: 233 PSEN----------TDFDDIISLNSIVEQWTAPYAAT 259 P+E D + ++ +VEQ+ P T Sbjct: 241 PTEPRAPATEELRIVDTPNAKTIAELVEQFKLPIEKT 277 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 67/159 (42%), Positives = 101/159 (63%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M AT +G DG++ + MG YGIG RVVAA IE +HD +GII Sbjct: 407 RGIEVGHIFQLGTKYSEVMKATVQGEDGRNQVMTMGCYGIGVSRVVAAAIEQNHDDRGII 466 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H ++ E++Y L G DV DD E+ G FA +L+ Sbjct: 467 WPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSHGIDVILDDRKERPGVMFADMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P +++G + + +VE K+R G ++ + E++ + Sbjct: 527 GVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIVEF 565 >gi|153947724|ref|YP_001400022.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|170023340|ref|YP_001719845.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] gi|166980172|sp|A7FFJ4|SYP_YERP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701362|sp|B1JQI5|SYP_YERPY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152959219|gb|ABS46680.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|169749874|gb|ACA67392.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] Length = 572 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 130/277 (46%), Positives = 176/277 (63%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y +IF R+ L + A++G IGG SHEF VLA++GE + S +F + Sbjct: 181 YSKIFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAANIEFAEALA 240 Query: 233 PSEN----------TDFDDIISLNSIVEQWTAPYAAT 259 P+E D + ++ +VEQ+ P T Sbjct: 241 PTEPRAPATEELRIVDTPNAKTIAELVEQFKLPIEKT 277 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 67/159 (42%), Positives = 101/159 (63%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M AT +G DG++ + MG YGIG RVVAA IE +HD +GII Sbjct: 407 RGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVMTMGCYGIGVSRVVAAAIEQNHDDRGII 466 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H ++ E++Y L G DV DD E+ G FA +L+ Sbjct: 467 WPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSHGIDVILDDRKERPGVMFADMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P +++G + + +VE K+R G ++ + E++ + Sbjct: 527 GVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIVEF 565 >gi|74318130|ref|YP_315870.1| prolyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] gi|74057625|gb|AAZ98065.1| prolyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] Length = 579 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 164/224 (73%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++FL +E P +AE+ SHKLMLR G+I + G+Y+W+PLG + L V A++REE Sbjct: 4 MRTTQFFLSTTKEAPSEAELVSHKLMLRAGLIKRLGSGLYTWMPLGLRVLRRVEAVVREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW E+GR+ +G +ML++ DR+++ +GPTHEEV+TD+ R Sbjct: 64 MNRAGAIELLMPAVQPAELWQETGRWAQFGPQMLKIKDRHEREFCFGPTHEEVITDLARR 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + E +Y M+ + Sbjct: 124 EIKSYRQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHASRESLAATYQAMYDA 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF RLGL+ + A++G IGG SHEF VLAD+GE + +C Sbjct: 184 YGRIFTRLGLRFRAVAADTGAIGGSASHEFHVLADSGEDLIAYC 227 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 100/166 (60%), Gaps = 3/166 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K A RGIEVGH+F G KYS M+AT+ GK ++MG Sbjct: 386 VADIRNVVAGDPSPDGKGTLALCRGIEVGHVFQLGNKYSQAMNATYLDEAGKAQAMEMGC 445 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+VAA +E +HDGKGI+WP S+APF + ++ I ++A + +YA L V Sbjct: 446 YGIGVSRIVAAAVEQNHDGKGIVWPASMAPFSVVIVAIGYGKSASVKNAADTLYADLMAV 505 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +V DD E+ G FA A+L+G P +V +G + +++ VE + R Sbjct: 506 GVEVLLDDRDERPGVMFADAELVGIPHRVTLGERGLNEGVVEYQPR 551 >gi|22126985|ref|NP_670408.1| prolyl-tRNA synthetase [Yersinia pestis KIM 10] gi|45442549|ref|NP_994088.1| prolyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|108806542|ref|YP_650458.1| prolyl-tRNA synthetase [Yersinia pestis Antiqua] gi|108813091|ref|YP_648858.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516] gi|149366930|ref|ZP_01888963.1| prolyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|162418775|ref|YP_001607747.1| prolyl-tRNA synthetase [Yersinia pestis Angola] gi|165927072|ref|ZP_02222904.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939831|ref|ZP_02228371.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|166011913|ref|ZP_02232811.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166211331|ref|ZP_02237366.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167400131|ref|ZP_02305649.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419446|ref|ZP_02311199.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425324|ref|ZP_02317077.1| prolyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470133|ref|ZP_02334837.1| prolyl-tRNA synthetase [Yersinia pestis FV-1] gi|218928237|ref|YP_002346112.1| prolyl-tRNA synthetase [Yersinia pestis CO92] gi|229837776|ref|ZP_04457936.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|229840998|ref|ZP_04461157.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843099|ref|ZP_04463249.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229903534|ref|ZP_04518647.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516] gi|270487315|ref|ZP_06204389.1| proline--tRNA ligase [Yersinia pestis KIM D27] gi|294503084|ref|YP_003567146.1| prolyl-tRNA synthetase [Yersinia pestis Z176003] gi|116256081|sp|Q7CH25|SYP_YERPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|123246276|sp|Q1CFH2|SYP_YERPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|123372686|sp|Q1CAK9|SYP_YERPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701361|sp|A9R371|SYP_YERPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|21960030|gb|AAM86659.1|AE013912_3 proline tRNA synthetase [Yersinia pestis KIM 10] gi|45437414|gb|AAS62965.1| prolyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|108776739|gb|ABG19258.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516] gi|108778455|gb|ABG12513.1| prolyl-tRNA synthetase [Yersinia pestis Antiqua] gi|115346848|emb|CAL19734.1| prolyl-tRNA synthetase [Yersinia pestis CO92] gi|149290544|gb|EDM40620.1| prolyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|162351590|gb|ABX85538.1| prolyl-tRNA synthetase [Yersinia pestis Angola] gi|165912234|gb|EDR30871.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|165920968|gb|EDR38192.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989179|gb|EDR41480.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166207102|gb|EDR51582.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|166962187|gb|EDR58208.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050839|gb|EDR62247.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055724|gb|EDR65508.1| prolyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679304|gb|EEO75407.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516] gi|229689975|gb|EEO82034.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229697364|gb|EEO87411.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704153|gb|EEO91165.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|262361122|gb|ACY57843.1| prolyl-tRNA synthetase [Yersinia pestis D106004] gi|262365363|gb|ACY61920.1| prolyl-tRNA synthetase [Yersinia pestis D182038] gi|270335819|gb|EFA46596.1| proline--tRNA ligase [Yersinia pestis KIM D27] gi|294353543|gb|ADE63884.1| prolyl-tRNA synthetase [Yersinia pestis Z176003] gi|320014203|gb|ADV97774.1| prolyl-tRNA synthetase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 572 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 130/277 (46%), Positives = 176/277 (63%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y +IF R+ L + A++G IGG SHEF VLA++GE + S +F + Sbjct: 181 YSKIFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAANIEFAEALA 240 Query: 233 PSEN----------TDFDDIISLNSIVEQWTAPYAAT 259 P+E D + ++ +VEQ+ P T Sbjct: 241 PTEPRAPATEELRIVDTPNAKTIAELVEQFKLPIEKT 277 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 67/159 (42%), Positives = 101/159 (63%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M AT +G DG++ + MG YGIG RVVAA IE +HD +GII Sbjct: 407 RGIEVGHIFQLGTKYSEVMKATVQGEDGRNQVMTMGCYGIGVSRVVAAAIEQNHDDRGII 466 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H ++ E++Y L G DV DD E+ G FA +L+ Sbjct: 467 WPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSHGIDVILDDRKERPGVMFADMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P +++G + + +VE K+R G ++ + E++ + Sbjct: 527 GVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIVEF 565 >gi|212710377|ref|ZP_03318505.1| hypothetical protein PROVALCAL_01437 [Providencia alcalifaciens DSM 30120] gi|212686959|gb|EEB46487.1| hypothetical protein PROVALCAL_01437 [Providencia alcalifaciens DSM 30120] Length = 572 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 140/303 (46%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y WLP G + L V I+REE Sbjct: 1 MRTSKYLLSTLKETPADAEVISHKLMLRAGMIRKLASGLYDWLPTGVRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MENAGAIEVSLPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 EITSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+G + A++G IGG+ SHEF VLA +GE V S + DF + N +F Sbjct: 181 YSKIFTRIGFDFRAVHADTGSIGGNASHEFQVLAQSGEDDVVFSTE-SDF---AANIEFA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++ N Q AP + ++H L D+ N + A +E +++LP+ Sbjct: 237 EAVAPNV---QRAAP---SQEMH---LVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 104/165 (63%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M A+ + +G + V MG YGIG R+VAA IE SHD +GII Sbjct: 407 RGIEVGHIFQLGTKYSEAMKASVQNEEGHNQIVTMGCYGIGVTRIVAAAIEQSHDDRGII 466 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF ++++ + H ++ EK+YA L G DV +DD E+ G FA +L+ Sbjct: 467 WPDAIAPFHVAILPMNMHKSYRVKEVAEKLYADLKAQGIDVIFDDRKERPGVMFADMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + ++VE K R + ++ + L+ V+++ + + Sbjct: 527 GVPYTIVIGDRNLDTNQVEYKSRRSDDKQLVGLDNVVSFLKEKLA 571 >gi|114152274|sp|Q3SH24|SYP_THIDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 576 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 164/224 (73%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++FL +E P +AE+ SHKLMLR G+I + G+Y+W+PLG + L V A++REE Sbjct: 1 MRTTQFFLSTTKEAPSEAELVSHKLMLRAGLIKRLGSGLYTWMPLGLRVLRRVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW E+GR+ +G +ML++ DR+++ +GPTHEEV+TD+ R Sbjct: 61 MNRAGAIELLMPAVQPAELWQETGRWAQFGPQMLKIKDRHEREFCFGPTHEEVITDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + E +Y M+ + Sbjct: 121 EIKSYRQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHASRESLAATYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF RLGL+ + A++G IGG SHEF VLAD+GE + +C Sbjct: 181 YGRIFTRLGLRFRAVAADTGAIGGSASHEFHVLADSGEDLIAYC 224 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 100/166 (60%), Gaps = 3/166 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K A RGIEVGH+F G KYS M+AT+ GK ++MG Sbjct: 383 VADIRNVVAGDPSPDGKGTLALCRGIEVGHVFQLGNKYSQAMNATYLDEAGKAQAMEMGC 442 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+VAA +E +HDGKGI+WP S+APF + ++ I ++A + +YA L V Sbjct: 443 YGIGVSRIVAAAVEQNHDGKGIVWPASMAPFSVVIVAIGYGKSASVKNAADTLYADLMAV 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +V DD E+ G FA A+L+G P +V +G + +++ VE + R Sbjct: 503 GVEVLLDDRDERPGVMFADAELVGIPHRVTLGERGLNEGVVEYQPR 548 >gi|50751644|ref|XP_422493.1| PREDICTED: similar to Prolyl-tRNA synthetase (mitochondrial)(putative) [Gallus gallus] Length = 470 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 161/428 (37%), Positives = 230/428 (53%), Gaps = 37/428 (8%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 SH+LML+ G+IH S G Y LP ++++ + +I G ++++P+L SA+LW Sbjct: 65 SHRLMLQGGLIHPASPGCYHLLPPAVRSMEKLIRLIDGAMRNIGGQKVNMPSLSSAELWR 124 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPFTFYQIQLKFR 140 SGR++ G E+ RLADR+ K GPTHEE +T++ +H SYR LP YQ+ KFR Sbjct: 125 TSGRWEQMGPELFRLADRHGKEYCLGPTHEEAVTELVAAHSNLSYRQLPLRLYQVTRKFR 184 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 DE +PRFG++RSREF MKD Y+FD + E ++H+Y + +Y +F RLGL+ + +RA +G Sbjct: 185 DEPKPRFGLLRSREFYMKDMYTFDASEEAARHTYELVCTAYRSLFKRLGLRCVQVRAATG 244 Query: 201 PIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 IGG SHEF + AD GE + V C + N + D E+ TA A Sbjct: 245 TIGGTASHEFQLPADIGEDRLVLCPAGHF-----AANVEMVD--------EEQTACPAC- 290 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 EKL S RGIEVGH FY GTKYS +A F + K +MG YG+ Sbjct: 291 ----GEKLTQS---------RGIEVGHTFYLGTKYSSVHNAAFYTPENKLQLAEMGCYGL 337 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC--EKIY----ARLS 373 G R++AA IE I WP +AP+++ I K + R A E +Y L Sbjct: 338 GVTRILAASIEVLSTEDSIRWPSLIAPYQVCFIPPKKGSREERGAALLEHLYDDVAEALP 397 Query: 374 KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV-EIKHRLTGIREDMSL 431 ++ DV DD + IG + A+ LG+P V+ G + D V E+ + +G ++ Sbjct: 398 RLAGDVVLDDRTQMTIGKRLKDANKLGYPYVVVAGRRVCEDPPVFEVWDQSSGTVLYLTK 457 Query: 432 EEVINYAS 439 E VI S Sbjct: 458 EGVIELLS 465 >gi|91774775|ref|YP_544531.1| prolyl-tRNA synthetase [Methylobacillus flagellatus KT] gi|123254834|sp|Q1H497|SYP_METFK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91708762|gb|ABE48690.1| prolyl-tRNA synthetase [Methylobacillus flagellatus KT] Length = 573 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 167/224 (74%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P++AE+ASHKLMLR G+I + G+YSW+PLG + L V I+REE Sbjct: 1 MRASQFFLATQKEAPQEAELASHKLMLRAGLIKRLGSGLYSWMPLGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q +LW E+GR+ +G +ML++ DR+++ +GPTHEEV+TDI R Sbjct: 61 MNRAGALELLMPAVQPKELWEETGRWAVFGPQMLKIRDRHERDFCFGPTHEEVITDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKD YSF + E + +Y+ M+ + Sbjct: 121 EIRSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFVMKDGYSFHTSLESLQQTYDTMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y IF+RLGLK +RA++G IGGD SHEF VLAD+GE + +C Sbjct: 181 YSNIFNRLGLKFRAVRADTGAIGGDGSHEFHVLADSGEDALAYC 224 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 106/181 (58%), Gaps = 3/181 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF TKY+ M AT+ +G+ +++MG Sbjct: 387 VADIRNVVEGDPSPDGKGCISLCRGIEVGHIFQLRTKYTEAMEATYLDENGQKQFMEMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +D +GII+P ++APF +++ I + + A +Y LS + Sbjct: 447 YGIGVSRIVGAAIEQGNDERGIIFPAAMAPFSVAIAPIGYDKSEAVQSAAHALYDELSAL 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G FA +L+G P ++++G + + + +VE + R E ++L +++ Sbjct: 507 GIDVLLDDRGERPGVMFADLELIGIPHRIVIGDRGLKEGQVEYQARTAASAETVALADIV 566 Query: 436 N 436 + Sbjct: 567 S 567 >gi|188533062|ref|YP_001906859.1| prolyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] gi|226701287|sp|B2VDZ9|SYP_ERWT9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|188028104|emb|CAO95961.1| Prolyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] Length = 572 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 131/303 (43%), Positives = 188/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LRL DR+D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQGSLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y + F R+GL ++A++G IGG SHEF VLA +GE + S +D+ Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDIVFST----------GSDY- 229 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + N + + P +D E++ + PE K ++ +++LP+ Sbjct: 230 ---AANIEMAEALPPAGGRADATQERVQFATPEAKTIAD----------LVEQFTLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 Q P +D+ N D+ P+ K + RGIEVGHIF GTKYS M A+ +G DG+ Sbjct: 376 QRDLPLPRIADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKASVQGEDGR 435 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEK 367 + + MG YGIG R+VAA IE +HD +GIIW ++APF+++++ + ++ E Sbjct: 436 NQTLTMGCYGIGITRIVAAAIEQNHDERGIIWSPALAPFQVAILPMNMQKSFRVKELAEA 495 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +L G DV DD E+ G FA +L+G P +++G + + + ++E K R G + Sbjct: 496 LYQQLRAKGIDVILDDRKERPGVMFADMELIGVPHTIVIGERNLDNDEIEYKARRGGEKR 555 Query: 428 DMSLEEVINY 437 + +E++++ Sbjct: 556 LIKTDEIVDF 565 >gi|77918296|ref|YP_356111.1| prolyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] gi|114152225|sp|Q3A6R6|SYP_PELCD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|77544379|gb|ABA87941.1| prolyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] Length = 571 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 120/221 (54%), Positives = 161/221 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + Y LP L+E P DAE+ SHKLMLR GMI + + GIY++LP G +++ V I+REE Sbjct: 1 MRYTDYLLPTLKETPSDAEVISHKLMLRAGMIRKLAAGIYNYLPFGLRSIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P + ++LW ESGR++ YGKE+LR DR D + GPTHEEV+TD+ R+ Sbjct: 61 MDRAGAMELLMPMVVPSELWEESGRWEHYGKELLRFTDRKDASFCLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ +Y KM+ + Sbjct: 121 TVRSYRQLPLNLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDIDEAGADVAYEKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R GLK + A++G IGG SHEF+VLA +GE + Sbjct: 181 YRRIFERCGLKFRAVEADTGNIGGSSSHEFMVLAASGEDAI 221 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/154 (42%), Positives = 93/154 (60%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F GTKYS + AT G+D + MG YGIG R VAA IE +HD GI+ Sbjct: 403 RGIEVGHVFKLGTKYSAALGATVLDDQGQDRELFMGCYGIGVGRTVAAAIEQNHDENGIV 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +APF + + + + A E +YA L +G +V DD E+ GS+F ADL+G Sbjct: 463 FPMPIAPFHVLVTVVNPRQEEVLAAAENLYAELQALGVEVLLDDRDERPGSKFKDADLIG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 PL++ VG++ + ++ VE++ R G R + L E Sbjct: 523 IPLRLTVGARGLKENAVELQERAGGERRMLPLAE 556 >gi|323144099|ref|ZP_08078739.1| proline--tRNA ligase [Succinatimonas hippei YIT 12066] gi|322416114|gb|EFY06808.1| proline--tRNA ligase [Succinatimonas hippei YIT 12066] Length = 593 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 131/226 (57%), Positives = 155/226 (68%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+ENP +A + SH+LMLR G+I Q + GIY WLP G + L V IIREE Sbjct: 22 MRTSKYLLSTLKENPVEAAVVSHRLMLRAGLIRQIASGIYVWLPTGMRVLQKVEKIIREE 81 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q ADLW ESGRY+ YG E+ RL DR + GPTHEEV+T I R Sbjct: 82 LNRAGAIELFMPFVQPADLWKESGRYEKYGPELCRLKDRKKNEFVLGPTHEEVITAIARR 141 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKS R LP YQIQ KFRDE+RPRFGVMR REF+MKDAYSF + + +Y M+ + Sbjct: 142 EIKSARQLPINLYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFHIDHASLEKTYKDMYDA 201 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 Y RIF RLGL P+ A++G IGG SHEF VLAD GE T VF K Sbjct: 202 YSRIFTRLGLDFRPVEADNGSIGGSSSHEFQVLADAGEDTIVFSDK 247 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 74/164 (45%), Positives = 108/164 (65%), Gaps = 1/164 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVG +F GTKYS M AT G DGK +QMG YGIG RV+AA IE HD KGII Sbjct: 430 KGIEVGQVFMLGTKYSESMGATVLGEDGKPINMQMGCYGIGVTRVIAAAIEQHHDDKGII 489 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPDS+APF+++++ IK + Q R+A EK+YA L G +V +DD E+ G FA +L+ Sbjct: 490 WPDSMAPFQVAIVAIKPNKSQAVREAAEKLYAELEAKGVEVLYDDRDERPGVMFADMELI 549 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P + +G + ++ VE K R TG +E++S+++++++ + Sbjct: 550 GIPHVITIGDRGLAAGSVEYKSRKTGQKEEVSVDKILDFVCAKL 593 >gi|152977868|ref|YP_001343497.1| prolyl-tRNA synthetase [Actinobacillus succinogenes 130Z] gi|171472919|sp|A6VKR5|SYP_ACTSZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150839591|gb|ABR73562.1| prolyl-tRNA synthetase [Actinobacillus succinogenes 130Z] Length = 571 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRSMASGLYNWLPTGVKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +QSA+LW ESGR++ YG E+LR +DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQSAELWQESGRWEQYGPELLRFSDRGNRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTTQESLQQTYEVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YTNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE 226 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 73/181 (40%), Positives = 106/181 (58%), Gaps = 4/181 (2%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K RGIEVGHIF G KYS M+AT +G DGK + MG YG Sbjct: 384 DLRNVAEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMNATVQGEDGKPLVMTMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVG 376 IG RVVAA IE HD +GIIWP D +APF ++++ + H + R E++Y L G Sbjct: 444 IGVTRVVAAAIEQHHDERGIIWPTDEIAPFTVAIVPMNMHKSESVRAFAEELYQTLKAQG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV +DD E+ G FA +L+G P V++G K + ++E K+R G ++ ++ + ++ Sbjct: 504 VDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLDKGEIEYKNRRNGEKQMIAKDRLLA 563 Query: 437 Y 437 + Sbjct: 564 F 564 >gi|238021436|ref|ZP_04601862.1| hypothetical protein GCWU000324_01336 [Kingella oralis ATCC 51147] gi|237868416|gb|EEP69422.1| hypothetical protein GCWU000324_01336 [Kingella oralis ATCC 51147] Length = 611 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 131/264 (49%), Positives = 175/264 (66%), Gaps = 7/264 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLMLR G+I ++ G+Y+W+P+G + L V AI+REE Sbjct: 45 MKASQFFISTLKEAPAEAVLASHKLMLRAGLIKANASGLYTWMPMGLRVLRKVEAIVREE 104 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q ADLW ESGR+D YG E+LR+ DR+D A + PT EE++TDI R Sbjct: 105 MNRAGAIELLMPVVQPADLWKESGRWDFYGDELLRITDRHDNAFCFSPTCEELITDIVRK 164 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE RPRFGVMR+REF+MKDAYSF E K +Y M+ + Sbjct: 165 EINSYKQLPKNFYHIQTKFRDERRPRFGVMRAREFVMKDAYSFHADFESLKATYQTMYDA 224 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF+RLGL P+ A++G IGG SHEF VLAD+GE V D D+ + N + Sbjct: 225 YCRIFNRLGLDYRPVAADTGSIGGTGSHEFQVLADSGE-DVIAYSDASDY---AANVELA 280 Query: 241 DIISLNSIVEQWTAPYAATSDVHN 264 + L+ P A + +H Sbjct: 281 QTLPLSGC---RVVPAQALAKIHT 301 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 99/159 (62%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KYS ++A+F ++GK ++MG YGIG R+VAA IE ++D +GI Sbjct: 448 ARGIEVGHVFQLRDKYSAALNASFLDSNGKSQIMEMGCYGIGITRIVAAAIEQNNDERGI 507 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW +++APF + ++ N K + V R+A ++IYA L G DV DD E+ G ++ Sbjct: 508 IWTEAMAPFSVVIVPMNYKKSNSV-REAADQIYADLQAAGVDVLLDDRDERAGVLLNDSE 566 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R +G + L E++ Sbjct: 567 LLGIPHRIVIGDRALKEGNVEYAERRSGESISVPLNEIV 605 >gi|226945724|ref|YP_002800797.1| prolyl-tRNA synthetase [Azotobacter vinelandii DJ] gi|259511575|sp|C1DRG4|SYP_AZOVD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226720651|gb|ACO79822.1| prolyl-tRNA synthetase [Azotobacter vinelandii DJ] Length = 571 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 133/278 (47%), Positives = 181/278 (65%), Gaps = 20/278 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DA + SH+LMLR GMI + + G+Y+WLPLG +AL AI+REE Sbjct: 1 MRTSQYLLSTLKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPLGLRALRKAEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E+ +P +Q A+LW ESGR++ YG E+LR+ DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MDKAGALEVLMPAIQPAELWQESGRWEQYGPELLRIRDRHAREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REFLMKDAYSF LT E + +Y++M + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFHLTQESLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF--------PI 232 Y IF RLGL+ P++A++G IGG SHEF VLA +GE + S D D+ I Sbjct: 181 YCNIFSRLGLEFRPVQADTGSIGGTGSHEFHVLAASGEDDIAFS-DSSDYAANIEKAEAI 239 Query: 233 PSENT-----------DFDDIISLNSIVEQWTAPYAAT 259 P E D D +++ +V Q+ P T Sbjct: 240 PREKARAAASEELRLVDTPDARTIDELVRQFGLPVEKT 277 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 110/192 (57%), Gaps = 4/192 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + V RGIEVGHIF GTKYS M+ G +GK + Sbjct: 378 PLPQVADLRNVVEGDPSPDGQGSLVIKRGIEVGHIFQLGTKYSEAMNCKVLGENGKPVTL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE ++D +GI+WP ++APF+I+L+ +K R+A +++YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNYDERGILWPQALAPFQIALVPMKYESAAVREATDRLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 G +V DD ++ G +FA +L+G P +++V + +++ +E K R + + Sbjct: 498 VAAGYEVLLDDRDKKTSPGVKFADMELIGIPHRIVVSERGLAEGTLEYKGRRETEVQAIP 557 Query: 431 LEEVINYASHRF 442 ++I + +R Sbjct: 558 AADLITFLGNRI 569 >gi|290473678|ref|YP_003466550.1| proline tRNA synthetase [Xenorhabdus bovienii SS-2004] gi|289172983|emb|CBJ79754.1| proline tRNA synthetase [Xenorhabdus bovienii SS-2004] Length = 573 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 121/226 (53%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SHKLMLR GM + + G+Y+W+P G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVVSHKLMLRAGMTRKLASGLYNWMPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFEDRGARPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+KM+ + Sbjct: 121 EVTSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+GL + A++G IGG SHEF VLAD+GE + S + Sbjct: 181 YSKIFTRIGLDFRAVLADTGSIGGSASHEFQVLADSGEDDIAFSTE 226 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 76/186 (40%), Positives = 114/186 (61%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ + + RGIEVGHIF GTKYS + AT + DG + V Sbjct: 380 PLPEIADIRNVLEGDASPDGQGTLLIKRGIEVGHIFQLGTKYSDALKATVQNEDGHNQVV 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIWPD++APF+++L+ + H ++ EK+YA Sbjct: 440 SMGCYGIGVTRIVAAAIEQNHDDRGIIWPDAIAPFQVALLPMNMHKSYRVKEVAEKLYAD 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV +DD E+ G FA +L+G P +++G + + + +VE K+R G ++ + L Sbjct: 500 LRANGIDVIFDDRKERPGVMFADMELIGVPHTLVIGDRNLDNGEVEYKYRRNGDKQMLKL 559 Query: 432 EEVINY 437 E +I Y Sbjct: 560 EGIIEY 565 >gi|90020556|ref|YP_526383.1| Pectate lyase/Amb allergen [Saccharophagus degradans 2-40] gi|114152247|sp|Q21MA8|SYP_SACD2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|89950156|gb|ABD80171.1| prolyl-tRNA synthetase [Saccharophagus degradans 2-40] Length = 575 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 122/226 (53%), Positives = 163/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY + +E P DAE+ SH+LMLR G+I + + G+Y+WLP G + L V I+REE Sbjct: 1 MRASKYLIATYKETPADAEVISHQLMLRAGLIRKLASGLYNWLPAGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q A+LW ESGR+ YG E+LR+ DR+D+A GPTHEEV+TD+ R+ Sbjct: 61 MDRAGAQEVLMPVVQPAELWEESGRWQQYGPELLRINDRHDRAFCLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + E + +Y+ M + Sbjct: 121 ELKSYKQLPANFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHASQECLQETYDIMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+GL P+ A++G IGG SHEF VLAD+GE + S + Sbjct: 181 YCKIFDRIGLDYRPVLADTGSIGGTGSHEFHVLADSGEDDIAFSTE 226 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/191 (36%), Positives = 116/191 (60%), Gaps = 6/191 (3%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N + D P K RGIEVGHIF GTKYS M A+ +GKD + MG YG Sbjct: 386 DIRNVVIGDPSPCGKGTIDIKRGIEVGHIFQLGTKYSEAMKASVLDENGKDKTMIMGCYG 445 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVG 376 IG R+VA+ IE ++D GIIWPD++APF +++ IN++ + V + CE++YA+L+++G Sbjct: 446 IGVSRIVASAIEQNYDDNGIIWPDAIAPFHVAIVPINMQKSEAVAQK-CEELYAQLNQLG 504 Query: 377 CDVFW-DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DV D+ ++G A +L+G P +++VG + + ++E K R +D++++++I Sbjct: 505 YDVLLMDEPKARLGGMLADTELMGIPHRIVVGDRGLEKGQLEYKCRRDSDSQDIAVDDII 564 Query: 436 NYASHRFSNNR 446 + ++ + Sbjct: 565 EFINNAVKTGK 575 >gi|304396668|ref|ZP_07378549.1| prolyl-tRNA synthetase [Pantoea sp. aB] gi|304356177|gb|EFM20543.1| prolyl-tRNA synthetase [Pantoea sp. aB] Length = 572 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 162/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTQKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q ADLW ESGR++ YG E+LR+ADR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAVEILMPVVQPADLWQESGRWEEYGPELLRIADRHERPFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQASLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D Sbjct: 181 YSQIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSTD 226 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 112/186 (60%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A+ +D+ N D P+ K RGIEVGHIF GTKYS + A+ +G DG++ + Sbjct: 380 PLASVADIRNVVEGDLSPDGKGTLQIKRGIEVGHIFQLGTKYSDALKASVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWP ++APF+++++ + ++ E++YA Sbjct: 440 SMGCYGIGITRVVAAAIEQNHDDRGIIWPAALAPFEVAILPMNMQKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD E+ G FA +L+G P +++G + + + ++E K R G ++ + Sbjct: 500 LRAKGVEVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDNQEIEYKSRRAGEKQMIKQ 559 Query: 432 EEVINY 437 +E++ + Sbjct: 560 DEIVEF 565 >gi|34496029|ref|NP_900244.1| prolyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] gi|81834766|sp|Q7P0J3|SYP_CHRVO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|34101883|gb|AAQ58250.1| prolyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] Length = 568 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 160/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DA+I S KLM+R G I + + GIYSW+P+G + + V IIREE Sbjct: 1 MRASQFFISTLKEAPADADITSQKLMIRAGFIRKQAAGIYSWMPMGLRVVRKVETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G IE+S+P +Q A+LW E+GR+D+ G E+LR DR+++ PT EEV+TDI R Sbjct: 61 MNRAGGIEVSLPVVQPAELWQETGRWDAMGAELLRFKDRHERDFALQPTAEEVITDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP FYQIQ KFRDE RPRFGVMR REF MKDAYSFD + E + SY+ M+ + Sbjct: 121 ELRSYRALPKNFYQIQTKFRDERRPRFGVMRGREFTMKDAYSFDRSAEDAGKSYDNMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF RLGL + A++G IGGD SHEF V+ADTGE V+C Sbjct: 181 YRRIFDRLGLTYRAVAADTGAIGGDRSHEFQVIADTGEDAIVYC 224 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 77/183 (42%), Positives = 110/183 (60%), Gaps = 7/183 (3%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ + A RGIEVGH+FY GTKYS M+ATF DGK +MG YG Sbjct: 383 DIRNVVEGDPSPDGQGALAIQRGIEVGHVFYLGTKYSAAMNATFLDEDGKPKPFEMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGC 377 IG R++ A IE ++D KG+IWPDS+APF + + + + ++A +K+YA L G Sbjct: 443 IGVTRILGAAIEQNYDDKGMIWPDSIAPFAVVVCPVGYDRSEAVKEAADKLYADLQARGV 502 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR----LTGIREDMSLEE 433 DV DD GE+ G+ FA +L+G P +V +G + + + KVE +HR T + D LE Sbjct: 503 DVMLDDRGERPGAMFADWELIGAPHRVTIGDRGLKEGKVEYQHRRDSEATAVAADAILEH 562 Query: 434 VIN 436 V++ Sbjct: 563 VLS 565 >gi|317047006|ref|YP_004114654.1| prolyl-tRNA synthetase [Pantoea sp. At-9b] gi|316948623|gb|ADU68098.1| prolyl-tRNA synthetase [Pantoea sp. At-9b] Length = 572 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 163/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR+ DR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWEESGRWEQYGPELLRIKDRHERPFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSSE 226 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/243 (32%), Positives = 126/243 (51%), Gaps = 21/243 (8%) Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW--TAPYA 257 GP+G L+ I +T FC+ N D +N W P Sbjct: 339 GPVG--LTMPVIADRTVAKTSDFCA---------GANIDGKHYAGIN-----WGRDLPEP 382 Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ N D P+ K + RGIEVGHIF GTKYS + A +G DG++ + MG Sbjct: 383 RVEDIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSDALKAAVQGEDGRNQIMTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE +HD +GIIWP ++APF+++++ + H ++ +++Y L Sbjct: 443 CYGIGITRVVAAAIEQNHDERGIIWPAALAPFEVAILPMNMHKSFRVKEVADELYNALRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD E+ G FA +L+G P +++G + + ++++E K R +E + E+ Sbjct: 503 KGIDVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDNAEIEYKARSASEKEMIKHSEI 562 Query: 435 INY 437 +++ Sbjct: 563 VDF 565 >gi|45387545|ref|NP_991118.1| probable prolyl-tRNA synthetase, mitochondrial [Danio rerio] gi|41350986|gb|AAH65673.1| Prolyl-tRNA synthetase (mitochondrial) [Danio rerio] Length = 477 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 147/405 (36%), Positives = 220/405 (54%), Gaps = 33/405 (8%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D S +LM++TG+IH + G + +LP+ ++L+ + +I EE + G ++ +P L S Sbjct: 66 DLTCRSQRLMVQTGLIHPSNPGCFYYLPVALRSLEKLVRLIDEEMHAIGGQKVDMPALCS 125 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPFTFYQI 135 A+LW +SGR++ GKEM RL DR++ GPTHEE +T++F S SY+ LP YQ+ Sbjct: 126 AELWKKSGRWELMGKEMFRLLDRHNGEYCLGPTHEEAVTELFASQTTMSYKKLPLLLYQV 185 Query: 136 QLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 KFRDE +P+FG++R REF MKD YSFD+ E + H+YN + +Y RI RL LK + + Sbjct: 186 TRKFRDEQKPKFGLLRGREFYMKDMYSFDINEEAALHTYNSVCQAYRRILDRLHLKWVQV 245 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 +A++G IGG LSHEF + AD GE ++ + ++ +E Sbjct: 246 QADTGNIGGTLSHEFQLPADIGEDKLLVCGN----------------CGFSANIETMEPG 289 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A S KL +S RGIEVGH FY GTKYS A F A +MG Sbjct: 290 QAKCSQCQTGKLTES---------RGIEVGHTFYLGTKYSQAFKALFVNASNVPAVAEMG 340 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI----NIKAHD--QVCRDACEKIY 369 +G+G R++AA IE I WP +AP+++ ++ KAH+ Q + + + Sbjct: 341 CFGLGVTRILAASIEVMSTEDAIHWPGLIAPYQVCVLPPKKGSKAHEATQKAEELAQSLG 400 Query: 370 ARLSKVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKFVSD 413 L + +V DD + IG + A +LG+P V+VG + D Sbjct: 401 NSLPNLRGEVVLDDRTQMTIGKRLKDAKILGYPFVVVVGQTALDD 445 >gi|310764925|gb|ADP09875.1| prolyl-tRNA synthetase [Erwinia sp. Ejp617] Length = 572 Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 130/303 (42%), Positives = 189/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LRL DR+D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQGSLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y + F R+GL ++A++G IGG+ SHEF VLA +GE + S +D+ Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFST----------GSDY- 229 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + N + + P +D +++ + PE K ++ +++LP+ Sbjct: 230 ---AANIEMAEALPPTGGRADATQQRVQFATPEAKTIAD----------LVEQFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PLPRIADIRNVVEGDASPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQIL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIW ++APF+++++ + ++ E++Y + Sbjct: 440 TMGCYGIGITRIVAAAIEQNHDERGIIWSPALAPFQVAILPMNMQKSFRVKELAEELYHQ 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P V++G + + ++E K R G + M Sbjct: 500 LRAKGIDVILDDRKERPGVMFADMELIGVPHTVVIGERNLDSEEIEYKSRRAGEKRMMKT 559 Query: 432 EEVINY 437 E++++ Sbjct: 560 NEIVDF 565 >gi|259907567|ref|YP_002647923.1| prolyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|224963189|emb|CAX54673.1| Prolyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|283477409|emb|CAY73325.1| proS [Erwinia pyrifoliae DSM 12163] Length = 572 Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 130/303 (42%), Positives = 189/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LRL DR+D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQGSLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y + F R+GL ++A++G IGG+ SHEF VLA +GE + S +D+ Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFST----------GSDY- 229 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + N + + P +D +++ + PE K ++ +++LP+ Sbjct: 230 ---AANIEMAEALPPTGGRADATQQRVQFATPEAKTIAD----------LVEQFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PLPRIADIRNVVEGDASPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQIL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIW ++APF+++++ + ++ E++Y + Sbjct: 440 TMGCYGIGITRIVAAAIEQNHDERGIIWSPALAPFQVAILPMNMQKSFRVKELAEELYHQ 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P V++G + + +VE K R G + M Sbjct: 500 LRAKGIDVILDDRKERPGVMFADMELIGIPHTVVIGERNLDSEEVEYKSRRAGEKRMMKT 559 Query: 432 EEVINY 437 E++++ Sbjct: 560 NEIVDF 565 >gi|261344716|ref|ZP_05972360.1| hypothetical protein PROVRUST_05973 [Providencia rustigianii DSM 4541] gi|282567158|gb|EFB72693.1| proline--tRNA ligase [Providencia rustigianii DSM 4541] Length = 576 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y WLP G + L V I+REE Sbjct: 1 MRTSKYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYDWLPTGVRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MENAGAIEVSLPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 EITSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+G + A++G IGG+ SHEF VLA +GE V S + DF + N +F Sbjct: 181 YSKIFTRIGFDFRAVLADTGSIGGNASHEFQVLAQSGEDDVVFSTE-SDF---AANIEFA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++ N Q AP + ++H L D+ N + A +E +++LP+ Sbjct: 237 EAVAPNV---QRAAP---SEEMH---LVDT--PNAKTIAELVE---------QFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 115/194 (59%), Gaps = 3/194 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P T D+ N + D P+ K + RGIEVGHIF GTKYS M A+ + +G + V Sbjct: 380 PLPETYDLRNVVVGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKASVQNEEGHNQIV 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE SHD +GIIW D++APF+++++ + H ++ EK+YA Sbjct: 440 TMGCYGIGVTRIVAAAIEQSHDDRGIIWSDAIAPFQVAILPMNMHKSYRVKEVAEKLYAD 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV +DD E+ G FA +L+G P +++G + + ++VE K R + + + L Sbjct: 500 LKAQGIDVIFDDRKERPGVMFADMELIGVPYTIVIGDRNLDTNQVEYKSRRSDDKALVGL 559 Query: 432 EEVINYASHRFSNN 445 + V+++ + + N Sbjct: 560 DNVVSFLKEKLATN 573 >gi|238897616|ref|YP_002923295.1| proline tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259511602|sp|C4K3K4|SYP_HAMD5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|229465373|gb|ACQ67147.1| proline tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 579 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 128/277 (46%), Positives = 181/277 (65%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L + I+REE Sbjct: 1 MRTTQYLLSTLKELPADAEIISHQLMLRAGMIRKLASGLYTWLPTGTRVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW ES R++ YG E+LR ADR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNKAGAIEVVMPIVQPADLWQESERWEHYGPELLRFADRSERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFG+MR+REFLMKDAYSF T E + +Y M+ + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEIRPRFGIMRAREFLMKDAYSFHNTLESLQETYQTMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y +IF R+ L ++A++G IGG SHEF VLAD+GE ++ S + + + Sbjct: 181 YTKIFERMQLNFRAVQADTGSIGGSRSHEFQVLADSGEDEIVFSTVSDFAANIELAEALV 240 Query: 233 PSEN----------TDFDDIISLNSIVEQWTAPYAAT 259 P E D + +++ +VEQ++ P T Sbjct: 241 PHEKRASPCETLRIIDTPNAKTIDQLVEQFSIPIEKT 277 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 121/199 (60%), Gaps = 11/199 (5%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D P+ K + RGIEVGHIF GTKYS M A +G +G+ + Sbjct: 380 PLPIIEDLRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSQAMGAKVQGENGRQQMM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYA 370 MG YGIG R+VAA IE HD GI+WP+++APF++++ I++K D V R E++YA Sbjct: 440 IMGCYGIGVSRLVAAAIEQHHDQHGILWPEAIAPFQVAILPIHLKKSDAV-RQEAERLYA 498 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI----R 426 LS +G DV +DD E+ G FA +L+G P +I+G + + ++++E ++R GI + Sbjct: 499 ELSSLGMDVIFDDRQERPGVMFADMELIGIPHTLIIGDRDLENNELEYRYR--GIDDHKK 556 Query: 427 EDMSLEEVINYASHRFSNN 445 + + + +V+++ + +++ Sbjct: 557 QQLKISDVVSFLLEKINSH 575 >gi|15596153|ref|NP_249647.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|107100413|ref|ZP_01364331.1| hypothetical protein PaerPA_01001438 [Pseudomonas aeruginosa PACS2] gi|218893073|ref|YP_002441942.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] gi|81857350|sp|Q9I502|SYP_PSEAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701320|sp|B7UXX6|SYP_PSEA8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|9946862|gb|AAG04345.1|AE004529_11 prolyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|218773301|emb|CAW29113.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] Length = 571 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 130/279 (46%), Positives = 189/279 (67%), Gaps = 14/279 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DA + SH+L+LR GMI + + G+Y+WLP+G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAVVISHQLLLRAGMIRRLASGLYTWLPMGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKDRHEREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REF+MKDAYSF L+ + + +Y+ M+ + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHLSQDSLQQTYDGMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL P++A++G IGG SHEF VLA++GE + + S+++D+ Sbjct: 181 YSKIFSRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDI----------VFSDSSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 I V + +A +AT D+ +L D+ P K ++A Sbjct: 231 ANIEKAEAVPRESARGSATEDM---RLVDT-PNTKTIAA 265 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 113/193 (58%), Gaps = 4/193 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M + GK + Sbjct: 378 PLPEVADLRNVVEGDPSPDGKGTLVIKRGIEVGHIFQLGTKYSEAMKLSVLSEQGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE +HD +GI+WP ++APF+I+L+ +K + + A +K+YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNHDERGILWPSALAPFQIALVPLKYETESVKQATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P ++++ + +S+ +E K R +++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGVKFADMELIGIPHRIVISDRGLSEGVLEYKGRRDSESQNLP 557 Query: 431 LEEVINYASHRFS 443 + E++++ + + S Sbjct: 558 IGELMSFITEKLS 570 >gi|116048881|ref|YP_792318.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|313105843|ref|ZP_07792106.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa 39016] gi|122257988|sp|Q02IB8|SYP_PSEAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|115584102|gb|ABJ10117.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|310878608|gb|EFQ37202.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa 39016] Length = 571 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 130/279 (46%), Positives = 189/279 (67%), Gaps = 14/279 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DA + SH+L+LR GMI + + G+Y+WLP+G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAVVISHQLLLRAGMIRRLASGLYTWLPMGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKDRHEREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REF+MKDAYSF L+ + + +Y+ M+ + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHLSQDSLQQTYDGMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL P++A++G IGG SHEF VLA++GE + + S+++D+ Sbjct: 181 YSKIFSRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDI----------VFSDSSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 I V + +A +AT D+ +L D+ P K ++A Sbjct: 231 ANIEKAEAVPRESARGSATEDM---RLVDT-PNTKTITA 265 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 112/193 (58%), Gaps = 4/193 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M GK + Sbjct: 378 PLPEVADLRNVVEGDPSPDGKGTLVIKRGIEVGHIFQLGTKYSEAMKLNVLSEQGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE +HD +GI+WP ++APF+I+L+ +K + + A +K+YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNHDERGILWPSALAPFQIALVPLKYETESVKQATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P ++++ + +++ +E K R +++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGVKFADMELIGIPHRIVISDRGLNEGVLEYKGRRDSESQNLP 557 Query: 431 LEEVINYASHRFS 443 + E++++ + + S Sbjct: 558 IGELMSFITEKLS 570 >gi|152984493|ref|YP_001349901.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PA7] gi|166980141|sp|A6VA16|SYP_PSEA7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150959651|gb|ABR81676.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PA7] Length = 571 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 130/279 (46%), Positives = 189/279 (67%), Gaps = 14/279 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DA + SH+L+LR GMI + + G+Y+WLP+G + L V ++REE Sbjct: 1 MRTSQYLLSTLKETPADAVVISHQLLLRAGMIRRLASGLYTWLPMGLRVLRKVETVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKDRHEREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REF+MKDAYSF L E + +Y+ M+ + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHLNQESLQATYDGMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL P++A++G IGG SHEF VLA++GE + + S+++D+ Sbjct: 181 YSKIFTRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDI----------VFSDSSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 I V + +A AA+ D+ +L D+ P+ K ++A Sbjct: 231 ANIEKAEAVPRESARGAASEDM---RLVDT-PDTKTIAA 265 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 113/193 (58%), Gaps = 4/193 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M + GK + Sbjct: 378 PLPEVADLRNVVEGDPSPDGKGTLVIKRGIEVGHIFQLGTKYSEAMKLSVLSEQGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE +HD +GI+WP ++APF+I+L+ +K + R A +++YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNHDERGILWPSALAPFQIALVPLKYETESVRQATDRLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +LLG P +++V + +++ +E K R +++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGVKFADMELLGIPHRIVVSDRGLNEGVLEYKGRRDSESQNLP 557 Query: 431 LEEVINYASHRFS 443 + E++++ + + S Sbjct: 558 IGELMSFITEKLS 570 >gi|296390688|ref|ZP_06880163.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PAb1] Length = 571 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 130/279 (46%), Positives = 189/279 (67%), Gaps = 14/279 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DA + SH+L+LR GMI + + G+Y+WLP+G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAVVISHQLLLRAGMIRRLASGLYTWLPMGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKDRHEREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REF+MKDAYSF L+ + + +Y+ M+ + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHLSQDSLQQTYDGMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL P++A++G IGG SHEF VLA++GE + + S+++D+ Sbjct: 181 YSKIFSRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDI----------VFSDSSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 I V + +A +AT D+ +L D+ P K ++A Sbjct: 231 ANIEKAEAVPRESARGSATEDM---RLVDT-PNTKTIAA 265 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 112/193 (58%), Gaps = 4/193 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M GK + Sbjct: 378 PLPEVADLRNVVEGDPSPDGKGTLVIKRGIEVGHIFQLGTKYSEAMKLNVLSEQGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE +HD +GI+WP ++APF+I+L+ +K + + A +K+YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNHDERGILWPSALAPFQIALVPLKYETESVKQATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P ++++ + +++ +E K R +++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGVKFADMELIGIPHRIVISDRGLNEGVLEYKGRRDSESQNLP 557 Query: 431 LEEVINYASHRFS 443 + E++++ + + S Sbjct: 558 IGELMSFITEKLS 570 >gi|253999985|ref|YP_003052048.1| prolyl-tRNA synthetase [Methylovorus sp. SIP3-4] gi|253986664|gb|ACT51521.1| prolyl-tRNA synthetase [Methylovorus sp. SIP3-4] Length = 574 Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 169/224 (75%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ +E P++AE+ SH+LMLR G+I + G+Y+W+PLG + L V ++R+E Sbjct: 1 MRASQFFIATQKEAPQEAELPSHRLMLRAGLIKRLGSGLYTWMPLGLRVLRKVETVVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A+LW E+GR+D +G +ML++ DR++++ +GPTHEEV+TD+ R Sbjct: 61 MNKAGALELLMPAVQPAELWQETGRWDVFGPQMLKITDRHERSFCFGPTHEEVITDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + E + +Y M+ + Sbjct: 121 EIKSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHTSLESLEATYASMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y +F+RLGLK +RA++G IGGD SHEF VLAD+GE + +C Sbjct: 181 YSNVFNRLGLKFRAVRADTGAIGGDGSHEFHVLADSGEDALAYC 224 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 110/182 (60%), Gaps = 5/182 (2%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K V RGIEVGHIF TKY+ M+AT++ +G+ ++MG Sbjct: 387 VADIRNVINGDPSPDGKGVLELCRGIEVGHIFQLRTKYAEAMNATYQAENGELKIMEMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSK 374 YGIG R+V A IE +D +GII+P ++APF +++ I + D V +DA +YA L + Sbjct: 447 YGIGVSRIVGAAIEQGNDARGIIFPAAMAPFSVAIAPIGMDRSDAV-KDAALALYAELQQ 505 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD GE+ G FA +L+G P +V++G + + + +VE + R + ++L E+ Sbjct: 506 AGIDVLLDDRGERPGVMFADLELIGIPHRVVIGDRGLKEGQVEYQARTDEQAQSVALSEI 565 Query: 435 IN 436 ++ Sbjct: 566 VS 567 >gi|329905673|ref|ZP_08274169.1| Prolyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gi|327547550|gb|EGF32358.1| Prolyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 578 Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 161/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SH+LM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MRASRFFISTLKEAPADAEIVSHQLMMRAGMIKRLGSGIYTYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR+ YG E++R+ DR+ + I PT EEV+TDI R+ Sbjct: 61 MNRAGAVELLMPVVQPAELWQETGRWQEYGAELMRVKDRHGRDFIIQPTSEEVITDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FY +Q KFRDE RPRFG+MR REF MKDAYSFD P G K SY MF + Sbjct: 121 EIKSYRQLPVNFYHVQTKFRDERRPRFGLMRGREFTMKDAYSFDRDPAGMKQSYQIMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y+RIF R GL P+ A++G IGG SHEF V+ADTGE V+C Sbjct: 181 YVRIFTRFGLGFRPVAADNGAIGGSGSHEFHVIADTGEDAIVYC 224 Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 101/170 (59%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P + D+ N D+ P+ K V A RGIEVGH+F GT+YS M ATF +GK + Sbjct: 386 PEPVSFDLRNVVAGDASPDGKGVLAIQRGIEVGHVFQLGTRYSEDMKATFLDENGKPQLL 445 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE + D KGIIWP S+APF+I L + ++ + A + + A Sbjct: 446 QMGCYGIGVTRILGAAIEQNFDDKGIIWPVSIAPFEIVLCPMGYDRNEAVKTAADTLLAD 505 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G D DD GE+ G+ FA +L+G P ++++G + + D K+E + R Sbjct: 506 LLAAGIDAILDDRGERPGAMFADWELIGVPHRIVIGDRGLKDGKLEYQGR 555 >gi|313201958|ref|YP_004040616.1| prolyl-tRNA synthetase [Methylovorus sp. MP688] gi|312441274|gb|ADQ85380.1| prolyl-tRNA synthetase [Methylovorus sp. MP688] Length = 574 Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 169/224 (75%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ +E P++AE+ SH+LMLR G+I + G+Y+W+PLG + L V ++R+E Sbjct: 1 MRASQFFIATQKEAPQEAELPSHRLMLRAGLIKRLGSGLYTWMPLGLRVLRKVETVVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A+LW E+GR+D +G +ML++ DR++++ +GPTHEEV+TD+ R Sbjct: 61 MNKAGALELLMPAVQPAELWQETGRWDVFGPQMLKITDRHERSFCFGPTHEEVITDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + E + +Y M+ + Sbjct: 121 EIKSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHTSLESLEATYATMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y +F+RLGLK +RA++G IGGD SHEF VLAD+GE + +C Sbjct: 181 YSNVFNRLGLKFRAVRADTGAIGGDGSHEFHVLADSGEDALAYC 224 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 110/182 (60%), Gaps = 5/182 (2%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K V RGIEVGHIF TKY+ M+AT++ +G+ ++MG Sbjct: 387 VADIRNVINGDPSPDGKGVLELCRGIEVGHIFQLRTKYAEAMNATYQAENGELKIMEMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSK 374 YGIG R+V A IE +D +GII+P ++APF +++ I + D V +DA +YA L + Sbjct: 447 YGIGVSRIVGAAIEQGNDARGIIFPAAMAPFSVAIAPIGMDRSDAV-KDATLALYAELQQ 505 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD GE+ G FA +L+G P +V++G + + + +VE + R + ++L E+ Sbjct: 506 AGIDVLLDDRGERPGVMFADLELIGIPHRVVIGDRGLKEGQVEYQARTDEQAQSVALSEI 565 Query: 435 IN 436 ++ Sbjct: 566 VS 567 >gi|220904224|ref|YP_002479536.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254782896|sp|B8IZD1|SYP_DESDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219868523|gb|ACL48858.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 574 Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 163/224 (72%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++P L+E+P DAE+ SHKL+LR GM+ + + G+Y +LPLG + ++ + +REE Sbjct: 1 MRFSSCYIPTLKESPADAEVISHKLLLRAGMVRRLTSGLYIYLPLGLRVINKIARTVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q DLW E+GR++ YGKE+LR DRN++ GPTHEEV+TD+ R Sbjct: 61 MEKAGFRELLMPMVQPGDLWKETGRWEHYGKELLRFKDRNEREYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKD YSFD T EG++ SY M+ + Sbjct: 121 EVRSYRQLPVRLYQVQTKFRDEIRPRFGLMRGREFMMKDGYSFDATAEGAEESYKIMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y+ IF RLGL+ + A++G IGG+ SHEF+VLADTGE T FC Sbjct: 181 YMSIFSRLGLRFRAVEADTGSIGGNFSHEFMVLADTGEDTIAFC 224 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/190 (40%), Positives = 105/190 (55%), Gaps = 9/190 (4%) Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ ++ V W A T+D D P + RGIEVGHIF G KYS M A Sbjct: 370 LARDAAVTAWADLRAITAD-------DQCPRCGGRMELTRGIEVGHIFMLGLKYSEAMHA 422 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F +GK+ + MG YGIG RV AA IE +HD GI++P VAPF+ L+N+ + Sbjct: 423 VFLDENGKERTMIMGCYGIGVSRVAAAAIEQNHDEHGIVFPPPVAPFECVLLNLDPRSEE 482 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 E+IYA L +G +V DD E+ G +F ADLLG P+Q++VG K + VE K Sbjct: 483 VNAKVEEIYALLQGMGIEVLLDDREERPGVKFKDADLLGIPMQLVVGGKGLGRGIVECKD 542 Query: 421 RLTGIREDMS 430 R TG + ++S Sbjct: 543 RRTGEKGELS 552 >gi|302391162|ref|YP_003826982.1| prolyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] gi|302203239|gb|ADL11917.1| prolyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] Length = 569 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 125/226 (55%), Positives = 163/226 (72%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ + P L+E P DAE+ SH+LMLR G++ + GIYS LPLG K + V IIREE Sbjct: 1 MKMSQMYSPTLKETPADAEVVSHQLMLRAGLMRKLGSGIYSHLPLGYKVIQKVEDIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P LQ A+LW ES R+ YG E++RL DR+ + GPTHEEV+TD+ + Sbjct: 61 MNKAGAQEVLLPALQPAELWKESNRWADYGPELMRLEDRHKRDFCLGPTHEEVITDLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY++LPF YQIQ KFRDE+RPRFGV+RSREF+MKDAYSF+ E SY KM+ S Sbjct: 121 EVRSYKDLPFNLYQIQTKFRDEIRPRFGVLRSREFIMKDAYSFNPDKESLDESYEKMYDS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 Y+ IF R GL + A++GPIGG SHEF+VLAD+GE T VFCS+ Sbjct: 181 YVEIFDRCGLDFRTVVADNGPIGGTDSHEFMVLADSGEDTVVFCSE 226 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/145 (44%), Positives = 92/145 (63%), Gaps = 1/145 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIEVG +F GTKYS M AT+ +GK + MG YGIG R VAA IE +HD GI Sbjct: 403 TRGIEVGQVFKLGTKYSDSMKATYIDDNGKSQSIFMGCYGIGVTRTVAAAIEQNHDDYGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP S+AP+ + ++ + +D+ + E +Y L++ G + +DD E+ G +F ADL+ Sbjct: 463 IWPKSIAPYSVHIMQL-GNDEEIKRVSEDLYTALNQTGLEALYDDRSERAGVKFNDADLI 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLT 423 G P+QVI+G + D+K+EIK R T Sbjct: 522 GCPIQVIIGKNSLEDNKLEIKLRQT 546 >gi|312795091|ref|YP_004028013.1| Prolyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454] gi|312166866|emb|CBW73869.1| Prolyl-tRNA synthetase (EC 6.1.1.15) [Burkholderia rhizoxinica HKI 454] Length = 589 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 168/224 (75%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SH+LM+R GMI + + GIY+++P+G +++ V AI+REE Sbjct: 12 MKASRFFIGTLKEAPADAEIVSHQLMVRAGMIRRVAGGIYNYMPIGLRSIRKVEAIVREE 71 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ES R++ YG E+LR+ DR+D+ + GPTHEEV+TDI R Sbjct: 72 MNRAGAVELLMPAVQPAELWQESSRWEQYGPELLRVKDRHDRDFVVGPTHEEVVTDIARK 131 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQ+Q KFRDE+RPRFGVMR REF+MKDAYSFD G + SY KM+ + Sbjct: 132 EIKSYRQMPVNFYQVQTKFRDEIRPRFGVMRGREFIMKDAYSFDRDRAGLQLSYQKMYDA 191 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF RLGL+ + A++G IGG SHEF V+A TGE + +C Sbjct: 192 YVRIFTRLGLEFRAVAADNGAIGGTGSHEFHVIAATGEDAIAYC 235 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 3/190 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N + D P+ + RGIEVGH+F GTKYS M ATF +GK + Sbjct: 393 PEPEVADLRNVRKGDPSPDGRGELDLCRGIEVGHVFQLGTKYSEAMGATFLDENGKPAPM 452 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D +GIIWP+++APF + L + R+ K+Y Sbjct: 453 MMGCYGIGITRILGAAIEQNFDERGIIWPEAIAPFHLVLCPMGYERSDAVREQAHKLYDE 512 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + L Sbjct: 513 LLGAGMDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGRRDVEPTLLPL 572 Query: 432 EEVINYASHR 441 E+ + R Sbjct: 573 EQAAAWVVER 582 >gi|160872889|ref|ZP_02063021.1| prolyl-tRNA synthetase [Rickettsiella grylli] gi|159121688|gb|EDP47026.1| prolyl-tRNA synthetase [Rickettsiella grylli] Length = 572 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 127/224 (56%), Positives = 158/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++LP L+E P DAEI SH+LMLR GMI + + GIYSWLPLG + L V I+REE Sbjct: 1 MRSSHFYLPTLKEAPADAEIKSHQLMLRAGMIRKVASGIYSWLPLGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR A E+ +P LQ A+LW ES R+++YG E+LRL DR+ +A GPTHEE++T + R Sbjct: 61 MNRIHAQEVLLPILQPAELWQESERWEAYGPELLRLTDRHQRAFCLGPTHEEIITALVRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF +Y M S Sbjct: 121 EVRSYKQLPLIFYQIQTKFRDEIRPRFGVMRAREFMMKDAYSFHPDKTSLSETYQMMHAS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF RLGLK + A++G IGG SHEF VLA TGE +F S Sbjct: 181 YCRIFTRLGLKFRVVLADTGNIGGSQSHEFQVLAQTGEDHIFYS 224 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 110/196 (56%), Gaps = 3/196 (1%) Query: 254 APYAATSDVHNEKLFDSLPENK-RVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P +D+ ++ D P+ K R+ RGIEVGHIF G KY+ M+A + ++ Sbjct: 376 CPLPPIADLRKVRVGDPSPDGKGRLKMERGIEVGHIFQLGNKYACAMNARITTSHAREIP 435 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYA 370 ++MG YGIG RVV IE HD +GIIWP ++APF++ +I I H ++ ++A + +Y Sbjct: 436 MEMGCYGIGISRVVGGAIEQCHDDQGIIWPSAMAPFQVVIIPIAYHRNRSVKEAADTLYQ 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L + DV DD E+ G FA DL+G P ++++ K + + V K R+ ++ Sbjct: 496 QLQQARIDVLLDDRKERPGKLFADNDLIGIPHRLVINEKMILEKTVAYKARIEKHEHPVN 555 Query: 431 LEEVINYASHRFSNNR 446 LE ++N+ + + R Sbjct: 556 LENILNFLHQKINIPR 571 >gi|224823461|ref|ZP_03696570.1| prolyl-tRNA synthetase [Lutiella nitroferrum 2002] gi|224603916|gb|EEG10090.1| prolyl-tRNA synthetase [Lutiella nitroferrum 2002] Length = 571 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 133/270 (49%), Positives = 176/270 (65%), Gaps = 13/270 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DA+I S KLMLR G I + + GIYSW+P+G K+L V AI+REE Sbjct: 1 MRASQFFISTLKEAPADADIVSQKLMLRAGFIRKAAAGIYSWMPMGLKSLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A LW E+GR+D+ G+EMLR DR+++ + PT EEV+TD+ R Sbjct: 61 MNRAGAIEVIMPIVQPAGLWQETGRWDTMGEEMLRFKDRHERDFVIQPTSEEVVTDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQIQ KFRDE RPRFGVMR REF MKDAYSFD + + + SY+ M+ + Sbjct: 121 DLKSYRALPKNFYQIQTKFRDERRPRFGVMRGREFTMKDAYSFDRSADAAGVSYDNMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL + A++G IGGD SHEF V+A TGE + D +D+ Sbjct: 181 YCKIFDRIGLTYRAVAADTGAIGGDRSHEFQVIAATGEDAIIYCPD----------SDYA 230 Query: 241 DIISLNSIVE---QWTAPYAATSDVHNEKL 267 I L V + AP AA V+ K+ Sbjct: 231 ANIELAEAVAPAGERPAPGAAMEKVYTPKV 260 Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 82/189 (43%), Positives = 114/189 (60%), Gaps = 9/189 (4%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V A RGIEVGH+FY GTKYS M+ATF DGK + Sbjct: 379 PEPIVADIRNVVAGDPSPDGKGVLAIERGIEVGHVFYLGTKYSQAMNATFLDEDGKPKFF 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC--RDACEKIYA 370 +MG YGIG R++ A IE + D KGIIWPD++APF + L + +D+ + A +++YA Sbjct: 439 EMGCYGIGVTRILGAAIEQNFDAKGIIWPDAIAPFTVVLCPV-GYDRSAEVKAAADQLYA 497 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR----LTGIR 426 L G DV DD GE+ G+ FA +L+G P +V +G + + + KVE +HR TG+ Sbjct: 498 ELVANGVDVILDDRGERPGAMFADWELIGVPHRVTIGDRGLKEGKVEYQHRRDSEATGMA 557 Query: 427 EDMSLEEVI 435 D LE V+ Sbjct: 558 VDAILEHVL 566 >gi|119899055|ref|YP_934268.1| prolyl-tRNA synthetase [Azoarcus sp. BH72] gi|152074747|sp|A1K976|SYP_AZOSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119671468|emb|CAL95381.1| unnamed protein product [Azoarcus sp. BH72] Length = 581 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 132/260 (50%), Positives = 173/260 (66%), Gaps = 6/260 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++F+ L+E P DAE+ S KLMLR GMI + + GIY++LP+G K++ V IIREE Sbjct: 1 MRARQFFISTLKEAPADAEVVSQKLMLRAGMIRKVAAGIYNYLPMGLKSIRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q ++LW E+GR+D G EMLR DR+++ PT EEV+TDI R Sbjct: 61 MNRAGALELTMPLVQPSELWQETGRWDKMGPEMLRFKDRHERDFALQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQIQ KFRDE RPRFGVMR REF MKDAYSFD + E + SY+ M+ + Sbjct: 121 ELKSYRQLPKNFYQIQTKFRDERRPRFGVMRGREFTMKDAYSFDRSAEAAGESYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDF 239 Y RIF RLGL + A++G IGGD SHEF V+ADTGE V+C + N + Sbjct: 181 YSRIFDRLGLTYRAVAADTGAIGGDRSHEFQVIADTGEDAIVYCPDSSY-----AANIEL 235 Query: 240 DDIISLNSIVEQWTAPYAAT 259 + +SL +AP A T Sbjct: 236 AEALSLLPARAGASAPLAKT 255 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 75/192 (39%), Positives = 108/192 (56%), Gaps = 6/192 (3%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K A RGIEVGH+FY GTKYS M+ATF DGK + +MG Sbjct: 393 VADIRNVVEGDPSPDGKGKLAIQRGIEVGHVFYLGTKYSKAMNATFLDVDGKPKHFEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R++ A IE +HD +GIIWP S+APF++ + + + + RD +K+Y L Sbjct: 453 YGIGVTRILGAAIEQNHDERGIIWPASIAPFEVVICPVGWSKSEAVRDEAQKLYDALVAA 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +V +G + + + E + R +++ E+ Sbjct: 513 GVDVILDDRDERPGVMFADWELIGVPHRVTIGDRGLKEGVAEYQGRRDPEASRVAVAEI- 571 Query: 436 NYASHRFSNNRP 447 A H S RP Sbjct: 572 --APHLISRLRP 581 >gi|33152900|ref|NP_874253.1| prolyl-tRNA synthetase [Haemophilus ducreyi 35000HP] gi|81836009|sp|Q7VKI5|SYP_HAEDU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33149125|gb|AAP96642.1| prolyl-tRNA synthetase [Haemophilus ducreyi 35000HP] Length = 571 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 157/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVISHQLMLRAGMIRPTAAGLYNWLPTGVKILKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ES R++ YG E+LR ADR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEILMPVVQPAELWQESSRWEQYGPELLRFADRGKRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF TPE + +Y M+ Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTTPESLQQTYEVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL ++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YHRIFTRLGLDFRTVQADTGSIGGSASHEFQVLASSGEDDIVFSTE 226 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/184 (39%), Positives = 108/184 (58%), Gaps = 4/184 (2%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N + D P+ + + RGIEVGHIF G KYS M+AT +G DGK + MG YG Sbjct: 384 DLRNVVVGDPSPDGRGILLIKRGIEVGHIFQLGQKYSAAMNATVQGEDGKPLVMTMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAHDQVCRDA-CEKIYARLSKVG 376 IG RVVAA IE HD +GIIWP D +APF ++++ + A E++Y L G Sbjct: 444 IGVTRVVAAAIEQHHDERGIIWPTDEIAPFTVAIVPMNMFKSASVQAFAEQLYTDLMAQG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD E+ G FA +L+G P +++G K + + +VE K+R TG + ++ ++++ Sbjct: 504 VDVILDDRKERPGVMFADMELIGVPHMIVIGEKNLENGEVEYKNRRTGEKTMIAKDQLLA 563 Query: 437 YASH 440 Y + Sbjct: 564 YLAQ 567 >gi|298528346|ref|ZP_07015750.1| prolyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298511998|gb|EFI35900.1| prolyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 577 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 126/238 (52%), Positives = 166/238 (69%), Gaps = 1/238 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P L+E P +AE+ SHKLMLR GMI + + GIY++LP G +AL ++ +IR E Sbjct: 1 MRWSRYFMPTLKEEPAEAEVVSHKLMLRAGMIRKLTAGIYTYLPAGWRALQKISEVIRGE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR AIE+ +P +Q DLW E+GR+++YGKE+LR DR+D+ GPTHEEV+TD+ R Sbjct: 61 MNRFYAIELLMPAVQPGDLWKETGRWEAYGKELLRFRDRHDRDYCIGPTHEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G+ SY M + Sbjct: 121 EVSSYRQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDKDEAGAAQSYEWMRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 Y+ IF +LGL+ + A+SG IGG +S EF+VLADTGE V + DF E + Sbjct: 181 YVSIFEKLGLQFRGVEADSGAIGGSVSQEFMVLADTGE-DVIATCTHCDFAANLEKAE 237 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 66/154 (42%), Positives = 97/154 (62%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A + G + + MG YGIG RV+AA IE +HD GII Sbjct: 403 KGIEVGHIFMLGAKYSQSMNAAYLDEHGAEKPLIMGCYGIGVGRVLAACIEQNHDENGII 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 + ++APF++++I + D++ R+ E +Y L DV DD E+ G +F DL+G Sbjct: 463 FTPAIAPFEVTIIALNPKDEMVRNHSESLYNELCSQNVDVLLDDRDERPGFKFKDCDLVG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 PLQVIVG+K + + +E+K R +G R ++ LE+ Sbjct: 523 SPLQVIVGAKGIKNGVLEVKERHSGHRHELPLED 556 >gi|300715419|ref|YP_003740222.1| Prolyl-tRNA synthetase [Erwinia billingiae Eb661] gi|299061255|emb|CAX58364.1| Prolyl-tRNA synthetase [Erwinia billingiae Eb661] Length = 572 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNVFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHASQESLQATYDDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSQSFKRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSTE 226 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGK 308 Q P D+ N D+ P+ K RGIEVGHIF GTKYS M A+ +G DG+ Sbjct: 376 QRDLPLPRVEDIRNVVEGDASPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGR 435 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEK 367 + + MG YGIG R+VAA IE +HD +GIIWP ++APF+++++ + H ++ E+ Sbjct: 436 NQILTMGCYGIGITRIVAASIEQNHDERGIIWPAALAPFQVAILPMNMHKSFRVKELAEE 495 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA+L G DV DD E+ G FA +L+G P +++G + + +VE K R G + Sbjct: 496 LYAQLRAKGIDVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEVEYKSRREGEKR 555 Query: 428 DMSLEEVINY 437 + E++++ Sbjct: 556 MIKTGEILDF 565 >gi|117925064|ref|YP_865681.1| prolyl-tRNA synthetase [Magnetococcus sp. MC-1] gi|152112926|sp|A0L8I2|SYP_MAGSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|117608820|gb|ABK44275.1| prolyl-tRNA synthetase [Magnetococcus sp. MC-1] Length = 576 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 122/218 (55%), Positives = 160/218 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +A++ SHKLMLR G+I Q GIY+WLP+G K L V I+R+E Sbjct: 1 MRFSQTLIPTLKEEPSEAQVISHKLMLRAGLIRQLGAGIYTWLPMGLKVLRKVETIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P++Q A+LW ESGR+ YGKE+LR+ DR++++ YGPTHEEV++D+ R Sbjct: 61 MDRAGAQEVLMPSIQPAELWEESGRWKMYGKELLRITDRHNRSFCYGPTHEEVISDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFG+MR REFLMKDAYSFD+ SY MF + Sbjct: 121 EIHSYKQLPANFYQIQTKFRDEVRPRFGIMRGREFLMKDAYSFDIDEAALDKSYRLMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF+RL LK P+ A++G IGG SHEF VLA +GE Sbjct: 181 YNKIFNRLDLKFRPVEADTGAIGGASSHEFHVLAQSGE 218 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 3/195 (1%) Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS---ARGIEVGHIFYFGTKYSLPMSAT 301 L + Q P D+ N + D P S +RGIEVGH+F G KYS M Sbjct: 370 LTGVNWQRDLPKPEFVDLRNVEEGDGCPRCGPGSMELSRGIEVGHVFKLGYKYSEAMGVK 429 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DGK+ + MG YGIG R+VAA IE +HD GIIWP ++APF++ ++ + ++ Sbjct: 430 VLDEDGKEKPLIMGCYGIGVSRIVAAAIEQNHDENGIIWPLAIAPFEVEVVVMNPNESDA 489 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + E+I A+L +V DD E+ GS+F ADLLG P +V+VG + + E+K+R Sbjct: 490 MEKAEEITAQLQAGQLEVLLDDRDERAGSKFKDADLLGAPYRVLVGGRAFKEGVCEVKNR 549 Query: 422 LTGIREDMSLEEVIN 436 +G+ E + +E V+ Sbjct: 550 RSGVVEKIPVESVVE 564 >gi|183597570|ref|ZP_02959063.1| hypothetical protein PROSTU_00851 [Providencia stuartii ATCC 25827] gi|188023065|gb|EDU61105.1| hypothetical protein PROSTU_00851 [Providencia stuartii ATCC 25827] Length = 575 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 135/303 (44%), Positives = 186/303 (61%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y WLP G + L V I+REE Sbjct: 1 MRTSKYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYDWLPTGVRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G+IE+S+P +Q ADLW ESGR++ YG E+LR ADR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MENAGSIEVSLPVVQPADLWQESGRWEQYGPELLRFADRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +QIQ KFRDE+RPRFG+MRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 EITSYKQLPLNLFQIQTKFRDEVRPRFGIMRSREFIMKDAYSFHTSQESLQETYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+G ++A++G IGG SHEF VLA +GE + S +DF Sbjct: 181 YSKIFTRIGFDFRAVQADTGSIGGSASHEFQVLAQSGEDDIVFST----------GSDFA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I L + T A T ++ +L D+ N + A +E ++ LP+ Sbjct: 231 ANIELAEAITPLTPRSAPTEEM---RLVDT--PNAKTIAELVE---------QFGLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 74/190 (38%), Positives = 113/190 (59%), Gaps = 3/190 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T D+ N D P+ K + RGIEVGHIF GTKYS M A+ + +G + V MG Sbjct: 384 TFDLRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKASVQNEEGHNQIVTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG R+VAA IE SHD +GIIWPD++APF ++++ + H ++ EK+YA L Sbjct: 444 YGIGVTRIVAAAIEQSHDERGIIWPDAIAPFHVAILPMNMHKSYRVKEVAEKLYADLKAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV +DD E+ G FA +L+G P +++G + + +++VE K R + + L+ V+ Sbjct: 504 GIDVIFDDRKERPGVMFADMELIGVPYTIVIGDRNLDNNQVEYKARRNDEKALIGLDNVV 563 Query: 436 NYASHRFSNN 445 ++ + +N Sbjct: 564 SFLKEKLANT 573 >gi|262376731|ref|ZP_06069959.1| prolyl-tRNA synthetase [Acinetobacter lwoffii SH145] gi|262308441|gb|EEY89576.1| prolyl-tRNA synthetase [Acinetobacter lwoffii SH145] Length = 572 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 118/226 (52%), Positives = 162/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L+ V AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGVRVLNKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G++++ +P Q A LW ESGRY YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MDKVGSLQVYMPVTQPASLWEESGRYVQYGPELLRFNDRHGNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQ+Q KFRDE+RPRFGVMRSREF+MKDAYSF E + +Y+ M+ + Sbjct: 121 ELKSYKQLPANFYQVQTKFRDEIRPRFGVMRSREFIMKDAYSFHANQESLQQTYDDMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YCKIFTRLGLNFRPVQADTGSIGGSGSHEFHVLASSGEDDIAFSTE 226 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 72/185 (38%), Positives = 101/185 (54%), Gaps = 3/185 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A + D+ N D P+ K RGIEVGHIF G KYS + G DGK Sbjct: 383 AQFTEVYDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGQKYSEALGCKVLGEDGKPFT 442 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYA 370 V MG YGIG RVVA+ IE + D KGIIWP ++APF+++++ + AH +A E +YA Sbjct: 443 VTMGCYGIGVTRVVASAIEQNFDEKGIIWPTAIAPFEVAIVPMNAHKSPRTMEAAEALYA 502 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G DV DD E+ G +F+ +L G P ++++G K + E K R ++S Sbjct: 503 ELQAAGFDVLLDDRNERPGVKFSDLELTGIPHRIVIGEKGLDAGTFEYKGRRDAESVNIS 562 Query: 431 LEEVI 435 EE++ Sbjct: 563 KEELL 567 >gi|56459994|ref|YP_155275.1| prolyl-tRNA synthetase [Idiomarina loihiensis L2TR] gi|81821672|sp|Q5QW31|SYP_IDILO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56179004|gb|AAV81726.1| Prolyl-tRNA synthetase [Idiomarina loihiensis L2TR] Length = 567 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 158/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAEI SH+LMLR GMI + + G+Y+W P G + L V ++REE Sbjct: 1 MRSSKYLLSTLKETPSDAEIVSHQLMLRAGMIRKVAAGLYTWTPTGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P +Q ADLW ESGR+D YG E+LR+ DRN + + GPTHEE+++ + R Sbjct: 61 MEAINALEILMPMVQPADLWQESGRWDDYGPELLRIKDRNQRDFLLGPTHEEIISQLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T +QIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLTLFQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDESLQKTYDDMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF RLGL P+ A++G IGG SHEF VLA +GE + S Sbjct: 181 YCRIFERLGLDYRPVIADTGSIGGSHSHEFHVLASSGEDAIAFS 224 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 3/185 (1%) Query: 261 DVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P + K ARGIEVGHIF G KYS M GK + MG YG Sbjct: 383 DIRNVVAGDPSPCGQGKVKIARGIEVGHIFQLGKKYSDAMKVGVLSESGKHETLTMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGC 377 IG R+VAA IE ++D +GI WP+++APF++ ++ + H ++A EK+Y L G Sbjct: 443 IGVSRIVAAAIEQNNDERGICWPEALAPFQVVIVPMNMHKSARVQEAAEKLYTDLKAQGI 502 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV +DD E+ G F +L+G P QV+VG + + +++VE + R G ++ ++L++ I++ Sbjct: 503 DVLFDDRKERPGVMFTDMELIGIPHQVVVGERNLDENQVEYQSRKGGEKQKINLDDCISF 562 Query: 438 ASHRF 442 + Sbjct: 563 IQQQL 567 >gi|329298700|ref|ZP_08256036.1| prolyl-tRNA synthetase [Plautia stali symbiont] Length = 572 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 163/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGIRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR+ DR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWEESGRWEQYGPELLRIKDRHERPFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNVYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGSGSHEFQVLAQSGEDDVIFSSE 226 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 110/192 (57%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + Sbjct: 380 PETRVEDIRNVVEGDPSPDGKGMLMIKRGIEVGHIFQLGTKYSDAMKAAVQGEDGRNQIM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWP ++APF+++++ + H ++ E++Y Sbjct: 440 TMGCYGIGITRVVAAAIEQNHDERGIIWPAALAPFEVAILPMNMHKSFRVKELAEQLYNE 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + + ++E K R ++ + Sbjct: 500 LRAKGIDVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDNQEIEYKARAASEKQMIKQ 559 Query: 432 EEVINYASHRFS 443 +++++ S + Sbjct: 560 HDIVDFLSRALN 571 >gi|161510954|ref|YP_089255.2| prolyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E] gi|114152209|sp|Q65QU0|SYP_MANSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 571 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 122/226 (53%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L+ V IIREE Sbjct: 1 MRTSKYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPSGIRVLEKVKNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKSGAIEVLMPVVQPAELWQESGRWEQYGLELLRFNDRGNRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTKESLQATYDVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE 226 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 111/182 (60%), Gaps = 4/182 (2%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K + RGIEVGHIF G KYS M+AT +G DGK + MG Y Sbjct: 383 ADLRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGQKYSEAMNATVQGEDGKPLVMTMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAHDQVCRDA-CEKIYARLSKV 375 GIG RVVA+ IE HD +GIIWP D++APF ++++ + H A E++Y L Sbjct: 443 GIGVTRVVASAIEQHHDERGIIWPSDAIAPFTVAIVPMNMHKSESVQAYAEELYQTLLAQ 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V +DD E+ G FA +L+G P VI+G K + + ++E K+R T ++ ++ ++++ Sbjct: 503 GVEVIFDDRKERPGVMFADMELIGVPHMVIIGEKNLENGEIEYKNRRTSEKQMIAKDQLL 562 Query: 436 NY 437 ++ Sbjct: 563 DF 564 >gi|167856063|ref|ZP_02478806.1| prolyl-tRNA synthetase [Haemophilus parasuis 29755] gi|219871797|ref|YP_002476172.1| prolyl-tRNA synthetase [Haemophilus parasuis SH0165] gi|254782903|sp|B8F7C2|SYP_HAEPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167852812|gb|EDS24083.1| prolyl-tRNA synthetase [Haemophilus parasuis 29755] gi|219692001|gb|ACL33224.1| prolyl-tRNA synthetase [Haemophilus parasuis SH0165] Length = 571 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 122/226 (53%), Positives = 157/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPLASGMYNWLPTGLRVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA+E+ +P +Q ADLWVES R++ YG E+LR DR D+ + GPTHEEV+TD+ R Sbjct: 61 MNKSGALEVEMPVVQPADLWVESERWEDYGPELLRFKDRGDRPFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E + +Y+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHTSKESLQETYDVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF RLGL P+ A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSNIFTRLGLDFRPVAADTGSIGGSASHEFQVLAQSGEDDVVFSTE 226 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 114/189 (60%), Gaps = 4/189 (2%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K + RGIEVGHIF GTKYS M AT +G DG+ + MG Y Sbjct: 383 ADLRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRPQTMIMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 GIG RVVAA IE HD +GIIWP D++APF ++++ + H + + E +Y L Sbjct: 443 GIGVTRVVAAAIEQHHDERGIIWPTDAIAPFTVAVVPMNMHKSESVQTFAEDLYKTLRSQ 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV +DD E+ G FA +L+G P +++G K + + ++E K+R TG ++ ++ ++++ Sbjct: 503 GVDVIFDDRKERPGVMFADMELIGVPHMLVIGEKNLENGEIEYKNRRTGEKQMIAKDQLL 562 Query: 436 NYASHRFSN 444 ++ R + Sbjct: 563 DFLKGRINQ 571 >gi|330828282|ref|YP_004391234.1| Prolyl-tRNA synthetase, family II [Aeromonas veronii B565] gi|328803418|gb|AEB48617.1| Prolyl-tRNA synthetase, family II [Aeromonas veronii B565] Length = 574 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 118/218 (54%), Positives = 156/218 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L + I+REE Sbjct: 1 MRTSQYLLSTLKETPSDAEVVSHQLMLRAGMIRKLASGMYAWLPTGLRVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+S+P +Q A+LW ESGR+D YG E+ RL DR+++ + GPTHEEV+T + R Sbjct: 61 MNNAGAVEVSMPVVQPAELWQESGRWDDYGPELCRLTDRHNRPFVLGPTHEEVITALVRY 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E +Y KM + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHIDKESLVDTYEKMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y + F R+GL P++A++G IGG SHEF VLA++GE Sbjct: 181 YCKAFTRMGLNFRPVQADTGSIGGTGSHEFQVLAESGE 218 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 70/180 (38%), Positives = 109/180 (60%), Gaps = 3/180 (1%) Query: 259 TSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P + K + RGIEVGHIF GTKYS M A+ GK ++MG Sbjct: 386 VADLRNVVEGDPSPCGQGKLLLKRGIEVGHIFQLGTKYSEAMKASVLNEAGKSVTMEMGC 445 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG R+VAA IE ++D GIIWPD++APF+++++ + H + + ++ YA L Sbjct: 446 YGIGVSRLVAAAIEQNNDQYGIIWPDAIAPFEVAIVPMNMHKSERVAEQAQQFYAELKAA 505 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV +DD E+ G FA +LLG P +++G + + + VE K R TG ++++++ ++I Sbjct: 506 GVDVLFDDRKERPGVMFADMELLGIPHAIVIGDRGLDNGVVEYKCRRTGEKQEVAISDII 565 >gi|254517451|ref|ZP_05129507.1| prolyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] gi|226911200|gb|EEH96401.1| prolyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] Length = 570 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 126/225 (56%), Positives = 159/225 (70%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR GMI + + GIY+++PLG K L NV I+REE Sbjct: 1 MKMSNMLISTLREVPAEAEIDSHKLMLRAGMIRKMASGIYNYMPLGLKVLKNVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E +Q A+LW ESGR+D YG E++RL DRN++ GPTHEEV TDI R+ Sbjct: 61 MNNAGAQEFLASAVQPAELWQESGRWDVYGAELIRLKDRNNREFCLGPTHEEVFTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD EG SYNKM + Sbjct: 121 EIKSYKQLPVNLYQIQTKYRDERRPRFGVMRSREFIMKDAYSFDKDQEGLDVSYNKMREA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 Y++IF+R G+ + P+ A+SG IGG S EF+V ++ GE VFC+ Sbjct: 181 YIKIFNRCGIDAKPVEADSGAIGGSNSAEFMVRSEVGEDDVVFCT 225 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 67/168 (39%), Positives = 100/168 (59%), Gaps = 2/168 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RG EVGHIF GTKYS M+A F +GK+ MG YGIG R +A++IE +D GI Sbjct: 401 SRGTEVGHIFKLGTKYSEAMNANFIDENGKEKPFIMGCYGIGVTRTMASIIEQHNDENGI 460 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SVAP+ +++I + D+ +IY L +G D DD E+ G +F +DL+ Sbjct: 461 VWPLSVAPYHVNIIPVNIKDEEQMKIANEIYEDLKSIGVDAILDDRNERAGVKFKDSDLM 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 G P+++ VG K V D +VE K R + + E++ +EE ++ F N+ Sbjct: 521 GIPMRITVGKKIV-DGEVEFKLRTSDM-ENIKIEEAVDRVREEFKKNK 566 >gi|288940948|ref|YP_003443188.1| prolyl-tRNA synthetase [Allochromatium vinosum DSM 180] gi|288896320|gb|ADC62156.1| prolyl-tRNA synthetase [Allochromatium vinosum DSM 180] Length = 572 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L ++E P DAEIASH+LMLR G+I + + G+Y+WLPLG + L V I+REE Sbjct: 1 MRTSEFPLQTIKETPADAEIASHRLMLRAGLIRKLAAGLYTWLPLGLRVLRRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+S+P +Q A+LW ESGR++ YG E+LR DR+ + +GPTHEE++T++ R+ Sbjct: 61 MDRAGALEVSMPAVQPAELWQESGRWEQYGPELLRFKDRHQREFCFGPTHEEIITELARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF L +Y +M + Sbjct: 121 ELKSYKQLPINFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLDDASLAETYQRMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GL P+ A++G IGG SHEF VLA +GE + S Sbjct: 181 YCRIFTRCGLDFRPVSADTGSIGGSASHEFHVLASSGEDAIAFS 224 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 77/191 (40%), Positives = 106/191 (55%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + ARGIEVGHIF G KYS M AT G DGK + Sbjct: 380 PLPEVADLRNVVEGDPSPDGQGTLTIARGIEVGHIFQLGRKYSEAMKATVLGEDGKATVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG RVVAA IE HD +GI WP +APF+++L+ +K R+A EK+YA Sbjct: 440 TMGCYGIGVSRVVAAAIEQHHDERGICWPAPIAPFEVALLPMKLGKSYRVREATEKLYAE 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD + G FA +L+G P +++VG K + D +VE K R + + + Sbjct: 500 LQAAGIDVLLDDRDARPGFMFADMELIGIPHRIVVGDKGLDDGQVEYKGRADAEMQLIPI 559 Query: 432 EEVINYASHRF 442 + ++ + R Sbjct: 560 DTIVEFVRERL 570 >gi|295696152|ref|YP_003589390.1| prolyl-tRNA synthetase [Bacillus tusciae DSM 2912] gi|295411754|gb|ADG06246.1| prolyl-tRNA synthetase [Bacillus tusciae DSM 2912] Length = 567 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 122/225 (54%), Positives = 165/225 (73%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+ L+E P +AE+ SH+LMLR GMI Q G+YS+LPLG + L + AI+REE Sbjct: 1 MRQSHFFVQTLREVPAEAEVPSHRLMLRAGMIRQVVSGVYSYLPLGYRVLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q A LW ESGR+D YGKE+LR DR+ + ++ GPTHEEV+TD+ R+ Sbjct: 61 MDRAGAQEVLLPAVQPASLWQESGRWDDYGKELLRFEDRHQRMLVLGPTHEEVITDLVRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP T YQIQ KFRDE+RPRFGVMR+REF+MKDAYSFD+ EG SY M+ + Sbjct: 121 EVRSYRQLPMTLYQIQTKFRDEVRPRFGVMRAREFIMKDAYSFDVDEEGLDRSYRAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGETQVFCS 224 Y +IF R GL+ ++A+ G IGG+ SHEF+VL++ GE + Sbjct: 181 YEQIFRRCGLEFRVVQADPGAIGGEGGSHEFMVLSEVGEDTILVC 225 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 72/159 (45%), Positives = 98/159 (61%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F GTKYS +SA+F G V MG YGIG R++AA +E HD KGI+ Sbjct: 403 RGIEVGHVFKLGTKYSEALSASFLDERGVQRPVIMGCYGIGVSRLIAAAVEQHHDDKGIM 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP +APF + ++ + D RDA E++ RL G +V DD E+ G +F ADL+G Sbjct: 463 WPMPIAPFHVHVLPVNLKDAAQRDAAEQLCTRLEDAGIEVLLDDRDERPGVKFNDADLMG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 P+Q+IVG K +S+ VE+K R TG +S +E + A Sbjct: 523 IPIQLIVG-KRISEGLVEMKRRKTGEVTLLSPDEAVRAA 560 >gi|52308170|gb|AAU38670.1| ProS protein [Mannheimia succiniciproducens MBEL55E] Length = 589 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 122/226 (53%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L+ V IIREE Sbjct: 19 MRTSKYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPSGIRVLEKVKNIIREE 78 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 79 MNKSGAIEVLMPVVQPAELWQESGRWEQYGLELLRFNDRGNRDFVLGPTHEEVITDLVRR 138 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 139 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTKESLQATYDVMYQT 198 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + Sbjct: 199 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE 244 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 111/182 (60%), Gaps = 4/182 (2%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K + RGIEVGHIF G KYS M+AT +G DGK + MG Y Sbjct: 401 ADLRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGQKYSEAMNATVQGEDGKPLVMTMGCY 460 Query: 318 GIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAHDQVCRDA-CEKIYARLSKV 375 GIG RVVA+ IE HD +GIIWP D++APF ++++ + H A E++Y L Sbjct: 461 GIGVTRVVASAIEQHHDERGIIWPSDAIAPFTVAIVPMNMHKSESVQAYAEELYQTLLAQ 520 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V +DD E+ G FA +L+G P VI+G K + + ++E K+R T ++ ++ ++++ Sbjct: 521 GVEVIFDDRKERPGVMFADMELIGVPHMVIIGEKNLENGEIEYKNRRTSEKQMIAKDQLL 580 Query: 436 NY 437 ++ Sbjct: 581 DF 582 >gi|237807601|ref|YP_002892041.1| prolyl-tRNA synthetase [Tolumonas auensis DSM 9187] gi|259511628|sp|C4LBX6|SYP_TOLAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|237499862|gb|ACQ92455.1| prolyl-tRNA synthetase [Tolumonas auensis DSM 9187] Length = 574 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 120/218 (55%), Positives = 156/218 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V AI+REE Sbjct: 1 MRTSQYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLHKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+S+P +Q A+LW ESGR++ YG E+ RL DR+++ + GPTHEEV+T + R Sbjct: 61 MNKAGAIEVSMPVVQPAELWQESGRWEQYGPELCRLTDRHNRPFVLGPTHEEVVTALVRY 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REF MKDAYSF + E +Y KM + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFTMKDAYSFHMNKESLIETYGKMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y IF R+GL P+ A++G IGG SHEF VLA++GE Sbjct: 181 YCNIFSRMGLDFRPVLADTGSIGGTGSHEFHVLANSGE 218 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 99/157 (63%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M+AT GK ++MG YGIG RVVAA IE + D +GII Sbjct: 409 RGIEVGHIFQLGTKYSEAMNATVLNEAGKATVMEMGCYGIGVTRVVAAAIEQNFDDRGII 468 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 W DS+APF++ +I + H + ++ E+ Y L G +V DD E+ G FA +L+ Sbjct: 469 WTDSIAPFQVVIIPMNMHKSERVQELAERFYNELQAAGVEVLLDDRKERPGVMFADMELI 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P +++G + + + VE K+R +G + +++++E+I Sbjct: 529 GIPHSIVIGDRSIDNGVVEYKYRRSGDKTEVAIDEII 565 >gi|148826625|ref|YP_001291378.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE] gi|166980127|sp|A5UDZ4|SYP_HAEIE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148716785|gb|ABQ98995.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE] Length = 572 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 132/275 (48%), Positives = 178/275 (64%), Gaps = 10/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPE 273 + +++ + AP A + D N K + L E Sbjct: 237 EAVAIG----ERQAPTAEMTLVDTPNAKTINELVE 267 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 405 RGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDDRGII 464 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 465 WPSDEIAPFTVAIVPMNMHKSESVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P V++G K + + ++E K+R +G +E +S +++++ + + N Sbjct: 525 IGVPHMVVIGEKNLDNGEIEYKNRRSGEKEMISKDKLLSVLNEKLGN 571 >gi|268590504|ref|ZP_06124725.1| hypothetical protein PROVRETT_06701 [Providencia rettgeri DSM 1131] gi|291314090|gb|EFE54543.1| proline--tRNA ligase [Providencia rettgeri DSM 1131] Length = 572 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 121/226 (53%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y WLP G + L V I+REE Sbjct: 1 MRTSKYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYDWLPTGVRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MENAGAIEVSLPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 EITSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+G ++A++G IGG SHEF VLA GE V S + Sbjct: 181 YSKIFTRIGFDFRAVQADTGSIGGSASHEFQVLAKNGEDDVIFSTE 226 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K V RGIEVGHIF GTKYS M A+ + DG + V MG YG Sbjct: 386 DLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKASVQNEDGHNQIVTMGCYG 445 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGC 377 IG R+VAA IE SHD +GIIWPD++APF+++++ + H ++ EK+YA L G Sbjct: 446 IGVTRIVAAAIEQSHDDRGIIWPDAIAPFQVAILPMNMHKSYRVKEVAEKLYADLKANGI 505 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV +DD E+ G FA +L+G P +++G + + ++++E K R + +E + LE VI++ Sbjct: 506 DVIFDDRKERPGVMFADMELIGVPYTIVIGDRNLDNNQIEYKSRRSDDKELVGLENVISF 565 >gi|292489201|ref|YP_003532088.1| prolyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|292898564|ref|YP_003537933.1| prolyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291198412|emb|CBJ45519.1| prolyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291554635|emb|CBA22316.1| Prolyl-tRNA synthetase [Erwinia amylovora CFBP1430] Length = 572 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 162/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LRL DR+D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M + Sbjct: 121 ELSSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQGSLQETYDAMHRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL ++A++G IGG+ SHEF VLA +GE + S + Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSSE 226 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PLPRIADIRNVVEGDASPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQIL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIW ++APF+++++ + ++ E +Y + Sbjct: 440 TMGCYGIGITRIVAAAIEQNHDERGIIWSPALAPFQVAILPMNMQKSFRVKELAEALYHQ 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P ++VG + + +VE K R G + + Sbjct: 500 LRAKGIDVILDDRKERPGVMFADMELIGVPHTIVVGERHLDSEEVEYKSRRAGEKRMIKT 559 Query: 432 EEVINY 437 E+I++ Sbjct: 560 NEIIDF 565 >gi|73542636|ref|YP_297156.1| prolyl-tRNA synthetase [Ralstonia eutropha JMP134] gi|114152236|sp|Q46X21|SYP_RALEJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|72120049|gb|AAZ62312.1| Prolyl-tRNA synthetase, bacterial [Ralstonia eutropha JMP134] Length = 573 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 124/224 (55%), Positives = 162/224 (72%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYNYMPVGLRVIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+S+P +Q A+LW E+GR+D G E+LRL DR+++ PT EEV+TDI RS Sbjct: 61 MNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKDRHERDFAVQPTSEEVVTDIARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY M+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAEGLKKSYENMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y+RIF R GL+ + A++G IGG SHEF V+ADTGE V+C Sbjct: 181 YVRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYC 224 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 381 PEPIVADLRNVVAGDASPDGKGTLEICRGIEVGHVFMLGTRYSESMNATFLDENGKTQPM 440 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE + D +GIIWP ++APF++ + + + + ++I+A Sbjct: 441 QMGCYGIGVTRILGAAIEQNFDERGIIWPAAIAPFEVVVCPVGYDRSEAVKAEADRIHAE 500 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P +V+VG + + + KVE + R +++ Sbjct: 501 LLAAGVDVIIDDRGERPGVMFADWELIGVPHRVVVGDRGLKEGKVEYQGRRDAQATQVAV 560 Query: 432 EEVINY 437 +V+ + Sbjct: 561 ADVVGH 566 >gi|312173361|emb|CBX81615.1| Prolyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158] Length = 572 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 162/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LRL DR+D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M + Sbjct: 121 ELSSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQGSLQETYDAMHRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL ++A++G IGG+ SHEF VLA +GE + S + Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSSE 226 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PLPRIADIRNVVEGDASPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQIL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIW ++APF+++++ + ++ E +Y + Sbjct: 440 TMGCYGIGITRIVAAAIEQNHDERGIIWSPALAPFQVAILPMNMQKSFRVKELAEALYHQ 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P ++VG + + +VE K R G + + Sbjct: 500 LRAKGIDVILDDRKERPGVMFADMELIGVPHTIVVGERHLDSEEVEYKSRRAGEKRMIKT 559 Query: 432 EEVINY 437 E+I++ Sbjct: 560 NEIIDF 565 >gi|293390782|ref|ZP_06635116.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951316|gb|EFE01435.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 571 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 121/226 (53%), Positives = 159/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P +A + SH+LMLR GMI + G+Y+WLP G + L V IIR+E Sbjct: 1 MRTSKYLLSTLKETPAEAAVVSHQLMLRAGMIRPLASGLYNWLPTGLRVLKKVENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKSGAIEVEMPVVQPAELWQESGRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYRQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHTSKESLQETYDVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF RLGL ++A++G IGG SHEF VLA++GE V S + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIFSTE 226 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 112/183 (61%), Gaps = 4/183 (2%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF G KYS M+AT +G DG+ V MG Sbjct: 382 VADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGDKYSQAMNATVQGEDGRPMVVTMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG RVVAA IE HD +GIIWP D++APF ++++ + + + + E +Y L Sbjct: 442 YGIGVTRVVAAAIEQHHDERGIIWPSDAIAPFTVAIVPMNMYKSESVQQFAEDLYRTLQA 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ ++ ++ Sbjct: 502 QGVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKAQL 561 Query: 435 INY 437 +++ Sbjct: 562 LDF 564 >gi|261867437|ref|YP_003255359.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412769|gb|ACX82140.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 571 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 121/226 (53%), Positives = 159/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P +A + SH+LMLR GMI + G+Y+WLP G + L V IIR+E Sbjct: 1 MRTSKYLLSTLKETPAEAAVVSHQLMLRAGMIRPLASGLYNWLPTGLRVLKKVENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKSGAIEVEMPVVQPAELWQESGRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYRQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHTSKESLQETYDVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF RLGL ++A++G IGG SHEF VLA++GE V S + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIFSTE 226 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 71/182 (39%), Positives = 112/182 (61%), Gaps = 4/182 (2%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K + RGIEVGHIF G KYS M+AT +G DG+ V MG Y Sbjct: 383 ADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGDKYSQTMNATVQGEDGRPMVVTMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 GIG RVVAA IE HD +GIIWP D++APF ++++ + + + + E +Y L Sbjct: 443 GIGVTRVVAAAIEQHHDERGIIWPSDAIAPFSVAIVPMNMYKSESVQQFAEDLYRTLQAQ 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ ++ +++ Sbjct: 503 GVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKAQLL 562 Query: 436 NY 437 ++ Sbjct: 563 DF 564 >gi|308048689|ref|YP_003912255.1| prolyl-tRNA synthetase [Ferrimonas balearica DSM 9799] gi|307630879|gb|ADN75181.1| prolyl-tRNA synthetase [Ferrimonas balearica DSM 9799] Length = 570 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 122/226 (53%), Positives = 157/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + ++E P DAEI SH+LM+R GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQTLISTMKETPSDAEIVSHQLMMRAGMIRKLAAGLYTWLPSGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E +P +Q ADLW E+GR+D G EM RL DR+D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRAGAVETLMPVVQPADLWQETGRWDDMGAEMARLKDRHDRDFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFGVMR+REFLMKDAYSF L E +Y M+ + Sbjct: 121 EIKSYKQLPINLYQIQTKFRDERRPRFGVMRAREFLMKDAYSFHLDQETMDETYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RI R+GL P+ A++G IGG SHEF VLA +GE + S + Sbjct: 181 YCRILERMGLAYRPVLADTGAIGGSHSHEFQVLAQSGEDAIAYSTE 226 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 68/166 (40%), Positives = 108/166 (65%), Gaps = 1/166 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGHIF GTKYS M+AT +GK + MG YG+G R+VAA IE +HD +GI Sbjct: 405 ARGIEVGHIFQLGTKYSESMNATVLDPNGKATPLIMGCYGVGVSRIVAAAIEQNHDDRGI 464 Query: 339 IWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWPD++AP++++++ + H + EK+YA L+ G +V +DD E+ G FA +L Sbjct: 465 IWPDAIAPYQVAILPMNMHKSHRVAELAEKLYAELTAAGIEVLFDDRKERPGVMFADHEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +G P +++G + + D VE K R TG + ++++++V+ + +F+ Sbjct: 525 IGIPHTIVIGDRGIDDGNVEYKVRKTGEKSELAIDQVVEFFKGKFA 570 >gi|148827919|ref|YP_001292672.1| prolyl-tRNA synthetase [Haemophilus influenzae PittGG] gi|166980128|sp|A5UHN3|SYP_HAEIG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148719161|gb|ABR00289.1| prolyl-tRNA synthetase [Haemophilus influenzae PittGG] Length = 572 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 134/275 (48%), Positives = 176/275 (64%), Gaps = 10/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPE 273 + I++ + AP A D N K L E Sbjct: 237 EAIAIG----ERQAPTAEMCLVDTPNAKTIAELVE 267 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 405 RGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGII 464 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 465 WPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P V++G K + + ++E K+R TG +E +S +++++ + + N Sbjct: 525 IGIPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|85059898|ref|YP_455600.1| prolyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans'] gi|114152253|sp|Q2NRN0|SYP_SODGM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|84780418|dbj|BAE75195.1| prolyl-tRNA synthase [Sodalis glossinidius str. 'morsitans'] Length = 574 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 122/224 (54%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+YSWLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKEVPADAEVVSHQLMLRAGMIRKLASGLYSWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE+S+P +Q ADLW ESGR+ YG E+LR DR +A + GPTHEEV+TD+ R+ Sbjct: 61 MDNAGAIEVSMPVVQPADLWQESGRWVQYGPELLRFTDRGARAFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTSQASLQATYDAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R+GL+ ++A++G IGG SHEF VLA +GE + S Sbjct: 181 YSAIFTRMGLEFRAVQADTGSIGGSASHEFQVLAGSGEDDIVFS 224 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 101/159 (63%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M AT +G DG++ + MG YGIG RVV A IE +HD +GI+ Sbjct: 407 RGIEVGHIFQLGTKYSEAMKATVQGEDGRNQTLTMGCYGIGITRVVVAAIEQNHDDRGIL 466 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP+++APF ++++ + H ++ E +Y +L G DV DD E+ G FA +L+ Sbjct: 467 WPETLAPFNVAILPMNMHKSFRVKEVAEDLYQQLQARGIDVLLDDRKERPGVMFADMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P Q+++G + + ++E K+R +G + + L ++++ Sbjct: 527 GVPHQLVIGDRNLDTEEIEYKNRRSGEKRMIKLSAIVDF 565 >gi|328954064|ref|YP_004371398.1| Prolyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328454388|gb|AEB10217.1| Prolyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 573 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 122/221 (55%), Positives = 156/221 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK LP L+E P +AE SH+L+LR GMI + + GIY +LPLG L V AI+REE Sbjct: 1 MYYSKMLLPTLKETPAEAETVSHQLLLRAGMIRKLTSGIYDYLPLGLMVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ +P +Q A+LW ESGR+ YGKE+LR DR+D+ +GPTHEEV+TD+ R Sbjct: 61 MNCAGAQELLLPAVQPAELWQESGRWQIYGKELLRFQDRHDRDYCFGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFG++R REF+MKD YSFD+ G+ +Y M+ + Sbjct: 121 EVHSYRQLPLNLYQIQTKFRDEIRPRFGLIRGREFIMKDGYSFDIDEAGADQTYRAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R GL+ + A+SGPIGG SHEF+VLA+TGE V Sbjct: 181 YTRIFSRCGLRFKTVEADSGPIGGSFSHEFMVLAETGEDVV 221 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 95/158 (60%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F G KYS + ATF G++ Y+ MG YGIG R+VAA IE +HD GII Sbjct: 403 RGIEVGHVFKLGYKYSKALKATFLDDQGREQYMFMGCYGIGVSRIVAAAIEQNHDLDGII 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +APF++ L+ I A+D ++Y + G +V +DD E+ G +F DLLG Sbjct: 463 FPMPLAPFQVLLVPIAANDVDTMAVASRLYQEIRAAGIEVLFDDRNERPGIKFKDGDLLG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 P++V++G K ++ E++ R + + + L ++ Y Sbjct: 523 IPVRVVLGPKTLAQGAAEVRQRRSRAVQLIPLASLVAY 560 >gi|237746898|ref|ZP_04577378.1| prolyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] gi|229378249|gb|EEO28340.1| prolyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] Length = 578 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 126/226 (55%), Positives = 162/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + + IIREE Sbjct: 1 MRASQFFISTLKEAPADAEIISHKLMVRAGMIRRLGSGIYAYMPMGLRVIHKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR+ YG E+LR+ DR+D+ I PT EEV+TDI R+ Sbjct: 61 MNRAGAVELLMPLVQPAELWQETGRWQKYGPELLRVKDRHDRDFIIQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G K SY MF + Sbjct: 121 VIKSYRQLPINFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDVAGLKKSYQVMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y++IF R GLK P+ A++G IGG SHEF V+ADTGE + S+D Sbjct: 181 YIKIFTRFGLKFRPVAADNGAIGGSGSHEFHVIADTGEDALVYSRD 226 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/273 (31%), Positives = 137/273 (50%), Gaps = 22/273 (8%) Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV---FCSKDFMDFPIPS 234 F S I H LG S GP+G + + AD T + C + D Sbjct: 321 FASESEIVHYLGCPS----GYLGPVGLSERTDIALYADHAVTVMSDFICGANEKDMHYTG 376 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGT 292 N + D + L S V +D N D P+ K A RGIEVGH+F GT Sbjct: 377 VNWERD--VPLPSTV----------ADFRNVVEGDPSPDGKGTLAIQRGIEVGHVFQLGT 424 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 +YS M AT+ +GK +QMG YGIG R++ A IE ++D +GIIWP S+APF++ L Sbjct: 425 RYSEDMHATYLDENGKPQLMQMGCYGIGVTRIMGAAIEQNNDERGIIWPVSIAPFEVVLC 484 Query: 353 NIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + ++ R+ +K+Y L G DV DD GE+ G F+ +L+G P ++++G + + Sbjct: 485 PLGYDRSEMVRNTADKLYGTLKNAGLDVLMDDRGERPGVMFSDWELIGIPHRIVIGERGL 544 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + K+E + R ++++++ N+ + ++ Sbjct: 545 KEGKLEYQGRRDKEATAVAIDDMANFIKDKLAS 577 >gi|88798124|ref|ZP_01113711.1| prolyl-tRNA synthetase [Reinekea sp. MED297] gi|88779321|gb|EAR10509.1| prolyl-tRNA synthetase [Reinekea sp. MED297] Length = 573 Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 121/226 (53%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L ++E P DA I SHKLMLR G++ + + G+Y+WLP G++ L+ + IIREE Sbjct: 1 MRASRYLLATVKETPADAVIVSHKLMLRAGLVRKLASGLYNWLPTGRRVLNKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ +PT+Q A+LW ESGR D +ML++ DR+ + +YGPTHEEV+TDI R+ Sbjct: 61 LDRSGAQEVLMPTIQPAELWEESGRIDKMEGQMLKMQDRHQRDFVYGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE RPRFGVMRSREF+MKD YSF + E Y+ M+ + Sbjct: 121 ELTSYKQLPMNFYQIQNKFRDEFRPRFGVMRSREFVMKDGYSFHVDQECLNKEYDNMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P+ A++G +GG SHEF VLAD+GE + S D Sbjct: 181 YCRIFDRLGLDYRPVLADTGAMGGSASHEFQVLADSGEDYIVYSTD 226 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 99/165 (60%), Gaps = 3/165 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G YS + A +GK +QMG YGIG R+VAA IE +HD GII Sbjct: 407 KGIEVGHIFQLGDTYSKSLKAEVLDQNGKSQAMQMGCYGIGVTRIVAAAIEQNHDENGII 466 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQI--GSQFAVAD 396 WPD++APF + ++ + AH + EK+YA L G DV DD ++ G +FA + Sbjct: 467 WPDAIAPFHVGIVPLNAHKSPEVMEVAEKLYADLQAAGYDVLLDDRDKKTSPGVKFADME 526 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 L+G P +++V + ++D KVE K R +E+++L +++ + + Sbjct: 527 LVGVPHRIVVSDRGLADGKVEYKARRASDKEEIALTDILAHIQQQ 571 >gi|237749052|ref|ZP_04579532.1| prolyl-tRNA synthetase [Oxalobacter formigenes OXCC13] gi|229380414|gb|EEO30505.1| prolyl-tRNA synthetase [Oxalobacter formigenes OXCC13] Length = 587 Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 125/226 (55%), Positives = 164/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SHKLM+RTGMI + GIY+++P+G + + + IIREE Sbjct: 9 MRASQFFISTLKEAPADAEIISHKLMVRTGMIRRLGSGIYAYMPMGLRVIHKIENIIREE 68 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR+ YG E+LR+ DR+D+ I PT EEV+TDI R+ Sbjct: 69 MNRAGAVELLMPLVQPAELWQETGRWQKYGPELLRIKDRHDRDFIIQPTSEEVITDIARN 128 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD +G K SY MF + Sbjct: 129 VIKSYRQLPINFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDVDGLKKSYQIMFDA 188 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y++IF R GLK P+ A++G IGG SHEF V+A+TGE + S++ Sbjct: 189 YVKIFTRFGLKFRPVAADNGAIGGSGSHEFHVIAETGEDALVYSRE 234 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/250 (33%), Positives = 125/250 (50%), Gaps = 22/250 (8%) Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV---FCSKDFMDFPIPS 234 F S I H LG + GPIG + + + AD T + C + D Sbjct: 329 FASESEIIHHLGCPA----GYLGPIGLEKREDIALYADHAVTVMSDFICGANEKDMHFTG 384 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGT 292 N + D + N +D N D P+ K A RGIEVGH+F GT Sbjct: 385 VNWERDLPLPEN------------IADFRNVVEGDPSPDGKGTLAIQRGIEVGHVFQLGT 432 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 +YS M+A++ +GK +QMG YGIG R+V A IE ++D KGIIWP S+APF++ L Sbjct: 433 RYSEDMNASYLDENGKPQLMQMGCYGIGVTRIVGAAIEQNNDDKGIIWPTSIAPFEVVLC 492 Query: 353 NIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + +++Y L + G DV DD GE+ G F+ +L+G P ++++G + + Sbjct: 493 PLGYDRSEAVKKTADELYESLKQSGIDVIMDDRGERPGVMFSDWELIGVPHRIVIGDRGL 552 Query: 412 SDSKVEIKHR 421 D K+E + R Sbjct: 553 KDGKLEYQGR 562 >gi|221133881|ref|ZP_03560186.1| prolyl-tRNA synthetase [Glaciecola sp. HTCC2999] Length = 570 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 117/221 (52%), Positives = 163/221 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR+GM+ + + G+Y++LP G + L+ V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVVSHQLMLRSGMVRKVASGLYNYLPTGLRVLNKVANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW ESGR++ YG E+LR+ DR+ + + GPTHEEV+T + R+ Sbjct: 61 MNKAGAIEIQMPVVQPADLWEESGRWEEYGPELLRIKDRHQRDFVLGPTHEEVVTALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REFLMKDAYSF L+ + + +Y+KMF + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGIMRGREFLMKDAYSFHLSQDCLQTTYDKMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y +F R+GL+ P+ A++G IGG SHEF VLAD+GE + Sbjct: 181 YCNVFERIGLEYRPVIADNGSIGGSGSHEFHVLADSGEDDI 221 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 95/159 (59%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M+ GK + MG YGIG R++AA IE +HD GI Sbjct: 408 RGIEVGHIFQLGNKYSQAMNCGVLTETGKHETLTMGCYGIGVSRIMAAAIEQNHDKYGIK 467 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF I++I + H ++ EK+Y +G +V +DD E+ G F +L+ Sbjct: 468 WPDAIAPFTIAIIPMNMHKSHRIKEVAEKLYEECLALGVEVLFDDRKERPGVMFNDMELI 527 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P +++G + + + +VE K+R TG ++ +++ ++ + Sbjct: 528 GVPHSIVIGERNLDNQEVEYKNRRTGEKKMLNIADLSEF 566 >gi|297568238|ref|YP_003689582.1| prolyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] gi|296924153|gb|ADH84963.1| prolyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] Length = 576 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 123/225 (54%), Positives = 159/225 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ LP L+E+P +AE+ SHKLMLR G I + + G+YS+LPLG A+ V I+REE Sbjct: 1 MRFSQLLLPTLKEDPAEAEVISHKLMLRGGFIRKLTAGVYSYLPLGLAAIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q ADLW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R Sbjct: 61 MNRAGAQELLLPMVQPADLWRESGRWEKYGPELLRFKDRHQRESCLGPTHEEVITDLVRM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKD YSFDL G++ +Y KM+ + Sbjct: 121 NIHSYRQLPVNLYQVQTKFRDEIRPRFGLMRGREFIMKDGYSFDLDEAGAELTYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF R GL + A++G IGG SHEF+VLA TGE V + Sbjct: 181 YQRIFSRCGLAFRAVEADTGTIGGSFSHEFMVLAATGEDVVVICQ 225 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/145 (44%), Positives = 93/145 (64%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS ++ATF G+ + MG +GIG R VAA IE +HD G+I Sbjct: 402 RGIEVGHIFKLGTNYSEALNATFLDDQGQSRHFVMGCFGIGVSRTVAAAIEQNHDRDGMI 461 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +APF++ L+N+ D+V E++Y L+ G +V DD E+ GS+F ADL+G Sbjct: 462 FPLPIAPFQVILLNLTPKDEVISAEAERLYQALTADGIEVLLDDRDERPGSKFKDADLIG 521 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTG 424 P++++VG +F +D +EI+ R G Sbjct: 522 IPIRLMVGKRFKNDGLLEIRTRADG 546 >gi|117919846|ref|YP_869038.1| prolyl-tRNA synthetase [Shewanella sp. ANA-3] gi|152016600|sp|A0KV13|SYP_SHESA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|117612178|gb|ABK47632.1| prolyl-tRNA synthetase [Shewanella sp. ANA-3] Length = 570 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDVDTMNETYEAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y I R+GL P+ A++G IGG +SHEF VLA +GE + S Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYS 224 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + H D E++Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS VG DV DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LSAVGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDVPF 558 Query: 432 EEVINY 437 ++++++ Sbjct: 559 DQIVDF 564 >gi|85711988|ref|ZP_01043042.1| Prolyl-tRNA synthetase [Idiomarina baltica OS145] gi|85694174|gb|EAQ32118.1| Prolyl-tRNA synthetase [Idiomarina baltica OS145] Length = 569 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+W P G + L V ++REE Sbjct: 1 MRSSQYLLSTLKETPSDAEIVSHQLMLRAGMIRKVASGLYTWTPTGLRVLKKVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R A+E+ +P +Q ADLW ESGR++ YG E+LR+ DR+++ + GPTHEE+++++ R Sbjct: 61 MERINALEILMPMVQPADLWQESGRWEDYGPELLRIKDRHERDFLLGPTHEEIISELVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T +QIQ KFRDE+RPRFGVMR+REF+MKDAYSF LT E + +Y++M+ + Sbjct: 121 EVSSYKQLPLTLFQIQTKFRDEIRPRFGVMRAREFMMKDAYSFHLTDESLQQAYDEMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF RLGL P+ A++G IGG SHEF VLA +GE + S Sbjct: 181 YCRIFQRLGLDFRPVIADTGSIGGHASHEFHVLAGSGEDAIAFS 224 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 3/194 (1%) Query: 254 APYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A +A D+ N D P + ARGIEVGHIF G KYS M GK Sbjct: 375 AEISAVEDIRNVVAGDPSPCGQGTLQIARGIEVGHIFQLGKKYSNAMKVGVLSETGKHET 434 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYA 370 + MG YGIG RVVAA IE HD +GI WP+ +APF+++++ + H + ++Y Sbjct: 435 LTMGCYGIGVSRVVAAAIEQFHDDRGINWPNELAPFEVAIVPMNMHKSARVQKVANELYQ 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G DV +DD E+ G F +L+G P Q+++G + + + VE + R ++ M Sbjct: 495 QLRDAGFDVLFDDRKERPGVMFTDMELIGVPHQIVIGERNLDEEMVEYQSRSDRDKQKMP 554 Query: 431 LEEVINYASHRFSN 444 + V+ + + N Sbjct: 555 INSVLEFLNQTLRN 568 >gi|113969687|ref|YP_733480.1| prolyl-tRNA synthetase [Shewanella sp. MR-4] gi|123130574|sp|Q0HKJ4|SYP_SHESM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|113884371|gb|ABI38423.1| prolyl-tRNA synthetase [Shewanella sp. MR-4] Length = 570 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDVDTMNETYEAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y I R+GL P+ A++G IGG +SHEF VLA +GE + S Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYS 224 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 107/186 (57%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + H D E++Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS G DV DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LSAAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDVPF 558 Query: 432 EEVINY 437 ++++++ Sbjct: 559 DQIVDF 564 >gi|16272670|ref|NP_438888.1| prolyl-tRNA synthetase [Haemophilus influenzae Rd KW20] gi|260579822|ref|ZP_05847652.1| prolyl-tRNA synthetase [Haemophilus influenzae RdAW] gi|1174537|sp|P43830|SYP_HAEIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|1573733|gb|AAC22388.1| prolyl-tRNA synthetase (proS) [Haemophilus influenzae Rd KW20] gi|260093106|gb|EEW77039.1| prolyl-tRNA synthetase [Haemophilus influenzae RdAW] Length = 572 Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE 226 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 405 RGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGII 464 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 465 WPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P V++G K + + ++E K+R TG +E +S +++++ + + N Sbjct: 525 IGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|114046916|ref|YP_737466.1| prolyl-tRNA synthetase [Shewanella sp. MR-7] gi|122944801|sp|Q0HWU6|SYP_SHESR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|113888358|gb|ABI42409.1| prolyl-tRNA synthetase [Shewanella sp. MR-7] Length = 570 Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDVDTMNETYEAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y I R+GL P+ A++G IGG +SHEF VLA +GE + S Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYS 224 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 107/186 (57%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + H D E++Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS G DV DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LSAAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDVPF 558 Query: 432 EEVINY 437 ++++++ Sbjct: 559 DQIVDF 564 >gi|319775327|ref|YP_004137815.1| prolyl-tRNA synthetase [Haemophilus influenzae F3047] gi|319897767|ref|YP_004135964.1| prolyl-tRNA synthetase [Haemophilus influenzae F3031] gi|329122677|ref|ZP_08251255.1| proline--tRNA ligase [Haemophilus aegyptius ATCC 11116] gi|317433273|emb|CBY81648.1| prolyl-tRNA synthetase [Haemophilus influenzae F3031] gi|317449918|emb|CBY86130.1| prolyl-tRNA synthetase [Haemophilus influenzae F3047] gi|327472551|gb|EGF17981.1| proline--tRNA ligase [Haemophilus aegyptius ATCC 11116] Length = 572 Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE 226 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 405 RGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDDRGII 464 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 465 WPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P V++G K + + ++E K+R TG +E +S +++++ + + N Sbjct: 525 VGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|145630468|ref|ZP_01786248.1| frataxin-like protein [Haemophilus influenzae R3021] gi|144983858|gb|EDJ91300.1| frataxin-like protein [Haemophilus influenzae R3021] Length = 572 Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 121/226 (53%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE 226 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 405 RGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGII 464 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 465 WPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P V++G K + + ++E K+R TG +E +S +++++ + + N Sbjct: 525 IGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|315635289|ref|ZP_07890566.1| proline--tRNA ligase [Aggregatibacter segnis ATCC 33393] gi|315476035|gb|EFU66790.1| proline--tRNA ligase [Aggregatibacter segnis ATCC 33393] Length = 571 Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P +A I SH+LMLR GMI + G+Y+W+P G + L V IIREE Sbjct: 1 MRTSKYLLSTLKETPAEAAIVSHQLMLRAGMIRPLASGLYNWMPTGWRVLQKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ESGR+D YG E+LR DR +++ + GPT+EE +TD+ R Sbjct: 61 MNKSGAIEIKMPVVQPAELWQESGRWDQYGPELLRFTDRGERSFVIGPTNEEAITDLMRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP Y IQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y M+ + Sbjct: 121 EVTSYRQLPLNLYHIQTKFRDEVRPRFGVMRSREFIMKDAYSFHMDKESLQQTYEVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF RLGL ++A++G IGG SHEF VLA++GE V S + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIFSTE 226 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/183 (39%), Positives = 112/183 (61%), Gaps = 4/183 (2%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF G KYS M+AT +G DG+ V MG Sbjct: 382 VADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGDKYSNAMNATVQGEDGRPTVVTMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAHDQVCRDA-CEKIYARLSK 374 YGIG RVVAA IE HD +GIIWP D++APF ++++ + H A E++Y L Sbjct: 442 YGIGVTRVVAAAIEQHHDERGIIWPSDAMAPFTVAIVPMNMHKSESVQAFAEELYRTLLA 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD E+ G FA +L+G P V++G K +++ ++E K+R +G ++ ++ ++ Sbjct: 502 QGVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRSGEKQMIAKAQL 561 Query: 435 INY 437 I++ Sbjct: 562 IDF 564 >gi|145634860|ref|ZP_01790568.1| prolyl-tRNA synthetase [Haemophilus influenzae PittAA] gi|145268026|gb|EDK08022.1| prolyl-tRNA synthetase [Haemophilus influenzae PittAA] Length = 572 Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE 226 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 405 RGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGII 464 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 465 WPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P V++G K + + ++E K+R +G +E +S +++++ + + N Sbjct: 525 IGVPHMVVIGEKNLDNGEIEYKNRRSGEKEMISKDKLLSVLNEKLGN 571 >gi|145628390|ref|ZP_01784191.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|145638474|ref|ZP_01794084.1| prolyl-tRNA synthetase [Haemophilus influenzae PittII] gi|144980165|gb|EDJ89824.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|145272803|gb|EDK12710.1| prolyl-tRNA synthetase [Haemophilus influenzae PittII] gi|309751606|gb|ADO81590.1| Prolyl-tRNA synthetase [Haemophilus influenzae R2866] gi|309973773|gb|ADO96974.1| Prolyl-tRNA synthetase [Haemophilus influenzae R2846] Length = 572 Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 132/276 (47%), Positives = 176/276 (63%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + I++ + AP A D N K L E Sbjct: 237 EAIAIG----ERQAPTAEMCLVDTPNAKTIAELVEQ 268 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 405 RGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGII 464 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 465 WPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P V++G K + + ++E K+R TG +E +S +++++ + + N Sbjct: 525 IGVPHMVVIGEKNLENGEIEYKNRRTGEKEMISKDQLLSVLNEKLGN 571 >gi|312111641|ref|YP_003989957.1| prolyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] gi|311216742|gb|ADP75346.1| prolyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] Length = 567 Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G I Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQSFIPTLREVPADAEVKSHQLLLRAGFIRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ GPTHEE++T + R Sbjct: 61 MNRAGAVELLMPALQPAELWQQSGRWYSYGPELMRLKDRHERNFALGPTHEEMITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ+KFRDE RPRFG++R REF+MKDAYSF + E +YNKM+ + Sbjct: 121 EVKSYKRLPLTLYQIQVKFRDEKRPRFGLLRGREFIMKDAYSFHTSQESLDETYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG IGG +HEF+VL++ GE + S Sbjct: 181 YSNIFRRCGLNFRAVIADSGAIGGKDTHEFMVLSEIGEDTIAYS 224 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 99/158 (62%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS ++AT+ +G+ + MG YGIG R+VAA+ E D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEALNATYLDENGRSQTMIMGCYGIGVSRLVAAIAEQFADENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + LI A + R ++ Y +L + G +V +DD E+ G +FA +DL+ Sbjct: 463 VWPVAVAPFHVHLITANAKSEEQRQLADEWYEKLRQAGLEVLYDDRPERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P++V VG K + VE+K R TG ++ + E+I+ Sbjct: 523 GIPVRVTVG-KRAGEGVVEVKVRQTGESVEVPVHELID 559 >gi|254284280|ref|ZP_04959248.1| prolyl-tRNA synthetase [gamma proteobacterium NOR51-B] gi|219680483|gb|EED36832.1| prolyl-tRNA synthetase [gamma proteobacterium NOR51-B] Length = 564 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 122/221 (55%), Positives = 162/221 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DAEI SH+LMLR GMI + + GIY+W+PLG + L V A++REE Sbjct: 5 MRASQFPLFTLKETPSDAEIISHQLMLRAGMIRRIAAGIYTWMPLGLRVLRRVEAVVREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+++P +Q A+LW ESGR++ YG E+ RL DR+D+ GPTHEEV++ + RS Sbjct: 65 MNNAGALEITMPVVQPAELWQESGRWEQYGPELARLRDRHDREFCLGPTHEEVVSALARS 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y +M + Sbjct: 125 EIKSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHVDQASQEETYWRMHDA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF+RL L P+ A++G IGG+ SHEF VLAD+GE + Sbjct: 185 YSRIFNRLSLAFRPVEADTGSIGGNHSHEFHVLADSGEDAI 225 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 1/126 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIEVGHIF GTKYS M A +GK + MG YGIG R+VAA IE ++D GI Sbjct: 408 CRGIEVGHIFQLGTKYSEAMGAEVLDENGKSTAMAMGCYGIGITRIVAAAIEQNNDDNGI 467 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWP S+APF ++L+ + Q DA E +Y+ + G DVF DD ++ G +FA +L Sbjct: 468 IWPVSMAPFTVALVPLNMGKSQAVADATEDLYSACVEAGIDVFMDDRDQRPGVKFAEMEL 527 Query: 398 LGFPLQ 403 + P + Sbjct: 528 IASPFE 533 >gi|240947869|ref|ZP_04752309.1| prolyl-tRNA synthetase [Actinobacillus minor NM305] gi|240297831|gb|EER48267.1| prolyl-tRNA synthetase [Actinobacillus minor NM305] Length = 571 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 131/277 (47%), Positives = 174/277 (62%), Gaps = 19/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V I+REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFNDRGNRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP--------- 231 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVIFSTE-SDFAANIELAEAV 239 Query: 232 ------IPSEN---TDFDDIISLNSIVEQWTAPYAAT 259 P+ + D + ++N +VEQ+ P T Sbjct: 240 AVGERQAPTADMQLVDTPNAKTINELVEQFNLPIEKT 276 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/186 (40%), Positives = 112/186 (60%), Gaps = 4/186 (2%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T D+ N D P+ K V RGIEVGHIF G KYS M+AT +G DGK + MG Sbjct: 382 TFDLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGKKYSEAMNATVQGEDGKPLVMTMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG RVVAA IE HD +GIIWP D +APF ++++ + H + + E++Y L Sbjct: 442 YGIGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMHKSEKVQAFAEELYKTLKA 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD E+ G FA +L+G P V++G K + + ++E K+R TG ++ ++ E++ Sbjct: 502 QGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLENGEIEYKNRRTGEKQMIAKEQL 561 Query: 435 INYASH 440 + + + Sbjct: 562 LAFLAE 567 >gi|301169449|emb|CBW29049.1| prolyl-tRNA synthetase [Haemophilus influenzae 10810] Length = 572 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE 226 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 105/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M+AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 405 RGIEVGHIFQLGKKYSEAMNATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDDRGII 464 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 465 WPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P V++G K + + ++E K+R TG +E +S +++++ + + N Sbjct: 525 IGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|145632080|ref|ZP_01787815.1| frataxin-like protein [Haemophilus influenzae 3655] gi|144986987|gb|EDJ93517.1| frataxin-like protein [Haemophilus influenzae 3655] Length = 572 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE 226 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 405 RGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDDRGII 464 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 465 WPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P V++G K + + ++E K+R TG +E +S +++++ + + N Sbjct: 525 IGIPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|120598308|ref|YP_962882.1| prolyl-tRNA synthetase [Shewanella sp. W3-18-1] gi|152016601|sp|A1RI33|SYP_SHESW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120558401|gb|ABM24328.1| prolyl-tRNA synthetase [Shewanella sp. W3-18-1] Length = 571 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 123/243 (50%), Positives = 167/243 (68%), Gaps = 8/243 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y I R+GL P+ A++G IGG +SHEF VLA +GE + S + + P+ Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIEKAESPM 240 Query: 233 PSE 235 P+E Sbjct: 241 PTE 243 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + H D E++Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS G +V DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LSAAGIEVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPF 558 Query: 432 EEVINY 437 ++++++ Sbjct: 559 DQLVDF 564 >gi|331000280|ref|ZP_08323964.1| proline--tRNA ligase [Parasutterella excrementihominis YIT 11859] gi|329572446|gb|EGG54099.1| proline--tRNA ligase [Parasutterella excrementihominis YIT 11859] Length = 582 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 125/224 (55%), Positives = 161/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++F+ +E P DAEI S KLMLR GMI + + G+Y+++P+G ++L + I+REE Sbjct: 1 MRAKQFFISTQKEAPADAEIVSQKLMLRAGMIRKLAAGVYNYMPMGLRSLKKIERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +P +Q A+LW E+GR+ YG E+LR DR+D+ + PT EEV+TDI R Sbjct: 61 MDRAGAIELLMPIVQPAELWQETGRWQKYGSELLRFKDRHDRDFVLQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKS+R LP FYQIQ KFRDE RPRFGVMR R+F+MKDAYSFD T E + SY+KMF + Sbjct: 121 EIKSWRQLPVNFYQIQTKFRDERRPRFGVMRGRDFVMKDAYSFDRTAEDAGKSYDKMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF RLGL +RA+SG IGG S EF V+ADTGE VFC Sbjct: 181 YCRIFDRLGLVYRAVRADSGSIGGSRSQEFQVIADTGEDLIVFC 224 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 71/181 (39%), Positives = 105/181 (58%), Gaps = 3/181 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGH+F+ G KYS PM+AT+ +GK +QMG Sbjct: 393 VADIRNVVEGDVSPDGKGTLKMQRGIEVGHVFFLGDKYSAPMNATYLDENGKPQLLQMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R++ A IE HD KGIIWPDS+APF + + + + + A ++Y RL + Sbjct: 453 YGIGISRLLGAAIEQGHDDKGIIWPDSIAPFTVVICPVGYDKSEEVQKASNELYGRLREA 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA +L+G P +V +G + + + +VE HR E++ + E+ Sbjct: 513 GIDVILDDRGLRPGVMFADWELIGVPHRVTIGDRGLKNGEVEYAHRGDLQNENVPVTEIA 572 Query: 436 N 436 + Sbjct: 573 D 573 >gi|313901629|ref|ZP_07835066.1| prolyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] gi|313468110|gb|EFR63587.1| prolyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] Length = 586 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 162/224 (72%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++ +P L+++P +AEIASH+LMLR G+I + + GIY WLPLG++A+ V I+REE Sbjct: 1 MRWTRLLIPTLRDDPAEAEIASHRLMLRAGLIRRVTAGIYEWLPLGRRAVVKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G +E+ +P +Q A+LW E+GR+ YG+EM RL DR+ + GPTHEE++TD+ R+ Sbjct: 61 MNRKGGLEVGLPIVQPAELWRETGRWAQYGEEMWRLKDRHGREYCLGPTHEEIITDLVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ K+RDE+RPRFGVMR+REF+MKDAYSFD+ EG + SY M + Sbjct: 121 TVSSYRQLPLLLYQIQNKYRDEIRPRFGVMRAREFIMKDAYSFDVDAEGLERSYQAMDDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL P+ A+ G IGG +HEF+ LAD GE V+C Sbjct: 181 YRRIFSRCGLVFRPVAADPGAIGGSGTHEFMALADYGEALIVYC 224 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 74/158 (46%), Positives = 99/158 (62%), Gaps = 2/158 (1%) Query: 269 DSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D+ PE +ARGIEVG IF TKYS + TFK ADG++ + MG YGIG R VA Sbjct: 394 DACPECGTPMAAARGIEVGQIFKLWTKYSEALGCTFKDADGQERPMVMGCYGIGITRTVA 453 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 AVIE HD KGIIWP SVAP+ + ++ + + R A E++Y +L + G + DD E Sbjct: 454 AVIEQHHDEKGIIWPMSVAPYHVVVVPVNYAEPDQRQAAERVYGQLLEAGVEAVLDDRDE 513 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + G +F ADL+GFPL+V VG + + + KVE+ R TG Sbjct: 514 RPGVKFNDADLIGFPLRVTVGPRGLVEGKVEVVERATG 551 >gi|229845777|ref|ZP_04465889.1| prolyl-tRNA synthetase [Haemophilus influenzae 7P49H1] gi|229810781|gb|EEP46498.1| prolyl-tRNA synthetase [Haemophilus influenzae 7P49H1] Length = 572 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE 226 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS + AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 405 RGIEVGHIFQLGKKYSEAVKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDDRGII 464 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 465 WPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P V++G K + + ++E K+R TG +E +S +++++ + + N Sbjct: 525 IGIPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|146293614|ref|YP_001184038.1| prolyl-tRNA synthetase [Shewanella putrefaciens CN-32] gi|166980158|sp|A4Y8F6|SYP_SHEPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145565304|gb|ABP76239.1| prolyl-tRNA synthetase [Shewanella putrefaciens CN-32] Length = 571 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 123/243 (50%), Positives = 167/243 (68%), Gaps = 8/243 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y I R+GL P+ A++G IGG +SHEF VLA +GE + S + + P+ Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIEKAESPM 240 Query: 233 PSE 235 P+E Sbjct: 241 PTE 243 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + H D E++Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS G +V DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LSAAGIEVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPF 558 Query: 432 EEVINY 437 ++++++ Sbjct: 559 DQLVDF 564 >gi|319426918|gb|ADV54992.1| prolyl-tRNA synthetase [Shewanella putrefaciens 200] Length = 571 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 123/243 (50%), Positives = 167/243 (68%), Gaps = 8/243 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNEAYEAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y I R+GL P+ A++G IGG +SHEF VLA +GE + S + + P+ Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIEKAESPM 240 Query: 233 PSE 235 P+E Sbjct: 241 PTE 243 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + H D E++Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS G +V DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LSAAGIEVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPF 558 Query: 432 EEVINY 437 ++++++ Sbjct: 559 DQLVDF 564 >gi|251793646|ref|YP_003008376.1| prolyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] gi|247535043|gb|ACS98289.1| hypothetical protein NT05HA_1971 [Aggregatibacter aphrophilus NJ8700] Length = 571 Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L+E P +A + SH+LMLR GMI + G+Y+WLP G + L V IIR+E Sbjct: 1 MRTSKYLFSTLKETPAEAAVVSHQLMLRAGMIRPLASGLYNWLPTGLRVLKKVENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKSGAIEVEMPVVQPAELWQESGRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYRQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHTSKESLQETYDVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF RLGL ++A++G IGG SHEF VLA++GE V S + Sbjct: 181 YSNIFSRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIFSTE 226 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 113/183 (61%), Gaps = 4/183 (2%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF G KYS M+AT +G DG+ + MG Sbjct: 382 VADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGDKYSKAMNATVQGEDGRPMVLTMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG RVVAA IE HD +GIIWP D +APF ++++ + H + ++ E +Y L Sbjct: 442 YGIGVTRVVAAAIEQHHDERGIIWPCDEMAPFTVAIVPMNMHKSESVQEFAEDLYRTLLA 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ ++ +++ Sbjct: 502 QGVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQL 561 Query: 435 INY 437 +++ Sbjct: 562 LDF 564 >gi|295399847|ref|ZP_06809828.1| prolyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|294978250|gb|EFG53847.1| prolyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] Length = 567 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G I Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQSFIPTLREVPADAEVKSHQLLLRAGFIRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ GPTHEE++T + R Sbjct: 61 MNRAGAVELLMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFALGPTHEEMITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ+KFRDE RPRFG++R REF+MKDAYSF + E +YNKM+ + Sbjct: 121 EVKSYKRLPLTLYQIQVKFRDEKRPRFGLLRGREFIMKDAYSFHTSQESLDETYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG IGG +HEF+VL++ GE + S Sbjct: 181 YSNIFRRCGLNFRAVIADSGAIGGKDTHEFMVLSEIGEDTIAYS 224 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 99/158 (62%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS ++AT+ +G+ + MG YGIG R+VAA+ E D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEALNATYLDENGRSQTMIMGCYGIGVSRLVAAIAEQFADENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + LI A + R ++ Y +L + G +V +DD E+ G +FA +DL+ Sbjct: 463 VWPVAVAPFHVHLITANAKSEEQRQLADEWYEKLRQAGLEVLYDDRPERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P++V VG K + VE+K R TG ++ + E+I+ Sbjct: 523 GIPVRVTVG-KRAGEGVVEVKVRQTGESVEVPVHELID 559 >gi|303258207|ref|ZP_07344214.1| proline--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|302858960|gb|EFL82044.1| proline--tRNA ligase [Burkholderiales bacterium 1_1_47] Length = 582 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 125/224 (55%), Positives = 161/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++F+ +E P DAEI S KLMLR GMI + + G+Y+++P+G ++L + I+REE Sbjct: 1 MRAKQFFISTQKEAPADAEIVSQKLMLRAGMIRKLAAGVYNYMPMGLRSLKKIERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +P +Q A+LW E+GR+ YG E+LR DR+D+ + PT EEV+TDI R Sbjct: 61 MDRAGAIELLMPIVQPAELWQETGRWQKYGAELLRFKDRHDRDFVLQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKS+R LP FYQIQ KFRDE RPRFGVMR R+F+MKDAYSFD T E + SY+KMF + Sbjct: 121 EIKSWRQLPVNFYQIQTKFRDERRPRFGVMRGRDFVMKDAYSFDRTAEDAGKSYDKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF RLGL +RA+SG IGG S EF V+ADTGE VFC Sbjct: 181 YCRIFDRLGLVYRAVRADSGSIGGSRSQEFQVIADTGEDLIVFC 224 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 71/181 (39%), Positives = 105/181 (58%), Gaps = 3/181 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGH+F+ G KYS PM+AT+ +GK +QMG Sbjct: 393 VADIRNVVEGDVSPDGKGTLKMQRGIEVGHVFFLGDKYSAPMNATYLDENGKPQLLQMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R++ A IE HD KGIIWPDS+APF + + + + + A ++Y RL + Sbjct: 453 YGIGISRLLGAAIEQGHDDKGIIWPDSIAPFTVVICPVGYDKSEEVQKASNELYGRLREA 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA +L+G P +V +G + + + +VE HR E++ + E+ Sbjct: 513 GIDVILDDRGLRPGVMFADWELIGVPHRVTIGDRGLKNGEVEYAHRGDLQNENVPVSEIA 572 Query: 436 N 436 + Sbjct: 573 D 573 >gi|239826651|ref|YP_002949275.1| prolyl-tRNA synthetase [Geobacillus sp. WCH70] gi|259511599|sp|C5D9C3|SYP_GEOSW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|239806944|gb|ACS24009.1| prolyl-tRNA synthetase [Geobacillus sp. WCH70] Length = 567 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 163/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G I Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQSFIPTLREVPADAEVKSHQLLLRAGFIRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P LQ A+LW +SGR+ SYG E++RL DR+++ GPTHEE++T + R Sbjct: 61 MNRAGAIELLMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFALGPTHEEIITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP T YQIQ+KFRDE RPRFG++R REF+MKDAYSF + E +YNKM+ + Sbjct: 121 EVKTYKRLPLTLYQIQVKFRDEKRPRFGLLRGREFIMKDAYSFHTSQESLDETYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG IGG +HEF+VL++ GE + S Sbjct: 181 YSNIFRRCGLNFRAVIADSGAIGGKDTHEFMVLSEIGEDTIAYS 224 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 69/158 (43%), Positives = 105/158 (66%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+AT+ +G+ + MG YGIG R+VAA+ E D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSKAMNATYLDENGRSQTMIMGCYGIGVSRLVAAIAEQFADENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SVAPF + LI++ A ++ R ++ Y +L + G +V +DD E+ G +FA +DL+ Sbjct: 463 VWPASVAPFHVHLISVNAKNEEQRQLADEWYEKLGQAGFEVLYDDRPERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P++V VG K ++ VEIK R TG ++S++E+I+ Sbjct: 523 GIPIRVTVG-KRANEGIVEIKVRQTGESMEVSVDELID 559 >gi|171057265|ref|YP_001789614.1| prolyl-tRNA synthetase [Leptothrix cholodnii SP-6] gi|226701306|sp|B1XYW5|SYP_LEPCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|170774710|gb|ACB32849.1| prolyl-tRNA synthetase [Leptothrix cholodnii SP-6] Length = 581 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 161/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SH+LM+R GMI + GIY+++P+G + + V AIIREE Sbjct: 1 MKASQFFIATLKEAPADAEVKSHQLMMRAGMIKRLGAGIYNYMPMGLRVIRKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR+D G E+LR+ DR+D+ I PT EEV+TDI R Sbjct: 61 MNRAGAVELLMPVVQPAELWQETGRFDKMGPELLRVKDRHDRDFIIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD + SY+ MF + Sbjct: 121 ELRSYKQLPKNFYHIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAASAARSYDAMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL+ + A++G IGGDLSHEF V+ADTGE V+C Sbjct: 181 YKRIFDRFGLQYRAVAADTGAIGGDLSHEFQVIADTGEDAIVYC 224 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 83/252 (32%), Positives = 128/252 (50%), Gaps = 22/252 (8%) Query: 200 GPIGGDLSHEFIVLADTGETQV---FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 GPIG L V+AD Q+ C + +DF + N D Sbjct: 345 GPIG--LKKPVKVIADRTVAQMADFICGANEIDFHLTGINWGRD------------LPEP 390 Query: 257 AATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D P+ + V A RGIEVGH+F+ GTKYS M+AT+ +GK +++M Sbjct: 391 DAVADIRNVVEGDPSPDGQGVLAIQRGIEVGHVFFLGTKYSKAMNATYLDENGKPQFMEM 450 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC--RDACEKIYARL 372 G YGIG R++ A IE HD +GI+WPD++APF + + I +D+ + A + ++ L Sbjct: 451 GCYGIGVTRILGAAIEQKHDARGILWPDAIAPFTVVVCPI-GYDRSAEVKAAADALHDEL 509 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G DV DD GE+ G+ FA +L+G P +V++ + + +VE + R + Sbjct: 510 QAAGIDVMLDDRGERPGAMFADWELIGVPHRVVISDRGLKAGQVEYQGRCDEAASTVPAA 569 Query: 433 EVINYASHRFSN 444 EV + R + Sbjct: 570 EVAAFVKGRLRS 581 >gi|145637732|ref|ZP_01793384.1| prolyl-tRNA synthetase [Haemophilus influenzae PittHH] gi|145269081|gb|EDK09032.1| prolyl-tRNA synthetase [Haemophilus influenzae PittHH] Length = 572 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE 226 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 405 RGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGII 464 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 465 WPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P V++G K + + ++E K+R TG +E +S +++++ + + N Sbjct: 525 IGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|254491952|ref|ZP_05105130.1| prolyl-tRNA synthetase [Methylophaga thiooxidans DMS010] gi|224462767|gb|EEF79038.1| prolyl-tRNA synthetase [Methylophaga thiooxydans DMS010] Length = 569 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S + L+E P DAEI SH+LMLR G+I + + G+Y+WLP+G K L AIIR+E Sbjct: 1 MRASNLLISTLKETPADAEIVSHQLMLRAGLIRRLASGLYTWLPMGLKVLRKTEAIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ +P++Q ++LW ES R++ YG E+LR+ DR+ + YGPTHEEV+TD+ R Sbjct: 61 MDKAGAQEVLMPSVQPSELWQESQRWEKYGPELLRITDRHQREFCYGPTHEEVITDLVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE+RPRFG+MR+REFLMKDAYSF L + +Y+ MF + Sbjct: 121 EIRSYKQLPINFYQIQTKFRDEIRPRFGLMRAREFLMKDAYSFHLDHASLQQTYDDMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R+GL P++A++G IGG+ SHEF VLA +GE + S Sbjct: 181 YSRIFSRIGLDFRPVQADTGSIGGNASHEFHVLASSGEDAIAFS 224 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T+D+ N D P+ + ARGIEVGHIF G YS ++A GK + MG Sbjct: 382 TADLRNVVAGDPSPDGQGTLDIARGIEVGHIFQLGENYSSKLNAVVLNETGKSQVITMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GIIWP+++AP+++ L+ + AH V + E+IY +L Sbjct: 442 YGIGVSRVVAAAIEQNNDDRGIIWPEAIAPYQVVLVPVNAHKSVRVKQKAEEIYQQLQAA 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA +L+G P ++I+G + + + +E K R TG ++ +E VI Sbjct: 502 GIDVLLDDRGLRPGVAFADMELIGIPHRLILGERGLDNGMIEYKSRRTGEGDEFPIESVI 561 Query: 436 NYASHRFS 443 + S Sbjct: 562 ETIKQKLS 569 >gi|89093619|ref|ZP_01166566.1| prolyl-tRNA synthetase [Oceanospirillum sp. MED92] gi|89082015|gb|EAR61240.1| prolyl-tRNA synthetase [Oceanospirillum sp. MED92] Length = 574 Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 164/224 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + ++E P DAE+ SH+LMLR G+I + + G+Y+WLPLG + L V I+REE Sbjct: 1 MRTSQYLISTVKETPSDAEVISHQLMLRAGLIRKVASGLYNWLPLGLRTLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA+E+ +P +Q A+LW ESGR++ YG E+LR+ DR+++ GPTHEEV+TD+ R Sbjct: 61 MDKSGAMEVLMPAVQPAELWEESGRWEQYGPELLRVNDRHNREFCVGPTHEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + + +Y+ M + Sbjct: 121 EIKSYKQLPANFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHVGQDSLQETYDVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL P+ A++G IGG SHEF VLAD+GE + S Sbjct: 181 YTNIFTRLGLDFRPVLADTGSIGGATSHEFHVLADSGEDDIAFS 224 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/167 (37%), Positives = 97/167 (58%), Gaps = 3/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS + A +GK + MG YGIG RV+AA IE +HD GII Sbjct: 407 RGIEVGHIFQLGQKYSEALKAEVLDQNGKSVVMNMGCYGIGVTRVIAAAIEQNHDDGGII 466 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQI--GSQFAVAD 396 WP+++APF I+LI ++ ++ +++Y L + G DV DD ++ G +FA D Sbjct: 467 WPEAIAPFHIALIPLQYDKSAEVKELTDRLYQELQQAGYDVIVDDRDKKTSPGVKFADMD 526 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 L+G P +V++ + +E K R ++D+ ++EV+ + R + Sbjct: 527 LMGIPHRVVISPRGNEAGTLEYKGRRDDEKQDVQIDEVLPLLAERIN 573 >gi|24374667|ref|NP_718710.1| prolyl-tRNA synthetase [Shewanella oneidensis MR-1] gi|81845788|sp|Q8ECI8|SYP_SHEON RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|24349306|gb|AAN56154.1|AE015752_11 prolyl-tRNA synthetase [Shewanella oneidensis MR-1] Length = 570 Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 124/244 (50%), Positives = 167/244 (68%), Gaps = 8/244 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPSGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDMDTLNETYEAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y I R+GL P+ A++G IGG +SHEF VLA +GE + S + + P+ Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIEKAESPM 240 Query: 233 PSEN 236 P+E Sbjct: 241 PTET 244 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 107/186 (57%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + H D E++Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS G DV DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LSAAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDVPF 558 Query: 432 EEVINY 437 ++++++ Sbjct: 559 DQIVDF 564 >gi|68249330|ref|YP_248442.1| prolyl-tRNA synthetase [Haemophilus influenzae 86-028NP] gi|229844600|ref|ZP_04464739.1| prolyl-tRNA synthetase [Haemophilus influenzae 6P18H1] gi|81336245|sp|Q4QMG5|SYP_HAEI8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|68057529|gb|AAX87782.1| prolyl-tRNA synthetase [Haemophilus influenzae 86-028NP] gi|229812314|gb|EEP48004.1| prolyl-tRNA synthetase [Haemophilus influenzae 6P18H1] Length = 572 Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 132/276 (47%), Positives = 175/276 (63%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFRRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + I++ + AP A D N K L E Sbjct: 237 EAIAIG----ERQAPTAEMCLVDTPNAKTIAELVEQ 268 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 405 RGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDDRGII 464 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 465 WPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P V++G K + + ++E K+R TG +E +S +++++ + + N Sbjct: 525 IGIPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|317121850|ref|YP_004101853.1| prolyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] gi|315591830|gb|ADU51126.1| prolyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] Length = 586 Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 162/224 (72%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+++P +AEIASH+LMLR G+I + + GIY WLPLG++A+ V AI+REE Sbjct: 1 MRWSRLLIPTLRDDPAEAEIASHRLMLRAGLIRRVTAGIYEWLPLGRRAVAKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G +E+ +P +Q A+LW E+GR+ YG+EM RL DR+ + GPTHEE++TD+ R+ Sbjct: 61 MNRKGGLEVGLPIVQPAELWRETGRWAEYGEEMWRLKDRHGREYCLGPTHEEIITDLVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ K+RDE+RPRFGVMR+REF+MKDAYSFD+ EG + SY M + Sbjct: 121 TVSSYRQLPLLLYQIQNKYRDEIRPRFGVMRAREFVMKDAYSFDVDAEGLERSYQAMDDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL + A+ G IGG +HEF+ LAD GE V+C Sbjct: 181 YRRIFSRCGLVFRAVAADPGAIGGSGTHEFMALADYGEALIVYC 224 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 80/176 (45%), Positives = 106/176 (60%), Gaps = 2/176 (1%) Query: 269 DSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 DS P+ SARGIEVG IF TKYS + TFK ADG++ + MG YGIG R VA Sbjct: 394 DSCPDCGAPMASARGIEVGQIFKLWTKYSEALGCTFKDADGRERPMVMGCYGIGVTRTVA 453 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 AVIE HD KGIIWP SVAPF ++ + ++ R A E+IY +L + G + DD E Sbjct: 454 AVIEQHHDEKGIIWPMSVAPFHAVVVPVNYNEPDQRQAAERIYGQLVEAGVEAVLDDRDE 513 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 + G +F ADL+GFPL+V VG + +++ KVEI R TG + + +E + R Sbjct: 514 RPGVKFNDADLIGFPLRVTVGPRGLAEGKVEIVDRATGQADPVPVEHAAAEVARRV 569 >gi|224058287|ref|XP_002194154.1| PREDICTED: prolyl-tRNA synthetase 2, mitochondrial (putative) [Taeniopygia guttata] Length = 470 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 153/435 (35%), Positives = 226/435 (51%), Gaps = 46/435 (10%) Query: 1 MRRSKYFLPIL---------QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALD 51 +R S+ F P+ + P + S +LML+ G+IH S G Y +LP +A++ Sbjct: 34 LRLSQLFQPLALPVGGQVSSEARPGEPTCRSQRLMLQAGLIHPTSPGCYCYLPPTVRAME 93 Query: 52 NVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHE 111 + ++ EE G ++++P+L SA+LW SGR+D G E+ RL DR+D GPTHE Sbjct: 94 KLIQLMDEEMQAVGGQKLNLPSLCSAELWRASGRWDQMGPELFRLVDRHDHGYCLGPTHE 153 Query: 112 EVMTDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGS 170 EV+T + S SY+ LP YQ+ KFRDE +PRFG++RSREF MKD Y+FD + E + Sbjct: 154 EVVTALVASQTGLSYKQLPLRLYQVTRKFRDEPKPRFGLLRSREFYMKDMYTFDSSEEAA 213 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMD 229 + +Y ++ +Y +F RLGL + ++A +G IGG SHEF + AD GE + + C + Sbjct: 214 RRTYEQVCAAYCSLFARLGLPFVKVQAATGSIGGSTSHEFQLPADIGEDRLLLCPQGHFA 273 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 + + N EQ AP EKL ++ +GIEVGH FY Sbjct: 274 AKVETLNR------------EQPRAPTC------GEKLTET---------KGIEVGHTFY 306 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 GTKYS +A F A+ K +MG YG+G R++AA IE I WP +AP+++ Sbjct: 307 LGTKYSSVANAVFSSAENKPQLAEMGCYGLGVTRILAASIEVLSTEDSIRWPSLIAPYQL 366 Query: 350 SLINIKAHDQ---VCRDACEKIYARLSK----VGCDVFWDDMGE-QIGSQFAVADLLGFP 401 I K + E++Y L + + D DD + IG + A LG+P Sbjct: 367 CFIPPKRGSKEEEEGAALLERVYDELEEALPHLAGDSVLDDRSQLTIGKRLKDAKRLGYP 426 Query: 402 LQVIVGSKFVSDSKV 416 V+ G + D V Sbjct: 427 YVVVAGKRVCEDPPV 441 >gi|256823089|ref|YP_003147052.1| prolyl-tRNA synthetase [Kangiella koreensis DSM 16069] gi|256796628|gb|ACV27284.1| prolyl-tRNA synthetase [Kangiella koreensis DSM 16069] Length = 571 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 121/226 (53%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E+P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V AI+REE Sbjct: 1 MRSSQYLLSTQREDPSDAELISHKLMLRAGMIRKIASGMYTWLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIEM +P++Q ++LW ESGR+D +G E+LR DR+ + GPTHEE++T + R Sbjct: 61 MNKAGAIEMLMPSVQPSELWEESGRWDQFGPELLRFKDRHGRDFCLGPTHEEIITAVIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + E +Y M + Sbjct: 121 EINSYKQLPASFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHVDEESLSETYQVMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R+GL P+ A++G IGG SHEF VLA++GE + S + Sbjct: 181 YCNIFERIGLDYRPVLADTGAIGGSNSHEFHVLAESGEDAIAFSSE 226 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 110/190 (57%), Gaps = 3/190 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 Q A + D+ N D P+ K + RGIEVGHIF G KYS M+ +GK Sbjct: 375 QRDAQISEVMDIRNVVAGDPSPDGKGILEIKRGIEVGHIFQLGNKYSEAMNCKVLDQNGK 434 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEK 367 + MG YG+G R+VAA IE ++D GIIWP ++APF++++I + H + + +K Sbjct: 435 AVTLAMGCYGVGVSRIVAAAIEQNYDNNGIIWPQAIAPFQVAIIPMNMHRSEQVQQIADK 494 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y L + G DV +DD E+ G F+ +L+G P +++V + + + +E K+R ++ Sbjct: 495 LYQDLQQQGIDVIFDDRKERPGVMFSDMELIGVPHRLVVSERGLENGTIEYKNRQNTAKD 554 Query: 428 DMSLEEVINY 437 D+S+E V++Y Sbjct: 555 DVSVENVVDY 564 >gi|260583173|ref|ZP_05850953.1| prolyl-tRNA synthetase [Haemophilus influenzae NT127] gi|260093791|gb|EEW77699.1| prolyl-tRNA synthetase [Haemophilus influenzae NT127] Length = 572 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE 226 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 405 RGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDDRGII 464 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 465 WPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P V++G K + + ++E K+R TG +E +S +++++ + + N Sbjct: 525 IGIPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|87121381|ref|ZP_01077270.1| prolyl-tRNA synthetase [Marinomonas sp. MED121] gi|86163224|gb|EAQ64500.1| prolyl-tRNA synthetase [Marinomonas sp. MED121] Length = 575 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 127/253 (50%), Positives = 169/253 (66%), Gaps = 4/253 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L+ P DA + SHKLM+R GMI Q SKG+Y+WLP G K V I+REE Sbjct: 1 MRASNYLFSTLRNPPTDAVVTSHKLMMRAGMIRQVSKGLYTWLPTGLKVFRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q +LW ESGR+ YG E+LR+ DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MQRAGALEIIMPGVQPKELWEESGRWQEYGPELLRIKDRHERDYCLGPTHEEVVTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF +PE + +Y+ M + Sbjct: 121 EISSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFMMKDAYSFHSSPESLQTTYDVMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y ++F R+GL P+RA++G IGG SHEF VLA++GE + S D DF + N + Sbjct: 181 YCKVFDRVGLNYRPVRADTGSIGGAFSHEFHVLAESGEDDIAFS-DSSDF---AANIELA 236 Query: 241 DIISLNSIVEQWT 253 + IS I + T Sbjct: 237 EAISDKQIADAPT 249 Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 110/188 (58%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K V RGIEVGHIF G KY+ ++A +GK + MG Sbjct: 388 VADIRNVVAGDPSPDGKGVIEIKRGIEVGHIFQLGQKYADALNANVLDENGKAQTMWMGC 447 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG RVVAA IE + D KGI+WPD++APF++S++ +K + R+ ++IYA L Sbjct: 448 YGIGVSRVVAAAIEQNFDDKGILWPDAIAPFQVSIVAMKYEKSEAVREQADRIYAELQAA 507 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G +FA A+LLG P +V++ K + +E KHR TG +D+SL+ ++ Sbjct: 508 GVDVMLDDRKASPGVKFADAELLGIPHRVVISDKGLEKGTIEYKHRRTGDNDDLSLDSLV 567 Query: 436 NYASHRFS 443 R + Sbjct: 568 KTLISRLN 575 >gi|94676512|ref|YP_589036.1| prolyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|114152171|sp|Q1LSM8|SYP_BAUCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|94219662|gb|ABF13821.1| prolyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 557 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 124/268 (46%), Positives = 177/268 (66%), Gaps = 6/268 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L ++E P DAE+ SH+LMLR G+I Q + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTIKEIPLDAEVISHQLMLRAGIIRQLASGLYTWLPTGLRILRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q A+LW+ESGR+ YG E+LR DR+ + + GPTHEEV+TD+ R+ Sbjct: 61 MNNIGAIEVSMPIVQPANLWLESGRWGQYGPELLRFTDRSTRQFLLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP +QI+ KFRDE+RPR+GVMRSREF+MKDAYSF + + + +Y+ M+ + Sbjct: 121 EVKSYKQLPLNLFQIKTKFRDEVRPRYGVMRSREFIMKDAYSFHTSQQSLQATYDLMYYT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF---CSKDFMDFPIPSENT 237 Y IF+R+GL ++A+ G IGG LSHEF+ L E Q+ S + +PSEN Sbjct: 181 YNTIFNRIGLDVRTVQADPGSIGGHLSHEFLALVSNYEDQMLLIDASHKATERNLPSENL 240 Query: 238 DFDD---IISLNSIVEQWTAPYAATSDV 262 D I +L +V+ + P + + Sbjct: 241 QLVDAPGIYTLTELVKLFNLPIEKIAQI 268 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 102/164 (62%), Gaps = 1/164 (0%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF G+KYS M AT +G DG + + MG YGIG RVVAA I+ +D +G++ P Sbjct: 394 IEVGHIFQLGSKYSKVMKATVQGEDGNNMIMTMGCYGIGITRVVAAAIDKYNDKQGLLLP 453 Query: 342 DSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 S+APF++++I I H + + E++Y +LS DV DD E+ G FA +L+G Sbjct: 454 VSIAPFQVAIIPINLHKSLLVQTVAEQLYNQLSIRKIDVLLDDRKERPGVMFADIELIGI 513 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 P +I+G + ++ K+E K+R G ++ M+L ++++ + ++ Sbjct: 514 PHIIIIGDRNLAVQKIEYKNRSNGEKKLMNLSIIVDWIVAKLNS 557 >gi|326925418|ref|XP_003208912.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Meleagris gallopavo] Length = 470 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 161/428 (37%), Positives = 229/428 (53%), Gaps = 37/428 (8%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 SH+LML+ G+IH S G Y LP ++++ + +I G ++++P+L SA+LW Sbjct: 65 SHRLMLQGGLIHPASPGCYHLLPPAVRSMEKLIRLIDGAMRNIGGQKVNMPSLSSAELWR 124 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPFTFYQIQLKFR 140 SGR++ G E+ RLADR+ K GPTHEE +T++ +H SYR+LP YQ+ KFR Sbjct: 125 ASGRWEQMGPELFRLADRHSKEYCLGPTHEEAVTELVAAHSNLSYRHLPLRLYQVTRKFR 184 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 DE +PRFG++RSREF MKD Y+FD + E ++H+Y + +Y +F LGL+ + +RA +G Sbjct: 185 DEPKPRFGLLRSREFYMKDMYTFDTSEEAARHTYELVCRAYRSLFKHLGLRCVQVRAATG 244 Query: 201 PIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 IGG SHEF + AD GE + V C + N + D EQ P Sbjct: 245 TIGGTASHEFQLPADIGEDRLVLCPAGHF-----AANVEMVD-------EEQTACPTC-- 290 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 EKL S RGIEVGH FY GTKYS +A F + K +MG YG+ Sbjct: 291 ----GEKLTQS---------RGIEVGHTFYLGTKYSSVHNAVFYTPENKLQLAEMGCYGL 337 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC--EKIYARLSK-VG 376 G R++AA IE I WP +APF+ I K + A E++Y +++ + Sbjct: 338 GVTRILAASIEVLSTEDSIRWPSLIAPFQACFIPPKKGSKEEEGAVLLEQLYDDVAEALP 397 Query: 377 C---DVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV-EIKHRLTGIREDMSL 431 C DV DD + IG + A+ LG+P VI G + D V E+ + TG ++ Sbjct: 398 CLVGDVVLDDRTQMTIGKRLKDANKLGYPYVVIAGRRACEDPPVFEVWDQSTGTVLYLTK 457 Query: 432 EEVINYAS 439 E VI S Sbjct: 458 EGVIELLS 465 >gi|113869200|ref|YP_727689.1| prolyl-tRNA synthetase [Ralstonia eutropha H16] gi|123133602|sp|Q0K6Q0|SYP_RALEH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|113527976|emb|CAJ94321.1| Prolyl-tRNA synthetase [Ralstonia eutropha H16] Length = 573 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 122/224 (54%), Positives = 162/224 (72%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYNYMPIGLRVIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+S+P +Q A+LW E+GR+D G E+LRL DR+++ PT EEV+TDI RS Sbjct: 61 MNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKDRHERDFAVQPTSEEVVTDIARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD +G + SY M+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDTDGLRKSYENMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y+RIF R GL+ + A++G IGG SHEF V+ADTGE V+C Sbjct: 181 YVRIFRRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYC 224 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ + RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 381 PEPVVADLRNVVAGDASPDGQGTLEICRGIEVGHVFMLGTRYSESMNATFLDENGKTQPM 440 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE + D +GIIWP ++APF + + + + + ++I+A Sbjct: 441 QMGCYGIGVTRILGAAIEQNFDERGIIWPAAIAPFAVVICPVGYDRSEAVKAEADRIHAE 500 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P +V+VG + + + KVE + R +S+ Sbjct: 501 LLAAGVDVILDDRGERPGVMFADWELIGVPHRVVVGDRGLKEGKVEYQGRRDAQATAVSV 560 Query: 432 EEVINYASHRFSN 444 +V+ + + +N Sbjct: 561 ADVVGHVRSQLAN 573 >gi|149378080|ref|ZP_01895802.1| prolyl-tRNA synthetase [Marinobacter algicola DG893] gi|149357649|gb|EDM46149.1| prolyl-tRNA synthetase [Marinobacter algicola DG893] Length = 577 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 121/226 (53%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + +E P DAEI SH++MLR GMI + + G+YSWLP+G + L V I+REE Sbjct: 1 MRASRYLIATQKETPADAEIISHQMMLRAGMIRKLASGLYSWLPMGLRVLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ +P +Q A+LW ESGR++ YG E+LR+ DR+ + +GPTHEEV+TD+ R+ Sbjct: 61 MDKSGAQEVLMPAVQPAELWQESGRWEQYGGELLRMNDRHGRDFCFGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE RPRFGVMR+REF+MKDAYSF + E +Y M + Sbjct: 121 ELKSYKELPANFYQIQTKFRDERRPRFGVMRAREFIMKDAYSFHVNAESLNDTYQVMHRT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF RLGL P+ A+SG IGG SHEF VLA +GE + S D Sbjct: 181 YCAIFDRLGLDYRPVEADSGAIGGSASHEFHVLASSGEDAIVFSTD 226 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 66/159 (41%), Positives = 99/159 (62%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M+AT +GK ++MG YGIG R+VA+ IE +HD KGII Sbjct: 409 RGIEVGHIFKLGNKYSKAMNATVLDENGKSAILEMGCYGIGVSRIVASSIEQNHDDKGII 468 Query: 340 WPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H A EK+Y +L + G DV DD E+ G +FA +L+ Sbjct: 469 WPDAIAPFEVAIVTLNGHKSPAVMAAGEKLYEQLRQAGFDVLLDDRNERPGVKFADMELI 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P + +V + ++ +E K R ++D+ L E + + Sbjct: 529 GIPHRFVVSERGLAAETLEYKGRRDEDKQDIPLAEALPF 567 >gi|117619295|ref|YP_858106.1| prolyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|152074744|sp|A0KPA5|SYP_AERHH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|117560702|gb|ABK37650.1| prolyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 574 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 118/218 (54%), Positives = 154/218 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L + I+REE Sbjct: 1 MRTSQYLLSTLKETPSDAEIVSHQLMLRAGMIRKLASGMYAWLPSGLRVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q A+LW ESGR+D YG E+ RL DR+++ + GPTHEEV+T + R Sbjct: 61 MNNAGAIEVSMPVVQPAELWQESGRWDDYGPELCRLTDRHNRPFVLGPTHEEVITSLVRY 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + +Y +M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHIDKASLIETYERMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y F R+GL P++A++G IGG SHEF VLA++GE Sbjct: 181 YCAAFTRMGLNFRPVQADTGSIGGTGSHEFQVLAESGE 218 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 119/218 (54%), Gaps = 20/218 (9%) Query: 223 CSKDFMDFPIPSENTDFD----DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 C + F + N D D ++ L ++VE +P + K + Sbjct: 363 CGANETGFHLTGANWDRDIASYEVADLRNVVEGDPSPCG---------------QGKLLL 407 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIEVGHIF GTKYS M A+ GK ++MG YGIG R+VAA IE ++D GI Sbjct: 408 KRGIEVGHIFQLGTKYSEAMKASVLNEGGKSVTMEMGCYGIGVSRLVAAAIEQNNDQYGI 467 Query: 339 IWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWP+++APF+++++ + H + + ++ YA L G DV +DD E+ G FA +L Sbjct: 468 IWPEAIAPFEVAIVPMNMHKSERVAEQAQQFYAELKAAGVDVLFDDRKERPGVMFADMEL 527 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LG P +++G + + + VE K R TG ++++++ E++ Sbjct: 528 LGVPHAIVIGDRGLDNGVVEYKCRRTGEKQEVAISEIV 565 >gi|113461448|ref|YP_719517.1| prolyl-tRNA synthetase [Haemophilus somnus 129PT] gi|123031424|sp|Q0I4S8|SYP_HAES1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|112823491|gb|ABI25580.1| prolyl-tRNA synthetase [Haemophilus somnus 129PT] Length = 571 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 133/282 (47%), Positives = 177/282 (62%), Gaps = 14/282 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSKYLLSTLKETPNDAQVVSHQLMLRAGMIRPLASGLYNWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ES R++ YG E+LR DR ++ + GPTHEEV+TD+ Sbjct: 61 MNKSGAIEVEMPVVQPAELWQESQRWEQYGPELLRFVDRGNRDFVLGPTHEEVITDLVHR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E +++Y+ M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHTSKECLQNTYDVMYRT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE + + S N+D+ Sbjct: 181 YNNIFTRLGLDFRAVQADTGSIGGSASHEFQVLAKSGEDDI----------VFSSNSDYA 230 Query: 241 DIISLNSIVE--QWTAPYAATS--DVHNEKLFDSLPENKRVS 278 I L V Q AP A D N K + L E +S Sbjct: 231 ANIELAEAVAIGQRQAPSATMELVDTPNAKTINDLVEQFNLS 272 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 111/189 (58%), Gaps = 4/189 (2%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG+ + MG Sbjct: 382 VADLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRPQTMIMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIW-PDSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG RVVAA IE HD KGIIW D +APF +++I + + + + E++Y L Sbjct: 442 YGIGVSRVVAATIEQCHDEKGIIWSSDEIAPFTVAIIPMNMYKSKNVQIFAEELYQSLLN 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 DV +DD E+ G FA +L+G P +++G K + ++E K+R TG ++ ++ E+V Sbjct: 502 KNVDVIFDDRKERPGVMFADMELIGVPHMIVIGEKNLEKGEIEYKNRRTGEKQIIAKEQV 561 Query: 435 INYASHRFS 443 +++ + R + Sbjct: 562 LDFLAQRVN 570 >gi|217969648|ref|YP_002354882.1| prolyl-tRNA synthetase [Thauera sp. MZ1T] gi|217506975|gb|ACK53986.1| prolyl-tRNA synthetase [Thauera sp. MZ1T] Length = 582 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 126/224 (56%), Positives = 162/224 (72%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DAE+ S KLMLR GMI + + GIYS++P+G +A+ V AI+REE Sbjct: 1 MRASQFHLFTLKEAPSDAEVVSQKLMLRAGMIRKVAAGIYSYMPMGLRAIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW E+GR+D G E+LR DR+++ PT EEV+TDI R Sbjct: 61 MDRAGAMELIMPMVQPAELWDETGRWDKMGDELLRFKDRHERDFALQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQIQ KFRDE RPRFGVMR REF MKDAYSFD + E + SY+ MF + Sbjct: 121 ELKSYRQLPKNFYQIQTKFRDERRPRFGVMRGREFTMKDAYSFDRSEEAAGRSYDIMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF RLGL+ + A++G IGGD SHEF V+ADTGE V+C Sbjct: 181 YKRIFDRLGLEYRAVAADTGAIGGDRSHEFQVIADTGEDAIVYC 224 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 91/289 (31%), Positives = 134/289 (46%), Gaps = 36/289 (12%) Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV---FCS 224 EG K + F + I G K + GPIG L V+AD + C Sbjct: 319 EGLKAGFR--FATEAEILEHFGCKPGYL----GPIG--LKKPVKVIADRTVAHMADFICG 370 Query: 225 KDFMDFPIPSEN-----TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 + DF N + D + L ++VE D P+ + V A Sbjct: 371 ANEADFHFTGVNWGRDLPEPDQVADLRNVVEG-----------------DPSPDGRGVLA 413 Query: 280 --RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 RGIEVGH+FY GTKYS M+ATF DGK + +MG YGIG R++ A IE +HD +G Sbjct: 414 IQRGIEVGHVFYLGTKYSKAMNATFLDEDGKPKHFEMGCYGIGVTRILGAAIEQNHDARG 473 Query: 338 IIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 I+WP ++APF++ + + Q RD +K+Y L G D DD E+ G FA + Sbjct: 474 IVWPRAIAPFEVVVCPVGWGKSQAVRDEAQKLYDALVATGVDAILDDRDERPGVMFADWE 533 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 L+G P +V +G + + + +E + R + EV+ + R + Sbjct: 534 LIGVPHRVTIGDRGLKEGVIEYQGRRDAEAAKLPAGEVLGHVLERLNQG 582 >gi|170718445|ref|YP_001783662.1| prolyl-tRNA synthetase [Haemophilus somnus 2336] gi|189083500|sp|B0UWK9|SYP_HAES2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|168826574|gb|ACA31945.1| prolyl-tRNA synthetase [Haemophilus somnus 2336] Length = 571 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 133/282 (47%), Positives = 177/282 (62%), Gaps = 14/282 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSKYLLSTLKETPNDAQVVSHQLMLRAGMIRPLASGLYNWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ES R++ YG E+LR DR ++ + GPTHEEV+TD+ Sbjct: 61 MNKSGAIEVEMPVVQPAELWQESQRWEQYGPELLRFVDRGNRDFVLGPTHEEVITDLVHR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E +++Y+ M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHTSKECLQNTYDVMYRT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE + + S N+D+ Sbjct: 181 YNNIFTRLGLDFRAVQADTGSIGGSASHEFQVLAKSGEDDI----------VFSSNSDYA 230 Query: 241 DIISLNSIVE--QWTAPYAATS--DVHNEKLFDSLPENKRVS 278 I L V Q AP A D N K + L E +S Sbjct: 231 ANIELAEAVAIGQRQAPSATMELVDTPNAKTINDLVEQFNLS 272 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 111/189 (58%), Gaps = 4/189 (2%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG+ + MG Sbjct: 382 VADLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRPQTMIMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIW-PDSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG RVVAA IE HD KGIIW D +APF +++I + + + + E++Y L Sbjct: 442 YGIGVSRVVAATIEQCHDEKGIIWSSDEIAPFTVAIIPMNMYKSKNVQIFAEELYQSLLN 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 DV +DD E+ G FA +L+G P +++G K + ++E K+R TG ++ ++ E+V Sbjct: 502 KNVDVIFDDRKERPGVMFADIELIGVPHMIVIGEKNLEKGEIEYKNRRTGEKQIIAKEQV 561 Query: 435 INYASHRFS 443 +++ + R + Sbjct: 562 LDFLAQRVN 570 >gi|78042796|ref|YP_360595.1| prolyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] gi|114152179|sp|Q3AB89|SYP_CARHZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|77994911|gb|ABB13810.1| prolyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] Length = 569 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 121/265 (45%), Positives = 175/265 (66%), Gaps = 4/265 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P L+ENP +AE+ SHKL+LR G I + + G+Y++LPL Q+ L + IIREE Sbjct: 1 MRLSQYFMPTLRENPAEAEVISHKLLLRAGFIRKSASGVYTYLPLAQRVLKKIMQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P LQ A+LW+E+GR+ YG E+ +L DR+++ GPTHEE++TD+ R Sbjct: 61 MDRQGGQELMLPILQPAELWLETGRWHVYGPELFKLKDRHNRDFCLGPTHEEIITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE RPRFG+MR REF+MKD YSFD EG + SY KM+ + Sbjct: 121 EVRSYKELPLLLYQIQNKYRDEKRPRFGLMRGREFIMKDLYSFDRDEEGLEISYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDF 239 Y +F R GLK + A++G IGG +HEF+VLA++GE V+C D + E + Sbjct: 181 YTNVFTRCGLKFRAVEADAGAIGGSTTHEFMVLANSGEAVVVYCPDDNCGYAANLEKAET 240 Query: 240 D---DIISLNSIVEQWTAPYAATSD 261 ++I + +++ P T D Sbjct: 241 KFTPEVIGTPAEIQKVATPNVKTVD 265 Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 63/160 (39%), Positives = 93/160 (58%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V ARGIEVG IF KYS M A + +G+ + MG YGIG R +AA +E +HD Sbjct: 401 VFARGIEVGQIFKLKDKYSRKMGAFYLDENGQQKPIIMGCYGIGVTRTMAAAVEQNHDED 460 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 GIIWP ++APF++ ++ + D+ E++Y L G +V DD E+ G +F AD Sbjct: 461 GIIWPAAIAPFEVIVVPVSNKDEQQMKMAEEVYNLLLNAGFEVVIDDRDERPGVKFKDAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+G PL++ VG + VS+ E+K R T + EE+++ Sbjct: 521 LIGIPLRITVGKRTVSEGVYEVKIRRTREEKVFQKEELVD 560 >gi|262368848|ref|ZP_06062177.1| prolyl-tRNA synthetase [Acinetobacter johnsonii SH046] gi|262316526|gb|EEY97564.1| prolyl-tRNA synthetase [Acinetobacter johnsonii SH046] Length = 572 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L+ V AI+ EE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGVRVLNKVAAIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G++E+ +P Q A LW ESGRY YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGSLEVLMPVTQPASLWEESGRYVQYGPELLRFKDRHGNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQ+Q KFRDE+RPRFGVMRSREF+MKDAYSF E + +Y+ M+ + Sbjct: 121 ELKSYKQLPANFYQVQTKFRDEIRPRFGVMRSREFIMKDAYSFHSNQESLQETYDIMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF RLGL P++A++G IGG SHEF VLA +GE + S + Sbjct: 181 YCKIFTRLGLDFRPVQADTGSIGGSGSHEFHVLASSGEDDIAFSTE 226 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 3/185 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A + D+ N D P+ K RGIEVGHIF G KYS + G DGK Sbjct: 383 AQFTEVYDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGQKYSEALGCKVLGEDGKPFT 442 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYA 370 V MG YGIG RVVA+ IE + D KGIIWP ++APF+++++ + AH +A E +YA Sbjct: 443 VTMGCYGIGVTRVVASAIEQNFDEKGIIWPAAIAPFEVAIVPMNAHKSPRSLEAAEALYA 502 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L+ G DV DD E+ G +F+ +L G P ++++G K + E K R ++S Sbjct: 503 ELTTAGYDVLLDDRNERPGVKFSDLELTGIPHRIVIGEKGLDAGTFEYKGRRDAESVNIS 562 Query: 431 LEEVI 435 +E++ Sbjct: 563 KDELL 567 >gi|258543749|ref|ZP_05703983.1| proline--tRNA ligase [Cardiobacterium hominis ATCC 15826] gi|258520985|gb|EEV89844.1| proline--tRNA ligase [Cardiobacterium hominis ATCC 15826] Length = 567 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 157/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+++L +E P DAE+ SH+LMLR GMI Q++ G+YSWLPLG + L V IIREE Sbjct: 1 MRLSRFWLTTQKETPADAEVISHQLMLRAGMIRQNALGVYSWLPLGLRVLRKVEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G++E+ +P +Q +LW ESGR+ YG E+LR DR+++ GPTHEEV+TD+ R Sbjct: 61 MNRAGSLELLMPGVQPGELWQESGRWQDYGPELLRFLDRHEREYCLGPTHEEVITDLMRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF L + +Y M+ + Sbjct: 121 DLSSYKQLPLNVYQIQTKFRDEIRPRFGVMRGREFLMKDAYSFHLDEASLQATYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF RLGL P+ A++G IGG SHEF VLA TGE + S Sbjct: 181 YCRIFDRLGLDYRPVLADNGSIGGTGSHEFHVLAATGEDAIVFS 224 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 101/183 (55%), Gaps = 3/183 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ A RGIEVGHIF G KYS M + DG Sbjct: 377 PLGKVADLRNIVEGDPAPDGSGTLAIRRGIEVGHIFQLGKKYSEAMGLKIQLEDGGSAIP 436 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWP ++APF ++++ + A A E +Y + Sbjct: 437 LMGCYGIGVTRVVAAAIEQNHDERGIIWPQAIAPFTVAILPLNAAKSPEVMAAAEALYQK 496 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD G++ G FA DL+G P +V++ K +++ +VE K R + E ++L Sbjct: 497 LLAAGVDVVLDDRGKRPGFMFADMDLIGIPARVVISDKTLANGEVEYKERRSDSAEMVAL 556 Query: 432 EEV 434 + + Sbjct: 557 DAI 559 >gi|109005002|ref|XP_001114166.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Macaca mulatta] Length = 475 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 148/412 (35%), Positives = 221/412 (53%), Gaps = 36/412 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 LQ+ D S +LML+ G+I+ S G Y LP +A++ + +I +E G +++ Sbjct: 59 LQDKFGDLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVN 118 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLP 129 +PTL A+LW + R+D GKE+LRL DR+ K GPTHEE +T + + K SY+ LP Sbjct: 119 MPTLSPAELWQATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAITALIAAQKKLSYKQLP 178 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ +YN + +Y +F+RLG Sbjct: 179 FLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQTYNLVCDAYCSLFNRLG 238 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDFDDIISLNSI 248 L+ + ++A+ G IGG +SHEF + D GE ++ C S N + D+ +N Sbjct: 239 LRFVKVQADVGSIGGTMSHEFQLPVDVGEDRLAICPHCSF-----SANLETLDLSQMNCP 293 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 Q +P T +GIEVGH FY GTKYS +A F GK Sbjct: 294 ACQ--SPLTET--------------------KGIEVGHTFYLGTKYSSIFNAQFTNIYGK 331 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK------AHDQVCR 362 +MG YG+G R++AA IE + WP +AP++ LI K A ++ Sbjct: 332 PSLAEMGCYGLGVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEEAASELIG 391 Query: 363 DACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 C+ I + ++ +V DD IG++ A+ G+P +I G + + D Sbjct: 392 QLCDHITEAVPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALED 443 >gi|289207688|ref|YP_003459754.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] gi|288943319|gb|ADC71018.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] Length = 570 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 121/221 (54%), Positives = 159/221 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DAEI SH+LMLR G + + + G+Y+WLPLG + L V I+REE Sbjct: 1 MRVSQFPLNTLKETPADAEIVSHQLMLRAGYVRRLAAGLYTWLPLGLRVLRRVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ESGR+D YG E+LRL DR+++ +GPTHEEV+TD+ R Sbjct: 61 MNRAGALEVLMPAVQPAELWQESGRWDFYGAELLRLKDRHERDFCFGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP +YQIQ KFRDE RPRFG+MR+REFLMKDAYSF L + +Y +M + Sbjct: 121 EIRSYRQLPVNYYQIQTKFRDERRPRFGIMRAREFLMKDAYSFHLDADSLSRTYQQMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R GL + A++G IGG+ SHEF VLA +GE + Sbjct: 181 YCRIFERCGLDFRAVEADTGAIGGNASHEFHVLASSGEDAI 221 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 1/166 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS + A DG++ V MG YGIG RVVAA IE + D +GI Sbjct: 405 RGIEVGHIFQLGDKYSQALGARVLDEDGREQVVTMGCYGIGVSRVVAAAIEQNSDERGIC 464 Query: 340 WPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF I+L I A Q R+A EK++ L G V DD ++ G FA +L+ Sbjct: 465 WPTAIAPFDIALCPIGAKKSQRVREAAEKLHDELEAAGFQVLLDDREQRPGVMFADMELI 524 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G P ++++G + + ++E + R E + ++ +++ R Sbjct: 525 GIPHRLVIGERGLDAGELEYQARTASEAEHLPMDGLLDALRERLQG 570 >gi|138894777|ref|YP_001125230.1| prolyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|166980126|sp|A4IMD1|SYP_GEOTN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|134266290|gb|ABO66485.1| Prolyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] Length = 567 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G + Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQGFIPTLREVPADAEVKSHQLLLRAGFVRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ + GPTHEE++T I R Sbjct: 61 MNRAGALELLMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFVLGPTHEEMITTIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +YNKM+ + Sbjct: 121 EVKTYKRLPLILYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHTSQESLDETYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG +GG +HEF+VL+D GE + S Sbjct: 181 YANIFRRCGLNFRAVIADSGAMGGKDTHEFMVLSDIGEDTIAYS 224 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 1/157 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GTKYS M+A + +G+ + MG YGIG R+VAA+ E D G+ Sbjct: 403 ARGIEVGHVFKLGTKYSEAMNAVYLDENGRTQTMIMGCYGIGVSRLVAAIAEQFADENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SVAPF + L+ A R E+ Y +L + G DV +DD E+ G +FA +DL+ Sbjct: 463 VWPVSVAPFHVHLLTANAKSDEQRMLAEEWYEKLGQAGFDVLYDDRPERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G PL+V VG K S+ VE+K R TG D+ + E+I Sbjct: 523 GIPLRVTVG-KRASEGVVEVKVRKTGETFDVPVGELI 558 >gi|171463016|ref|YP_001797129.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|226701317|sp|B1XT38|SYP_POLNS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|171192554|gb|ACB43515.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 580 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 125/224 (55%), Positives = 161/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ FL L+E P DAE+ SHKLM+R G+I + S G+Y++LPLG K + V IIREE Sbjct: 1 MKASQSFLATLKEAPSDAEVVSHKLMVRAGLIRKLSAGVYNYLPLGLKVIRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW E+GR++ G E+LR+ DR+D+ + PT EEV+TD+ R+ Sbjct: 61 MNRAGAIELLMPMIQPAELWQETGRWEKMGPELLRIKDRHDRDFLIQPTSEEVVTDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY MF + Sbjct: 121 EIKSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFSMKDAYSFDRDTEGLKKSYQIMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R+GL+ + A++G IGG S EF V+ADTGE V+C Sbjct: 181 YTRIFKRMGLQFRAVTADNGAIGGSGSQEFHVIADTGEDAIVYC 224 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 3/183 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N + D P+ K V RGIEVGH+F GT+YS M T+ GK + Sbjct: 382 PEPLVLDIRNAVVGDPSPDGKGVVDICRGIEVGHVFQLGTRYSEAMGCTYLDQQGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE HD KGIIWP S+AP ++ + + + + AC++++ Sbjct: 442 VMGCYGIGVTRLLGAAIEQGHDEKGIIWPISMAPCEVVICPMGYEKSEAVKAACDQLHDG 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G+ FA L+G P +V++G + + DS+VE K R +++ L Sbjct: 502 LLAAGVDVILDDRNERPGAMFADWGLIGAPFRVVIGDRGLVDSQVEFKGRTDAESQNIPL 561 Query: 432 EEV 434 ++ Sbjct: 562 TQI 564 >gi|296135005|ref|YP_003642247.1| prolyl-tRNA synthetase [Thiomonas intermedia K12] gi|295795127|gb|ADG29917.1| prolyl-tRNA synthetase [Thiomonas intermedia K12] Length = 576 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 122/229 (53%), Positives = 166/229 (72%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ +++P DA++ S LMLR GMI +H+ G+YS+LPLG +++ V AI+REE Sbjct: 1 MKISRFFISTQKDDPADADVRSQALMLRAGMIKKHAAGLYSYLPLGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW E+GR D +G E+LR+ DR+D+ + PT EEV+TD+ RS Sbjct: 61 MNRAGAIELLMPVVQPAELWQETGRLDQFGPELLRIKDRHDRDFVIQPTSEEVVTDLVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++S+R LP FY IQ KFRDE RPRFGVMR+REF MKDAYSFD E ++ SY MF + Sbjct: 121 EVRSWRQLPLNFYHIQTKFRDERRPRFGVMRAREFTMKDAYSFDRDFEAAQISYRVMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF R G + + A+SG IGG LSHEF V+ADTGE + +C DF Sbjct: 181 YVRIFQRFGFEFRAVAADSGAIGGSLSHEFHVIADTGEDAIAYCEGSDF 229 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 91/266 (34%), Positives = 129/266 (48%), Gaps = 33/266 (12%) Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAES-------------GPIGGDLSHEFIVLADTGE 218 H+ N++ VS L GL S M E+ GPIG H V+AD Sbjct: 305 HAVNEVKVSKL-----AGLASTRMATEAEIVATFGTPPGYLGPIG--TVHPVRVIADR-- 355 Query: 219 TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 + DF + + DF + P +D+ N + D P+ K V Sbjct: 356 ----TVANMSDFVVGANAVDF----HYTGVNWGRDLPEPEVADIRNVQAGDPSPDGKGVL 407 Query: 279 A--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + RGIEVGH+FY GTKYS M ATF GK ++MG YGIG R++ A IE +HD K Sbjct: 408 SICRGIEVGHVFYLGTKYSAAMGATFLDDKGKSQTLEMGCYGIGITRILGACIEQNHDAK 467 Query: 337 GIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 G+IWPD++APF + I + R A + +YA L G DV DD GE+ G Sbjct: 468 GMIWPDAIAPFTAVICPIGYDRSEAVRQAADALYAELIAAGVDVALDDRGERPGVMLGDW 527 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHR 421 +L+G P ++++ + ++ VE +HR Sbjct: 528 ELIGVPHRMVISDRGLAAGTVEYQHR 553 >gi|33603207|ref|NP_890767.1| prolyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|81836865|sp|Q7WFN9|SYP_BORBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33568838|emb|CAE34596.1| prolyl-tRNA synthetase [Bordetella bronchiseptica RB50] Length = 576 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 122/218 (55%), Positives = 159/218 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P +AEIASH+LM R GMI + + GIY+++PLG K + + I+REE Sbjct: 1 MRASKYHLNTLKEAPAEAEIASHQLMTRAGMIRKLAGGIYTYMPLGLKVIRKIEGIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q A+LW+ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNAAGAIELLMPVVQPAELWMESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G++ SY+ M+ + Sbjct: 121 EIQSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGAQRSYDIMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ + A++G IGG SHEF V+ADTGE Sbjct: 181 YQRIFQRLGLEFRAVAADTGSIGGSRSHEFQVIADTGE 218 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 97/166 (58%), Gaps = 3/166 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGH+F+ GTKYS + ATF +GK +QMG Sbjct: 387 VADLRNVVEGDPSPDGKGALSIQRGIEVGHVFFLGTKYSEALKATFLDDNGKPAVLQMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +HD +GIIWP ++AP+++ + + + RD +Y L Sbjct: 447 YGIGVTRIVGAAIEQNHDARGIIWPRAIAPYEVVICPVGWGKSETVRDTALALYEALRAR 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD + G FA +L+G PL+V VG + +++ VE++ R Sbjct: 507 GVDVMLDDRDSRPGVMFAEWELIGVPLRVTVGERGLNEGVVELQAR 552 >gi|294339022|emb|CAZ87369.1| proline tRNA synthetase [Thiomonas sp. 3As] Length = 576 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/229 (53%), Positives = 166/229 (72%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ +++P DA++ S LMLR GMI +H+ G+YS+LPLG +++ V AI+REE Sbjct: 1 MKISRFFISTQKDDPADADVRSQALMLRAGMIKKHAAGLYSYLPLGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW E+GR D +G E+LR+ DR+D+ + PT EEV+TD+ RS Sbjct: 61 MNRAGAIELLMPVVQPAELWQETGRLDQFGPELLRIKDRHDRDFVIQPTSEEVVTDLVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++S+R LP FY IQ KFRDE RPRFGVMR+REF MKDAYSFD E ++ SY MF + Sbjct: 121 EVRSWRQLPLNFYHIQTKFRDERRPRFGVMRAREFTMKDAYSFDRDFEAAQISYRVMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-SKDF 227 Y+RIF R G + + A+SG IGG LSHEF V+ADTGE + +C DF Sbjct: 181 YVRIFQRFGFEFRAVAADSGAIGGSLSHEFHVIADTGEDAIAYCEGSDF 229 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 91/266 (34%), Positives = 129/266 (48%), Gaps = 33/266 (12%) Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAES-------------GPIGGDLSHEFIVLADTGE 218 H+ N++ VS L GL S M E+ GPIG H V+AD Sbjct: 305 HAVNEVKVSKL-----AGLASTRMATEAEIVATFGTPPGYLGPIG--TVHPVRVIADR-- 355 Query: 219 TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 + DF + + DF + P +D+ N + D P+ K V Sbjct: 356 ----TVANMSDFVVGANAVDF----HYTGVNWGRDLPEPEVADIRNVQAGDPSPDGKGVL 407 Query: 279 A--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + RGIEVGH+FY GTKYS M ATF GK ++MG YGIG R++ A IE +HD K Sbjct: 408 SICRGIEVGHVFYLGTKYSAAMGATFLDDKGKSQTLEMGCYGIGITRILGACIEQNHDAK 467 Query: 337 GIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 G+IWPD++APF + I + R A + +YA L G DV DD GE+ G Sbjct: 468 GMIWPDAIAPFTAVICPIGYDRSEAVRQAADALYAELIAAGVDVALDDRGERPGVMLGDW 527 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHR 421 +L+G P ++++ + ++ VE +HR Sbjct: 528 ELIGVPHRMVISDRGLAAGTVEYQHR 553 >gi|161621298|ref|YP_585241.2| prolyl-tRNA synthetase [Cupriavidus metallidurans CH34] gi|114152237|sp|Q1LIQ4|SYP_RALME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 573 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/224 (54%), Positives = 162/224 (72%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYNYMPVGLRVIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+S+P +Q A+LW E+GR+D G E+LRL DR+++ PT EEV+TDI R+ Sbjct: 61 MNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKDRHERDFAVQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD +G K SY M+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDIDGLKASYQNMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y+RIF R GL+ + A++G IGG SHEF V+ADTGE V+C Sbjct: 181 YVRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYC 224 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 102/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D+ P+ K RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 381 PEPAVADLRNVVAGDASPDGKGTLDICRGIEVGHVFMLGTRYSESMNATFLDENGKTQPM 440 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE ++D +GIIWP ++APF + + + ++ + ++I+A Sbjct: 441 QMGCYGIGVTRILGAAIEQNYDERGIIWPAAIAPFAVVVCPVGYDRNEAVKAEADRIHAE 500 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G FA +L+G P +V+VG + + + KVE + R Sbjct: 501 LLAAGVDVILDDRGERPGVMFADWELIGVPHRVVVGDRGLKEGKVEYQGR 550 >gi|33594237|ref|NP_881881.1| prolyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|81836185|sp|Q7VTZ8|SYP_BORPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33564312|emb|CAE43613.1| prolyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|332383651|gb|AEE68498.1| prolyl-tRNA synthetase [Bordetella pertussis CS] Length = 576 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/218 (55%), Positives = 159/218 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P +AEIASH+LM R GMI + + GIY+++PLG K + + I+REE Sbjct: 1 MRASKYHLNTLKEAPAEAEIASHQLMTRAGMIRKLAGGIYTYMPLGLKVIRKIEGIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q A+LW+ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNAAGAIELLMPVVQPAELWMESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G++ SY+ M+ + Sbjct: 121 EIQSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGAQRSYDIMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ + A++G IGG SHEF V+ADTGE Sbjct: 181 YQRIFQRLGLEFRAVAADTGSIGGSRSHEFQVIADTGE 218 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 97/166 (58%), Gaps = 3/166 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGH+F+ GTKYS + ATF +GK +QMG Sbjct: 387 VADLRNVVEGDPSPDGKGALSIQRGIEVGHVFFLGTKYSEALKATFLDDNGKPAVLQMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +HD +GIIWP ++AP+++ + + + RD +Y L Sbjct: 447 YGIGVTRIVGAAIEQNHDARGIIWPRAIAPYEVVICPVGWGKSETVRDTALALYEALRAR 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD + G FA +L+G PL+V VG + +++ VE++ R Sbjct: 507 GVDVMLDDRDSRPGVMFAEWELIGVPLRVTVGERGLNEGVVELQAR 552 >gi|145297802|ref|YP_001140643.1| prolyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|166980094|sp|A4SJ23|SYP_AERS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|142850574|gb|ABO88895.1| prolyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 574 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 117/218 (53%), Positives = 154/218 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L + I+REE Sbjct: 1 MRTSQYLLSTLKETPSDAEVVSHQLMLRAGMIRKLASGMYAWLPSGLRVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q A+LW ESGR+D YG E+ RL DR+++ + GPTHEEV+T + R Sbjct: 61 MNNAGAIEVSMPVVQPAELWQESGRWDDYGPELCRLTDRHNRPFVLGPTHEEVITSLVRY 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + +Y +M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHIDKASLIETYERMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y F R+GL P++A++G IGG SHEF VLA++GE Sbjct: 181 YCAAFTRMGLNFRPVQADTGSIGGTGSHEFQVLAESGE 218 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 119/218 (54%), Gaps = 20/218 (9%) Query: 223 CSKDFMDFPIPSENTDFD----DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 C + F + N D D ++ L ++VE +P + K + Sbjct: 363 CGANETGFHLTGANWDRDIATYEVADLRNVVEGDPSPCG---------------QGKLLL 407 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIEVGHIF GTKYS M A+ GK ++MG YGIG R+VAA IE ++D GI Sbjct: 408 KRGIEVGHIFQLGTKYSEAMKASVLNEGGKSVTMEMGCYGIGVSRLVAAAIEQNNDQYGI 467 Query: 339 IWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWPD++APF+++++ + H + + ++ YA L G DV +DD E+ G FA +L Sbjct: 468 IWPDAIAPFEVAIVPMNMHKSERVAEQAQQFYAELKAAGVDVLFDDRKERPGVMFADMEL 527 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LG P +++G + + + VE K R +G ++++++ E++ Sbjct: 528 LGVPHAIVIGDRGLDNGVVEYKCRRSGEKQEVAITEIV 565 >gi|153001389|ref|YP_001367070.1| prolyl-tRNA synthetase [Shewanella baltica OS185] gi|166980156|sp|A6WQB8|SYP_SHEB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|151366007|gb|ABS09007.1| prolyl-tRNA synthetase [Shewanella baltica OS185] Length = 571 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/243 (50%), Positives = 167/243 (68%), Gaps = 8/243 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y I R+GL P+ A++G IGG +SHEF VLA +GE + S + + P+ Sbjct: 181 YSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIEKAESPV 240 Query: 233 PSE 235 P+E Sbjct: 241 PTE 243 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PTAQVADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE + D +GIIWP+++APF + ++ + H D E++Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNFDDRGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L++ G DV DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LNEAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPF 558 Query: 432 EEVINY 437 ++++++ Sbjct: 559 DQLLDF 564 >gi|71906284|ref|YP_283871.1| prolyl-tRNA synthetase [Dechloromonas aromatica RCB] gi|114152186|sp|Q47ID0|SYP_DECAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71845905|gb|AAZ45401.1| Prolyl-tRNA synthetase, bacterial [Dechloromonas aromatica RCB] Length = 576 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/224 (54%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F L+E P DAE+ S K+MLR G I + + GIY+W+PLG + L V I+REE Sbjct: 1 MRTSQFFFTTLKEAPADAEVISQKMMLRAGYIKRAAAGIYTWMPLGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E+LR DR+ + + GPTHEEV+TD+ R Sbjct: 61 MNNAGALELLMPAVQPAELWQESGRWEQYGPELLRFKDRHQREFVIGPTHEEVITDVVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFGVMR REFLMKD YSF + + K Y M+ + Sbjct: 121 DVKSYRQLPIHLYQIQTKFRDEIRPRFGVMRGREFLMKDGYSFHASFDDLKREYGNMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF RLGLK + A++G IGG SHEF VLAD+GE + FC Sbjct: 181 YSRIFSRLGLKFRAVAADTGSIGGTGSHEFHVLADSGEDDIAFC 224 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/171 (36%), Positives = 96/171 (56%), Gaps = 3/171 (1%) Query: 255 PYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D+ P + K RGIEVGHIF KY+ ++ + GK + Sbjct: 383 PEPEVFDIRNVVAGDASPDGQGKLEILRGIEVGHIFQLRQKYAEALNCVYLDDSGKSQIM 442 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 +MG YGIG R+V A IE +D KGII P ++APF++ ++ + H + + + +++YA Sbjct: 443 EMGCYGIGVSRIVGAAIEQGNDDKGIILPPAIAPFEVCIVPMGYHKSEAVKASADQLYAD 502 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 L K+G DV DD E+ G FA +L+G P +V++G + + D E K R+ Sbjct: 503 LKKIGVDVVLDDRNERPGVMFADMELIGIPHRVVIGERGLKDGLFEYKSRI 553 >gi|94267977|ref|ZP_01291052.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1] gi|93451782|gb|EAT02540.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1] Length = 572 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 121/225 (53%), Positives = 157/225 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ LP L+E+P +AE+ SHKLMLR GMI + + G+YS+LPLG A+ V I+R+E Sbjct: 1 MRFSQLLLPTLKEDPAEAEVISHKLMLRAGMIRKLTSGVYSYLPLGLAAIRKVEEIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q ADLW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R Sbjct: 61 MNRAGAQELLLPMVQPADLWRESGRWEKYGPELLRFQDRHQRESCLGPTHEEVITDLVRL 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SYR+LP YQIQ KFRDE+RPRFG+MR REF+MKD YSFD + +Y KM + Sbjct: 121 NVHSYRDLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFDADEAAADETYRKMQAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF R GL + A++G IGG SHEF+VLA TGE V + Sbjct: 181 YQRIFARCGLAFRAVEADTGSIGGSFSHEFMVLAATGEDLVVTCQ 225 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 92/145 (63%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G +YS ++ATF +G+ + MG +GIG R VAA IE +HD GII Sbjct: 402 RGIEVGHIFKLGNEYSRALNATFLDKEGQSRHFIMGCFGIGVSRTVAAAIEQNHDRDGII 461 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +APF++ L+N+ D +++Y L+ G +V DD E+ G++F ADL+G Sbjct: 462 FPLPIAPFQVILLNLTPKDPEISAEAQRLYRELTAAGLEVLLDDRNERPGAKFKDADLIG 521 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTG 424 P++++VG +F + +EI++R G Sbjct: 522 IPIRLMVGKRFAQEGLLEIRNRADG 546 >gi|160876111|ref|YP_001555427.1| prolyl-tRNA synthetase [Shewanella baltica OS195] gi|189083513|sp|A9KVR8|SYP_SHEB9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160861633|gb|ABX50167.1| prolyl-tRNA synthetase [Shewanella baltica OS195] gi|315268308|gb|ADT95161.1| prolyl-tRNA synthetase [Shewanella baltica OS678] Length = 571 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/243 (50%), Positives = 167/243 (68%), Gaps = 8/243 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y I R+GL P+ A++G IGG +SHEF VLA +GE + S + + P+ Sbjct: 181 YSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIEKAESPV 240 Query: 233 PSE 235 P+E Sbjct: 241 PTE 243 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 109/186 (58%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ + ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PLAQVADIRNVVEGEPTPDGSGIYAMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE + D +GIIWP+++APF + ++ + H D E++Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNFDDRGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L++ G DV DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LNEAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPF 558 Query: 432 EEVINY 437 ++++++ Sbjct: 559 DQLLDF 564 >gi|126175060|ref|YP_001051209.1| prolyl-tRNA synthetase [Shewanella baltica OS155] gi|166980155|sp|A3D6H7|SYP_SHEB5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|125998265|gb|ABN62340.1| prolyl-tRNA synthetase [Shewanella baltica OS155] Length = 571 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/243 (50%), Positives = 167/243 (68%), Gaps = 8/243 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y I R+GL P+ A++G IGG +SHEF VLA +GE + S + + P+ Sbjct: 181 YSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIEKAESPV 240 Query: 233 PSE 235 P+E Sbjct: 241 PTE 243 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 3/185 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PTAQVADIRNVVEGEPTPDGSGTYAMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE + D +GIIWP+++APF + ++ + H D E++Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNFDDRGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L++ G DV DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LNEAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPF 558 Query: 432 EEVIN 436 +++++ Sbjct: 559 DQLLD 563 >gi|332534597|ref|ZP_08410430.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332035947|gb|EGI72427.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 574 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/224 (54%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYILATLKETPSDAEIVSHQLMLRAGMIRRVASGLYTWLPSGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GAIEM +P +Q ADLW ESGR++ +G E++R DR+++ GPTHEEV+TD R Sbjct: 61 MDKAGAIEMLMPVIQPADLWEESGRWNEFGPELMRFTDRHNRTFALGPTHEEVITDFVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQ+Q K RDE RPRFGVMR+REF MKDAYSF L+ E +Y M + Sbjct: 121 EISSYKQLPVTLYQVQTKVRDERRPRFGVMRAREFTMKDAYSFHLSEECLDATYQAMHKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL P+ A++G IGG LSHEF VLA++GE + S Sbjct: 181 YCNIFERLGLDYRPVLADTGSIGGSLSHEFHVLAESGEDAIAFS 224 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 1/158 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M A GK+ + MG YGIG R+VAA IE ++D GII Sbjct: 409 RGIEVGHIFQLGTKYSEAMKAGVLNEGGKNQTMTMGCYGIGVSRIVAAAIEQNNDQYGII 468 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP S+APF ++++ + H D +Y L G DV +DD E+ G F +L+ Sbjct: 469 WPQSIAPFDLAIVPMNMHKSHRIPDIANNLYQGLKDAGLDVLFDDRKERPGVMFNDMELI 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P +++G + + ++KVE+K+R TG + + ++ I+ Sbjct: 529 GVPFTLVIGERNLDENKVELKNRRTGEKLMIDIDTAID 566 >gi|94265181|ref|ZP_01288943.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1] gi|93454322|gb|EAT04629.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1] Length = 572 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 121/225 (53%), Positives = 157/225 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ LP L+E+P +AE+ SHKLMLR GMI + + G+YS+LPLG A+ V I+R+E Sbjct: 1 MRFSQLLLPTLKEDPAEAEVISHKLMLRAGMIRKLTSGVYSYLPLGLAAIRKVEEIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q ADLW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R Sbjct: 61 MNRAGAQELLLPMVQPADLWRESGRWEKYGPELLRFQDRHQRESCLGPTHEEVITDLVRL 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SYR+LP YQIQ KFRDE+RPRFG+MR REF+MKD YSFD + +Y KM + Sbjct: 121 NVHSYRDLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFDADEAAADETYRKMQAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF R GL + A++G IGG SHEF+VLA TGE V + Sbjct: 181 YQRIFARCGLAFRAVEADTGSIGGSFSHEFMVLAATGEDLVVTCQ 225 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 92/145 (63%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G +YS ++ATF +G+ + MG +GIG R VAA IE +HD GII Sbjct: 402 RGIEVGHIFKLGNEYSRALNATFLDKEGQSRHFIMGCFGIGVSRTVAAAIEQNHDRDGII 461 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +APF++ L+N+ D +++Y L+ G +V DD E+ G++F ADL+G Sbjct: 462 FPLPIAPFQVILLNLTPKDPEISAEAQRLYQELTAAGLEVLLDDRNERPGAKFKDADLIG 521 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTG 424 P++++VG +F + +EI++R G Sbjct: 522 IPIRLMVGKRFAQEGLLEIRNRADG 546 >gi|291398822|ref|XP_002716008.1| PREDICTED: prolyl-tRNA synthetase (mitochondrial)(putative) [Oryctolagus cuniculus] Length = 478 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 158/426 (37%), Positives = 227/426 (53%), Gaps = 39/426 (9%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 S +LML+ G+I S G Y LP +AL+ + +I +E G ++S+P+L A+LW Sbjct: 73 SQRLMLQVGLILPASPGCYHLLPYTVRALEKLVRLIDQEMQAVGGQKVSLPSLSPAELWR 132 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPFTFYQIQLKFR 140 + R+D GKE+LRL DR+ K GPTHEEV+T + S SY+ LPF YQ+ KFR Sbjct: 133 ATQRWDLMGKELLRLQDRHGKEYCLGPTHEEVVTALVASQKNLSYKQLPFLLYQVTRKFR 192 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 DE RPRFG++R REF MKD Y+FD +PE ++ +Y + +Y +F RLGL+ I +A+ G Sbjct: 193 DEPRPRFGLLRGREFYMKDMYTFDSSPEAARQTYGLVCDAYCSLFSRLGLQVIKAQADVG 252 Query: 201 PIGGDLSHEFIVLADTGETQ--VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAA 258 IGG +SHEF + + GE Q V S F S N + D N V Q P Sbjct: 253 SIGGTMSHEFQLPVEVGEDQLAVCPSCGF------SANVETLDSSQTNCPVCQ--GPLTE 304 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 T RGIEVGH FY GTKYS A F A+GK +MG YG Sbjct: 305 T--------------------RGIEVGHTFYLGTKYSSIFRAQFTNAEGKPCLAEMGCYG 344 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACEKIYARLSKV- 375 +G R++AA IE + WP +AP+++ LI K + + + E++Y +++ Sbjct: 345 LGVSRILAAAIEVLATEDSVRWPGLLAPYQVCLIPPKKGSKEAAATELTERLYDHIAEAV 404 Query: 376 ----GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV-EIKHRLTGIREDMS 430 G V D IGS+ AD LG+P V+ G + + + E+ + TG + ++ Sbjct: 405 PQLHGELVLDDRTHLTIGSRLKDADKLGYPFVVVAGKRALEEPACFEVWCQNTGEQLFLT 464 Query: 431 LEEVIN 436 E V++ Sbjct: 465 REGVLD 470 >gi|217972680|ref|YP_002357431.1| prolyl-tRNA synthetase [Shewanella baltica OS223] gi|254782915|sp|B8EDD0|SYP_SHEB2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|217497815|gb|ACK46008.1| prolyl-tRNA synthetase [Shewanella baltica OS223] Length = 571 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/243 (50%), Positives = 167/243 (68%), Gaps = 8/243 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y I R+GL P+ A++G IGG +SHEF VLA +GE + S + + P+ Sbjct: 181 YSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIEKAESPV 240 Query: 233 PSE 235 P+E Sbjct: 241 PTE 243 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PTAQVADIRNVVEGEPTPDGSGTYAMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE + D +GIIWP+++APF + ++ + H D E++Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNFDDRGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L++ G DV DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LNEAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPF 558 Query: 432 EEVINY 437 ++++++ Sbjct: 559 DQLLDF 564 >gi|317402479|gb|EFV83047.1| ProS protein [Achromobacter xylosoxidans C54] Length = 576 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/226 (53%), Positives = 163/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y + L+E P +AE+ASH+LM R GMI + + GIY+++PLG K + V AI+REE Sbjct: 1 MRASNYHINTLKEAPSEAEVASHQLMTRAGMIRKLAGGIYTYMPLGLKIIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GAIE+ +P +Q A+LW+ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNASGAIELLMPVVQPAELWMESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G++ SY+ M+ + Sbjct: 121 EIHSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGAQKSYDNMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y+RIF RLGL+ + A++G IGG SHEF V+ADTGE + + D Sbjct: 181 YMRIFGRLGLEFRAVAADTGSIGGTRSHEFQVIADTGEDLLVYNAD 226 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 96/166 (57%), Gaps = 3/166 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGH+FY G KYS + ATF GK ++MG Sbjct: 387 VADLRNVVAGDPSPDGKGTLSIQRGIEVGHVFYLGKKYSEALKATFLDETGKPAVLEMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +HD +GIIWP ++APF++ + + + R+ K+Y L Sbjct: 447 YGIGITRIVGAAIEQNHDDRGIIWPRAIAPFEVVICPVGWGKSETVRNTSLKLYESLLAR 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD + G FA +L+G PL+V VG + ++D VE++ R Sbjct: 507 GVDVILDDRDARPGVMFAEWELIGAPLRVTVGERGLNDGVVELQAR 552 >gi|152976185|ref|YP_001375702.1| prolyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189083487|sp|A7GRE9|SYP_BACCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152024937|gb|ABS22707.1| prolyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 566 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 128/253 (50%), Positives = 168/253 (66%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LPLG K L V IIREE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPLGLKVLHKVEHIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P LQ+A+LW ESGR+ SYG E++R+ DRND+ G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPALQAAELWQESGRWYSYGSELMRMKDRNDREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+++F + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/159 (43%), Positives = 96/159 (60%), Gaps = 1/159 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + V R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDVQREVAENIYTSLQEQGYEVLLDDRTERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P++V VG K + VE+K R T ++ +E++ Y Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEDLHTY 560 >gi|93355883|gb|ABF09972.1| prolyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 614 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/224 (54%), Positives = 162/224 (72%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V I+REE Sbjct: 42 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYNYMPVGLRVIRKVENIVREE 101 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+S+P +Q A+LW E+GR+D G E+LRL DR+++ PT EEV+TDI R+ Sbjct: 102 MNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKDRHERDFAVQPTSEEVVTDIART 161 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD +G K SY M+ + Sbjct: 162 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDIDGLKASYQNMYDA 221 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y+RIF R GL+ + A++G IGG SHEF V+ADTGE V+C Sbjct: 222 YVRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYC 265 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 102/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D+ P+ K RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 422 PEPAVADLRNVVAGDASPDGKGTLDICRGIEVGHVFMLGTRYSESMNATFLDENGKTQPM 481 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE ++D +GIIWP ++APF + + + ++ + ++I+A Sbjct: 482 QMGCYGIGVTRILGAAIEQNYDERGIIWPAAIAPFAVVVCPVGYDRNEAVKAEADRIHAE 541 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G FA +L+G P +V+VG + + + KVE + R Sbjct: 542 LLAAGVDVILDDRGERPGVMFADWELIGVPHRVVVGDRGLKEGKVEYQGR 591 >gi|220934299|ref|YP_002513198.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] gi|254782924|sp|B8GPP4|SYP_THISH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219995609|gb|ACL72211.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] Length = 574 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/230 (53%), Positives = 164/230 (71%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++ L L+E P DAE+ SH+LMLR GMI + + G+YSW PLG + L V ++R+E Sbjct: 1 MRATRFPLATLKETPADAEVISHQLMLRAGMIRRLASGLYSWTPLGLRVLRKVEGLVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+ + +GPTHEEV+TD R Sbjct: 61 MDRAGALELLMPAVQPAELWQESGRWEQYGPELLRLKDRHMREFCFGPTHEEVITDYVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP +YQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + + K +Y +M + Sbjct: 121 EVKSYRQLPVNYYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHVDEDSLKETYARMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y RIF R GL + A++G IGG+ SHEF VLAD+GE + S D D+ Sbjct: 181 YTRIFTRCGLDFRAVLADTGSIGGNASHEFHVLADSGEDAIAFS-DVSDY 229 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 101/165 (61%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M AT G+ V MG YGIG RVVAA IE +HD +GII Sbjct: 407 RGIEVGHIFQLGRKYSEAMGATVLDEQGRSLVVTMGCYGIGVSRVVAAAIEQNHDAQGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP+++APF ++L I A Q R+A + +Y RL G +VF+DD G + G+ FA +L+ Sbjct: 467 WPEALAPFTVALCPINAQKSQRLREAADALYERLLNAGFEVFYDDRGLRPGAMFADMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P ++++G + + ++E K R ++L+ V+++ R + Sbjct: 527 GIPHRLVLGERGLDAGEIEYKGRRDTDTTQVALDGVLDFLRQRMN 571 >gi|304409899|ref|ZP_07391518.1| prolyl-tRNA synthetase [Shewanella baltica OS183] gi|307302394|ref|ZP_07582152.1| prolyl-tRNA synthetase [Shewanella baltica BA175] gi|304351308|gb|EFM15707.1| prolyl-tRNA synthetase [Shewanella baltica OS183] gi|306914432|gb|EFN44853.1| prolyl-tRNA synthetase [Shewanella baltica BA175] Length = 571 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/243 (50%), Positives = 167/243 (68%), Gaps = 8/243 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------DFMDFPI 232 Y I R+GL P+ A++G IGG +SHEF VLA +GE + S + + P+ Sbjct: 181 YSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIEKAESPV 240 Query: 233 PSE 235 P+E Sbjct: 241 PTE 243 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PTAQVADIRNVVEGEPTPDGSGTYAMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YG+G R+VAA IE + D +GIIWP+++APF + ++ + H D E++Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNFDDRGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L++ G DV DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LNEAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPF 558 Query: 432 EEVINY 437 ++++++ Sbjct: 559 DQLLDF 564 >gi|307822387|ref|ZP_07652619.1| prolyl-tRNA synthetase [Methylobacter tundripaludum SV96] gi|307736953|gb|EFO07798.1| prolyl-tRNA synthetase [Methylobacter tundripaludum SV96] Length = 569 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/226 (53%), Positives = 164/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++ L ++E P DAEIASH+LM+R G+I + + G+Y+WLPLG + + V I REE Sbjct: 1 MRTTQFPLNTVKETPADAEIASHQLMIRAGLIRKLAAGLYTWLPLGLRVMRKVEKITREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +TGA+E+ +P LQ A+LW E+GR++ YG E+ RL DR+D+ GPTHEE++TD+ R+ Sbjct: 61 MEKTGALEVLMPGLQPAELWQETGRWEQYGPELARLKDRHDRDFCLGPTHEEIITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T+YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF L E + +Y M + Sbjct: 121 EIKSYKQLPITYYQIQSKFRDEIRPRFGVMRSREFIMKDAYSFHLDHESLQVTYEAMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+ LGL + A+SG IGG +SHEF VLAD+GE + S D Sbjct: 181 YTNIFNHLGLNFRAVIADSGSIGGAVSHEFHVLADSGEDAIAFSTD 226 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 97/165 (58%), Gaps = 1/165 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGHIF GTKYS M A GK+ + MG YGIG RVVAA IE +HD KGI Sbjct: 404 ARGIEVGHIFQLGTKYSEAMKAGVINEGGKNQIMTMGCYGIGISRVVAAAIEQNHDDKGI 463 Query: 339 IWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWP ++APF+++L + H + ++A EK+Y L G DV +DD + G F+ +L Sbjct: 464 IWPTNLAPFQVALCPMNMHKSERLKEASEKLYQDLLAAGIDVLFDDRKVRAGFMFSDMEL 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +G P ++VG + + VE K R E++ ++I++ + Sbjct: 524 IGIPHCIVVGDRGLDSGTVEYKARTAEANEEIPFADIIDFLKAKL 568 >gi|257125504|ref|YP_003163618.1| prolyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] gi|257049443|gb|ACV38627.1| prolyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] Length = 570 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 141/305 (46%), Positives = 188/305 (61%), Gaps = 15/305 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK FL +E P++A+I SH+LMLR MI+Q ++G+Y++LP G + L + I REE Sbjct: 1 MRLSKAFLKTYKEAPKEAQIVSHQLMLRAFMINQLTRGVYTYLPFGYRVLKKIENITREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ A LW ESGR+ +YG E++RL DRN++ GPTHEEV+TD+ R Sbjct: 61 MDRAGAQELLMPVLQPASLWEESGRWFAYGPELMRLKDRNEREFSLGPTHEEVITDVVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LPF YQIQ KFRDE+RPRFG+MR REF+MKD YSF LT E Y M + Sbjct: 121 SISSYKELPFNVYQIQTKFRDEMRPRFGLMRGREFVMKDGYSFHLTQESLDEEYLNMKDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL + A++G IGGD SHEF+VLA++GE + S D D+ E Sbjct: 181 YSRIFERMGLNYRAVEADTGSIGGDASHEFMVLAESGEDDILYS-DSSDYAANVEKA--T 237 Query: 241 DIISLNSIVEQ------WTAPYAAT-SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 II L E+ P A T D+ N F ++P+ K V A + + I G K Sbjct: 238 SIIELKESNEEKLPKELVETPNAKTIEDLAN---FLNIPKEKTVKA--VMLKEILEDGEK 292 Query: 294 YSLPM 298 + L + Sbjct: 293 FVLAL 297 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 76/187 (40%), Positives = 114/187 (60%), Gaps = 3/187 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 Y +D+ K D P+ K V ARGIEVGHIF G KYS ++AT +GK +++ Sbjct: 381 YDLVADIRTAKAGDLSPDGKGVLKIARGIEVGHIFKLGEKYSKALNATVLDENGKQQFIK 440 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YG+G R+++A IE +HD GIIWP ++AP+ + +I D+ + EK+Y L+ Sbjct: 441 MGCYGMGMSRIISAAIEQNHDEYGIIWPKAIAPYHVDVIIANMKDETQVNIGEKLYNELN 500 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + + DD E+ G +F ADL+GFPL+++VG K +D VE+K R TG D+ +EE Sbjct: 501 QNKIETVLDDRNERAGFKFKDADLIGFPLKIVVG-KGAADGIVEVKDRKTGESTDVKVEE 559 Query: 434 VINYASH 440 V+N+ + Sbjct: 560 VLNFVKN 566 >gi|330502208|ref|YP_004379077.1| prolyl-tRNA synthetase [Pseudomonas mendocina NK-01] gi|328916494|gb|AEB57325.1| prolyl-tRNA synthetase [Pseudomonas mendocina NK-01] Length = 571 Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 128/278 (46%), Positives = 177/278 (63%), Gaps = 20/278 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V ++REE Sbjct: 1 MRTSQFLLSTLKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR+ YG E+LR+ DR+D+ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPAIQPAELWQESGRWVQYGPELLRIKDRHDREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REFLMKDAYSF + +Y++M + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF---------- 230 Y +F RLGL P++A++G IGG SHEF VLAD+GE + S D D+ Sbjct: 181 YCNVFTRLGLNFRPVQADTGSIGGTGSHEFHVLADSGEDDIAFS-DSSDYAANIEKAEAL 239 Query: 231 ------PIPSEN---TDFDDIISLNSIVEQWTAPYAAT 259 P P+E D D ++ ++VE + P T Sbjct: 240 PREKVRPAPTEELRLVDTPDAKTITALVEGFNLPIEKT 277 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 24/240 (10%) Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 +L +F++ A+ + F D P+P+ + L ++VE +P Sbjct: 352 ELMSDFVIGANIDDKHYFGVNWERDLPVPT-------VADLRNVVEGDPSPDG------- 397 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 + V RGIEVGHIF GTKYS M+ G +GK + MG YGIG RV Sbjct: 398 --------QGTLVIKRGIEVGHIFQLGTKYSEAMNCQVLGENGKPVTLTMGCYGIGVSRV 449 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 VAA IE + D +GI W D++APF I+L+ ++ + R+A +K+YA L+ G DV DD Sbjct: 450 VAAAIEQNFDERGIRWNDALAPFHIALVPLRYETEQVREATDKLYAELTAAGFDVLLDDR 509 Query: 385 GEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 ++ G +FA +L+G P +V+V + +++ K+E K R + + L E++++ R Sbjct: 510 DKKTSPGIKFADMELIGIPHRVVVSDRGLAEGKLEYKSRAETEAQAVPLAEILSFLQARI 569 >gi|299065636|emb|CBJ36808.1| Proline--tRNA ligase [Ralstonia solanacearum CMR15] Length = 574 Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 163/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + G+Y+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGLYTYMPVGLRVIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GA+E+ +P +Q A+LW E+GR+D G EM+R+ DR+++ ++ PT EEV+TDI R+ Sbjct: 61 MNASGAVEVLMPVVQPAELWQETGRWDKMGDEMMRVKDRHERDLVIQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KM+ + Sbjct: 121 EIRSYKQMPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAEGLKVSYEKMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + A++G IGG SHEF V+ADTGE + S D Sbjct: 181 YTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYSPD 226 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 103/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A D+ N D P+ K A RGIEVGH+F GT+YS MSATF +GK + Sbjct: 382 PEAEVYDLRNVVAGDPSPDGKGTLALCRGIEVGHVFMLGTRYSESMSATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + + R ++++A Sbjct: 442 MMGCYGIGITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G+ FA +L+G P +V+VG + + + K+E++ R Sbjct: 502 LAAAGIDVILDDRGERPGAMFADWELIGVPFRVVVGERGLKEGKLELQGR 551 >gi|239994929|ref|ZP_04715453.1| prolyl-tRNA synthetase [Alteromonas macleodii ATCC 27126] Length = 440 Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLATQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPSGLRVLNKVANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW ESGR++ YG E+LR+ DR+ + + GPTHEEV+T + R+ Sbjct: 61 MNKAGAIEVLMPVVQPADLWEESGRWEEYGPELLRIKDRHQRDFVLGPTHEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE+RPRFG+MR REF MKDAYSF L + +Y KM+ + Sbjct: 121 EISSYKQLPLNLYQIQTKFRDEVRPRFGIMRGREFTMKDAYSFHLEDSCLEETYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R+GL + A+SG IGG+ SHEF VLA +GE + S D Sbjct: 181 YCNIFSRMGLDFRAVIADSGSIGGNHSHEFHVLAASGEDDIAFSSD 226 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 D+ N D+ P+ K RGIEVGHIF G+KYS M+ GK Sbjct: 389 DIRNVVAGDASPDGKGTLDIKRGIEVGHIFQLGSKYSEAMNCGVLSESGK 438 >gi|145588388|ref|YP_001154985.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189083506|sp|A4SVA7|SYP_POLSQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145046794|gb|ABP33421.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 580 Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 129/249 (51%), Positives = 173/249 (69%), Gaps = 8/249 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ FL L+E P DAE+ SHKLM+R G+I + S GIY++LPLG K + V IIREE Sbjct: 1 MKASQSFLATLKEAPSDAEVVSHKLMVRAGLIRKISAGIYNYLPLGLKVIRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW E+GR++ G E+LR+ DR+D+ + PT EEV+TD+ R+ Sbjct: 61 MNRAGAIELLMPMIQPAELWQETGRWEKMGPELLRIKDRHDRDFLIQPTSEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY MF + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFSMKDAYSFDRDTEGLKKSYQTMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC-SKDFMDFPIPSENTD 238 Y +IF R+GL+ + A++G IGG S EF V+ADTGE V+C S D+ + N + Sbjct: 181 YTQIFKRMGLEFRAVTADNGAIGGSGSQEFHVIADTGEDAIVYCPSSDY------AANLE 234 Query: 239 FDDIISLNS 247 + ++LN+ Sbjct: 235 AAESLALNA 243 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 104/183 (56%), Gaps = 3/183 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N + D P+ K V RGIEVGH+F GT+YS M T+ GK + Sbjct: 382 PEPLVLDIRNAVIGDPSPDGKGVVDICRGIEVGHVFQLGTRYSEAMGCTYLDQQGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE HD +GIIWP S+AP ++ + + + + AC++++ Sbjct: 442 VMGCYGIGVTRLLGAAIEQGHDERGIIWPISMAPVEVVICPMGYEKSEPVKAACDQLHDE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G+ FA +L+G P +V++G + ++DS+VE K R +++ L Sbjct: 502 LVAAGIDVILDDRNERPGAMFADWELIGAPFRVVIGDRGLADSQVEFKGRTDADSQNIPL 561 Query: 432 EEV 434 ++ Sbjct: 562 AQI 564 >gi|194290784|ref|YP_002006691.1| prolyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] gi|226699135|sp|B3R894|SYP_CUPTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|193224619|emb|CAQ70630.1| prolyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] Length = 573 Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 162/224 (72%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYNYMPIGLRVIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+S+P +Q A+LW E+GR+D G E+LRL DR+++ PT EEV+TDI RS Sbjct: 61 MNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKDRHERDFAVQPTSEEVVTDIARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD +G + SY M+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDTDGLRKSYENMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y+RIF R GL+ + A++G IGG SHEF V+A+TGE V+C Sbjct: 181 YVRIFRRFGLEFRAVAADNGAIGGSGSHEFHVIAETGEDAIVYC 224 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ + RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 381 PEPIVADLRNVVAGDASPDGQGTLEICRGIEVGHVFMLGTRYSESMNATFLDENGKTQPM 440 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE + D +GIIWP ++APF + + + + + ++I+A Sbjct: 441 QMGCYGIGITRILGAAIEQNFDERGIIWPAAIAPFAVVICPVGYDRSEAVKAEADRIHAE 500 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P +V+VG + + + KVE + R +S+ Sbjct: 501 LLAAGVDVILDDRGERPGVMFADWELIGVPHRVVVGDRGLKEGKVEYQGRRDAQATAVSV 560 Query: 432 EEVINYASHRFSN 444 EV+ + +N Sbjct: 561 AEVVGHVRSLLAN 573 >gi|307246760|ref|ZP_07528828.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255744|ref|ZP_07537547.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260196|ref|ZP_07541905.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852335|gb|EFM84572.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861304|gb|EFM93295.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865741|gb|EFM97620.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 571 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 132/276 (47%), Positives = 174/276 (63%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + ++ V + AP A D N K + L E Sbjct: 237 EAVA----VGERQAPTAEMQLVDTPNAKTINELVEQ 268 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 113/188 (60%), Gaps = 4/188 (2%) Query: 254 APYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A +D+ N D P+ K V RGIEVGHIF GTKYS M AT +G DGK Sbjct: 377 AAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGKPLV 436 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIY 369 + MG YGIG RVVAA IE HD +GIIWP D +APF ++++ + H + + E++Y Sbjct: 437 MTMGCYGIGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELY 496 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L G DV +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ + Sbjct: 497 RTLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMI 556 Query: 430 SLEEVINY 437 + ++++ + Sbjct: 557 AKDQLLAF 564 >gi|322515550|ref|ZP_08068532.1| proline--tRNA ligase [Actinobacillus ureae ATCC 25976] gi|322118393|gb|EFX90656.1| proline--tRNA ligase [Actinobacillus ureae ATCC 25976] Length = 571 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 132/276 (47%), Positives = 174/276 (63%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVEKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + ++ V + AP A D N K + L E Sbjct: 237 EAVA----VGERQAPTAEMQLVDTPNAKTINELVEQ 268 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 111/188 (59%), Gaps = 4/188 (2%) Query: 254 APYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A +D+ N D P+ K V RGIEVGHIF GTKYS M AT +G DGK Sbjct: 377 AAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGKPLV 436 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIY 369 + MG YGIG RVVAA IE HD +GIIWP D +APF ++++ + H + + E++Y Sbjct: 437 MTMGCYGIGVTRVVAAAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELY 496 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L G DV +DD E+ G FA +L+G P V++G K + + ++E K+R TG + + Sbjct: 497 RSLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLVNGEIEYKNRRTGEKSMI 556 Query: 430 SLEEVINY 437 + ++++ + Sbjct: 557 TKDQLLAF 564 >gi|292491210|ref|YP_003526649.1| prolyl-tRNA synthetase [Nitrosococcus halophilus Nc4] gi|291579805|gb|ADE14262.1| prolyl-tRNA synthetase [Nitrosococcus halophilus Nc4] Length = 575 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAEI SH+LMLR G I + + G+Y+WLPLG + L V IIREE Sbjct: 1 MRTSQYLLTTTRETPADAEIISHQLMLRGGFIRRLAAGLYTWLPLGLRVLRKVEGIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ +P +Q A+LW E+GR++ YG E+LR DR+ + +GPTHEEV+TD+ R Sbjct: 61 MDKAGAQEILMPAVQPAELWQETGRWEQYGPELLRFTDRHQRPFCFGPTHEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ+KFRDE+RPRFGVMR+REFLMKDAYSF L + +Y +M+ + Sbjct: 121 EIRSYKQLPANFYQIQVKFRDEIRPRFGVMRAREFLMKDAYSFHLDQTSLEQTYQQMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R+GL ++A++G IGG SHEF VLA +GE + S Sbjct: 181 YSRIFERIGLTFRAVQADTGAIGGQTSHEFHVLAASGEDAIAFS 224 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGHIF G KYS M+ T G+ + MG YGIG RVVAA IE +HD GI Sbjct: 403 ARGIEVGHIFQLGEKYSQAMNTTVLDETGQAIILTMGCYGIGVSRVVAAAIEQNHDEHGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWPD +APF+++L+ I AH V R+ +++Y++L G +V DD + G F DL Sbjct: 463 IWPDPIAPFQLALVPINAHKSVRVRETADQLYSQLQAAGFEVLLDDRQLRPGVIFTDMDL 522 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G P ++++ + + VE K R G + L+ +I Sbjct: 523 IGIPHRLVISDRGLDAGTVEYKRRRDGKTSTIQLDNLI 560 >gi|307262323|ref|ZP_07543971.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306867986|gb|EFM99814.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 571 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 132/276 (47%), Positives = 174/276 (63%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + ++ V + AP A D N K + L E Sbjct: 237 EAVA----VGERQAPTAEMQLVDTPNAKTINELVEQ 268 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 75/183 (40%), Positives = 112/183 (61%), Gaps = 4/183 (2%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K V RGIEVGHIF GTKYS M AT +G DGK + MG Sbjct: 382 VADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGKPLVMTMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG RVVAA IE HD +GIIWP D +APF ++++ + H + + E++Y L Sbjct: 442 YGIGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRTLKA 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ ++ +++ Sbjct: 502 QGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQL 561 Query: 435 INY 437 + + Sbjct: 562 LAF 564 >gi|307257929|ref|ZP_07539683.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863576|gb|EFM95505.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 571 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 132/276 (47%), Positives = 174/276 (63%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + ++ V + AP A D N K + L E Sbjct: 237 EAVA----VGERQAPTAEMQLVDTPNAKTINELVEQ 268 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 113/188 (60%), Gaps = 4/188 (2%) Query: 254 APYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A +D+ N D P+ K V RGIEVGHIF GTKYS M AT +G DGK Sbjct: 377 AAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGKPLV 436 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIY 369 + MG YGIG RVVAA IE HD +GIIWP D +APF ++++ + H + + E++Y Sbjct: 437 MTMGCYGIGVTRVVAAAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELY 496 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L G DV +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ + Sbjct: 497 RTLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMI 556 Query: 430 SLEEVINY 437 + ++++ + Sbjct: 557 AKDQLLAF 564 >gi|17547535|ref|NP_520937.1| prolyl-tRNA synthetase [Ralstonia solanacearum GMI1000] gi|81849506|sp|Q8XVL4|SYP_RALSO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|17429839|emb|CAD16523.1| probable prolyl-trna synthetase protein [Ralstonia solanacearum GMI1000] Length = 574 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 163/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + G+Y+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGLYTYMPVGLRVIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GA+E+ +P +Q A+LW E+GR+D G EM+R+ DR+++ ++ PT EEV+TDI R+ Sbjct: 61 MNASGAVEVLMPVVQPAELWQETGRWDKMGDEMMRVKDRHERDLVIQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KM+ + Sbjct: 121 EIRSYKQMPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAEGLKVSYEKMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + A++G IGG SHEF V+ADTGE + S D Sbjct: 181 YTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYSPD 226 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 103/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A D+ N D P+ K A RGIEVGH+F GT+YS MSATF +GK + Sbjct: 382 PEAEVYDLRNVVEGDPSPDGKGTLAICRGIEVGHVFMLGTRYSESMSATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + + R ++++A Sbjct: 442 MMGCYGIGITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G+ FA +L+G P +V+VG + + D K+E++ R Sbjct: 502 LAAAGIDVILDDRGERPGAMFADWELIGVPFRVVVGERGLKDGKLELQGR 551 >gi|190151185|ref|YP_001969710.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264534|ref|ZP_07546118.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|226731421|sp|B3GZ82|SYP_ACTP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189916316|gb|ACE62568.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870133|gb|EFN01893.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 571 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 132/276 (47%), Positives = 174/276 (63%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + ++ V + AP A D N K + L E Sbjct: 237 EAVA----VGERQAPTAEMQLVDTPNAKTINELVEQ 268 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 75/183 (40%), Positives = 112/183 (61%), Gaps = 4/183 (2%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K V RGIEVGHIF GTKYS M AT +G DGK + MG Sbjct: 382 VADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKATVQGDDGKPLVMTMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG RVVAA IE HD +GIIWP D +APF ++++ + H + + E++Y L Sbjct: 442 YGIGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRTLKA 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ ++ +++ Sbjct: 502 QGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQL 561 Query: 435 INY 437 + + Sbjct: 562 LAF 564 >gi|32035109|ref|ZP_00135161.1| COG0442: Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209292|ref|YP_001054517.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20] gi|166980093|sp|A3N3C6|SYP_ACTP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|126098084|gb|ABN74912.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 571 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 132/276 (47%), Positives = 174/276 (63%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + ++ V + AP A D N K + L E Sbjct: 237 EAVA----VGERQAPTAEMQLVDTPNAKTINELVEQ 268 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 113/188 (60%), Gaps = 4/188 (2%) Query: 254 APYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A +D+ N D P+ K V RGIEVGHIF GTKYS M AT +G DGK Sbjct: 377 AAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGKPLV 436 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIY 369 + MG YGIG RVVAA IE HD +GIIWP D +APF ++++ + H + + E++Y Sbjct: 437 MTMGCYGIGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELY 496 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L G DV +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ + Sbjct: 497 RTLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMI 556 Query: 430 SLEEVINY 437 + ++++ + Sbjct: 557 AKDQLLAF 564 >gi|302879510|ref|YP_003848074.1| prolyl-tRNA synthetase [Gallionella capsiferriformans ES-2] gi|302582299|gb|ADL56310.1| prolyl-tRNA synthetase [Gallionella capsiferriformans ES-2] Length = 569 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 165/224 (73%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P +AE+ SH LM+R G I + + G+Y+W+PLG +AL V AI+REE Sbjct: 1 MRVSQFFISTLKEAPSEAELPSHILMMRAGYIRKLASGLYTWMPLGLRALRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GAIE+ +P +Q A+LW E+GR++ +G +ML++ DR++ +GPTHEEV+TDI R Sbjct: 61 MNNSGAIELLMPAVQPAELWDETGRWEVFGPQMLKIKDRHNNQFCFGPTHEEVITDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + + +Y M+ + Sbjct: 121 EIRSYRQLPVNFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHADFDSLEQTYAVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF RLGLK + A++G IGG SHEF VLAD+GE + +C Sbjct: 181 YSRIFTRLGLKFRAVAADTGAIGGSGSHEFHVLADSGEDALAYC 224 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 7/176 (3%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF TKY+ M ATF A GK ++MG Sbjct: 383 VADIRNVVTGDISPDGKGTLEICRGIEVGHIFQLRTKYAADMKATFLDAQGKAQTLEMGC 442 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD +GI P ++APF+++L+ I + + R A E++YA L Sbjct: 443 YGIGVSRIVAAAIEQNHDPRGITLPAAIAPFQVALVPIGMNKSEAVRAAAEQLYAELKAS 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 +V +DD E+ G FA +L+G P +++VG + + + +E + R R+D +L Sbjct: 503 DIEVLFDDRDERPGVMFADMELIGIPHRIVVGDRGLKEGLIEYQGR----RDDAAL 554 >gi|307251435|ref|ZP_07533349.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306856519|gb|EFM88661.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 571 Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 132/276 (47%), Positives = 174/276 (63%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + ++ V + AP A D N K + L E Sbjct: 237 EAVA----VGERQAPTAEMQLVDTPNAKTINELVEQ 268 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 4/188 (2%) Query: 254 APYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A +D+ N D P+ K V RGIEVGHIF GTKYS M AT +G DGK Sbjct: 377 AAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGKPLV 436 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIY 369 + MG YGIG RVVAA IE HD +GIIWP D +APF ++++ + H + + E++Y Sbjct: 437 MTMGCYGIGVTRVVAAAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELY 496 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L DV +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ + Sbjct: 497 RTLKAQDVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMI 556 Query: 430 SLEEVINY 437 + ++++ + Sbjct: 557 AKDQLLAF 564 >gi|303251144|ref|ZP_07337328.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253514|ref|ZP_07535384.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302649995|gb|EFL80167.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859015|gb|EFM91058.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 571 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 132/276 (47%), Positives = 174/276 (63%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + ++ V + AP A D N K + L E Sbjct: 237 EAVA----VGERQAPTAEMQLVDTPNAKTINELVEQ 268 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/183 (40%), Positives = 112/183 (61%), Gaps = 4/183 (2%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K V RGIEVGHIF GTKYS M AT +G DGK + MG Sbjct: 382 VADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGKPLVMTMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG RVVAA IE HD +GIIWP D +APF ++++ + H + + E++Y L Sbjct: 442 YGIGVTRVVAAAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRTLKA 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ ++ +++ Sbjct: 502 QGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQL 561 Query: 435 INY 437 + + Sbjct: 562 LAF 564 >gi|303252707|ref|ZP_07338869.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248901|ref|ZP_07530912.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648446|gb|EFL78640.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854596|gb|EFM86788.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 571 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 132/276 (47%), Positives = 174/276 (63%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + ++ V + AP A D N K + L E Sbjct: 237 EAVA----VGERQAPTAEMQLVDTPNAKTINELVEQ 268 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 4/188 (2%) Query: 254 APYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A +D+ N D P+ K V RGIEVGHIF GTKYS M AT +G DGK Sbjct: 377 AAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGKPLV 436 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIY 369 + MG YGIG RVVAA IE HD +GIIWP D +APF ++++ + H + + E++Y Sbjct: 437 MTMGCYGIGVTRVVAAAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELY 496 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L DV +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ + Sbjct: 497 RTLKAQDVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMI 556 Query: 430 SLEEVINY 437 + ++++ + Sbjct: 557 AKDQLLAF 564 >gi|119470323|ref|ZP_01613082.1| prolyl-tRNA synthetase [Alteromonadales bacterium TW-7] gi|119446495|gb|EAW27770.1| prolyl-tRNA synthetase [Alteromonadales bacterium TW-7] Length = 574 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYILATLKETPSDAEIVSHQLMLRAGMIRRVASGLYTWLPSGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GAIEM +P +Q ADLW ESGR+ +G E++R DR+++ GPTHEEV+TD R Sbjct: 61 MDKAGAIEMLMPVIQPADLWEESGRWSEFGPELMRFTDRHNREFALGPTHEEVITDFVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T YQ+Q K RDE RPRFGVMR+REF MKDAYSF L+ E ++Y M + Sbjct: 121 EVNSYKQLPLTLYQVQTKVRDERRPRFGVMRAREFTMKDAYSFHLSEECLNNTYQAMHKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL P+ A++G IGG +SHEF VLA++GE + S Sbjct: 181 YCNIFERLGLDYRPVIADTGSIGGSVSHEFHVLAESGEDAIAFS 224 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/146 (42%), Positives = 89/146 (60%), Gaps = 1/146 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+EVGHIF GTKYS M A DGK+ + MG YG+G R+VAA IE ++D GII Sbjct: 409 RGVEVGHIFQLGTKYSEAMKAGVLNEDGKNQVMTMGCYGVGVSRIVAAAIEQNNDKYGII 468 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP S+APF ++++ + H D +Y L G DV +DD E+ G F +L+ Sbjct: 469 WPQSIAPFDLAIVPMNMHKSHRIPDIANSLYQGLKDAGVDVLFDDRKERPGVMFNDMELV 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G P +++G + + ++KVE+K+R TG Sbjct: 529 GVPFTLVIGERNLDENKVELKNRRTG 554 >gi|293603409|ref|ZP_06685836.1| proline--tRNA ligase [Achromobacter piechaudii ATCC 43553] gi|292818182|gb|EFF77236.1| proline--tRNA ligase [Achromobacter piechaudii ATCC 43553] Length = 576 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 129/259 (49%), Positives = 172/259 (66%), Gaps = 10/259 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y + L+E P +AE+ASH+LM R GMI + + GIY+++PLG K + V AI+REE Sbjct: 1 MRASNYHINTLKEAPSEAEVASHQLMTRAGMIRKLAGGIYTYMPLGLKIIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GAIE+ +P +Q A+LW ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNASGAIELLMPVVQPAELWQESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G+ SY+ M+ + Sbjct: 121 EIHSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGALKSYDTMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF+RLGL+ + A++G IGG SHEF V+A+TGE D + + TD+ Sbjct: 181 YMRIFNRLGLQFRAVAADTGSIGGTRSHEFQVIAETGE----------DLLVYNAETDYA 230 Query: 241 DIISLNSIVEQWTAPYAAT 259 I L V + AAT Sbjct: 231 ANIELAEAVALYPTRGAAT 249 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 68/166 (40%), Positives = 97/166 (58%), Gaps = 3/166 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGH+FY G KYS + ATF GK ++MG Sbjct: 387 VADLRNVVAGDPSPDGKGTLSIQRGIEVGHVFYLGKKYSEALKATFLDETGKPAVLEMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +HD +GIIWP ++APF++ + + + RD +K+Y L Sbjct: 447 YGIGVTRIVGAAIEQNHDARGIIWPRAIAPFEVVICPVGWGKSETVRDTAQKLYESLLAR 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD + G FA +L+G PL+V VG + ++D VE++ R Sbjct: 507 GVDVILDDRDARPGVMFAEWELIGAPLRVTVGERGLNDGVVELQAR 552 >gi|109897601|ref|YP_660856.1| prolyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] gi|123171506|sp|Q15WD6|SYP_PSEA6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|109699882|gb|ABG39802.1| prolyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] Length = 571 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 161/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR G++ + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGLVRKLASGLYTWLPTGLRVLNKVAQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G++E+ +P +Q ADLW ESGR+D YG E+LR+ DR+ + + GPTHEEV+T + ++ Sbjct: 61 MDRAGSLEILMPVVQPADLWQESGRWDEYGPELLRIKDRHYRDFVLGPTHEEVVTALVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQ+Q KFRDE+RPRFGVMR REF MKDAYSF L+ E +Y+ MF + Sbjct: 121 EVSSYKQLPLNVYQVQTKFRDEVRPRFGVMRGREFTMKDAYSFHLSDECLNKTYDDMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y R+F R+ L+ P+ A++G IGG+ SHEF VLAD+GE + S Sbjct: 181 YCRVFERINLEFRPVIADNGSIGGNASHEFHVLADSGEDDIAFS 224 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 108/183 (59%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N + D P+ + RGIEVGHIF G+KYS ++ +GK + MG Y Sbjct: 387 ADIRNVQAGDPSPDGQGTLEIKRGIEVGHIFQLGSKYSEALNCGVLDENGKHQVLNMGCY 446 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVG 376 GIG R+VAA IE +HD GIIWPD++APFK++++ + H + E +YA+L G Sbjct: 447 GIGVSRIVAAAIEQNHDKYGIIWPDAIAPFKVAIVPMNMHKSHRIQQVAEDLYAQLKAAG 506 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD E+ G F +L+G P +++G + + + KVE K+R +G ++ + + ++ Sbjct: 507 VEVLFDDRKERPGVMFNDMELVGVPHTIVIGERNLDEQKVEYKNRRSGEKQLIDIPQLAE 566 Query: 437 YAS 439 + S Sbjct: 567 FVS 569 >gi|261419457|ref|YP_003253139.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|319766272|ref|YP_004131773.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC52] gi|261375914|gb|ACX78657.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|317111138|gb|ADU93630.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC52] Length = 567 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G I Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQAFIPTLREVPADAEVKSHQLLLRAGFIRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ GPTHEE++T I R Sbjct: 61 MNRIGAMELFMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFALGPTHEEMITAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +YN M+ + Sbjct: 121 EVKTYKRLPLVLYQIQTKFRDEKRPRFGLLRGREFMMKDAYSFHTSKESLDETYNNMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG IGG +HEF+VL+D GE + S Sbjct: 181 YANIFRRCGLNFRAVIADSGAIGGKDTHEFMVLSDIGEDTIAYS 224 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 88/241 (36%), Positives = 127/241 (52%), Gaps = 15/241 (6%) Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 GPIG +S + V+AD + + N + I +N + + YA Sbjct: 334 GPIG--VSEDVTVIADHAVAAIVNG-------VCGANEEGYHYIGVNPGRDFAVSQYA-- 382 Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ K D P+ K ARGIEVGH+F GTKYS M+A + +G+ + MG Y Sbjct: 383 -DLRFVKEGDPSPDGKGTIRFARGIEVGHVFKLGTKYSEAMNAVYLDENGQTQTMIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+VAA+ E D G++WP SVAPF I L+ A R E+ Y +L + G Sbjct: 442 GIGVSRLVAAIAEQFADEHGLVWPASVAPFHIHLLTANAKSDEQRALAEEWYEKLGQAGF 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V +DD E+ G +FA +DL+G PL+V VG K + VE+K R TG D+ + E+++ Sbjct: 502 EVLYDDRPERAGVKFADSDLIGIPLRVTVG-KRAGEGVVEVKVRKTGETFDVPVSELVDT 560 Query: 438 A 438 A Sbjct: 561 A 561 >gi|239817181|ref|YP_002946091.1| prolyl-tRNA synthetase [Variovorax paradoxus S110] gi|259511631|sp|C5CXW9|SYP_VARPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|239803758|gb|ACS20825.1| prolyl-tRNA synthetase [Variovorax paradoxus S110] Length = 581 Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 162/224 (72%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ASH+LM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MKASRFFVSTLKEAPADAEVASHRLMMRAGMIKKLGTGIYTYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+ W E+GR+D G E+LR+ DR+D+ + PT EEV+TDI R Sbjct: 61 MNRAGAVELTMPVVQPAEFWQETGRFDKMGPELLRIKDRHDRDFVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD + +K SY M + Sbjct: 121 EIRSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDLDAAKASYQAMADA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL+ + A+SG IGGDLS EF V+A TGE V+C Sbjct: 181 YRRIFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC 224 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 3/166 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D+ P+ K V A RGIEVGH+F GTKYS M+AT+ GK +++MG Sbjct: 393 VADLRNVVAGDASPDGKGVLAIERGIEVGHVFVLGTKYSKDMNATYLDEAGKPQFLEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + + I + A E +Y +L Sbjct: 453 YGIGITRLPAAAIEQNHDERGIIWPDALAPFTVVVCPIGMDRSPEVKVAAEALYEQLLAA 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD GE+ G+ FA +L+G P +V++ + + + ++E +HR Sbjct: 513 GVDVLLDDRGERPGAMFADWELIGVPHRVVISDRGLKEGQLEYQHR 558 >gi|56419792|ref|YP_147110.1| prolyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|81819753|sp|Q5L0J4|SYP_GEOKA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56379634|dbj|BAD75542.1| proline-tRNA synthetase [Geobacillus kaustophilus HTA426] Length = 567 Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G I Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQAFIPTLREVPADAEVKSHQLLLRAGFIRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ GPTHEE++T I R Sbjct: 61 MNRIGAMELFMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFALGPTHEEMITAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +YN M+ + Sbjct: 121 EVKTYKRLPLVLYQIQTKFRDEKRPRFGLLRGREFMMKDAYSFHTSKESLDETYNNMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG IGG +HEF+VL+D GE + S Sbjct: 181 YANIFRRCGLNFRAVIADSGAIGGKDTHEFMVLSDIGEDTIAYS 224 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 70/160 (43%), Positives = 98/160 (61%), Gaps = 1/160 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GTKYS M+A + +G+ + MG YGIG R+VAA+ E D G+ Sbjct: 403 ARGIEVGHVFKLGTKYSEAMNAVYLDENGQTQTMIMGCYGIGVSRLVAAIAEQFADEHGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SVAPF I L+ A R E+ Y +L + G +V +DD E+ G +FA +DL+ Sbjct: 463 VWPASVAPFHIHLLTANAKSDEQRALAEEWYEKLGQAGFEVLYDDRPERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 G PL+V VG K + VE+K R TG D+ + E+++ A Sbjct: 523 GIPLRVTVG-KRAGEGVVEVKVRKTGETFDVPVSELVDTA 561 >gi|332140465|ref|YP_004426203.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|226731424|sp|B4RV73|SYP_ALTMD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|327550487|gb|AEA97205.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] Length = 572 Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 159/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLATQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPSGLRVLNKVANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW ESGR++ YG E+LR+ DR+ + + GPTHEEV+T + R+ Sbjct: 61 MNKAGAIEVLMPVVQPADLWEESGRWEEYGPELLRVKDRHQRDFVLGPTHEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q KFRDE+RPRFG+MR REF MKDAYSF L + +Y KM+ + Sbjct: 121 EISSYKQLPLNLYQVQTKFRDEVRPRFGIMRGREFTMKDAYSFHLEDSCLEETYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R+GL + A+SG IGG+ SHEF VLA++GE + S D Sbjct: 181 YCAIFSRMGLDFRAVIADSGSIGGNHSHEFHVLAESGEDAIAFSSD 226 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 101/176 (57%), Gaps = 3/176 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T D+ N D+ P+ + RGIEVGHIF G KYS M+ GK + MG Sbjct: 387 TVDIRNVVAGDASPDGQGTLDIKRGIEVGHIFQLGRKYSEAMNCGVLSETGKHQTLTMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD GI WPD +APFKI+LI + H ++A E +Y L + Sbjct: 447 YGIGVSRIVAAAIEQNHDKFGIKWPDPIAPFKIALIPMNMHKSHRIKEAAEALYEELVAL 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 G +V +DD E+ G F +L+G P +++G + + + +VE K+R TG ++ + L Sbjct: 507 GIEVLFDDRKERPGVMFNDMELIGIPHSIVIGERNLDNQQVEYKNRRTGEKQLLDL 562 >gi|300702990|ref|YP_003744592.1| proline--tRNA ligase [Ralstonia solanacearum CFBP2957] gi|299070653|emb|CBJ41948.1| Proline--tRNA ligase [Ralstonia solanacearum CFBP2957] Length = 574 Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 162/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G +A+ V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYTYMPVGLRAIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+EM +P +Q +LW E+GR+D G+E++R+ DR+++ ++ PT EEV+TDI R+ Sbjct: 61 MNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMRVKDRHERDLVIQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KMF + Sbjct: 121 EIRSYKQMPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDVEGMKVSYQKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL + A++G IGG SHEF V+A+TGE + S + Sbjct: 181 YTRIFQRFGLAFRAVAADNGAIGGSGSHEFHVIAETGEDAIVYSPE 226 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 103/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K A RGIEVGH+F GT+YS MSATF +GK + Sbjct: 382 PEAEVADLRNVVEGDPSPDGKGTLAICRGIEVGHVFMLGTRYSESMSATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + + R ++++A Sbjct: 442 VMGCYGIGITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P +V+VG + + + K+E++ R Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPFRVVVGERGLKEGKLELQGR 551 >gi|332141950|ref|YP_004427688.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551972|gb|AEA98690.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] Length = 572 Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 159/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLATQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPSGLRVLNKVANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW ESGR++ YG E+LR+ DR+ + + GPTHEEV+T + R+ Sbjct: 61 MNKAGAIEVLMPVVQPADLWEESGRWEEYGPELLRVKDRHQRDFVLGPTHEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q KFRDE+RPRFG+MR REF MKDAYSF L + +Y KM+ + Sbjct: 121 EISSYKQLPLNLYQVQTKFRDEVRPRFGIMRGREFTMKDAYSFHLEDSCLEETYQKMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R+GL + A+SG IGG+ SHEF VLA++GE + S D Sbjct: 181 YCAIFSRMGLDFRAVIADSGSIGGNHSHEFHVLAESGEDAIAFSSD 226 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 101/176 (57%), Gaps = 3/176 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T D+ N D+ P+ + RGIEVGHIF G KYS M+ GK + MG Sbjct: 387 TVDIRNVVAGDASPDGQGTLDIKRGIEVGHIFQLGRKYSEAMNCGVLSETGKHQTLTMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD GI WPD +APFKI+LI + H ++A E +Y L + Sbjct: 447 YGIGVSRIVAAAIEQNHDKFGIKWPDPIAPFKIALIPMNMHKSHRIKEAVEALYEELVAL 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 G +V +DD E+ G F +L+G P +++G + + + +VE K+R TG ++ + L Sbjct: 507 GIEVLFDDRKERPGVMFNDMELIGIPHSIVIGERNLDNQQVEYKNRRTGEKQLLDL 562 >gi|134095943|ref|YP_001101018.1| prolyl-tRNA synthetase [Herminiimonas arsenicoxydans] gi|166980129|sp|A4G8R0|SYP_HERAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|133739846|emb|CAL62897.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) (Global RNA synthesis factor) [Herminiimonas arsenicoxydans] Length = 577 Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 160/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MRASRFFISTLKEAPSDAEIVSHKLMMRAGMIKRLGSGIYTYMPIGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR AIE+ +P +Q A+LW E+GR+D G E++R+ DR+ + PT EEV+TD+ RS Sbjct: 61 MNRAHAIELLMPLVQPAELWQETGRWDKMGPELMRVKDRHGREYAIQPTSEEVVTDVVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY MF + Sbjct: 121 EIKSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDAEGLKRSYQIMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y++IF+R GL+ + A++G IGG SHEF V+ADTGE V+C Sbjct: 181 YVKIFNRFGLQFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYC 224 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A D+ N D P+ K V A RGIEVGH+F GT YS M AT+ +GK + Sbjct: 385 PEAMVLDLRNVVEGDPSPDGKGVLAIQRGIEVGHVFQLGTAYSEKMKATYLDENGKPQLI 444 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R+V A IE + D +GIIWP ++APF++ L + + + +K+Y Sbjct: 445 QMGCYGIGVTRIVGAAIEQNFDDRGIIWPAALAPFEVVLCPMGYDRSESVKTETDKLYEA 504 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G+ FA +L+G P ++++G + + + +E K R ++L Sbjct: 505 LLAAGVDVILDDRGERPGAMFADWELIGAPHRIVIGERGLKEGALEYKGRRDADATAVAL 564 Query: 432 EEVINYASHRFS 443 ++++ + R + Sbjct: 565 DDMLAFVQARLA 576 >gi|223041831|ref|ZP_03612021.1| prolyl-tRNA synthetase [Actinobacillus minor 202] gi|223017400|gb|EEF15821.1| prolyl-tRNA synthetase [Actinobacillus minor 202] Length = 317 Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 132/276 (47%), Positives = 175/276 (63%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFNDRGNRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + ++ V + AP A D N K + L E Sbjct: 237 EAVA----VGERQAPTAEMQLVDTPNAKTINELVEQ 268 >gi|311259273|ref|XP_003128020.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Sus scrofa] Length = 472 Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 152/440 (34%), Positives = 234/440 (53%), Gaps = 37/440 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L+ P D S +LML+ G+IH S G Y LP +A++ + ++ +E G +++ Sbjct: 56 LEGRPGDLTCKSQRLMLQVGLIHPASPGCYHLLPYTVRAMEKLVRVVDQEMQAIGGQKVN 115 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH-IKSYRNLP 129 +P+L A+LW + R+DS GKE+LRL DR+ K GPTHEE +T + S SY+ LP Sbjct: 116 MPSLSPAELWRATSRWDSMGKELLRLRDRHGKEYCLGPTHEEAITALVASQKTLSYKQLP 175 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F RLG Sbjct: 176 VLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAARRTYSLVCDAYGSLFDRLG 235 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDFDDIISLNSI 248 L+ + ++A+ G IGG +SHEF + D GE ++ C + S N + D+ N Sbjct: 236 LQCLQVQADVGSIGGTMSHEFQLPVDVGEDRLALCPRCSF-----SANVETLDLAQTNCP 290 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 Q P T +GIEVGH FY GTKYS +A F GK Sbjct: 291 ACQ--GPLTET--------------------KGIEVGHTFYLGTKYSSIFNAQFTNVHGK 328 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACE 366 +MG YG+G R++AA IE I WP +AP+++ LI K + ++ + Sbjct: 329 ASLAEMGCYGLGVTRILAAAIEVLSAEDCIRWPGLLAPYQVCLIPPKKGSKEEAAAELTG 388 Query: 367 KIYARLS----KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD-SKVEIKH 420 +Y ++ ++ +V DD IG++ AD LG+P +I G + + + + E++ Sbjct: 389 HLYDHITEAVPQLRGEVLLDDRTHLTIGNRLKDADKLGYPFVIIAGKRALDEPAHFEVRC 448 Query: 421 RLTGIREDMSLEEVINYASH 440 + TG ++ E V+ S Sbjct: 449 QNTGEVVFLTREGVLELLSQ 468 >gi|119946895|ref|YP_944575.1| prolyl-tRNA synthetase [Psychromonas ingrahamii 37] gi|152112944|sp|A1SZR1|SYP_PSYIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119865499|gb|ABM04976.1| prolyl-tRNA synthetase [Psychromonas ingrahamii 37] Length = 571 Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 117/226 (51%), Positives = 156/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + Y L +E P DA I SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTNYLLSTQKEAPSDAVIVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G +E+ +P +Q ADLW+E+GR+D YG E+LR+ DR+ + + GPTHEEV+T++ R Sbjct: 61 MERAGGVEVLMPIVQPADLWLETGRWDQYGGELLRIKDRHTRDFVLGPTHEEVITELVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE RPRFGVMR+REF MKDAYSF + + +Y KMF + Sbjct: 121 EVNSYKQLPLNLFQIQTKFRDETRPRFGVMRAREFTMKDAYSFHMDQACLEKTYQKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL+ P+ A++G IGG SHEF VLA +GE + S + Sbjct: 181 YCRIFDRLGLEYRPVIADTGSIGGSASHEFHVLAQSGEDAIVFSTE 226 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 103/166 (62%), Gaps = 1/166 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGHIF G Y+ M+A GK+ + MG YGIG R+VAA IE ++D GI Sbjct: 406 ARGIEVGHIFQLGDTYTKAMNAGVLNQQGKNQILTMGCYGIGISRIVAAAIEQNNDKNGI 465 Query: 339 IWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IW +++APF + ++ + H + EK YA L G +V +DD E+ G FA A+L Sbjct: 466 IWNNTLAPFSVVIVPMNMHKSHRVAELAEKYYAELQAAGIEVLFDDRKERPGIMFADAEL 525 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +G P +++G + + + +E K RL+G++++++++EVIN+ + + Sbjct: 526 MGIPHTLVIGDRSLDNGVIEYKDRLSGVKQEVAIDEVINFIKAQLA 571 >gi|260889054|ref|ZP_05900317.1| proline--tRNA ligase [Leptotrichia hofstadii F0254] gi|260861114|gb|EEX75614.1| proline--tRNA ligase [Leptotrichia hofstadii F0254] Length = 570 Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 157/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK FL +E P++A+I SH+LMLR MI Q ++G+Y++LP G + L + I REE Sbjct: 1 MRLSKAFLKTYKEAPKEAQIVSHQLMLRAFMIKQLTRGVYTYLPFGYRVLKKIENITREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ A LW ESGR+ +YG E++RL DRN++ GPTHEEV+TDI R Sbjct: 61 MDRAGAQELLMPVLQPASLWEESGRWFAYGPELMRLKDRNEREFSLGPTHEEVITDIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LPF YQIQ KFRDE+RPRFG+MR REF+MKD YSF LT E Y M + Sbjct: 121 SISSYKELPFNVYQIQTKFRDEMRPRFGLMRGREFVMKDGYSFHLTQESLDEEYLNMKDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R+GL + A++G IGGD+SHEF+VLA++GE + S Sbjct: 181 YSRIFERMGLNYRAVEADTGSIGGDVSHEFMVLAESGEDDILYS 224 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 Y +D+ + D P+ K + ARGIEVGHIF G KYS ++AT +GK ++ Sbjct: 381 YDLAADIRTARAGDLSPDGKGILKIARGIEVGHIFKLGEKYSKALNATVLDENGKQAIMK 440 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YG+G R+++A IE +HD GIIWP ++AP+ +I D+ + EK+Y L+ Sbjct: 441 MGCYGMGMSRIISAAIEQNHDEYGIIWPKAIAPYHADIIIANMKDETQVNIGEKLYNELN 500 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + + DD E+ G +F ADL+GFPL+++VG K +D VEIK R TG D+ +E+ Sbjct: 501 QNKIEAVLDDRNERAGFKFKDADLIGFPLKIVVG-KGAADGIVEIKDRKTGESTDVKVED 559 Query: 434 VINYASH 440 V+ + ++ Sbjct: 560 VLKFVNN 566 >gi|297530568|ref|YP_003671843.1| prolyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|297253820|gb|ADI27266.1| prolyl-tRNA synthetase [Geobacillus sp. C56-T3] Length = 567 Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G I Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQAFIPTLREVPADAEVKSHQLLLRAGFIRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ GPTHEE++T I R Sbjct: 61 MNRIGAMELFMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFALGPTHEEMITAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +YN M+ + Sbjct: 121 EVKTYKRLPLVLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHTSKESLDETYNNMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG IGG +HEF+VL+D GE + S Sbjct: 181 YANIFRRCGLNFRAVIADSGAIGGKDTHEFMVLSDIGEDTIAYS 224 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 69/160 (43%), Positives = 97/160 (60%), Gaps = 1/160 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GTKYS M+A + +G+ + MG YGIG R+VAA+ E D G+ Sbjct: 403 ARGIEVGHVFKLGTKYSEAMNAVYLDENGQTQTMIMGCYGIGVSRLVAAIAEQFADEHGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SVAPF I L+ A E+ Y +L + G +V +DD E+ G +FA +DL+ Sbjct: 463 VWPASVAPFHIHLLTANAKSDEQHALAEEWYEKLGQAGFEVLYDDRPERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 G PL+V VG K + VE+K R TG D+ + E+++ A Sbjct: 523 GIPLRVTVG-KRAGEGVVEVKVRKTGETFDVPVSELVDTA 561 >gi|332307477|ref|YP_004435328.1| prolyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174806|gb|AEE24060.1| prolyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 571 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 162/224 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR G++ + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGLVRKLASGLYTWLPTGLRVLNKVAQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G++E+ +P +Q ADLW ESGR+D YG E+LR+ DR+ + + GPTHEEV+T + ++ Sbjct: 61 MDRAGSLEILMPVVQPADLWQESGRWDEYGPELLRVKDRHFRDFVLGPTHEEVVTALVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REF MKDAYSF L+ E +Y++MF + Sbjct: 121 EVSSYKQLPLNVYQIQTKFRDEVRPRFGVMRGREFTMKDAYSFHLSDECLNKTYDEMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y R+F R+ L+ P+ A++G IGG+ SHEF VLA++GE + S Sbjct: 181 YCRVFERINLEFRPVIADNGSIGGNASHEFHVLAESGEDDIAFS 224 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 109/181 (60%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N + D P+ K RGIEVGHIF G+KYS ++ +GK + MG Y Sbjct: 387 ADIRNVQAGDPSPDGKGTLEIKRGIEVGHIFQLGSKYSEALNCGVLDENGKHQVLNMGCY 446 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVG 376 GIG R+VAA IE +HD GIIWPD++APFK++++ + H + E++YA+L G Sbjct: 447 GIGVSRIVAAAIEQNHDKYGIIWPDAIAPFKVAIVPMNMHKSHRIQQVAEQMYAQLKAAG 506 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD E+ G F +L+G P +++G + + + KVE K+R +G ++ + + ++ + Sbjct: 507 IEVLFDDRKERPGVMFNDMELVGVPHTIVIGERNLDEQKVEYKNRRSGEKQLIDIPQIAD 566 Query: 437 Y 437 + Sbjct: 567 F 567 >gi|262037473|ref|ZP_06010933.1| proline--tRNA ligase [Leptotrichia goodfellowii F0264] gi|261748508|gb|EEY35887.1| proline--tRNA ligase [Leptotrichia goodfellowii F0264] Length = 576 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 158/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R SK FL +E P++AEI SH+LMLR MI Q ++G+YS+LPLG K L + I+REE Sbjct: 7 VRLSKAFLKTYKEAPKEAEIISHQLMLRASMIKQLTRGVYSYLPLGYKVLRKIENIVREE 66 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR A E+ +P LQ A LW ESGR+ +YG E++RL DRN++ GPTHEEV+TDI R+ Sbjct: 67 MNRANAQEIHMPVLQPASLWEESGRWFAYGPELMRLKDRNEREFALGPTHEEVVTDIVRN 126 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LPF YQIQ KFRDE+RPRFG+MR REFLMKDAYSF + + Y M + Sbjct: 127 MVSSYKDLPFNLYQIQTKFRDEMRPRFGLMRGREFLMKDAYSFHIDQKSLDEEYLNMKSA 186 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y R+F R GL + A+SG IGGD SHEF+VLAD+GE + S Sbjct: 187 YERVFIRCGLDFRAVEADSGSIGGDSSHEFMVLADSGEDDILYS 230 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 78/189 (41%), Positives = 108/189 (57%), Gaps = 4/189 (2%) Query: 256 YAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 Y +D+ + D P+ K ARGIEVGHIF G KYS ++AT +GK + Sbjct: 387 YDFVADIREARAGDGSPDGKGTLKVARGIEVGHIFKLGDKYSKALNATVLDENGKQQIIA 446 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG RV+AA IE +HD GIIWP ++AP+ + +I D+ EK+Y L Sbjct: 447 MGCYGIGISRVMAAAIEQNHDEFGIIWPKNIAPYLVDVIIANIKDEAQFSLGEKLYKELC 506 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G + DD E+ G +F ADL+G PL+++VG K ++ KVEIK R TG ++ EE Sbjct: 507 DNGIETVLDDRNERAGFKFKDADLIGIPLKIVVG-KGAAEGKVEIKDRRTGESREVKAEE 565 Query: 434 VINYASHRF 442 V ++ RF Sbjct: 566 VTDFV-RRF 573 >gi|301760003|ref|XP_002915815.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Ailuropoda melanoleuca] gi|281353585|gb|EFB29169.1| hypothetical protein PANDA_003827 [Ailuropoda melanoleuca] Length = 475 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 149/419 (35%), Positives = 220/419 (52%), Gaps = 35/419 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 R LP L++ + S +LML+ G+IH S G Y LP +A++ + +I +E Sbjct: 52 REDQVLP-LEDRSGNLTCKSQRLMLQVGLIHPASPGCYHLLPYTVRAMEKLERVIDQEMQ 110 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH- 121 G ++++P+L A+LW + R+D GKE+LRL DR+ K GPTHEE +T + S Sbjct: 111 AIGGQKVNMPSLSPAELWRATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAVTALVASQK 170 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY+ LPF YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++H+Y + +Y Sbjct: 171 TMSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAARHTYGLVCEAY 230 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F RLGL+ + ++A+ G IGG SHEF + AD GE + F P + + + Sbjct: 231 GSLFRRLGLRCVRVQADVGSIGGTASHEFQLPADIGEDR------FAVCPSCGFSANTET 284 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + S + P ARGIEVGH FY GTKYS +A Sbjct: 285 LRSSQTDCPTCRGPL--------------------TKARGIEVGHTFYLGTKYSSIFNAQ 324 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK------ 355 F A GK +MG YG+G R++AA IE I WP +AP+++ LI K Sbjct: 325 FTDAQGKPCLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPGLLAPYQVCLIPPKKGSKEE 384 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 A ++ + I + ++ +V DD IG++ A+ G+P +I G + + D Sbjct: 385 AAAELMGHLYDLITEAVPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALED 443 >gi|332526531|ref|ZP_08402643.1| prolyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] gi|332110799|gb|EGJ10976.1| prolyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] Length = 582 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 160/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V AIIREE Sbjct: 1 MKASQTFISTLKEAPADAEIVSHKLMMRAGMIKRLGAGIYNYMPMGLRVIRKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW+E+GR+ +YG E+LR+ DR+D+ + PT EEV+TDI R Sbjct: 61 MNRAGAVELLMPVVQPAELWMETGRFQAYGPELLRVKDRHDRDFVIQPTSEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP TFY +Q KFRDE RPRFGVMR REF MKDAYSFD + SY+ M+ + Sbjct: 121 ELRSYKQLPRTFYHVQTKFRDERRPRFGVMRGREFTMKDAYSFDRDKASALKSYDTMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y IF R GL + A++G IGGD SHEF V+ADTGE V+C Sbjct: 181 YCAIFDRFGLTYRAVAADTGAIGGDASHEFQVIADTGEDAIVYC 224 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 6/189 (3%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTK-YSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + V A RGIEVGH+FY GTK YS PM AT+ +GK +MG Sbjct: 393 VADIRNVVAGDPSPDGQGVLAIQRGIEVGHVFYLGTKKYSEPMGATYLDENGKPQPFEMG 452 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC--RDACEKIYARLS 373 YGIG R++ A IE +HD +GIIWPD++APF +++ I +D+ + A ++++ L+ Sbjct: 453 CYGIGVTRILGAAIEQNHDERGIIWPDAIAPFTVAVCPI-GYDRSADVKAAADQLHDELA 511 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G DV DD GE+ G+ FA +L+G P +V+V + + VE++ R + L E Sbjct: 512 ALGIDVVLDDRGERPGAMFADWELIGVPHRVVVSDRGLKAGTVEVQGRRETAAHTVPLAE 571 Query: 434 VINYASHRF 442 + + R Sbjct: 572 AVAFVKGRL 580 >gi|91078076|ref|XP_971952.1| PREDICTED: similar to prolyl-tRNA synthetase [Tribolium castaneum] Length = 448 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 159/458 (34%), Positives = 250/458 (54%), Gaps = 54/458 (11%) Query: 2 RRSKYFLPILQENPRDAEIASH-------KLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 R S+ F P+ P++AE+ H +LML G+I Q S G + +LPLG K+L+ + Sbjct: 8 RLSRLFQPV-SVVPKNAEVKRHDITSKSQRLMLELGIIRQASPGCFHFLPLGVKSLEKLT 66 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 ++ EE + G ++ PTL +A LW ++GR ++ E+ ++ DR+D++ I PTHEE Sbjct: 67 RLVDEEMKKIGGQKIIFPTLTNAKLWEKTGRLETVSSELFQIKDRHDQSYILSPTHEEAA 126 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 +++ S SY++LP YQI K+RDE++PRFG+MR ++FLMKD YSFD E +KH+ Sbjct: 127 SNLLASLAPISYKHLPLKLYQITSKYRDEMKPRFGLMRGKQFLMKDMYSFDTDLETAKHT 186 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y+++ SY RIF R+G+ + + SG +GG+LSHE+ AD GE Sbjct: 187 YDEICKSYDRIFRRIGIDFVKVVGCSGHMGGELSHEYHYKADVGE--------------- 231 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR---GIEVGHIFYF 290 D I++ N Y+A ++V E + P S + GIEVGH F Sbjct: 232 ------DKILTCNK------CNYSANTEVSGE---EKCPNCGNTSVKIHLGIEVGHTFLL 276 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 G KYS P++ATF GK +QMGSYG+G R++AAVIE + I WP ++P+ + Sbjct: 277 GEKYSKPLNATFLNNHGKPDVLQMGSYGLGLSRILAAVIEVMSSEQEIRWPQILSPYSVI 336 Query: 351 LINIKA---HDQVCRDA--CEKIYARLSKVGC----DVFWDDMGE-QIGSQFAVADLLGF 400 ++ K+ + +D+ + +Y ++ + C +V DD IG +F A G+ Sbjct: 337 ILPPKSGSKEETHIKDSGLVDSLYEKI-ETTCNLQDNVLIDDRTNFTIGRRFLEAKKNGY 395 Query: 401 PLQVIVGSKFVSDSKV-EIKHRLTGIREDMSLEEVINY 437 P V +G K V + + EI + T +S +++NY Sbjct: 396 PFIVTLGKKIVENPLLYEITNLKTNETLFLSENDLMNY 433 >gi|90417103|ref|ZP_01225031.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] gi|90331119|gb|EAS46375.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] Length = 574 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + +E+P DAE+ SH+LMLR GMI + + G+YSWLPLG + V AI+R+E Sbjct: 1 MRASQYLISTKKESPADAEVISHQLMLRAGMIRKVASGLYSWLPLGLRVFRKVEAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA+E+ +P +Q ADLW ESGR+ +G E+LR+ DR+ + GPTHEEV+TDI R+ Sbjct: 61 MDRSGALEIMMPVVQPADLWTESGRWGQFGPELLRIKDRHGREFCLGPTHEEVVTDIIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFGVMR+REF MKDAYSF + + +Y+ M+ + Sbjct: 121 EIRSYKQLPANFYQIQTKFRDERRPRFGVMRTREFCMKDAYSFHVDSASLQETYDLMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R GL + A++G IGG +SHEF VLAD+GE + S + Sbjct: 181 YSAIFDRTGLVYRAVLADTGSIGGSVSHEFHVLADSGEDAIVFSSE 226 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 103/166 (62%), Gaps = 4/166 (2%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + V RGIEVGHIF GTKYS M AT +GKD + MG Y Sbjct: 386 ADIRNVVAGDPSPDGRGVLEIKRGIEVGHIFQLGTKYSEAMKATVLDENGKDRAMSMGCY 445 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVG 376 GIG R+VAA IE +HD GIIWP+S+APF+++++ I H + + C+ +Y++L G Sbjct: 446 GIGVSRIVAAAIEQNHDDNGIIWPESIAPFQVAIVPINMHKSERVAETCQTLYSKLVSAG 505 Query: 377 CDV-FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +V F D+ ++G A +L+G P ++++G + ++D VE ++R Sbjct: 506 YEVLFMDEPKARLGGMLADIELIGIPHRIVIGDRGLADGNVEYRNR 551 >gi|170723171|ref|YP_001750859.1| prolyl-tRNA synthetase [Pseudomonas putida W619] gi|226701321|sp|B1JD82|SYP_PSEPW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169761174|gb|ACA74490.1| prolyl-tRNA synthetase [Pseudomonas putida W619] Length = 571 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 134/303 (44%), Positives = 192/303 (63%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHQRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNMYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL P++A++G IGG SHEF VLA++GE V I S+++D+ Sbjct: 181 YSNIFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDV----------IFSDSSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I + + TA A T ++ +L D+ P+ K + A+ +E Y LP+ Sbjct: 231 ANIEKAEAIPRETARLAPTEEL---RLVDT-PDAKTI-AQLVE---------NYGLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 76/191 (39%), Positives = 112/191 (58%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + V RGIEVGHIF GTKYS + G +GK + Sbjct: 378 PVPQVADLRNVVEGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEALKCQVLGENGKPVVL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ V R+A +K+YA L Sbjct: 438 SMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETDVVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + ++D +E KHR + + Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLADGNLEYKHRTEQDAQALP 557 Query: 431 LEEVINYASHR 441 L EV+ + R Sbjct: 558 LNEVLTFLQAR 568 >gi|315126673|ref|YP_004068676.1| prolyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] gi|315015187|gb|ADT68525.1| prolyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] Length = 574 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 122/224 (54%), Positives = 155/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYILATLKETPSDAEIVSHQLMLRAGMIRRVASGLYTWLPSGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GAIEM +P +Q ADLW ESGR+ +G E++R DR+++ GPTHEEV+TD R Sbjct: 61 MDKAGAIEMLMPVIQPADLWEESGRWSEFGPELMRFTDRHNREFAMGPTHEEVITDFVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQ+Q K RDE RPRFGVMR+REF MKDAYSF LT E +Y M + Sbjct: 121 EINSYKQLPITLYQVQTKVRDERRPRFGVMRAREFTMKDAYSFHLTDECLDATYQVMHKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL P+ A++G IGG +SHEF VLA++GE + S Sbjct: 181 YCNIFERLGLDFRPVIADTGSIGGSVSHEFHVLAESGEDAIAFS 224 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 96/165 (58%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M A GK+ + MG YGIG RVVAA IE ++D GI Sbjct: 409 RGIEVGHIFQLGTKYSEAMKAGVLSESGKNQTMTMGCYGIGVSRVVAAAIEQNNDQYGIT 468 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF ++++ + H D +Y L G DV +DD E+ G F +LL Sbjct: 469 WPKAIAPFDLAIVPMNMHKSHRIPDIANNLYQGLKDAGLDVLFDDRKERPGVMFNDMELL 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + ++KVE+K+R TG + + ++ I ++F+ Sbjct: 529 GVPYTLVIGERNLDENKVELKNRRTGEKLMIDIDSAIETIKNQFN 573 >gi|169836558|ref|ZP_02869746.1| prolyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7a] Length = 282 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 158/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK FL +E P++AE+ SHKLMLR MI Q ++G+YS+LPLG K L + I+REE Sbjct: 1 MRLSKAFLKTYKEAPKEAEVISHKLMLRASMIRQLTRGVYSYLPLGYKVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ +P LQ A LW ESGR+ +YG E++R+ DRN++ GPTHEEV+TDI R+ Sbjct: 61 MDRAGSQEILMPVLQPASLWEESGRWFAYGSELMRMKDRNEREFALGPTHEEVVTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LPF YQIQ KFRDE+RPRFG+MR REFLMKDAYSF LT E + M + Sbjct: 121 TITSYKELPFNLYQIQTKFRDEMRPRFGLMRGREFLMKDAYSFHLTKESLDEEFLNMKNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RI R+ LK + A+SG IGGD S+EF+VLA+ GE + S Sbjct: 181 YSRILERMELKFRAVDADSGSIGGDASNEFMVLAENGEDDILYS 224 >gi|196247600|ref|ZP_03146302.1| Proline--tRNA ligase [Geobacillus sp. G11MC16] gi|196212384|gb|EDY07141.1| Proline--tRNA ligase [Geobacillus sp. G11MC16] Length = 271 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 161/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P +E P DAE+ SH+L+LR G + Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQGFIPTFREVPADAEVKSHQLLLRAGFVRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ + GPTHEE++T I R Sbjct: 61 MNRAGALELLMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFVLGPTHEEMITTIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +YNKM+ + Sbjct: 121 EVKTYKRLPLILYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHTSQESLDETYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG +GG +HEF+VL+D GE + S Sbjct: 181 YANIFRRCGLNFRAVIADSGAMGGKDTHEFMVLSDIGEDTIAYS 224 >gi|311103966|ref|YP_003976819.1| prolyl-tRNA synthetase [Achromobacter xylosoxidans A8] gi|310758655|gb|ADP14104.1| prolyl-tRNA synthetase [Achromobacter xylosoxidans A8] Length = 575 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 131/265 (49%), Positives = 173/265 (65%), Gaps = 13/265 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y + L+E P +AE+ASH+LM R GMI + + GIY+++PLG K + V AI+REE Sbjct: 1 MRASNYHINTLKEAPSEAEVASHQLMTRAGMIRKLAGGIYTYMPLGLKVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q A+LW ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNAAGAIELLMPVVQPAELWQESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G++ SY+ M+ + Sbjct: 121 EIHSYRQLPVNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGAQASYDTMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF RLGL + A++G IGG SHEF V+ADTGE D + + +TD+ Sbjct: 181 YMRIFGRLGLGFRAVAADTGSIGGTRSHEFQVIADTGE----------DLLVYNADTDYA 230 Query: 241 DIISLNSIVEQW---TAPYAATSDV 262 I L V + P A +DV Sbjct: 231 ANIELAEAVALYPTRAEPAQAMADV 255 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 68/166 (40%), Positives = 97/166 (58%), Gaps = 3/166 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGH+FY G KYS + ATF GK ++MG Sbjct: 386 VADLRNVVAGDPSPDGKGTLSIQRGIEVGHVFYLGKKYSEALKATFLDETGKPAVLEMGC 445 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +HD +GIIWP ++APF++ + + + RD +K+Y L Sbjct: 446 YGIGVTRIVGAAIEQNHDARGIIWPRAIAPFEVVICPVGWGKSETVRDTAQKLYESLLAR 505 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD + G FA +L+G PL+V VG + ++D VE++ R Sbjct: 506 GVDVILDDRDARPGVMFAEWELIGAPLRVTVGERGLNDGVVELQAR 551 >gi|296132879|ref|YP_003640126.1| prolyl-tRNA synthetase [Thermincola sp. JR] gi|296031457|gb|ADG82225.1| prolyl-tRNA synthetase [Thermincola potens JR] Length = 579 Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 123/262 (46%), Positives = 175/262 (66%), Gaps = 3/262 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ P L+E P +AE+ SH LMLR G I + + GIY++LPL + + V+ I+REE Sbjct: 1 MRASEILAPTLREVPAEAEVISHILMLRAGFIRKSASGIYTYLPLANRVIKKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q A+LW ESGR+D YG E+ RL DR+ ++ GPTHEE++TD+ R+ Sbjct: 61 MDRKGGQELILPIMQPAELWQESGRWDVYGDELFRLKDRHGRSFALGPTHEEIITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P YQIQ K+RDE RPRFG+MR REF+MKD YSFD G SYNKMF + Sbjct: 121 EIRSYKQMPMLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDEAGLDESYNKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK-DFMDFPIPSENTD 238 Y R+F R GLK P+ A+SG IGG +HEF+VLA++GE V+C++ ++ +E Sbjct: 181 YTRVFSRCGLKFRPVEADSGAIGGSSTHEFMVLAESGEAAIVYCTECEYAANVEKAEACS 240 Query: 239 FDDIISLNSI-VEQWTAPYAAT 259 D + ++ + +E+ P A T Sbjct: 241 VDTVTPMDMLPMEEVATPNART 262 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 74/162 (45%), Positives = 106/162 (65%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVG IF GTKYS + A F +GK+ Y+ MG YGIG R VAA IE +HD GI Sbjct: 402 ARGIEVGQIFKLGTKYSKALGAKFLDENGKEQYIVMGCYGIGITRTVAAAIEQNHDQDGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP S+APF++ ++ + A + E+IY++L + G +V DD E+ G +F ADL+ Sbjct: 462 IWPMSIAPFQVIVVPVSAKSSEQVELAERIYSQLLEAGIEVIIDDRNERPGVKFKDADLI 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G+P++V VG+K V + +VE++ R TG D+ +EEV+ Y + Sbjct: 522 GYPIRVTVGNKAVDEGRVEVRLRKTGDTRDLPVEEVVTYVKN 563 >gi|53803705|ref|YP_114445.1| prolyl-tRNA synthetase [Methylococcus capsulatus str. Bath] gi|81823621|sp|Q606K3|SYP_METCA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|53757466|gb|AAU91757.1| prolyl-tRNA synthetase [Methylococcus capsulatus str. Bath] Length = 583 Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 126/224 (56%), Positives = 166/224 (74%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DAEI SH+LMLR G+I + + G+Y+WLPLG K L V ++REE Sbjct: 1 MRTSQFPLNTLKEIPSDAEIVSHQLMLRAGLIRKLAAGLYTWLPLGLKVLRRVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR++ YG E+ RL DR+D+A GPTHEE++TD+ R+ Sbjct: 61 MDRAGALEVLMPVVQPAELWQESGRWEQYGPELARLHDRHDRAFCLGPTHEEIITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L E +Y+ M+V+ Sbjct: 121 ELKSYRQLPVNFYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLDQESLAQTYDAMYVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL+ P+ A++G IGG SHEF VLAD+GE + S Sbjct: 181 YSNIFSRLGLRFRPVLADTGAIGGSHSHEFHVLADSGEDAIAFS 224 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 102/165 (61%), Gaps = 3/165 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGHIF GTKYS ++AT +G+ + MG YGIG RVVAA IE +HD +GI Sbjct: 416 ARGIEVGHIFQLGTKYSAALNATVLNEEGRSQVMLMGCYGIGVSRVVAAAIEQNHDERGI 475 Query: 339 IWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +WP+++APF+++L IN++ +V R E++YA LS G +V +DD + G FA + Sbjct: 476 VWPEALAPFQVALCPINMQTSARV-RTTAERLYAELSAAGFEVLYDDRKVRPGVMFADME 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 L+G P ++++ + + +E K R + + ++ VI + R Sbjct: 535 LIGIPHRIVISERGLDSGALEYKGRRDADNQSIGIDGVIEFLRER 579 >gi|165977268|ref|YP_001652861.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|226731422|sp|B0BT03|SYP_ACTPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|165877369|gb|ABY70417.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 571 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 131/276 (47%), Positives = 173/276 (62%), Gaps = 10/276 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQ Q KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQTQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPEN 274 + ++ V + AP A D N K + L E Sbjct: 237 EAVA----VGERQAPTAEMQLVDTPNAKTINELVEQ 268 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/183 (40%), Positives = 112/183 (61%), Gaps = 4/183 (2%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K V RGIEVGHIF GTKYS M AT +G DGK + MG Sbjct: 382 VADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGKPLVMTMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG RVVAA IE HD +GIIWP D +APF ++++ + H + + E++Y L Sbjct: 442 YGIGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRTLKA 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ ++ +++ Sbjct: 502 QGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQL 561 Query: 435 INY 437 + + Sbjct: 562 LAF 564 >gi|126667243|ref|ZP_01738216.1| prolyl-tRNA synthetase [Marinobacter sp. ELB17] gi|126628188|gb|EAZ98812.1| prolyl-tRNA synthetase [Marinobacter sp. ELB17] Length = 576 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 159/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + +E P DAEI SH+LMLR G+I + + G+Y+WLP+G + L V I+REE Sbjct: 1 MRASRYLIATQKETPADAEIISHQLMLRAGLIRKLAAGLYTWLPMGLRTLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ +P +Q A+LW ESGR+D YG E+LR+ DR+ + +GPTHEEV+TD+ R+ Sbjct: 61 MDRSGAQELLMPAVQPAELWRESGRWDEYGGELLRMNDRHGREFCFGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP F+QIQ KFRDE RPRFGVMR+REF+MKDAYSF + E +Y M + Sbjct: 121 ELKSYKQLPANFFQIQTKFRDERRPRFGVMRAREFIMKDAYSFHINAESLDETYQLMHRT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL P++A+SG IGG S EF VLA +GE + S Sbjct: 181 YCAIFDRLGLDYRPVQADSGAIGGSGSQEFHVLASSGEDAIVFS 224 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 73/198 (36%), Positives = 111/198 (56%), Gaps = 3/198 (1%) Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSA 300 + L + Q P D+ N D+ P + RGIEVGHIF G KYS ++A Sbjct: 372 VHLTGVNWQRDLPLGRVEDLRNVVEGDASPCGQGTLEIRRGIEVGHIFKLGNKYSKALNA 431 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ- 359 T +GK + MG YGIG R+VAA IE +HD +GIIWPD++APF+++++ + H Sbjct: 432 TVLDENGKTATIYMGCYGIGVSRIVAASIEQNHDDRGIIWPDAIAPFRVAVVLLNGHKSP 491 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +A EK+Y +L + G DV DD E+ G +FA +L G P + +V + + +E K Sbjct: 492 TVAEAGEKLYQQLQEAGYDVLLDDRNERPGVKFADMELTGIPHRFVVSDRGLEAGTLEYK 551 Query: 420 HRLTGIREDMSLEEVINY 437 R ++D++L + IN+ Sbjct: 552 GRRDADKQDVALADAINF 569 >gi|254468329|ref|ZP_05081735.1| prolyl-tRNA synthetase [beta proteobacterium KB13] gi|207087139|gb|EDZ64422.1| prolyl-tRNA synthetase [beta proteobacterium KB13] Length = 561 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 115/218 (52%), Positives = 159/218 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P+DAE+ SH+LM+R G + + S G+Y+W+P+G + L + +IIREE Sbjct: 1 MKTSQFFISTLKEAPQDAELKSHQLMVRAGYVKRLSSGLYTWMPIGLRVLRKIESIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GA+E+ +P +Q A+LW E+GR+ +G +ML++ DR+ +GPTHEEV+TDI R Sbjct: 61 MNASGAVELLMPAIQPAELWQETGRWQQFGPQMLKINDRHQNEFCFGPTHEEVITDIARK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + Y MF + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHANENCLQKMYELMFET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF R+GL+ + A+SG IGGD SHEF VLAD+GE Sbjct: 181 YNRIFSRIGLQFRSVAADSGAIGGDASHEFHVLADSGE 218 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/160 (41%), Positives = 98/160 (61%), Gaps = 1/160 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIEVGHIF G KYS M A+ +GK + MG YGIG R+VAA IE ++D G+ Sbjct: 397 CRGIEVGHIFQLGKKYSESMQASILNEEGKSQTMTMGCYGIGVSRIVAAAIEQNNDENGM 456 Query: 339 IWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I P S+APF++ ++ I H + R KIYA L K G DV DD + G FA +DL Sbjct: 457 ILPKSIAPFELIIVPIGYHKNDKVRAQANKIYADLLKSGIDVILDDRVARPGIMFAESDL 516 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +G P ++++G K ++++KVE K R E +++ ++I++ Sbjct: 517 IGIPNRLVIGEKSLNENKVEFKSRSESNSEMINISDLIHF 556 >gi|332974215|gb|EGK11148.1| proline--tRNA ligase [Kingella kingae ATCC 23330] Length = 570 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 116/218 (53%), Positives = 158/218 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLMLR G+I ++ G+Y+W+P+G + L V AI+REE Sbjct: 1 MKASQFFISTLKEAPAEASLASHKLMLRAGLIKANASGLYTWMPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q ADLW ESGR+D YG E+LR+ DR++ + PT EE++TDI R Sbjct: 61 MNRAGAIELLMPVVQPADLWKESGRWDFYGDELLRITDRHENPFCFSPTCEEMITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY I KFRDE RPRFGVMR+REF+MKDAYSF + K +Y M+ + Sbjct: 121 EVNSYKQLPKNFYHINTKFRDERRPRFGVMRAREFVMKDAYSFHADFDSLKETYQNMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y R+F+RLGL P+ A++G IGG SHEF VLA++GE Sbjct: 181 YCRVFNRLGLNFRPVAADTGSIGGTGSHEFQVLAESGE 218 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 98/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KYS M+ATF +GK ++MG YGIG R+VAA IE ++D +GI Sbjct: 404 ARGIEVGHVFQLRDKYSKAMNATFLDNNGKSQIMEMGCYGIGVTRIVAAAIEQNNDERGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW D+++PF + ++ N K D V + A +KIYA+L G DV DD E+ G ++ Sbjct: 464 IWTDAMSPFTVVIVPMNYKKSDDV-KAAADKIYAQLQAAGVDVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P +V++G + + + VE R + +S+ +++ Sbjct: 523 LLGIPHRVVIGDRALKEGNVEYAQRRDTESQAISVNDIV 561 >gi|56475942|ref|YP_157531.1| prolyl-tRNA synthetase [Aromatoleum aromaticum EbN1] gi|81821206|sp|Q5P7T1|SYP_AZOSE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56311985|emb|CAI06630.1| prolyl-tRNA synthetase [Aromatoleum aromaticum EbN1] Length = 583 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+ L+E P DAE+ S KLMLR G I + + GIYS+LP+G + + V I+R+E Sbjct: 1 MRASQYFISTLKEAPSDAEVVSQKLMLRAGFIRKVAAGIYSYLPIGLRVIRKVEDIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+LW E+GR++ G EMLR DR+ + PT EEV+TDI R Sbjct: 61 MNRAGALELTMPLVQPAELWDETGRWEQMGAEMLRFKDRHQRDFALQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQIQ KFRDE RPRFGVMR REF MKDAYSFD + SY+ M+ + Sbjct: 121 ELKSYRQLPKNFYQIQTKFRDERRPRFGVMRGREFTMKDAYSFDRDVAAAGRSYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF RLGL + A++G IGGD SHEF V+ADTGE V+C Sbjct: 181 YCRIFDRLGLTYRAVAADTGAIGGDRSHEFQVIADTGEDAIVYC 224 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 102/186 (54%), Gaps = 3/186 (1%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + A RGIEVGH+FY GTKYS M+ATF +GK + +MG Y Sbjct: 394 ADLRNIIEGDPSPDGRGRLAIQRGIEVGHVFYLGTKYSQSMNATFLDENGKPKHFEMGCY 453 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 GIG R++ A IE +HD +GIIWPD++APF++ + + R K+Y L G Sbjct: 454 GIGVTRILGAAIEQNHDARGIIWPDAIAPFRVVVCPVGWGKSDAVRTEATKLYETLCAGG 513 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD E+ G FA +L+G P +V++G + + D E + R + L E+ Sbjct: 514 IDVILDDRDERPGVMFADWELIGVPHRVVIGDRGLKDGMAEYQGRRDAEAAKIPLAELAA 573 Query: 437 YASHRF 442 + + Sbjct: 574 FVGSKL 579 >gi|33598297|ref|NP_885940.1| prolyl-tRNA synthetase [Bordetella parapertussis 12822] gi|81836505|sp|Q7W481|SYP_BORPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33566855|emb|CAE39070.1| prolyl-tRNA synthetase [Bordetella parapertussis] Length = 576 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 121/218 (55%), Positives = 158/218 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P +AEIASH+LM R GMI + + GIY+++PLG K + + I+REE Sbjct: 1 MRASKYHLNTLKEAPAEAEIASHQLMTRAGMIRKLAGGIYTYMPLGLKVIRKIEGIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q A+LW+ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNAAGAIELLMPVVQPAELWMESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G++ SY+ M+ + Sbjct: 121 EIQSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGAQRSYDIMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RL L+ + A++G IGG SHEF V+ADTGE Sbjct: 181 YQRIFQRLSLEFRAVAADTGSIGGSRSHEFQVIADTGE 218 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 97/166 (58%), Gaps = 3/166 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGH+F+ GTKYS + ATF +GK +QMG Sbjct: 387 VADLRNVVEGDPSPDGKGALSIQRGIEVGHVFFLGTKYSEALKATFLDDNGKPAVLQMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +HD +GIIWP ++AP+++ + + + RD +Y L Sbjct: 447 YGIGVTRIVGAAIEQNHDARGIIWPRAIAPYEVVICPVGWGKSETVRDTALALYEALRAR 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD + G FA +L+G PL+V VG + +++ VE++ R Sbjct: 507 GVDVMLDDRDSRPGVMFAEWELIGVPLRVTVGERGLNEGVVELQAR 552 >gi|83746821|ref|ZP_00943869.1| Prolyl-tRNA synthetase [Ralstonia solanacearum UW551] gi|83726590|gb|EAP73720.1| Prolyl-tRNA synthetase [Ralstonia solanacearum UW551] Length = 626 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 162/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G +A+ V I+REE Sbjct: 53 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYTYMPVGLRAIRKVEQIVREE 112 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+EM +P +Q +LW E+GR+D G+E++R+ DR+++ ++ PT EEV+TDI R+ Sbjct: 113 MNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMRVKDRHERDLVIQPTSEEVVTDIART 172 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KMF + Sbjct: 173 EIRSYKQMPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDVEGMKVSYQKMFDA 232 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL + A++G IGG SHEF V+A+TGE + S + Sbjct: 233 YTRIFQRFGLAFRAVAADNGAIGGSGSHEFHVIAETGEDAIVYSPE 278 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 103/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K A RGIEVGH+F GT+YS MSATF +GK + Sbjct: 434 PEAEVADLRNVVEGDPSPDGKGSLAICRGIEVGHVFMLGTRYSESMSATFLDENGKTQPM 493 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + + R ++++A Sbjct: 494 VMGCYGIGITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAE 553 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P +V+VG + + + K+E++ R Sbjct: 554 LAAAGIDVILDDRGERPGVMFADWELIGVPFRVVVGERGLKEGKLELQGR 603 >gi|325982765|ref|YP_004295167.1| prolyl-tRNA synthetase [Nitrosomonas sp. AL212] gi|325532284|gb|ADZ27005.1| prolyl-tRNA synthetase [Nitrosomonas sp. AL212] Length = 569 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 161/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P +AE+ SHKLMLR G+I + G+Y+W+PLG + L + IIREE Sbjct: 1 MRVSQFFVSTLKEAPAEAELISHKLMLRAGLIKRLGSGLYTWMPLGLRVLRKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GA+E+ +P +Q A+LW E+GR+D +G +ML++ DR+ +GPTHEE++TD R Sbjct: 61 MNSSGAVEILMPAIQPAELWQETGRWDVFGLQMLKIKDRHKHDFCFGPTHEEIITDTVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EIKSYRQLPLNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHTNEDSLMQTYQLMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF R+GL+ + A++G IGG SHEF VLAD+GE + FC Sbjct: 181 YSRIFTRIGLQFRAVSADTGAIGGSGSHEFHVLADSGEDAIAFC 224 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 106/181 (58%), Gaps = 5/181 (2%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D+ P+ K + RGIEVGHIF TKYS M ATF G Y++MG YG Sbjct: 382 DIRNVVPGDASPDGKGILEICRGIEVGHIFQLRTKYSKIMKATFLDESGSTQYMEMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVG 376 IG R+VAA IE +HD GII+P ++APF++++I I + + QV ++ EK+Y + Sbjct: 442 IGVSRIVAAAIEQNHDEYGIIFPAAIAPFQLAIIPIGLQKNPQV-KEIVEKLYQQFLDAH 500 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P ++++G + + S +E + R E + ++E+ Sbjct: 501 IEVLLDDRDERPGVMFADMELMGIPHRIVIGERGLKQSTIEYQGRKDRSPEAIFIDEIFP 560 Query: 437 Y 437 + Sbjct: 561 F 561 >gi|207721477|ref|YP_002251917.1| prolyl-trna synthetase protein [Ralstonia solanacearum MolK2] gi|206586637|emb|CAQ17223.1| prolyl-trna synthetase protein [Ralstonia solanacearum MolK2] Length = 574 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 162/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G +A+ V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYTYMPVGLRAIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+EM +P +Q +LW E+GR+D G+E++R+ DR+++ ++ PT EEV+TDI R+ Sbjct: 61 MNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMRVKDRHERDLVIQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KMF + Sbjct: 121 EIRSYKQMPVNFYQIQNKFRDERRPRFGIMRGREFTMKDAYSFDRDVEGMKVSYQKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL + A++G IGG SHEF V+A+TGE + S + Sbjct: 181 YTRIFQRFGLAFRAVAADNGAIGGSGSHEFHVIAETGEDAIVYSPE 226 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 102/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K A RGIEVGH+F GT+YS MSATF +GK + Sbjct: 382 PEAEVADLRNVVEGDPSPDGKGSLAICRGIEVGHVFMLGTRYSESMSATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + + R ++++A Sbjct: 442 VMGCYGIGITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G FA +L+G P +V+VG + + + K+E++ R Sbjct: 502 LVAAGIDVILDDRGERPGVMFADWELIGVPFRVVVGERGLKEGKLELQGR 551 >gi|269119306|ref|YP_003307483.1| prolyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] gi|268613184|gb|ACZ07552.1| prolyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] Length = 571 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 133/284 (46%), Positives = 181/284 (63%), Gaps = 9/284 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+ +E P++AE+ SHKLMLR MI + + G+YS+LPLG + L V I+REE Sbjct: 1 MRLSKAFVKTYKEAPKEAEVISHKLMLRASMIKRLASGVYSYLPLGNRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ +P LQ ADLW ESGR+ +YG E++R+ DR+++ GPTHEEV+TDI R+ Sbjct: 61 MDKSGAQEVFMPVLQPADLWKESGRWIAYGPELMRMKDRHEREFALGPTHEEVVTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF T E Y M + Sbjct: 121 EINSYKDLPMNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHTTHESLDEEYLNMKTT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSE---- 235 Y IF R GL + A+SG IGGD++HEF+VLA++GE V +C D D+ E Sbjct: 181 YENIFTRCGLDFRAVEADSGSIGGDVTHEFMVLAESGEDDVLYC--DSCDYAANKEKATS 238 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 DF + +E P T + + F ++P +K V A Sbjct: 239 KADFKESDEEAKSIELVETPNTWT--IEDVAAFFNIPTSKTVKA 280 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 77/191 (40%), Positives = 110/191 (57%), Gaps = 7/191 (3%) Query: 256 YAATSDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 Y T D+ K + P ARGIEVGHIF GTKYS M A +GK ++ Sbjct: 382 YDMTGDIREAKEGEKCPRCGGTLKIARGIEVGHIFELGTKYSEAMKANVLDENGKQATLK 441 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYAR 371 MG YGIG R+++A IE ++D GIIWP ++AP+++ +I NIK DQV E +Y Sbjct: 442 MGCYGIGVSRIMSAAIEQNYDENGIIWPVNIAPYEVDVIIPNIKDKDQV--RVAEDVYQL 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L DV DD E+ G +F ADL+GFP+++I G K +++ KVE+K R TG E + + Sbjct: 500 LKDHNIDVILDDRDERAGFKFKDADLIGFPMKIITG-KSIAEGKVEVKDRKTGNTEIVEI 558 Query: 432 EEVINYASHRF 442 +++Y + Sbjct: 559 GTLLDYVKNHL 569 >gi|196008377|ref|XP_002114054.1| hypothetical protein TRIADDRAFT_58133 [Trichoplax adhaerens] gi|190583073|gb|EDV23144.1| hypothetical protein TRIADDRAFT_58133 [Trichoplax adhaerens] Length = 473 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 144/454 (31%), Positives = 247/454 (54%), Gaps = 36/454 (7%) Query: 4 SKYFLPILQENPRDAE--IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 S F+P+++ + + A ++ ++ G++ Q G+Y LP+ +A+ + ++ EE Sbjct: 33 SSLFIPMMRTSDQSASASVSRKTILENAGLLKQSRPGLYYILPVALRAMYKLIKVVDEEM 92 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 R G ++ P L ADLW SGR+D+ G EM +L DR+++ GPTHEE ++++ ++ Sbjct: 93 TRIGGSKLGTPCLIPADLWQSSGRWDTLGAEMFKLKDRHNRHYCLGPTHEESISELVGTY 152 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + S +P YQI KFRDE+RPR G+ R+REF MKD YSFD+ E S +SY + +Y Sbjct: 153 LNSKNMMPLRLYQIDRKFRDEIRPRLGLRRAREFWMKDMYSFDIDKEASLNSYEIICEAY 212 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +RIF+RLGL + + A+SG +GGD SHEF ++AD GE D+ Sbjct: 213 VRIFNRLGLNVVKVVADSGAMGGDTSHEFHLIADDGE---------------------DE 251 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA-RGIEVGHIFYFGTKYSLPMSA 300 I+ + + + DV E +NK + RG+E+GH FY GTKYS S Sbjct: 252 ILICDQCHKAMNMETLKSGDVMAECNLCEGKQNKNIQKYRGVEIGHAFYLGTKYSKAASV 311 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA---- 356 T+ + YV+MGSYGIG R++ A +E I WP + P+ I ++ + + Sbjct: 312 TYTDENNCKVYVEMGSYGIGVTRLLDAALEVQSTCNKIRWPSVITPYNICIVPLGSPKDN 371 Query: 357 HDQVCRDACEKIYARLS--KVGCDVFWDD---MGEQI--GSQFAVADLLGFPLQVIVGSK 409 Q +++Y +L+ K+ +V DD + + + G++ A LLG+P +I+G + Sbjct: 372 SSQQLLQLAQQLYDKLAVGKLQNEVVIDDRIYLSKTVGPGTRLRQATLLGYPYLIILGKQ 431 Query: 410 FVSDSK-VEIKHRLTGIREDMSLEEVINYASHRF 442 + +E++ +L G ++++ ++ ++++ + Sbjct: 432 ALQKQGYIELEDQLNGSKQNIHIDNIVDHIQQVY 465 >gi|301629493|ref|XP_002943874.1| PREDICTED: prolyl-tRNA synthetase-like [Xenopus (Silurana) tropicalis] Length = 657 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 161/226 (71%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLMLR G+I + GIYS++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMLRAGLIKKLGAGIYSYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E ++P +Q A+LW E+GR++ G E+LR+ DR+D+ + PT EEV+TDI R Sbjct: 61 MDRAGAAECAMPVVQPAELWQETGRFEKMGPELLRIKDRHDRDFVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD P +K SY M + Sbjct: 121 ELRSYKQLPRNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDPASAKASYQVMAAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y RIF R GL+ + A+SG IGGDLS EF V+A TGE V+C + Sbjct: 181 YCRIFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPQ 226 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 +D+ N D P+ + R IEVGH+FY GTKYS M ATF G DGK ++ Sbjct: 393 VADLRNVVAGDKSPDGAGELCIERAIEVGHVFYLGTKYSKAMGATFLGEDGKPAFL 448 >gi|229086371|ref|ZP_04218548.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228696983|gb|EEL49791.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 566 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 125/253 (49%), Positives = 167/253 (66%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LPLG K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPLGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P LQ+A+LW ESGR+ SYG E++R+ DRND+ G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPALQAAELWQESGRWYSYGSELMRMKDRNDREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSRLYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+ L+D GE D S+ +D+ Sbjct: 181 YSNIFSRCGLNFRAVIADSGAMGGKDTHEFMALSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVASYT 243 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKMKPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY+ L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREVGETIYSSLQEQGYEVLLDDRTERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R T ++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEELHTYIAN 563 >gi|163854968|ref|YP_001629266.1| prolyl-tRNA synthetase [Bordetella petrii DSM 12804] gi|226699121|sp|A9I4I5|SYP_BORPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|163258696|emb|CAP40995.1| proS [Bordetella petrii] Length = 576 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 121/226 (53%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P +AE+ASH+LM R GMI + + GIY+++PLG K + + AI+R E Sbjct: 1 MRASTYHLNTLKEAPAEAEVASHRLMTRAGMIRKLAGGIYTYMPLGLKVIRKIEAIVRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE+ +P +Q A+LW ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MDAAGAIELLMPVVQPAELWQESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G++ SY+KM+ + Sbjct: 121 EIHSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGAQQSYDKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y+RIF RLGL+ + A++G IGG SHEF V+ADTGE + + D Sbjct: 181 YMRIFERLGLQFRAVAADTGSIGGSRSHEFQVIADTGEDLLVYNPD 226 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 96/166 (57%), Gaps = 3/166 (1%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + RGIEVGH+F+ GTKYS + ATF GK +QMG Sbjct: 387 VADLRNVVEGDPAPDGAGRLAIQRGIEVGHVFFLGTKYSEALKATFLDETGKPALLQMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+ A IE +HD +GIIWP ++APF++ + + ++ R+ K+Y L Sbjct: 447 YGIGITRIAGAAIEQNHDERGIIWPRAIAPFEVVICPVGWGKNETVRNESVKLYDALRAR 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD + G FA +L+G PL+V VG + ++D VE++ R Sbjct: 507 GVDVILDDRDARPGVMFAEWELIGVPLRVTVGERGLNDGVVELQAR 552 >gi|300690369|ref|YP_003751364.1| proline--tRNA ligase [Ralstonia solanacearum PSI07] gi|299077429|emb|CBJ50055.1| Proline--tRNA ligase [Ralstonia solanacearum PSI07] Length = 574 Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 118/226 (52%), Positives = 163/226 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G +A+ V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYTYMPVGLRAIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+EM +P +Q +LW E+GR+D G+E++R+ DR+++ ++ PT EEV+TDI R+ Sbjct: 61 MNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMRVKDRHERDLVIQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KM+ + Sbjct: 121 EIRSYKQMPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDVEGMKVSYGKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + A++G IGG SHEF V+A+TGE + S + Sbjct: 181 YTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIAETGEDAIVYSPE 226 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 103/170 (60%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K A RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 382 PEAEVADLRNVVEGDPSPDGKGALALCRGIEVGHVFMLGTRYSESMNATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + + R ++++A Sbjct: 442 VMGCYGIGITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G DV DD GE+ G FA +L+G P +V+VG + + + K+E++ R Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPFRVVVGERGLKEGKLELQGR 551 >gi|194207413|ref|XP_001492689.2| PREDICTED: prolyl-tRNA synthetase 2, mitochondrial (putative) [Equus caballus] Length = 472 Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 146/410 (35%), Positives = 218/410 (53%), Gaps = 34/410 (8%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +P L+ D S +LML+ G+IH S G Y LP +AL+ + +I +E G Sbjct: 53 VPSLEGGSGDLTCKSQRLMLQVGLIHPASPGCYHLLPYTVRALEKLVRVIDQEMRAIGGQ 112 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH-IKSYR 126 ++S+P+L A+LW + R+D GKE+LRL DR+ K GPTHEE +T + S SY+ Sbjct: 113 KVSMPSLSPAELWRATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAVTALVASQKTLSYK 172 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LPF YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ +Y + +Y +F Sbjct: 173 QLPFLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAARQTYGLVCDAYSSLFA 232 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 RLGL + ++A G IGG +SHEF + AD GE Q F + + ++ +LN Sbjct: 233 RLGLPCVKVQAGVGSIGGTMSHEFQLPADVGEDQ---------FAVCPSCSFSANVETLN 283 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + Q P + +GIEVGH FY GTKYS +A F Sbjct: 284 --LSQTNCPAC---------------QGPLTETKGIEVGHTFYLGTKYSSVFNAQFTNVH 326 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDA 364 GK +MG YG+G R++AA IE + WP +AP+++ LI K + ++V + Sbjct: 327 GKPSLAEMGCYGLGVTRILAAAIEVLSTEYCLRWPGLLAPYQVCLIPPKKGSKEEVATEL 386 Query: 365 CEKIYARLS----KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSK 409 +Y ++ ++ +V DD IG++ A+ G+P +I G + Sbjct: 387 AGHLYDHITEAVPQLRGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKR 436 >gi|104783084|ref|YP_609582.1| prolyl-tRNA synthetase [Pseudomonas entomophila L48] gi|123380820|sp|Q1I6D7|SYP_PSEE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|95112071|emb|CAK16798.1| prolyl-tRNA synthetase [Pseudomonas entomophila L48] Length = 571 Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 159/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+D+ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHDRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNMYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL P++A++G IGG SHEF VLA +GE V S Sbjct: 181 YSNIFTRLGLDFRPVQADTGSIGGSYSHEFHVLASSGEDDVIFS 224 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 76/192 (39%), Positives = 112/192 (58%), Gaps = 4/192 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + V RGIEVGHIF GTKYS + G +GK + Sbjct: 378 PVPQVADLRNVVEGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEALKCQVLGENGKPVVL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ V R+A +K+YA L Sbjct: 438 SMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETDVVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + ++D +E KHR + + Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLADGNLEYKHRTESEAQALP 557 Query: 431 LEEVINYASHRF 442 L EV+ + R Sbjct: 558 LNEVLTFLQARI 569 >gi|254516715|ref|ZP_05128774.1| prolyl-tRNA synthetase [gamma proteobacterium NOR5-3] gi|219675138|gb|EED31505.1| prolyl-tRNA synthetase [gamma proteobacterium NOR5-3] Length = 571 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 159/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ + +E P DAEI SH+LMLR G+I + S G+Y+W+P+G K L V ++REE Sbjct: 1 MRSSEFLITTHKETPADAEIVSHRLMLRAGLIRKLSSGLYTWMPMGLKVLRKVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM++P +Q A+LW ESGR++ YG E+LR+ DR+++ GPTHEEV+TDI R+ Sbjct: 61 MDAAGALEMAMPMVQPAELWQESGRWEQYGPELLRIQDRHNRDFCLGPTHEEVITDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K RDE+RPRFG+MR+REFLMKDAYSF + +Y M + Sbjct: 121 EISSYKQLPLNLYQIQNKVRDEIRPRFGIMRAREFLMKDAYSFHSDQASLEETYQVMHGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y R+F RLGL P+ A+SG IGG+ SHEF VLAD+GE + S Sbjct: 181 YSRVFERLGLDFRPVMADSGSIGGNTSHEFHVLADSGEDAIAFS 224 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 94/143 (65%), Gaps = 1/143 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M+A +G++ + MG YGIG R+VAA IE +HD +GII Sbjct: 404 RGIEVGHIFQLGTKYSEAMNARVLDENGRNVTISMGCYGIGVSRIVAAAIEQNHDDRGII 463 Query: 340 WPDSVAPFKISLINIKAHDQVC-RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP+++ PF+++++ + H +A E ++A+ + G DV DD E+ G +FA +LL Sbjct: 464 WPNAMTPFQLAIVPLNMHKSTAVAEAAEALHAQCLEEGIDVLMDDRNERPGVKFADMELL 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P ++++G + +++ ++E + R Sbjct: 524 GIPHRIVIGDRSLAEGELEYQGR 546 >gi|310779485|ref|YP_003967818.1| prolyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] gi|309748808|gb|ADO83470.1| prolyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] Length = 570 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 161/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S ++ L+E P+DAE+ SHKLMLR GMI + + G+Y++LPLG KAL V I+REE Sbjct: 1 MKFSNLYVKTLKETPKDAEVISHKLMLRAGMIKKLASGVYTYLPLGYKALRKVEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G+ E+ +P LQ +++W ESGR+D+ G EM+R+ DR+D+ + GPTHEEV+TDI R+ Sbjct: 61 MERAGSQEIFMPVLQPSEIWQESGRWDTMGPEMMRIKDRHDREFVLGPTHEEVITDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP YQIQ KFRDE RPRFG+MRSREFLMKDAYSF + E + + M + Sbjct: 121 DISSYKSLPMNLYQIQTKFRDERRPRFGLMRSREFLMKDAYSFHASEECLDNEFENMKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GLK + A+SG IGG S EF VLA++GE + ++C Sbjct: 181 YTRIFERCGLKFRSVEADSGAIGGSGSQEFHVLAESGEDEIIYC 224 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 75/161 (46%), Positives = 99/161 (61%), Gaps = 5/161 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE GH+F GTKYS M ATF +GK + + MG YGIG R AA IE ++D G Sbjct: 404 SARGIETGHVFKLGTKYSESMKATFLDVNGKSNVMMMGCYGIGVSRTTAAAIEQNYDENG 463 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP+ + ++ N+K DQV EKIY L + G D DD E+ G +F A Sbjct: 464 IIWPSAIAPYVVDVVPANMKNKDQVA--LGEKIYTELLEAGIDTVLDDRNERPGFKFKDA 521 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DL+GFP +V+ G K ++ +EIK R TG D+ EEV+ Sbjct: 522 DLIGFPFKVVSG-KQAAEGIIEIKIRKTGETLDVKSEEVVT 561 >gi|253583421|ref|ZP_04860619.1| proline-tRNA ligase [Fusobacterium varium ATCC 27725] gi|251833993|gb|EES62556.1| proline-tRNA ligase [Fusobacterium varium ATCC 27725] Length = 569 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 122/224 (54%), Positives = 160/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AE ASHKL+LR GMI + + G+Y++LPLG KAL V I+REE Sbjct: 1 MRFSKSYIKTLKETPKEAETASHKLLLRAGMIKKLTSGVYTYLPLGYKALRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G+ E+ +P LQ A+LW ESGR+D G M++L DRN + + GPTHEEV+TD+ R+ Sbjct: 61 MNRAGSQEILMPVLQPAELWKESGRWDVMGPLMMKLQDRNKRDFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP + YQIQ KFRDE+RPRFG+MR REF+MKD YSF T E + M + Sbjct: 121 DISSYKSLPLSLYQIQTKFRDEIRPRFGLMRGREFVMKDGYSFHATVESLDEEFLNMRDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GLK P+ A+SG IGG S EF VLAD+GE + ++C Sbjct: 181 YSRIFSRCGLKFRPVEADSGAIGGSGSQEFHVLADSGEDEIIYC 224 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/161 (44%), Positives = 99/161 (61%), Gaps = 5/161 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIEVGHIF G KYS M+ATF G+ + MG YGIG R +A+ IE ++D G Sbjct: 403 SARGIEVGHIFKLGDKYSKAMNATFLDDKGESKVMIMGCYGIGVSRTLASAIEQNNDEFG 462 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP+ + +I NIK +QV E+IY L G + DD E+ G +F A Sbjct: 463 IIWPTALAPYIVDVIPANIKNEEQV--KVAEEIYEALLNDGIEAMIDDRDERPGFKFKDA 520 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DL+GFP +V+ G K + VE+K R TG ++S ++V++ Sbjct: 521 DLIGFPFKVVSGKK-AGEGIVELKIRRTGETIELSKDDVVS 560 >gi|188587611|ref|YP_001919651.1| prolyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] gi|226699131|sp|B2UY89|SYP_CLOBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|188497892|gb|ACD51028.1| prolyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] Length = 570 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR+GMI + + GIY+++PLG KAL V IIREE Sbjct: 1 MKMSNMLISTLREVPAEAEIDSHKLMLRSGMIRKMASGIYNYMPLGLKALKKVEDIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E + A+LW SGR+D+YG EM R+ DRN++ GPTHEEV TDI ++ Sbjct: 61 MNEAGAQEFLASAMIPAELWQSSGRWDAYGAEMFRVKDRNERDFCLGPTHEEVFTDIAKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD +G SYNKM+ + Sbjct: 121 EIKSYKQLPVNLYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDKDQQGLDLSYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y++IF+R GL + + A+SG IGG S EF+V ++ GE VFC++ Sbjct: 181 YVKIFNRCGLDAKCVEADSGAIGGSNSAEFMVKSEVGEDDIVFCTE 226 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/176 (38%), Positives = 99/176 (56%), Gaps = 2/176 (1%) Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 S+ K +RG EVGHIF GTKYS M A F +GK+ MG YGIG R +A++I Sbjct: 392 SICGGKLTISRGTEVGHIFKLGTKYSEAMDAKFIAENGKEAPFIMGCYGIGVTRTMASII 451 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 E +D GI+WP +VAP+ +S+I + D+ K+Y L +G + DD E+ G Sbjct: 452 EQHNDESGIVWPLAVAPYHVSVIAVNVKDEEQVKIATKLYEDLKSIGVEALLDDRNERAG 511 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 +F ++++G P+++ VG K V D +VE K R TG E + +E+V F N Sbjct: 512 VKFKDSEIMGIPMRITVGKKIV-DGEVEFKLR-TGDMEVVKIEDVCQIVKGEFDKN 565 >gi|114152232|sp|Q3IGT7|SYP_PSEHT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 574 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 154/224 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYILATLKETPSDAEIVSHQLMLRAGMIRRVASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ AIEM +P +Q ADLW ESGR+D +G E++R DR+++ GPTHEEV+TD R Sbjct: 61 MNKANAIEMLMPVIQPADLWEESGRWDEFGPELMRFTDRHNRTFALGPTHEEVITDFVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ K RDE RPRFGVMR+REF MKDAYSF L+ E +Y M + Sbjct: 121 EISSYKQLPISLYQIQTKVRDERRPRFGVMRAREFTMKDAYSFHLSDECLDATYQVMHKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RL L P+ A++G IGG +SHEF VLA++GE + S Sbjct: 181 YCNIFERLNLDYRPVIADTGSIGGSVSHEFHVLAESGEDAIAFS 224 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 93/158 (58%), Gaps = 1/158 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M A GK+ + MG YGIG R+VAA IE ++D GII Sbjct: 409 RGIEVGHIFQLGTKYSQAMKAGVLNESGKNQIMTMGCYGIGVSRIVAAAIEQNNDQYGII 468 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +APF ++++ + H D +Y L G DV +DD E+ G F +L+ Sbjct: 469 WPQPIAPFDLAIVPMNMHKSHRIPDIATNLYQGLKDAGLDVLFDDRKERPGVMFNDMELI 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P +++G + + ++KVE+K+R TG + + ++ I+ Sbjct: 529 GVPFTLVIGERNLDENKVELKNRRTGEKLMIDIDTAID 566 >gi|124265710|ref|YP_001019714.1| prolyl-tRNA synthetase [Methylibium petroleiphilum PM1] gi|152112930|sp|A2SD40|SYP_METPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|124258485|gb|ABM93479.1| prolyl-tRNA synthetase [Methylibium petroleiphilum PM1] Length = 581 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIYS++P+G + + V AIIREE Sbjct: 1 MKASQFFVSTLKEAPADAEITSHKLMMRAGMIKRLGAGIYSYMPMGLRVIRKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR++ G E++R+ DR+D+ I PT EEV+TDI R Sbjct: 61 MNRAGAVELLMPVVQPAELWQETGRFEKMGPELMRVKDRHDRDFIIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP FY IQ KFRDE RPRFGVMR REF MKDAYSFD + SY+ M+ + Sbjct: 121 ELRSYRQLPKNFYHIQTKFRDERRPRFGVMRGREFTMKDAYSFDRDEAAAGRSYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL + A++G IGGD SHEF V+A+TGE V+C Sbjct: 181 YGRIFDRFGLSYRAVAADTGAIGGDRSHEFQVIAETGEDAIVYC 224 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 5/190 (2%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N + D P+ K V A RGIEVGH+FY GTKYS M+AT+ GK ++MG Sbjct: 393 VADIRNAVVGDPSPDGKGVLAIQRGIEVGHVFYLGTKYSAAMNATYLDETGKPRLMEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC--RDACEKIYARLSK 374 YGIG R++ A IE HD +GI+WP ++APF++ + I +D+ R A + ++ L Sbjct: 453 YGIGVTRILGAAIEQRHDARGIVWPTAIAPFEVVICPI-GYDRSAEVRQAADTLHDELQA 511 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G D+ DD GE+ G+ FA +L+G P +V++ + + + +VE++ R +++ EV Sbjct: 512 LGMDLMLDDRGERPGAMFADWELIGIPQRVVISDRGLKEGQVELQGRQEAEAGKLAVAEV 571 Query: 435 INYASHRFSN 444 + R + Sbjct: 572 VAQLRARLRD 581 >gi|251778178|ref|ZP_04821098.1| proline--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082493|gb|EES48383.1| proline--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 570 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR+GMI + + GIY+++PLG KAL V IIREE Sbjct: 1 MKMSNMLISTLREVPAEAEIDSHKLMLRSGMIRKMASGIYNYMPLGLKALKKVEDIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E + A+LW SGR+D+YG EM R+ DRN++ GPTHEEV TDI ++ Sbjct: 61 MNEAGAQEFLASAMIPAELWQSSGRWDAYGAEMFRVKDRNERDFCLGPTHEEVFTDIAKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD +G SYNKM+ + Sbjct: 121 EIKSYKQLPVNLYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDKDQQGLDLSYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y++IF+R GL + + A+SG IGG S EF+V ++ GE VFC++ Sbjct: 181 YVKIFNRCGLDAKCVEADSGAIGGSNSAEFMVKSEVGEDDIVFCTE 226 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/176 (38%), Positives = 99/176 (56%), Gaps = 2/176 (1%) Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 S+ K +RG EVGHIF GTKYS M A F +GK+ MG YGIG R +A++I Sbjct: 392 SICGGKLTISRGTEVGHIFKLGTKYSEAMDAKFIAENGKEAPFIMGCYGIGVTRTMASII 451 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 E +D GI+WP +VAP+ +S+I + D+ K+Y L +G + DD E+ G Sbjct: 452 EQHNDESGIVWPLAVAPYHVSVIAVNVKDEEQVKIATKLYEDLKSIGVEALLDDRNERAG 511 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 +F ++++G P+++ VG K V D +VE K R TG E + +E+V F N Sbjct: 512 VKFKDSEIMGIPMRITVGKKIV-DGEVEFKLR-TGDMEVVKIEDVCQIVKGEFDKN 565 >gi|121635048|ref|YP_975293.1| prolyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|152112936|sp|A1KUG4|SYP_NEIMF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120866754|emb|CAM10507.1| prolyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|325138239|gb|EGC60808.1| prolyl-tRNA synthetase [Neisseria meningitidis ES14902] Length = 570 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 180/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + TA A + VH N K +SL E Sbjct: 237 PTLPLKG---ERTAAQAELTKVHTPNVKTIESLVE 268 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDAV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 561 >gi|119504253|ref|ZP_01626333.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] gi|119459761|gb|EAW40856.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] Length = 569 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DAEI SH+LMLR G+I + + GIY+W+PLG + + V ++REE Sbjct: 1 MRASQFLLSTLKETPADAEIISHQLMLRAGLIRRVAAGIYNWMPLGLRVIRRVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+S+P +Q A+LW+ESGR++ YG E+ RL DR+++ GPTHEE++T + RS Sbjct: 61 MCRAGALEISMPVVQPAELWLESGRWEQYGPELARLQDRHNRDFCLGPTHEEIITALGRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP F+QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + +Y +M + Sbjct: 121 EIKSYKQLPLNFFQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHADQVSLEQTYWRMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL + A++G IGG SHEF VLAD+GE + S Sbjct: 181 YTAIFTRLGLNFRSVEADTGSIGGSHSHEFHVLADSGEDAIAFS 224 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 108/182 (59%), Gaps = 3/182 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P T+D+ D+ P + RGIEVGHIF GTKYS M A +GK + Sbjct: 376 PLIETADIREVIAGDASPCGQGALEIRRGIEVGHIFQLGTKYSEAMKAVVLNDEGKSVPM 435 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIWPD++APF+++L+ + + A E +Y + Sbjct: 436 AMGCYGIGVTRIVAAAIEQNHDDQGIIWPDAMAPFEVALVPLNMDKSEAVATATEALYEQ 495 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L +G +VF DD E+ G +FA +L+G P++V +G + +++ +E++ R + ++ + + Sbjct: 496 LLTMGVEVFMDDRKERPGVKFAQMELIGIPVRVTLGDRSLAEGNIELQERTSDQKQLIPV 555 Query: 432 EE 433 E Sbjct: 556 SE 557 >gi|187933014|ref|YP_001884453.1| prolyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B] gi|226699132|sp|B2TIF5|SYP_CLOBB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|187721167|gb|ACD22388.1| proline--tRNA ligase [Clostridium botulinum B str. Eklund 17B] Length = 570 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR+GMI + + GIY+++PLG KAL V IIREE Sbjct: 1 MKMSNMLISTLREVPAEAEIDSHKLMLRSGMIRKMASGIYNYMPLGLKALKKVEDIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E + A+LW SGR+D+YG EM R+ DRN++ GPTHEEV TDI ++ Sbjct: 61 MNEAGAQEFLASAMIPAELWQSSGRWDAYGAEMFRVKDRNERDFCLGPTHEEVFTDIAKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD +G SYNKM+ + Sbjct: 121 EIKSYKQLPVNLYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDKDQQGLDLSYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y++IF+R GL + + A+SG IGG S EF+V ++ GE VFC++ Sbjct: 181 YVKIFNRCGLDAKCVEADSGAIGGSNSAEFMVKSEVGEDDIVFCTE 226 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 2/167 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RG EVGHIF GTKYS M A F +GK+ MG YGIG R +A++IE +D GI Sbjct: 401 SRGTEVGHIFKLGTKYSEAMDAKFIAENGKEAPFIMGCYGIGVTRTMASIIEQHNDENGI 460 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAP+ +S+I + D+ K+Y L +G + DD E+ G +F ++++ Sbjct: 461 VWPLAVAPYHVSVIAVNVKDEEQVKIATKLYEDLKSMGVEALLDDRNERAGVKFKDSEIM 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G P+++ VG K V D +VE K R+ G E + +E+V F N Sbjct: 521 GIPMRITVGKKIV-DGEVEFKLRI-GDMEVVKIEDVCQMVKGEFDKN 565 >gi|254805135|ref|YP_003083356.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha14] gi|254668677|emb|CBA06388.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha14] Length = 570 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 180/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + TA A + VH N K +SL E Sbjct: 237 PTLPLKG---ERTAAQAELTKVHTPNVKTIESLVE 268 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 561 >gi|77164414|ref|YP_342939.1| prolyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|254434306|ref|ZP_05047814.1| prolyl-tRNA synthetase [Nitrosococcus oceani AFC27] gi|114152222|sp|Q3JCN7|SYP_NITOC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|76882728|gb|ABA57409.1| Prolyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|207090639|gb|EDZ67910.1| prolyl-tRNA synthetase [Nitrosococcus oceani AFC27] Length = 574 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 120/221 (54%), Positives = 157/221 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAEI SH+LMLR I + + G+Y+WLPLG + L V IIREE Sbjct: 1 MRTSQYLLTTTRETPADAEIISHQLMLRGSFIRRLAAGLYTWLPLGLRVLRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ +P +Q A+LW E+GR++ YG E+LR DR+ + +GPTHEEV+TD+ R Sbjct: 61 MDKAGAQEVLMPAVQPAELWRETGRWEQYGPELLRFTDRHQRFFCFGPTHEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQLKFRDE+RPRFGVMRSREFLMKDAYSF +YN+M+ + Sbjct: 121 EIRSYKQLPANFYQIQLKFRDEIRPRFGVMRSREFLMKDAYSFHPDQTSLAQTYNQMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R+GL ++A++G IGG SHEF VLA +GE + Sbjct: 181 YSRIFDRIGLTFRAVQADTGAIGGKTSHEFHVLAASGEDAI 221 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 3/185 (1%) Query: 255 PYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +T+D+ N D P E ARGIEVGHIF G KYS M+AT G+ + Sbjct: 377 PEPSTADIRNVVDGDPSPDGEGTLSIARGIEVGHIFQLGEKYSQAMNATVLDETGRAISL 436 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD GIIWP S+APF+++L+ I AH ++ +++Y Sbjct: 437 AMGCYGIGVSRVVAAAIEQNHDEHGIIWPASIAPFQLALVPINAHKSARVKEMSDRLYTE 496 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD + G FA DL+G P ++++ + + ++ VE K R G + L Sbjct: 497 LQAAGFEVLLDDRQLRPGVIFADMDLIGIPYRLVISERGLENNTVEYKRRQDGKTCAIQL 556 Query: 432 EEVIN 436 + I+ Sbjct: 557 DNFIS 561 >gi|88860213|ref|ZP_01134852.1| prolyl-tRNA synthetase [Pseudoalteromonas tunicata D2] gi|88818207|gb|EAR28023.1| prolyl-tRNA synthetase [Pseudoalteromonas tunicata D2] Length = 573 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 116/221 (52%), Positives = 159/221 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V AI+R+E Sbjct: 1 MRTSQYILATLKEVPSDAEIISHQLMLRAGMIRRLASGLYTWLPSGLRVLRKVEAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIEM +P +Q ADLW+ESGR++ +G E+LR+ DR+++ GPTHEEV+T+ R Sbjct: 61 MEKAGAIEMLMPVIQPADLWIESGRWEQFGPELLRIKDRHNREFALGPTHEEVITEFVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ K RDE+RPRFGVMR+REF MKDAYSF L+ E ++Y M + Sbjct: 121 EVSSYKQLPLNLFQIQTKVRDEVRPRFGVMRAREFTMKDAYSFHLSDECLANTYAIMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y +F R+GL+ P+ A++G IGG +SHEF VLA++GE + Sbjct: 181 YCNVFERIGLEYRPVIADTGSIGGSVSHEFHVLAESGEDAI 221 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 85/143 (59%), Gaps = 1/143 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M A GK+ + MG YGIG R+VAA IE + D KGI+ Sbjct: 409 RGIEVGHIFQLGTKYSDAMKAGVLNETGKNQIMTMGCYGIGVSRIVAAAIEQNFDAKGIV 468 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF+I+++ + H E+IY L G +V +DD E+ G F +L+ Sbjct: 469 WPKAIAPFQIAIVPMNMHKSHRIPAVAERIYQELKAAGIEVLFDDRKERPGVMFNDMELI 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P +++G + + D+ VE K R Sbjct: 529 GIPHTLVIGERNLDDNCVEYKSR 551 >gi|308389457|gb|ADO31777.1| prolyl-tRNA synthetase [Neisseria meningitidis alpha710] gi|325130423|gb|EGC53187.1| prolyl-tRNA synthetase [Neisseria meningitidis OX99.30304] gi|325201951|gb|ADY97405.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240149] Length = 570 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 180/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + TA A + VH N K +SL E Sbjct: 237 PTLPLKG---ERTAAQAELTKVHTPNVKTIESLVE 268 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 561 >gi|212639527|ref|YP_002316047.1| prolyl-tRNA synthetase [Anoxybacillus flavithermus WK1] gi|212561007|gb|ACJ34062.1| Prolyl-tRNA synthetase [Anoxybacillus flavithermus WK1] Length = 568 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 127/264 (48%), Positives = 175/264 (66%), Gaps = 7/264 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F+P L+E P DAEI SH+L+LR G I Q++ G+YS+LPLG++ L + AIIREE Sbjct: 5 MKQSMSFIPTLREVPADAEIKSHQLLLRAGFIRQNASGVYSFLPLGKRVLQKIEAIIREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P LQ A+LW ESGR+ SYG E++RL DR+++ G THEEV+T + R Sbjct: 65 MERAGAVELLMPALQQAELWQESGRWYSYGPELMRLKDRHERDFALGATHEEVITALVRD 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E YNKM+ + Sbjct: 125 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASHESLDEVYNKMYEA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F R GL + A+SG +GG +HEF+VL+D GE + S D D+ + N + Sbjct: 185 YANVFRRCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYS-DSSDY---AANIEMA 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHN 264 +I + E+ P+A VH Sbjct: 241 PVI---TTYERSDEPHAPLEKVHT 261 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 131/242 (54%), Gaps = 22/242 (9%) Query: 200 GPIGGDLSHEFIVLADTGETQVF---CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 GPIG + ++ +VLAD + C + + N D D + A Y Sbjct: 338 GPIG--VRNDVLVLADHAVKAIVNGVCGANEAHYHYKGVNPDRD-----------FVAQY 384 Query: 257 AATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A DV + D P+ K ARGIEVGH+F GT+YS M+AT+ +G+ + M Sbjct: 385 A---DVRFIQEGDPSPDGKGTIRFARGIEVGHVFKLGTRYSEAMNATYLDENGRTQPMIM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R +AA+ E +D G+IWP +VAPF + LI++ R+ ++ Y +L + Sbjct: 442 GCYGIGVSRTLAAIAEQYNDEHGLIWPTAVAPFHVHLISVNPKVDEQRELADEWYVQLQQ 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD E+ G +FA +DL+G P++V VG K S+ VE+K R TG E++ + ++ Sbjct: 502 EGFEVLYDDRAERPGVKFADSDLIGLPVRVTVG-KRASEGIVEVKVRKTGETEEVHVSQL 560 Query: 435 IN 436 + Sbjct: 561 VE 562 >gi|115638543|ref|XP_783415.2| PREDICTED: similar to Prolyl-tRNA synthetase (mitochondrial)(putative) isoform 1 [Strongylocentrotus purpuratus] gi|115931464|ref|XP_001186319.1| PREDICTED: similar to Prolyl-tRNA synthetase (mitochondrial)(putative) [Strongylocentrotus purpuratus] Length = 569 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 156/447 (34%), Positives = 230/447 (51%), Gaps = 46/447 (10%) Query: 2 RRSKYFLP--ILQENPR--DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAII 57 R SK + P +L E + D + SH+LM+ G+I Q S G + LPL +AL+ + +I Sbjct: 137 RVSKMYQPSFVLPEGSKVADVKCKSHRLMMEAGLIRQASPGTFHLLPLAMRALEKLIKVI 196 Query: 58 REEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDI 117 E + G ++++P + + LW SGRY YG E++ L DR++ GPTHEE +TDI Sbjct: 197 DTEMQKVGGQKIAMPGMTPSSLWKTSGRYSDYGPELITLQDRHNVDYCLGPTHEEAVTDI 256 Query: 118 FRSH-IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 S++ LP YQI KFRDE+RPR+G++R REFLMKD Y+FD EG++ +Y Sbjct: 257 VAGEKTLSHKRLPIKLYQITNKFRDEMRPRYGLLRGREFLMKDLYTFDSNLEGAEETYRS 316 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSE 235 + +Y RIF L L + +G IGG SHEF +L++ GE V+ CS+ Sbjct: 317 VCEAYQRIFSILDLPIVQAVGATGAIGGSFSHEFHLLSEIGEDHVYHCSR---------- 366 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 V Q T + H S P+ +GIEVGH F GTKYS Sbjct: 367 ---------CGYAVNQETVEGVPSCPDH-----PSTPDCNMSLRQGIEVGHAFLLGTKYS 412 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN-- 353 A F DGK +MG YG+G R++AA IE K I WP +AP+++ +++ Sbjct: 413 KTFKADFYDKDGKPRLAEMGCYGLGVTRILAAAIEVLSSEKEIRWPQIIAPYQVCIVSPK 472 Query: 354 --------IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQV 404 I + + +D C + + D+ DD G IG + A +G+PL V Sbjct: 473 EGGAERSAIHLAEWLYQDVCLHV----PHLAADLLLDDRGHMTIGRRVKDAAHVGYPLIV 528 Query: 405 IVGSKFV-SDSKVEIKHRLTGIREDMS 430 +VG + + +D K E+ + +G E +S Sbjct: 529 VVGKRALEADPKFEVINTASGSTEYLS 555 >gi|94498868|ref|ZP_01305406.1| prolyl-tRNA synthetase [Oceanobacter sp. RED65] gi|94428500|gb|EAT13472.1| prolyl-tRNA synthetase [Oceanobacter sp. RED65] Length = 584 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + L+E+P DA + SH+LMLR GMI + + G+Y+WLPLG K L V ++REE Sbjct: 1 MRASQYLVATLKESPSDAVVVSHQLMLRAGMIRKLASGLYTWLPLGLKTLRKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P +Q A+LW ESGR+ YG E+LRL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGAQEVLMPAVQPAELWEESGRWFEYGGELLRLKDRHNRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE RPRFGVMRSREF+MKDAYSF + + + +Y++M + Sbjct: 121 ELNSYKQLPSNFYQIQTKFRDETRPRFGVMRSREFIMKDAYSFHIDGDSLQQTYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL P+ A++G IGG +SHEF VLA +GE + S Sbjct: 181 YTNIFTRLGLDFRPVAADTGSIGGAVSHEFHVLAQSGEDDIAFS 224 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/147 (45%), Positives = 95/147 (64%), Gaps = 7/147 (4%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + A +GK+ + MG YGIG RVVAA IE +HD +GII Sbjct: 414 RGIEVGHIFQLGTKYSEALGAKVLDENGKEKTMMMGCYGIGVSRVVAAAIEQNHDDRGII 473 Query: 340 WPDSVAPFKISLINIKAHDQVCRDAC---EKIYARLSKVGCDVFWDDMGEQI--GSQFAV 394 WP+++APF++S++ I A Q D E++Y L+ +G DVF DD ++ G +FA Sbjct: 474 WPEAIAPFQVSIVQIDA--QKSEDVVKYSEELYESLTALGVDVFLDDRDKKTSPGVKFAD 531 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++L+G P +V++ S+ + K E KHR Sbjct: 532 SELMGIPHRVVLSSRGLKAGKAEYKHR 558 >gi|241760072|ref|ZP_04758170.1| proline--tRNA ligase [Neisseria flavescens SK114] gi|241319526|gb|EER55956.1| proline--tRNA ligase [Neisseria flavescens SK114] Length = 595 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 179/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V I+REE Sbjct: 26 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENIVREE 85 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 86 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 145 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 146 EVNSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQNMYDA 205 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGLK P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 206 YCRIFTRLGLKFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 261 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 262 PTLPLKG---ERAAAQAELTKVHTPNVKTIESLVE 293 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 429 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 488 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++APF++ ++ N K + V R+A +KIYA L G DV DD E+ G ++ Sbjct: 489 VWTKAMAPFEVVIVPMNYKKSEAV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 547 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ EV+ Sbjct: 548 LLGIPHRIVIGDRALKEGNVEYAERRDNQAQAVAVSEVV 586 >gi|269123109|ref|YP_003305686.1| prolyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] gi|268314435|gb|ACZ00809.1| prolyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] Length = 574 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 158/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+ +E P++AE SH+LMLR MI Q ++G+Y++LPLG K L + I+REE Sbjct: 1 MRFSKSFIKTYKEVPKEAETISHQLMLRASMIKQLTRGVYTYLPLGLKVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ A E+ +P LQ ADLW ESGR+ SYG E++RL DRN++ + GPTHEEV+ D+FR+ Sbjct: 61 LNKINAQEILMPVLQPADLWQESGRWFSYGAELMRLHDRNNRDFVLGPTHEEVIVDLFRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP YQIQ KFRDE RPRFG+MR REF+MKDAYSF LT E YNK+ + Sbjct: 121 IVTSYKDLPLNVYQIQTKFRDERRPRFGLMRGREFIMKDAYSFHLTQECLDREYNKVKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF R GL + A++G IGG SHEF+VLA +GE + S Sbjct: 181 YCKIFERCGLNFRAVDADTGSIGGSESHEFMVLASSGEDDILYS 224 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 75/168 (44%), Positives = 99/168 (58%), Gaps = 2/168 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGHIF G KYS M+ G V MG YGIG RV AA IE + D GI Sbjct: 409 ARGIEVGHIFKLGKKYSAAMNTKVLNDKGVAETVIMGCYGIGVSRVAAAAIEQNFDDFGI 468 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP S+AP+ + LI + D++ ++ EKIY+ + DV +DD E+ G +F ADL+ Sbjct: 469 IWPKSIAPYLVDLILVNVKDEIAKEVSEKIYSDMLLNNIDVIYDDRDEKAGFKFKDADLI 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 G PL+VIVG V + VEIKHR ++ +E+VI+Y F N+ Sbjct: 529 GIPLKVIVGKGAV-NGMVEIKHRDGSFSGEIKVEDVISYIKE-FEKNK 574 >gi|218768358|ref|YP_002342870.1| prolyl-tRNA synthetase [Neisseria meningitidis Z2491] gi|81857470|sp|Q9JU09|SYP_NEIMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|121052366|emb|CAM08698.1| prolyl-tRNA synthetase [Neisseria meningitidis Z2491] Length = 570 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 180/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANVELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + TA A VH N K +SL E Sbjct: 237 PTLPLKG---ERTAAQAELVKVHTPNVKTIESLVE 268 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 96/159 (60%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++A F++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMASFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRDNEAQAIAIGEIV 561 >gi|325132465|gb|EGC55158.1| prolyl-tRNA synthetase [Neisseria meningitidis M6190] Length = 599 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 180/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 265 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + TA A + VH N K +SL E Sbjct: 266 PTLPLKG---ERTAAQAELTKVHTPNVKTIESLVE 297 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 433 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 492 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 493 IWTKAMAPFEVVIVPMNYKKSDAV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 551 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 552 LLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 590 >gi|225023763|ref|ZP_03712955.1| hypothetical protein EIKCOROL_00627 [Eikenella corrodens ATCC 23834] gi|224943457|gb|EEG24666.1| hypothetical protein EIKCOROL_00627 [Eikenella corrodens ATCC 23834] Length = 570 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 132/277 (47%), Positives = 179/277 (64%), Gaps = 15/277 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLMLR G+I ++ G+Y+W+P+G + L V A++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMLRAGLIKANASGLYTWMPMGLRVLRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q ADLW ESGR+D YG E+LR+ DR+D + PT EE++TDI R Sbjct: 61 MNRAGAIELLMPVIQPADLWKESGRWDFYGDELLRITDRHDNTFCFSPTCEELITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEG-SKHSYNKMFV 179 I SY+ LP FY IQ KFRDE RPRFGVMR+REF+MKDAYSF E + Y M+ Sbjct: 121 EITSYKQLPKNFYHIQTKFRDERRPRFGVMRAREFVMKDAYSFHADYESLVREGYQPMYN 180 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +Y R+F RLGL P+ A++G IGG SHEF VLA++GE + S + +DF Sbjct: 181 AYCRVFDRLGLDYRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSSE----------SDF 230 Query: 240 DDIISLNSIVEQ--WTAP-YAATSDVHNEKLFDSLPE 273 I L + Q AP AA + VH + ++PE Sbjct: 231 AANIELAPTLRQSGERAPAQAALAKVHTPGV-KTIPE 266 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 80/224 (35%), Positives = 122/224 (54%), Gaps = 15/224 (6%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQWT-------APYAATSDVHNEKLFDSLPEN 274 F K + DF + D +I N +T +P +D+ N D P+ Sbjct: 342 FKGKVYADFAVEKLA---DTVIGANEDDHHYTGFNFGRDSPEPEFADIRNVIAGDPSPDG 398 Query: 275 KRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 K ARGIEVGH+F KYS ++A+F +GK ++MG YGIG R+VAA IE + Sbjct: 399 KGYLKLARGIEVGHVFQLRDKYSAALNASFLDNNGKSQIMEMGCYGIGITRIVAAAIEQN 458 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +D +GIIW +++APF+ ++ N K + V R+A +KIYA L+ G DV DD E+ G Sbjct: 459 NDERGIIWTNAMAPFQAVIVPMNYKKSEAV-REAADKIYAELTAAGVDVLLDDRDERAGV 517 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 A ++LLG P ++ +G + + + KVE R +G E ++ E+ Sbjct: 518 LLADSELLGIPHRIAIGDRGLKEGKVEYTERRSGETELVAAGEI 561 >gi|313497556|gb|ADR58922.1| ProS [Pseudomonas putida BIRD-1] Length = 571 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 132/302 (43%), Positives = 184/302 (60%), Gaps = 24/302 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHQRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGL P++A++G IGG SHEF VLA++GE V I S+++D+ Sbjct: 181 YTNVFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDV----------IFSDSSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATS-----DVHNEKLFDSLPEN---------KRVSARGIEVGH 286 I + + T A T D N K L EN K + RG E G Sbjct: 231 ANIEKAEAIPRETVRPAPTEELRLVDTPNAKTIAQLVENHGLPIEKTVKTLIVRGAEEGK 290 Query: 287 IF 288 + Sbjct: 291 LI 292 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/191 (39%), Positives = 112/191 (58%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + V RGIEVGHIF GTKYS + G +GK + Sbjct: 378 PVPQVADLRNVVEGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEALKCQVLGENGKPVVL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ V R+A +K+YA L Sbjct: 438 SMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETDVVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E KHR + + Sbjct: 498 TAAGYEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKHRTEQDAQALP 557 Query: 431 LEEVINYASHR 441 L EV+ + R Sbjct: 558 LNEVLTFLQAR 568 >gi|325205891|gb|ADZ01344.1| prolyl-tRNA synthetase [Neisseria meningitidis M04-240196] Length = 570 Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 179/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANVELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + TA A VH N K +SL E Sbjct: 237 PTLPLKG---ERTAAQAELVKVHTPNVKTIESLVE 268 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQVMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 561 >gi|325136158|gb|EGC58766.1| prolyl-tRNA synthetase [Neisseria meningitidis M0579] Length = 599 Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 180/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 265 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + TA A + VH N K +SL E Sbjct: 266 PTLPLKG---ERTAAQAELTKVHTPNVKTIESLVE 297 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 433 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 492 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 493 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 551 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 552 LLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 590 >gi|187479380|ref|YP_787405.1| prolyl-tRNA synthetase [Bordetella avium 197N] gi|114152173|sp|Q2KVA0|SYP_BORA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|115423967|emb|CAJ50520.1| prolyl-tRNA synthetase [Bordetella avium 197N] Length = 576 Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 125/226 (55%), Positives = 159/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y + L+E P DAE+ASH+LM R GMI + + GIYS++PLG K + V IIREE Sbjct: 1 MRASNYHINTLKEAPADAEVASHQLMTRAGMIRKLAGGIYSYMPLGLKVIRKVEHIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GAIE+ +P +Q A+LW ESGR++ YG+E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNASGAIELLMPVVQPAELWQESGRWEQYGQELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP F+ IQ KFRDE RPRFGVMR REF MKDAYSFD G+ SY+ MF + Sbjct: 121 EIHSYRQLPVNFFHIQTKFRDERRPRFGVMRGREFTMKDAYSFDRDEAGAGRSYDIMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL + A++G IGG SHEF V+ADTGE + + D Sbjct: 181 YHRIFRRLGLAFRAVAADTGSIGGSRSHEFQVIADTGEDLLVFNPD 226 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 71/185 (38%), Positives = 106/185 (57%), Gaps = 7/185 (3%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K A RGIEVGH+F+ GTKYS + ATF GK +QMG Sbjct: 387 VTDLRNVVAGDPSPDGKGTLAIQRGIEVGHVFFLGTKYSEALKATFLDETGKPALMQMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE + D +GIIWP ++APF++ + + + R+ E +Y L + Sbjct: 447 YGIGVTRIVGAAIEQNFDNRGIIWPRAIAPFEVVICPVGWGKSETVRNKSEALYQALREQ 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR----LTGIREDMSL 431 G DV DD + G FA +L+G PL+V +G + ++D +E++ R I D +L Sbjct: 507 GIDVILDDRDARPGVMFAEWELIGVPLRVTIGDRGLNDGVIELQGRRDTETVKISVDSAL 566 Query: 432 EEVIN 436 +E++N Sbjct: 567 KEILN 571 >gi|304387349|ref|ZP_07369541.1| proline--tRNA ligase [Neisseria meningitidis ATCC 13091] gi|304338600|gb|EFM04718.1| proline--tRNA ligase [Neisseria meningitidis ATCC 13091] Length = 599 Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 180/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 210 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANVELA 265 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + TA A VH N K +SL E Sbjct: 266 PTLPLKG---ERTAAQAELVKVHTPNVKTIESLVE 297 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 433 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 492 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 493 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 551 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 552 LLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 590 >gi|114331243|ref|YP_747465.1| prolyl-tRNA synthetase [Nitrosomonas eutropha C91] gi|123026746|sp|Q0AGN2|SYP_NITEC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114308257|gb|ABI59500.1| prolyl-tRNA synthetase [Nitrosomonas eutropha C91] Length = 568 Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 160/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL L+E P +AE+ASH+LMLR G+I + G+Y+W+PLG + L + IIREE Sbjct: 1 MRVSQFFLSTLKEAPAEAELASHRLMLRAGLIKRLGSGLYTWMPLGLRILHKIEHIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GA+E+ +P + A+LW ESGR+D +G +ML++ DR+ +GPTHEEV+ DI R Sbjct: 61 MNSSGALELLMPAVHPAELWQESGRWDVFGPQMLKIQDRHQHDFCFGPTHEEVIVDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M + Sbjct: 121 EIKSYRQLPINFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHADLGSLEQTYQLMHET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF R+GLK + A++G IGG SHEF VLAD+GE + FC Sbjct: 181 YSRIFTRIGLKFRAVAADTGAIGGSGSHEFHVLADSGEDAIAFC 224 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/178 (40%), Positives = 103/178 (57%), Gaps = 3/178 (1%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K + RGIEVGHIF TKYS M AT+ G+ ++MG YG Sbjct: 382 DIRNVVTGDPSPDGKGMLEICRGIEVGHIFQLRTKYSEKMKATYLDESGQTQILEMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA-CEKIYARLSKVGC 377 IG R+VAA IE + D +GII+P ++APF++S+I I H + A EK+Y G Sbjct: 442 IGVSRIVAAAIEQNCDERGIIFPVAIAPFQLSIIPIGYHKNLQIQAEVEKLYRACRAAGI 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +V DD E+ G FA +L+G P ++++G + + D VE + RL +SL+EVI Sbjct: 502 EVLLDDREERPGVMFADQELIGIPHRIVIGERNLRDGMVEYQGRLDKTSRLLSLQEVI 559 >gi|301155393|emb|CBW14859.1| prolyl-tRNA synthetase [Haemophilus parainfluenzae T3T1] Length = 571 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 117/226 (51%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P +A I SH+LMLR GMI + G+Y+W+P G + L V IIREE Sbjct: 1 MRTSQYLFSTLKETPAEAAIVSHQLMLRAGMIRPLASGLYNWMPTGWRVLRKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA+E+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MDKSGALEIKMPVVQPAELWEESGRWEQYGPELLRFEDRGNRHFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + +Y+ M+ + Sbjct: 121 EVSSYRQLPINLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHADHASLQQTYDVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+RLGL ++A++G IGG SHEF VLA++GE V S + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIFSTE 226 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 70/183 (38%), Positives = 113/183 (61%), Gaps = 4/183 (2%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF G KYS M+AT +G DG+ V MG Sbjct: 382 VADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGKKYSEAMNATVQGEDGRPMVVTMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG RVVAA IE D +GI+WP D +APF ++++ + H + ++ E++Y L Sbjct: 442 YGIGVTRVVAAAIEQHFDERGIVWPTDEIAPFTVAVVPMNMHKSESVQEYAEELYRTLQA 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ ++ +++ Sbjct: 502 QGVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQL 561 Query: 435 INY 437 +++ Sbjct: 562 LDF 564 >gi|325142550|gb|EGC64950.1| prolyl-tRNA synthetase [Neisseria meningitidis 961-5945] gi|325198486|gb|ADY93942.1| prolyl-tRNA synthetase [Neisseria meningitidis G2136] Length = 570 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 179/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ S Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 237 PTLPLKG---ERAAAQAVLTKVHTPNVKTIESLVE 268 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 561 >gi|319410604|emb|CBY90973.1| prolyl-tRNA synthetase [Neisseria meningitidis WUE 2594] Length = 599 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 180/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 210 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANVELA 265 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + TA A VH N K +SL E Sbjct: 266 PTLPLKG---ERTAAQAELVKVHTPNVKTIESLVE 297 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 96/159 (60%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 433 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 492 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++A F++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 493 IWTKAMASFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 551 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 552 LLGIPHRIVIGDRALKEGNVEYAERRDNEAQAIAIGEIV 590 >gi|325295715|ref|YP_004282229.1| Prolyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066163|gb|ADY74170.1| Prolyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 576 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 116/226 (51%), Positives = 163/226 (72%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+P ++E+P DAEI SHKL++R G I + + G+Y LPLG K L + +IREE Sbjct: 1 MRFSRAFIPTMKESPADAEIPSHKLLIRAGFIRKKASGLYDILPLGVKVLLKIEKVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P + A+LW+ESGR+D YGKEM++ DR+D+ GPT EE++TD+ R Sbjct: 61 MNKAGAQEVILPIMHPAELWIESGRWDVYGKEMIKFKDRHDRDYALGPTAEEMITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQI KFRDE+RPRFG+MR+REF+MKDAYSF + E ++ Y M+ + Sbjct: 121 EVKSYKDLPLNLYQIGRKFRDEIRPRFGLMRAREFIMKDAYSFHASNEDAEREYWNMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y RIF ++GL + A++G IGG SHEF+V+ADTGE + V+C K Sbjct: 181 YSRIFRKMGLVFKAVEADTGEIGGKFSHEFMVIADTGEGKLVYCEK 226 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 73/159 (45%), Positives = 99/159 (62%), Gaps = 1/159 (0%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + RGIEVGHIF GTKYS M+ATF DGK+ + MG YGIG RV+AA +E ++D Sbjct: 401 IEKRGIEVGHIFKLGTKYSQAMNATFVDEDGKEKPMVMGCYGIGVTRVMAAAVEQNYDEN 460 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 GIIWP +APF++ +I + + + E IY L K G DV DD + G +F AD Sbjct: 461 GIIWPVEIAPFEVIVIPVNVKKEEIIETAENIYDELQKNGFDVAIDDRNARPGFKFKDAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G P Q+IVG K + VEIK R TG R ++++ +V+ Sbjct: 521 LIGIPYQIIVGKK-AGEGVVEIKVRKTGERFEIAVNKVV 558 >gi|88705599|ref|ZP_01103309.1| prolyl-tRNA synthetase [Congregibacter litoralis KT71] gi|88700112|gb|EAQ97221.1| prolyl-tRNA synthetase [Congregibacter litoralis KT71] Length = 571 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 117/221 (52%), Positives = 158/221 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ + +E P DAEI SH+LMLR G+I + S G+Y+W+P+G + L V ++REE Sbjct: 1 MRSSEFLITTHKETPADAEIISHRLMLRAGLIRKLSSGLYTWMPMGLRVLRKVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +GA+E+++P +Q A+LW ESGR++ YG E+LR+ DR+ + GPTHEEV+TDI R+ Sbjct: 61 MDASGALELAMPMVQPAELWEESGRWEQYGPELLRIQDRHQRDFCLGPTHEEVITDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K RDE+RPRFGVMR+REFLMKDAYSF + +Y M + Sbjct: 121 EISSYKQLPLNLYQIQNKVRDEIRPRFGVMRAREFLMKDAYSFHADATSLEATYGVMHGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF RLGL P+ A+SG IGG+ SHEF VLAD+GE + Sbjct: 181 YTRIFERLGLDFRPVMADSGSIGGNTSHEFHVLADSGEDAI 221 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 112/190 (58%), Gaps = 3/190 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 ++D+ N D P+ K RGIEVGHIF GTKYS M+A G++ + MG Sbjct: 381 SADLRNVVAGDPSPDGKGQLQIRRGIEVGHIFQLGTKYSEAMNARVLDETGRNVTLSMGC 440 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC-RDACEKIYARLSKV 375 YGIG R+VAA IE +HD +GIIWP ++APF+++++ + H +A E ++ + Sbjct: 441 YGIGVSRIVAAAIEQNHDDRGIIWPSAMAPFQLAIVPLNMHKSAAVAEAAETLHQECLAL 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +FA +LLG P ++++G + +++ ++E + R + ++L E + Sbjct: 501 GIEVLMDDRNERPGVKFADMELLGIPHRIVIGDRSLAEGEIEYQGRRDADSQRVALTEAM 560 Query: 436 NYASHRFSNN 445 ++ + + ++ Sbjct: 561 SFITAQLTSG 570 >gi|325274563|ref|ZP_08140621.1| prolyl-tRNA synthetase [Pseudomonas sp. TJI-51] gi|324100290|gb|EGB98078.1| prolyl-tRNA synthetase [Pseudomonas sp. TJI-51] Length = 571 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 133/301 (44%), Positives = 184/301 (61%), Gaps = 24/301 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHQRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNMYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL P++A++G IGG SHEF VLA++GE V I S+++D+ Sbjct: 181 YSNIFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDV----------IFSDSSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATS-----DVHNEKLFDSLPEN---------KRVSARGIEVGH 286 I + + T A T D N K L EN K + RG E G Sbjct: 231 ANIEKAEAIPRETVRPAPTEELRLVDTPNAKTIAQLVENFGLPIEKTVKTLIVRGAEEGK 290 Query: 287 I 287 + Sbjct: 291 L 291 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 73/191 (38%), Positives = 112/191 (58%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + + RGIEVGHIF GTKYS + G +GK + Sbjct: 378 PVPQVADLRNVVEGDPSPDGQGTLIIKRGIEVGHIFQLGTKYSEALKCQVLGENGKPVVL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ + R+A +K+YA L Sbjct: 438 SMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETEAVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E KHR + + Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKHRTEQDAQPLP 557 Query: 431 LEEVINYASHR 441 L EV+ + R Sbjct: 558 LNEVLTFLQAR 568 >gi|295106076|emb|CBL03619.1| prolyl-tRNA synthetase, family II [Gordonibacter pamelaeae 7-10-1-b] Length = 585 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 124/283 (43%), Positives = 185/283 (65%), Gaps = 10/283 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E+P DAEIASHKL+LR GMI + + G+Y++LPLG++ L V I+REE Sbjct: 7 MRMSELCVPTLKEDPTDAEIASHKLLLRAGMIRKTASGVYTFLPLGKRVLAKVERIVREE 66 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E+ +P LQ +LW ESGR++ YG E++RL DR+D+ GPTHEE++T + R+ Sbjct: 67 MDAIGSQEIMMPALQPGELWHESGRWNDYGPELMRLVDRHDREFCLGPTHEELITALVRN 126 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP T YQIQ+KFRDE+RPRFG++RSREF+MKDAYSF + E + +Y+ M + Sbjct: 127 ELRSYKELPLTLYQIQVKFRDEIRPRFGLLRSREFIMKDAYSFHASQESLQKTYDDMSAA 186 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDF 239 Y RI R+ + P+ A+SG IGG ++ EF+ LA+ GE + V C+ + + N + Sbjct: 187 YGRICERMDMDYRPVEADSGQIGGSVTCEFMALAEAGEAELVHCACGW------AANAEA 240 Query: 240 DDIISLNSIVEQWTAPYAATSDVHN---EKLFDSLPENKRVSA 279 D ++ ++ + AT VH F +PE+ V A Sbjct: 241 GDCLARPTVYDVPAMEKVATPGVHTIAELAAFLDIPESSTVKA 283 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 73/169 (43%), Positives = 103/169 (60%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 ARGIEV +F G KYS M ATF DG + MG YG+G R +AA++E +D G Sbjct: 403 GARGIEVSQVFQLGDKYSKAMGATFMAEDGSEQPFLMGCYGVGVSRTMAAIVEQHNDENG 462 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I WP SVAP + ++ + D + A EK+ L+K+G +V DD E+ G +FA ADL Sbjct: 463 IAWPFSVAPAHVCVLPLTVGDDEVQPAAEKLAGDLAKLGLEVVIDDRKERAGVKFADADL 522 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +G+PLQV+VG + +++ KVEIKHR TG R D+SL + + + N + Sbjct: 523 VGWPLQVVVGKRGLAEGKVEIKHRKTGARRDISLMALTDAVAFAQRNTK 571 >gi|148546477|ref|YP_001266579.1| prolyl-tRNA synthetase [Pseudomonas putida F1] gi|166980143|sp|A5VZT5|SYP_PSEP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148510535|gb|ABQ77395.1| prolyl-tRNA synthetase [Pseudomonas putida F1] Length = 571 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 132/302 (43%), Positives = 184/302 (60%), Gaps = 24/302 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHQRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGL P++A++G IGG SHEF VLA++GE V I S+++D+ Sbjct: 181 YSNVFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDV----------IFSDSSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATS-----DVHNEKLFDSLPEN---------KRVSARGIEVGH 286 I + + T A T D N K L EN K + RG E G Sbjct: 231 ANIEKAEAIPRETVRPAPTEELRLVDTPNAKTIAQLVENHGLPIEKTVKTLIVRGAEEGK 290 Query: 287 IF 288 + Sbjct: 291 LI 292 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 75/191 (39%), Positives = 113/191 (59%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + V RGIEVGHIF GTKYS + G +GK + Sbjct: 378 PVPQVADLRNVVEGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEALKCQVLGENGKPVVL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ +V R+A +K+YA L Sbjct: 438 SMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETEVVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E KHR + + Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKHRTEQDAQALP 557 Query: 431 LEEVINYASHR 441 L EV+ + R Sbjct: 558 LNEVLTFLQAR 568 >gi|288553027|ref|YP_003424962.1| prolyl-tRNA synthetase [Bacillus pseudofirmus OF4] gi|288544187|gb|ADC48070.1| prolyl-tRNA synthetase [Bacillus pseudofirmus OF4] Length = 572 Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 118/226 (52%), Positives = 157/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+ LP L++ P DA+I SH+LMLR GMI Q + G+YS+LPL ++ L V +I+REE Sbjct: 1 MRQRSLLLPTLRDVPADADIISHQLMLRAGMIRQIAAGVYSYLPLAKRVLHKVESIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+++PT+ A+LW E+GR+D G E++RL DR+D+ GPTHEEV+T I R Sbjct: 61 MDAAGAQELTMPTMHPAELWQETGRWDKMGGELMRLKDRHDRDFALGPTHEEVITSILRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF TPE +Y +M+ + Sbjct: 121 SISSYKKLPVNLYQIQTKFRDERRPRFGLLRGREFMMKDAYSFHATPESLDEAYKEMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL P+ A+SG IGG +HEF+ LAD GE + S + Sbjct: 181 YSRIFSRAGLTFRPVIADSGAIGGKDTHEFMALADVGEDTIAYSDE 226 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/146 (43%), Positives = 91/146 (62%), Gaps = 1/146 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG +F GT YS M+AT +GK + MG YG+G R VAA+IE HD GI Sbjct: 402 AQGIEVGQVFKLGTVYSEAMNATILDENGKTQPMIMGCYGVGVSRTVAAIIEQHHDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SVAP+ + L+ + + + + E++Y L K G DV +DD E+ G +F +DL+ Sbjct: 462 VWPPSVAPYDVHLLTLNSKNAEQSELSEELYQSLKKTGFDVLYDDRPERAGVKFKDSDLI 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G PL+V VG K ++ VE+K R +G Sbjct: 522 GIPLRVSVG-KRAAEGIVEVKIRKSG 546 >gi|261392382|emb|CAX49924.1| prolyl-tRNA synthetase (proline--tRNA ligase; ProRS; global RNA synthesis factor) [Neisseria meningitidis 8013] Length = 570 Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 179/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANVELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + TA A VH N K +SL E Sbjct: 237 PTLPLKG---ERTAAQAELVKVHTPNVKTIESLVE 268 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 98/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + +S VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKESNVEYAERRNNEAQAVAIGEIV 561 >gi|161870212|ref|YP_001599382.1| prolyl-tRNA synthetase [Neisseria meningitidis 053442] gi|161595765|gb|ABX73425.1| prolyl-tRNA synthetase [Neisseria meningitidis 053442] Length = 599 Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 179/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ S Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDS 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 265 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 266 PTLPLKG---ERAAAQAVLTKVHTPNVKTIESLVE 297 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 433 ARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 492 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 493 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 551 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 552 LLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 590 >gi|126306083|ref|XP_001381501.1| PREDICTED: similar to Prolyl-tRNA synthetase (mitochondrial)(putative) [Monodelphis domestica] Length = 475 Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 148/408 (36%), Positives = 220/408 (53%), Gaps = 36/408 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L+ + S +LML+TG+IH G Y +LP +A++ + +I +E G ++ Sbjct: 59 LESKSAEVTCKSQRLMLQTGLIHPAGPGCYHYLPYTVRAMEKLVKVIDQEMQAIGGQKLD 118 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH-IKSYRNLP 129 +PTL SA+LW + R++ GKE+ RL DR++K GPTHEEV+T + S SY+ LP Sbjct: 119 MPTLSSAELWRVTDRWNLMGKELFRLQDRHNKDYCLGPTHEEVITSLMASQKTLSYKQLP 178 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + YQI KFRDE RPRFG++R REF MKD Y+FD + E + +Y+ + +Y R+F+RLG Sbjct: 179 YLLYQITRKFRDEPRPRFGLLRGREFYMKDMYTFDCSSEAAHQTYDLVCEAYGRVFNRLG 238 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 L+ + ++A G IGG +SHEF + + GE CS +F E D Sbjct: 239 LQFVRVQAAVGSIGGTMSHEFQLPLNIGEDVLAVCSN--CNFAANVETLD---------- 286 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 P T V KL ++ +G+EVGH FY GTKYS +A F A GK Sbjct: 287 ------PRDPTCPVCQGKLTET---------KGVEVGHTFYLGTKYSSVFNAEFINAQGK 331 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD------QVCR 362 ++MG YG+G R++AA IE + I WP +AP+++ LI K ++ Sbjct: 332 PSLLEMGCYGLGVTRILAAAIEMLSMEECIRWPSLLAPYQVCLIPPKKGSKEEMGIELMG 391 Query: 363 DACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSK 409 + I L ++ +V DD + IG++ A+ LG+P VI G + Sbjct: 392 TLYDDITEALPQLKGEVLLDDRIHLTIGNRLKDANKLGYPFVVIAGKR 439 >gi|26987940|ref|NP_743365.1| prolyl-tRNA synthetase [Pseudomonas putida KT2440] gi|81840777|sp|Q88NK2|SYP_PSEPK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|24982651|gb|AAN66829.1|AE016311_9 prolyl-tRNA synthetase [Pseudomonas putida KT2440] Length = 571 Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 132/302 (43%), Positives = 184/302 (60%), Gaps = 24/302 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHQRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGL P++A++G IGG SHEF VLA++GE V I S+++D+ Sbjct: 181 YSNVFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDV----------IFSDSSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATS-----DVHNEKLFDSLPEN---------KRVSARGIEVGH 286 I + + T A T D N K L EN K + RG E G Sbjct: 231 ANIEKAEAIPRETVRPAPTEELRLVDTPNAKTIAQLVENHGLPIEKTVKTLIVRGAEEGK 290 Query: 287 IF 288 + Sbjct: 291 LI 292 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/191 (39%), Positives = 112/191 (58%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + V RGIEVGHIF GTKYS + G +GK + Sbjct: 378 PVPQVADLRNVVEGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEALKCQVLGENGKPVVL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ V R+A +K+YA L Sbjct: 438 SMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETDVVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E KHR + + Sbjct: 498 TAAGYEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKHRTEQDAQALP 557 Query: 431 LEEVINYASHR 441 L EV+ + R Sbjct: 558 LNEVLTFLQAR 568 >gi|325577191|ref|ZP_08147675.1| proline--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] gi|325160773|gb|EGC72894.1| proline--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] Length = 571 Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 117/226 (51%), Positives = 157/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P +A I SH+LMLR GMI + G+Y+W+P G + L V IIREE Sbjct: 1 MRTSQYLFSTLKETPAEAAIVSHQLMLRAGMIRPLASGLYNWMPTGWRVLRKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA+E+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MDKSGALEIKMPVVQPAELWEESGRWEQYGPELLRFEDRGNRHFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + +Y M+ + Sbjct: 121 EVSSYRQLPINLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHADHSSLQQTYEVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+RLGL ++A++G IGG SHEF VLA++GE V S + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIFSTE 226 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 113/183 (61%), Gaps = 4/183 (2%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF G KYS M+AT +G DG+ V MG Sbjct: 382 VADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGKKYSEAMNATVQGEDGRPMVVTMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG RVVAA IE D +GI+WP D +APF ++++ + H + ++ E++Y L Sbjct: 442 YGIGVTRVVAAAIEQHFDERGIVWPTDEIAPFTVAVLPMNMHKSESVQEYAEELYCTLQA 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD E+ G FA +L+G P V++G K +++ ++E K+R TG ++ ++ E++ Sbjct: 502 QGVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKEQL 561 Query: 435 INY 437 +++ Sbjct: 562 LDF 564 >gi|311694949|gb|ADP97822.1| prolyl-tRNA synthetase [marine bacterium HP15] Length = 577 Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + +E P DAEI SH+LMLR GMI + + G+Y+WLP+G + L V I+REE Sbjct: 1 MRASRYLIATQKETPADAEIISHQLMLRAGMIRKLAAGLYTWLPMGLRTLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ +P +Q A+LW ESGR+ YG E+LR+ DR+ + +GPTHEEV+TD+ R+ Sbjct: 61 MDKSGAQEVLMPAVQPAELWEESGRWTQYGGELLRMKDRHGRDFCFGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQ+Q KFRDE RPRFGVMR+REFLMKDAYSF L E +Y M + Sbjct: 121 EISSYKELPANFYQVQTKFRDERRPRFGVMRAREFLMKDAYSFHLNAESLNETYELMHRT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL ++A+SG IGG SHEF VLA +GE + S Sbjct: 181 YCAIFDRFGLDYRAVQADSGAIGGSASHEFHVLASSGEDDIVFS 224 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 66/159 (41%), Positives = 99/159 (62%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M+AT +GK + MG YG+G RVVAA IE +HD GII Sbjct: 409 RGIEVGHIFKLGNKYSTAMNATVLDENGKTVIMDMGCYGLGVSRVVAAAIEQNHDENGII 468 Query: 340 WPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + AH +A EK+Y +L + G DV DD E+ G +FA +L+ Sbjct: 469 WPDAIAPFQVAIVTLNAHKSPTVAEAGEKLYEQLRQAGYDVLLDDRKERPGVKFADMELI 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P + +V + ++ +E K R ++D+ + E + + Sbjct: 529 GIPHRFVVSERGLAAGTLEYKGRKDAEKQDVPVAEALPF 567 >gi|319795456|ref|YP_004157096.1| prolyL-tRNA synthetase [Variovorax paradoxus EPS] gi|315597919|gb|ADU38985.1| prolyl-tRNA synthetase [Variovorax paradoxus EPS] Length = 581 Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 161/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ASH+LM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MKASRFFVSTLKEAPADAEVASHRLMMRAGMIKKLGTGIYTYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+++P +Q A+ W E+GR++ G E+LR+ DR+D+ + PT EEV+TDI R Sbjct: 61 MNRAGAIELTMPVVQPAEFWQETGRFEKMGPELLRIKDRHDRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD + +K SY M + Sbjct: 121 EIRSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDLDAAKASYQIMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y IF R GL+ + A+SG IGGDLS EF V+A TGE V+C Sbjct: 181 YRNIFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC 224 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 68/166 (40%), Positives = 101/166 (60%), Gaps = 3/166 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D+ P+ K V A RGIEVGH+F GTKYS M+AT+ GK +++MG Sbjct: 393 VADLRNVVAGDASPDGKGVLAIERGIEVGHVFVLGTKYSKDMNATYLDEGGKPQFLEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + + I + + E +Y L Sbjct: 453 YGIGITRLPAAAIEQNHDERGIIWPDALAPFTVVVCPIGMDRSPEVKVSAEALYEELLAK 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD GE+ G+ FA +L+G P +V++ + + + ++E +HR Sbjct: 513 GVDVLLDDRGERPGAMFADWELIGVPHRVVISDRGLKEGQLEYQHR 558 >gi|298368808|ref|ZP_06980126.1| proline--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] gi|298282811|gb|EFI24298.1| proline--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] Length = 569 Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 179/273 (65%), Gaps = 9/273 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLEFRPVAADTGSIGGTDSHEFQVLAESGE-DVIAYSDTSDY---AANVELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSL 271 + L + A A + VH N K DSL Sbjct: 237 PTLPLKG---ERAAAQAELTKVHTPNVKTIDSL 266 Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 62/145 (42%), Positives = 89/145 (61%), Gaps = 3/145 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIY L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDAV-REAADKIYTELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 LLG P ++++G + + + VE R Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAER 547 >gi|241664234|ref|YP_002982594.1| prolyl-tRNA synthetase [Ralstonia pickettii 12D] gi|240866261|gb|ACS63922.1| prolyl-tRNA synthetase [Ralstonia pickettii 12D] Length = 574 Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 118/226 (52%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + G+Y+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGLYTYMPVGLRVIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q +LW E+GR+D G E+LR DR+++ + PT EEV+TDI R+ Sbjct: 61 MNAAGAVEVLMPVVQPGELWQETGRWDKMGDELLRFKDRHERDFVMQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KM+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAEGLKLSYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + A++G IGG SHEF V+ADTGE + D Sbjct: 181 YTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIIYCPD 226 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 100/170 (58%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D P+ K A RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 382 PEPEVYDLRNVVAGDPSPDGKGTLAVCRGIEVGHVFMLGTRYSEAMNATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + R+ ++++A Sbjct: 442 VMGCYGIGITRILGAAIEQNYDARGIIWPASIAPFQVVICPVGYDRSNAVREEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G+ FA +L+G P +V+VG + + + K+E + R Sbjct: 502 LVAAGIDVMLDDRGERPGAMFADWELIGVPFRVVVGDRGLKEGKLEFQGR 551 >gi|329893675|ref|ZP_08269809.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC3088] gi|328923602|gb|EGG30914.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC3088] Length = 571 Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 127/264 (48%), Positives = 175/264 (66%), Gaps = 7/264 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + L+E P DAE+ SH+LMLR GMI + + G+Y+W+PLG K L V I+REE Sbjct: 1 MRTSQTLISTLKETPADAEVISHRLMLRAGMIKKLASGLYTWMPLGLKVLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE+ +P +Q A+LW ESGR+ YG E+LR+ DR+ + GPTHEEV+TDI R+ Sbjct: 61 MDAAGAIELLMPVVQPAELWQESGRWAQYGPELLRMHDRHTREFCLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMR+REF MKDAYSF + + +Y M + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFTMKDAYSFHIDQASLEETYWVMHRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGL P+ A++G IGG SHEF VLAD+GE + S + DF + N + Sbjct: 181 YSNVFDRLGLMYRPVEADTGSIGGSHSHEFHVLADSGEDDIAFSNE-SDF---AANVELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHN 264 + ++ N +E+ AP +++H Sbjct: 237 EAVAPN--IER-PAPSQPMTELHT 257 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 106/159 (66%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M+A A+GK + MG YGIG R+VAA IE +HD KGII Sbjct: 405 RGIEVGHIFQLGQKYSEAMNAQVLDANGKAQTLSMGCYGIGISRIVAAAIEQNHDDKGII 464 Query: 340 WPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WPD++AP++++++ N++ + V + A E +YA+L+ G +V DD E+ G +FA +L Sbjct: 465 WPDAMAPYQVAIVPLNMQKSEAVAQ-AAETLYAQLTDAGIEVLLDDRNERPGIKFADMEL 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +G P ++++G + +++ ++E KHR E++++ + + Sbjct: 524 IGIPHRIVIGDRSLAEGQLEYKHRAAPDSENIAVTDTLT 562 >gi|288575624|ref|ZP_05977335.2| proline--tRNA ligase [Neisseria mucosa ATCC 25996] gi|288567367|gb|EFC88927.1| proline--tRNA ligase [Neisseria mucosa ATCC 25996] Length = 581 Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 179/273 (65%), Gaps = 9/273 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 12 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 71 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 72 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 131 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 132 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 191 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 192 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 247 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSL 271 + L + A A + VH N K DSL Sbjct: 248 PTLPLKG---ERAAAQAELTKVHTPNVKTIDSL 277 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 95/158 (60%), Gaps = 3/158 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 415 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 474 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 475 IWTKAMAPFEVVIVPMNYKKSDAV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 533 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 LLG P ++++G + + + VE R + + L E+ Sbjct: 534 LLGIPHRIVIGDRALKEGNVEYAERRDNQAQTVGLNEI 571 >gi|71279026|ref|YP_269920.1| prolyl-tRNA synthetase [Colwellia psychrerythraea 34H] gi|114152184|sp|Q47Z50|SYP_COLP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71144766|gb|AAZ25239.1| prolyl-tRNA synthetase [Colwellia psychrerythraea 34H] Length = 569 Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 121/230 (52%), Positives = 157/230 (68%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P +AE+ SH+LMLR G++ + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPANAEVISHQLMLRAGLVRNLASGLYTWLPTGLRVLKKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G E+ +P +Q ADLW ESGR D YG E+LR+ DR+ + + GPTHEEV+T + + Sbjct: 61 MQRAGGNEILMPMVQPADLWQESGRLDDYGPELLRINDRHKRPFVLGPTHEEVVTKLVAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMR REFLMKDAYSF L E + +Y MF + Sbjct: 121 ELSSYKQLPLNVFQIQSKFRDEIRPRFGVMRGREFLMKDAYSFHLEDECLEKTYQIMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y RIF RL L P+ A++G IGG+ SHEF VLAD+GE + S D DF Sbjct: 181 YCRIFERLELNFRPVLADTGSIGGEKSHEFHVLADSGEDDIAFS-DASDF 229 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 101/158 (63%), Gaps = 1/158 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KY+ M+ GK+ + MG YGIG R+VAA IE +HD GI Sbjct: 409 RGIEVGHIFQLGRKYAEAMNCAVLNEGGKNQTLTMGCYGIGVSRIVAAAIEQNHDKYGIK 468 Query: 340 WPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF+++++ + A ++ E +Y L++ G +V +DD E+ G FA +L+ Sbjct: 469 WPKAIAPFQVAIVPMNMAKSARVKETAEALYESLNQAGIEVLFDDRKERPGVMFADHELM 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G PL +I+G + + ++E+K+R+TG + ++++EV++ Sbjct: 529 GTPLLLIIGERNLDAQQIELKNRITGEKSLIAIDEVMS 566 >gi|325144523|gb|EGC66822.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240013] gi|325208298|gb|ADZ03750.1| prolyl-tRNA synthetase [Neisseria meningitidis NZ-05/33] Length = 599 Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 179/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANVELA 265 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + TA A VH N K +SL E Sbjct: 266 PTLPLKG---ERTAAQAELVKVHTPNVKTIESLVE 297 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 433 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQVMEMGCYGIGITRVVAAAIEQNNDEKGI 492 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 493 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 551 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 552 LLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 590 >gi|187930129|ref|YP_001900616.1| prolyl-tRNA synthetase [Ralstonia pickettii 12J] gi|226701322|sp|B2UCU9|SYP_RALPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|187727019|gb|ACD28184.1| prolyl-tRNA synthetase [Ralstonia pickettii 12J] Length = 574 Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 118/226 (52%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + G+Y+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGLYTYMPVGLRVIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q +LW E+GR+D G E+LR DR+++ + PT EEV+TDI R+ Sbjct: 61 MNAAGAVEVLMPVVQPGELWQETGRWDKMGDELLRFKDRHERDFVMQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KM+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAEGLKVSYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + A++G IGG SHEF V+ADTGE + D Sbjct: 181 YTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIIYCPD 226 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 68/171 (39%), Positives = 104/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D+ P+ K A RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 382 PEPEVYDLRNVVAGDASPDGKGTLAICRGIEVGHVFMLGTRYSEAMNATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + +D+ R+ ++++A Sbjct: 442 VMGCYGIGITRILGAAIEQNYDARGIIWPASIAPFQVVICPV-GYDRSDAVREEADRLHA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G+ FA +L+G P +V+VG + + + K+E + R Sbjct: 501 ELVAAGIDVMLDDRGERPGAMFADWELIGVPFRVVVGDRGLKEGKLEFQGR 551 >gi|320352952|ref|YP_004194291.1| prolyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] gi|320121454|gb|ADW17000.1| prolyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] Length = 570 Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ LP +E P +AE+ SH+L++R G I + + G+Y++LP+G AL V I+R+E Sbjct: 1 MRYSQMLLPTTKETPSEAEVVSHQLLVRGGFIRKLTSGMYTYLPMGFLALQKVTEIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q DLW ESGR+ YG E+LR DR+D+ GPTHEEV+TD+ R Sbjct: 61 MNRAGAQEILMPMVQPGDLWEESGRWKKYGPELLRFRDRHDRDYCLGPTHEEVVTDVARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ SY M + Sbjct: 121 ELQSYRQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDVDDAGASRSYEIMRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y RIF R GL+ + A+SG IGG SHEF+VLA+TGE T V C Sbjct: 181 YHRIFERCGLEFRAVEADSGAIGGSFSHEFMVLAETGEDTLVIC 224 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 79/161 (49%), Positives = 103/161 (63%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVGHIF GTKYS M A F+ +DG++ MG YGIG RVVAA IE +HD KGII+ Sbjct: 404 GIEVGHIFKLGTKYSEAMKANFQDSDGQEKPFVMGCYGIGVSRVVAAAIEQNHDAKGIIF 463 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P +APF++ ++N+ D+ A E +Y +L G DV DD E+ GS+FA ADLLG Sbjct: 464 PVPLAPFQVIVLNLGPKDEGYCTAAEDLYTQLRAQGLDVLLDDRDERPGSKFADADLLGI 523 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 P ++ VG F + KVEI+ R TG + +SLEE Y + R Sbjct: 524 PYRLTVGKTFEKEGKVEIRSRKTGETQVLSLEEATAYLAER 564 >gi|114319700|ref|YP_741383.1| prolyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] gi|122312397|sp|Q0AB94|SYP_ALHEH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114226094|gb|ABI55893.1| prolyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] Length = 568 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 157/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S + L +E P DAEI SH+LMLR GMI + + G+Y+W PLG + L V I+REE Sbjct: 1 MRASLFPLSTSKETPADAEIVSHQLMLRAGMIRKLAAGLYTWTPLGLRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q A+LW ES R+D YG E+LRL DR+++ +GPTHEEV+TD R Sbjct: 61 MDRAGAHELLMPAVQPAELWQESTRWDKYGPELLRLKDRHERDFCFGPTHEEVITDYVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFGVMR+REFLMKDAYSF L + +Y M+ + Sbjct: 121 EVKSYRQLPLNLYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLDDDCLARTYQVMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL + A+SG IGG +SHEF VLA++GE V S + Sbjct: 181 YTRIFERTGLVFRAVAADSGNIGGSVSHEFHVLAESGEDAVAFSDE 226 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 1/166 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGHIF G +YS M AT G V MG YGIG RVVAA IE +HD GI Sbjct: 403 ARGIEVGHIFQLGREYSEKMKATVLNEAGDAQTVTMGCYGIGVSRVVAAAIEQNHDDNGI 462 Query: 339 IWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWP +APF+++L+ I + + + EK+YA L G +VF+DD + G +FA +L Sbjct: 463 IWPAPIAPFQLALVPIGMNRSEAVTEQAEKLYAELQAEGVEVFFDDRDARPGVKFADMEL 522 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +G P ++++G + + + VE + R D+ L E+ + R Sbjct: 523 IGIPHRLVIGDRGLKNGVVEYRGRRDSESTDVPLAELSAFLRERLG 568 >gi|198283898|ref|YP_002220219.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666412|ref|YP_002426532.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226731419|sp|B7J4Y9|SYP_ACIF2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226731420|sp|B5EKH7|SYP_ACIF5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|198248419|gb|ACH84012.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518625|gb|ACK79211.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 570 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 116/221 (52%), Positives = 159/221 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+P L+E P +AE+ SH+L+LR G I + + G+Y+W+PLG + L V ++REE Sbjct: 1 MRASQIFIPTLKETPAEAELVSHQLLLRGGFIRRLASGLYTWMPLGLRVLRKVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ +P +Q A+LW ESGR++ YG E+LRL DR+D+ GPTHEEV++D+ R Sbjct: 61 MDRSGAQELLMPVVQPAELWQESGRWEQYGPELLRLRDRHDREFCLGPTHEEVISDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP FYQIQ KFRDE+RPRFG+MR REF+MKDAYSF + + +Y M+ + Sbjct: 121 EIHSYRQLPVNFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHMDHSSLEITYQAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y R+F RLGL + A++G IGG SHEF VLAD+GE + Sbjct: 181 YQRVFTRLGLSFRAVEADNGAIGGKRSHEFHVLADSGEDAI 221 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 6/184 (3%) Query: 255 PYAATSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P A +D+ N + D+ P E RGIEVGH+F G +YS M T G+D Sbjct: 376 PRPAAADLRNVRAGDACPHCAEGTLSIRRGIEVGHVFQLGERYSESMGITVLDETGRDAT 435 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYA 370 V MG YGIG RVVAA +E D +GIIWP ++APF++ ++ I A A + ++ Sbjct: 436 VTMGCYGIGVSRVVAAAVEQHFDDRGIIWPVALAPFEVGIVAINARKSPDVAAAAQALHD 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 RL G V DD E+ G QFA DL+G P +++V ++ E + R T E++ Sbjct: 496 RLEAEGYSVLLDDRDERPGVQFATMDLVGLPHRIVVSDTVLAQGVWEYRARRT--TENVL 553 Query: 431 LEEV 434 L+E Sbjct: 554 LDET 557 >gi|297584075|ref|YP_003699855.1| prolyl-tRNA synthetase [Bacillus selenitireducens MLS10] gi|297142532|gb|ADH99289.1| prolyl-tRNA synthetase [Bacillus selenitireducens MLS10] Length = 567 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 159/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+ Y P L++ P DA++ SH+LMLR G+I Q + G+YS+LPLG K L V AI+REE Sbjct: 1 MRQRTYLSPTLRDIPSDADVVSHQLMLRAGLIRQSTSGVYSFLPLGYKVLQKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA EM +P++Q A+LW ESGR+D YG E++R DR+ + GPTHEEV+T I R Sbjct: 61 MDRAGAQEMFMPSIQPAELWQESGRWDDYGAELMRFKDRHQREFALGPTHEEVITAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP T YQIQ KFRDE RPRFGV+R REFLMKDAYSFD+ EG SY++M+ + Sbjct: 121 DIRSYKELPMTLYQIQTKFRDERRPRFGVLRGREFLMKDAYSFDVDFEGLDQSYDQMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y ++F R L + A+SG +GG +HEF+VL+ GE + S + Sbjct: 181 YKKVFTRCDLNFRAVVADSGAMGGKDTHEFMVLSSIGEDTIAYSDE 226 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 70/146 (47%), Positives = 91/146 (62%), Gaps = 5/146 (3%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVGH+F GTKYS + AT GK + MGSYGIG R VAA+IE HD GIIW Sbjct: 405 GIEVGHVFKLGTKYSEALGATVLDDQGKARPIVMGSYGIGVSRTVAAIIEEHHDEDGIIW 464 Query: 341 PDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 P SVAPF+ LI NIK +Q + E +Y L + G D+ +DD E+ G +F +DLL Sbjct: 465 PLSVAPFQAHLIPVNIKQDEQ--KALAESLYTELQESGLDILFDDRQERPGVKFKDSDLL 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G P++V +G K + VE+K+R +G Sbjct: 523 GLPIRVTIGKK-AGEGIVEVKYRKSG 547 >gi|229006095|ref|ZP_04163783.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228755171|gb|EEM04528.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock1-4] Length = 566 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 119/221 (53%), Positives = 155/221 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LPLG K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPLGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P LQ+A+LW ESGR+ SYG E++R+ DRND+ G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPALQAAELWQESGRWYSYGSELMRMKDRNDREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R GL + A+SG +GG +HEF+ L+D GE + Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMALSDVGEDTI 221 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/162 (43%), Positives = 97/162 (59%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAAV E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLIMGCYGIGVSRTVAAVAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREVGETIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R T ++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEELHAYIAN 563 >gi|228992547|ref|ZP_04152474.1| Prolyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|228998595|ref|ZP_04158182.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|228761063|gb|EEM10022.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|228767181|gb|EEM15817.1| Prolyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 566 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 119/221 (53%), Positives = 155/221 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LPLG K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPLGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P LQ+A+LW ESGR+ SYG E++R+ DRND+ G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPALQAAELWQESGRWYSYGSELMRMKDRNDREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R GL + A+SG +GG +HEF+ L+D GE + Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMALSDVGEDTI 221 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/162 (43%), Positives = 97/162 (59%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAAV E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLIMGCYGIGVSRTVAAVAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREVGETIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R T ++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEELHAYIAN 563 >gi|261855252|ref|YP_003262535.1| prolyl-tRNA synthetase [Halothiobacillus neapolitanus c2] gi|261835721|gb|ACX95488.1| prolyl-tRNA synthetase [Halothiobacillus neapolitanus c2] Length = 568 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 119/221 (53%), Positives = 158/221 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P +AEI SH+LMLR GMI + + G+Y+W PLG + L V A++REE Sbjct: 1 MRSSQFPLNTLKETPTEAEIISHQLMLRAGMIRRLASGLYTWSPLGLRVLRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA+E+ +P +Q A+LW ESGR+ YG E+LR+ DR+D+ GPTHEEV++D R Sbjct: 61 MEGIGALELLMPAIQPAELWQESGRWQKYGPELLRVKDRHDREFCVGPTHEEVISDYARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP +YQ+Q KFRDE+RPRFGVMR+REF+MKDAYSF E + +Y M+ + Sbjct: 121 ELKSYRQLPICYYQVQTKFRDEIRPRFGVMRAREFIMKDAYSFHADVESLRVTYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF RLGLK + A++G IGG SHEF VLAD+GE + Sbjct: 181 YTRIFTRLGLKFRAVEADTGSIGGKGSHEFHVLADSGEDAI 221 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 66/170 (38%), Positives = 95/170 (55%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P T+D+ N D P ++K ARGIEVGH+F GT YS M F GK Sbjct: 377 PEPETADLRNAVEGDPAPDGQDKLAIARGIEVGHVFQLGTTYSEKMHCEFLDEHGKPATA 436 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA-CEKIYAR 371 MG YGIG R+VAA IE +HD GI+WP +APF+++++ I H A E++ A Sbjct: 437 IMGCYGIGVSRIVAAAIEQNHDDNGIVWPVPLAPFEVAIVPINGHRAPAVQAEAERLEAE 496 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L+ G +V DD G + G FA +L+G PL+++V + ++ + E + R Sbjct: 497 LTAQGFNVLLDDRGLRPGVAFADMELIGIPLRIVVSERGLAAGEYETRLR 546 >gi|255065704|ref|ZP_05317559.1| proline--tRNA ligase [Neisseria sicca ATCC 29256] gi|255050022|gb|EET45486.1| proline--tRNA ligase [Neisseria sicca ATCC 29256] Length = 570 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 179/273 (65%), Gaps = 9/273 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSL 271 + L + A A + VH N K DSL Sbjct: 237 PTLPLKG---ERAAAQAELAKVHTPNVKTIDSL 266 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/158 (42%), Positives = 96/158 (60%), Gaps = 3/158 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V RDA +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDAV-RDAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 LLG P ++++G + + + VE R + +SL E+ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRDNQAQTVSLNEI 560 >gi|223939080|ref|ZP_03630964.1| prolyl-tRNA synthetase [bacterium Ellin514] gi|223892240|gb|EEF58717.1| prolyl-tRNA synthetase [bacterium Ellin514] Length = 576 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 163/224 (72%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++ +P L+E P +AEI SHKL+LR G++ + S G+Y+++PLG +AL V I+REE Sbjct: 1 MRWTQTLIPTLKETPAEAEITSHKLLLRAGLVRKLSGGLYTFMPLGLRALRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q ++W +SGRY + + ++ DR K I GPTHEEV+T + Sbjct: 61 MNRAGALELLMPAMQPPEIWEKSGRYVTASEVFFKVRDRAKKEWILGPTHEEVITTLVAG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP FYQIQ KFRDE+RPRFG+MR++EF+MKDAYSFD+T E ++ SY KM+ + Sbjct: 121 EISSYRQLPKNFYQIQTKFRDEIRPRFGLMRAKEFIMKDAYSFDVTDELAQISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GLK++ + A++G +GG SHEF+V A+TGE + V+C Sbjct: 181 YTRIFQRCGLKAVAVEADTGVMGGKFSHEFMVPAETGENEVVYC 224 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 95/161 (59%), Gaps = 4/161 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IEVGH+F GTKYS + A F DGK MG YGIG R + A+IE S+D GII Sbjct: 412 RAIEVGHVFKLGTKYSEKLGALFLDEDGKQKPAVMGCYGIGVTRTLQAIIEQSNDKDGII 471 Query: 340 WPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP SVAP+ + + + A EKIY+ L G DV DD E+ G +F ++L+ Sbjct: 472 WPVSVAPYTVCITPLGVAAGSATMVLAEKIYSELVAQGIDVILDDRDERPGVKFKDSELV 531 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR---LTGIREDMSLEEVIN 436 GFP+++ +G K ++ +VE+K R LT ++ + ++ +++ Sbjct: 532 GFPIRLGIGEKSLAKGEVELKLRGGVLTPVKTEEAVAKILE 572 >gi|309783049|ref|ZP_07677768.1| proline--tRNA ligase [Ralstonia sp. 5_7_47FAA] gi|308918157|gb|EFP63835.1| proline--tRNA ligase [Ralstonia sp. 5_7_47FAA] Length = 574 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 118/226 (52%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + G+Y+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGLYTYMPVGLRVIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q +LW E+GR+D G E+LR DR+++ + PT EEV+TDI R+ Sbjct: 61 MNAAGAVEVLMPVVQPGELWQETGRWDKMGDELLRFKDRHERDFVMQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KM+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAEGLKVSYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + A++G IGG SHEF V+ADTGE + D Sbjct: 181 YTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIIYCPD 226 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 68/171 (39%), Positives = 103/171 (60%), Gaps = 5/171 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D P+ K A RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 382 PEPEVYDLRNVVAGDPSPDGKGTLAVCRGIEVGHVFMLGTRYSEAMNATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ--VCRDACEKIYA 370 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + +D+ R+ ++++A Sbjct: 442 VMGCYGIGITRILGAAIEQNYDARGIIWPASIAPFQVVICPV-GYDRSDAVREEADRLHA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD GE+ G+ FA +L+G P +V+VG + + + K+E + R Sbjct: 501 ELVAAGIDVMLDDRGERPGAMFADWELIGVPFRVVVGDRGLKEGKLEFQGR 551 >gi|229592381|ref|YP_002874500.1| prolyl-tRNA synthetase [Pseudomonas fluorescens SBW25] gi|229364247|emb|CAY51951.1| proline tRNA synthetase [Pseudomonas fluorescens SBW25] Length = 596 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 131/303 (43%), Positives = 186/303 (61%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G K + V AI+REE Sbjct: 26 MRTSQYLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLKVMRKVEAIVREE 85 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G++E+ +P+ Q A+LW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 86 MNAAGSLEVLMPSTQPAELWQESGRWEEYGPELLRFKDRHGRDFCAGPTHEEVITDLMRN 145 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 146 ELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQVTYDRMHQA 205 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + S +D+ Sbjct: 206 YCNVFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSN----------GSDYA 255 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I V + T+ A ++ +L D+ PE K ++A K++LP+ Sbjct: 256 ANIEKAEAVPRETSRPAPAEEL---RLVDT-PETKTIAA----------LVEKFNLPIEK 301 Query: 301 TFK 303 T K Sbjct: 302 TIK 304 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 111/192 (57%), Gaps = 4/192 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF G KYS M G +GK + Sbjct: 403 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGNKYSKAMKCEVLGENGKPITL 462 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 +MG YGIG RVVAA IE ++D KGIIW D++APF+++L+ ++ + R+A +K+YA L Sbjct: 463 EMGCYGIGVSRVVAAAIEQNNDEKGIIWSDALAPFQVALVPLRYETEQVREATDKLYAEL 522 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + ++D +E K R + + Sbjct: 523 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLADGNLEYKSRTEAEAQPLP 582 Query: 431 LEEVINYASHRF 442 + +V+++ R Sbjct: 583 VADVLSFLQARI 594 >gi|332809089|ref|XP_513427.3| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial [Pan troglodytes] Length = 475 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 145/412 (35%), Positives = 222/412 (53%), Gaps = 36/412 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 LQ+ D S +LML+ G+I+ S G Y LP +A++ + +I +E G +++ Sbjct: 59 LQDKSDDLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVN 118 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLP 129 +P+L A+LW + R+D GKE+LRL DR+ K GPTHEE +T + S K SY+ LP Sbjct: 119 MPSLSPAELWQATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAITALIASQKKLSYKQLP 178 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F++LG Sbjct: 179 FLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLG 238 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDFDDIISLNSI 248 L + ++A+ G IGG +SHEF + D GE ++ C + S N + D+ +N Sbjct: 239 LPFVKVQADVGTIGGTVSHEFQLPVDIGEDRLAICPRCSF-----SANMETLDLSQMNCP 293 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 Q P T +GIEVGH FY GTKYS +A F GK Sbjct: 294 ACQ--GPLTKT--------------------KGIEVGHTFYLGTKYSSIFNAQFTNVCGK 331 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACE 366 +MG YG+G R++AA IE + WP +AP++ LI K + +Q + Sbjct: 332 PTLAEMGCYGLGVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEQAASELIG 391 Query: 367 KIYARLS----KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 ++Y ++ ++ +V DD IG++ A+ G+P +I G + + D Sbjct: 392 QLYDHITEAVPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALED 443 >gi|121533721|ref|ZP_01665548.1| prolyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] gi|121307712|gb|EAX48627.1| prolyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] Length = 567 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 116/225 (51%), Positives = 157/225 (69%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S + P L+E P +AE+ SH+LMLR GMI + + GIY++LPL + L + IIREE Sbjct: 1 MRASNLYAPTLRETPAEAEVISHQLMLRAGMIRKAAGGIYTYLPLAWRVLKKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A++W ++GR+D YG EM RL DR+ + GPTHEE++T + R Sbjct: 61 MDAKGGQELLMPIVQPAEIWKKTGRWDVYGDEMFRLKDRHQRDFCLGPTHEEMITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ K+RDE+RPRFG+MR REF+MKD YSFD EG SYNKM+ + Sbjct: 121 EVRSYRQLPLLLYQIQNKYRDEIRPRFGLMRGREFIMKDLYSFDRDEEGLNESYNKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 Y R+F R GL P+ A+SG IGG SHEF+VLA++GE V+C+ Sbjct: 181 YTRVFTRCGLTFRPVEADSGAIGGSGSHEFMVLAESGEAAIVYCT 225 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 64/147 (43%), Positives = 94/147 (63%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIEVG +F TKYS + AT+ +G++ + MG YGIG R +AA IE +HD G Sbjct: 400 TARGIEVGQVFKLYTKYSNALGATYLDENGQERPIVMGCYGIGVTRTMAAAIEQNHDENG 459 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP +APF + +I + A ++ E++Y L+K G + DD E+ G +F ADL Sbjct: 460 IIWPVPIAPFHVVVIPVNAKEEAQMSLAEEVYTELNKAGVEAILDDRNERPGVKFKDADL 519 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +G+PL+V +G K +S+ +VE+K R TG Sbjct: 520 IGYPLRVTIGPKALSEGRVEVKVRRTG 546 >gi|34303926|ref|NP_689481.2| probable prolyl-tRNA synthetase, mitochondrial precursor [Homo sapiens] gi|73919761|sp|Q7L3T8|SYPM_HUMAN RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial; AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags: Precursor gi|33873290|gb|AAH11758.2| Prolyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|39644604|gb|AAH07956.2| Prolyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|56204888|emb|CAI18996.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|119627074|gb|EAX06669.1| prolyl-tRNA synthetase (mitochondrial)(putative) [Homo sapiens] gi|158260381|dbj|BAF82368.1| unnamed protein product [Homo sapiens] gi|312152388|gb|ADQ32706.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [synthetic construct] Length = 475 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 145/412 (35%), Positives = 222/412 (53%), Gaps = 36/412 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 LQ+ D S +LML+ G+I+ S G Y LP +A++ + +I +E G +++ Sbjct: 59 LQDKSDDLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVN 118 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLP 129 +P+L A+LW + R+D GKE+LRL DR+ K GPTHEE +T + S K SY+ LP Sbjct: 119 MPSLSPAELWQATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAITALIASQKKLSYKQLP 178 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F++LG Sbjct: 179 FLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLG 238 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDFDDIISLNSI 248 L + ++A+ G IGG +SHEF + D GE ++ C + S N + D+ +N Sbjct: 239 LPFVKVQADVGTIGGTVSHEFQLPVDIGEDRLAICPRCSF-----SANMETLDLSQMNCP 293 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 Q P T +GIEVGH FY GTKYS +A F GK Sbjct: 294 ACQ--GPLTKT--------------------KGIEVGHTFYLGTKYSSIFNAQFTNVCGK 331 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACE 366 +MG YG+G R++AA IE + WP +AP++ LI K + +Q + Sbjct: 332 PTLAEMGCYGLGVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEQAASELIG 391 Query: 367 KIYARLS----KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 ++Y ++ ++ +V DD IG++ A+ G+P +I G + + D Sbjct: 392 QLYDHITEAVPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALED 443 >gi|167035206|ref|YP_001670437.1| prolyl-tRNA synthetase [Pseudomonas putida GB-1] gi|189083507|sp|B0KTK4|SYP_PSEPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166861694|gb|ABZ00102.1| prolyl-tRNA synthetase [Pseudomonas putida GB-1] Length = 571 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 159/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHQRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNMYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +F RLGL P++A++G IGG SHEF VLA++GE V S Sbjct: 181 YSNVFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFS 224 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 76/191 (39%), Positives = 112/191 (58%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + V RGIEVGHIF GTKYS + G +GK + Sbjct: 378 PVPQVADLRNVVEGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEALKCQVLGENGKPVVL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ V R+A +K+YA L Sbjct: 438 SMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETDVVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + ++D +E KHR + + Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLADGNLEYKHRTEQDAQALP 557 Query: 431 LEEVINYASHR 441 L EV+ + R Sbjct: 558 LNEVLTFLQAR 568 >gi|331016426|gb|EGH96482.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 544 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 131/303 (43%), Positives = 188/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + S +D+ Sbjct: 181 YSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSN----------GSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I V + A AAT ++ +L D+ N + A+ +E + LP+ Sbjct: 231 ANIEKAEAVPREKARAAATEEL---RLVDT--PNAKTIAQLVE---------GFGLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 97/167 (58%), Gaps = 4/167 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGQGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + G +V DD ++ G +FA +L+G P +++V + +++ +E Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLE 544 >gi|28871133|ref|NP_793752.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|81840044|sp|Q87Y24|SYP_PSESM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|28854383|gb|AAO57447.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] Length = 571 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 131/303 (43%), Positives = 188/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAVGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + S +D+ Sbjct: 181 YSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSN----------GSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I V + A AAT ++ +L D+ N + A+ +E + LP+ Sbjct: 231 ANIEKAEAVPREKARAAATEEL---RLVDT--PNAKTIAQLVE---------GFGLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 109/191 (57%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGQGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINYASHR 441 + +V+++ R Sbjct: 558 VADVLSFIQGR 568 >gi|330968902|gb|EGH68968.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 571 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 161/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y++M ++ Sbjct: 121 ELNSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFS 224 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 4/187 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+L+ ++ R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALVPLRYETDAVREATDKLYADL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINY 437 + +V+++ Sbjct: 558 VADVLSF 564 >gi|330975337|gb|EGH75403.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 571 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 161/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y++M ++ Sbjct: 121 ELNSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFS 224 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 4/187 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+L+ ++ R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALVPLRYETDAVREATDKLYADL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINY 437 + +V+++ Sbjct: 558 VADVLSF 564 >gi|330872665|gb|EGH06814.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 571 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 126/278 (45%), Positives = 181/278 (65%), Gaps = 14/278 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + S +D+ Sbjct: 181 YSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSN----------GSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 I V + A AAT ++ +L D+ P+ K ++ Sbjct: 231 ANIEKAEAVPREKARAAATEEL---RLVDT-PDAKTIA 264 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ + RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPAVADLRNVVAGDPSPDGQGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINYASHR 441 + +V+++ R Sbjct: 558 VADVLSFIQGR 568 >gi|213969174|ref|ZP_03397313.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] gi|301384830|ref|ZP_07233248.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13] gi|302064183|ref|ZP_07255724.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40] gi|302130620|ref|ZP_07256610.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926172|gb|EEB59728.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] Length = 571 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 131/303 (43%), Positives = 188/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + S +D+ Sbjct: 181 YSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSN----------GSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I V + A AAT ++ +L D+ N + A+ +E + LP+ Sbjct: 231 ANIEKAEAVPREKARAAATEEL---RLVDT--PNAKTIAQLVE---------GFGLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 109/191 (57%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGQGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 498 TTAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRSLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINYASHR 441 + +V+++ R Sbjct: 558 VADVLSFIQGR 568 >gi|330950620|gb|EGH50880.1| prolyl-tRNA synthetase [Pseudomonas syringae Cit 7] Length = 571 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 161/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y++M ++ Sbjct: 121 ELNSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFS 224 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 4/187 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+L+ ++ R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALVPLRYETDAVREATDKLYADL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINY 437 + +V+++ Sbjct: 558 VADVLSF 564 >gi|47569097|ref|ZP_00239786.1| prolyl-tRNA synthetase [Bacillus cereus G9241] gi|47554259|gb|EAL12621.1| prolyl-tRNA synthetase [Bacillus cereus G9241] Length = 566 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 123/253 (48%), Positives = 167/253 (66%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GLK + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLKFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDESGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGESIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|66044647|ref|YP_234488.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a] gi|81308436|sp|Q4ZWM2|SYP_PSEU2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|63255354|gb|AAY36450.1| Prolyl-tRNA synthetase, bacterial [Pseudomonas syringae pv. syringae B728a] Length = 571 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 161/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFS 224 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 4/187 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+L+ ++ R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALVPLRYETDAVREATDKLYADL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINY 437 + +V+++ Sbjct: 558 VADVLSF 564 >gi|255020885|ref|ZP_05292941.1| Prolyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] gi|254969676|gb|EET27182.1| Prolyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] Length = 572 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 160/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP+L+E P +AE+ SH+L+LR G I + + G+Y+WLPLG + L V ++REE Sbjct: 1 MRASQSFLPLLKETPAEAELVSHQLLLRGGFIRRLASGLYTWLPLGLRVLRRVEQVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + +Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV++D+ R Sbjct: 61 MDRSGAQEILMTVVQPAELWQESGRWELYGPELLRLKDRHQRDFCLGPTHEEVISDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP YQIQ KFRDE+RPRFG+MR+REF+MKDAYSF + + Y M+ + Sbjct: 121 EIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRAREFIMKDAYSFHMDQASLEEGYRAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y R+F RLGL + A+SG IGG SHEF VLAD+GE + FC Sbjct: 181 YCRVFQRLGLDFRAVEADSGAIGGKRSHEFHVLADSGEDAIAFC 224 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 1/144 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIEVGH+F GT+YS + G++ V MG YGIG R+VAA +E SHD +GI Sbjct: 408 CRGIEVGHVFQLGTRYSERLGVRVLDEGGREQTVLMGCYGIGVSRIVAATVEQSHDERGI 467 Query: 339 IWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 +WP+++APF++ ++ I A +++ RL G DD E+ G QFA DL Sbjct: 468 VWPEALAPFRVGIVAINGRKSPAVLSAALELHDRLEAAGIPTLLDDRDERPGVQFATLDL 527 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 +G P +V+V K ++ +E + R Sbjct: 528 IGLPHRVVVSDKLLAQGMLEYRAR 551 >gi|225076521|ref|ZP_03719720.1| hypothetical protein NEIFLAOT_01569 [Neisseria flavescens NRL30031/H210] gi|224952200|gb|EEG33409.1| hypothetical protein NEIFLAOT_01569 [Neisseria flavescens NRL30031/H210] Length = 570 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 128/275 (46%), Positives = 179/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V I+REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EVNSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFARLGLEFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 237 PTLPLKG---ERAAAQAELTKVHTPNVKTIESLVE 268 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRNKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++APF++ ++ N K + V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 VWTKAMAPFEVVIVPMNYKKSEAV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ EV+ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRDNQAQAVAISEVV 561 >gi|254483545|ref|ZP_05096771.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] gi|214036202|gb|EEB76883.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] Length = 580 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 157/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S + + +E P DAE+ SH+LMLR G+I + + G+YSWLPLG + L V ++REE Sbjct: 11 MRTSNFLIATQKETPADAEVISHQLMLRAGLIRKLAAGLYSWLPLGLRVLRKVENVVREE 70 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+S+P +Q A+LW ESGR++ YG E+LR+ DR+ + GPTHEEV+TD+ R+ Sbjct: 71 MNAAGAQEVSMPVVQPAELWQESGRWEQYGSELLRIQDRHQRDFCLGPTHEEVITDLIRN 130 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K RDE+RPRFG+MRSREFLMKDAYSF + + +Y M + Sbjct: 131 EVKSYKQLPLNMYQIQTKVRDEIRPRFGIMRSREFLMKDAYSFHASQASLEDTYQIMHGA 190 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y ++F RLGL P+ A++G IGG SHEF VLA++GE + S Sbjct: 191 YTKVFTRLGLDFRPVIADTGSIGGSASHEFHVLANSGEDDIAFS 234 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 115/193 (59%), Gaps = 5/193 (2%) Query: 254 APYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P + +D+ D+ P+ K RGIEVGHIF GTKYS M A +GK+ Sbjct: 387 CPLSQVADLREVVEGDASPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKAEVLNENGKNVT 446 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIY 369 + MG YGIG RVVAA IE +HD KGIIWP+++APF+++++ N++ + V + E +Y Sbjct: 447 MTMGCYGIGVSRVVAAAIEQNHDDKGIIWPEAMAPFQLAIVPLNMQKSEAVA-NCAEALY 505 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A L VG DV DD E+ G +FA +L+G P ++++G + +++ ++E K R + + Sbjct: 506 ANLQSVGVDVLLDDRNERPGVKFADMELIGIPHRIVIGDRALAEGQIEYKGRRDEDSQLI 565 Query: 430 SLEEVINYASHRF 442 E+++++ + Sbjct: 566 PQEDIVSFLQEQL 578 >gi|330964813|gb|EGH65073.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 571 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 126/278 (45%), Positives = 181/278 (65%), Gaps = 14/278 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + S +D+ Sbjct: 181 YSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSN----------GSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 I V + A AAT ++ +L D+ P+ K ++ Sbjct: 231 ANIEKAEAVPREKARAAATEEL---RLVDT-PDAKTIA 264 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 109/191 (57%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGQGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINYASHR 441 + +V+++ R Sbjct: 558 VADVLSFIQGR 568 >gi|304312891|ref|YP_003812489.1| Prolyl-tRNA synthetase [gamma proteobacterium HdN1] gi|301798624|emb|CBL46856.1| Prolyl-tRNA synthetase [gamma proteobacterium HdN1] Length = 574 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E+P DAE+ SHKLMLR GMI + + G+Y+W P G + L V I+REE Sbjct: 1 MRASQYLLATLREDPADAEVISHKLMLRAGMIRRLAAGLYTWTPTGLRVLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P Q A+LW ESGR+ +YG E+LR DR+ + + GPTHEEV++D+ R+ Sbjct: 61 MDRAGAQEVLMPVTQPAELWQESGRFQAYGPELLRFKDRHARDFVLGPTHEEVISDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY+ LP FYQIQ KFRDE RPRFGVMR+REFLMKD+YSF +T + + +Y M+ + Sbjct: 121 NVQSYKQLPANFYQIQTKFRDETRPRFGVMRAREFLMKDSYSFHMTEDCLRETYQVMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL+ + A++G IGG+ SHEF VLA GE + S Sbjct: 181 YTAIFTRLGLEFRAVLADTGSIGGNNSHEFHVLASAGEDSIAFS 224 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 78/193 (40%), Positives = 116/193 (60%), Gaps = 3/193 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A +A +D+ N D P+ K + RGIEVGHIF GTKYS ++ T +GK Sbjct: 380 ANFAEVADLRNVVEGDPSPDGKGEILIRRGIEVGHIFQLGTKYSKALNVTVLDENGKSQV 439 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYA 370 + MG YGIG RVVAA IE ++D +GIIWPD++APF I+LI + H A E +Y Sbjct: 440 LPMGCYGIGVSRVVAAAIEQNNDAQGIIWPDAIAPFHIALIPMNQHKSPRVHAAAEALYE 499 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 RL + G +VF+DD E+ G +FA A+L+G P ++++G + + +VE KHR D+ Sbjct: 500 RLKQAGYEVFYDDRKERPGVKFADAELIGIPHRIVIGDRGLDQQQVEYKHRTDKETSDVG 559 Query: 431 LEEVINYASHRFS 443 L++++ + R + Sbjct: 560 LDQLVEFLQTRVT 572 >gi|284799796|ref|ZP_05984887.2| proline--tRNA ligase [Neisseria subflava NJ9703] gi|284796829|gb|EFC52176.1| proline--tRNA ligase [Neisseria subflava NJ9703] Length = 595 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 128/275 (46%), Positives = 179/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V I+REE Sbjct: 26 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENIVREE 85 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 86 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 145 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 146 EVNSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 205 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 206 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 261 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 262 PTLPLKG---ERAAAQAELTKVHTPNVKTIESLVE 293 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 429 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 488 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 489 VWTKAMAPFEVVIVPMNYKKSDAV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 547 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ EV+ Sbjct: 548 LLGIPHRIVIGDRALKEGNVEYAERRNNQAQAVAVSEVV 586 >gi|254673039|emb|CBA07634.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha275] Length = 599 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 128/275 (46%), Positives = 179/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 265 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 266 PTLPLKG---ERAAAQAVLTKVHTPNVKTIESLVE 297 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 433 ARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 492 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 493 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 551 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 552 LLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 590 >gi|257467949|ref|ZP_05632045.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|317062235|ref|ZP_07926720.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|313687911|gb|EFS24746.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] Length = 569 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AE ASHKL+LR MI + + G+Y++LPLG KAL V I+REE Sbjct: 1 MRFSKSYIKTLKETPKEAETASHKLLLRASMIKKLTSGVYTYLPLGYKALKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ +P LQ A+LW ESGR+D G M++L DRN + + GPTHEEV+TD+ R+ Sbjct: 61 MDRAGSQEILMPVLQPAELWKESGRWDVMGPLMMKLQDRNKRDFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ KFRDE+RPRFG+MR REF+MKDAYSF T E + M + Sbjct: 121 DISSYKALPLSLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHATAESLDEEFLNMRDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GLK P+ A+SG IGG S EF VLAD+GE + ++C Sbjct: 181 YSRIFSRCGLKFRPVEADSGAIGGSGSQEFHVLADSGEDEIIYC 224 Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 70/161 (43%), Positives = 99/161 (61%), Gaps = 5/161 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIEVGHIF G KYS ++ATF G+ + MG YGIG R +A+ IE ++D G Sbjct: 403 SARGIEVGHIFKLGDKYSKALNATFLDDKGESKVMLMGCYGIGVSRTLASAIEQNNDEFG 462 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP+ + +I N+K +QV E+IY L G D DD E+ G +F A Sbjct: 463 IIWPTALAPYIVDVIPANVKNEEQV--KVAEEIYEALLNDGIDSMIDDRDERPGFKFKDA 520 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DL+GFP +V+ G K + VE+K R TG ++S ++V++ Sbjct: 521 DLIGFPFKVVSG-KRAGEGIVELKIRRTGETLEISKDDVVS 560 >gi|121609349|ref|YP_997156.1| prolyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] gi|152112961|sp|A1WKI1|SYP_VEREI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|121553989|gb|ABM58138.1| prolyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] Length = 581 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 118/226 (52%), Positives = 161/226 (71%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L++ P DAE+ SH+LM+R G+I + GIYS++P+G + L + AI+REE Sbjct: 1 MKASRFFVSTLKDAPADAEVVSHQLMMRAGLIKKLGAGIYSYMPMGLRVLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+LW E+GR+D G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVELTMPVVQPAELWQETGRFDKMGPELLRIQDRHGRDFVVQPTSEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD P +K SY M + Sbjct: 121 ELRSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDPAAAKASYLVMEQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y RIF R GL + A+SG IGGDLS EF V+A TGE V+C + Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVVAATGEDAIVYCPQ 226 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K V A RGIEVGH+FY GTKYS M+A+F +GK ++MG Sbjct: 393 VADLRNVVAGDRSPDGKGVLAIERGIEVGHVFYLGTKYSRAMNASFLDENGKPQPLEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + I + A +K+YA Sbjct: 453 YGIGITRLPAAAIEQNHDARGIIWPDAIAPFTAVICPIGMERSAAVQAAADKLYADFLAA 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G+ FA +L+G P +V++ + + + ++E +HR ++ +++ Sbjct: 513 GIDVLLDDRGERPGAMFADWELIGVPHRVVISERGLKEDQLEYQHRRDQSATKVAAADIL 572 Query: 436 NYASHRFS 443 + R + Sbjct: 573 AHVKGRMT 580 >gi|332992302|gb|AEF02357.1| prolyl-tRNA synthetase [Alteromonas sp. SN2] Length = 554 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 116/226 (51%), Positives = 157/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLATQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLNKVANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G +E+ +P +Q ADLW ESGR++ YG E+LR+ DR+ + + GPTHEEV+T + R+ Sbjct: 61 MNKAGGVEVLMPVVQPADLWEESGRWEEYGPELLRIKDRHQRDFVLGPTHEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE+RPRFG+MR REF MKDAYSF L +Y M+ + Sbjct: 121 EISSYKQLPINLYQIQTKFRDEVRPRFGIMRGREFTMKDAYSFHLDDTCLDKTYQTMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF+R+GL + A+SG IGG+ SHEF VLA++GE + + D Sbjct: 181 YGNIFNRMGLDYRAVIADSGSIGGNHSHEFHVLAESGEDAIAFASD 226 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 4/189 (2%) Query: 252 WTAPYAATSDVHNEKLFDSLPE-NKRVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 WT T+D+ N D+ P+ N + RGIEVGHIF G+KYS M+ GK Sbjct: 363 WTVDIQ-TADLRNIVAGDASPDGNGTIEIKRGIEVGHIFQLGSKYSEAMNCGVLSETGKH 421 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKI 368 + MG YGIG R+VAA IE +HD GI+WPD +APFKI+LI + H ++A E + Sbjct: 422 QTLTMGCYGIGVSRIVAAAIEQNHDKYGIMWPDPIAPFKIALIPMNMHKSHRIKEAAEAL 481 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 Y +L +G DV +DD E+ G F +L+G P +++G + + + ++E K+R TG ++ Sbjct: 482 YEQLIALGIDVLFDDRKERPGVMFNDMELIGIPHSIVIGERNLDNQQIEYKNRRTGEKQL 541 Query: 429 MSLEEVINY 437 + L+ ++ Sbjct: 542 LDLDSAKDF 550 >gi|152996360|ref|YP_001341195.1| prolyl-tRNA synthetase [Marinomonas sp. MWYL1] gi|189083502|sp|A6VXT1|SYP_MARMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150837284|gb|ABR71260.1| prolyl-tRNA synthetase [Marinomonas sp. MWYL1] Length = 574 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 124/262 (47%), Positives = 172/262 (65%), Gaps = 7/262 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L++ P DA + SH+LM+R GMI Q SKG+Y+WLP G K + I+R+E Sbjct: 1 MRASNYLFSTLRDAPTDAVVTSHQLMIRAGMIRQVSKGLYTWLPTGLKVFRKIENIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G++E+ +P +Q A+LW E+GR+ YG E+LRL DR+ + GPTHEEV+T++ R+ Sbjct: 61 MEKAGSLEVMMPGVQPAELWQETGRWQKYGPELLRLQDRHGREYCLGPTHEEVITELARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREF MKDAYSF + E + +Y+ M + Sbjct: 121 ELTSYKQLPMNFFQIQTKFRDEVRPRFGVMRSREFCMKDAYSFHVGAESLQETYDIMHKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F R+GL P+RA++G IGG SHEF VLAD+GE + S D DF + N + Sbjct: 181 YCNVFDRIGLNYRPVRADTGSIGGAYSHEFHVLADSGEDDIAFS-DSSDF---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDV 262 + I L E+ AP ++V Sbjct: 237 EAICLK---EKADAPTQDITEV 255 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 107/182 (58%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + V RGIEVGHIF G +Y+ + AT +GK + MG Sbjct: 388 VADIRNVVEGDPSPDGQGTIVIKRGIEVGHIFQLGQQYAEALKATVLDENGKAQVMHMGC 447 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+VAA IE + D KGI+WP+S+APF I+++ + + R C+++YA L Sbjct: 448 YGIGVSRIVAAAIEQNFDEKGILWPESIAPFDIAIVAMNYDKSEAVRTECDRLYAELKAK 507 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G +FA +LLG P +++VG K + +E K+R G ED+++ + + Sbjct: 508 GLDVLLDDRKERPGVKFADCELLGIPHRLVVGDKGLEKGTLEYKYRKAGDNEDIAIADAV 567 Query: 436 NY 437 + Sbjct: 568 EF 569 >gi|260220337|emb|CBA27773.1| Prolyl-tRNA synthetase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 580 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ + L+E P DAE+ SHKLM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFLISTLKEAPTDAEVVSHKLMMRAGMIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+LW E+GR+D G E+LR+ DR+++ + PT EEV+TDI R Sbjct: 61 MNRAGAVELTMPVIQPAELWQETGRFDKMGPELLRIKDRHERDYVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD + +K SY M + Sbjct: 121 EIKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQDSAKASYQVMAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL + A+SG IGGDLS EF V+A TGE V+C Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC 224 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 76/187 (40%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D+ P+ K V A RGIEVGH+FY GTKYS M+ATF +GK +++MG Sbjct: 392 VADLRNVVEGDASPDGKGVLAIERGIEVGHVFYLGTKYSKAMNATFLDVNGKPQFMEMGC 451 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD KGIIWPD++APF + L I + A +K+Y L Sbjct: 452 YGIGITRLPAAAIEQNHDDKGIIWPDALAPFTVVLCPINPDRFPDVKAAADKLYEELLSA 511 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G+ FA +L+G P +V +G + + + VE +HR + + E+ Sbjct: 512 GVDVILDDRNERPGAMFADWELIGVPHRVNIGDRGLKEGVVEYQHRRESAATSVPVAEIA 571 Query: 436 NYASHRF 442 + R Sbjct: 572 SLLLGRL 578 >gi|269467800|gb|EEZ79555.1| prolyl-tRNA synthetase [uncultured SUP05 cluster bacterium] Length = 560 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 121/239 (50%), Positives = 164/239 (68%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ + +P +E P DA+I SH+LM+R G+I + + G+YS+LP+G + L V AIIREE Sbjct: 1 MKTTNLLIPTQKEAPNDAQIISHQLMIRAGLISKLASGLYSYLPMGLRVLKKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA E+ +P Q A+LW ESGR++ YG E+LR DR+++ GPTHEEV+T + Sbjct: 61 MNKSGAQEVLMPVAQPAELWQESGRWEQYGPELLRFNDRHNRKFCLGPTHEEVITHLAAQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF L + +++ M + Sbjct: 121 YIRSYKQLPMNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHLDQNSLQQTFDVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y IF+RLGL P+ A+SG IGGD S EF VLAD+GE + C D D+ E F Sbjct: 181 YCNIFNRLGLDYRPVLADSGSIGGDNSVEFHVLADSGEDAI-CFSDRSDYAANIEKVAF 238 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 105/194 (54%), Gaps = 3/194 (1%) Query: 252 WTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 W +D+ N D P+ K + RGIEVGHIF GTKYS M A G GK Sbjct: 366 WQGIEFNEADLRNAVEGDVSPDGKGRLLIKRGIEVGHIFQLGTKYSQAMKANVIGESGKA 425 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKI 368 MG YGIG RV+AA IE +HD +GII+P+S+APF++ ++ I + +D +++ Sbjct: 426 VTTTMGCYGIGVTRVIAASIEQNHDDRGIIFPESIAPFQVVIVPINYNKSTRVKDLADQL 485 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 Y + G +V DD E+ G FA ++LLG P ++++ + VE K R + + Sbjct: 486 YRQCLDAGIEVLLDDRKERAGIMFADSELLGIPHRMVLSDTHADNGNVEYKARNNPDKVE 545 Query: 429 MSLEEVINYASHRF 442 + +EV+++ + Sbjct: 546 VKFDEVLSFIQSKL 559 >gi|330823518|ref|YP_004386821.1| Prolyl-tRNA synthetase [Alicycliphilus denitrificans K601] gi|329308890|gb|AEB83305.1| Prolyl-tRNA synthetase [Alicycliphilus denitrificans K601] Length = 581 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM+R G+I + GIYS++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMMRAGLIKKLGAGIYSYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E ++P +Q A+LW E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVECTMPVVQPAELWQETGRFEKMGPELLRIQDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD G+K SY M + Sbjct: 121 ELRSYKQLPRNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQAGAKASYQAMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL+ + A+SG IGGDLS EF V+A TGE V+C Sbjct: 181 YRRIFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC 224 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A +D+ N D P+ K V A RGIEVGH+FY TKYS M+ATF G DGK + +MG Sbjct: 392 AVADLRNVVAGDPSPDGKGVLAIERGIEVGHVFYLSTKYSKAMNATFLGEDGKPAFFEMG 451 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSK 374 YGIG R+ AA IE +HD +GIIWPD++APF + + I + R EK++ L Sbjct: 452 CYGIGITRLPAAAIEQNHDERGIIWPDAIAPFTVVICPIGMDRSEEVRAVAEKLHGELLA 511 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD GE+ G+ FA +L+G P ++ +G K + + +VE HR + + E+ Sbjct: 512 SGIDVILDDRGERPGAMFADWELIGVPHRITIGDKGLKEGQVEYLHRRDAGATKVGVAEI 571 Query: 435 INYASHRFS 443 + + R + Sbjct: 572 LAHVKERVA 580 >gi|241763800|ref|ZP_04761846.1| prolyl-tRNA synthetase [Acidovorax delafieldii 2AN] gi|241366932|gb|EER61337.1| prolyl-tRNA synthetase [Acidovorax delafieldii 2AN] Length = 580 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 118/226 (52%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMTRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+LW E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVELTMPVVQPAELWQETGRFEKMGPELLRIQDRHGRDFVVQPTSEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD +K SY M + Sbjct: 121 ELKSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQAAAKASYQVMAAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y RIF R GL + A+SG IGGDLS EF V+A TGE V+C + Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPQ 226 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 76/187 (40%), Positives = 109/187 (58%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + A RGIEVGH+FY GTKYS M+ATF G DGK + +MG Sbjct: 392 VADLRNVVAGDRSPDGRGELAIERGIEVGHVFYLGTKYSKGMNATFLGDDGKPAFFEMGC 451 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + + + + A EK+YA L Sbjct: 452 YGIGVTRLPAAAIEQNHDERGIIWPDAIAPFTVVICPVGMDRSDAVKAAAEKLYADLLAA 511 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G+ FA +L+G P +V +G K + + VE +HR +++ +++ Sbjct: 512 GVDVILDDRGERPGAMFADWELIGVPHRVTIGDKSLKEGVVEYQHRRDAAATKVAVADIL 571 Query: 436 NYASHRF 442 R Sbjct: 572 ARVKGRM 578 >gi|325140439|gb|EGC62960.1| prolyl-tRNA synthetase [Neisseria meningitidis CU385] Length = 599 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 128/275 (46%), Positives = 178/275 (64%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANVELA 265 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 266 PTLPLKG---ERAAAQAELTKVHTPNVKTIESLVE 297 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 95/158 (60%), Gaps = 3/158 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F KY+ M+ F +GK ++MG YGIG RVVAA IE ++D KGII Sbjct: 434 RGIEVGHVFQLRDKYTHAMNVNFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGII 493 Query: 340 WPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 W ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++L Sbjct: 494 WTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSEL 552 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LG P ++++G + + + VE R + +++ E++ Sbjct: 553 LGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 590 >gi|145803|gb|AAA23710.1| RNA synthesis factor (drpA) [Escherichia coli] Length = 516 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 112/204 (54%), Positives = 151/204 (74%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+++P FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKHVPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGG 204 Y +IF R+GL ++A++G IGG Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGG 204 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 83/132 (62%), Gaps = 3/132 (2%) Query: 259 TSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P + + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 VADIRNVVAGDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 442 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 502 Query: 376 GCDVFWDDMGEQ 387 G +V DD E+ Sbjct: 503 GIEVLLDDRKER 514 >gi|319761647|ref|YP_004125584.1| prolyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|317116208|gb|ADU98696.1| prolyl-tRNA synthetase [Alicycliphilus denitrificans BC] Length = 581 Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM+R G+I + GIYS++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMMRAGLIKKLGAGIYSYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E ++P +Q A+LW E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVECTMPVVQPAELWQETGRFEKMGPELLRIQDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD G+K SY M + Sbjct: 121 ELRSYKQLPRNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQAGAKASYQAMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL+ + A+SG IGGDLS EF V+A TGE V+C Sbjct: 181 YRRIFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC 224 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 78/189 (41%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A +D+ N D P+ K V A RGIEVGH+FY GTKYS M+ATF G DGK + +MG Sbjct: 392 AVADLRNVVAGDPSPDGKGVLAIERGIEVGHVFYLGTKYSKAMNATFLGEDGKPAFFEMG 451 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSK 374 YGIG R+ AA IE +HD +GIIWPD++APF + + I + R EK++ L Sbjct: 452 CYGIGITRLPAAAIEQNHDERGIIWPDAIAPFTVVICPIGMDRSEEVRAVAEKLHGELLA 511 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD GE+ G+ FA +L+G P ++ +G K + + +VE HR + + E+ Sbjct: 512 SGIDVILDDRGERPGAMFADWELIGVPHRITIGDKGLKEGQVEYLHRRDAGATKVGVAEI 571 Query: 435 INYASHRFS 443 + + R + Sbjct: 572 LAHVKERVA 580 >gi|296314467|ref|ZP_06864408.1| proline--tRNA ligase [Neisseria polysaccharea ATCC 43768] gi|296838764|gb|EFH22702.1| proline--tRNA ligase [Neisseria polysaccharea ATCC 43768] Length = 570 Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 130/275 (47%), Positives = 181/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTAYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANVELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L E+ TA +A + VH N K +SL E Sbjct: 237 PTLPLKG--ERATA-HAELTKVHTPNVKTIESLLE 268 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKTMAPFEVVIVPMNYKKSDAV-REATDKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRDNEVQAVAIGEIV 561 >gi|325128468|gb|EGC51349.1| prolyl-tRNA synthetase [Neisseria meningitidis N1568] Length = 570 Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 128/275 (46%), Positives = 179/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A VH N K +SL E Sbjct: 237 PTLPLKG---ERAAAQAELVKVHTPNVKTIESLVE 268 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 561 >gi|152981235|ref|YP_001354678.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille] gi|166980130|sp|A6T2D1|SYP_JANMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|151281312|gb|ABR89722.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 577 Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 121/224 (54%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V AIIREE Sbjct: 1 MRASRFFISTLKEAPSDAEIVSHKLMMRAGMIKKIGSGIYTYMPMGLRVIRKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N AIE+ +P +Q A+LW E+GR+D G E++R+ DR+ + PT EEV+TD+ R+ Sbjct: 61 MNNAHAIELLMPLVQPAELWQETGRWDKMGAELMRVKDRHGREFAIQPTSEEVVTDVVRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD +G K SY MF + Sbjct: 121 EIKSYRQLPINFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDIDGLKKSYQIMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y++IF+R GL+ + A++G IGG SHEF V+ADTGE V+C Sbjct: 181 YVKIFNRFGLQFRAVAADNGAIGGSGSHEFHVIADTGEDALVYC 224 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 109/193 (56%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A D+ N D P+ K A RGIEVGH+F GT YS M AT+ +GK + Sbjct: 385 PEAQVFDIRNVVEGDPSPDGKGTLAIQRGIEVGHVFQLGTAYSESMKATYLDENGKPQLI 444 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE + D KGIIWP ++APF++ L + + + +K+Y Sbjct: 445 QMGCYGIGVTRILGAAIEQNFDDKGIIWPTALAPFEVVLCPMGYDRSEGVKAETDKLYEA 504 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G+ FA +L+G P ++++G + + + K+E + R ++L Sbjct: 505 LQAAGVDVILDDRGERPGAMFADWELIGVPHRIVIGDRGLKEGKLEYQGRRDAAATPVAL 564 Query: 432 EEVINYASHRFSN 444 EE++ + + +N Sbjct: 565 EEMLGFVQAKLAN 577 >gi|312143669|ref|YP_003995115.1| prolyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] gi|311904320|gb|ADQ14761.1| prolyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] Length = 568 Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +LP L+E+P +A+I SHKLMLR G++ HS GIYS+LPLG + + + I R+ Sbjct: 1 MRMSNLYLPTLKEDPAEADITSHKLMLRAGLMRNHSAGIYSYLPLGYRVIKKIENITRKH 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +GA E+ +P LQ+A +W +S R+D +G M+RL DR D+ GPTHEEV+TD+ + Sbjct: 61 MDASGAQEVLLPILQTAQIWKDSKRWDKFGPLMMRLRDRKDREYCLGPTHEEVVTDLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY++LP YQIQ K RDE+RPRFGVMR REF+MKDAYS D+ EG SY M+ + Sbjct: 121 EIRSYKDLPLNLYQIQTKVRDEIRPRFGVMRGREFIMKDAYSLDIDYEGLDKSYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y + F GL ++ + A++G +GG SHEF+VLAD+GE QV FC Sbjct: 181 YEKTFAECGLDAVAVEADTGAMGGKDSHEFMVLADSGEDQVAFC 224 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/137 (41%), Positives = 89/137 (64%), Gaps = 1/137 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVGHIF GTKYS M A + +G+ + MGSYGIG R+VAA IE ++D GIIW Sbjct: 404 GIEVGHIFKLGTKYSENMGANYLDENGRTQPIVMGSYGIGITRLVAAAIEQNNDEYGIIW 463 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P ++AP++I ++ + +D+ + E+IY L G +V DD E+ G +F ++L+G Sbjct: 464 PKAIAPYQIIILAL-GNDEAVAEKSEEIYQELEAEGWEVLLDDRKERAGVKFNDSELIGI 522 Query: 401 PLQVIVGSKFVSDSKVE 417 PL++ +GS+ + + ++E Sbjct: 523 PLRLTIGSRSLENGEIE 539 >gi|327441016|dbj|BAK17381.1| prolyl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 568 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 119/263 (45%), Positives = 174/263 (66%), Gaps = 10/263 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+++K F+P L+ENP DA++ SH+++LR G I Q++ G+YS+LPL ++ L + IIREE Sbjct: 1 MKQTKTFIPTLRENPSDADVKSHRMLLRAGFIRQNAAGVYSYLPLARRVLSKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+ +P LQ A+LW ESGR+++YG E++RL DR+D+ G THEEV+T + R Sbjct: 61 MEAINSIELLMPALQPAELWQESGRWEAYGPELMRLKDRHDRDFALGATHEEVITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y+ M+ + Sbjct: 121 EIKSYKKLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHSSRESLDATYDDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL + A++G IGG +HEF+VL++ GE + S+ +D+ Sbjct: 181 YSNIFTRLGLNFRAVIADAGTIGGKGTHEFMVLSEIGEDTIAY----------SDTSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVH 263 I + +V ++TAP D+ Sbjct: 231 ANIEMAEVVVEYTAPTTPMKDIE 253 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 96/167 (57%), Gaps = 1/167 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GT YS ++ATF GK MG YGIG R++AAV E D G Sbjct: 403 AEGIEVGHIFKLGTTYSEKLNATFLDEQGKAKPYIMGCYGIGVSRILAAVAEHFQDENGF 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +AP+ + L+ + A D+ +++Y L +V +D+ E+ G +FA ADL+ Sbjct: 463 VWPAQLAPYDLQLVPVNAKDEAQVQLADELYGVLKSYRYEVLYDNRAERAGVKFADADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G P+++ VG K S+ VE+K R TG + + EEV++ + F N Sbjct: 523 GLPVRITVGKK-ASEGLVEVKFRSTGESAEWAKEEVVDRLNEYFRQN 568 >gi|327270906|ref|XP_003220229.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Anolis carolinensis] Length = 472 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 153/428 (35%), Positives = 235/428 (54%), Gaps = 37/428 (8%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 S +LML G+I S G Y ++P +A++ + +I +E G +M++PTL SA LW Sbjct: 67 SQRLMLLGGLICPASPGCYHYMPYAVRAMEKLIKVIDQEMQAIGGQKMNMPTLCSAKLWR 126 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH-IKSYRNLPFTFYQIQLKFR 140 +SGR++ GKE+LR+ DR+ + GPTHEE +TD+ S SY+ LP YQ+ KFR Sbjct: 127 DSGRWELMGKELLRMKDRHGQEYCLGPTHEEAITDLIASQGCLSYKQLPLLLYQVTRKFR 186 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 DE +PRFG++R REF MKD Y+FD + E + +Y + +Y IF+ LGL+ I ++A +G Sbjct: 187 DEPKPRFGLLRGREFYMKDMYTFDASKEAALQTYECVSNAYSNIFNNLGLQFIKVQAATG 246 Query: 201 PIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS 260 IGG +SHEF + A+ GE Q+ + N DF A Sbjct: 247 SIGGTMSHEFQLPAEVGEDQL----------MMCANCDFS----------------ANVE 280 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 +++ ++ + + K + ++GIEVGH F+ GTKYS +AT A K +MG YG+G Sbjct: 281 TMNSNEMGCPVCKGKLIESKGIEVGHTFFLGTKYSSVFNATVHTAQNKPVSAEMGCYGLG 340 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA--CEKIYARLS----K 374 R++AA IE I WPD +AP+++ LI K + A E++Y +S + Sbjct: 341 VSRILAASIEVLSTEDAIRWPDLIAPYQVCLIPPKKGSNEEKGAILLEELYDFISETVPR 400 Query: 375 VGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD--SKVEIKHRLTGIREDMSL 431 + ++ DD IG + A+ LG+P VI+G K V D S E+ ++ TG ++ Sbjct: 401 LKNEMVLDDRTRLTIGKRLKDANKLGYPY-VIIGGKKVFDKPSLFELHNQNTGEILFLTK 459 Query: 432 EEVINYAS 439 E +I+ S Sbjct: 460 EAIIDLLS 467 >gi|254669934|emb|CBA04522.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha153] Length = 570 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 128/275 (46%), Positives = 179/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A VH N K +SL E Sbjct: 237 PTLPLKG---ERAAAQAELVKVHTPNVKTIESLVE 268 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRDNEAQAIAIGEIV 561 >gi|330959255|gb|EGH59515.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 571 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 131/303 (43%), Positives = 189/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S +D+ Sbjct: 181 YSNIFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSN----------GSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I V + T+ AAT ++ +L D+ N + A+ +E + LP+ Sbjct: 231 ANIEKAEAVPRETSRPAATEEL---RLVDT--PNAKTIAQLVE---------GFGLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 109/191 (57%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ R+A +++YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDRLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 498 TGAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINYASHR 441 + +V+++ R Sbjct: 558 VADVLSFIQGR 568 >gi|308068985|ref|YP_003870590.1| Prolyl-tRNA synthetase class II (Proline--tRNA ligase class II) [Paenibacillus polymyxa E681] gi|305858264|gb|ADM70052.1| Prolyl-tRNA synthetase class II (Proline--tRNA ligase class II) [Paenibacillus polymyxa E681] Length = 579 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 161/226 (71%), Gaps = 2/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ L L+E P +AE+ SH+LMLR G I Q + G+Y+++PLG++ L V I+R+E Sbjct: 1 MRQSQLLLTTLREAPAEAEVISHQLMLRGGFIRQLAAGMYTYMPLGRRVLRKVEQIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ +LW ESGRYD YG E++RL DR+D+ GPTHEEV+T + R+ Sbjct: 61 MDRAGAGELLMPVLQPTELWQESGRYDVYGPELMRLQDRHDREFALGPTHEEVITSLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP T YQIQ KFRDE RPRFG++RSREFLMKDAYSFD EG H+Y MF + Sbjct: 121 EVNSYRKLPVTLYQIQTKFRDERRPRFGLLRSREFLMKDAYSFDAHWEGLDHTYWTMFRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGE-TQVFCS 224 Y RIF R GL + A++G IGG+ +HEF+ LAD GE T V C+ Sbjct: 181 YHRIFTRCGLYFRAVEADAGAIGGEGETHEFMALADIGEDTIVACT 226 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/154 (39%), Positives = 98/154 (63%), Gaps = 1/154 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIE+GH+F GTKYS + ATF A G + + MG YGIG R+++A++E +HD G+IW Sbjct: 419 GIEIGHVFKLGTKYSEKLGATFLDAFGTEQAMIMGCYGIGVSRILSAIVEQNHDQNGMIW 478 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P ++APF++ +I I D++ EK+Y +L G +V DD E+ G +F +DL+G Sbjct: 479 PYALAPFQVHIIPISVKDRLQMQIAEKLYNQLQDRGVEVLLDDREERPGVKFKDSDLVGI 538 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 P++++VG K KVE+ R + +E + +E++ Sbjct: 539 PVRIVVG-KDAEHGKVELVERKSCNKETIHIEDI 571 >gi|228940907|ref|ZP_04103466.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973836|ref|ZP_04134412.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980425|ref|ZP_04140735.1| Prolyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228779245|gb|EEM27502.1| Prolyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228785861|gb|EEM33864.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818743|gb|EEM64809.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941586|gb|AEA17482.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 566 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 167/253 (66%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V+ +T Sbjct: 231 ANIEMAPVVDTYT 243 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQIYITN 563 >gi|313668476|ref|YP_004048760.1| prolyl-tRNA synthetase [Neisseria lactamica ST-640] gi|313005938|emb|CBN87395.1| prolyl-tRNA synthetase [Neisseria lactamica 020-06] Length = 570 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 176/273 (64%), Gaps = 9/273 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSL 271 + L + A A VH N K DSL Sbjct: 237 PTLPLKG---ERAAAQAELVKVHTPNVKTIDSL 266 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWAKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRENEAQAVAIGEIV 561 >gi|325266259|ref|ZP_08132938.1| proline--tRNA ligase [Kingella denitrificans ATCC 33394] gi|324982221|gb|EGC17854.1| proline--tRNA ligase [Kingella denitrificans ATCC 33394] Length = 569 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 118/230 (51%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A + SHKLMLR G+I ++ G+Y+W+P+G + L V I+REE Sbjct: 1 MKASQFFISTLKEAPAEAALPSHKLMLRAGLIKANASGLYTWMPMGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q ADLW ESGR+D YG E+LR+ DR+D + PT EE++TDI R Sbjct: 61 MNRAGAIELLMPVIQPADLWKESGRWDFYGDELLRITDRHDNEFCFSPTCEEMVTDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EVNSYKQLPKNFYHIQTKFRDERRPRFGVMRAREFVMKDAYSFHADFASLQETYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y R+F RLGL P+ A++G IGG SHEF VLA++GE V D D+ Sbjct: 181 YCRVFGRLGLNFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDASDY 229 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 65/145 (44%), Positives = 91/145 (62%), Gaps = 3/145 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KYS ++A+F +GK ++MG YGIG RVVAA IE +HD +GI Sbjct: 404 ARGIEVGHVFQLRDKYSAALNASFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNHDERGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW D++APF ++ N K + V R+A +KIYA L G DV DD E+ G A ++ Sbjct: 464 IWTDTMAPFAAVIVPMNYKKSEAV-REAADKIYADLLAAGVDVLLDDRDERAGVLLADSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 LLG P ++++G + + + VE R Sbjct: 523 LLGIPHRIVIGDRGLKEGNVEYARR 547 >gi|313893443|ref|ZP_07827015.1| proline--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] gi|313442084|gb|EFR60504.1| proline--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] Length = 572 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 161/226 (71%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M +K + P L+E P DA++ S +LMLR G + + + G+YS+LPLG +++ + AI+REE Sbjct: 1 MLATKLYAPTLREVPSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWRSIKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDNEFCLGPTHEEIITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKDAYSFD+ G + SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDAYSFDVDEAGLEESYKSMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y RIF+R GL P+ A+SG IGG +HEF+ +A+ GE V+C+K Sbjct: 181 YTRIFNRCGLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTK 226 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/253 (33%), Positives = 126/253 (49%), Gaps = 24/253 (9%) Query: 201 PIGGDLSHEFIVLADTG--ETQVFCS----KDFMDFPI-PSENTDFDDII--SLNSIVEQ 251 P+G + EF ++ D ET C KD I P + + +DII + I + Sbjct: 334 PVGLQQTEEFTIVVDESVMETYNVCGGANKKDAHYVNINPKRDFNVEDIIVAPIRLITKD 393 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P S H A+GIEVG +F GTKYS + ATF +G+ + Sbjct: 394 DVCPTCGGSLEH---------------AKGIEVGQVFKLGTKYSEALQATFLDQNGRPNP 438 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + MG YGIG R +AA IE HD GIIWP S+APF+ ++ I A D+ E IY+ Sbjct: 439 MIMGCYGIGVSRTLAAAIEQYHDENGIIWPRSIAPFEAVIVPINAKDEALMSTSETIYSA 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L + G DV DD ++ G +F ADL+G+PL++ V + +++VEI+ R TG ++ Sbjct: 499 LQEAGVDVLLDDRKDRAGVKFKDADLIGYPLRITVSKNTLENNEVEIQIRKTGEALSCAI 558 Query: 432 EEVINYASHRFSN 444 + V + N Sbjct: 559 DSVATKVTELLQN 571 >gi|210633121|ref|ZP_03297688.1| hypothetical protein COLSTE_01601 [Collinsella stercoris DSM 13279] gi|210159275|gb|EEA90246.1| hypothetical protein COLSTE_01601 [Collinsella stercoris DSM 13279] Length = 569 Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 112/224 (50%), Positives = 163/224 (72%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P L+E+P +AE+ASH+LMLR G+I + + G+YS+LPL ++L + I+R+E Sbjct: 1 MKMSKLYAPTLKEDPAEAELASHRLMLRAGLIRKQAAGLYSYLPLAWRSLRKIEDIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + A +W ESGRY++YG E++R+ DR+D+ + GPTHEE +TD+ ++ Sbjct: 61 MDAAGAQELLMPIMVDAQVWRESGRYNAYGPELMRIDDRHDREFVLGPTHEETVTDLIKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF+ T E + +Y++M + Sbjct: 121 ELKSYKQLPVNLYQIQDKFRDEMRPRFGLMRGREFIMKDGYSFNATQESLQETYDEMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y I R GLK++P+ A+SG IGGD S EF+ LAD GE V+C Sbjct: 181 YANICERCGLKALPVVADSGQIGGDTSVEFMALADAGEAALVYC 224 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 99/158 (62%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 ARGIEV +F GTKYS M ATF +G++ MG YG+G R +AA +E HDG Sbjct: 399 AGARGIEVSQVFQLGTKYSEAMGATFADENGEEKPFLMGCYGVGVSRTLAASVEQHHDGH 458 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 GIIWP S+AP+++S++ + + C + C ++ L G +V DD + G +FA D Sbjct: 459 GIIWPVSIAPYEVSIMPLDPTIEECAEVCARLTDELCAAGIEVIVDDRDIRPGVKFADND 518 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L+GFP Q+++G + + + VE+K R TG RED++++EV Sbjct: 519 LMGFPYQIVLGKRGLKNGTVELKDRATGEREDVAIDEV 556 >gi|88810462|ref|ZP_01125719.1| prolyl-tRNA synthetase [Nitrococcus mobilis Nb-231] gi|88792092|gb|EAR23202.1| prolyl-tRNA synthetase [Nitrococcus mobilis Nb-231] Length = 569 Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 120/225 (53%), Positives = 159/225 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + L +E P DAEI SH+LMLR G+I + G+Y+WLPLG + L NV ++REE Sbjct: 1 MRVTGFPLFTSREIPADAEIISHQLMLRAGLIARLGAGLYTWLPLGLRVLRNVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G++E+ +P +Q A+LW ESGR++ YG E+LRL DR+ + +GPTHEEV+TD+ R Sbjct: 61 MDRIGSLEVLMPAVQPAELWQESGRWEQYGPELLRLKDRHAREFCFGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP T+YQIQ KFRDE+RPRFGVMR+REFLMKDAYSF L + +Y M + Sbjct: 121 EIHSYRQLPVTYYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLDQASLEATYRAMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF RL L +RA++G IGG +S EF VLAD+GE + + Sbjct: 181 YSRIFQRLNLDFRAVRADTGAIGGSVSEEFHVLADSGEDAIAVCR 225 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F G KYS M A G + MG YGIG RVVAA IE +HD +GII Sbjct: 403 RGIEVGHVFQLGAKYSESMDARVLNEHGDQVPMIMGCYGIGVSRVVAAAIEQNHDERGII 462 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +APF++++++I AH + + E+++ L G + WDD + G +FA +L+ Sbjct: 463 WPTPLAPFQVAIVSINAHRSEAVHNEAERLHEALGAAGLEPLWDDREARPGVKFADMELI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P ++++ + +S VE + R + E V+ + Sbjct: 523 GIPHRLVISDRGLSAGTVEYRGRSEPTSRHLPCERVVEF 561 >gi|331007686|ref|ZP_08330821.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC1989] gi|330418506|gb|EGG93037.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC1989] Length = 579 Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 120/247 (48%), Positives = 168/247 (68%), Gaps = 4/247 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR G++ + + G+Y+W+PLG + L V IIREE Sbjct: 1 MRASRFLLSTSKETPADAEVISHQLMLRAGLVRKLASGLYTWMPLGLRVLRKVEHIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA E+ +P +Q A+LW ESGR+ YG E+LR+ DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNKSGAQEVLMPVVQPAELWQESGRWQEYGPELLRIKDRHQREFCLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MRSREF+MKDAYSF + + +Y+ M + Sbjct: 121 DVNSYKQLPANFYQIQTKFRDEIRPRFGIMRSREFIMKDAYSFHIDQASLQDTYDVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL P+ A++G IGG SHEF VLA +GE + S D D+ + N + Sbjct: 181 YCNIFDRIGLDYRPVIADNGSIGGSGSHEFHVLASSGEDDIAFS-DGSDY---AANVEMA 236 Query: 241 DIISLNS 247 + I N+ Sbjct: 237 EAIETNT 243 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 71/181 (39%), Positives = 105/181 (58%), Gaps = 4/181 (2%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N + D P K RGIEVGHIF GTKYS M+AT +GK + MG YG Sbjct: 393 DIRNVMVGDPSPCGKGTLDIKRGIEVGHIFQLGTKYSESMNATVLDQNGKAQAITMGCYG 452 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC-RDACEKIYARLSKVGC 377 IG RVVAA IE +HD GIIWP ++APF+++LI I AH + C+ +Y L G Sbjct: 453 IGVTRVVAAAIEQNHDDNGIIWPSALAPFQVALIPINAHKSAAVSEKCDVLYKELQAAGY 512 Query: 378 DVFW-DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV + D+ ++G A +L+G P +++VG + + + +VE K R ++++ V++ Sbjct: 513 DVIYMDEPKARLGVMLADTELVGIPHRIVVGDRGLENGQVEYKGRRDSEKQEIDAGSVVD 572 Query: 437 Y 437 + Sbjct: 573 F 573 >gi|312962836|ref|ZP_07777323.1| prolyl-tRNA synthetase [Pseudomonas fluorescens WH6] gi|311282863|gb|EFQ61457.1| prolyl-tRNA synthetase [Pseudomonas fluorescens WH6] Length = 571 Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 125/277 (45%), Positives = 175/277 (63%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G K + V AI+REE Sbjct: 1 MRTSQYLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLKVMRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G++E+ +P+ Q A+LW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGSLEVLMPSTQPAELWQESGRWEEYGPELLRFKDRHGRDFCAGPTHEEVITDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQVTYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--DF----------- 227 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + S D+ Sbjct: 181 YCNVFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANIEKAEAIP 240 Query: 228 --MDFPIPSEN---TDFDDIISLNSIVEQWTAPYAAT 259 P P+E D D ++ ++VE++ P T Sbjct: 241 RETSRPAPAEELRLVDTPDTKTIAALVEKFNLPIEKT 277 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 110/192 (57%), Gaps = 4/192 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF G KYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGNKYSKAMKCEVLGENGKPITL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE ++D KGIIW D++APF+++L+ ++ + R+A +K+YA L Sbjct: 438 DMGCYGIGVSRVVAAAIEQNNDDKGIIWSDALAPFQVALVPLRYETEQVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + ++D +E K R + + Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLADGNLEYKSRTEAEAQPLP 557 Query: 431 LEEVINYASHRF 442 + +V+++ R Sbjct: 558 VADVLSFLQARI 569 >gi|73956414|ref|XP_546694.2| PREDICTED: similar to prolyl-tRNA synthetase (mitochondrial)(putative) [Canis familiaris] Length = 632 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 150/433 (34%), Positives = 230/433 (53%), Gaps = 35/433 (8%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D S +LM + G+I+ S G Y LP +A++ + +I +E G ++++P+L Sbjct: 222 DLTCKSQRLMQQVGLIYPASPGCYHLLPYTVRAMEKLQRVIDQEMQAIGGQKVNMPSLSP 281 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH-IKSYRNLPFTFYQI 135 A+LW + R+D GKE+LRL DR+ K GPTHEE +T + S SYR LPF YQ+ Sbjct: 282 AELWRATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAVTALVASQKTLSYRQLPFLLYQV 341 Query: 136 QLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 KFRDE RPRFG++R REF MKD Y+FD +PE ++ +Y + +Y +F RLGL+ I + Sbjct: 342 TRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAARQTYGLVCGAYSSLFRRLGLRCIRV 401 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 +A+ G IGG SHEF + AD GE + F P + + + + + Q P Sbjct: 402 QADVGSIGGTASHEFQLPADIGEDR------FAVCPSCGFSANMETL-----RLSQTDCP 450 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 ++ ARGIEVGH FY GTKYS +A F A G+ +MG Sbjct: 451 AC---------------QSPLTEARGIEVGHTFYLGTKYSSIFNAQFTDAQGRPCPAEMG 495 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACEKIYARLS 373 YG+G R++AA IE I WP +AP+++ LI K + ++V + +Y ++ Sbjct: 496 CYGLGVTRILAAAIEVLSTEDCIRWPGLLAPYQVCLIPPKKGSKEEVATELTGHLYDLIT 555 Query: 374 ----KVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKFVSD-SKVEIKHRLTGIRE 427 ++ +V DD + IG++ A+ G+P +I G + + D + E+ + TG Sbjct: 556 EAVPQLRGEVLLDDRTHRTIGNRLKDANKFGYPFVIIAGKRALEDPAHFEVWSQNTGEVV 615 Query: 428 DMSLEEVINYASH 440 ++ E V + S Sbjct: 616 FLTREGVTEFLSQ 628 >gi|269213497|ref|ZP_06158007.1| proline--tRNA ligase [Neisseria cinerea ATCC 14685] gi|269146261|gb|EEZ72679.1| proline--tRNA ligase [Neisseria cinerea ATCC 14685] Length = 594 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 127/273 (46%), Positives = 178/273 (65%), Gaps = 9/273 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 25 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 84 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 85 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 144 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 145 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 204 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 205 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANVELA 260 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSL 271 + L + A + VH N K DSL Sbjct: 261 PTLPLKG---ERAAAQVELTKVHTPNVKTIDSL 290 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 96/159 (60%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 428 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 487 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 488 IWTKAMAPFEVVIVPMNYKKSDAV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 546 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + + + E++ Sbjct: 547 LLGIPHRIVIGDRALKEGNVEYAERRDNEAQSVPIGEIV 585 >gi|15677205|ref|NP_274358.1| prolyl-tRNA synthetase [Neisseria meningitidis MC58] gi|81857571|sp|Q9JZ14|SYP_NEIMB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|7226583|gb|AAF41714.1| prolyl-tRNA synthetase [Neisseria meningitidis MC58] gi|325134423|gb|EGC57068.1| prolyl-tRNA synthetase [Neisseria meningitidis M13399] gi|325200038|gb|ADY95493.1| prolyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 570 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 176/273 (64%), Gaps = 9/273 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSL 271 + L + A A VH N K DSL Sbjct: 237 PTLPLKG---ERAAAQAELVKVHTPNVKTIDSL 266 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIV 561 >gi|30249296|ref|NP_841366.1| prolyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] gi|81838727|sp|Q82UZ8|SYP_NITEU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|30180615|emb|CAD85228.1| Prolyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] Length = 568 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 160/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL L+E P +AE+ SH+LMLR G+I + G+Y+W+PLG + L + IIREE Sbjct: 1 MRVSQFFLATLKEAPAEAELISHRLMLRAGLIKRLGSGLYTWMPLGLRILHKIEHIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GA+E+ +P + A+LW E+GR+D +G +ML++ DR+ +GPTHEEV+ DI R Sbjct: 61 MNNSGALELLMPAVHPAELWQETGRWDVFGPQMLKIQDRHKHDFCFGPTHEEVIVDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + + +Y M + Sbjct: 121 EIKSYRQLPINFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHADVDSLEQTYRLMQET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF R+GLK + A++G IGG SHEF VLAD+GE + FC Sbjct: 181 YSRIFTRIGLKFRAVAADTGAIGGSGSHEFHVLADSGEDAIAFC 224 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 104/182 (57%), Gaps = 3/182 (1%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K V RGIEVGH+F TKYS M AT+ G+ ++MG YG Sbjct: 382 DIRNIVAGDPSPDGKGVLEICRGIEVGHVFQLRTKYSEKMKATYLDESGQTRIMEMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGC 377 IG R+VAA IE ++D +GII+P ++APF++S+I + H Q R EK+Y G Sbjct: 442 IGVSRIVAAAIEQNYDERGIIFPQTIAPFQLSIIPVGYHKSQQVRTEAEKLYQACRSAGI 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G FA +L+G P ++++G + + + VE + RL + +SL E + Sbjct: 502 EVLLDDREERPGVMFADQELIGIPHRIVIGERNLREGMVEYQGRLDKTPQMLSLSEAASI 561 Query: 438 AS 439 S Sbjct: 562 IS 563 >gi|75760863|ref|ZP_00740877.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218898971|ref|YP_002447382.1| prolyl-tRNA synthetase [Bacillus cereus G9842] gi|228902322|ref|ZP_04066479.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228966764|ref|ZP_04127808.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|226731427|sp|B7IUH7|SYP_BACC2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|74491647|gb|EAO54849.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218543850|gb|ACK96244.1| prolyl-tRNA synthetase [Bacillus cereus G9842] gi|228792863|gb|EEM40421.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228857291|gb|EEN01794.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 566 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 123/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEKGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|332247927|ref|XP_003273115.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial [Nomascus leucogenys] Length = 475 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 144/412 (34%), Positives = 219/412 (53%), Gaps = 36/412 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 LQ+ D S +LML+ G+I+ S G Y LP +A++ + +I +E G +++ Sbjct: 59 LQDKFDDLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVN 118 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLP 129 +P+L A+LW + R+D GKE+LRL DR+ K GPTHEE +T + S K SY+ LP Sbjct: 119 MPSLSPAELWQATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAITALIASQKKLSYKQLP 178 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F+RLG Sbjct: 179 FLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNRLG 238 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDFDDIISLNSI 248 L + ++A+ G IGG +SHEF + D GE ++ C + F E DF Sbjct: 239 LPFVKVQADVGTIGGTVSHEFQLPVDIGEDRLAICPR--CSFSANMETLDFS-------- 288 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 Q P + +GIEVGH FY GTKYS +A F GK Sbjct: 289 --QMNCPAC---------------QGPLTKTKGIEVGHTFYLGTKYSSIFNAQFTNVYGK 331 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACE 366 +MG YG+G R++AA IE + WP +AP++ LI K + ++ + Sbjct: 332 PTLAEMGCYGLGVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEEAASELIG 391 Query: 367 KIYARLS----KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 ++Y ++ ++ +V DD IG++ A+ G+P +I G + + D Sbjct: 392 QLYDHITEAVPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALED 443 >gi|229047505|ref|ZP_04193095.1| Prolyl-tRNA synthetase [Bacillus cereus AH676] gi|229081074|ref|ZP_04213584.1| Prolyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|229111290|ref|ZP_04240843.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|229191988|ref|ZP_04318958.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228591539|gb|EEK49388.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228672066|gb|EEL27357.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228702118|gb|EEL54594.1| Prolyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228723752|gb|EEL75107.1| Prolyl-tRNA synthetase [Bacillus cereus AH676] Length = 566 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|83647457|ref|YP_435892.1| prolyl-tRNA synthetase [Hahella chejuensis KCTC 2396] gi|114152199|sp|Q2SD07|SYP_HAHCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|83635500|gb|ABC31467.1| prolyl-tRNA synthetase [Hahella chejuensis KCTC 2396] Length = 574 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 122/226 (53%), Positives = 166/226 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + L+E P DAE+ SH+LMLR GMI + + G+Y+WLPLG + L V I+REE Sbjct: 1 MRASRYLIATLKETPADAEVISHQLMLRAGMIRKLAAGLYTWLPLGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ +P +Q A+LW+ESGR++ YG E+LR+ DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDRSGAQEVLMPAVQPAELWIESGRWEQYGGELLRIHDRHNRDFCVGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ+KFRDE RPRFG+MR+REFLMKDAYSF + E +Y M+ + Sbjct: 121 ELKSYKQLPANFYQIQMKFRDERRPRFGIMRAREFLMKDAYSFHVNQESLDETYMVMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL P++A+SG IGG SHEF VLA++GE + S + Sbjct: 181 YTRIFTRFGLDFRPVQADSGSIGGSSSHEFHVLANSGEDLIAFSTE 226 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 79/187 (42%), Positives = 114/187 (60%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T+D+ N D P+ K V +GIEVGH+F G KYS M+AT +GK +QMG Sbjct: 386 TADLRNVVEGDLSPDGKGVLVLKKGIEVGHVFKLGDKYSSAMNATVLDENGKATVMQMGC 445 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG RVVAA IE HD KGIIWPD++APF+++L+ + H V R+ E +YA L + Sbjct: 446 YGIGVSRVVAAAIEQGHDDKGIIWPDALAPFEVALVPLNMHKSDVVREKAESLYAELLQA 505 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G +FA +L+G P +V++ + +++ KVE K R DM+++ V+ Sbjct: 506 GVDVLLDDRNERPGVKFAEMELIGIPHRVVISDRGLAEGKVEYKGRRDTDSTDMTVDTVV 565 Query: 436 NYASHRF 442 N+ + Sbjct: 566 NFIKEKL 572 >gi|319638108|ref|ZP_07992872.1| prolyl-tRNA synthetase [Neisseria mucosa C102] gi|317400753|gb|EFV81410.1| prolyl-tRNA synthetase [Neisseria mucosa C102] Length = 570 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 127/275 (46%), Positives = 179/275 (65%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V I+REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EVNSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A + + VH N K +SL E Sbjct: 237 PTLPLKG---ERAAAQSELTKVHTPNVKTIESLVE 268 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYAKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDAV-REAADKIYAGLLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ EV+ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRDNQAQAVAVSEVV 561 >gi|253995828|ref|YP_003047892.1| prolyl-tRNA synthetase [Methylotenera mobilis JLW8] gi|253982507|gb|ACT47365.1| prolyl-tRNA synthetase [Methylotenera mobilis JLW8] Length = 573 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 120/260 (46%), Positives = 171/260 (65%), Gaps = 12/260 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F +E P +AE+ SH LM+R G+I + G+YSW+PLG + L V ++REE Sbjct: 1 MRASQFFFNTQKEAPNEAELQSHILMVRAGLIKRLGSGLYSWMPLGLRVLRKVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q +LW E+GR+ +G +ML++ DR+++ +GPTHEEV+TDI R Sbjct: 61 MNNAGALELLMPAVQPKELWEETGRWAVFGPQMLKIQDRHEREFCFGPTHEEVITDIARK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EIRSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFMMKDAYSFHTDFASLEQTYDTMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y +F RLGLK ++A++G IGGD SHEF VLAD+GE + +C E +DF Sbjct: 181 YSNVFTRLGLKFRAVKADTGAIGGDGSHEFHVLADSGEDGLAYC-----------ETSDF 229 Query: 240 DDIISLNSIVEQWTAPYAAT 259 + L + T+ AA Sbjct: 230 AANVELAEAIPASTSRSAAA 249 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 108/182 (59%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D+ P+ K V + RGIEVGHIF TKYS MSAT+ +G+ ++MG Sbjct: 387 VADIRNVVAGDASPDGKGVLSLCRGIEVGHIFQLRTKYSEAMSATYLDENGQTQVMEMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +D +GII+P S+APF++ + I + + A +K++ L Sbjct: 447 YGIGVSRIVGAAIEQGNDERGIIFPKSMAPFEVVICAIGYDKSEAVQAATKKLHDELQAA 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G FA ADL+G P ++++G + +++ VE K R + ++L V+ Sbjct: 507 GVDVLLDDRGERPGVMFAEADLMGIPHRLVIGERGLNEGNVEYKARTQADAQSVALASVV 566 Query: 436 NY 437 + Sbjct: 567 EF 568 >gi|70728636|ref|YP_258385.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] gi|114152231|sp|Q4KH98|SYP_PSEF5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|68342935|gb|AAY90541.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] Length = 571 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 125/277 (45%), Positives = 175/277 (63%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V AI+REE Sbjct: 1 MRTSQYLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P+ Q A+LW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSTQPAELWQESGRWEEYGPELLRFKDRHGRDFCAGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQVTYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--DF----------- 227 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + S D+ Sbjct: 181 YCNVFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANIEKAEAVP 240 Query: 228 --MDFPIPSEN---TDFDDIISLNSIVEQWTAPYAAT 259 P P+E D D ++ ++VE++ P T Sbjct: 241 RETSRPAPAEELRLVDTPDTKTIAALVEKFNLPIEKT 277 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 68/192 (35%), Positives = 110/192 (57%), Gaps = 4/192 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF G KYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGNKYSKAMKCEVLGENGKPVTL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 +MG YGIG RVVAA IE ++D GIIW D++APF+I+L+ ++ + R+A +K+Y+ L Sbjct: 438 EMGCYGIGVSRVVAAAIEQNNDANGIIWSDTLAPFQIALVPLRYETEQVREATDKLYSEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + + Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTEAEAQALP 557 Query: 431 LEEVINYASHRF 442 + +V+++ R Sbjct: 558 VADVLSFLQARI 569 >gi|218235963|ref|YP_002368620.1| prolyl-tRNA synthetase [Bacillus cereus B4264] gi|226731428|sp|B7HDU2|SYP_BACC4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218163920|gb|ACK63912.1| proline--tRNA ligase [Bacillus cereus B4264] Length = 566 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++++EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVNVEELQTYIAN 563 >gi|316984142|gb|EFV63120.1| prolyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 599 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 176/273 (64%), Gaps = 9/273 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 265 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSL 271 + L + A A VH N K DSL Sbjct: 266 PTLPLKG---ERAAAQAELVKVHTPNVKTIDSL 295 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 433 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 492 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 493 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 551 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 552 LLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIV 590 >gi|297617181|ref|YP_003702340.1| prolyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297145018|gb|ADI01775.1| prolyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 567 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 114/224 (50%), Positives = 160/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F P L+E+P +AE SH+L+ R GM+ + + GIY++LPLG + + + I+REE Sbjct: 1 MKASELFFPTLREDPAEAETVSHRLLFRAGMVRKTAAGIYTYLPLGFRVIKKIMNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q +LW +SGR++ YG EM RL DR+ + GPTHEEV+TD+ Sbjct: 61 MDRAGGQEVGLPIIQPRELWAQSGRWEVYGDEMFRLKDRHQRDFCLGPTHEEVITDVVNH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP YQIQ K+RDE+RPRFG++R REF+MKD YSFD+ G + SY KM+ + Sbjct: 121 EVHSYRDLPLLLYQIQNKYRDEIRPRFGLLRGREFIMKDLYSFDVDEAGLEVSYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y R+F RLGL+ + A+SG IGG++SHEFIVLA TGE+ VFC Sbjct: 181 YCRVFERLGLQYRVVEADSGAIGGNVSHEFIVLAPTGESVIVFC 224 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 99/167 (59%), Gaps = 3/167 (1%) Query: 258 ATSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A D+ N + D P E K + RGIE GHIF GTKYS M ATF +GK+ + M Sbjct: 377 AFCDLRNAEEGDICPVCREGKLKATRGIETGHIFKLGTKYSGKMGATFLDENGKERLMVM 436 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R +AA +E +HD GIIWP ++AP++I ++ + + D + K+Y L K Sbjct: 437 GCYGIGISRTMAAAVEQNHDENGIIWPLAIAPYQIIIVPVNSKDGQQMEIGMKLYHELVK 496 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +V DD ++ G +F ADL+G P+++ +G K + +VEIK R Sbjct: 497 QGYEVIIDDRDQRAGVKFKDADLIGVPVRITIGPKLLKAGQVEIKKR 543 >gi|296113641|ref|YP_003627579.1| prolyl-tRNA synthetase [Moraxella catarrhalis RH4] gi|295921335|gb|ADG61686.1| prolyl-tRNA synthetase [Moraxella catarrhalis RH4] gi|326568678|gb|EGE18749.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC7] Length = 572 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 126/264 (47%), Positives = 172/264 (65%), Gaps = 12/264 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LMLR G+I + + G+Y W+P+G + L V I+REE Sbjct: 1 MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ +P Q +LW ESGR++ YG E+LR DR+ + + GPTHEEV+TDI R+ Sbjct: 61 MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKDRHSRDFVLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP TFYQIQ KFRDE+RPRFGVMR+REF MKDAYSF + E ++Y M+ + Sbjct: 121 ELKSYKQLPITFYQIQTKFRDEIRPRFGVMRAREFTMKDAYSFHIDKESLANTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + S D +DF Sbjct: 181 YNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLADSGEDDIAFSSD----------SDFA 230 Query: 241 DIISLNSIV--EQWTAPYAATSDV 262 I L V ++ AP A +DV Sbjct: 231 ANIELAEAVCYDKRAAPTQARTDV 254 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 108/183 (59%), Gaps = 8/183 (4%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K V + RGIEVGHIF G KYS ++ + G +GK + MG YG Sbjct: 387 DIRNVVDGDPSPDGKGVISIKRGIEVGHIFQLGDKYSKALNCSVLGKEGKPVTLMMGCYG 446 Query: 319 IGAMRVVAAVIESSHDGKGIIW------PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 IG R++AA IE +HD GIIW DS+APF ++++ +K+ D + +Y L Sbjct: 447 IGVSRIIAAAIEQNHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTL 506 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G +V DD E+ G +FA +L+G P +++V + ++++K E +R TG ++ +SL+ Sbjct: 507 KARGINVLLDDRDERAGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLD 566 Query: 433 EVI 435 E++ Sbjct: 567 ELL 569 >gi|229152018|ref|ZP_04280213.1| Prolyl-tRNA synthetase [Bacillus cereus m1550] gi|228631367|gb|EEK88001.1| Prolyl-tRNA synthetase [Bacillus cereus m1550] Length = 566 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++++EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVNVEELQTYIAN 563 >gi|71736091|ref|YP_275923.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487021|ref|ZP_05641062.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298488219|ref|ZP_07006255.1| Prolyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|114152230|sp|Q48FB4|SYP_PSE14 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71556644|gb|AAZ35855.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157277|gb|EFH98361.1| Prolyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320323063|gb|EFW79152.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076] gi|320329665|gb|EFW85654.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] gi|330892229|gb|EGH24890.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020] gi|330988958|gb|EGH87061.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009335|gb|EGH89391.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 571 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 131/303 (43%), Positives = 190/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + + S+ +D+ Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDI----------VFSDGSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I V + A AAT ++ +L D+ N + A+ +E + LP+ Sbjct: 231 ANIEKAEAVPREKARPAATEEL---RLIDT--PNAKTIAQLVE---------GFDLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 4/187 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINY 437 + +V+++ Sbjct: 558 VADVLSF 564 >gi|228960035|ref|ZP_04121699.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799551|gb|EEM46504.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 566 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKAQLLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|228954095|ref|ZP_04116124.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229071317|ref|ZP_04204540.1| Prolyl-tRNA synthetase [Bacillus cereus F65185] gi|228711771|gb|EEL63723.1| Prolyl-tRNA synthetase [Bacillus cereus F65185] gi|228805661|gb|EEM52251.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 566 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFTRCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|326566943|gb|EGE17081.1| prolyl-tRNA synthetase [Moraxella catarrhalis 12P80B1] Length = 572 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 126/264 (47%), Positives = 172/264 (65%), Gaps = 12/264 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LMLR G+I + + G+Y W+P+G + L V I+REE Sbjct: 1 MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ +P Q +LW ESGR++ YG E+LR DR+ + + GPTHEEV+TDI R+ Sbjct: 61 MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKDRHSRDFVLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP TFYQIQ KFRDE+RPRFGVMR+REF MKDAYSF + E ++Y M+ + Sbjct: 121 ELKSYKQLPITFYQIQTKFRDEIRPRFGVMRAREFTMKDAYSFHIDKESLANTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + S D +DF Sbjct: 181 YNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLADSGEDDIAFSSD----------SDFA 230 Query: 241 DIISLNSIV--EQWTAPYAATSDV 262 I L V ++ AP A +DV Sbjct: 231 ANIELAEAVCYDKRAAPTQARTDV 254 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 107/183 (58%), Gaps = 8/183 (4%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ V + RGIEVGHIF G KYS ++ + G +GK + MG YG Sbjct: 387 DIRNVVDGDPSPDGNGVISIKRGIEVGHIFQLGDKYSKALNCSVLGKEGKPVTLMMGCYG 446 Query: 319 IGAMRVVAAVIESSHDGKGIIW------PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 IG R++AA IE +HD GIIW DS+APF ++++ +K+ D + +Y L Sbjct: 447 IGVSRIIAAAIEQNHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTL 506 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G +V DD E+ G +FA +L+G P +++V + ++++K E +R TG ++ +SL+ Sbjct: 507 KARGINVLLDDRDERAGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLD 566 Query: 433 EVI 435 E++ Sbjct: 567 ELL 569 >gi|326559635|gb|EGE10049.1| prolyl-tRNA synthetase [Moraxella catarrhalis 7169] gi|326560025|gb|EGE10420.1| prolyl-tRNA synthetase [Moraxella catarrhalis 46P47B1] gi|326562507|gb|EGE12824.1| prolyl-tRNA synthetase [Moraxella catarrhalis 103P14B1] gi|326567687|gb|EGE17793.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC1] gi|326574268|gb|EGE24216.1| prolyl-tRNA synthetase [Moraxella catarrhalis 101P30B1] gi|326575054|gb|EGE24983.1| prolyl-tRNA synthetase [Moraxella catarrhalis O35E] Length = 572 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 126/264 (47%), Positives = 172/264 (65%), Gaps = 12/264 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LMLR G+I + + G+Y W+P+G + L V I+REE Sbjct: 1 MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ +P Q +LW ESGR++ YG E+LR DR+ + + GPTHEEV+TDI R+ Sbjct: 61 MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKDRHSRDFVLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP TFYQIQ KFRDE+RPRFGVMR+REF MKDAYSF + E ++Y M+ + Sbjct: 121 ELKSYKQLPITFYQIQTKFRDEIRPRFGVMRAREFTMKDAYSFHIDKESLANTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + S D +DF Sbjct: 181 YNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLADSGEDDIAFSSD----------SDFA 230 Query: 241 DIISLNSIV--EQWTAPYAATSDV 262 I L V ++ AP A +DV Sbjct: 231 ANIELAEAVCYDKRAAPTQARTDV 254 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 108/183 (59%), Gaps = 8/183 (4%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K V + RGIEVGHIF G KYS ++ + G +GK + MG YG Sbjct: 387 DIRNVVDGDPSPDGKGVISIKRGIEVGHIFQLGDKYSKALNCSVLGKEGKPVTLMMGCYG 446 Query: 319 IGAMRVVAAVIESSHDGKGIIW------PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 IG R++AA IE +HD GIIW DS+APF ++++ +K+ D + +Y L Sbjct: 447 IGVSRIIAAAIEQNHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTL 506 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G +V DD E+ G +FA +L+G P +++V + ++++K E +R TG ++ +SL+ Sbjct: 507 KARGINVLLDDRDERAGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLD 566 Query: 433 EVI 435 E++ Sbjct: 567 ELL 569 >gi|319779147|ref|YP_004130060.1| Prolyl-tRNA synthetase [Taylorella equigenitalis MCE9] gi|317109171|gb|ADU91917.1| Prolyl-tRNA synthetase [Taylorella equigenitalis MCE9] Length = 582 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 121/218 (55%), Positives = 156/218 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKY + L+E P +AE+ SHK MLR GMI + GIY+++PLG K L V AI+REE Sbjct: 1 MLASKYHINTLKEAPAEAEVVSHKYMLRAGMIRKLGAGIYTYMPLGFKVLKKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW+++ R+++YG E+LR DR+ + I PT EEV+TDI + Sbjct: 61 MNRAGAIELLMPIVQPAELWMKTERWNAYGPELLRFKDRHSRDFIIQPTSEEVITDIVAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + S+R LP FY IQ KFRDE RPRFG+MR REFLMKDAYSFD T E + SY KM+ + Sbjct: 121 EVHSWRQLPLNFYHIQTKFRDERRPRFGLMRGREFLMKDAYSFDRTEEEANISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y+RIF RLGLK + A++G IGG SHEF V+A TGE Sbjct: 181 YVRIFTRLGLKFRAVNADTGSIGGSRSHEFQVIAQTGE 218 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/160 (39%), Positives = 96/160 (60%), Gaps = 1/160 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F+ G KYS + A + +GK+ +QMG YGIG R+VAA IE +HD GII Sbjct: 412 RGIEVGHVFFLGDKYSSKLRAVYLDENGKEAVIQMGCYGIGVSRIVAAAIEQNHDENGII 471 Query: 340 WPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +AP++I + I + + ++ ++Y +L G DV DD + G F +L+ Sbjct: 472 WPLPMAPYEIVICPIGWSKSEEVKNKSLELYEQLKAEGYDVILDDRDLRTGVMFTEWELI 531 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 G P+++ VG + + D +E++ R + +SL EVINY Sbjct: 532 GVPIRITVGDRGLKDGVIEVQKRTEKEAKKLSLNEVINYV 571 >gi|311030092|ref|ZP_07708182.1| prolyl-tRNA synthetase [Bacillus sp. m3-13] Length = 561 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 116/226 (51%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S +P L+E P DAE+ SH+L+LR G I Q++ GIYS+LPLG+K L V ++REE Sbjct: 1 MKQSNMLIPTLREVPADAEVKSHQLLLRAGYIRQNTSGIYSFLPLGKKVLKKVEDVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA+E+ +P +Q+A+LW ESGR+ SYG E++RL DR+++ G THEEV+T + R Sbjct: 61 MENAGAVELLMPAMQAAELWKESGRWYSYGPELMRLNDRHNREFALGATHEEVITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP + YQIQ KFRDE RPRFG++R REFLMKDAYSF E +Y KMF + Sbjct: 121 EVKSYKKLPLSLYQIQTKFRDEKRPRFGLLRGREFLMKDAYSFHANAESLDETYEKMFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF RLGL + A+SG +GG +HEF+VL+D GE + S + Sbjct: 181 YSNIFTRLGLNFRAVIADSGAMGGKDTHEFMVLSDIGEDTIAYSTE 226 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/157 (44%), Positives = 99/157 (63%), Gaps = 1/157 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVGHIF GT+YS M A F +G++ + MG YGIG RV+AA++E HD GI Sbjct: 402 AKGIEVGHIFKLGTRYSEAMGANFLDENGRNQPMIMGCYGIGVSRVLAAIVEQYHDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +V PF + +I + ++ E+IY+ L G V DD E+ G +FA ADL+ Sbjct: 462 VWPKAVTPFDVHVIPVNIKNEAQASLAEEIYSELKNSGLAVLMDDRQERPGVKFADADLI 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P++V VG K + VE+K R TG E++S+EE+I Sbjct: 522 GLPVRVTVGKK-AEERIVEVKWRETGDMEELSVEELI 557 >gi|229129095|ref|ZP_04258068.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|229146390|ref|ZP_04274761.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|296504314|ref|YP_003666014.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|228637023|gb|EEK93482.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228654332|gb|EEL10197.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|296325366|gb|ADH08294.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 566 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|206972654|ref|ZP_03233595.1| prolyl-tRNA synthetase [Bacillus cereus AH1134] gi|206732411|gb|EDZ49592.1| prolyl-tRNA synthetase [Bacillus cereus AH1134] Length = 566 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|289628621|ref|ZP_06461575.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651507|ref|ZP_06482850.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250] gi|330868600|gb|EGH03309.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 571 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 131/303 (43%), Positives = 190/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + + S+ +D+ Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDI----------VFSDGSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I V + A AAT ++ +L D+ N + A+ +E + LP+ Sbjct: 231 ANIEKAEAVPREKARPAATEEL---RLIDT--PNAKTIAQLVE---------GFDLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 4/187 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINY 437 + +V+++ Sbjct: 558 VSDVLSF 564 >gi|326568855|gb|EGE18925.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC8] Length = 572 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 126/264 (47%), Positives = 172/264 (65%), Gaps = 12/264 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LMLR G+I + + G+Y W+P+G + L V I+REE Sbjct: 1 MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ +P Q +LW ESGR++ YG E+LR DR+ + + GPTHEEV+TDI R+ Sbjct: 61 MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKDRHSRDFVLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP TFYQIQ KFRDE+RPRFGVMR+REF MKDAYSF + E ++Y M+ + Sbjct: 121 ELKSYKQLPITFYQIQTKFRDEIRPRFGVMRAREFTMKDAYSFHIDKESLANTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + S D +DF Sbjct: 181 YNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLADSGEDDIAFSSD----------SDFA 230 Query: 241 DIISLNSIV--EQWTAPYAATSDV 262 I L V ++ AP A +DV Sbjct: 231 ANIELAEAVCYDKRAAPTQARTDV 254 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 108/183 (59%), Gaps = 8/183 (4%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K + + RGIEVGHIF G KYS ++ + G +GK + MG YG Sbjct: 387 DIRNVVDGDPSPDGKGIISIKRGIEVGHIFQLGDKYSKALNCSVLGKEGKPVTLMMGCYG 446 Query: 319 IGAMRVVAAVIESSHDGKGIIW------PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 IG R++AA IE +HD GIIW DS+APF ++++ +K+ D + +Y L Sbjct: 447 IGVSRIIAAAIEQNHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTL 506 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G +V DD E+ G +FA +L+G P +++V + ++++K E +R TG ++ +SL+ Sbjct: 507 KARGINVLLDDRDERAGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLD 566 Query: 433 EVI 435 E++ Sbjct: 567 ELL 569 >gi|169827162|ref|YP_001697320.1| prolyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41] gi|226701308|sp|B1HQZ9|SYP_LYSSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|168991650|gb|ACA39190.1| Prolyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41] Length = 568 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 120/244 (49%), Positives = 169/244 (69%), Gaps = 4/244 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE+ SHK +LR G I Q++ G+YS+LPL ++ L + IIREE Sbjct: 1 MKQSKTFIPTLREVPADAEVKSHKQLLRAGFIRQNTSGVYSYLPLAKRVLSKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+ +P+LQSA+LW ESGR++ YG E++RL DR+D+ GPTHEEV+T + R Sbjct: 61 MEAINSIELLMPSLQSAELWQESGRWEKYGPELMRLKDRHDRDFALGPTHEEVITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y+ M+ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASRESLDETYDDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL + A++G IGG +HEF+VL++ GE + S D D+ + N + Sbjct: 181 YSNIFSRLGLNYRAVIADAGSIGGKGTHEFMVLSEIGEDTIAYS-DTSDY---AANIEMA 236 Query: 241 DIIS 244 ++I+ Sbjct: 237 EVIA 240 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 92/167 (55%), Gaps = 1/167 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GT YS M+ TF GK MG YGIG R++AAV E D G Sbjct: 403 AEGIEVGHIFKLGTTYSAKMNGTFLDEQGKSQPFIMGCYGIGVSRILAAVAEHFQDENGF 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +AP+ I ++ + D+V +++Y L DV DD E+ G +FA ADL+ Sbjct: 463 TWPTQLAPYDIHVVPVNTKDEVQVALADELYGLLKSYRYDVLLDDRAERAGVKFADADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G P++V VG K ++ VE+K R TG + EEVI+ + F N Sbjct: 523 GLPVRVTVGKK-ATEGIVEVKFRQTGETFEWKKEEVIDRLNEFFRKN 568 >gi|228986962|ref|ZP_04147088.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772740|gb|EEM21180.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 566 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDESGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|160900913|ref|YP_001566495.1| prolyl-tRNA synthetase [Delftia acidovorans SPH-1] gi|226699138|sp|A9BP65|SYP_DELAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160366497|gb|ABX38110.1| prolyl-tRNA synthetase [Delftia acidovorans SPH-1] Length = 581 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 119/229 (51%), Positives = 164/229 (71%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMTRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A++W E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVEVTMPVVQPAEMWEETGRFEKMGPELLRIKDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD + ++ SY M + Sbjct: 121 ELKSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDKDRDTAQISYQTMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC-SKDF 227 Y RIF R GL+ +RA+SG IGGDLS EF V+A TGE V+C S D+ Sbjct: 181 YKRIFDRFGLQYRAVRADSGAIGGDLSEEFQVIASTGEDAIVYCPSSDY 229 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/188 (39%), Positives = 110/188 (58%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ A RGIEVGH+FY GTKYS M+ATF +GK +MG Sbjct: 393 VADLRNVVAGDKSPDGAGELAIERGIEVGHVFYLGTKYSQAMNATFLAENGKPSLFEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + + I + ++A EK++A L + Sbjct: 453 YGIGVTRLPAAAIEQNHDERGIIWPDAIAPFTVVVCPIGMDRSEPVKEAAEKLHAELLAL 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G+ FA +L+G P +V++ + + + +VE +HR M+ +V+ Sbjct: 513 GVDVILDDRGERPGAMFADWELIGVPHRVVLSDRGLKEGQVEYQHRRDTEATKMAAADVL 572 Query: 436 NYASHRFS 443 + R Sbjct: 573 GHLKQRLG 580 >gi|326572669|gb|EGE22658.1| prolyl-tRNA synthetase [Moraxella catarrhalis CO72] Length = 572 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 126/264 (47%), Positives = 172/264 (65%), Gaps = 12/264 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LMLR G+I + + G+Y W+P+G + L V I+REE Sbjct: 1 MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ +P Q +LW ESGR++ YG E+LR DR+ + + GPTHEEV+TDI R+ Sbjct: 61 MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKDRHSRDFVLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP TFYQIQ KFRDE+RPRFGVMR+REF MKDAYSF + E ++Y M+ + Sbjct: 121 ELKSYKQLPITFYQIQTKFRDEIRPRFGVMRAREFTMKDAYSFHIDKESLANTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + S D +DF Sbjct: 181 YNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLADSGEDDIAFSSD----------SDFA 230 Query: 241 DIISLNSIV--EQWTAPYAATSDV 262 I L V ++ AP A +DV Sbjct: 231 ANIELAEAVCYDKRAAPTQARTDV 254 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 107/183 (58%), Gaps = 8/183 (4%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D N D P+ K V + RGIEVGHIF G KYS ++ + G +GK + MG YG Sbjct: 387 DTRNVVDGDPSPDGKGVISIKRGIEVGHIFQLGDKYSKALNCSVLGKEGKPVTLMMGCYG 446 Query: 319 IGAMRVVAAVIESSHDGKGIIW------PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 IG R++AA IE +HD GIIW DS+APF ++++ +K+ D + +Y L Sbjct: 447 IGVSRIIAAAIEQNHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTL 506 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G +V DD E+ G +FA +L+G P +++V + ++++K E +R TG ++ +SL+ Sbjct: 507 KARGINVLLDDRDERAGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLD 566 Query: 433 EVI 435 E++ Sbjct: 567 ELL 569 >gi|229157395|ref|ZP_04285473.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228626122|gb|EEK82871.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 4342] Length = 566 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 70/162 (43%), Positives = 98/162 (60%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDESGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R T E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATAESEEVKVEELQTYIAN 563 >gi|228935133|ref|ZP_04097960.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824498|gb|EEM70303.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 566 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNYRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|169344114|ref|ZP_02865097.1| prolyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|169297725|gb|EDS79824.1| prolyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] Length = 570 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 121/225 (53%), Positives = 156/225 (69%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR G++ + + GIY+++PLG K ++NV I+REE Sbjct: 1 MKMSNMLVGTLREVPAEAEIESHKLMLRAGLMRKMAAGIYNYMPLGLKVIENVKNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E P L A+LW ESGR+D+YG EM RL DR+++ GPTHEEV TDI R+ Sbjct: 61 MNNAGAQEFLAPALIPAELWQESGRWDAYGAEMFRLKDRHNRDFCLGPTHEEVFTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKD YSFD EG +Y KM + Sbjct: 121 EIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDGYSFDKDQEGLDLAYEKMRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 Y+ IF+R GL + + A+SG IGG S EF+V ++ GE VFC+ Sbjct: 181 YVNIFNRCGLDAKTVAADSGAIGGSGSAEFMVKSEVGEDDVVFCT 225 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 109/188 (57%), Gaps = 7/188 (3%) Query: 259 TSDVHNEKLFDSLPE-NKRVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D N + + PE K ++ +RG EVGHIF GTKYS M ATF DGK MG Sbjct: 379 VGDFRNVTIGEKCPECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDGKAKPFIMGC 438 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSK 374 YGIG R VA++IE +D GIIWP VAP+ +S+I N+K +Q + E+IY L K Sbjct: 439 YGIGVTRTVASIIEQHNDENGIIWPLEVAPYHVSVIPANVKNEEQATK--AEEIYNELRK 496 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G + DD E+ G +F ++L+G P+++ VG K + + +VE K R G E +S+EEV Sbjct: 497 MGVEALLDDRKERAGVKFKDSELMGIPMRITVG-KMIGEGQVEFKLRNGGEVETLSIEEV 555 Query: 435 INYASHRF 442 N F Sbjct: 556 YNRVREEF 563 >gi|126654116|ref|ZP_01725934.1| prolyl-tRNA synthetase [Bacillus sp. B14905] gi|126589396|gb|EAZ83546.1| prolyl-tRNA synthetase [Bacillus sp. B14905] Length = 568 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 120/244 (49%), Positives = 169/244 (69%), Gaps = 4/244 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE+ SHK +LR G I Q++ G+YS+LPL ++ L + IIREE Sbjct: 1 MKQSKTFIPTLREVPADAEVKSHKQLLRAGFIRQNTSGVYSYLPLAKRVLSKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+ +P+LQSA+LW ESGR++ YG E++RL DR+D+ GPTHEEV+T + R Sbjct: 61 MEAINSIELLMPSLQSAELWQESGRWEKYGPELMRLKDRHDRDFALGPTHEEVITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y+ M+ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASRESLDETYDDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL + A++G IGG +HEF+VL++ GE + S D D+ + N + Sbjct: 181 YSNIFSRLGLNYRAVIADAGSIGGKGTHEFMVLSEIGEDTIAYS-DTSDY---AANIEMA 236 Query: 241 DIIS 244 ++I+ Sbjct: 237 EVIA 240 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 68/167 (40%), Positives = 92/167 (55%), Gaps = 1/167 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GT YS M+ TF GK MG YGIG R++AAV E D G Sbjct: 403 AEGIEVGHIFKLGTTYSAKMNGTFLDEQGKSQPFIMGCYGIGVSRILAAVAEHFQDENGF 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +AP+ I ++ + D+ +++Y L DV DD E+ G +FA ADL+ Sbjct: 463 TWPTQLAPYDIHVVPVNTKDEAQVALADELYGLLKSYRYDVLLDDRAERAGVKFADADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G P++V VG K + + VE+K R TG + EEVI++ + F N Sbjct: 523 GLPVRVTVGKKAI-EGIVEVKFRQTGETFEWKKEEVIDHLNEFFRKN 568 >gi|42782910|ref|NP_980157.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|217961239|ref|YP_002339807.1| prolyl-tRNA synthetase [Bacillus cereus AH187] gi|229140460|ref|ZP_04269015.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|81409464|sp|Q732Q0|SYP1_BACC1 RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|226731429|sp|B7HLF2|SYP_BACC7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|42738837|gb|AAS42765.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|217063356|gb|ACJ77606.1| prolyl-tRNA synthetase [Bacillus cereus AH187] gi|228643021|gb|EEK99297.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|324327716|gb|ADY22976.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 566 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|237738009|ref|ZP_04568490.1| prolyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] gi|229419889|gb|EEO34936.1| prolyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] Length = 569 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKL+LR GMI + + G+Y++LPLG KAL V I+R E Sbjct: 1 MRFSKSYIKTLKETPKEAEIASHKLLLRAGMIKKLTSGVYTYLPLGLKALKKVENIVRRE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ A+LW ESGR++ G M++L DR + + GPTHEEV+TD+ R+ Sbjct: 61 MDRAGAQEIFMPVLQPAELWKESGRWEVMGPLMMKLQDRAKRDFVLGPTHEEVVTDVIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF T E ++ M + Sbjct: 121 DVASYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHATRESLDEEFDNMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF GLK P+ A+SG IGG S EF VLAD+GE + ++C Sbjct: 181 YKRIFSSCGLKFRPVEADSGAIGGSGSKEFHVLADSGEDEIIYC 224 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/160 (45%), Positives = 99/160 (61%), Gaps = 5/160 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIEVGHIF GTKYS + ATF G H + MG YGIG R +A+ IE ++D G Sbjct: 403 SARGIEVGHIFKLGTKYSEKLEATFIDEKGVTHPIIMGCYGIGVSRTLASAIEQNNDEFG 462 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 I+WP ++AP+ + +I N+K +QV E++Y L G D DD E+ G +F A Sbjct: 463 IVWPSAIAPYVVDVIPANMKDAEQVA--LAEELYNSLLDEGIDTILDDRDERPGFKFKDA 520 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DL+GFP +VI G K ++ VE+K R TG ++S +EVI Sbjct: 521 DLIGFPFKVICGKK-AAEGIVELKIRKTGETFEISKDEVI 559 >gi|229197929|ref|ZP_04324645.1| Prolyl-tRNA synthetase [Bacillus cereus m1293] gi|228585647|gb|EEK43749.1| Prolyl-tRNA synthetase [Bacillus cereus m1293] Length = 566 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|297539468|ref|YP_003675237.1| prolyl-tRNA synthetase [Methylotenera sp. 301] gi|297258815|gb|ADI30660.1| prolyl-tRNA synthetase [Methylotenera sp. 301] Length = 573 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 113/218 (51%), Positives = 158/218 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F +E P DAE+ SH LM+R G+I + G+YSW+PLG + L V I+R+E Sbjct: 1 MRASQFFFNTQKEAPNDAELPSHILMVRAGLIKRLGSGLYSWMPLGLRVLRKVETIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q +LW E+GR+ +G +ML++ DR+ + +GPTHEEV+TDI RS Sbjct: 61 MNKAGALELLMPAVQPRELWDETGRWAVFGPQMLKITDRHSREFCFGPTHEEVITDIARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EVRSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFMMKDAYSFHTDFASLETTYANMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +F+RLGLK ++A++G IGGD SHEF VLAD+GE Sbjct: 181 YSNVFNRLGLKFRAVKADTGAIGGDGSHEFHVLADSGE 218 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 106/182 (58%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D+ P+ K + + RGIEVGHIF TKYS M+AT+ + ++MG Sbjct: 386 VADIRNVVEGDASPDGKGILSLCRGIEVGHIFQLRTKYSEAMNATYLDEASQTQVMEMGC 445 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +D +GII+P S+APF +++ I + A KIYA L+ Sbjct: 446 YGIGVSRIVGAAIEQGNDARGIIFPKSMAPFTVTICPIGYDKSEAVSAAANKIYADLNAA 505 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + DD GE+ G FA ADL+G P ++++G + ++D VE K R + ++L+ V+ Sbjct: 506 GIEALLDDRGERPGVMFAEADLMGIPHRLVIGERGLADGTVEYKGRTDAEAQMVALKNVV 565 Query: 436 NY 437 + Sbjct: 566 EF 567 >gi|222097264|ref|YP_002531321.1| prolyl-tRNA synthetase [Bacillus cereus Q1] gi|254782885|sp|B9IVA8|SYP_BACCQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|221241322|gb|ACM14032.1| prolyl-tRNA synthetase [Bacillus cereus Q1] Length = 566 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|229180095|ref|ZP_04307439.1| Prolyl-tRNA synthetase [Bacillus cereus 172560W] gi|228603304|gb|EEK60781.1| Prolyl-tRNA synthetase [Bacillus cereus 172560W] Length = 566 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 116/221 (52%), Positives = 155/221 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R GL + A+SG +GG +HEF+VL+D GE + Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTI 221 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|237800208|ref|ZP_04588669.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023065|gb|EGI03122.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 571 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S Sbjct: 181 YSNIFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFS 224 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 72/191 (37%), Positives = 109/191 (57%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +V+V + +++ +E K R + ++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRVVVSDRGLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINYASHR 441 + +V+++ R Sbjct: 558 VADVLSFIQGR 568 >gi|30263823|ref|NP_846200.1| prolyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47529247|ref|YP_020596.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49186669|ref|YP_029921.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|65321146|ref|ZP_00394105.1| COG0442: Prolyl-tRNA synthetase [Bacillus anthracis str. A2012] gi|118479041|ref|YP_896192.1| prolyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|165872601|ref|ZP_02217232.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167635829|ref|ZP_02394138.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167639857|ref|ZP_02398126.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170687854|ref|ZP_02879068.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170706810|ref|ZP_02897268.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177652150|ref|ZP_02934696.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190568409|ref|ZP_03021316.1| prolyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|196042144|ref|ZP_03109427.1| proline--tRNA ligase [Bacillus cereus NVH0597-99] gi|196044700|ref|ZP_03111935.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108] gi|218904947|ref|YP_002452781.1| prolyl-tRNA synthetase [Bacillus cereus AH820] gi|225865800|ref|YP_002751178.1| prolyl-tRNA synthetase [Bacillus cereus 03BB102] gi|227813273|ref|YP_002813282.1| prolyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|228916456|ref|ZP_04080022.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928867|ref|ZP_04091899.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228947538|ref|ZP_04109828.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229092859|ref|ZP_04223993.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|229123332|ref|ZP_04252536.1| Prolyl-tRNA synthetase [Bacillus cereus 95/8201] gi|229186058|ref|ZP_04313228.1| Prolyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|229602364|ref|YP_002868057.1| proline--tRNA ligase [Bacillus anthracis str. A0248] gi|254683474|ref|ZP_05147334.1| prolyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254721995|ref|ZP_05183784.1| prolyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254735857|ref|ZP_05193563.1| prolyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254739617|ref|ZP_05197311.1| prolyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254756010|ref|ZP_05208041.1| prolyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254759329|ref|ZP_05211354.1| prolyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|81583682|sp|Q81WL6|SYP1_BACAN RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|152074739|sp|A0RHJ2|SYP1_BACAH RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|226731426|sp|B7JJ97|SYP_BACC0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782882|sp|C3P5M1|SYP_BACAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782883|sp|C3L7A8|SYP_BACAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782884|sp|C1EP43|SYP_BACC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|30258467|gb|AAP27686.1| proline--tRNA ligase [Bacillus anthracis str. Ames] gi|47504395|gb|AAT33071.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49180596|gb|AAT55972.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|118418266|gb|ABK86685.1| proline--tRNA ligase [Bacillus thuringiensis str. Al Hakam] gi|164711633|gb|EDR17179.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167512258|gb|EDR87635.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167528786|gb|EDR91544.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170128228|gb|EDS97097.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170668170|gb|EDT18919.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172082519|gb|EDT67584.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190560413|gb|EDV14391.1| prolyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|196024735|gb|EDX63407.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108] gi|196026996|gb|EDX65620.1| proline--tRNA ligase [Bacillus cereus NVH0597-99] gi|218535709|gb|ACK88107.1| prolyl-tRNA synthetase [Bacillus cereus AH820] gi|225789269|gb|ACO29486.1| proline--tRNA ligase [Bacillus cereus 03BB102] gi|227007610|gb|ACP17353.1| proline--tRNA ligase [Bacillus anthracis str. CDC 684] gi|228597477|gb|EEK55127.1| Prolyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|228660108|gb|EEL15744.1| Prolyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228690481|gb|EEL44264.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228812058|gb|EEM58389.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830674|gb|EEM76279.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843035|gb|EEM88117.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266772|gb|ACQ48409.1| proline--tRNA ligase [Bacillus anthracis str. A0248] Length = 566 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|196036918|ref|ZP_03104302.1| prolyl-tRNA synthetase [Bacillus cereus W] gi|195990473|gb|EDX54457.1| prolyl-tRNA synthetase [Bacillus cereus W] Length = 566 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|121603656|ref|YP_980985.1| prolyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] gi|152112939|sp|A1VK86|SYP_POLNA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120592625|gb|ABM36064.1| prolyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] Length = 581 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SH+LM+R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHQLMMRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIEMS+P +Q A+LW E+GR+++ G E+LR+ DR+ + + PT EEV+TD+ R Sbjct: 61 MNRAGAIEMSMPVIQPAELWQETGRFEAMGPELLRIKDRHGRDFVVQPTSEEVVTDVMRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD +K SY M + Sbjct: 121 DIRSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQTAAKVSYQNMAEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL + A+SG IGGDLS EF V+A TGE V+C Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC 224 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 72/165 (43%), Positives = 104/165 (63%), Gaps = 3/165 (1%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K + A RGIEVGH+FY GTKYS M+ATF G +GK +++MG Y Sbjct: 394 ADIRNVVAGDPSPDGKGLLAIERGIEVGHVFYLGTKYSRAMNATFLGENGKPQFLEMGCY 453 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKVG 376 GIG R+ AA IE +HD +GIIWPD++APF + + I + A +K+Y+ L G Sbjct: 454 GIGITRLPAAAIEQNHDERGIIWPDAIAPFTVVICPITPERFPDVKAAADKLYSELLGAG 513 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 DV DD GE+ G+ FA +L+G P +V +G + + + +E +HR Sbjct: 514 VDVILDDRGERPGAMFADWELIGVPHRVTIGDRGLKEGHIEYQHR 558 >gi|229117305|ref|ZP_04246683.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228666205|gb|EEL21669.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-3] Length = 566 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 116/221 (52%), Positives = 155/221 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R GL + A+SG +GG +HEF+VL+D GE + Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTI 221 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQALIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ + IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGKNIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|30021908|ref|NP_833539.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|81433856|sp|Q819Y4|SYP1_BACCR RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|29897464|gb|AAP10740.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 14579] Length = 566 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|299534746|ref|ZP_07048076.1| prolyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1] gi|298729834|gb|EFI70379.1| prolyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1] Length = 568 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 126/277 (45%), Positives = 178/277 (64%), Gaps = 14/277 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE+ SHK +LR G I Q++ G+YS+LPL ++ L + IIREE Sbjct: 1 MKQSKTFIPTLREVPADAEVKSHKQLLRAGFIRQNTSGVYSYLPLAKRVLTKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+ +P+LQSA+LW ESGR++ YG E++RL DR+D+ GPTHEEV+T + R Sbjct: 61 MEAINSIELLMPSLQSAELWQESGRWEKYGPELMRLKDRHDRDFALGPTHEEVITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y M+ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASRESLDETYEDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL + A++G IGG +HEF+VL++ GE + S+ +D+ Sbjct: 181 YSNIFSRLGLNYRAVIADAGSIGGKGTHEFMVLSEIGEDTIAY----------SDTSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 I + ++ + A DV EK+ + PE K + Sbjct: 231 ANIEMAEVIVDYQPSDEALKDV--EKV--ATPEQKTI 263 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 91/167 (54%), Gaps = 1/167 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GT YS M+ TF GK MG YGIG R++AAV E D G Sbjct: 403 AEGIEVGHIFKLGTTYSAKMNGTFLDEQGKAQPFIMGCYGIGVSRILAAVAEHFQDDNGF 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +AP+ I ++ + D+ E++Y L DV DD E+ G +FA ADL+ Sbjct: 463 TWPTQLAPYDIHVVPVNTKDEAQVALAEELYGLLKSYRYDVLLDDRPERAGVKFADADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G P++V VG K ++ VE+K R TG + EEVI+ + F N Sbjct: 523 GLPVRVTVGKK-ATEGIVEVKFRQTGETFEWKKEEVIDRLNEFFRKN 568 >gi|49481697|ref|YP_037880.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|81395110|sp|Q6HEZ6|SYP1_BACHK RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|49333253|gb|AAT63899.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 566 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|52141669|ref|YP_085160.1| prolyl-tRNA synthetase [Bacillus cereus E33L] gi|81686584|sp|Q636K7|SYP1_BACCZ RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|51975138|gb|AAU16688.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus cereus E33L] Length = 566 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEIKVEELQTYIAN 563 >gi|301055309|ref|YP_003793520.1| prolyl-tRNA synthetase [Bacillus anthracis CI] gi|300377478|gb|ADK06382.1| prolyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 566 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|224476386|ref|YP_002633992.1| prolyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|222420993|emb|CAL27807.1| putative prolyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] Length = 566 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK F+P ++E P +AE SH+L+L+ G+I Q + G+YS+LPL + L+ + AI+REE Sbjct: 1 MRQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGVYSYLPLATRVLNKITAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ ++LW ESGR+D+YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQPSELWEESGRWDAYGSELMRLTDRNGRQFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +YN+M+ + Sbjct: 121 EVKSYKQLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDETYNQMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R G+ + P+ A+SG IGG +HEF+ L++ GE + S++ Sbjct: 181 YSRIFKRAGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVYSEN 226 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 2/165 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E + D GI Sbjct: 402 AEGIEVGQVFKLGTKYSETMNATFLDNQGKAKPLIMGCYGIGVSRTLSAIVEQNSDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI I R+ ++IYA L + +V +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLITINPKKDDQRELGDQIYAELQQ-SYEVLYDDRKERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P++++VG K + VE+K R G E++ + + +Y + ++ Sbjct: 521 GLPIRIVVG-KRADEGIVEVKRRDNGESEEVEVSNLASYIDNLYT 564 >gi|229104381|ref|ZP_04235050.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228679079|gb|EEL33287.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-28] Length = 566 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 116/221 (52%), Positives = 155/221 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R GL + A+SG +GG +HEF+VL+D GE + Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTI 221 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQALIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|323701857|ref|ZP_08113527.1| prolyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] gi|323533161|gb|EGB23030.1| prolyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] Length = 568 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AE+ SH+L+LR G I + + GIY++LPL Q+ L + I+REE Sbjct: 1 MRTSQMLMPTLREVPAEAEVVSHQLLLRAGFIRKSASGIYTYLPLAQRVLKKIKEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ +P +Q A++W+ESGR+ YG E+ RL DR+++ GPTHEEV+T + R Sbjct: 61 MDKQGGQELLMPIVQPAEMWLESGRWHVYGPELFRLKDRHNRDFCLGPTHEEVITILVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ +P YQIQ KFRDE RPRFG+MR REF+MKD YSFD G SY KM+ + Sbjct: 121 EVRSYKQMPLLLYQIQNKFRDERRPRFGLMRGREFIMKDLYSFDRDEAGLDISYQKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSK 225 Y +F+R GLK P+ A+SG IGG +HEF+VLAD+GE + FCS+ Sbjct: 181 YTNVFNRCGLKFRPVEADSGAIGGSDTHEFMVLADSGEAAILFCSQ 226 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 67/157 (42%), Positives = 102/157 (64%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 ARGIEVG IF GTKYS + ATF +GK+ + MG YGIG R +AA IE +HD G Sbjct: 401 QARGIEVGQIFKLGTKYSKALGATFLDENGKEKPIVMGCYGIGVSRTMAAAIEQNHDQDG 460 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP S+AP+ +I + A D+ E +Y +L+++G + DD E+ G +F ADL Sbjct: 461 IIWPASIAPYHAIVIPVSAKDEKQMQLAESLYNKLNQIGVETVLDDRAERPGVKFKDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G+PL+++VG+K ++D VE++ R +G + + L+++ Sbjct: 521 IGYPLRIVVGNKAMTDGLVEVRQRKSGQTDLIPLDQI 557 >gi|240013893|ref|ZP_04720806.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI18] gi|240016334|ref|ZP_04722874.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA6140] gi|240121462|ref|ZP_04734424.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1] gi|260440251|ref|ZP_05794067.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] Length = 570 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 127/275 (46%), Positives = 178/275 (64%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 237 PTLPLKG---ERAAAQAVLTKVHTPNVKTIESLVE 268 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A ++IYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDTV-REAADRIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRGNEAQAVAIGEIV 561 >gi|83589892|ref|YP_429901.1| prolyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] gi|114152213|sp|Q2RJN1|SYP_MOOTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|83572806|gb|ABC19358.1| prolyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] Length = 573 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 116/226 (51%), Positives = 157/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ P L+E P +AEI SH+L+LR G I + + GIY++LPLG++ L + IIREE Sbjct: 1 MRASELLAPTLRETPAEAEIVSHQLLLRGGFIRKAAAGIYTYLPLGRRVLAKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q A+LW ESGR++ YG+EM RL DR+ + GPTHEE++T + RS Sbjct: 61 MDRAGGQEVVLPIIQPAELWQESGRWEVYGEEMFRLQDRHRRQFCLGPTHEEIITALVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE RPRFG++R REF+MKD YSFDL EG SY KM+ + Sbjct: 121 EVTSYKQLPLLLYQIQNKYRDERRPRFGLLRGREFIMKDLYSFDLDQEGLNQSYRKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSK 225 Y +F R GL P++A+SG IGG+ SHEF+ LA GE V+C + Sbjct: 181 YSNVFRRCGLDFRPVQADSGAIGGNYSHEFMALATAGEALLVYCRE 226 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 91/144 (63%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 ARGIEVG +F GTKYS + A + A G++H + MG YGIG R +AA++E HD +G Sbjct: 401 QARGIEVGQVFQLGTKYSGALGANYTDARGQEHPIVMGCYGIGVSRTMAAIVEQCHDDQG 460 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP SVAP+++ +I D R E +Y L+ G +V +DD E+ G +F ADL Sbjct: 461 IIWPLSVAPYQVVIIPASLKDDGQRQVAEGLYRELAAAGVEVVYDDRDERAGLKFVEADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 +G+PL++ VG + ++ V++K R Sbjct: 521 IGYPLRITVGKRTITSGTVDVKWR 544 >gi|229098288|ref|ZP_04229235.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|228685186|gb|EEL39117.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-29] Length = 566 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 116/221 (52%), Positives = 155/221 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R GL + A+SG +GG +HEF+VL+D GE + Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTI 221 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQALIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|294788637|ref|ZP_06753879.1| proline--tRNA ligase [Simonsiella muelleri ATCC 29453] gi|294483514|gb|EFG31199.1| proline--tRNA ligase [Simonsiella muelleri ATCC 29453] Length = 571 Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 120/231 (51%), Positives = 159/231 (68%), Gaps = 2/231 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLMLR G+I ++ G+Y+W+P+G + L V I+REE Sbjct: 1 MKASQFFISTLKEAPAEATLASHKLMLRAGLIKANASGLYTWMPMGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G +E+ +P +QSADLW ESGR+ YG E+LR+ DR+D + PT EE++TDI R Sbjct: 61 MNRVGCVELLMPVIQSADLWKESGRWQFYGDELLRITDRHDNEFCFSPTCEEMITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEG-SKHSYNKMFV 179 I SY+ LP FY I KFRDE RPRFGVMR+REF+MKDAYSF E + Y M+ Sbjct: 121 EINSYKQLPKNFYHINTKFRDERRPRFGVMRAREFVMKDAYSFHADFESLVRDGYQPMYD 180 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 +Y RIF+RLGL P+ A++G IGG SHEF VLAD+GE V D D+ Sbjct: 181 AYCRIFNRLGLNFRPVAADTGSIGGTGSHEFQVLADSGE-DVIAYSDSSDY 230 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 68/159 (42%), Positives = 99/159 (62%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F TKYS M+ATF +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 405 ARGIEVGHVFQLRTKYSEAMNATFLDNNGKSQIMEMGCYGIGVTRVVAAAIEQNNDEKGI 464 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW D++APF + ++ N K V + A +KI+A L G DV DD E+ G A ++ Sbjct: 465 IWTDAMAPFTVVIVPMNYKKSADV-KAAADKIHAELLAQGVDVLLDDRDERAGVLLADSE 523 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R G + +++ E++ Sbjct: 524 LLGIPHRIVIGDRALKEGNVEYAERKVGESQSIAVNEIV 562 >gi|47222174|emb|CAG11600.1| unnamed protein product [Tetraodon nigroviridis] Length = 483 Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 146/425 (34%), Positives = 226/425 (53%), Gaps = 36/425 (8%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 S +LM + G+IH + G Y +LP ++++ + +I +E G ++ +P+L SA+LW Sbjct: 77 SQRLMQQAGLIHPSNPGCYYYLPATVRSVEKLIRVIDQEMQEIGGQKLDMPSLCSAELWK 136 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPFTFYQIQLKFR 140 S R+D GKE+LRL DR+ PTHEE +T + SY+ LP YQI KFR Sbjct: 137 ASERWDLMGKELLRLKDRHGGDYCLAPTHEEAVTTLVAHQTSLSYKQLPLLLYQITRKFR 196 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 DE +PRFG++R REF MKD YSFD++ E + +Y + +Y R+F RLGL + ++A++G Sbjct: 197 DEPKPRFGLLRGREFYMKDMYSFDVSEEAAYQTYESVCQAYTRLFARLGLHCVQVQADTG 256 Query: 201 PIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 IGG LSHEF + AD GE + + C I + ++D D P T Sbjct: 257 NIGGKLSHEFQLPADIGEDRLLLCGNCSFAANIETVSSDRTD------------CPQCRT 304 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 + V ++GIEVGH FY G KYS +ATF A K +MG +G+ Sbjct: 305 GTL--------------VESKGIEVGHTFYLGKKYSSVFNATFSNAQNKLAEAEMGCFGL 350 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV------CRDACEKIYARLS 373 G R++AA IE +GI WP +AP+++ ++ K +V + + + L Sbjct: 351 GVTRILAAAIEVMSTEEGIRWPGLLAPYQVCVVPPKKGSKVDKATIIAEELVQTLTVTLP 410 Query: 374 KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD-SKVEIKHRLTGIREDMSL 431 ++ +V DD + IG + A LG+P V+VG + + S+ E+ + TG +S Sbjct: 411 RLRGEVVLDDRTQMTIGRRLKDASKLGYPYVVVVGQGALEEPSRFEVICQQTGATMFLSQ 470 Query: 432 EEVIN 436 E +++ Sbjct: 471 EGLLD 475 >gi|239999200|ref|ZP_04719124.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|240080454|ref|ZP_04724997.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|240113176|ref|ZP_04727666.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|240115935|ref|ZP_04729997.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|240118232|ref|ZP_04732294.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|240123781|ref|ZP_04736737.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|240125970|ref|ZP_04738856.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|240128484|ref|ZP_04741145.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|254493969|ref|ZP_05107140.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268603943|ref|ZP_06138110.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|268682406|ref|ZP_06149268.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|268684564|ref|ZP_06151426.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|226513009|gb|EEH62354.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268588074|gb|EEZ52750.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|268622690|gb|EEZ55090.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|268624848|gb|EEZ57248.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] Length = 570 Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 127/275 (46%), Positives = 178/275 (64%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 237 PTLPLKG---ERAAAQAVLTKVHTPNVKTIESLVE 268 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A ++IYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDTV-REAADRIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIV 561 >gi|229162755|ref|ZP_04290712.1| Prolyl-tRNA synthetase [Bacillus cereus R309803] gi|228620637|gb|EEK77506.1| Prolyl-tRNA synthetase [Bacillus cereus R309803] Length = 566 Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 116/221 (52%), Positives = 155/221 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R GL + A+SG +GG +HEF+VL+D GE + Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTI 221 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDESGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY+ L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGESIYSSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|251797797|ref|YP_003012528.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247545423|gb|ACT02442.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 571 Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 118/222 (53%), Positives = 156/222 (70%), Gaps = 1/222 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ LP L+E P +AE SH+LMLR G+I Q + GIY++LP G+ L + IIREE Sbjct: 1 MRQSQLLLPTLREAPSEAEAVSHQLMLRAGLIRQLAAGIYTYLPAGRLVLRKLEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q ADLW +SGRY+ YG E++RL DR+D+ GPTHEEV+TD+ R Sbjct: 61 MDNAGCQEVFMPAMQPADLWRQSGRYEKYGPELVRLKDRHDREFALGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP T YQIQ KFRDE RPR+G++R REF+MKDAYSFD EG SY +M+ + Sbjct: 121 EVNSYRQLPVTLYQIQTKFRDEKRPRYGLLRGREFMMKDAYSFDADWEGLNESYQRMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGETQV 221 Y RIF R GL P+ A++G IGG+ +HEF+ LAD GE + Sbjct: 181 YHRIFSRCGLHFRPVEADAGTIGGEGGTHEFMALADIGEDTI 222 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/191 (37%), Positives = 105/191 (54%), Gaps = 4/191 (2%) Query: 257 AATSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A DV N L D P E K RGIEVG +F GTKYS M A + A G + + Sbjct: 382 ARLRDVRNAVLGDGCPNCAEGKLRMFRGIEVGQVFKLGTKYSEVMQANYLDATGSEKPII 441 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG RV++AV+E HD +GI WP +AP+++ ++ + A D D K+Y L Sbjct: 442 MGCYGIGISRVMSAVVEQHHDEQGIRWPLELAPYQVHVVPVSAKDGQQMDVAGKLYRELM 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V DD E+ G +F +DL+G P++++VG + +D VE+K+R G + EE Sbjct: 502 SAGFEVLLDDRDERPGVKFKDSDLIGIPVRIVVGRQ-AADGVVELKYRNEGEVLQATTEE 560 Query: 434 VINYASHRFSN 444 + + F + Sbjct: 561 ALGLVTGYFRS 571 >gi|269797927|ref|YP_003311827.1| prolyl-tRNA synthetase [Veillonella parvula DSM 2008] gi|269094556|gb|ACZ24547.1| prolyl-tRNA synthetase [Veillonella parvula DSM 2008] Length = 572 Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 114/226 (50%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M +K + P L+E P DA++ S +LMLR G + + + G+YS+LPLG K++ + AI+REE Sbjct: 1 MLATKLYAPTLREVPSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWKSIKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDNEFCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKDAYSFD+ G SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDAYSFDIDEAGLDESYKSMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y RIF R GL P+ A+SG IGG +HEF+ +A+ GE V+C+K Sbjct: 181 YTRIFTRCGLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTK 226 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/146 (43%), Positives = 90/146 (61%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG +F GTKYS + ATF +G+ + + MG YGIG R +AA IE HD GI Sbjct: 406 AKGIEVGQVFKLGTKYSEALQATFLDQNGRPNPMIMGCYGIGVSRTLAAAIEQYHDENGI 465 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP S+APF+ ++ I A D+ + IY L G DV DD ++ G +F ADL+ Sbjct: 466 IWPRSIAPFEAVIVPINAKDEALMATSQTIYTALQNAGVDVLLDDRKDRAGVKFKDADLI 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G+PL++ V + +++VEI+ R +G Sbjct: 526 GYPLRITVSKNTLENNEVEIQIRKSG 551 >gi|229031449|ref|ZP_04187449.1| Prolyl-tRNA synthetase [Bacillus cereus AH1271] gi|228729738|gb|EEL80718.1| Prolyl-tRNA synthetase [Bacillus cereus AH1271] Length = 566 Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG +GG +HEF+VL+D GE + S Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYS 224 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|269214916|ref|ZP_05987412.2| proline--tRNA ligase [Neisseria lactamica ATCC 23970] gi|269208774|gb|EEZ75229.1| proline--tRNA ligase [Neisseria lactamica ATCC 23970] Length = 625 Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 127/273 (46%), Positives = 175/273 (64%), Gaps = 9/273 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 56 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 115 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR+ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 116 MARAGSVELLMPVVQPAELWQESGRWKFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 175 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 176 EVNSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 235 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 236 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 291 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSL 271 + L + A A VH N K DSL Sbjct: 292 PTLPLKG---ERAAAQAELVKVHTPNVKTIDSL 321 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 459 ARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 518 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 519 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 577 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 578 LLGIPHRIVIGDRALKEGNVEYAERRENEAQAVAIGEIV 616 >gi|325204335|gb|ADY99788.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240355] Length = 570 Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 127/275 (46%), Positives = 178/275 (64%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ Y KE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYXKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 237 PTLPLKG---ERAAAQAVLTKVHTPNVKTIESLVE 268 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIV 561 >gi|268596592|ref|ZP_06130759.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268601604|ref|ZP_06135771.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|268550380|gb|EEZ45399.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268585735|gb|EEZ50411.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18] Length = 580 Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 127/275 (46%), Positives = 178/275 (64%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 11 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 70 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 71 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 130 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 131 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 190 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 191 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 246 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 247 PTLPLKG---ERAAAQAVLTKVHTPNVKTIESLVE 278 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 414 ARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 473 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A ++IYA L G DV DD E+ G ++ Sbjct: 474 IWTKAMAPFEVVIVPMNYKKSDTV-REAADRIYAELLAAGADVLLDDRDERAGVLLNDSE 532 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 533 LLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIV 571 >gi|121593268|ref|YP_985164.1| prolyl-tRNA synthetase [Acidovorax sp. JS42] gi|222109990|ref|YP_002552254.1| prolyl-tRNA synthetase [Acidovorax ebreus TPSY] gi|152074743|sp|A1W4B3|SYP_ACISJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782898|sp|B9ME00|SYP_DIAST RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120605348|gb|ABM41088.1| prolyl-tRNA synthetase [Acidovorax sp. JS42] gi|221729434|gb|ACM32254.1| prolyl-tRNA synthetase [Acidovorax ebreus TPSY] Length = 581 Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SH+LM+R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHQLMMRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E ++P +Q A+LW E+GR+D G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVECTMPVVQPAELWQETGRFDKMGPELLRIHDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD G+K SY M + Sbjct: 121 ELRSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQAGAKASYQVMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL+ + A+SG IGGDLS EF V+A TGE V+C Sbjct: 181 YRRIFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC 224 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 74/188 (39%), Positives = 110/188 (58%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + A RGIEVGH+FY GTKYS M+ATF G DGK + +MG Sbjct: 393 VADLRNVVAGDLSPDGQGELAIERGIEVGHVFYLGTKYSKAMNATFLGEDGKPAFFEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + + + + + E +YA L Sbjct: 453 YGIGVTRLPAAAIEQNHDERGIIWPDAIAPFTVVICPVGMDRSEAVKAQAESLYADLLAA 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G+ FA +L+G P +V +G K + + +VE +HR + + +++ Sbjct: 513 GVDVILDDRGERPGAMFADWELIGVPHRVTIGDKSLKEGQVEYQHRRDASATKVGVADIL 572 Query: 436 NYASHRFS 443 + R + Sbjct: 573 AHVKERLA 580 >gi|194098918|ref|YP_002001983.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|291043544|ref|ZP_06569260.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|293398861|ref|ZP_06643026.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae F62] gi|193934208|gb|ACF30032.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|291012007|gb|EFE03996.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|291610275|gb|EFF39385.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae F62] Length = 599 Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 127/275 (46%), Positives = 178/275 (64%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 265 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 266 PTLPLKG---ERAAAQAVLTKVHTPNVKTIESLVE 297 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 433 ARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 492 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A ++IYA L G DV DD E+ G ++ Sbjct: 493 IWTKAMAPFEVVIVPMNYKKSDTV-REAADRIYAELLAAGADVLLDDRDERAGVLLNDSE 551 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 552 LLGIPHRIVIGDRALKEGNVEYAERRGNEAQAVAIGEIV 590 >gi|317164487|gb|ADV08028.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107] Length = 599 Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 127/275 (46%), Positives = 178/275 (64%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 265 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 266 PTLPLKG---ERAAAQAVLTKVHTPNVKTIESLVE 297 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 433 ARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 492 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A ++IYA L G DV DD E+ G ++ Sbjct: 493 IWTKAMAPFEVVIVPMNYKKSDTV-REAADRIYAELLAAGADVLLDDRDERAGVLLNDSE 551 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 552 LLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIV 590 >gi|91786735|ref|YP_547687.1| prolyl-tRNA synthetase [Polaromonas sp. JS666] gi|123356060|sp|Q12FA3|SYP_POLSJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91695960|gb|ABE42789.1| prolyl-tRNA synthetase [Polaromonas sp. JS666] Length = 580 Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 156/224 (69%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SH+LM+R GMI + GIYS++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHQLMMRAGMIKKLGAGIYSYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM++P +Q A+ W E+GR++ G E+LR+ DR+ + + PT EEV+TD+ R Sbjct: 61 MNRAGAVEMTMPVIQPAEFWQETGRFEKMGPELLRIKDRHGRDFVVQPTSEEVITDVMRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG+MR REF MKDAYSFD +K SY M + Sbjct: 121 DIKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDQASAKASYQIMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL + A+SG IGGDLS EF V+A TGE V+C Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC 224 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 72/167 (43%), Positives = 106/167 (63%), Gaps = 5/167 (2%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N + P+ K V A RGIEVGH+FY GTKYS M+ATF +GK +++MG Sbjct: 392 VADLRNVVAGNPSPDGKGVLAIERGIEVGHVFYLGTKYSQAMNATFLDENGKPQFLEMGC 451 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC--RDACEKIYARLSK 374 YGIG R+ AA IE +HD +GIIWPD++APF + + I + D+ + A +K+Y L Sbjct: 452 YGIGITRLPAAAIEQNHDERGIIWPDAIAPFTVVICPI-SPDRFADVKAAADKLYGELLA 510 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD GE+ G+ FA +L+G P +V +G + + + ++E +HR Sbjct: 511 AGVDVILDDRGERPGAMFADWELIGVPHRVTIGDRGLKEGQLEYQHR 557 >gi|268595028|ref|ZP_06129195.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|268599257|ref|ZP_06133424.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|268686874|ref|ZP_06153736.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|268548417|gb|EEZ43835.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|268583388|gb|EEZ48064.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|268627158|gb|EEZ59558.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] Length = 580 Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 127/275 (46%), Positives = 178/275 (64%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 11 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 70 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 71 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 130 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 131 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 190 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 191 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 246 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 247 PTLPLKG---ERAAAQAVLTKVHTPNVKTIESLVE 278 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 414 ARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 473 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A ++IYA L G DV DD E+ G ++ Sbjct: 474 IWTKAMAPFEVVIVPMNYKKSDTV-REAADRIYAELLAAGADVLLDDRDERAGVLLNDSE 532 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 533 LLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIV 571 >gi|312898748|ref|ZP_07758137.1| prolyl-tRNA synthetase [Megasphaera micronuciformis F0359] gi|310620179|gb|EFQ03750.1| prolyl-tRNA synthetase [Megasphaera micronuciformis F0359] Length = 574 Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 115/226 (50%), Positives = 164/226 (72%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+++P +A++ASHKLML+ GM+ +++ G+YS+LPLG+K V IIR+E Sbjct: 1 MLASKLYAPTLRDDPAEADVASHKLMLKAGMLRKNAAGLYSFLPLGRKVCLKVENIIRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA E+ +P +Q A++W E+GR+D YG EM +L DR+D GPTHEE++T + R+ Sbjct: 61 MNRSGAQEVMMPIVQPAEIWRETGRWDVYGPEMFKLKDRHDNEYCLGPTHEELITTLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP +Q+Q K+RDE+RPRFG+MRSREF+MKDAYSFD+ EG SY M+ + Sbjct: 121 ELRSYKQLPVNLWQMQNKYRDEIRPRFGLMRSREFVMKDAYSFDVDREGMIKSYESMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y RIF G++ P+ A+SG IGG+ SHEF+ LA GE V C+K Sbjct: 181 YSRIFTECGIEYRPVLADSGQIGGNYSHEFMALAKAGEADVVICTK 226 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 99/167 (59%), Gaps = 1/167 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVG +F GTKYS ++ATF DGK MG YGIG R VAA IE HD KGII Sbjct: 405 QGIEVGQVFGLGTKYSESLNATFLDKDGKAKPFVMGCYGIGVTRTVAATIEQLHDDKGII 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP + APF+ ++ + D+ +K+Y L + DV DD E+ G +F ADL+G Sbjct: 465 WPVATAPFEAVVLPVNMKDEAIVSVAKKLYDELLDLDVDVLLDDRDERAGVKFNDADLIG 524 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +P+++ VGSK +D KVE+K R T E++++E + + + R Sbjct: 525 YPVRLTVGSK-AADGKVEVKIRRTDEEEEVTIEGAAEHVARLLRDLR 570 >gi|330877991|gb|EGH12140.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 412 Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 131/303 (43%), Positives = 189/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S+ +D+ Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVF----------SDGSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I V + A AAT ++ +L D+ N + A+ +E + LP+ Sbjct: 231 ANIEKAEAVPREKARPAATEEL---RLIDT--PNAKTIAQLVE---------GFDLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TVK 279 >gi|62078861|ref|NP_001014086.1| probable prolyl-tRNA synthetase, mitochondrial precursor [Rattus norvegicus] gi|73919763|sp|Q5M7W7|SYPM_RAT RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial; AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags: Precursor gi|56789529|gb|AAH88403.1| Prolyl-tRNA synthetase 2, mitochondrial (putative) [Rattus norvegicus] gi|149035787|gb|EDL90468.1| rCG50302 [Rattus norvegicus] Length = 475 Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 146/412 (35%), Positives = 218/412 (52%), Gaps = 36/412 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L+ D S +LML+ G+I S G Y +P +A++ + +I +E G +++ Sbjct: 59 LEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKIN 118 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLP 129 +P+L A+LW +GR+D G+E+LRL DR+ K GPTHEE +T + S K SY+ LP Sbjct: 119 MPSLSPAELWRATGRWDLMGRELLRLKDRHGKEYCLGPTHEEAVTALVASQKKLSYKQLP 178 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 YQ+ KFRDE RPRFG++R REF MKD Y+FD + E ++ +Y+ + +Y R+F RLG Sbjct: 179 LLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQETYSLVCDAYCRLFDRLG 238 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFDDIISLNSI 248 L+ + RA+ G IGG +SHEF + D GE + V C S NT+ D+ I Sbjct: 239 LRWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSCHF-----SANTEIVDLS--QKI 291 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 P T +GIEVGH FY GTKYS +A F A G+ Sbjct: 292 CPDCQGPLTET--------------------KGIEVGHTFYLGTKYSSIFNAHFTNAHGE 331 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACE 366 +MG YG+G R++AA IE I WP +AP+++ +I K + + + E Sbjct: 332 SLLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPSLLAPYQVCIIPPKKGSKEAAATEIVE 391 Query: 367 KIY----ARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 ++Y L ++ +V DD IG++ A+ LG+P +I + + D Sbjct: 392 RLYDDVTEALPQLRGEVLLDDRTHLTIGNRLKDANKLGYPFVIIASKRALED 443 >gi|294668560|ref|ZP_06733657.1| proline--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309523|gb|EFE50766.1| proline--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 569 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 129/273 (47%), Positives = 180/273 (65%), Gaps = 9/273 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RL L+ P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLDLEFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSL 271 + L E+ TA A + VH N K DSL Sbjct: 237 PTLPLKG--ERATA-QAELAKVHTPNVKTIDSL 266 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 89/144 (61%), Gaps = 3/144 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGII Sbjct: 405 RGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGII 464 Query: 340 WPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 W ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++L Sbjct: 465 WTKAMAPFEVVIVPMNYKKSDAV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSEL 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 LG P ++++G + + + VE R Sbjct: 524 LGIPHRIVIGDRALKEGNVEYAER 547 >gi|229918663|ref|YP_002887309.1| prolyl-tRNA synthetase [Exiguobacterium sp. AT1b] gi|229470092|gb|ACQ71864.1| prolyl-tRNA synthetase [Exiguobacterium sp. AT1b] Length = 569 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 117/221 (52%), Positives = 152/221 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DAE SH+L++R G I Q++ GIYS+LPLG K L N+ IIREE Sbjct: 4 MKQSRLLMPTLREVPADAEAVSHQLLVRGGFIRQNAAGIYSYLPLGHKVLHNIQTIIREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q A+LW E+GR+ YG E++RL DR+D+ G THEE++T I R Sbjct: 64 MNRAGAQELLMPAIQPAELWEETGRWGIYGPELMRLTDRHDRRFALGATHEELITSIVRD 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE RPRFG++R REFLMKDAYSF T E Y M+ + Sbjct: 124 ELNSYKKLPMNLYQIQTKYRDERRPRFGLLRGREFLMKDAYSFHATQEDLDEEYTNMYNA 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R GLK P+ A+SG IGG +HEF LAD GE + Sbjct: 184 YSRIFDRTGLKYRPVVADSGAIGGKDTHEFQALADIGEDTI 224 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 70/165 (42%), Positives = 102/165 (61%), Gaps = 2/165 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVG +F GT+YS M ATF +G+ + MG YGIG R ++A++E HD +GI Sbjct: 404 ARGIEVGQVFKLGTRYSEAMGATFLNEEGRAEPLIMGCYGIGVSRTLSAIVEQHHDDRGI 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + LI I A D+ + ++Y L + DV +DD E+ G +FA ADL+ Sbjct: 464 VWPRNVAPFDLHLIAINAKDETQVELANRLYEELGQT-YDVLFDDRKERAGVKFADADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P++V VG K + VE+K R TG + S++E+ + +FS Sbjct: 523 GLPIRVNVGKK-AGEGIVEVKVRATGEVIETSIDELKEVIASKFS 566 >gi|76613805|ref|XP_585755.2| PREDICTED: hypothetical protein [Bos taurus] gi|297473149|ref|XP_002686423.1| PREDICTED: hypothetical protein [Bos taurus] gi|296489106|gb|DAA31219.1| hypothetical protein BOS_3571 [Bos taurus] Length = 475 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 144/406 (35%), Positives = 216/406 (53%), Gaps = 36/406 (8%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D S +LML+ G+IH S G Y LP +A++ + +I +E G ++++P+L Sbjct: 65 DLTCKSQRLMLQMGLIHPASPGCYHLLPYTVRAMEKLVRVIDQEMQTIGGQKVNMPSLSP 124 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH-IKSYRNLPFTFYQI 135 A+LW + R+DS G+E+LRL DR+ K GPTHEE +T + S SY+ LPF YQ+ Sbjct: 125 AELWRATKRWDSMGRELLRLRDRHGKDYCLGPTHEEAITALVASQKTLSYKQLPFLLYQV 184 Query: 136 QLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 KFRDE RPRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F+RLGL+ I + Sbjct: 185 TRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQLTYSLVCDAYSSLFNRLGLRCIKV 244 Query: 196 RAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 +A+ G IGG +SHEF + D GE + V C P + + + + S + Sbjct: 245 QADVGSIGGMVSHEFQLPVDVGEDRLVVC-------PSCHFSANMETLDSSRTNCPACQG 297 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 P T +GIEVGH FY GTKYS +A F GK +M Sbjct: 298 PLTET--------------------KGIEVGHTFYLGTKYSSIFNAQFINVHGKPSLAEM 337 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK------AHDQVCRDACEKI 368 G YG+G R++AA IE + WP +AP+++ LI K A ++ D I Sbjct: 338 GCYGLGVTRILAAAIEVLSTEDCVRWPGLLAPYQVCLIPPKKGSKEEAAAELAGDLYNHI 397 Query: 369 YARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 + ++ +V DD IG++ A+ LG+P +I + + D Sbjct: 398 TEAVPQLQGEVLLDDRTHLTIGNRLKDANKLGYPFVIIAAKRALDD 443 >gi|228909643|ref|ZP_04073466.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228849932|gb|EEM94763.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 200] Length = 566 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 123/253 (48%), Positives = 165/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDCLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 72/162 (44%), Positives = 100/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + V R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDVQREMGENIYNSLQEKGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|78485419|ref|YP_391344.1| prolyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] gi|114152273|sp|Q31GQ3|SYP_THICR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78363705|gb|ABB41670.1| prolyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] Length = 572 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 118/226 (52%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S L +E P DA + SH+LMLR G+I + G+Y+WLPLG + L V AIIR+E Sbjct: 1 MKTSSLLLATTRETPADAVVISHQLMLRAGIIRPLAGGLYNWLPLGVRVLRKVEAIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ A E+ +P +Q +LW ESGR ++YG E+LR DR+ + GPTHEE++TD+ R Sbjct: 61 MNKAQAQELLMPVVQPMELWEESGRAEAYGPELLRFKDRHQREFALGPTHEEIITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + + +Y M+ + Sbjct: 121 EIRSYKQLPANFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHMDKDSLQKTYEDMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL P++A++G IGG+ SHEF VLAD+GE + S D Sbjct: 181 YNRIFTRLGLDFRPVQADTGSIGGEGSHEFHVLADSGEDDIAFSSD 226 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 98/167 (58%), Gaps = 1/167 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS ++AT + + ++MG YGIG RVVAA IE ++D KGII Sbjct: 406 RGIEVGHIFQLGNKYSEALNATVLNENSRAQILEMGCYGIGVTRVVAAAIEQNYDDKGII 465 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP+++APF++ ++ ++ H +A +Y L+ G +V DD E+ G F +L+ Sbjct: 466 WPEAIAPFQVCIVPMQMHKSPRVEEAVMTLYNELTAKGIEVLLDDRKERPGVMFNDMELI 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G P ++++G + + ++E KHR +D+ E + + + S N Sbjct: 526 GIPHRIVIGERGLDKGEIEYKHRRDEKSQDIPEAEFMEFLLGKLSGN 572 >gi|319788022|ref|YP_004147497.1| prolyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317466534|gb|ADV28266.1| prolyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 565 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 113/218 (51%), Positives = 153/218 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SHKLMLR GMI + + G+Y+W PLG + L V A++REE Sbjct: 1 MRLSRFHLHTTKETPADAELVSHKLMLRAGMIRKLAAGLYTWTPLGLRVLRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +PT+Q +LW E+GR+ +G ++L++ DR + + PT EE +TD R Sbjct: 61 MNRAGAVELQLPTIQPRELWEETGRWGKFGGQLLKIKDRKEAEYCFSPTAEEAITDFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQI KFRDE+RPRFGVMR+REFLMKDAYSF ++ E Y M + Sbjct: 121 ELSSYKQLPVNFYQIHTKFRDEIRPRFGVMRAREFLMKDAYSFHVSDEDLAREYENMKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y+R+F RLGL+ ++A+SG IGGD S EF VLAD+GE Sbjct: 181 YIRVFGRLGLEFRAVQADSGAIGGDASQEFHVLADSGE 218 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 94/181 (51%), Gaps = 4/181 (2%) Query: 259 TSDVHNEKLFDSLPENKRVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D + + ARGIEVGH+F G KYS M T +GK MG Y Sbjct: 381 VADIRNVVAGDRAADGGEIRLARGIEVGHVFQLGRKYSQAMGFTVLDENGKAVVPAMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS--LINIKAHDQVCRDACEKIYARLSKV 375 GIG R+VAA IE +HD GI+WP +AP+ ++ +IN K QV +A E + L Sbjct: 441 GIGVSRIVAAAIEQNHDEAGIVWPVPMAPWTVAVCVINPKKDAQV-DEAAESLLVELQAA 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G D DD G + G FA +L+G P +V+V ++ + E + R G E + +++ Sbjct: 500 GIDAVLDDRGLRPGPMFADMELIGIPHRVVVSARGLEAGTYEYRARSGGEAEALDRAQLL 559 Query: 436 N 436 Sbjct: 560 E 560 >gi|330720665|gb|EGG98912.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC2047] Length = 576 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 116/218 (53%), Positives = 156/218 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++ + L+E+P DA + SHKLMLR GMI + + G+Y+W PLG + L IIREE Sbjct: 1 MRATQFPINTLKESPADAAVISHKLMLRAGMIRRLAAGLYTWSPLGLRVLRKSENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR+ +G E+LR+ DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRAGALELLMPAVQPAELWEETGRWGQFGDELLRVKDRHGREFCIGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE RPRFGVMRSREFLMKDAYSF L E + +Y+ M+ + Sbjct: 121 ELSSYKQLPVNFYQIQTKFRDERRPRFGVMRSREFLMKDAYSFHLDAESLQQTYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y R+F R+GL + A+SG IGG S EF VLA++GE Sbjct: 181 YCRVFERMGLVFRAVDADSGSIGGSQSQEFHVLAESGE 218 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 80/250 (32%), Positives = 130/250 (52%), Gaps = 33/250 (13%) Query: 200 GPIGGDL----SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD----DIISLNSIVEQ 251 GP+G D+ VLAD C + + N D D D+ + +VE Sbjct: 341 GPVGTDIPVIVDRSAAVLAD-----FICGANETGKHMTGVNWDRDCSITDVADIREVVEG 395 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 +P N KL V RGIEVGHIF G KY+ M+AT G+ Sbjct: 396 DPSPCG------NGKL---------VFKRGIEVGHIFQLGQKYAAAMNATVLNEKGQAQV 440 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIY 369 + MG YGIG RVVAA IE ++D GIIWP +APF++ ++ N +QV ++ ++Y Sbjct: 441 MTMGCYGIGVTRVVAAAIEQNNDDNGIIWPAGLAPFQVGIVPMNYDKSEQV-KETANRVY 499 Query: 370 ARLSKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 L ++G DV+ DD ++ G +FA DL+G P ++++ + + ++++E + R + R+ Sbjct: 500 QELKELGIDVYMDDRDKKTSPGVKFADMDLIGIPHRIVISDRGLKENQIEYQERRSQERQ 559 Query: 428 DMSLEEVINY 437 +++ ++VI + Sbjct: 560 NLAADQVIAF 569 >gi|309378830|emb|CBX22535.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 570 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 126/273 (46%), Positives = 175/273 (64%), Gaps = 9/273 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P + +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEVALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EVNSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHTDYASLQTTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSL 271 + L + A A VH N K DSL Sbjct: 237 PTLPLKG---ERAAAQAELVKVHTPNVKTIDSL 266 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A +KIYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDTV-REAADKIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRENEAQAVAIGEIV 561 >gi|302187169|ref|ZP_07263842.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642] Length = 571 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL D +++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDLHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFS 224 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 4/187 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ + R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETEAVREATDKLYADL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINY 437 + V+++ Sbjct: 558 VAGVLSF 564 >gi|319944615|ref|ZP_08018883.1| proline--tRNA ligase [Lautropia mirabilis ATCC 51599] gi|319742152|gb|EFV94571.1| proline--tRNA ligase [Lautropia mirabilis ATCC 51599] Length = 589 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 140/309 (45%), Positives = 185/309 (59%), Gaps = 17/309 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ + LP +E P DAE+ SHKLM R GMI + + GIY+++PLG + + + AIIREE Sbjct: 1 MKATALHLPTFKEAPADAEVVSHKLMTRAGMIRKLAGGIYTYMPLGLRVIRRIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE+ +P +Q A+LW+ESGR++ YG E+LR+ DR+ + + PT EEV+TD+ R Sbjct: 61 MDAAGAIELLMPVIQPAELWMESGRWEEYGPELLRIRDRHQRDFVIQPTSEEVVTDLARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP FY IQ KFRDE RPRFGVMR REF MKDAYSFD E + SY KMF + Sbjct: 121 DLRSYRQLPKNFYHIQTKFRDERRPRFGVMRGREFTMKDAYSFDRDSESALVSYRKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ + A++G IGG SHEF V+ADTGE D + S +D+ Sbjct: 181 YHRIFDRLGLQYRAVAADTGSIGGSASHEFQVIADTGE----------DALVYSTGSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLF-DSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I L V P AT + L + P R A E + T S+ +S Sbjct: 231 ANIELAEAV-----PLLATRMAPTQPLTRTATPGQARCEAVA-EYLKLPLDQTLKSIVLS 284 Query: 300 ATFKGADGK 308 GADG+ Sbjct: 285 TETPGADGQ 293 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 99/165 (60%), Gaps = 3/165 (1%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N + D P+ + A RGIEVGH+FY GTKYS M+ATF +G+ ++MG Y Sbjct: 401 ADIRNVQAGDPSPDGQGTLAIQRGIEVGHVFYLGTKYSQAMNATFIDENGQSKPLEMGCY 460 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 GIG R++ A IE +HD KGIIWP S+APF++ + + + R+A +++ A L G Sbjct: 461 GIGVTRLLGAAIEQNHDDKGIIWPASIAPFEVVVCPMGLERSEAVREAVDRLAADLQAAG 520 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 DD E+ G FA +L+G PL++ VG + + + +E+ R Sbjct: 521 IRYVVDDRNERPGVMFADWELIGVPLRITVGDRGLKEGLLELTVR 565 >gi|257453930|ref|ZP_05619207.1| prolyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] gi|257448702|gb|EEV23668.1| prolyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] Length = 586 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 119/245 (48%), Positives = 167/245 (68%), Gaps = 4/245 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DA+I S +LMLR GMI + + G+Y+WLP+G K L V IIREE Sbjct: 1 MRASQFTFATLKETPSDADIISSQLMLRAGMIRKSASGLYTWLPMGLKTLQKVKKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ +P +QSA+LW ESGR+++YG E+LR DR+ + + GPTHEEV+TDI R+ Sbjct: 61 MDAINCQELLMPVVQSAELWQESGRWEAYGPELLRFKDRHQRDFVLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP ++YQ+Q KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 LLKSYKQLPVSYYQVQTKFRDEIRPRFGVMRSREFIMKDAYSFHIDQPSLQRTYDDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE + F D + N + Sbjct: 181 YHNIFTRLGLDFRAVQADTGSIGGFASHEFQVLAGSGEDDIV----FSDSSAYAANIELA 236 Query: 241 DIISL 245 + ++L Sbjct: 237 EAVTL 241 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 85/152 (55%), Gaps = 12/152 (7%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KY+ ++ G GK MG YGIG R+VAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGDKYAKALNCAVMGEQGKPVITMMGCYGIGVTRIVAAAIEQNHDDNGII 466 Query: 340 WP-----DSVAPFKISLINI---KAHDQVCRDA---CEKIYARLSKVGCDVFWDDMGEQI 388 W +S+APF ++++ + K D A E +Y L G DV DD E+ Sbjct: 467 WKTSSTGESLAPFTVAIVPMIKGKMKDAATDKAMQLAEALYTELKAQGVDVLLDDRDERA 526 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 G +FA +L+G P ++++ K +S++ E+K+ Sbjct: 527 GVKFADLELIGIPHRIVISEKNISETG-EVKY 557 >gi|73662814|ref|YP_301595.1| prolyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|114152258|sp|Q49X48|SYP_STAS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|72495329|dbj|BAE18650.1| prolyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 566 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 113/225 (50%), Positives = 159/225 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P AE SH+L+L+ G+I Q + GIYS+LPL + L+N+ AI+REE Sbjct: 1 MKQSKVFIPTMKEVPAGAEALSHRLLLKAGLIKQSTSGIYSYLPLAARVLNNIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T I R Sbjct: 61 MERIDAVEILMPALQQAELWEESGRWSAYGPELMRLQDRNGREFALGPTHEEVVTSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REF+MKDAYSF + SY M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKYRDEKRPRFGLLRGREFIMKDAYSFHADEDSLDASYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + S+ Sbjct: 181 YGRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVYSE 225 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 73/166 (43%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLLMGCYGIGVSRTLSAIVEQNNDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SV PF + LI I R+ +++Y +L K DV +DD E+ G +F ADL+ Sbjct: 462 IWPKSVTPFDLHLITINPKKDDQRELADQLYTQL-KENYDVLYDDRKERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G P++V+VG K ++ VE+K R TG ED+ ++ +INY + +SN Sbjct: 521 GLPVRVVVG-KNAAEGIVEVKRRDTGESEDVHVDNLINYVNTLYSN 565 >gi|228922573|ref|ZP_04085873.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837002|gb|EEM82343.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 566 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 121/253 (47%), Positives = 166/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMIFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL++ GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSEVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|299529723|ref|ZP_07043160.1| prolyl-tRNA synthetase [Comamonas testosteroni S44] gi|298722586|gb|EFI63506.1| prolyl-tRNA synthetase [Comamonas testosteroni S44] Length = 580 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ + L+E P DAE+ SHKLM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFLISTLKEAPADAEVVSHKLMMRAGMIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE ++P +Q A+LW E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAIETTMPVVQPAELWQETGRFEKMGPELLRIQDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD + ++ SY M + Sbjct: 121 EFKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDKDRDAAQISYQTMREA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL+ +RA+SG IGGDLS EF V+A TGE V+C Sbjct: 181 YKRIFDRFGLQYRAVRADSGAIGGDLSEEFQVIASTGEDAIVYC 224 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D P+ A RGIE+GH+FY GTKYS M ATF G +GK + +M Sbjct: 390 AVVADLRNVVAGDRSPDGAGELAIERGIEIGHVFYLGTKYSKAMEATFLGDNGKPQHFEM 449 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLS 373 G YGIG R+ AA +E +HD +G+IWPD++APF + + I + + EK+Y L Sbjct: 450 GCYGIGVTRLPAAAVEQNHDERGMIWPDAIAPFTVVICPIGMGRSEAVKTEAEKLYGELL 509 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G DV DD E+ G+ A +L+G P +V++G + + + VE + R ++ E Sbjct: 510 ALGVDVILDDRDERPGAMLADWELIGVPHRVVLGDRGLKEGVVEYQQRRDTEATKLATNE 569 Query: 434 VINYASHRFS 443 V+ + R Sbjct: 570 VLAHLKSRLG 579 >gi|264676905|ref|YP_003276811.1| prolyl-tRNA synthetase [Comamonas testosteroni CNB-2] gi|262207417|gb|ACY31515.1| prolyl-tRNA synthetase [Comamonas testosteroni CNB-2] Length = 580 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ + L+E P DAE+ SHKLM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFLISTLKEAPADAEVVSHKLMMRAGMIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE ++P +Q A+LW E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAIETTMPVVQPAELWQETGRFEKMGPELLRIQDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD + ++ SY M + Sbjct: 121 EFKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDKDRDAAQISYQTMREA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL+ +RA+SG IGGDLS EF V+A TGE V+C Sbjct: 181 YKRIFDRFGLQYRAVRADSGAIGGDLSEEFQVIASTGEDAIVYC 224 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D P+ A RGIE+GH+FY GTKYS M ATF G +GK + +M Sbjct: 390 AVVADLRNVVAGDRSPDGAGELAIERGIEIGHVFYLGTKYSKAMEATFLGDNGKPQHFEM 449 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLS 373 G YGIG R+ AA +E +HD +G+IWPD++APF + + I + + EK+Y L Sbjct: 450 GCYGIGVTRLPAAAVEQNHDERGMIWPDAIAPFTVVICPIGMGRSEAVKTEAEKLYGELL 509 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G DV DD E+ G+ A +L+G P +V++G + + + VE + R ++ E Sbjct: 510 ALGVDVILDDRDERPGAMLADWELIGVPHRVVLGDRGLKEGVVEYQQRRDTEATKLATNE 569 Query: 434 VINYASHRFS 443 V+ + R Sbjct: 570 VLAHLKSRLG 579 >gi|146306290|ref|YP_001186755.1| prolyl-tRNA synthetase [Pseudomonas mendocina ymp] gi|166980142|sp|A4XRQ7|SYP_PSEMY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145574491|gb|ABP84023.1| prolyl-tRNA synthetase [Pseudomonas mendocina ymp] Length = 571 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 113/224 (50%), Positives = 158/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V ++REE Sbjct: 1 MRTSQFLLSTLKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR+ YG E+LR+ DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPAIQPAELWQESGRWVQYGPELLRVKDRHEREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +F RLGL P++A++G IGG SHEF VLA++GE + S Sbjct: 181 YCNVFSRLGLNFRPVQADTGSIGGTGSHEFHVLAESGEDDIAFS 224 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 4/193 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + RGIEVGHIF GTKYS M+ G +GK + Sbjct: 378 PLPTVADLRNVVAGDPSPDGQGTLEIKRGIEVGHIFQLGTKYSEAMNCQVLGENGKPVTL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE +HD +GI+W D++APF I+L+ ++ + R+A +K+YA L Sbjct: 438 TMGCYGIGVSRVVAAAIEQNHDERGILWNDALAPFHIALVPLRYETEQVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +V+V + +++ +E K R + + Sbjct: 498 TAAGYEVLLDDRDKKTSPGIKFADMELIGIPHRVVVSDRGLAEGNLEYKSRAETEAQAVP 557 Query: 431 LEEVINYASHRFS 443 L E++ + R S Sbjct: 558 LAEILPFLQARIS 570 >gi|238019359|ref|ZP_04599785.1| hypothetical protein VEIDISOL_01223 [Veillonella dispar ATCC 17748] gi|237864058|gb|EEP65348.1| hypothetical protein VEIDISOL_01223 [Veillonella dispar ATCC 17748] Length = 572 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M +K + P L+E P DA++ S +LMLR G + + + G+YS+LPLG +++ + AI+REE Sbjct: 1 MLATKLYAPTLREVPSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWRSIKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDNEFCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKDAYSFD+ G SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDAYSFDVDEAGLDESYKSMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y RIF R GL P+ A+SG IGG +HEF+ +A+ GE V+C+K Sbjct: 181 YTRIFTRCGLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTK 226 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 80/233 (34%), Positives = 118/233 (50%), Gaps = 24/233 (10%) Query: 201 PIGGDLSHEFIVLADTG--ETQVFCS----KDFMDFPI-PSENTDFDDII--SLNSIVEQ 251 P+G + EF ++ D ET C KD I P + + +DII + I + Sbjct: 334 PVGLKQTEEFAIVVDESVMETYNVCGGANKKDAHYININPKRDFNVEDIIVAPIRLITDD 393 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P + H A+GIEVG +F GTKYS + ATF +G+ + Sbjct: 394 DVCPTCGGTLEH---------------AKGIEVGQVFKLGTKYSEALQATFLDQNGRPNP 438 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + MG YGIG R +AA IE HD GIIWP ++APF+ ++ I A D+ + IY Sbjct: 439 MIMGCYGIGVSRTLAAAIEQYHDENGIIWPRAIAPFEAVIVPINAKDEALMSTSQTIYTA 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 L G DV DD ++ G +F ADL+G+PL++ V + +++VEI+ R +G Sbjct: 499 LQDAGVDVLLDDRKDRAGVKFKDADLIGYPLRITVSKNTLENNEVEIQIRKSG 551 >gi|300113463|ref|YP_003760038.1| prolyl-tRNA synthetase [Nitrosococcus watsonii C-113] gi|299539400|gb|ADJ27717.1| prolyl-tRNA synthetase [Nitrosococcus watsonii C-113] Length = 574 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 118/221 (53%), Positives = 156/221 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAEI SH+LMLR I + + G+Y+WLPLG + L V IIREE Sbjct: 1 MRTSQYLLTTTRETPADAEIISHQLMLRGSFIRRLAAGLYTWLPLGLRVLRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ +P +Q A+LW E+GR++ YG E+LR DR+ + +GPTHEEV+TD+ R Sbjct: 61 MDKAGAQEVLMPAVQPAELWRETGRWEQYGSELLRFTDRHQRFFCFGPTHEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQLKFRDE+RPRFGVMRSREFLMKDAYSF +Y++M+ + Sbjct: 121 EIQSYKQLPANFYQIQLKFRDEIRPRFGVMRSREFLMKDAYSFHTDQTSLGQTYHQMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R+GL ++A++G IGG SHEF VLA +GE + Sbjct: 181 YSCIFDRIGLTFRAVQADTGMIGGKTSHEFHVLATSGEDAI 221 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/173 (41%), Positives = 98/173 (56%), Gaps = 3/173 (1%) Query: 255 PYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P T+D+ N D P E ARGIEVGHIF G KYS M+AT G+ + Sbjct: 377 PEPTTADIRNVVDGDPSPDGEGTLSIARGIEVGHIFQLGKKYSQAMNATVLDEAGRAINL 436 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD GIIWP +APF+++L+ I AH V ++ +++Y Sbjct: 437 AMGCYGIGVSRVVAAAIEQNHDEHGIIWPAPIAPFQLALVPINAHKSVRVKEMSDQLYTE 496 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 L G +V DD + G FA DL+G P ++++ + + +S VE K R G Sbjct: 497 LQAAGFEVLLDDRQLRPGVIFADMDLIGIPHRLVISERGLENSTVEYKRRQDG 549 >gi|5911945|emb|CAB55948.1| hypothetical protein [Homo sapiens] Length = 409 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 142/401 (35%), Positives = 218/401 (54%), Gaps = 36/401 (8%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 S +LML+ G+I+ S G Y LP +A++ + +I +E G ++++P+L A+LW Sbjct: 4 SQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAELWQ 63 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPFTFYQIQLKFR 140 + R+D GKE+LRL DR+ K GPTHEE +T + S K SY+ LPF YQ+ KFR Sbjct: 64 ATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKFR 123 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 DE RPRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F++LGL + ++A+ G Sbjct: 124 DEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLGLPFVKVQADVG 183 Query: 201 PIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 IGG +SHEF + D GE ++ C + S N + D+ +N Q P T Sbjct: 184 TIGGTVSHEFQLPVDIGEDRLAICPRCSF-----SANMETLDLSQMNCPACQ--GPLTKT 236 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 +GIEVGH FY GTKYS +A F GK +MG YG+ Sbjct: 237 --------------------KGIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGL 276 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACEKIYARLS---- 373 G R++AA IE + WP +AP++ LI K + +Q + ++Y ++ Sbjct: 277 GVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEQAASELIGQLYDHITEAVP 336 Query: 374 KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 ++ +V DD IG++ A+ G+P +I G + + D Sbjct: 337 QLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALED 377 >gi|150015022|ref|YP_001307276.1| prolyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|189083493|sp|A6LPP0|SYP_CLOB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|149901487|gb|ABR32320.1| prolyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 570 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 123/226 (54%), Positives = 155/226 (68%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR GMI + + G+Y+++PLG K L V IIREE Sbjct: 1 MKMSNMLISTLREVPAEAEIDSHKLMLRAGMIRKMAAGVYNYMPLGLKVLKKVEDIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E + A+LW ESGR+D+YG EM RL DR D+ GPTHEEV TDI R+ Sbjct: 61 MNAAGAQEFLASAIIPAELWQESGRWDAYGAEMFRLKDRGDRDFCLGPTHEEVFTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD G +Y+KM + Sbjct: 121 EIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDKDQGGLDLAYDKMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y++IF+R GL + + A+SG IGG S EF+V ++ GE VFCS+ Sbjct: 181 YVKIFNRCGLDAKCVAADSGAIGGSNSAEFMVKSEVGEDDVVFCSE 226 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/168 (41%), Positives = 100/168 (59%), Gaps = 2/168 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARG EVGHIF GTKYS M+A F DGK+ MG YGIG R +A++IE HD GI Sbjct: 401 ARGTEVGHIFKLGTKYSEAMNAKFIDEDGKEKPFIMGCYGIGVTRTMASIIEQHHDENGI 460 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SVAP+ +S+I + D+ +IY +L+ G + DD E+ G +F ++L+ Sbjct: 461 VWPLSVAPYHVSVIPVNVKDEEQARIANEIYEKLTSAGIEALLDDRNERAGVKFKDSELM 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 G P+++ VG K ++D ++E K R G E + +E+V N F N+ Sbjct: 521 GIPMRITVGKK-INDGEIEFKLR-DGEMEVIKIEDVYNIIKGEFEKNK 566 >gi|148244484|ref|YP_001219178.1| prolyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] gi|166980170|sp|A5CX68|SYP_VESOH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146326311|dbj|BAF61454.1| prolyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] Length = 560 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 117/239 (48%), Positives = 164/239 (68%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ +K +P +E P DA+I SH+LM+R G+I + + G+YS+LP+G + L V IIR+E Sbjct: 1 MKTTKLLIPTQKEAPNDAKIISHQLMIRAGLISKLALGLYSYLPIGIRVLQKVENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA E+ +P +Q A+LW ESGR++ YG E+LR DR+ + GPTHEEV+T + R Sbjct: 61 MNKSGAQEVLMPIVQPAELWKESGRWNKYGAELLRFIDRHQREFCLGPTHEEVITHLARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY+ LP FYQIQ KFRDE+RPRFGV+R REF+MKDAYSF + + +Y M+ + Sbjct: 121 YLRSYKQLPMNFYQIQTKFRDEIRPRFGVIRMREFIMKDAYSFHIDEASLQETYEVMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y IF+RLGL + A+SG IGG+ SHEF VLAD+GE + C D D+ E F Sbjct: 181 YCNIFNRLGLNYRIVLADSGSIGGNTSHEFHVLADSGEDTI-CFSDKSDYAANIEKVTF 238 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 101/198 (51%), Gaps = 9/198 (4%) Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEV 284 DF + D+ +I +N W +D+ N D P+ K + RGIEV Sbjct: 347 LCDFVCGANECDYH-LIGVN-----WQGIKFIDADLRNAVDGDYSPDGKGKLMIKRGIEV 400 Query: 285 GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 GHIF GTKYS M A G GK MG YGIG R++AA IE +HD KGII+ ++ Sbjct: 401 GHIFQLGTKYSSVMKANVIGESGKAVTTTMGCYGIGVTRIIAAFIEQNHDDKGIIFSQAI 460 Query: 345 APFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ 403 APF+I ++ I + + +++Y + K DV DD E +G FA ++LLG P + Sbjct: 461 APFQIVIVPINYNKSTRVKALADRLYQQFIKASIDVLLDDRKEHVGIMFADSELLGIPHR 520 Query: 404 VIVGSKFVSDSKVEIKHR 421 +++ + VE K R Sbjct: 521 IVISDTHADNGSVEYKAR 538 >gi|300309711|ref|YP_003773803.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi|300072496|gb|ADJ61895.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] Length = 575 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MRASRFFISTLKEAPSDAEIVSHKLMMRAGMIKRLGAGIYTYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR++ G E++R+ DR+ + PT EEV+TD+ RS Sbjct: 61 MNRAGAVELLMPVVQPAELWQETGRWNKMGAELMRVKDRHGRDFAIQPTSEEVVTDVARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD +G K SY M+ + Sbjct: 121 ELRSYKQLPVNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDVDGLKKSYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y+RIF R GL+ + A++G IGG SHEF V+A TGE V+C Sbjct: 181 YVRIFTRFGLEFRAVAADNGAIGGSGSHEFHVVAATGEDALVYC 224 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 71/192 (36%), Positives = 108/192 (56%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K V A RGIEVGH+F GT YS M AT+ GK + Sbjct: 383 PEPLVADIRNVVEGDASPDGKGVLAIQRGIEVGHVFQLGTTYSEAMKATYLDEAGKPQPL 442 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D +GIIWP S+APF++ L + + + +K+YA+ Sbjct: 443 VMGCYGIGVTRILGAAIEQNFDDRGIIWPTSIAPFEVVLCPMGYDRSEAVKTEIDKLYAQ 502 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS+ G DV DD GE+ G+ FA +L+G P +++VG + + D +E + R + L Sbjct: 503 LSEAGVDVVLDDRGERPGAMFADWELIGVPHRIVVGDRGLKDGNIEYQGRRDTEATQVPL 562 Query: 432 EEVINYASHRFS 443 E + + + + Sbjct: 563 AEALAFIQGKLA 574 >gi|282850156|ref|ZP_06259535.1| proline--tRNA ligase [Veillonella parvula ATCC 17745] gi|282579649|gb|EFB85053.1| proline--tRNA ligase [Veillonella parvula ATCC 17745] Length = 572 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M +K + P L+E P DA++ S +LMLR G + + + G+YS+LPLG +++ + AI+REE Sbjct: 1 MLATKLYAPTLREVPSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWRSIKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDNEFCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKDAYSFD+ G SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDAYSFDVDEAGLDESYKSMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y RIF R GL P+ A+SG IGG +HEF+ +A+ GE V+C+K Sbjct: 181 YTRIFTRCGLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTK 226 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 97/166 (58%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG +F GTKYS + ATF +G+ + + MG YGIG R +AA IE HD GI Sbjct: 406 AKGIEVGQVFKLGTKYSEALQATFLDQNGRPNPMIMGCYGIGVSRTLAAAIEQYHDENGI 465 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP S+APF+ ++ I A D+ + IY L G DV DD ++ G +F ADL+ Sbjct: 466 IWPRSIAPFEAVIVPINAKDEALMSTSQTIYTALQNAGVDVLLDDRKDRAGVKFKDADLI 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G+PL++ V + +++VEI+ R +G +++ V + + N Sbjct: 526 GYPLRITVSKNTLENNEVEIQIRKSGEALPCAIDSVADKVTELLQN 571 >gi|294791808|ref|ZP_06756956.1| proline--tRNA ligase [Veillonella sp. 6_1_27] gi|294793669|ref|ZP_06758806.1| proline--tRNA ligase [Veillonella sp. 3_1_44] gi|294455239|gb|EFG23611.1| proline--tRNA ligase [Veillonella sp. 3_1_44] gi|294457038|gb|EFG25400.1| proline--tRNA ligase [Veillonella sp. 6_1_27] Length = 572 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M +K + P L+E P DA++ S +LMLR G + + + G+YS+LPLG +++ + AI+REE Sbjct: 1 MLATKLYAPTLREVPSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWRSIKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDNEFCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKDAYSFD+ G SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDAYSFDVDEAGLDESYKSMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y RIF R GL P+ A+SG IGG +HEF+ +A+ GE V+C+K Sbjct: 181 YTRIFTRCGLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTK 226 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 84/253 (33%), Positives = 125/253 (49%), Gaps = 24/253 (9%) Query: 201 PIGGDLSHEFIVLADTG--ETQVFCS----KDFMDFPI-PSENTDFDDII--SLNSIVEQ 251 PIG + EF ++ D ET C KD I P + + +DII + I + Sbjct: 334 PIGLKQTEEFAIVVDESVMETYNVCGGANKKDAHYVNINPKRDFNVEDIIVAPIRLITKD 393 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P + H A+GIEVG +F GTKYS + ATF +G+ + Sbjct: 394 DVCPKCGGALEH---------------AKGIEVGQVFKLGTKYSEALQATFLDQNGRPNP 438 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + MG YGIG R +AA IE HD GIIWP S+APF+ ++ I A D+ + IY Sbjct: 439 MIMGCYGIGVSRTLAAAIEQYHDENGIIWPRSIAPFEAVIVPINAKDEALMSTSQTIYTA 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD ++ G +F ADL+G+PL++ V + +++VEI+ R +G ++ Sbjct: 499 LQNAGVDVLLDDRKDRAGVKFKDADLIGYPLRITVSKNTLENNEVEIQIRKSGEALPCAI 558 Query: 432 EEVINYASHRFSN 444 + V + + N Sbjct: 559 DSVSDKVTELLQN 571 >gi|260914628|ref|ZP_05921094.1| proline-tRNA ligase [Pasteurella dagmatis ATCC 43325] gi|260631227|gb|EEX49412.1| proline-tRNA ligase [Pasteurella dagmatis ATCC 43325] Length = 571 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 121/245 (49%), Positives = 165/245 (67%), Gaps = 4/245 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P +A I SH+LMLR GMI + G+Y+WLP G + L+ V IIREE Sbjct: 1 MRTSQYLFSTLKETPAEASIVSHQLMLRAGMIRPLASGLYTWLPTGLRVLNKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA+E+ + Q A+LW ESGR++ YG E+LR DR D+ + GPT+EEV+TD+ R Sbjct: 61 MDKSGALEVKMAVTQPAELWQESGRWEEYGPELLRFKDRGDRDFVIGPTNEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY+ LP Y IQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ECASYKQLPLNLYHIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTTHECLQKTYDVMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISL 245 + ++L Sbjct: 237 EAVAL 241 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 117/193 (60%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M+AT +G DG+ + Sbjct: 379 PLPQIADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSAAMNATVQGEDGRPQTM 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YGIG RV+AA IE HD +GIIWP+++APFK++++ + H + + E++Y Sbjct: 439 IMGCYGIGVTRVIAAAIEQHHDERGIIWPENIAPFKVAIVPMNMHKSESVQQFAEELYRT 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V +DD E+ G FA +L+G P +++G K + ++E K+R +G +E ++ Sbjct: 499 LMAQGVEVIFDDRKERPGVMFADMELIGVPHMIVIGEKNLEKGEIEYKNRRSGEKEMIAK 558 Query: 432 EEVINYASHRFSN 444 E++++ +F+ Sbjct: 559 EQLLDVLKAKFNQ 571 >gi|329118470|ref|ZP_08247175.1| proline--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] gi|327465411|gb|EGF11691.1| proline--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] Length = 571 Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 118/231 (51%), Positives = 162/231 (70%), Gaps = 2/231 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASRFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+TDI R Sbjct: 61 MERAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEG-SKHSYNKMFV 179 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF E + Y M+ Sbjct: 121 EITSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYESLVRDGYQPMYD 180 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 +Y RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ Sbjct: 181 AYCRIFDRLGLNYRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDASDY 230 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 3/158 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KYS M+A F ++GK ++MG YGIG R+VAA IE ++DG+GI Sbjct: 405 ARGIEVGHVFQLRDKYSAAMNAAFLDSNGKSQIMEMGCYGIGITRIVAAAIEQNNDGRGI 464 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW D++APF+ ++ N K D V R+A +KIYA L G DV DD E+ G A ++ Sbjct: 465 IWTDAMAPFQAVIVPMNYKKSDAV-REAADKIYAELCAAGADVLLDDRDERAGVLLADSE 523 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 LLG P ++++G + + + KVE R + +++EE Sbjct: 524 LLGIPHRIVIGDRGLKEGKVEYARRTDSEAQSVAVEEA 561 >gi|74152256|dbj|BAE32409.1| unnamed protein product [Mus musculus] Length = 511 Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 146/412 (35%), Positives = 217/412 (52%), Gaps = 36/412 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L+ D S +LML+ G+I S G Y +P +A++ + +I +E G +++ Sbjct: 95 LEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKIN 154 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLP 129 +P+L A+LW + R+D G+E+LRL DR+ K GPTHEE +T + S K SY+ LP Sbjct: 155 MPSLSPAELWRATSRWDLMGRELLRLRDRHGKEYCLGPTHEEAVTALVASQKKLSYKQLP 214 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 YQ+ KFRDE RPRFG++R REF MKD Y+FD + E ++ +Y + +Y R+F RLG Sbjct: 215 LLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLG 274 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFDDIISLNSI 248 L+ + RA+ G IGG +SHEF + D GE + V C S NT+ D+ I Sbjct: 275 LRWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSCHF-----SANTEILDLS--QKI 327 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 P T +GIEVGH FY GTKYS +A F A G+ Sbjct: 328 CPDCQGPLTET--------------------KGIEVGHTFYLGTKYSSIFNALFTNAHGE 367 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACE 366 +MG YG+G R++AA IE I WP +AP+++ +I K + + + E Sbjct: 368 SLLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVE 427 Query: 367 KIY----ARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 K+Y + ++ +V DD IG++ A+ LG+P +I G + + D Sbjct: 428 KLYDDVMEAVPQLRGEVLLDDRTHLTIGNRLKDANKLGYPFVIIAGKRALED 479 >gi|73919762|sp|Q8CFI5|SYPM_MOUSE RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial; AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags: Precursor gi|24416455|gb|AAH38817.1| Prolyl-tRNA synthetase (mitochondrial)(putative) [Mus musculus] Length = 475 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 146/412 (35%), Positives = 217/412 (52%), Gaps = 36/412 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L+ D S +LML+ G+I S G Y +P +A++ + +I +E G +++ Sbjct: 59 LEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKIN 118 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLP 129 +P+L A+LW + R+D G+E+LRL DR+ K GPTHEE +T + S K SY+ LP Sbjct: 119 MPSLSPAELWRATSRWDLMGRELLRLRDRHGKEYCLGPTHEEAVTALVASQKKLSYKQLP 178 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 YQ+ KFRDE RPRFG++R REF MKD Y+FD + E ++ +Y + +Y R+F RLG Sbjct: 179 LLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLG 238 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFDDIISLNSI 248 L+ + RA+ G IGG +SHEF + D GE + V C S NT+ D+ I Sbjct: 239 LRWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSCHF-----SANTEILDLS--QKI 291 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 P T +GIEVGH FY GTKYS +A F A G+ Sbjct: 292 CPDCQGPLTET--------------------KGIEVGHTFYLGTKYSSIFNALFTNAHGE 331 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACE 366 +MG YG+G R++AA IE I WP +AP+++ +I K + + + E Sbjct: 332 SLLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVE 391 Query: 367 KIY----ARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 K+Y + ++ +V DD IG++ A+ LG+P +I G + + D Sbjct: 392 KLYDDVMEAVPQLRGEVLLDDRTHLTIGNRLKDANKLGYPFVIIAGKRALED 443 >gi|229134626|ref|ZP_04263436.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228648887|gb|EEL04912.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST196] Length = 566 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 165/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+++LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQASELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|229025259|ref|ZP_04181679.1| Prolyl-tRNA synthetase [Bacillus cereus AH1272] gi|228736012|gb|EEL86587.1| Prolyl-tRNA synthetase [Bacillus cereus AH1272] Length = 566 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 115/221 (52%), Positives = 155/221 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R GL + A+SG +GG +HEF+VL++ GE + Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSEVGEDTI 221 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|89344805|gb|ABD69008.1| prolyl-tRNA synthetase [Rhodoferax ferrireducens T118] Length = 600 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R GMI + GIYS +P+G + + V I+REE Sbjct: 21 MKASQFFISTLKEAPADAEVVSHKLMTRAGMIKKLGAGIYSLMPMGLRVVRKVEQIVREE 80 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR++S G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 81 MNRAGAVELVMPVVQPAELWQETGRFESNGPELLRIKDRHGRDFVVQPTSEEVVTDIARQ 140 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD +K SY M + Sbjct: 141 EIKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQASAKASYQVMAAA 200 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL + A+SG IGGDLS EF V+A TGE V+C Sbjct: 201 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC 244 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 74/168 (44%), Positives = 105/168 (62%), Gaps = 3/168 (1%) Query: 257 AATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D+ P+ + V A RGIE+GH+FY GTKYS M+ATF +GK +++M Sbjct: 410 ALVADLRNVVAGDASPDGQGVLAIERGIEIGHVFYLGTKYSQAMNATFLDVNGKPQFMEM 469 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLS 373 G YGIG R+ AA IE +HD +GIIWPD++APF + L I + A +K+YA L Sbjct: 470 GCYGIGITRLPAAAIEQNHDERGIIWPDALAPFTVVLCPISPERFPDVKAASDKLYAELL 529 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD GE+ G+ FA +L+G P +V +G + + +VE +HR Sbjct: 530 AAGVDVILDDRGERPGAMFADWELIGVPHRVTIGDRGLKAGEVEYQHR 577 >gi|163941557|ref|YP_001646441.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|226731430|sp|A9VT57|SYP_BACWK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|163863754|gb|ABY44813.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] Length = 566 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 165/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+++LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQASELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 72/162 (44%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SVAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKSVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|257792203|ref|YP_003182809.1| prolyl-tRNA synthetase [Eggerthella lenta DSM 2243] gi|257476100|gb|ACV56420.1| prolyl-tRNA synthetase [Eggerthella lenta DSM 2243] Length = 578 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 124/285 (43%), Positives = 185/285 (64%), Gaps = 15/285 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+E+P DAEIASH+L+LR G I + + G+Y++LPLG++ L V I+REE Sbjct: 1 MRMSQLYAPTLKEDPADAEIASHRLLLRAGFIRKTASGVYTFLPLGKRVLAKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P LQ +LW ESGR++ YG E++RL DR+D+ GPTHEE++T + R+ Sbjct: 61 MDGIGAQEIMMPALQPGELWHESGRWNDYGPELMRLVDRHDREFCLGPTHEELITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP + YQIQ+KFRDE+RPRFG++RSREF+MKDAYSF E + +Y+ M + Sbjct: 121 ELRSYKELPLSLYQIQVKFRDEIRPRFGLLRSREFIMKDAYSFHADQESLQKTYDDMSEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDF 239 Y RI R+G+ P+ A+ G IGG ++ EF+ LA+ GE + V C+ + + NT+ Sbjct: 181 YGRICDRMGMDYRPVEADPGQIGGSVTCEFMALAEAGEAELVHCTCGY------AANTEA 234 Query: 240 DDIISLNSIVEQWTAPY--AATSDVHN---EKLFDSLPENKRVSA 279 D ++ ++ + P AT VH F +PE+ V A Sbjct: 235 GDCLARPTV---YDVPMEKVATPGVHTIAELAAFLDIPESSTVKA 276 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 72/169 (42%), Positives = 103/169 (60%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 ARGIEV +F G KYS M ATF DG + MG YG+G R +AA++E +D G Sbjct: 396 GARGIEVSQVFQLGDKYSKAMGATFMAEDGSEQPFLMGCYGVGISRTMAAIVEQHNDENG 455 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I+WP +VAP + +I + D + A EK+ + L+K+G +V DD E+ G +FA ADL Sbjct: 456 IMWPLTVAPAHVCVIPLTVGDDEVQPAAEKLASDLAKLGLEVVIDDRKERAGVKFADADL 515 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +G+PLQVIVG + +++ KVEIK R TG R D+ L + + + N + Sbjct: 516 IGWPLQVIVGKRGLAEQKVEIKRRSTGARRDIPLAALTDALAFSQRNAK 564 >gi|162289255|ref|YP_522539.2| prolyl-tRNA synthetase [Rhodoferax ferrireducens T118] gi|114152240|sp|Q21YZ5|SYP_RHOFD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 580 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R GMI + GIYS +P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMTRAGMIKKLGAGIYSLMPMGLRVVRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR++S G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVELVMPVVQPAELWQETGRFESNGPELLRIKDRHGRDFVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD +K SY M + Sbjct: 121 EIKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQASAKASYQVMAAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL + A+SG IGGDLS EF V+A TGE V+C Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC 224 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 74/168 (44%), Positives = 105/168 (62%), Gaps = 3/168 (1%) Query: 257 AATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D+ P+ + V A RGIE+GH+FY GTKYS M+ATF +GK +++M Sbjct: 390 ALVADLRNVVAGDASPDGQGVLAIERGIEIGHVFYLGTKYSQAMNATFLDVNGKPQFMEM 449 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLS 373 G YGIG R+ AA IE +HD +GIIWPD++APF + L I + A +K+YA L Sbjct: 450 GCYGIGITRLPAAAIEQNHDERGIIWPDALAPFTVVLCPISPERFPDVKAASDKLYAELL 509 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD GE+ G+ FA +L+G P +V +G + + +VE +HR Sbjct: 510 AAGVDVILDDRGERPGAMFADWELIGVPHRVTIGDRGLKAGEVEYQHR 557 >gi|229174485|ref|ZP_04302017.1| Prolyl-tRNA synthetase [Bacillus cereus MM3] gi|228609045|gb|EEK66335.1| Prolyl-tRNA synthetase [Bacillus cereus MM3] Length = 566 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 115/221 (52%), Positives = 155/221 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R GL + A+SG +GG +HEF+VL++ GE + Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSEVGEDTI 221 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|229013002|ref|ZP_04170167.1| Prolyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|228748256|gb|EEL98116.1| Prolyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 566 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 122/253 (48%), Positives = 165/253 (65%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+++LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQASELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 98/162 (60%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SVAPF + +I + R+ IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKSVAPFHVHVIPVNMKSDAQREMGGNIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|15603235|ref|NP_246309.1| prolyl-tRNA synthetase [Pasteurella multocida subsp. multocida str. Pm70] gi|81856712|sp|Q9CL72|SYP_PASMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|12721741|gb|AAK03454.1| ProS [Pasteurella multocida subsp. multocida str. Pm70] Length = 571 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 120/245 (48%), Positives = 166/245 (67%), Gaps = 4/245 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P +A I SH+LMLR GMI + G+Y+WLP G + L+ V IIREE Sbjct: 1 MRTSQYLFSTLKETPAEASIVSHQLMLRAGMIRPLASGLYTWLPTGLRVLNKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA+E+ + Q A+LW ESGR++ YG E+LR DR ++ + GPT+EEV+TD+ R Sbjct: 61 MDKSGALEVKMAVTQPAELWQESGRWEEYGPELLRFKDRGERDFVIGPTNEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP Y IQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLYHIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTTHECLQKTYDVMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF+RLGL ++A++G IGG SHEF VLA +GE V S + DF + N + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSTE-SDF---AANIELA 236 Query: 241 DIISL 245 + ++L Sbjct: 237 EAVAL 241 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 119/193 (61%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M+AT +G DG+ + Sbjct: 379 PVPHIADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSAAMNATVQGEDGRPQTM 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 MG YGIG RV+AA IE HD +GIIWPD++APFK++++ + H + + E++Y Sbjct: 439 IMGCYGIGVTRVIAAAIEQHHDERGIIWPDNIAPFKVAIVPMNMHKSESVQQFAEELYRT 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G +V +DD E+ G FA +L+G P +++G K + ++E K+R +G +E ++ Sbjct: 499 LTAQGVEVIFDDRKERPGVMFADMELIGVPHMIVIGEKNLEKGEIEYKYRRSGEKEMIAK 558 Query: 432 EEVINYASHRFSN 444 +++++ +F++ Sbjct: 559 DQLLDVLKAKFAS 571 >gi|182420015|ref|ZP_02951249.1| prolyl-tRNA synthetase [Clostridium butyricum 5521] gi|237666786|ref|ZP_04526771.1| proline--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376052|gb|EDT73639.1| prolyl-tRNA synthetase [Clostridium butyricum 5521] gi|237657985|gb|EEP55540.1| proline--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 570 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 122/226 (53%), Positives = 155/226 (68%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR GMI + + GIY+++PLG K L NV I+REE Sbjct: 1 MKMSNMLISTLREVPAEAEIDSHKLMLRAGMIRKMAAGIYNYMPLGLKVLKNVEDIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E + A+LW ESGR+D+YG EM R+ DR + GPTHEEV TDI R+ Sbjct: 61 MNAAGAQEFLASAMIPAELWQESGRWDAYGAEMFRVKDRGARDFCLGPTHEEVFTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD +G +NKM + Sbjct: 121 EIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDAYSFDKDQDGLDIVFNKMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y++IF+R GL + + A+SG IGG S EF+V ++ GE VFCS+ Sbjct: 181 YVKIFNRCGLDAKCVEADSGAIGGSNSAEFMVKSEVGEDDVVFCSE 226 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 72/167 (43%), Positives = 99/167 (59%), Gaps = 2/167 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARG EVGHIF GTKYS M+A F DGK+ MG YGIG R +A++IE HD GI Sbjct: 401 ARGTEVGHIFKLGTKYSDAMNANFIDEDGKEKPFVMGCYGIGVTRTMASIIEQHHDENGI 460 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAP+ IS+I + D+ ++Y +L +G +V DD E+ G +F ++L+ Sbjct: 461 IWPLSVAPYHISVIPVNVKDEEQVKIATELYDQLFSMGVEVLLDDRNERAGVKFKDSELM 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G P++V VG K ++D +VE K R G E + + +V N F N Sbjct: 521 GIPMRVTVGKK-ITDGEVEFKLR-DGDMEVIKISDVCNIVKGEFEKN 565 >gi|296208047|ref|XP_002750943.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Callithrix jacchus] Length = 475 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 144/407 (35%), Positives = 217/407 (53%), Gaps = 38/407 (9%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D S +LML+ G+I+ S G Y LP +A++ + +I +E G ++++P+L Sbjct: 65 DLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQVIGGQKVNMPSLSP 124 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPFTFYQI 135 A+LW + R+D GKE+LRL DR+ K GPTHEE +T + S K SY+ LPF YQ+ Sbjct: 125 AELWQATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQV 184 Query: 136 QLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 KFRDE RPRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F+RLGL+ + + Sbjct: 185 TRKFRDEPRPRFGLLRCREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNRLGLRFVKV 244 Query: 196 RAESGPIGGDLSHEFIVLADTGE--TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 +A G IGG +SHEF + D GE + S F S N + D+ +N Q Sbjct: 245 QANVGSIGGTMSHEFQLPMDIGEDWLAICPSCSF------SANMETLDVSQMNCPACQ-- 296 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 P T +GIEVGH FY GTKYS +A F GK + Sbjct: 297 GPLTKT--------------------KGIEVGHTFYLGTKYSSIFNAQFTNVYGKPSLAE 336 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACEKIYAR 371 MG YG+G R++AA IE + WP +AP++ LI K + ++ + ++Y Sbjct: 337 MGCYGLGVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEEAASELAGQLYDH 396 Query: 372 LS----KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 ++ ++ +V DD IG++ A G+P +I G + + D Sbjct: 397 ITEAVPQLHGEVLLDDRTHLTIGNRLKDASKFGYPFVIIAGKRALED 443 >gi|194014474|ref|ZP_03053091.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194013500|gb|EDW23065.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 565 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 159/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DAE SH+L++R G I Q++ GIY +LPL K + ++ +I+R+E Sbjct: 1 MRQSLTFIPTLREVPADAEAKSHQLLVRAGFIRQNTSGIYHYLPLAHKVIQHIQSIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P LQ A++W ESGR+ +YG E++R+ DR+ + GPTHEEV+T + RS Sbjct: 61 MEKAGAAELLMPVLQQAEMWQESGRWYTYGPELMRMKDRHGREFALGPTHEEVITSLVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF +PE +YNKMF + Sbjct: 121 EVKSYKKLPLTLYQIQSKFRDEQRPRFGLLRGREFIMKDAYSFHSSPESLDDTYNKMFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +F ++GL P+ A+SG +GG +HEF+ L++ GE + S Sbjct: 181 YSNVFSKVGLNFRPVIADSGAMGGKDTHEFMALSEVGEDTIAYS 224 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 102/159 (64%), Gaps = 1/159 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG +F GT+YS M AT+ +G+ + MG YGIG R ++A++E HD KGI Sbjct: 404 AKGIEVGQVFKLGTRYSESMDATYLDENGRAQPMIMGCYGIGISRTLSAIVEQHHDEKGI 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP++VAP+ + L+ + + ++ E +Y RL G DV +DD E+ G +FA +DL+ Sbjct: 464 IWPEAVAPYDLHLLALNMKNDAQKELAETLYERLEDEGFDVLFDDRQERAGVKFADSDLI 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P+++ G K + VE+K R +G ++S++E+I++ Sbjct: 524 GLPIRISCG-KRSEEGIVEVKFRKSGESHEVSVDELISF 561 >gi|59800999|ref|YP_207711.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] gi|81311217|sp|Q5F938|SYP_NEIG1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|59717894|gb|AAW89299.1| putative prolyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] Length = 570 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 126/275 (45%), Positives = 178/275 (64%), Gaps = 9/275 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + RIF RLGL P+ A++G IGG SHEF VLA++GE V D D+ + N + Sbjct: 181 HCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE-DVIAYSDTSDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVH--NEKLFDSLPE 273 + L + A A + VH N K +SL E Sbjct: 237 PTLPLKG---ERAAAQAVLTKVHTPNVKTIESLVE 268 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW ++APF++ ++ N K D V R+A ++IYA L G DV DD E+ G ++ Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDTV-REAADRIYAELLAAGADVLLDDRDERAGVLLNDSE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P ++++G + + + VE R + +++ E++ Sbjct: 523 LLGIPHRIVIGDRALKEGNVEYAERRGNEAQAVAIGEIV 561 >gi|148698861|gb|EDL30808.1| prolyl-tRNA synthetase (mitochondrial)(putative), isoform CRA_a [Mus musculus] gi|148698862|gb|EDL30809.1| prolyl-tRNA synthetase (mitochondrial)(putative), isoform CRA_a [Mus musculus] Length = 475 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 146/412 (35%), Positives = 217/412 (52%), Gaps = 36/412 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L+ D S +LML+ G+I S G Y +P +A++ + +I +E G +++ Sbjct: 59 LEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKIN 118 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLP 129 +P+L A+LW + R+D G+E+LRL DR+ K GPTHEE +T + S K SY+ LP Sbjct: 119 MPSLSPAELWRATSRWDLMGRELLRLRDRHGKEYCLGPTHEEAVTALVASQKKLSYKQLP 178 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 YQ+ KFRDE RPRFG++R REF MKD Y+FD + E ++ +Y + +Y R+F RLG Sbjct: 179 LLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLG 238 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFDDIISLNSI 248 L+ + RA+ G IGG +SHEF + D GE + V C S NT+ D+ I Sbjct: 239 LQWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSCHF-----SANTEILDLS--QKI 291 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 P T +GIEVGH FY GTKYS +A F A G+ Sbjct: 292 CPDCQGPLTET--------------------KGIEVGHTFYLGTKYSSIFNALFTNAHGE 331 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACE 366 +MG YG+G R++AA IE I WP +AP+++ +I K + + + E Sbjct: 332 SLLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVE 391 Query: 367 KIY----ARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 K+Y + ++ +V DD IG++ A+ LG+P +I G + + D Sbjct: 392 KLYDDVMEAVPQLRGEVLLDDRTHLTIGNRLKDANKLGYPFVIIAGKRALED 443 >gi|221068963|ref|ZP_03545068.1| prolyl-tRNA synthetase [Comamonas testosteroni KF-1] gi|220713986|gb|EED69354.1| prolyl-tRNA synthetase [Comamonas testosteroni KF-1] Length = 580 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ +++ + L+E P DAE+ SHKLM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MKATQFLISTLKEAPADAEVVSHKLMMRAGMIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE ++P +Q A+LW E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAIETTMPVVQPAELWQETGRFEKMGPELLRIQDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD + ++ SY M + Sbjct: 121 EFKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDKDRDAAQISYQTMREA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL+ +RA+SG IGGDLS EF V+A TGE V+C Sbjct: 181 YKRIFDRFGLQYRAVRADSGAIGGDLSEEFQVIASTGEDAIVYC 224 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D P+ A RGIE+GH+FY GTKYS M ATF G +GK + +M Sbjct: 390 AVVADLRNVVAGDRSPDGAGELAIERGIEIGHVFYLGTKYSKAMDATFLGDNGKPQHFEM 449 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLS 373 G YGIG R+ AA +E +HD +G+IWPD++APF + + I + + EK+Y L Sbjct: 450 GCYGIGVTRLPAAAVEQNHDERGMIWPDAIAPFTVVICPIGMGRSEAVKTEAEKLYGELL 509 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G DV DD E+ G+ A +L+G P +V++G + + + VE + R ++ E Sbjct: 510 ALGVDVILDDRDERPGAMLADWELIGVPHRVVLGDRGLKEGVVEYQQRRDTEATKLATNE 569 Query: 434 VINYASHRFS 443 V+ + R Sbjct: 570 VLGHLKSRLG 579 >gi|326795786|ref|YP_004313606.1| prolyl-tRNA synthetase [Marinomonas mediterranea MMB-1] gi|326546550|gb|ADZ91770.1| Prolyl-tRNA synthetase [Marinomonas mediterranea MMB-1] Length = 577 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 122/265 (46%), Positives = 173/265 (65%), Gaps = 10/265 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L++ P DA + SH+LM+R GMI Q SKG+Y+WLP G + L V I+R+E Sbjct: 1 MRASNYLFSTLRDAPTDAVVTSHQLMVRAGMIRQISKGLYTWLPTGLRVLKKVENIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR+ YG E+LR+ DR+++ GPTHEEV+T++ R+ Sbjct: 61 MEKAGALEVMMPGVQPAELWEESGRWQKYGPELLRMKDRHNRDYCLGPTHEEVITELARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M + Sbjct: 121 ELTSYKQLPINFFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHSNSDSLRQTYDVMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F R+GL P++A++G IGG SHEF VLA +GE D + F S++++F Sbjct: 181 YCNVFDRIGLDYRPVQADTGSIGGAYSHEFHVLAQSGE-------DDIAF---SDSSEFA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 + L V +P T +V E Sbjct: 231 ANVELAEAVCSKKSPDTPTQEVSEE 255 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 74/190 (38%), Positives = 109/190 (57%), Gaps = 3/190 (1%) Query: 259 TSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T D+ N D P E V RGIEVGHIF G +YS + A+ +GK + MG Sbjct: 388 TKDIRNVVEGDPSPDGEGHIVIKRGIEVGHIFQLGQQYSEALRASVLDENGKAQTMWMGC 447 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+VAA IE + D KGI+WP+S+ PF +++I + + RD C+ +Y L ++ Sbjct: 448 YGIGVSRIVAAAIEQNFDDKGILWPESITPFSVAIIAMNYDKSEAVRDECDHLYNELKQL 507 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G +FA +LLG P +++VG K + ++ +E K+R TG ED+ +E + Sbjct: 508 GIDVLLDDRKERPGVKFADCELLGIPHRLVVGDKGLKNNSLEYKYRKTGEGEDVPKDEAV 567 Query: 436 NYASHRFSNN 445 + N Sbjct: 568 KFIRKVLQAN 577 >gi|317490123|ref|ZP_07948612.1| prolyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|325833438|ref|ZP_08165887.1| proline--tRNA ligase [Eggerthella sp. HGA1] gi|316910828|gb|EFV32448.1| prolyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|325485362|gb|EGC87831.1| proline--tRNA ligase [Eggerthella sp. HGA1] Length = 584 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 124/285 (43%), Positives = 185/285 (64%), Gaps = 15/285 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+E+P DAEIASH+L+LR G I + + G+Y++LPLG++ L V I+REE Sbjct: 7 MRMSQLYAPTLKEDPADAEIASHRLLLRAGFIRKTASGVYTFLPLGKRVLAKVENIVREE 66 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P LQ +LW ESGR++ YG E++RL DR+D+ GPTHEE++T + R+ Sbjct: 67 MDGIGAQEIMMPALQPGELWHESGRWNDYGPELMRLVDRHDREFCLGPTHEELITSLVRN 126 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP + YQIQ+KFRDE+RPRFG++RSREF+MKDAYSF E + +Y+ M + Sbjct: 127 ELRSYKELPLSLYQIQVKFRDEIRPRFGLLRSREFIMKDAYSFHADQESLQKTYDDMSEA 186 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDF 239 Y RI R+G+ P+ A+ G IGG ++ EF+ LA+ GE + V C+ + + NT+ Sbjct: 187 YGRICDRMGMDYRPVEADPGQIGGSVTCEFMALAEAGEAELVHCTCGY------AANTEA 240 Query: 240 DDIISLNSIVEQWTAPY--AATSDVHN---EKLFDSLPENKRVSA 279 D ++ ++ + P AT VH F +PE+ V A Sbjct: 241 GDCLARPTV---YDVPMEKVATPGVHTIAELAAFLDIPESSTVKA 282 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 72/169 (42%), Positives = 103/169 (60%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 ARGIEV +F G KYS M ATF DG + MG YG+G R +AA++E +D G Sbjct: 402 GARGIEVSQVFQLGDKYSKAMGATFMAEDGSEQPFLMGCYGVGISRTMAAIVEQHNDENG 461 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I+WP +VAP + +I + D + A EK+ + L+K+G +V DD E+ G +FA ADL Sbjct: 462 IMWPLTVAPAHVCVIPLTVGDDEVQPAAEKLASDLAKLGLEVVIDDRKERAGVKFADADL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +G+PLQVIVG + +++ KVEIK R TG R D+ L + + + N + Sbjct: 522 IGWPLQVIVGKRGLAEQKVEIKRRSTGARRDIPLAALTDALAFSQRNAK 570 >gi|229168558|ref|ZP_04296281.1| Prolyl-tRNA synthetase [Bacillus cereus AH621] gi|228614964|gb|EEK72066.1| Prolyl-tRNA synthetase [Bacillus cereus AH621] Length = 566 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 116/221 (52%), Positives = 154/221 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+++LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQASELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R GL + A+SG +GG +HEF+VL+D GE + Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTI 221 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 72/162 (44%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SVAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKSVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|157692336|ref|YP_001486798.1| prolyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|166980100|sp|A8FDC1|SYP_BACP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157681094|gb|ABV62238.1| proline--tRNA ligase [Bacillus pumilus SAFR-032] Length = 565 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 159/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DAE SH+L++R G I Q++ GIY +LPL K + ++ +I+R+E Sbjct: 1 MRQSLTFIPTLREVPADAEAKSHQLLVRAGFIRQNTSGIYHYLPLAHKVIQHIQSIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P LQ A++W ESGR+ +YG E++R+ DR+ + GPTHEEV+T + RS Sbjct: 61 MEKAGAAELLMPVLQQAEMWQESGRWYTYGPELMRMKDRHGREFALGPTHEEVITSLVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF +PE +YNKMF + Sbjct: 121 EVKSYKKLPLTLYQIQSKFRDEQRPRFGLLRGREFIMKDAYSFHSSPESLDDTYNKMFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +F ++GL P+ A+SG +GG +HEF+ L++ GE + S Sbjct: 181 YSNVFSKVGLNFRPVIADSGAMGGKDTHEFMALSEVGEDTIAYS 224 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 102/159 (64%), Gaps = 1/159 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG +F GT+YS M AT+ +G+ + MG YGIG R ++A++E HD KGI Sbjct: 404 AKGIEVGQVFKLGTRYSESMDATYLDENGRAQPMIMGCYGIGISRTLSAIVEQHHDEKGI 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP++VAP+ + L+ + + ++ E +Y RL G DV +DD E+ G +FA +DL+ Sbjct: 464 IWPEAVAPYDLHLLALNMKNDAQKELAETLYERLENEGFDVLFDDRQERAGVKFADSDLI 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P+++ G K + VE+K R +G ++S++E+I++ Sbjct: 524 GLPIRISCG-KRSEEGIVEVKFRKSGESHEVSVDELISF 561 >gi|258516344|ref|YP_003192566.1| prolyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257780049|gb|ACV63943.1| prolyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 572 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 113/227 (49%), Positives = 158/227 (69%), Gaps = 1/227 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AE+ SHKL+LR G I + + G+Y++LPL Q+ L + I+REE Sbjct: 1 MRASQLLIPTLRETPAEAEVISHKLLLRAGYIRRSAAGVYTYLPLAQRVLSKIKRIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q A+LW ESGR+D YG E+ RL DR+ + GPTHEE++T + +S Sbjct: 61 MDRQGGQEILMPIMQPAELWQESGRWDVYGPELFRLKDRHGRDFALGPTHEEIITALVKS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE RPRFG++R REF+MKD YSFD G +Y KM+ + Sbjct: 121 ELSSYKQLPLLLYQIQNKYRDERRPRFGLLRGREFIMKDLYSFDADEAGLDITYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKD 226 Y+RIF R GL+ P+ A+SG IGG +HEF+VLA++GE VFC + Sbjct: 181 YVRIFQRCGLRFRPVEADSGAIGGSDTHEFMVLAESGEALVVFCQNE 227 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 96/159 (60%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG +F G KYS + ATF+ +GK + MG YGIG R +AA IE +D GI Sbjct: 403 AKGIEVGQVFKLGDKYSKSLEATFQDENGKTRHYVMGCYGIGVSRTMAAAIEQHNDLNGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF + ++ + DQ D E +Y + G +V DD E+ G +F ADL+ Sbjct: 463 TWPAAIAPFHLVIVPVNVKDQALMDISEVLYRSFLESGVEVVLDDRPERPGVKFKDADLV 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G+PL++ VG KF+ + +E++ R +G + EE++++ Sbjct: 523 GYPLRLTVGKKFLEEGLLELRERRSGKTHFLKEEEILSF 561 >gi|110801651|ref|YP_699687.1| prolyl-tRNA synthetase [Clostridium perfringens SM101] gi|123341520|sp|Q0SQC0|SYP_CLOPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|110682152|gb|ABG85522.1| prolyl-tRNA synthetase [Clostridium perfringens SM101] Length = 570 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 120/225 (53%), Positives = 155/225 (68%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR G++ + + GIY+++PLG K ++NV I+REE Sbjct: 1 MKMSNMLVGTLREVPAEAEIESHKLMLRAGLMRKMAAGIYNYMPLGLKVIENVKNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E L A+LW ESGR+D+YG EM RL DR+++ GPTHEEV TDI R+ Sbjct: 61 MNNAGAQEFLASALIPAELWQESGRWDAYGAEMFRLKDRHNRDFCLGPTHEEVFTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKD YSFD EG +Y KM + Sbjct: 121 EIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDGYSFDKDQEGLDLAYEKMRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 Y+ IF+R GL + + A+SG IGG S EF+V ++ GE VFC+ Sbjct: 181 YVNIFNRCGLDAKAVAADSGAIGGSGSAEFMVKSEVGEDDVVFCT 225 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 109/188 (57%), Gaps = 7/188 (3%) Query: 259 TSDVHNEKLFDSLPE-NKRVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D N + + PE K ++ +RG EVGHIF GTKYS M ATF DGK MG Sbjct: 379 VGDFRNVTIGEKCPECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDGKAKPFIMGC 438 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSK 374 YGIG R VA++IE +D GIIWP VAP+ +S+I N+K +Q + E+IY L K Sbjct: 439 YGIGVTRTVASIIEQHNDENGIIWPLEVAPYHVSVIPANVKNEEQATK--AEEIYNELRK 496 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G + DD E+ G +F ++L+G P+++ VG K + + +VE K R G E +S+EEV Sbjct: 497 MGVEALLDDRKERAGVKFKDSELMGIPMRITVG-KMIGEGQVEFKLRNGGEVETLSIEEV 555 Query: 435 INYASHRF 442 N F Sbjct: 556 YNRVRKEF 563 >gi|110799310|ref|YP_697117.1| prolyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|168211250|ref|ZP_02636875.1| prolyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|123049576|sp|Q0TMM3|SYP_CLOP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|110673957|gb|ABG82944.1| prolyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|170710790|gb|EDT22972.1| prolyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] Length = 570 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 120/225 (53%), Positives = 155/225 (68%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR G++ + + GIY+++PLG K ++NV I+REE Sbjct: 1 MKMSNMLVGTLREVPAEAEIESHKLMLRAGLMRKMAAGIYNYMPLGLKVIENVKNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E L A+LW ESGR+D+YG EM RL DR+++ GPTHEEV TDI R+ Sbjct: 61 MNNAGAQEFLASALIPAELWQESGRWDAYGAEMFRLKDRHNRDFCLGPTHEEVFTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKD YSFD EG +Y KM + Sbjct: 121 EIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDGYSFDKDQEGLDLAYEKMRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 Y+ IF+R GL + + A+SG IGG S EF+V ++ GE VFC+ Sbjct: 181 YVNIFNRCGLDAKAVAADSGAIGGSGSAEFMVKSEVGEDDVVFCT 225 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 109/188 (57%), Gaps = 7/188 (3%) Query: 259 TSDVHNEKLFDSLPE-NKRVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D N + + PE K ++ +RG EVGHIF GTKYS M ATF DGK MG Sbjct: 379 VGDFRNVTIGEKCPECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDGKAKPFIMGC 438 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSK 374 YGIG R VA++IE +D GIIWP VAP+ +S+I N+K +Q + E+IY L K Sbjct: 439 YGIGVTRTVASIIEQHNDENGIIWPLEVAPYHVSVIPANVKNEEQATK--AEEIYNELRK 496 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G + DD E+ G +F ++L+G P+++ VG K + + +VE K R G E +S+EEV Sbjct: 497 MGVEALLDDRKERAGVKFKDSELMGIPMRITVG-KMIGEGQVEFKLRNGGEVETLSIEEV 555 Query: 435 INYASHRF 442 N F Sbjct: 556 YNRVREEF 563 >gi|332286931|ref|YP_004418842.1| prolyl-tRNA synthetase [Pusillimonas sp. T7-7] gi|330430884|gb|AEC22218.1| prolyl-tRNA synthetase [Pusillimonas sp. T7-7] Length = 577 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 116/218 (53%), Positives = 156/218 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKY + L+E P +AE+ SH+LM R GMI + + GIY+++PLG K L + I+R+E Sbjct: 1 MHASKYHINTLKEAPAEAEVKSHQLMTRAGMIRKAAGGIYTYMPLGLKVLRKIENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GAIE+ +P +Q A+LWVESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MDQAGAIELLMPVVQPAELWVESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I S+R LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD ++ SY+ M+ + Sbjct: 121 EIHSWRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEASAQSSYDTMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y+RIF RLGL + A++G IGG SHEF V+ADTGE Sbjct: 181 YMRIFQRLGLTFRAVAADTGSIGGSRSHEFQVIADTGE 218 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 2/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 P A +D+ N D P+ +++ RGIEVGH+F+ G KYS ++ATF DGK +Q Sbjct: 385 PEATVADLRNVVAGDPDPQGGQLAIQRGIEVGHVFFLGDKYSKALNATFLETDGKPALLQ 444 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARL 372 MG YGIG R+ AA IE HD KGIIWP S+APF++ + + H + R+ E++Y L Sbjct: 445 MGCYGIGISRIAAAAIEQCHDEKGIIWPKSIAPFELVICPMGWHKSETVRNTAEELYQSL 504 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G +V DD + G FA +L+G PL++ +G + + + VEI+ R I +++ Sbjct: 505 KAQGVEVMLDDRDVRPGIMFADWELIGVPLRITIGDRGLKEGIVEIQARRQEITNKVAVA 564 Query: 433 EVINYA 438 + ++YA Sbjct: 565 DALDYA 570 >gi|291277468|ref|YP_003517240.1| prolyl-tRNA synthetase [Helicobacter mustelae 12198] gi|290964662|emb|CBG40517.1| prolyl-tRNA synthetase [Helicobacter mustelae 12198] Length = 577 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 120/239 (50%), Positives = 160/239 (66%), Gaps = 10/239 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYF+P L+ENP+DA + SH+ ++R G I Q GIY++LPLG+K L+ ++ IIREE Sbjct: 1 MRFSKYFIPTLKENPKDAVLKSHQYLVRGGFIEQIGSGIYNFLPLGKKVLEKISQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+EM+ + ++LW +SGRY+ YGKE+LR DR + + GPT EE +T++ ++ Sbjct: 61 MNEAGALEMAAGFVVPSELWKQSGRYEKYGKELLRFKDRRENEFVLGPTCEEALTNLAKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY++LP FYQI LKFRDE+RPRFG+MR REF+MKDAYSF E + M + Sbjct: 121 LIKSYKSLPLNFYQIHLKFRDEVRPRFGLMRGREFIMKDAYSFHANFEDLDREFENMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y RIF RLGL + A+SG IGG S EF+VLAD GE D + EN D+ Sbjct: 181 YCRIFTRLGLDFRVVDADSGAIGGSGSKEFMVLADCGE----------DIIVVCENCDY 229 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 1/152 (0%) Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 + + K +GIEVGHIF GTKYS M A F +GK MG YGIG R++ A++ Sbjct: 408 TCCDGKLTHKKGIEVGHIFKLGTKYSQAMQAVFLDQNGKSQAFVMGCYGIGVSRLLPAIL 467 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 E D G +W + APFK+ +I + + +++Y L + G DV DD E+ G Sbjct: 468 EQKSDALGCVWSSTTAPFKVVIIPSNKKNPSEVEFSQRLYENLLQRGVDVLLDDRDERFG 527 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +L+GF ++VG K + +VEI R Sbjct: 528 FKMKDFELIGFEFAIVVG-KELEGGRVEIFER 558 >gi|295706249|ref|YP_003599324.1| prolyl-tRNA synthetase [Bacillus megaterium DSM 319] gi|294803908|gb|ADF40974.1| prolyl-tRNA synthetase [Bacillus megaterium DSM 319] Length = 565 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 114/224 (50%), Positives = 157/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DA+I SH+L+LR G + Q+S G+YS+LPLG++ L V I+REE Sbjct: 1 MRQSSTLIPTLREVPADADIKSHQLLLRAGYMRQNSSGVYSFLPLGKRVLQKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G++E+ +P LQ A+LW ESGR+ SYG E++R+ DR+ + G THEEV+T + R Sbjct: 61 MDRAGSVELLMPALQQAELWQESGRWYSYGPELMRMKDRHGREFALGATHEEVITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E Y+KMF + Sbjct: 121 EVKSYKRLPLNLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASQESLDEVYDKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GL + A+SG +GG +HEF+VL++ GE + S Sbjct: 181 YSRIFERCGLNFRAVIADSGAMGGKDTHEFMVLSEIGEDTIAYS 224 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 99/158 (62%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVGH+F GT+YS M AT+ +G+ + MG YGIG R VAA+ E +D G+ Sbjct: 401 AKGIEVGHVFKLGTRYSEAMGATYLDENGRSQPMIMGCYGIGVSRTVAAIAEQFNDENGL 460 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP++V P+++ +I + + R+ EK+Y L +V DD E+ G +FA +DL+ Sbjct: 461 LWPEAVTPYQVHVIPVNVKNDEQRELGEKLYNELLDNRFEVLLDDRQERAGVKFADSDLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P++V VG K S+ VE+K R TG ++S++ +++ Sbjct: 521 GLPVRVTVG-KRASEGIVEVKVRKTGESLEVSVDNLVS 557 >gi|229815406|ref|ZP_04445738.1| hypothetical protein COLINT_02454 [Collinsella intestinalis DSM 13280] gi|229808939|gb|EEP44709.1| hypothetical protein COLINT_02454 [Collinsella intestinalis DSM 13280] Length = 569 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 161/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + P L+E+P +AE+ASH+LMLR GMI + + G+YS+LPL ++L + I+R+E Sbjct: 1 MKMSNLYAPTLKEDPAEAELASHRLMLRAGMIRKQAAGLYSYLPLAWRSLRKIEDIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + A +W ESGRY+ YG E++R++DR+++ + GPTHEE +TD+ ++ Sbjct: 61 MDAAGAQELLMPIMVDAQVWRESGRYNVYGPELMRISDRHEREFVLGPTHEETVTDLIKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF+ T E + +Y+ M + Sbjct: 121 ELKSYKQLPVNLYQIQDKFRDEMRPRFGLMRGREFIMKDGYSFNATQESLQETYDDMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y I R GLK++P+ A+SG IGGD S EF+ LAD GE V+C Sbjct: 181 YANICERCGLKALPVVADSGQIGGDTSVEFMALADAGEAALVYC 224 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 104/170 (61%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 ARGIEV +F GTKYS M ATF +G++ MG YG+G R +AA +E HD Sbjct: 399 AGARGIEVSQVFQLGTKYSEAMGATFADENGEEKPFLMGCYGVGVSRTLAASVEQHHDEN 458 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 GIIWP S+AP+++S++ + C + C+++ A L + G +V DD + G +FA D Sbjct: 459 GIIWPVSIAPYEVSIMPLDPTIPECAEVCDRLTAELCEAGIEVIVDDRDIRPGVKFADND 518 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 L+GFP Q+++G + + + VE+K R TG RED++++EV + + + R Sbjct: 519 LMGFPYQIVLGKRGLKNGTVELKDRATGEREDVAIDEVASKVADLVISQR 568 >gi|325915741|ref|ZP_08178043.1| prolyl-tRNA synthetase, family II [Xanthomonas vesicatoria ATCC 35937] gi|325538005|gb|EGD09699.1| prolyl-tRNA synthetase, family II [Xanthomonas vesicatoria ATCC 35937] Length = 564 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 115/218 (52%), Positives = 151/218 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L+++DR + Y PT EE D R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKISDRKQQEFCYSPTAEEAAADFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE Sbjct: 181 YTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIADSGE 218 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/153 (37%), Positives = 86/153 (56%), Gaps = 3/153 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +HD GI Sbjct: 402 ARGIEVGHVFQLGSQYAQALQATVIDESGKPAVLKMGCYGIGISRIVAAAIEQNHDDAGI 461 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +WP +AP++ + +IN K D A + + L G D DD G + G+ FA + Sbjct: 462 LWPAPMAPWQVVVCVINPK-QDAQVVAAAQALLDELLAAGLDAALDDRGLRPGAMFADME 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 LLG P +V+V + ++ E + R E++ Sbjct: 521 LLGIPHRVVVSERGLAAGTFEYRARTAEAAENL 553 >gi|126642843|ref|YP_001085827.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] Length = 546 Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 114/201 (56%), Positives = 149/201 (74%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP+G + L V+AI+REE NR+GA+E+ +P Q A LW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPASLWEESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 Y+ YG E+LR DR+D + GPTHEEV+TD+ R+ +KSY+ LP FYQIQ KFRDE+RP Sbjct: 61 YEQYGPELLRFKDRHDNPFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREF+MKDAYSF T E + +Y+ M+ +Y RIF RLGL P++A++G IGG Sbjct: 121 RFGVMRSREFIMKDAYSFHATQESLQETYDVMYDTYSRIFTRLGLDFRPVQADTGSIGGS 180 Query: 206 LSHEFIVLADTGETQVFCSKD 226 SHEF VLA +GE + S + Sbjct: 181 ASHEFHVLAASGEDDIAFSTE 201 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/157 (43%), Positives = 95/157 (60%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + G DGK V MG YGIG RVVAA IE ++D KGII Sbjct: 385 RGIEVGHIFQLGTKYSEALGCKVLGEDGKPFTVTMGCYGIGVTRVVAAAIEQNYDDKGII 444 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF+I+++ + AH +A E +YA L G DV DD E+ G +F+ +L+ Sbjct: 445 WPQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDVLLDDRNERPGVKFSDLELM 504 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++++G K + E K R +++ EE++ Sbjct: 505 GIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELL 541 >gi|18311410|ref|NP_563344.1| prolyl-tRNA synthetase [Clostridium perfringens str. 13] gi|168206822|ref|ZP_02632827.1| prolyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|168214717|ref|ZP_02640342.1| prolyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|168217921|ref|ZP_02643546.1| prolyl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|182626988|ref|ZP_02954718.1| prolyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|81849146|sp|Q8XHQ4|SYP_CLOPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|18146094|dbj|BAB82134.1| proline-tRNA ligase [Clostridium perfringens str. 13] gi|170661763|gb|EDT14446.1| prolyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|170713833|gb|EDT26015.1| prolyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|177907658|gb|EDT70282.1| prolyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|182380028|gb|EDT77507.1| prolyl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 570 Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 120/225 (53%), Positives = 155/225 (68%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR G++ + + GIY+++PLG K ++NV I+REE Sbjct: 1 MKMSNMLVGTLREVPAEAEIESHKLMLRAGLMRKMAAGIYNYMPLGLKVIENVKNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E L A+LW ESGR+D+YG EM RL DR+++ GPTHEEV TDI R+ Sbjct: 61 MNNAGAQEFLASALIPAELWQESGRWDAYGAEMFRLKDRHNRDFCLGPTHEEVFTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKD YSFD EG +Y KM + Sbjct: 121 EIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDGYSFDKDQEGLDLAYEKMRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 Y+ IF+R GL + + A+SG IGG S EF+V ++ GE VFC+ Sbjct: 181 YVNIFNRCGLDAKAVAADSGAIGGSGSAEFMVKSEVGEDDVVFCT 225 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 109/188 (57%), Gaps = 7/188 (3%) Query: 259 TSDVHNEKLFDSLPE-NKRVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D N + + PE K ++ +RG EVGHIF GTKYS M ATF DGK MG Sbjct: 379 VGDFRNVTIGEKCPECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDGKAKPFIMGC 438 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSK 374 YGIG R VA++IE +D GIIWP VAP+ +S+I N+K +Q + E+IY L K Sbjct: 439 YGIGVTRTVASIIEQHNDENGIIWPLEVAPYHVSVIPANVKNEEQATK--AEEIYNELRK 496 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G + DD E+ G +F ++L+G P+++ VG K + + +VE K R G E +S+EEV Sbjct: 497 MGVEALLDDRKERAGVKFKDSELMGIPMRITVG-KMIGEGQVEFKLRNGGEVETLSIEEV 555 Query: 435 INYASHRF 442 N F Sbjct: 556 YNRVREEF 563 >gi|289550945|ref|YP_003471849.1| Bacterial type prolyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|315658447|ref|ZP_07911319.1| proline--tRNA ligase [Staphylococcus lugdunensis M23590] gi|289180477|gb|ADC87722.1| Bacterial type prolyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|315496776|gb|EFU85099.1| proline--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 566 Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MRQSKVFIPTMREVPAEAEALSHQLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MERIDAVEILMPVLQQAELWEESGRWSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKRLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDATYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ P+ A+SG IGG+ +HEF+ L+ GE + S + Sbjct: 181 YGRIFKRVGINVRPVLADSGAIGGNHTHEFMALSKIGEDTIVYSNE 226 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 99/159 (62%), Gaps = 2/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GI Sbjct: 402 AEGIEVGQVFKLGTKYSEAMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP +V PF + LI + + + + +Y +L+ + DV +DD E+ G +F ADL+ Sbjct: 462 IWPKTVTPFDLHLITVNPKKEEQQSLADNLYEQLNGM-FDVLYDDRKERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P++++VG K ++ VE+K R TG ED+ +E++ Y Sbjct: 521 GLPIRIVVG-KQAAEGIVEVKVRRTGTSEDVHVEQLEQY 558 >gi|323441042|gb|EGA98749.1| prolyl-tRNA synthetase [Staphylococcus aureus O11] gi|323443911|gb|EGB01522.1| prolyl-tRNA synthetase [Staphylococcus aureus O46] Length = 567 Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 162/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEESLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|148887021|sp|Q0VRL1|SYP_ALCBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 572 Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 127/273 (46%), Positives = 174/273 (63%), Gaps = 9/273 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L ++E P DA + SH+LMLR GM+ + + G+Y+WLP G + L V +IREE Sbjct: 1 MRTSQYLLATVKETPADAVVTSHQLMLRAGMVRKLASGLYTWLPSGLRVLRKVEQVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q +LW ESGR +YG E+LR+ DR++ GPTHEEV+TD+ R+ Sbjct: 61 MDRAGAQEVLMPVVQPMELWEESGRAPAYGPELLRITDRHNNPFCLGPTHEEVITDMVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MRSREF+MKDAYSF + +Y M + Sbjct: 121 ELHSYKQLPANFYQIQTKFRDEIRPRFGIMRSREFIMKDAYSFHTNMDSLADTYQIMHRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL P+ A++G IGG SHEF VLA++GE + S D D+ + N + Sbjct: 181 YCAIFDRLGLDYRPVEADTGAIGGAASHEFHVLAESGEDDIAFS-DGSDY---AANVELA 236 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSL 271 + ++ S + AP AA D N K + L Sbjct: 237 EALAPTS---ERPAPGAAIEKVDTPNAKTIEEL 266 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 108/169 (63%), Gaps = 4/169 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + AT +GK + MG YGIG RVVAA IE ++D +GII Sbjct: 405 RGIEVGHIFQLGTKYSEALGATVLDENGKSVVMPMGCYGIGVTRVVAAAIEQNNDDRGII 464 Query: 340 WPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 WP+++APF+++L +NIK + R+ EK+YA L+ +G +V +DD E++G + A + Sbjct: 465 WPEAIAPFQVALVPVNIKKSPR-ERELAEKLYAELTAMGIEVLFDDREKERLGVKLADTE 523 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 LLG P ++++ + + + +E K R + +++++E++ + + N Sbjct: 524 LLGIPHRIVIAERGMDNGVLEYKGRRDADKTEVAMDEIVAFLKEKMGMN 572 >gi|310641908|ref|YP_003946666.1| prolyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2] gi|309246858|gb|ADO56425.1| Prolyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2] Length = 581 Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 159/226 (70%), Gaps = 2/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ L L+E P +AE+ SH+LMLR G I Q + G+Y+++PLG++ L V I+R+E Sbjct: 1 MRQSQLLLTTLREAPAEAEVISHQLMLRAGFIRQLAAGMYTYMPLGRRVLRKVEQIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ +LW ESGRYD YG E++RL DR+D+ GPTHEEV+T + R+ Sbjct: 61 MDRAGAGELLMPVLQPTELWQESGRYDVYGPELMRLQDRHDREFALGPTHEEVITSLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP T YQIQ KFRDE RPRFG++RSREFLMKDAYSFD G H+Y MF + Sbjct: 121 EVNSYRKLPVTLYQIQTKFRDERRPRFGLLRSREFLMKDAYSFDANWAGLDHTYWTMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGE-TQVFCS 224 Y RIF R L + A++G IGG+ +HEF+ LA+ GE T V C+ Sbjct: 181 YQRIFTRCSLNFRAVEADAGAIGGEGETHEFMALAEIGEDTIVACT 226 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 64/162 (39%), Positives = 98/162 (60%), Gaps = 1/162 (0%) Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 E K RGIE+GH+F GTKYS + ATF A G D + MG YGIG R+++A++E + Sbjct: 411 EGKLELHRGIEIGHVFKLGTKYSEKLGATFLDASGTDQVMIMGCYGIGVSRILSAIVEQN 470 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 HD G+IWP ++APF++ +I I D++ E +Y++L G +V DD E+ G +F Sbjct: 471 HDQNGMIWPHALAPFQVHIIPISVKDRLQMQIAEDLYSQLQDRGVEVLLDDREERPGVKF 530 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +DL+G P +++VG K KVE R + +E + + +V Sbjct: 531 KDSDLVGIPARIVVG-KDAEHGKVEFVERRSSHKESIHIHDV 571 >gi|147677598|ref|YP_001211813.1| prolyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|189083504|sp|A5D2U6|SYP_PELTS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146273695|dbj|BAF59444.1| prolyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] Length = 570 Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 113/231 (48%), Positives = 159/231 (68%), Gaps = 1/231 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F P L+E P +AE+ SH+L+LR G I + + G+Y++LPL + + + I+REE Sbjct: 1 MRASELFSPTLREVPAEAEVVSHQLLLRAGFIRRAAAGVYTYLPLAMRVIKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q A++W ESGR+D YG E+ RL DR+D+ GPTHEE++T + R Sbjct: 61 MDRQGGQELLMPIIQPAEIWQESGRWDVYGPELFRLKDRHDRDFALGPTHEEIITVLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE RPRFG+MR REF+MKD YSFD EG SY KM+ + Sbjct: 121 EVSSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDEEGLNVSYMKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDF 230 Y R+F R GL P+ A+SG IGG +HEF+VLA++GE T ++C + D+ Sbjct: 181 YTRVFQRCGLHFRPVEADSGAIGGSDTHEFMVLAESGEATVLYCDGNGCDY 231 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 63/146 (43%), Positives = 88/146 (60%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG IF G KYS + A++ G+ V MG YGIG R +AA IE +HD GI Sbjct: 404 AKGIEVGQIFKLGDKYSRALGASYLDEKGQSRPVIMGCYGIGITRTMAAAIEQNHDRDGI 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP S+APF + +I + D E++Y+RL G + DD E+ G +F ADL+ Sbjct: 464 IWPASIAPFHVVVIPVNVKDGGQYAMAEEVYSRLWAAGIEAVLDDRTERAGVKFKDADLI 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G+PL++ +G+K V + VEI+ R G Sbjct: 524 GYPLRITIGAKAVEEKLVEIRIRKNG 549 >gi|330896119|gb|EGH28340.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 571 Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 159/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + +Y+WLP G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASVLYTWLPRGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y++M ++ Sbjct: 121 ELNSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFS 224 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 4/187 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D +APF+I+L+ ++ R+A +K+YA L Sbjct: 438 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDILAPFQIALVPLRYETDAVREATDKLYADL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIA 557 Query: 431 LEEVINY 437 + +V+++ Sbjct: 558 VADVLSF 564 >gi|77457424|ref|YP_346929.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] gi|114152233|sp|Q3KH16|SYP_PSEPF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|77381427|gb|ABA72940.1| proline tRNA synthetase [Pseudomonas fluorescens Pf0-1] Length = 571 Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 127/303 (41%), Positives = 188/303 (62%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G++E+ +P+ Q A+LW ESGR++ YG E+LR+ DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MDAAGSLEVLMPSTQPAELWQESGRWEEYGPELLRIKDRHGRDFCAGPTHEEVITDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD+YSF + +Y++M + Sbjct: 121 ELSSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFIMKDSYSFHADQASLQVTYDRMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S +D+ Sbjct: 181 YCNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSN----------GSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I V + T+ A + ++ +L D+ P+ K ++A K++LP+ Sbjct: 231 ANIEKAEAVPRETSRAAPSEEL---RLVDT-PDTKTIAA----------LVEKFNLPIEK 276 Query: 301 TFK 303 T K Sbjct: 277 TIK 279 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 112/192 (58%), Gaps = 4/192 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF G KYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGNKYSKAMKCEVLGENGKPVTL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 +MG YGIG RVVAA IE ++D GIIW D++APF+I+L+ ++ ++ R+A +K+YA L Sbjct: 438 EMGCYGIGVSRVVAAAIEQNNDENGIIWSDALAPFQIALVPLRYETELVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R G + + Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTEGQAQALP 557 Query: 431 LEEVINYASHRF 442 + +V+++ R Sbjct: 558 VADVLSFLQARI 569 >gi|254427770|ref|ZP_05041477.1| prolyl-tRNA synthetase [Alcanivorax sp. DG881] gi|196193939|gb|EDX88898.1| prolyl-tRNA synthetase [Alcanivorax sp. DG881] Length = 572 Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 176/273 (64%), Gaps = 9/273 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L ++E P DA + SH+LMLR GM+ + + G+Y+WLP G + L V +IREE Sbjct: 1 MRTSQYLLATVKETPADAVVTSHQLMLRAGMVRKLASGLYTWLPSGLRVLRKVEQVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q +LW ESGR +YG E+LR+ DR++ GPTHEEV+TD+ R+ Sbjct: 61 MDRAGAQEVLMPVVQPMELWEESGRAPAYGPELLRITDRHNNPFCLGPTHEEVITDMVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MRSREF+MKDAYSF + +Y M + Sbjct: 121 ELHSYKQLPANFYQIQTKFRDEIRPRFGIMRSREFIMKDAYSFHTNMDSLADTYQIMHRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL P+ A++G IGG SHEF VLA++GE + S D D+ + N + Sbjct: 181 YCAIFDRLGLDYRPVEADTGAIGGAASHEFHVLAESGEDDIAFS-DGSDY---AANVELA 236 Query: 241 DIISLNSIVEQWTAPYAA--TSDVHNEKLFDSL 271 + +L +E+ AP AA T D N + + L Sbjct: 237 E--ALAPAIER-PAPGAAMETVDTPNARTIEEL 266 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 65/169 (38%), Positives = 105/169 (62%), Gaps = 4/169 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + AT +GK + MG YGIG RVVAA IE ++D +GII Sbjct: 405 RGIEVGHIFQLGTKYSEALGATVLDENGKSVVMPMGCYGIGVTRVVAAAIEQNNDDRGII 464 Query: 340 WPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 WP+++APF+++LI NIK + R+ E +YA L+ G +V +DD E++G + A ++ Sbjct: 465 WPEAIAPFQVALIPVNIKKSPR-ERELAETLYAELTAAGIEVIFDDREKERLGVKLADSE 523 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 L+G P ++++ + + + +E K R + ++ ++ V+ + + N Sbjct: 524 LIGIPHRIVIAERGMDNGVLEYKGRGDADKTEVPVDVVVAFIKGKLGTN 572 >gi|319788986|ref|YP_004150619.1| prolyl-tRNA synthetase [Thermovibrio ammonificans HB-1] gi|317113488|gb|ADU95978.1| prolyl-tRNA synthetase [Thermovibrio ammonificans HB-1] Length = 568 Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 115/226 (50%), Positives = 161/226 (71%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+P +E+P DAEI SHKL++R G I + + G+Y LPLG + + + +IR+E Sbjct: 1 MRFSRAFIPTKKESPADAEIPSHKLLVRAGFIRKVASGLYDILPLGARVIRKIEQVIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA E+ +P + A+LW ESGR+D YGKEM++ DR+++ GPT EE++TD+ R Sbjct: 61 MERAGAQEVILPIMHPAELWQESGRWDVYGKEMIKFKDRHERDYALGPTAEEMITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQI KFRDE+RPRFG+MRSREF+MKDAYSF + E ++ Y MF + Sbjct: 121 EVKSYKELPLNLYQIGRKFRDEIRPRFGLMRSREFIMKDAYSFHASDEDAEREYWNMFET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y RIF RLGL+ + A++G IGG SHEF+V+ADTGE++ V+C + Sbjct: 181 YSRIFKRLGLEFKAVEADTGEIGGSFSHEFMVIADTGESKLVYCPE 226 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 72/160 (45%), Positives = 98/160 (61%), Gaps = 1/160 (0%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V RGIEVGHIF GTKYS M ATF G + + MG YGIG RV+AA +E HD Sbjct: 401 VEKRGIEVGHIFKLGTKYSEAMGATFVDEQGNEKPMVMGCYGIGVTRVMAAAVEQGHDEN 460 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 GIIWP +APF++ +I + + +A E++Y+ L + G DV DD + G +F AD Sbjct: 461 GIIWPVEIAPFEVIVIPVNVKKEEIVEAAERVYSELMEAGFDVLLDDRNARPGFKFKDAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+G P QVIVG K S+ VE+K R +G R ++ ++ V+ Sbjct: 521 LIGIPYQVIVGKK-ASEGVVELKIRRSGERLELPVDGVVG 559 >gi|323489584|ref|ZP_08094811.1| prolyl-tRNA synthetase 1 [Planococcus donghaensis MPA1U2] gi|323396715|gb|EGA89534.1| prolyl-tRNA synthetase 1 [Planococcus donghaensis MPA1U2] Length = 567 Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 155/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+++ F+P L+E P DAE+ SH+L+LR G I Q++ GIYS+LPLG++ L V +IREE Sbjct: 1 MKQTATFIPTLRETPADAEVRSHQLLLRAGFIRQNTSGIYSFLPLGKRVLQKVETVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++E+ +P LQ A+LW ESGR+ SYG E++RL DRND+ G THEEV+T + R Sbjct: 61 MEAANSVEIFMPALQQAELWQESGRWYSYGDELMRLKDRNDREFALGATHEEVITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP +QIQ KFRDE RPRFG++R REFLMKDAYSF T E +Y+ M + Sbjct: 121 EIKSYKKLPLNLFQIQSKFRDEKRPRFGLLRGREFLMKDAYSFHATTESLDETYDVMMQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL + A+SG IGG +HEF+VL++ GE + S Sbjct: 181 YTNIFTRLGLNFRAVIADSGAIGGKDNHEFMVLSEIGEDTIAYS 224 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/164 (40%), Positives = 96/164 (58%), Gaps = 1/164 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVGHIF GT YS+P+ TF GK MG YGIG RV+AAV E D G Sbjct: 403 AKGIEVGHIFKLGTTYSIPLKGTFLNDQGKSMPYIMGCYGIGVSRVLAAVAEQFQDENGF 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD VAP+++ L+ + D R+ E++YA L + +V DD E+ G +FA ADL+ Sbjct: 463 TWPDVVAPYEVHLVPVNVKDDTQRELGEELYALLKENRYEVLLDDRKERAGVKFADADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P+++ +G K ++ +E+K R TG + + +EV+ F Sbjct: 523 GLPIRITIGKK-AAEGILEVKIRRTGETFEWTRDEVLEKIQQFF 565 >gi|290968110|ref|ZP_06559655.1| proline--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] gi|290781785|gb|EFD94368.1| proline--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] Length = 575 Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 126/295 (42%), Positives = 187/295 (63%), Gaps = 22/295 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+++P +AE+ASHK ML+ GMI +++ G YS+LPL ++++ + IIREE Sbjct: 1 MLASKLYCPTLRDDPAEAEVASHKYMLKAGMIRKNASGFYSFLPLARRSVLKIEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++TGA E+ +P +Q A++W ESGR+D YGKEM +LADR+ PTHEE++T + R+ Sbjct: 61 MDKTGAQEIMMPIVQPAEIWQESGRWDVYGKEMFKLADRHGNEYCLAPTHEELITTLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE+RPRFG+MRSREF+M+D+YSFD EG + SY M+ + Sbjct: 121 ELRSYKQLPVNLYQIQNKYRDEIRPRFGLMRSREFVMQDSYSFDTDQEGLEKSYQAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK--------DFMDFP 231 Y RIF R GL+ + A+SG IGG SHEF+ LA +GE V C++ P Sbjct: 181 YSRIFTRCGLQYRTVLADSGQIGGKHSHEFMALAASGEADIVTCTQCAYAADVEQATPNP 240 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS--LPENKRVSARGIEV 284 +P+ I E++ P+ AT E+L + +P K + A +++ Sbjct: 241 LPAAAEPLQAI-------EKFATPHCATI----EELVQAAGVPAEKTIKAVALDI 284 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 94/157 (59%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVG +F GTKYS + A+F DGK MG YGIG R +AA IE HD +GI+ Sbjct: 405 RGIEVGQVFQLGTKYSEALQASFLDKDGKAKPFVMGCYGIGVTRTMAAAIEQYHDERGIL 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++AP++ ++ + D+V A ++Y +LS ++ DD E+ G +F ADL+G Sbjct: 465 WPVAIAPYEAVILPLNMKDEVMVTAARELYTQLSADSSEIVLDDRPERAGVKFNDADLIG 524 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +P+Q++VG + VEIK R TG +E + + + Sbjct: 525 YPVQIVVGKDTKTKGTVEIKVRRTGAKEAVPVRTAVG 561 >gi|330685674|gb|EGG97315.1| proline--tRNA ligase [Staphylococcus epidermidis VCU121] Length = 567 Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MEKVDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKRLPLTLFQIQSKFRDEQRPRFGLLRGREFIMKDAYSFHADEASLDETYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG+ +HEF+ L++ GE + S + Sbjct: 181 YDRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSNE 226 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 69/159 (43%), Positives = 97/159 (61%), Gaps = 2/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSETMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQHHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SV PF + LI I + R+ ++Y +L DV +DD E+ G +F ADL+ Sbjct: 462 IWPKSVTPFDLHLITINPKKEDQRELGNQLYDQLMN-NYDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P++V+VG K + VE+K R TG E++ ++++ NY Sbjct: 521 GLPIRVVVG-KRAEEGIVEVKQRSTGESEEIHIDDLENY 558 >gi|294500903|ref|YP_003564603.1| prolyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294350840|gb|ADE71169.1| prolyl-tRNA synthetase [Bacillus megaterium QM B1551] Length = 565 Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 113/224 (50%), Positives = 157/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DA+I SH+L+LR G + Q++ G+YS+LPLG++ L V I+REE Sbjct: 1 MRQSSTLIPTLREVPADADIKSHQLLLRAGYMRQNASGVYSFLPLGKRVLQKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G++E+ +P LQ A+LW ESGR+ SYG E++R+ DR+ + G THEEV+T + R Sbjct: 61 MDRAGSVELLMPALQQAELWQESGRWYSYGPELMRMKDRHGREFALGATHEEVITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E Y+KMF + Sbjct: 121 EVKSYKRLPLNLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASQESLDEVYDKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GL + A+SG +GG +HEF+VL++ GE + S Sbjct: 181 YSRIFERCGLNFRAVIADSGAMGGKDTHEFMVLSEIGEDTIAYS 224 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 100/158 (63%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVGH+F GT+YS M AT+ +G++ + MG YGIG R VAA+ E +D G+ Sbjct: 401 AKGIEVGHVFKLGTRYSEAMGATYLDENGRNQPMIMGCYGIGVSRTVAAIAEQFNDENGL 460 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP++V P+++ +I + + R+ EK+Y L +V DD E+ G +FA +DL+ Sbjct: 461 LWPEAVTPYQVHVIPVNVKNDEQRELGEKLYNELLDNRFEVLLDDRQERAGVKFADSDLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P++V VG K S+ VE+K R TG ++S++ +++ Sbjct: 521 GLPVRVTVG-KRASEGIVEVKVRKTGESLEVSVDNLVS 557 >gi|239636259|ref|ZP_04677261.1| prolyl-tRNA synthetase [Staphylococcus warneri L37603] gi|239597614|gb|EEQ80109.1| prolyl-tRNA synthetase [Staphylococcus warneri L37603] Length = 567 Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MEKVDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKRLPLTLFQIQSKFRDEQRPRFGLLRGREFIMKDAYSFHADEASLDETYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG+ +HEF+ L++ GE + S + Sbjct: 181 YDRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSNE 226 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/159 (44%), Positives = 97/159 (61%), Gaps = 2/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQHHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SV PF + LI I + R +++Y +L DV +DD E+ G +F ADL+ Sbjct: 462 IWPKSVTPFDLHLITINPKKEEQRKLGDQLYDQLMN-NYDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G PL+V+VG K + VE+K R TG E++ ++++ NY Sbjct: 521 GLPLRVVVG-KRAEEGIVEVKQRSTGESEEIHIDDLENY 558 >gi|270002317|gb|EEZ98764.1| hypothetical protein TcasGA2_TC001328 [Tribolium castaneum] Length = 351 Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 136/362 (37%), Positives = 207/362 (57%), Gaps = 42/362 (11%) Query: 2 RRSKYFLPILQENPRDAEIASH-------KLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 R S+ F P+ P++AE+ H +LML G+I Q S G + +LPLG K+L+ + Sbjct: 8 RLSRLFQPV-SVVPKNAEVKRHDITSKSQRLMLELGIIRQASPGCFHFLPLGVKSLEKLT 66 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 ++ EE + G ++ PTL +A LW ++GR ++ E+ ++ DR+D++ I PTHEE Sbjct: 67 RLVDEEMKKIGGQKIIFPTLTNAKLWEKTGRLETVSSELFQIKDRHDQSYILSPTHEEAA 126 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 +++ S SY++LP YQI K+RDE++PRFG+MR ++FLMKD YSFD E +KH+ Sbjct: 127 SNLLASLAPISYKHLPLKLYQITSKYRDEMKPRFGLMRGKQFLMKDMYSFDTDLETAKHT 186 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y+++ SY RIF R+G+ + + SG +GG+LSHE+ AD GE Sbjct: 187 YDEICKSYDRIFRRIGIDFVKVVGCSGHMGGELSHEYHYKADVGE--------------- 231 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR---GIEVGHIFYF 290 D I++ N Y+A ++V E + P S + GIEVGH F Sbjct: 232 ------DKILTCNK------CNYSANTEVSGE---EKCPNCGNTSVKIHLGIEVGHTFLL 276 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 G KYS P++ATF GK +QMGSYG+G R++AAVIE + I WP ++P+ + Sbjct: 277 GEKYSKPLNATFLNNHGKPDVLQMGSYGLGLSRILAAVIEVMSSEQEIRWPQILSPYSVI 336 Query: 351 LI 352 ++ Sbjct: 337 IL 338 >gi|296122745|ref|YP_003630523.1| prolyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] gi|296015085|gb|ADG68324.1| prolyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] Length = 590 Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 120/229 (52%), Positives = 158/229 (68%), Gaps = 4/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+P L+ENP DAEI SH+LMLR G + Q G Y++LPLG +++ + AIIREE Sbjct: 1 MRWSQSFIPTLKENPSDAEIPSHQLMLRAGYVRQLMAGAYTYLPLGWRSIRKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY---GPTHEEVMTDI 117 + TGA+EM +P LQ DL+ +GR +++G ++ R ++ GPTHEEV+TD+ Sbjct: 61 MDATGALEMLMPALQPIDLFERTGRKEAFGNVLINFNIRRQNHQVHLALGPTHEEVVTDL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 HI SYR LP T YQIQ KFR+E RPRFGV+R+ EF+MKDAYSF + E +Y K+ Sbjct: 121 MSRHISSYRQLPMTVYQIQTKFRNEERPRFGVLRTSEFIMKDAYSFHSSVESLSETYQKI 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 + +Y RIF R GL+ +P+ AESGPIGGD SHEF+ A GE Q VFC K Sbjct: 181 YRAYCRIFARCGLEYLPVEAESGPIGGDASHEFMAPAANGEDQIVFCRK 229 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 2/165 (1%) Query: 259 TSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T D+ N D P E GIEVGH+F GTKYS+ ++AT+ + MG Sbjct: 392 TFDLRNAAAGDPSPRGEGTLELVHGIEVGHVFKLGTKYSVSLNATYDDEAATRQPLIMGC 451 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R++A++ E+ D G++ P S+AP+ + + I +D + ++ L+ G Sbjct: 452 YGIGVNRILASMAETKFDDNGLVLPLSIAPYSVVISTIGVNDPEVDEVVNQLEKELTAAG 511 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D+ DD ++ G +F ADL+G PL+V++G K + + +VE+K R Sbjct: 512 VDLLIDDRDQRPGVKFKDADLIGIPLRVVIGGKGLKEGQVELKWR 556 >gi|330839271|ref|YP_004413851.1| Prolyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] gi|329747035|gb|AEC00392.1| Prolyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] Length = 568 Score = 249 bits (635), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 154/224 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+E P DAEI SH+LMLR GMI + + G+Y++LPL + + + IIREE Sbjct: 1 MLTSKLYAPTLREVPSDAEITSHRLMLRAGMIRKAAGGVYTYLPLAWRTIKKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A++W ESGR+ +G+EM RL D + + GPTHEE++T + R Sbjct: 61 MDAAGGQELCMPIMQPAEIWQESGRWSVFGQEMFRLKDCHGREFCLGPTHEEMITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE+RPRFG+MRSREF+MKD YSFD G+ SY KM+ + Sbjct: 121 EVRSYKQLPLLLYQIQNKYRDEIRPRFGLMRSREFIMKDLYSFDKDEAGADISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +F R GLK P+ A++G IGG+ +HEF VLA GE+++ C Sbjct: 181 YTNVFTRCGLKFRPVEADAGAIGGNHTHEFTVLAAAGESEIACC 224 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 96/158 (60%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE G +F GTKYS + ATF +GK+ + MG YGIG R +AA IE +D GII Sbjct: 403 RGIEAGQVFKLGTKYSEALGATFLDENGKEKALFMGCYGIGVGRTMAAAIEQHNDEHGII 462 Query: 340 WPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP ++AP+++ + +N KA +Q+ E++Y L G D DD ++ G +F ADL Sbjct: 463 WPRAIAPYEVVVVPVNAKASEQLA--LAEEVYEMLLAAGVDAILDDRKDRAGVKFKDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G+PL++ +G K + + K+E+K R +G D + E + Sbjct: 521 IGYPLRITIGPKALEEGKIELKVRRSGESCDCTKAECL 558 >gi|118602380|ref|YP_903595.1| prolyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|152016598|sp|A1AW17|SYP_RUTMC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118567319|gb|ABL02124.1| prolyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 559 Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 117/239 (48%), Positives = 162/239 (67%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ +K +P +E P DA+I SH+LM+R G+I + + G+YS+LP+G + L V IIR+E Sbjct: 1 MKTTKLLIPTQKEVPNDAQIISHQLMIRAGLISKLASGLYSYLPMGVRVLHKVENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA E+ +P +Q A+LW SGR+D YG E+LR DR+ + GPTHEEV+T + Sbjct: 61 MNKSGAQEVFMPVVQPAELWKTSGRWDKYGTELLRFTDRHQREFCLGPTHEEVITHLAAQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF L + +Y+ M+ + Sbjct: 121 YLRSYKQLPMNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHLDQYSLQQTYDVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y IF RL L + A+SG IGGD SHEF VLA++GE + C D ++ E F Sbjct: 181 YCNIFDRLSLDYHAVLADSGSIGGDASHEFHVLAESGEDTI-CFSDESNYAANIEKVSF 238 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 1/171 (0%) Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 + K + RGIEVGHIF GTKYS M G GK MG YGIG R++AA IE + Sbjct: 389 KGKLIIKRGIEVGHIFQLGTKYSSAMKVNVIGESGKAITTTMGCYGIGVTRIIAASIEQN 448 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 +D KGII+P ++APF++ ++ I + + +K+Y + G +V DD E+ G Sbjct: 449 YDDKGIIFPQAIAPFQVVIVPINYNKSTRVKALSDKLYQQFIGAGIEVLLDDRKERAGIM 508 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FA ++LLG P ++++ + VE K R + M ++ +++ + Sbjct: 509 FADSELLGIPHRMVISDTHADNGNVEYKARDKIDKMQMKFDDALSFIQFKL 559 >gi|89098602|ref|ZP_01171484.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89086564|gb|EAR65683.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 568 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 122/276 (44%), Positives = 175/276 (63%), Gaps = 15/276 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S +P L+E P DAE+ SH+L+LR G I Q++ G+YS+LP+ +K L + AI+REE Sbjct: 1 MKQSMTLIPTLREVPADAEVRSHQLLLRAGFIRQNAAGVYSYLPMARKVLQKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P LQ A+LW ESGR+ +YG E++RL DRND+ G THEEV+T + R Sbjct: 61 MDDAGASELLMPALQQAELWQESGRWYTYGPELMRLKDRNDREFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E Y+++F + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEQRPRFGILRGREFIMKDAYSFHSSQESLDEVYSRLFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFTRCGLNFRAVIADSGAMGGKDTHEFMVLSDIGE----------DTIAYSDASDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + + ++ + A SD ++L EN+R Sbjct: 231 ANVEMAPVINAY-----AKSDAAPKELEKVQTENQR 261 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 103/168 (61%), Gaps = 1/168 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVGH+F GT+YS M+A + +G+ + MG YGIG R++AA+ E +D KG Sbjct: 402 AKGIEVGHVFKLGTRYSEAMNAVYLDENGRTQPMIMGCYGIGVSRILAAIAEQYNDDKGF 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP +APFK+ +I + D+ E++Y L G +V +DD E+ G +FA ADL+ Sbjct: 462 IWPADLAPFKVHVIAVNMKDEAQAGLGEELYKELRGNGYEVLFDDRPERAGVKFADADLI 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 G P+++ G K S+ VE+K R TG E++ ++++ + + ++ + Sbjct: 522 GLPVRITAGKK-ASEGIVEVKVRSTGEMEEIHKDQLLEHIASILTSQK 568 >gi|304315915|ref|YP_003851060.1| prolyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777417|gb|ADL67976.1| prolyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 570 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ M+ + + G+Y +LPLG++ L + I+REE Sbjct: 1 MRLSQLLIPTLREVPAEAEIPSHTLMLKAAMMRKLASGVYIYLPLGKRVLKKIEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P + A+L ESGR+D +G EM +L DRND+ GPTHEEV TD+ R+ Sbjct: 61 MDRAGAQEVLMPAIIPAELLKESGRWDVFGPEMFKLKDRNDREFCLGPTHEEVFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP T YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD+ +G S++KM+ + Sbjct: 121 EVKSYRQLPLTIYQIQTKYRDERRPRFGVMRSREFIMKDAYSFDVDWDGLDASFDKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF R GLK + A+SG +GG S EF+V + GE + +C Sbjct: 181 YCRIFDRCGLKYTVVEADSGAMGGKDSKEFMVTSSVGEAVIAYC 224 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 70/166 (42%), Positives = 98/166 (59%), Gaps = 1/166 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + A + +G + + MG YGIG R+ AA IE +HD KGII Sbjct: 405 RGIEVGHIFKLGTKYSDALGANYIDENGNEKPMIMGCYGIGLNRIAAAAIEQNHDDKGII 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP S+AP+ ++ + + R+ EKIY LSK G + DD + G +F ADLLG Sbjct: 465 WPMSIAPYHAIVVPVNVSNDAQRNLAEKIYDELSKAGIETLIDDRDLRAGVKFNDADLLG 524 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 P+++ VG K SD+ VE+K R +++ +EV+N N+ Sbjct: 525 IPIRITVGKK-ASDNIVELKLRRDENSIELNYDEVVNKVKELIINS 569 >gi|326318382|ref|YP_004236054.1| prolyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375218|gb|ADX47487.1| prolyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 581 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 116/226 (51%), Positives = 157/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFVSTLKEAPADAEVVSHKLMTRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+ W E+GR+D G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVEVTMPVVQPAEFWQETGRFDKMGPELLRIRDRHGRDFVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD +K SY M + Sbjct: 121 ELRSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQAAAKASYQVMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y RIF R GL + A+SG IGGDLS EF V+A TGE V+C + Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPQ 226 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 75/166 (45%), Positives = 104/166 (62%), Gaps = 3/166 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K A RGIEVGH+FY GTKYS M+ATF G DGK + +MG Sbjct: 393 VADLRNVVAGDPSPDGKGALAIERGIEVGHVFYLGTKYSRAMNATFLGEDGKPAFFEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + + I + R A EK++A L Sbjct: 453 YGIGITRLPAAAIEQNHDERGIIWPDAIAPFTVVVCPIGMDRSEEVRAAAEKLHADLLAA 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD GE+ G+ FA +L+G P +V++ + + + +VE +HR Sbjct: 513 GVDVILDDRGERPGAMFADWELIGVPHRVVLSDRGLKEGQVEYQHR 558 >gi|262276504|ref|ZP_06054313.1| prolyl-tRNA synthetase [Grimontia hollisae CIP 101886] gi|262220312|gb|EEY71628.1| prolyl-tRNA synthetase [Grimontia hollisae CIP 101886] Length = 571 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 114/218 (52%), Positives = 149/218 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLQKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 INNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR+REF M DAYSFDL EG + SY M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRAREFSMMDAYSFDLDKEGLQKSYEAMHTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y F R+GL P+ A++G IGG SHEF VLA++GE Sbjct: 181 YCAAFDRMGLDYRPVLADTGAIGGSASHEFHVLANSGE 218 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 103/165 (62%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M GADGK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMGCGVLGADGKNVILEMGCYGIGVSRVVAAAIEQNHDENGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF ++++ + H + +DA EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFTVAIVPMNMHKSERVKDAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E KHR G + + +E ++ + + + Sbjct: 527 GIPHTIIIGERSMDNGVFEYKHRRNGEKVPVDMENMVEFLKAKLA 571 >gi|226313026|ref|YP_002772920.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] gi|254782888|sp|C0ZF57|SYP_BREBN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226095974|dbj|BAH44416.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] Length = 581 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 122/282 (43%), Positives = 178/282 (63%), Gaps = 4/282 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DAEIASHKL+LR GM Q + GIY++LPL ++L + AI+REE Sbjct: 1 MKQSQMLIPTLREVPSDAEIASHKLLLRAGMARQLASGIYTYLPLALRSLHKIQAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E+ +P +Q A+LW ++GR+D YG E++RL DR+D+ GPTHEEV+T + R Sbjct: 61 MNNAGGQELLMPAMQPAELWHQTGRWDVYGPELVRLRDRHDRPFALGPTHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE+RPRFG++R REF+MKDAYSFD + +G ++ M+ + Sbjct: 121 EINSYKKLPINLYQIQTKFRDEVRPRFGLIRCREFIMKDAYSFDTSQDGLDRNFQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL + A++G IGG ++EF+ L D GE + S++ DF + N + Sbjct: 181 YTNIFTRVGLNFRAVEADAGAIGGKGTYEFMALCDIGEDTIAYSEEG-DF---AANLEKA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 +++ S AP K D L + ++ A+ I Sbjct: 237 EVVYKPSAKPATEAPAREKLHTPGIKTIDQLVQALQIEAKQI 278 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 88/241 (36%), Positives = 130/241 (53%), Gaps = 17/241 (7%) Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 GP+G D + ++AD +D D + + TD+ L +V + Sbjct: 335 GPVGID-PEKVDIIADN------FVQDVYDGVVGANETDY----HLTHVVAGRDFTVSKY 383 Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P V ARG+EVGH+F GTKYS M AT+ +G+ + MG Y Sbjct: 384 ADLRNITEGDECPRTGGVIKFARGVEVGHVFKLGTKYSTAMGATYLDENGRSQPMIMGCY 443 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKV 375 GIG R +AAVIE ++D GIIWP SVAPF + +I N+K +Q R A E+I L K Sbjct: 444 GIGVSRTIAAVIEQNNDENGIIWPVSVAPFHVHVIPVNVKVEEQ--RQASEQITEALRKA 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V +DD E+ G +F ADL+G PL++ V K + VE++ R G D+ L++++ Sbjct: 502 GIEVLFDDRPERAGVKFKDADLIGLPLRITVSDKAAQEGTVEVRIRKNGETHDVKLDQLV 561 Query: 436 N 436 + Sbjct: 562 D 562 >gi|20808685|ref|NP_623856.1| prolyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|81848077|sp|Q8R7S9|SYP_THETN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|20517322|gb|AAM25460.1| Prolyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] Length = 573 Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P DAEI SH LML+ G++ + + GIY +LPLG++ L V I+REE Sbjct: 1 MRLSQLLMPTLREVPADAEIPSHVLMLKAGLMRKLAAGIYVYLPLGKRVLKKVEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L+ E+GR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDREGSQEVLMSALIPAELFKETGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD EG S+NKM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDADWEGLDESFNKMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF R GLK + + A+ G +GG S EF+V++ GE + +C Sbjct: 181 YCRIFDRCGLKYLVVEADPGAMGGRDSKEFMVISSVGEAVIAYC 224 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 66/141 (46%), Positives = 89/141 (63%), Gaps = 1/141 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGHIF GTKYS + AT+ +G + + MG YGIG R VAA+IE HD KGI Sbjct: 403 ARGIEVGHIFKLGTKYSEALGATYTDEEGNEKPIVMGCYGIGINRTVAAIIEQHHDEKGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAP+ + ++ + D+ + EKIY +L + +V DD + G +F ADL+ Sbjct: 463 IWPMSVAPYHVIVVPVNVSDEEQKQIAEKIYNKLLEEKLEVLIDDRDVRAGVKFNDADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIK 419 G P++V +G K V + VEIK Sbjct: 523 GIPVRVTIGKK-VKEGIVEIK 542 >gi|319401447|gb|EFV89657.1| prolyl-tRNA synthetase [Staphylococcus epidermidis FRI909] Length = 567 Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REFLMKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKYRDEKRPRFGLLRGREFLMKDAYSFHFDEASLDATYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + S + Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVYSNE 226 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 99/166 (59%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SV PF I LI I R +++Y +L DV +DD E+ G +F +DL+ Sbjct: 462 IWPKSVTPFDIHLITINPKKDDQRTLGDQLYQKLMD-SYDVLYDDRKERAGVKFNDSDLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G P++V+VG K + VE+K R+ G+ E++ ++E+ Y F N Sbjct: 521 GLPVRVVVG-KRAEEGIVEVKQRINGLSEEVQVDELETYLQELFKN 565 >gi|82750864|ref|YP_416605.1| prolyl-tRNA synthetase [Staphylococcus aureus RF122] gi|114152256|sp|Q2YXK5|SYP_STAAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|82656395|emb|CAI80814.1| prolyl-tRNA synthetase [Staphylococcus aureus RF122] Length = 567 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGTELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 103/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ + +++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIADLMTVITNKYDN 565 >gi|314933442|ref|ZP_07840807.1| proline--tRNA ligase [Staphylococcus caprae C87] gi|313653592|gb|EFS17349.1| proline--tRNA ligase [Staphylococcus caprae C87] Length = 567 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ I+REE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 ELKSYKRLPLTLFQIQSKYRDEKRPRFGLLRGREFIMKDAYSFHADEESLDATYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG+ +HEF+ L++ GE + S + Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSNE 226 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/159 (44%), Positives = 99/159 (62%), Gaps = 2/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GI Sbjct: 402 AEGIEVGQVFKLGTKYSEAMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNNDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SV PF + LI I R+ +++YA+L+ DV +DD E+ G +F ADL+ Sbjct: 462 IWPKSVTPFDLHLITINPKKDDQRELGDQLYAQLND-KFDVLYDDRKERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G PL+V+VG K + VE+K RL G E++ + ++ NY Sbjct: 521 GLPLRVVVG-KRAEEGVVEVKQRLNGESEEIHVNDLENY 558 >gi|40063052|gb|AAR37908.1| prolyl-tRNA synthetase [uncultured marine bacterium 560] Length = 567 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 115/230 (50%), Positives = 161/230 (70%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S +P ++E P DA+I SH+LM+R G++ + + G+YS+LP+G + + V IIREE Sbjct: 1 MKSSDLLIPTIKEAPNDAQIISHQLMIRAGLVSKLASGLYSYLPIGLRVIQKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++ A E+ +P Q A+LW ESGR++ YG E+LR DR+++ GPTHEEV+T+I + Sbjct: 61 MNKSLAQELLMPVAQPAELWQESGRWEEYGPELLRFKDRHERDFCLGPTHEEVITNIAKQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + +Y M + Sbjct: 121 YLRSYKQLPINFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHIDEASLGETYQVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y IF RLGL+ + A+SG IGGD SHEF VLAD+GE + C + D+ Sbjct: 181 YCNIFDRLGLEYKVVLADSGAIGGDSSHEFHVLADSGEDAI-CFSNKSDY 229 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M+A G DGK + MG YGIG R+VAA IE +HD KGII Sbjct: 403 RGIEVGHIFQLGTKYSDAMNANVIGEDGKAVNMNMGCYGIGVTRIVAASIEQNHDDKGII 462 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +P+S+APF++ ++ I + R +++Y + G +V D+ E+ G FA ++LL Sbjct: 463 FPESIAPFQLVIVPINYNKSSRVRKLADELYEQFLSQGVEVLLDNRKERPGIMFADSELL 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P ++++ +E K R Sbjct: 523 GIPHRLVISDTHADSGNIEYKSR 545 >gi|229061422|ref|ZP_04198767.1| Prolyl-tRNA synthetase [Bacillus cereus AH603] gi|228717845|gb|EEL69493.1| Prolyl-tRNA synthetase [Bacillus cereus AH603] Length = 566 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 121/253 (47%), Positives = 164/253 (64%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+++LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQASELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R L + A+SG +GG +HEF+VL+D GE D S+ +D+ Sbjct: 181 YSNIFARCSLNFRAVIADSGAMGGKDTHEFMVLSDVGE----------DTIAYSDTSDYA 230 Query: 241 DIISLNSIVEQWT 253 I + +V +T Sbjct: 231 ANIEMAPVVATYT 243 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 98/162 (60%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 403 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLIMGCYGIGVSRTVAAIAEQFNDENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SVAPF + +I + R+ IY L + G +V DD E+ G +FA ADL Sbjct: 463 VWPKSVAPFHVHVIPVNMKSDAQREMGGNIYNSLQEQGYEVLLDDRAERAGVKFADADLF 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 523 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563 >gi|330807862|ref|YP_004352324.1| proline--tRNA ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375970|gb|AEA67320.1| Proline--tRNA ligase (proline tRNA synthetase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 571 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 129/303 (42%), Positives = 186/303 (61%), Gaps = 24/303 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V AI+REE Sbjct: 1 MRTSQYLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G++E+ +P Q A+LW ESGR++ YG E+LR+ DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MDAAGSLEVLMPGTQPAELWQESGRWEEYGPELLRIKDRHGRDFCAGPTHEEVITDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD+YSF + +Y++M + Sbjct: 121 ELSSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFIMKDSYSFHADLASLQITYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S +D+ Sbjct: 181 YCNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSN----------GSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I V + T+ A T ++ +L D+ N + A+ +E Y+LP+ Sbjct: 231 ANIEKAEAVPRETSRAAPTEEL---RLVDT--PNAKTIAQLVE---------GYNLPIER 276 Query: 301 TFK 303 T K Sbjct: 277 TIK 279 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 111/192 (57%), Gaps = 4/192 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF G KYS M G +GK + Sbjct: 378 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGNKYSKAMKCEVLGENGKPVTL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 +MG YGIG RVVAA IE ++D KGIIW D++APF+I+L+ ++ + R+A +K+YA L Sbjct: 438 EMGCYGIGVSRVVAAAIEQNNDEKGIIWSDTLAPFQIALVPLRYETDLVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + + Sbjct: 498 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTEAEPQALP 557 Query: 431 LEEVINYASHRF 442 + +V+++ R Sbjct: 558 VADVLSFLQARI 569 >gi|167036776|ref|YP_001664354.1| prolyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115198|ref|YP_004185357.1| prolyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226701349|sp|B0KCH5|SYP_THEP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166855610|gb|ABY94018.1| prolyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928289|gb|ADV78974.1| prolyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 570 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V I+REE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+NKM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDMDWEGLDKSFNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF R GLK + + A+SG +GG S EF+V++ GE + +C Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISGVGEAVIAYC 224 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 70/156 (44%), Positives = 94/156 (60%), Gaps = 1/156 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + A + +G + + MG YGIG R VAA+IE HD KGII Sbjct: 405 RGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIIMGCYGIGINRTVAAIIEQHHDEKGII 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP SVAP+ + ++ + ++ E IYA L K G +V DD + G +F ADLLG Sbjct: 465 WPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRAGVKFNDADLLG 524 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 P+++ VG K V D VEIK R E++ + +V+ Sbjct: 525 IPIRITVGKK-VDDGIVEIKLRENEEAEEVKISDVV 559 >gi|139948347|ref|NP_758476.2| probable prolyl-tRNA synthetase, mitochondrial isoform 1 [Mus musculus] gi|123239922|emb|CAM27480.1| prolyl-tRNA synthetase (mitochondrial)(putative) [Mus musculus] Length = 475 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 145/412 (35%), Positives = 216/412 (52%), Gaps = 36/412 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L+ D S +LML+ G+I S G Y +P +A++ + +I +E G +++ Sbjct: 59 LEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKIN 118 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLP 129 +P+L A+LW + R+D G+E+LRL DR+ K GPTHEE +T + S K SY+ LP Sbjct: 119 MPSLSPAELWRATSRWDLMGRELLRLRDRHGKEYCLGPTHEEAVTALVASQKKLSYKQLP 178 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 YQ+ KFRDE RPRFG++R REF MKD Y+FD + E ++ +Y + +Y R+F RLG Sbjct: 179 LLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLG 238 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFDDIISLNSI 248 L+ + RA+ G IGG +SHEF + D GE + V C S NT+ D+ I Sbjct: 239 LQWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSCHF-----SANTEILDLS--QKI 291 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 P T +GIEVGH FY TKYS +A F A G+ Sbjct: 292 CPDCQGPLTET--------------------KGIEVGHTFYLSTKYSSIFNALFTNAHGE 331 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACE 366 +MG YG+G R++AA IE I WP +AP+++ +I K + + + E Sbjct: 332 SLLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVE 391 Query: 367 KIY----ARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 K+Y + ++ +V DD IG++ A+ LG+P +I G + + D Sbjct: 392 KLYDDIMEAVPQLRGEVLLDDRTHLTIGNRLKDANKLGYPFVIIAGKRALED 443 >gi|15614982|ref|NP_243285.1| prolyl-tRNA synthetase [Bacillus halodurans C-125] gi|81857777|sp|Q9KA71|SYP_BACHD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|10175039|dbj|BAB06138.1| prolyl-tRNA synthetase [Bacillus halodurans C-125] Length = 569 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 117/255 (45%), Positives = 168/255 (65%), Gaps = 10/255 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S + +P ++E P DA++ SH+LMLR GMI Q + GIY++LPL ++ + + +I+REE Sbjct: 1 MKQSFFLVPTMREVPADADVVSHQLMLRAGMIRQVAAGIYTYLPLARRVIRKIESIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++TGA E+++PTL A+LW ESGR++ YG E++RL DR+++ GPTHEEV+T + R Sbjct: 61 LDQTGAQEITMPTLHPAELWQESGRWEKYGDELMRLTDRHNRQFALGPTHEEVITSLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF E Y M+ + Sbjct: 121 SINSYKKLPLNVYQIQSKFRDERRPRFGLLRGREFIMKDAYSFHTGGESLDEMYKVMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL P+ A+SG IGG +HEF+ LAD GE + S+ +D+ Sbjct: 181 YSRIFRRAGLNVRPVIADSGAIGGKDTHEFMALADVGEDTIAY----------SDQSDYA 230 Query: 241 DIISLNSIVEQWTAP 255 I + ++ +T P Sbjct: 231 ANIEMAAVKVNYTRP 245 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/148 (46%), Positives = 91/148 (61%), Gaps = 5/148 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG +F GT YS + ATF +GK + MG YGIG R+VAAVIE HD GI Sbjct: 402 AQGIEVGQVFKLGTVYSEKLGATFLDENGKSQPMLMGCYGIGVSRMVAAVIEQHHDEDGI 461 Query: 339 IWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +WP SVAPF + + +N+K +Q+ + +Y L + G DV DD E+ G +F AD Sbjct: 462 VWPTSVAPFDVHVLALNVKKEEQM--KLADSVYHSLQQAGLDVLLDDRPERAGVKFKDAD 519 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 L+G PL+V VG K + VE+K R TG Sbjct: 520 LIGLPLRVAVG-KRADEGYVEVKVRKTG 546 >gi|332983243|ref|YP_004464684.1| prolyl-tRNA synthetase [Mahella australiensis 50-1 BON] gi|332700921|gb|AEE97862.1| prolyl-tRNA synthetase [Mahella australiensis 50-1 BON] Length = 569 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 117/226 (51%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F L+E P +AEI SH+LMLR G++ + + GIY++LPLG++ L V I+REE Sbjct: 1 MKMSEMFFTTLRETPSEAEIPSHQLMLRAGLMRKLASGIYNYLPLGKRVLKKVEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++TGA E+ L A+LW E+GR+D +G EM +L DRN++ GPTHEE+ TDI R+ Sbjct: 61 MDKTGAQEILASALLPAELWKETGRWDVFGPEMFKLKDRNEREFCLGPTHEEIFTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LPF YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD +G SY KM+ + Sbjct: 121 EIKSYKQLPFNLYQIQTKYRDEKRPRFGVMRSREFIMKDAYSFDKDWDGLDISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSK 225 Y IF R LK + A++G +GG S+EF+V +D GE +V +C + Sbjct: 181 YCAIFDRCDLKYWVVDADTGAMGGKDSNEFMVSSDVGEAEVAYCDE 226 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/180 (38%), Positives = 106/180 (58%), Gaps = 3/180 (1%) Query: 259 TSDVHNEKLFDSLPE-NKRVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N ++ D P+ K ++ ARGIEVGHIF GTKY+ + AT+ +G++ + MG Sbjct: 380 VADIRNIEVGDPCPKCGKPINIARGIEVGHIFKLGTKYTEALGATYLDENGQEQPIIMGC 439 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R VAA+IE HD +GIIWP SV P+ + ++ + A EKI+ L G Sbjct: 440 YGIGINRTVAAIIEQHHDDRGIIWPMSVTPYHVIIVVASNYQPEQIQAAEKIHYELVSRG 499 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +F ADL+G P+++ VG K +S VE K R D+ + ++++ Sbjct: 500 IEVLLDDRDERAGVKFNDADLIGIPIRITVGKK-ISAGMVEFKRRDKADSIDIPVSDIVD 558 >gi|326391122|ref|ZP_08212668.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325992821|gb|EGD51267.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 570 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V I+REE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+NKM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDVDWEGLDKSFNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF R GLK + + A+SG +GG S EF+V++ GE + +C Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISGVGEAVIAYC 224 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 88/241 (36%), Positives = 127/241 (52%), Gaps = 19/241 (7%) Query: 199 SGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAA 258 +GPIG L E +++ D Q +F + + TD+ I ++N + + A Sbjct: 334 AGPIG--LKGEVMIIVDNEIPQ------MRNFIVGANETDYH-IKNVN-----YGRDFKA 379 Query: 259 --TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 +D+ N D P + RGIEVGHIF GTKYS + A + +G + + M Sbjct: 380 DVVADIKNVIEGDKCPRCGSLLKIDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIIM 439 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R VAA+IE HD KGIIWP SVAP+ + ++ + ++ E IYA L K Sbjct: 440 GCYGIGINRTVAAIIEQHHDEKGIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQK 499 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD + G +F ADLLG P+++ VG K V D VEIK R E++ + +V Sbjct: 500 EGIEVLIDDRDLRAGVKFNDADLLGIPIRITVGKK-VDDGIVEIKLREKEEAEEVKISDV 558 Query: 435 I 435 + Sbjct: 559 V 559 >gi|120554655|ref|YP_959006.1| prolyl-tRNA synthetase [Marinobacter aquaeolei VT8] gi|152112927|sp|A1U1F0|SYP_MARAV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120324504|gb|ABM18819.1| prolyl-tRNA synthetase [Marinobacter aquaeolei VT8] Length = 577 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 123/224 (54%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + +E P DAEI SH+LMLR GMI + + G+Y+WLPLG + L V I+REE Sbjct: 1 MRASRYLIATQKETPSDAEIISHQLMLRAGMIRKLAAGLYTWLPLGLRTLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ +P +Q A+LW ESGR++ YG E+LRL DR+ + +GPTHEEV+TD+ R+ Sbjct: 61 MDKSGAQEVLMPAVQPAELWQESGRWEQYGGELLRLNDRHGRDFCFGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE RPRFGVMR+REF+MKDAYSF L E +Y M + Sbjct: 121 ELKSYKELPANFYQIQTKFRDERRPRFGVMRAREFIMKDAYSFHLNAESLDETYKVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL P++A+SG IGG SHEF VLA +GE + S Sbjct: 181 YCNIFDRLGLDYRPVQADSGSIGGSSSHEFHVLASSGEDAIVFS 224 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 66/159 (41%), Positives = 102/159 (64%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M+A+ GK ++MG YGIG R+VAA IE +HD KGII Sbjct: 409 RGIEVGHIFKLGNKYSKAMNASVLDEHGKTSIMEMGCYGIGVSRIVAASIEQNHDEKGII 468 Query: 340 WPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H V +A +K+Y +L + G DV DD E+ G +FA +L+ Sbjct: 469 WPDAIAPFEVAIVTLNGHKSPVVAEAGDKLYEQLRQAGYDVLLDDRNERPGVKFADIELI 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P + +V + +S +E K R ++D+ ++E +++ Sbjct: 529 GIPHRFVVSERGLSAGTLEYKGRRDEEKQDIPVDEALSF 567 >gi|139948914|ref|NP_001077356.1| probable prolyl-tRNA synthetase, mitochondrial isoform 2 [Mus musculus] gi|159575933|emb|CAP19280.1| prolyl-tRNA synthetase (mitochondrial)(putative) [Mus musculus] Length = 511 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 145/412 (35%), Positives = 216/412 (52%), Gaps = 36/412 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L+ D S +LML+ G+I S G Y +P +A++ + +I +E G +++ Sbjct: 95 LEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKIN 154 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLP 129 +P+L A+LW + R+D G+E+LRL DR+ K GPTHEE +T + S K SY+ LP Sbjct: 155 MPSLSPAELWRATSRWDLMGRELLRLRDRHGKEYCLGPTHEEAVTALVASQKKLSYKQLP 214 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 YQ+ KFRDE RPRFG++R REF MKD Y+FD + E ++ +Y + +Y R+F RLG Sbjct: 215 LLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLG 274 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFDDIISLNSI 248 L+ + RA+ G IGG +SHEF + D GE + V C S NT+ D+ I Sbjct: 275 LQWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSCHF-----SANTEILDLS--QKI 327 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 P T +GIEVGH FY TKYS +A F A G+ Sbjct: 328 CPDCQGPLTET--------------------KGIEVGHTFYLSTKYSSIFNALFTNAHGE 367 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACE 366 +MG YG+G R++AA IE I WP +AP+++ +I K + + + E Sbjct: 368 SLLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVE 427 Query: 367 KIY----ARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 K+Y + ++ +V DD IG++ A+ LG+P +I G + + D Sbjct: 428 KLYDDIMEAVPQLRGEVLLDDRTHLTIGNRLKDANKLGYPFVIIAGKRALED 479 >gi|307266366|ref|ZP_07547904.1| prolyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306918602|gb|EFN48838.1| prolyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 570 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V I+REE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+NKM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDVDWEGLDKSFNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF R GLK + + A+SG +GG S EF+V++ GE + +C Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISGVGEAVIAYC 224 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 70/156 (44%), Positives = 94/156 (60%), Gaps = 1/156 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + A + +G + + MG YGIG R VAA+IE HD KGII Sbjct: 405 RGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIIMGCYGIGINRTVAAIIEQHHDEKGII 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP SVAP+ + ++ + ++ E IYA L K G +V DD + G +F ADLLG Sbjct: 465 WPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRAGVKFNDADLLG 524 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 P+++ VG K V D VEIK R E++ + +V+ Sbjct: 525 IPIRITVGKK-VDDGIVEIKLREKEEAEEVKISDVV 559 >gi|269940754|emb|CBI49136.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20] Length = 567 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|258452562|ref|ZP_05700568.1| prolyl-tRNA synthetase [Staphylococcus aureus A5948] gi|257859780|gb|EEV82622.1| prolyl-tRNA synthetase [Staphylococcus aureus A5948] Length = 567 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|298694555|gb|ADI97777.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133] Length = 567 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|87161679|ref|YP_493853.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194973|ref|YP_499773.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221385|ref|YP_001332207.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509429|ref|YP_001575088.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142497|ref|ZP_03566990.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|262048155|ref|ZP_06021042.1| prolyl-tRNA synthetase [Staphylococcus aureus D30] gi|262051325|ref|ZP_06023548.1| prolyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|282920507|ref|ZP_06328228.1| prolyl-tRNA synthetase [Staphylococcus aureus A9765] gi|284024256|ref|ZP_06378654.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132] gi|294848259|ref|ZP_06789006.1| prolyl-tRNA synthetase [Staphylococcus aureus A9754] gi|304381173|ref|ZP_07363826.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|114152254|sp|Q2FHH5|SYP_STAA3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152255|sp|Q2G1Z4|SYP_STAA8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|172049021|sp|A6QGG3|SYP_STAAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189083518|sp|A8Z3U3|SYP_STAAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|87127653|gb|ABD22167.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202531|gb|ABD30341.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374185|dbj|BAF67445.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368238|gb|ABX29209.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|259160700|gb|EEW45721.1| prolyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|259163721|gb|EEW48276.1| prolyl-tRNA synthetase [Staphylococcus aureus D30] gi|282594169|gb|EFB99156.1| prolyl-tRNA synthetase [Staphylococcus aureus A9765] gi|294825059|gb|EFG41481.1| prolyl-tRNA synthetase [Staphylococcus aureus A9754] gi|302751086|gb|ADL65263.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340156|gb|EFM06097.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198505|gb|EFU28834.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01] gi|320140920|gb|EFW32767.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131] gi|320144364|gb|EFW36130.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177] gi|329313933|gb|AEB88346.1| Prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131] gi|329727831|gb|EGG64282.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21189] Length = 567 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|312877991|ref|ZP_07737931.1| prolyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311795226|gb|EFR11615.1| prolyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 572 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDRSGAQEVHMSALMPKELWEESGRWAVFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ +G SY KM+ + Sbjct: 121 EITSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDIDEKGLDISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF R GL + A++G +GG SHEF+V + GE ++ +C Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYC 224 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 82/242 (33%), Positives = 123/242 (50%), Gaps = 17/242 (7%) Query: 199 SGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAA 258 +GPIG + V AD K +F + + TD+ I ++ + +A Sbjct: 333 AGPIGLSID----VYADNE------VKYLKNFVVGANKTDYH--IKNVNLSDFKVTKFAD 380 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 ++ + L K RGIEVGHIF GTKY+ + + G+ + MG YG Sbjct: 381 LRNITQDDLCPKCRSQKVTIERGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLMIMGCYG 440 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R AA+IE HD GIIWP +VAP+++ ++ + D+ +IY L K G + Sbjct: 441 IGINRTAAAIIEQMHDEDGIIWPITVAPYEVIIVPVNVKDEAQNKIAFEIYENLQKNGVE 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEV 434 V DD E+ G +F ADL+G P +V VG K VS+ K+EI++R T + D ++E + Sbjct: 501 VLIDDRDERAGVKFKDADLIGIPFRVTVGKK-VSEGKLEIRNRRTKESFEVEIDNAVEFI 559 Query: 435 IN 436 IN Sbjct: 560 IN 561 >gi|282916523|ref|ZP_06324281.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283770327|ref|ZP_06343219.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|282319010|gb|EFB49362.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283460474|gb|EFC07564.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] Length = 567 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|260881838|ref|ZP_05893576.1| proline--tRNA ligase [Mitsuokella multacida DSM 20544] gi|260847809|gb|EEX67816.1| proline--tRNA ligase [Mitsuokella multacida DSM 20544] Length = 571 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 126/287 (43%), Positives = 174/287 (60%), Gaps = 16/287 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S + P L+ P +AEIASH+LM R GMI + + G+Y++LPL + + + IIREE Sbjct: 1 MRASNLYAPTLRNTPAEAEIASHQLMYRAGMIRKTAGGMYTFLPLAWRTIRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P LQ A+ W ESGR+ +YG EM+R+ DR+ + GPTHEE++T + R Sbjct: 61 MDAAGGQEIMMPILQPAEFWQESGRWGAYGDEMMRIKDRHGRDFCLGPTHEEMITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MRSREF+MKD YSFD EG SY KM+ + Sbjct: 121 EVRSYKELPLMLYQIQDKFRDERRPRFGLMRSREFIMKDLYSFDKDVEGMNESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y IF R+GL+ P+ A++G IGG SHEF VLAD GE+ + C+K D+ E + Sbjct: 181 YTNIFTRMGLEFRPVEADNGAIGGGHSHEFTVLADAGESNIAVCTK--CDYAASDEKAEL 238 Query: 240 -------DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 +D + L + T A D F +P +K + A Sbjct: 239 KPVEAPAEDELPLEKVSTPGTNTIEALCD------FLKVPADKTIKA 279 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 62/145 (42%), Positives = 89/145 (61%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE G +F GTKYS M ATF +GK+ + MG YGIG R +AA IE ++D +GI+ Sbjct: 406 RGIEAGQVFTLGTKYSKAMGATFLDENGKEQPLVMGCYGIGVGRTMAAAIEQNNDDQGIV 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++APF++ ++ + A + E IY K G DV DD E+ G +F DL+G Sbjct: 466 WPRAIAPFEVVVVAVNAKKEEQLTYAEGIYDECRKAGLDVLLDDRKERAGVKFKDCDLIG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTG 424 +P++V +G K V + +E+K R TG Sbjct: 526 YPVRVTIGPKAVDEDIIEVKVRKTG 550 >gi|312128280|ref|YP_003993154.1| prolyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311778299|gb|ADQ07785.1| prolyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 572 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDRSGAQEVHMSALMPKELWEESGRWAVFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ +G SY KM+ + Sbjct: 121 EISSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDIDEKGLDISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF R GL + A++G +GG SHEF+V + GE ++ +C Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYC 224 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 101/183 (55%), Gaps = 1/183 (0%) Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +A ++ + L K RGIEVGHIF GTKY+ + + G+ + MG Sbjct: 378 FADLRNITQDDLCPKCRSQKVTIERGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLMIMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R AA+IE HD GIIWP +VAP+++ ++ + D+ +IY L K Sbjct: 438 CYGIGINRTAAAIIEQMHDEDGIIWPITVAPYEVIVVPVNVKDENQNKIAFEIYENLQKN 497 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +F ADL+G P +V VG K +S+ K+EI++R T ++ +E+ I Sbjct: 498 GVEVLIDDRDERAGVKFKDADLIGIPFRVTVGKK-ISEGKLEIRNRRTKESFEVEIEKAI 556 Query: 436 NYA 438 + Sbjct: 557 EFV 559 >gi|45656749|ref|YP_000835.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|81830828|sp|Q72U06|SYP_LEPIC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|45599985|gb|AAS69472.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 576 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 114/225 (50%), Positives = 158/225 (70%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SKY LP +ENP DA +ASH+LM+R G++ + S G+Y +LPLG K L + I+REE Sbjct: 1 MKASKYILPTEKENPADAVVASHRLMIRAGLVRKSSAGLYFYLPLGLKVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N TGA+E +P L +D W +SGR+ + GKEM R+ DR+D + GPTHEE + + + Sbjct: 61 MNSTGALEFDLPILTPSDFWEQSGRWSAMGKEMFRIQDRHDLSYALGPTHEESFSFLLKP 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPRFGV+RSREF+MKDAYSF + +Y M V+ Sbjct: 121 LLKSYKDLPVNVYQIQTKFRDEIRPRFGVIRSREFIMKDAYSFHIDDSSLDDTYQAMRVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFCS 224 Y +IF R GLK+IP++A+SG +GG S EF+V++ G ET + C+ Sbjct: 181 YRKIFDRCGLKTIPVQADSGSMGGSASEEFMVVSPIGEETLLLCN 225 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 84/145 (57%), Gaps = 3/145 (2%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + +GIEVGHIF G KY+ +GK + G YGIG R +A VIE +D KG Sbjct: 402 AEKGIEVGHIFKLGDKYTKAFGIQVLDQNGKSKTLTTGCYGIGVNRTMATVIEQCNDEKG 461 Query: 338 IIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 I WP S+APF++SL++I K DQ + E+ Y L G +VFWDD G + ++ Sbjct: 462 IFWPISIAPFEVSLVSIVKGEDQYSK--IEEFYNVLINEGIEVFWDDRDLGPGFKLKDSE 519 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L+GFP+++ +G KF ++ I +R Sbjct: 520 LIGFPIRITIGKKFFESGEISIYNR 544 >gi|312794183|ref|YP_004027106.1| prolyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181323|gb|ADQ41493.1| prolyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 572 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDRSGAQEVHMSALMPKELWEESGRWAVFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ +G SY KM+ + Sbjct: 121 EITSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDIDEKGLDISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF R GL + A++G +GG SHEF+V + GE ++ +C Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYC 224 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 13/240 (5%) Query: 199 SGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAA 258 +GPIG + V AD K +F + + TD+ I ++ + +A Sbjct: 333 AGPIGLSID----VYADNE------VKYLKNFVVGANKTDYH--IKNVNLSDFKVTKFAD 380 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 ++ + L K RGIEVGHIF GTKY+ + + G+ + MG YG Sbjct: 381 LRNITQDDLCPKCRSQKVTIERGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLMIMGCYG 440 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R AA+IE HD GIIWP +VAP+++ ++ + +D+ +IY +L K G + Sbjct: 441 IGINRTAAAIIEQMHDEDGIIWPITVAPYEVIVVPVNVNDENQNKIAFEIYEKLQKNGVE 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +F ADL+G P +V VG K VS+ K+EI++R T ++ +E+ I + Sbjct: 501 VLIDDRDERAGVKFKDADLIGIPFRVTVGKK-VSEGKLEIRNRRTKESFEVEIEKAIEFV 559 >gi|329733665|gb|EGG69993.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21193] Length = 567 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|57651833|ref|YP_186139.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|81175020|sp|Q5HGG8|SYP_STAAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|57286019|gb|AAW38113.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] Length = 567 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|120612314|ref|YP_971992.1| prolyl-tRNA synthetase [Acidovorax citrulli AAC00-1] gi|152074741|sp|A1TTD0|SYP_ACIAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120590778|gb|ABM34218.1| prolyl-tRNA synthetase [Acidovorax citrulli AAC00-1] Length = 581 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 116/226 (51%), Positives = 157/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFVSTLKEAPADAEVVSHKLMTRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+ W E+GR+D G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVEVTMPVVQPAEYWQETGRFDKMGPELLRIRDRHGRDFVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD +K SY M + Sbjct: 121 ELRSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQAAAKASYQVMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y RIF R GL + A+SG IGGDLS EF V+A TGE V+C + Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPQ 226 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 77/167 (46%), Positives = 107/167 (64%), Gaps = 5/167 (2%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K A RGIEVGH+FY GTKYS M+ATF G DGK + +MG Sbjct: 393 VADLRNVVAGDPSPDGKGTLAIERGIEVGHVFYLGTKYSRAMNATFLGEDGKPAFFEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSK 374 YGIG R+ AA IE +HD +GIIWPD++APF + + I + D+V R A EK++A L Sbjct: 453 YGIGITRLPAAAIEQNHDERGIIWPDAIAPFTVVVCPIGMDRSDEV-RAAAEKLHADLLT 511 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD GE+ G+ FA +L+G P +V++ + + + +VE +HR Sbjct: 512 AGVDVILDDRGERPGAMFADWELIGVPHRVVLSDRGLKEGQVEYQHR 558 >gi|49486102|ref|YP_043323.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|81175024|sp|Q6G9V0|SYP_STAAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|49244545|emb|CAG42974.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] Length = 567 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|15924253|ref|NP_371787.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|15926846|ref|NP_374379.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|21282875|ref|NP_645963.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|148267753|ref|YP_001246696.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150393812|ref|YP_001316487.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156979584|ref|YP_001441843.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|253315619|ref|ZP_04838832.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253733499|ref|ZP_04867664.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|255006050|ref|ZP_05144651.2| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795681|ref|ZP_05644660.1| prolyl-tRNA synthetase [Staphylococcus aureus A9781] gi|258416084|ref|ZP_05682352.1| prolyl-tRNA synthetase [Staphylococcus aureus A9763] gi|258421667|ref|ZP_05684591.1| prolyl-tRNA synthetase [Staphylococcus aureus A9719] gi|258434823|ref|ZP_05688897.1| prolyl-tRNA synthetase [Staphylococcus aureus A9299] gi|258444601|ref|ZP_05692930.1| prolyl-tRNA synthetase [Staphylococcus aureus A8115] gi|258447566|ref|ZP_05695710.1| prolyl-tRNA synthetase [Staphylococcus aureus A6300] gi|258449408|ref|ZP_05697511.1| prolyl-tRNA synthetase [Staphylococcus aureus A6224] gi|258454787|ref|ZP_05702751.1| prolyl-tRNA synthetase [Staphylococcus aureus A5937] gi|269202880|ref|YP_003282149.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282892751|ref|ZP_06300986.1| prolyl-tRNA synthetase [Staphylococcus aureus A8117] gi|295406200|ref|ZP_06816007.1| prolyl-tRNA synthetase [Staphylococcus aureus A8819] gi|296274821|ref|ZP_06857328.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1] gi|297208091|ref|ZP_06924522.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297244428|ref|ZP_06928311.1| prolyl-tRNA synthetase [Staphylococcus aureus A8796] gi|300912172|ref|ZP_07129615.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|81175021|sp|Q99UK9|SYP_STAAM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81175022|sp|Q7A5Y3|SYP_STAAN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81175025|sp|Q7A120|SYP_STAAW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980161|sp|A7X1P3|SYP_STAA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189083516|sp|A6U182|SYP_STAA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189083517|sp|A5ISE7|SYP_STAA9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|13701063|dbj|BAB42358.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus N315] gi|14247033|dbj|BAB57425.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus Mu50] gi|21204314|dbj|BAB95011.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus MW2] gi|147740822|gb|ABQ49120.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|149946264|gb|ABR52200.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156721719|dbj|BAF78136.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus Mu3] gi|253728553|gb|EES97282.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|257789653|gb|EEV27993.1| prolyl-tRNA synthetase [Staphylococcus aureus A9781] gi|257839232|gb|EEV63708.1| prolyl-tRNA synthetase [Staphylococcus aureus A9763] gi|257842353|gb|EEV66778.1| prolyl-tRNA synthetase [Staphylococcus aureus A9719] gi|257849184|gb|EEV73166.1| prolyl-tRNA synthetase [Staphylococcus aureus A9299] gi|257850094|gb|EEV74047.1| prolyl-tRNA synthetase [Staphylococcus aureus A8115] gi|257853757|gb|EEV76716.1| prolyl-tRNA synthetase [Staphylococcus aureus A6300] gi|257857396|gb|EEV80294.1| prolyl-tRNA synthetase [Staphylococcus aureus A6224] gi|257863170|gb|EEV85934.1| prolyl-tRNA synthetase [Staphylococcus aureus A5937] gi|262075170|gb|ACY11143.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282764748|gb|EFC04873.1| prolyl-tRNA synthetase [Staphylococcus aureus A8117] gi|285816945|gb|ADC37432.1| Prolyl-tRNA synthetase [Staphylococcus aureus 04-02981] gi|294968788|gb|EFG44810.1| prolyl-tRNA synthetase [Staphylococcus aureus A8819] gi|296887334|gb|EFH26236.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178458|gb|EFH37704.1| prolyl-tRNA synthetase [Staphylococcus aureus A8796] gi|300886418|gb|EFK81620.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|312829657|emb|CBX34499.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315131057|gb|EFT87041.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03] gi|329727670|gb|EGG64126.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21172] Length = 567 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|320335266|ref|YP_004171977.1| prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] gi|319756555|gb|ADV68312.1| prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] Length = 504 Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 153/485 (31%), Positives = 227/485 (46%), Gaps = 66/485 (13%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S + + P +A++ASH+ ++R G + + G+Y+ LPL + + A++ E Sbjct: 1 MRWSALWAFTSRAMPSEADVASHQWLVRAGFVERVGAGLYASLPLMSRVEARLEALVHAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE--MLRLADRNDKAMIYGPTHEEVMTDIF 118 GA E+ +P LQ A LW SGR+D+Y E M LADR +A+ PTHEE + + Sbjct: 61 MRAVGAQEVRLPMLQPAALWAASGRWDAYRAEGLMFSLADRAGRALTLAPTHEEAVAFLA 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 R ++ +LP YQ+ KFRDELRPR G++R+REF MKDAYS ++ M Sbjct: 121 RG-LRREADLPKVVYQVGRKFRDELRPRGGLLRAREFTMKDAYSVHADEVSLAGTFEAMS 179 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 +Y R+ LG+ + A+SG IGG +S EF+VL+D GE V + D + + + Sbjct: 180 GAYARLLGALGVPWRAVEADSGSIGGAVSREFMVLSDIGEDTVLTAPDGVAVNVERAVSL 239 Query: 239 FDDIISLNSIVEQWTAPYA---------------ATSDVHNEKLFDSLPENKRVSAR--- 280 D + + V+ WT +A A + V ++ L V AR Sbjct: 240 PDAAPGVGARVDAWTVTFADGAVVGVRVRVRADHAVNGVKLARVVAGLSGQAVVDAREGI 299 Query: 281 -------------GIEVG-------------------------------HIFYFGTKYSL 296 G+ VG H F G +Y+ Sbjct: 300 AAVQFEVTDGACPGVGVGAVADVRVARAGERTAHAPQQRWVAARGIEVGHAFQLGARYTE 359 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A F GADG MG YGIG R+ AV E + DG G+ WP +APF + + + Sbjct: 360 ALGARFVGADGSSRAPLMGCYGIGVSRLAQAVAEVTCDGWGLNWPAVIAPFGVVVTVTNS 419 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D R+A E++Y L G D DD E+ G + A+++G PL+V VG + V Sbjct: 420 ADAAQREAGERVYGALVAAGVDALLDDRAERAGVKLRDAEMIGVPLRVTVGRDLAA-GNV 478 Query: 417 EIKHR 421 E+ R Sbjct: 479 ELFTR 483 >gi|302332869|gb|ADL23062.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159] Length = 567 Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 108/166 (65%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV+PF + LI+I R+ +++YA+ ++ DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVSPFDVHLISINPKKDDQRELADQLYAKFNE-KFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|167039496|ref|YP_001662481.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300915254|ref|ZP_07132569.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307725178|ref|YP_003904929.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|226701350|sp|B0K5F2|SYP_THEPX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166853736|gb|ABY92145.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300888978|gb|EFK84125.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307582239|gb|ADN55638.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X513] Length = 570 Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V I+REE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+NKM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDVDWEGLDKSFNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF R GLK + + A+SG +GG S EF+V++ GE + +C Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISSIGEAVIAYC 224 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 70/156 (44%), Positives = 94/156 (60%), Gaps = 1/156 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + A + +G + + MG YGIG R VAA+IE HD KGII Sbjct: 405 RGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIIMGCYGIGINRTVAAIIEQHHDEKGII 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP SVAP+ + ++ + ++ E IYA L K G +V DD + G +F ADLLG Sbjct: 465 WPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRAGVKFNDADLLG 524 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 P+++ VG K V D VEIK R E++ + +V+ Sbjct: 525 IPIRITVGKK-VDDGIVEIKLRENEEAEEVKISDVV 559 >gi|282927605|ref|ZP_06335221.1| prolyl-tRNA synthetase [Staphylococcus aureus A10102] gi|282590608|gb|EFB95685.1| prolyl-tRNA synthetase [Staphylococcus aureus A10102] Length = 567 Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|256752497|ref|ZP_05493354.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256748632|gb|EEU61679.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 570 Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V I+REE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+NKM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDVDWEGLDKSFNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF R GLK + + A+SG +GG S EF+V++ GE + +C Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISSIGEAVIAYC 224 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 70/156 (44%), Positives = 94/156 (60%), Gaps = 1/156 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + A + +G + + MG YGIG R VAA+IE HD KGII Sbjct: 405 RGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIIMGCYGIGINRTVAAIIEQHHDEKGII 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP SVAP+ + ++ + ++ E IYA L K G +V DD + G +F ADLLG Sbjct: 465 WPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRAGVKFNDADLLG 524 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 P+++ VG K V D VEIK R E++ + +V+ Sbjct: 525 IPIRITVGKK-VDDGIVEIKLRENEEAEEVKISDVV 559 >gi|332637693|ref|ZP_08416556.1| prolyl-tRNA synthetase [Weissella cibaria KACC 11862] Length = 573 Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 114/218 (52%), Positives = 152/218 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE+ SH++MLR G + S G+Y++LPL Q+ L+ +NAIIREE Sbjct: 1 MKQSKVFIPTLRETPADAEVISHQMMLRAGYMRPVSAGVYAYLPLAQRVLNKINAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + AIEMS P L A++W ESGRY++YG + +L +R+D+ MI GPTHEE MT + R Sbjct: 61 MEKIDAIEMSAPMLLPAEMWQESGRYETYGPNLFKLKNRHDRDMILGPTHEETMTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFGV+R REF+MKDAYSF + +G SY M + Sbjct: 121 DIKSYKRLPLTVYQIQTKFRDENRPRFGVLRGREFIMKDAYSFSVDQDGLDESYKNMESA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y+ IF R+GL + ++G +GG S EF A+ GE Sbjct: 181 YINIFDRIGLDYRVIVGDAGAMGGSDSKEFSAPAEAGE 218 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 95/157 (60%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIE+GHIF GT+YS M A A+G+ V MGSYGIG R++AA+ E + D G+ Sbjct: 404 KGIEIGHIFKLGTRYSKSMGAQVLDANGRQADVIMGSYGIGVSRLLAAIAEQNADENGLA 463 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP SVAP+ + L+ +K D+ R +++ +L + G +V DD E+ G +F +DL+G Sbjct: 464 WPTSVAPWDVHLVPMKYSDETQRALTDELNDKLVEAGYEVLVDDRNERAGVKFNDSDLIG 523 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 P++V +G K + VE+K R ++ EE+++ Sbjct: 524 LPVRVTIGKK-AGEGIVEVKLRKADEAIEVRTEELVS 559 >gi|302871195|ref|YP_003839831.1| prolyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302574054|gb|ADL41845.1| prolyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 572 Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDRSGAQEVHMSALMPKELWEESGRWAIFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ +G SY KM+ + Sbjct: 121 EISSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDIDEKGLDISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF R GL + A++G +GG SHEF+V + GE ++ +C Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYC 224 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/168 (39%), Positives = 94/168 (55%), Gaps = 1/168 (0%) Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +A ++ + L K RGIEVGHIF GTKY+ + G+ ++ MG Sbjct: 378 FADLRNITQDDLCPKCRSQKVTIERGIEVGHIFKLGTKYTEAFGCVYTDEKGEKKFMIMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R AA+IE HD GIIWP +VAP+++ ++ + D+ +IY L K Sbjct: 438 CYGIGINRTAAAIIEQMHDEDGIIWPITVAPYEVIVVPVNVKDENQSKIAFEIYENLQKN 497 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 G +V DD E+ G +F ADL+G P +V VG K VS+ K+EI++R T Sbjct: 498 GVEVLIDDRDERAGVKFKDADLIGIPFRVTVGKK-VSEGKIEIRNRRT 544 >gi|24215989|ref|NP_713470.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] gi|81846319|sp|Q8F148|SYP_LEPIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|24197213|gb|AAN50488.1|AE011490_3 prolyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] Length = 576 Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 114/225 (50%), Positives = 158/225 (70%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SKY LP +ENP DA +ASH+LM+R G++ + S G+Y +LPLG K L + I+REE Sbjct: 1 MKASKYILPTEKENPADAVVASHRLMIRAGLVRKSSAGLYFYLPLGLKVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N TGA+E +P L +D W +SGR+ + GKEM R+ DR+D + GPTHEE + + + Sbjct: 61 MNSTGALEFDLPILTPSDFWEQSGRWSAMGKEMFRIQDRHDLSYALGPTHEESFSFLLKP 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPRFGV+RSREF+MKDAYSF + +Y M V+ Sbjct: 121 LLKSYKDLPVNVYQIQTKFRDEIRPRFGVIRSREFIMKDAYSFHIDDSSLDDTYQAMRVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFCS 224 Y +IF R GLK+IP++A+SG +GG S EF+V++ G ET + C+ Sbjct: 181 YRKIFDRCGLKTIPVQADSGSMGGSASEEFMVVSPIGEETLLLCN 225 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 85/145 (58%), Gaps = 3/145 (2%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + +GIEVGHIF G KY+ +GK + MG YGIG R +A VIE +D KG Sbjct: 402 AEKGIEVGHIFKLGDKYTKAFGIQVLDQNGKSKTLTMGCYGIGVNRTMATVIEQCNDEKG 461 Query: 338 IIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 I WP S+APF++SL++I K DQ + E+ Y L G +VFWDD G + ++ Sbjct: 462 IFWPISIAPFEVSLVSIVKGEDQYFK--IEEFYNVLMNEGIEVFWDDRDLGPGFKLKDSE 519 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L+GFP+++ +G KF ++ I +R Sbjct: 520 LIGFPIRITIGKKFFESGEISIYNR 544 >gi|303232046|ref|ZP_07318749.1| proline--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] gi|302513152|gb|EFL55191.1| proline--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] Length = 572 Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 113/225 (50%), Positives = 158/225 (70%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+E P DA++ S +LMLR G + + + G+YS+LPLG +++ + AIIREE Sbjct: 1 MLASKLYAPTLREVPSDADVVSQQLMLRAGFMRKVANGLYSFLPLGWRSIKKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRSGAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDVEYCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKD YSFD+ + SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDGYSFDIDDAAADVSYKNMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CS 224 Y RIF R GL P+ A+SG IGG +HEF+ +A+ GE + CS Sbjct: 181 YSRIFTRCGLTFRPVEADSGAIGGSNTHEFMAIAEAGEADIIHCS 225 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 61/156 (39%), Positives = 93/156 (59%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++GIEVG +F GTKYS + AT+ +G+ + + MG YGIG R +AA IE HD GI Sbjct: 406 SKGIEVGQVFKLGTKYSESLQATYLDQNGRPNAMVMGCYGIGVSRTLAAAIEQYHDENGI 465 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP ++APF++ ++ I A D+ IY L DV DD ++ G +F ADL+ Sbjct: 466 VWPRAIAPFEVVIVPINAKDEALMSTSTSIYDTLLNNKVDVLLDDRKDRAGVKFKDADLI 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G+PL++ V + ++VEI+ R TG + ++EV Sbjct: 526 GYPLRITVSKNTLESNEVEIRVRKTGEAINCPIDEV 561 >gi|312134482|ref|YP_004001820.1| prolyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] gi|311774533|gb|ADQ04020.1| prolyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] Length = 572 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDRSGAQELHMSALMPKELWEESGRWAVFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ +G SY KM+ + Sbjct: 121 EITSYRELPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDIDEKGLDISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF R GL + A++G +GG SHEF+V + GE ++ +C Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYC 224 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/168 (39%), Positives = 93/168 (55%), Gaps = 1/168 (0%) Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +A ++ + L K RGIEVGHIF GTKY+ + G+ + MG Sbjct: 378 FADLRNITQDDLCPKCRSQKVTIERGIEVGHIFKLGTKYTEAFGCVYTDEKGEKKLMIMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R AA+IE HD GIIWP +VAP+++ ++ + D+ +IY L K Sbjct: 438 CYGIGINRTAAAIIEQMHDEDGIIWPITVAPYEVIVVPVNIKDENQHKIAFEIYENLQKN 497 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 G +V DD E+ G +F ADL+G P +V VG K VS+ K+EI++R T Sbjct: 498 GIEVLIDDRDERAGVKFKDADLIGIPFRVTVGKK-VSEGKLEIRNRRT 544 >gi|332528434|ref|ZP_08404426.1| prolyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] gi|332042113|gb|EGI78447.1| prolyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] Length = 581 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 114/224 (50%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ + L+E P DAE+ SH+LM R GMI + GIY+++P+G + ++ V AI+REE Sbjct: 1 MKASQFLISTLKEAPADAEVVSHQLMTRAGMIKKLGAGIYTYMPMGLRVINKVAAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+++P +Q A+LW E+GR++ G E+LR+ DR+++ + PT EEV+TDI R Sbjct: 61 MNRAGAIELTMPVIQPAELWQETGRFEKMGPELLRIQDRHERDFVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD P ++ SY M + Sbjct: 121 EFKSYKQLPRNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDPASAQISYQAMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y F R GL+ + A+SG IGGDLS EF V+A TGE ++C Sbjct: 181 YRAAFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIIYC 224 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 78/168 (46%), Positives = 104/168 (61%), Gaps = 3/168 (1%) Query: 257 AATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D P+ K V A RGIE+GHIFY GTKYS M+ATF +GK + +M Sbjct: 391 ALVADLRNVVEGDLSPDGKGVLAIERGIEIGHIFYLGTKYSKAMNATFLDENGKPQFFEM 450 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG R+ AA IE +HD KGIIWPD++APF + + I + A EK+YA L Sbjct: 451 GCYGIGITRLPAAAIEQNHDAKGIIWPDAIAPFTVVVCPINPDRSPEVKTAAEKLYAELL 510 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD GE+ G+ FA +L+G P +V +G + + + KVE +HR Sbjct: 511 AAGVDVILDDRGERPGAMFADWELIGVPHRVTIGDRTLKEGKVEYQHR 558 >gi|228474993|ref|ZP_04059721.1| proline--tRNA ligase [Staphylococcus hominis SK119] gi|228270978|gb|EEK12366.1| proline--tRNA ligase [Staphylococcus hominis SK119] Length = 566 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L++++ IIREE Sbjct: 1 MKQSKVFIPTMREVPSEAEALSHQLLLKAGLIKQSTSGIYSYLPLATRVLNHISRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T I R Sbjct: 61 MENIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y +M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQEMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + S++ Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGHHTHEFMALSEIGEDTIVYSEN 226 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 67/159 (42%), Positives = 98/159 (61%), Gaps = 2/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+A F GK + MG YGIG R ++A++E ++D GI Sbjct: 402 AEGIEVGQVFKLGTKYSEAMNAKFIDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SV PF + LI I + + +K+Y+ L + DV +DD E+ G +F ADL+ Sbjct: 462 IWPKSVTPFDLHLITINPKKEEQLELGDKLYSEL-QSKYDVLYDDRKERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P++++VG K S+ VE+K R TG E++ + E+ N+ Sbjct: 521 GLPIRIVVG-KNASEGIVEVKVRQTGESEEVHINELDNH 558 >gi|303234780|ref|ZP_07321406.1| proline--tRNA ligase [Finegoldia magna BVS033A4] gi|302494121|gb|EFL53901.1| proline--tRNA ligase [Finegoldia magna BVS033A4] Length = 576 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 115/235 (48%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K+++P L+E+P+DAEIASHKL+LR GMI + + G+YS+LPLG + + V I+REE Sbjct: 1 MRMNKFYMPTLREDPQDAEIASHKLLLRAGMIRKTAAGLYSYLPLGYRIVRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E+ +P Q ++W ESGR+ ++G EM +L DRN++ GPT EE TD+ + Sbjct: 61 MDNYGSQEIHMPVTQPREIWEESGRWKTFGPEMFKLKDRNNREFCLGPTAEEYFTDLVKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFG+ RSREFLM+DAY+FD+ E +Y M+ + Sbjct: 121 EIKSYKQLPLNIYQIQTKYRDEKRPRFGINRSREFLMQDAYTFDVNEEAMGEAYMNMWRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +F+RLGL+ + +SG +GG+ SHEFI L+D GE V C D DF E Sbjct: 181 YEVVFNRLGLEYKIVAGDSGAMGGNSSHEFIALSDVGEG-VICYSDDSDFAATDE 234 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 67/154 (43%), Positives = 92/154 (59%), Gaps = 1/154 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVG+IF G KYS M+ATF +GK+ + MGSYGIG R V+A++E +HD KG+I Sbjct: 403 RGIEVGNIFQLGQKYSKSMNATFLDENGKEQFFWMGSYGIGVTRSVSAIVEQNHDDKGMI 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP VAP+ + + + D+ EK+Y +L G +V DD E++G +F DL+G Sbjct: 463 WPLVVAPYHVIITIVNTKDEEQNTLAEKLYEKLLLQGVEVLLDDRKERVGVKFNDRDLIG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 PL++ VG K D VE R T +MS E Sbjct: 523 IPLRITVGKKAAEDI-VEFSERRTLENVEMSSTE 555 >gi|253731882|ref|ZP_04866047.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724292|gb|EES93021.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 567 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 161/226 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRRFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|222528589|ref|YP_002572471.1| prolyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] gi|254782881|sp|B9MPD7|SYP_ANATD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|222455436|gb|ACM59698.1| prolyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 572 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDRSGAQEVHMSALMPKELWEESGRWAVFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ G SY KM+ + Sbjct: 121 EISSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDIDENGLDISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF R GL + A++G +GG SHEF+V + GE ++ +C Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYC 224 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 4/179 (2%) Query: 260 SDVHNEKLFDSLPE---NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF GTKY+ + + G+ + MG Sbjct: 379 TDLRNITQDDLCPKCRSQKVTIERGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLMIMGC 438 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R AA+IE HD GIIWP +VAP+++ ++ + D+ + +IY L + G Sbjct: 439 YGIGINRTAAAIIEQMHDEDGIIWPITVAPYEVIIVPVNVKDENQKKIAFEIYENLQRNG 498 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +V DD E+ G +F ADL+G P +V VG K +S+ K+EI++R T ++ +E+ I Sbjct: 499 VEVLIDDRDERAGVKFKDADLIGIPFRVTVGKK-ISEGKLEIRNRRTKESFEVEIEKAI 556 >gi|314936576|ref|ZP_07843923.1| proline--tRNA ligase [Staphylococcus hominis subsp. hominis C80] gi|313655195|gb|EFS18940.1| proline--tRNA ligase [Staphylococcus hominis subsp. hominis C80] Length = 566 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L++++ IIREE Sbjct: 1 MKQSKVFIPTMREVPSEAEALSHQLLLKAGLIKQSTSGIYSYLPLATRVLNHISRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T I R Sbjct: 61 MENIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y +M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQEMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + S++ Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGHHTHEFMALSEIGEDTIVYSEN 226 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 67/159 (42%), Positives = 98/159 (61%), Gaps = 2/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+A F GK + MG YGIG R ++A++E ++D GI Sbjct: 402 AEGIEVGQVFKLGTKYSEAMNAKFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SV PF + LI I + + +K+Y+ L + DV +DD E+ G +F ADL+ Sbjct: 462 IWPKSVTPFDLHLITINPKKEEQLELGDKLYSEL-QSKYDVLYDDRKERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P++++VG K S+ VE+K R TG E++ + E+ N+ Sbjct: 521 GLPIRIVVG-KNASEGIVEVKVRQTGESEEVHINELDNH 558 >gi|303228556|ref|ZP_07315384.1| proline--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] gi|302516803|gb|EFL58717.1| proline--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] Length = 572 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 113/225 (50%), Positives = 158/225 (70%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+E P DA++ S +LMLR G + + + G+YS+LPLG +++ + AIIREE Sbjct: 1 MLASKLYAPTLREVPSDADVVSQQLMLRAGFMRKVANGLYSFLPLGWRSIKKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRSGAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDVEYCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKD YSFD+ + SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDGYSFDIDDAAADVSYKNMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CS 224 Y RIF R GL P+ A+SG IGG +HEF+ +A+ GE + CS Sbjct: 181 YSRIFTRCGLTFRPVEADSGAIGGSNTHEFMAIAEAGEADIIHCS 225 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 64/165 (38%), Positives = 95/165 (57%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++GIEVG +F GTKYS + AT+ +G+ + + MG YGIG R +AA IE HD GI Sbjct: 406 SKGIEVGQVFKLGTKYSESLQATYLDQNGRPNAMVMGCYGIGVSRTLAAAIEQYHDENGI 465 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP ++APF++ ++ I A D+ IY L DV DD ++ G +F ADL+ Sbjct: 466 IWPRAIAPFEVVIVPINAKDEALMSTSTSIYDTLLNNKVDVLLDDRKDRAGVKFKDADLI 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G+PL++ V + ++VEI+ R TG + ++EV N S Sbjct: 526 GYPLRITVSKNTLESNEVEIRVRKTGEAINCPIDEVSNKVQELLS 570 >gi|317052052|ref|YP_004113168.1| prolyl-tRNA synthetase [Desulfurispirillum indicum S5] gi|316947136|gb|ADU66612.1| prolyl-tRNA synthetase [Desulfurispirillum indicum S5] Length = 572 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 153/226 (67%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FL +E P DAE+ SH+LMLR G I + + GIYS+LPL + L + IIREE Sbjct: 1 MRYSQAFLFTAKETPSDAEVISHQLMLRGGYIKKTAAGIYSYLPLAWRVLRKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA E+ +P A+LW+ESGR+ YG E+LR DR+ + GPTHEE +TDI R Sbjct: 61 MTREGAEELMMPAALPAELWMESGRWQKYGPELLRFQDRHGRDFCIGPTHEEAITDIVRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP YQIQ KFRDE+RPRFG+MR REF+MKD YSFD+ E S +Y KM+ + Sbjct: 121 AVSSYRHLPKNLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFDVDDEASATTYEKMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSK 225 Y IF R GL + A+SG IGG SHEF+VLA++GE + CSK Sbjct: 181 YSSIFRRCGLSFKAVEADSGQIGGSFSHEFMVLANSGEDGIASCSK 226 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/156 (41%), Positives = 95/156 (60%), Gaps = 2/156 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F GT YS M AT+ +GK+ + MG YGIG R AA IE +HD KGII Sbjct: 402 RGIEVGHVFRLGTVYSQSMKATYLDRNGKEQPMVMGCYGIGVGRTAAAAIEQNHDDKGII 461 Query: 340 WPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP S+AP+++ + + + D+ R + +Y RL+ CDV +DD E+ G +F ++L+ Sbjct: 462 WPMSIAPYQVVICTVNPSRDEQSRATADSLYERLAAT-CDVLYDDRDERPGVKFIDSELI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ + K + S VEI R +G + LE + Sbjct: 521 GIPLRLTISQKTLEQSSVEITIRKSGEKYLHPLETI 556 >gi|258423896|ref|ZP_05686781.1| prolyl-tRNA synthetase [Staphylococcus aureus A9635] gi|257845925|gb|EEV69954.1| prolyl-tRNA synthetase [Staphylococcus aureus A9635] Length = 567 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 70/166 (42%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ E +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELAEALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|194364305|ref|YP_002026915.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] gi|226701341|sp|B4SJ64|SYP_STRM5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|194347109|gb|ACF50232.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] Length = 567 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 151/224 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V I+REE Sbjct: 1 MRLSQFHLHTTKETPSDAELTSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E +PT+Q +LW ++GR+ +G ++L++ DR D+ Y PT EE D RS Sbjct: 61 MDRAGAVEFQIPTIQPKELWEQTGRWQKFGPQLLKIKDRKDQTFCYSPTAEEAACDFARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E Y M + Sbjct: 121 ELSSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFHLHDECLVREYENMKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + S Sbjct: 181 YSRIFTRLGLDFRMVQADSGAIGGDASQEFHVIADSGEDALVFS 224 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 4/166 (2%) Query: 259 TSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N + D +L + ARGIEVGH+F G Y+ + AT +GK + MG Y Sbjct: 384 VADIRNVRAGDRALDGGELKIARGIEVGHVFQLGRTYARALDATVLDENGKAAVMAMGCY 443 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKV 375 GIG RVVAA IE +HD GIIWPD++AP++ + +IN K D DA + L Sbjct: 444 GIGISRVVAAAIEQNHDDAGIIWPDAMAPWQVVVCVINPKG-DAAVADAATNLLQELRDA 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G D DD G + G+ FA +L+G P +V+V + ++ E + R Sbjct: 503 GLDAALDDRGLRPGAMFADMELIGIPHRVVVSERGLAAGTYEYRSR 548 >gi|283470478|emb|CAQ49689.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398] Length = 567 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|282903818|ref|ZP_06311706.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282595436|gb|EFC00400.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus C160] Length = 567 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|15896426|ref|NP_349775.1| prolyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|81854743|sp|Q97ED5|SYP_CLOAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|15026247|gb|AAK81115.1|AE007813_2 Prolyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|325510583|gb|ADZ22219.1| prolyl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 570 Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 124/265 (46%), Positives = 169/265 (63%), Gaps = 10/265 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E+P +AEI SHKLMLR+GMI + + G+Y+++PLG KAL V IIREE Sbjct: 1 MKMSNMLMLTLRESPAEAEIESHKLMLRSGMIRKMASGVYNYMPLGLKALKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E L ++LW ESGR++ +G EM +L DRN++ GPTHEEV TD RS Sbjct: 61 MNAAGAQEFLASALLPSELWKESGRWEVFGPEMFKLKDRNEREFCLGPTHEEVFTDFARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFG++RSREF+MKDAYSFD EG SYNKM+ + Sbjct: 121 EIKSYKQLPVNLYQIQTKYRDERRPRFGMIRSREFVMKDAYSFDKDNEGLDVSYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSK-----DFMDFPIPS 234 Y +IF R + + A+SG +GG S EF+V ++ GE ++ FC++ + P Sbjct: 181 YTKIFKRCNVSCSAVAADSGAMGGSGSAEFMVKSEIGEDEIAFCTECNYAANIEKAPAVP 240 Query: 235 ENTDFDDIISLNSIVEQWTAPYAAT 259 E D +++ L + P+A T Sbjct: 241 EKADKEELGELKKV----ETPHAKT 261 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 74/173 (42%), Positives = 103/173 (59%), Gaps = 5/173 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGHIF GTKYS M A F +G+ + MG YGIG R ++AV+E HD GI Sbjct: 400 ARGIEVGHIFKLGTKYSEAMKAYFVDENGESKPLIMGCYGIGVNRTMSAVVEQHHDDNGI 459 Query: 339 IWPDSVAPFKISLIN--IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +WP SVAP+++ ++ K+ +Q+ EK+Y L K+G D DD E+ G +F AD Sbjct: 460 VWPLSVAPYEVIVVPAVFKSEEQM--KEAEKLYTELKKIGVDALLDDRNERAGVKFKDAD 517 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K +S+ KVE K R + E + L++VI F N L Sbjct: 518 LIGIPMRITVGKK-ISEGKVEFKCRNSEEVEVIDLDKVIARVEEEFEKNNLAL 569 >gi|49483426|ref|YP_040650.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425317|ref|ZP_05601742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257427978|ref|ZP_05604376.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430611|ref|ZP_05606993.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257433371|ref|ZP_05609729.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257436213|ref|ZP_05612260.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282905581|ref|ZP_06313436.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908556|ref|ZP_06316386.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910835|ref|ZP_06318638.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914040|ref|ZP_06321827.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282918962|ref|ZP_06326697.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282924085|ref|ZP_06331761.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|283958006|ref|ZP_06375457.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|293501072|ref|ZP_06666923.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|293510034|ref|ZP_06668742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|293526620|ref|ZP_06671305.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|295427750|ref|ZP_06820382.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591292|ref|ZP_06949930.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|81175023|sp|Q6GHH2|SYP_STAAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|49241555|emb|CAG40241.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271774|gb|EEV03912.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257274819|gb|EEV06306.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278739|gb|EEV09358.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257281464|gb|EEV11601.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257284495|gb|EEV14615.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282314057|gb|EFB44449.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282316772|gb|EFB47146.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282322108|gb|EFB52432.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282325440|gb|EFB55749.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327618|gb|EFB57901.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330873|gb|EFB60387.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|283790155|gb|EFC28972.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|290920692|gb|EFD97755.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|291096077|gb|EFE26338.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|291466978|gb|EFF09496.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|295128108|gb|EFG57742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576178|gb|EFH94894.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|312438357|gb|ADQ77428.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60] gi|315194151|gb|EFU24544.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00] Length = 567 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK+ Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKE 226 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+ Sbjct: 462 VWPKSVTPFDLHLISINPKKDDQRELADALYAEFN-TKFDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+++VG K S+ VE+K RLTG E++ +++++ ++++ N Sbjct: 521 GLPLRIVVG-KRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDN 565 >gi|302335688|ref|YP_003800895.1| prolyl-tRNA synthetase [Olsenella uli DSM 7084] gi|301319528|gb|ADK68015.1| prolyl-tRNA synthetase [Olsenella uli DSM 7084] Length = 571 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 114/223 (51%), Positives = 157/223 (70%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + S+ + P L+E+P DAE+ASH+L+LR GMI + + G+YS+LPL +++ + AIIR+E Sbjct: 6 KMSRLYAPTLKEDPTDAELASHRLLLRAGMIRKGAAGLYSYLPLAWRSIRKIEAIIRDEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA EM VP L ADLW +SGR++ YG E++R+ DR+ + GPTHEE TD+ + Sbjct: 66 ETIGAQEMQVPILTDADLWHQSGRWEVYGPELMRIDDRHGHSYALGPTHEESFTDLVHNE 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +KSY+ LP T YQ+Q KFRDE RPRFG+MR REF+MKDAYSF T E + Y + +Y Sbjct: 126 LKSYKQLPVTLYQVQDKFRDERRPRFGLMRGREFIMKDAYSFSATQESLRQCYEEEKAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 RI R GL+++P+ A+SG IGGD S EF+ LAD GE + V+C Sbjct: 186 ARIAERCGLRALPVVADSGQIGGDSSVEFMALADAGEAELVYC 228 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 70/169 (41%), Positives = 96/169 (56%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 ARGIE+ +F GTKYS M ATF DG++ MG YGIG R +AAV+E HD G Sbjct: 402 GARGIEISQVFQLGTKYSEAMGATFTDEDGREKPFLMGCYGIGVSRTLAAVVEQHHDEHG 461 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I WP SVAP+++ +I + D + E++ L G +V DD E+ G +F ADL Sbjct: 462 ISWPVSVAPYEVEVIPLDVRDDLVWPVAERLATGLVDAGVEVVVDDRKERPGVKFNDADL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +GFP QV+ G K + D VE+K R TG R ++ + E + + R R Sbjct: 522 MGFPFQVVCGKKAIRDGNVELKLRATGERLELPIAEAVRAVAERVLAQR 570 >gi|169823842|ref|YP_001691453.1| prolyl-tRNA synthetase [Finegoldia magna ATCC 29328] gi|226701290|sp|B0RZJ0|SYP_FINM2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167830647|dbj|BAG07563.1| prolyl-tRNA synthetase [Finegoldia magna ATCC 29328] Length = 576 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 115/235 (48%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K+++P L+E+P+DAEIASHKL+LR GMI + + G+YS+LPLG + + V I+REE Sbjct: 1 MRMNKFYMPTLREDPQDAEIASHKLLLRAGMIRKTAAGLYSYLPLGYRIVRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E+ +P Q ++W ESGR+ ++G EM +L DRN++ GPT EE TD+ + Sbjct: 61 MDNYGSQEIHMPITQPREIWEESGRWKTFGPEMFKLKDRNNREFCLGPTAEEYFTDLVKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFG+ RSREFLM+DAY+FD+ E +Y M+ + Sbjct: 121 EIKSYKQLPLNIYQIQTKYRDEKRPRFGINRSREFLMQDAYTFDVNEEAMGEAYMNMWRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +F+RLGL+ + +SG +GG+ SHEFI L+D GE V C D DF E Sbjct: 181 YEVVFNRLGLEYKIVAGDSGAMGGNSSHEFIALSDVGEG-VICYSDDSDFAATDE 234 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 67/154 (43%), Positives = 92/154 (59%), Gaps = 1/154 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVG+IF G KYS M+ATF +GK+ + MGSYGIG R V+A++E +HD KG+I Sbjct: 403 RGIEVGNIFQLGQKYSKSMNATFLDENGKEQFFWMGSYGIGVTRSVSAIVEQNHDDKGMI 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP VAP+ + + + D+ EK+Y +L G +V DD E++G +F DL+G Sbjct: 463 WPLVVAPYHVIITIVNTKDEEQNTLAEKLYEKLLLQGVEVLLDDRKERVGVKFNDRDLIG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 PL++ VG K D VE R T +MS E Sbjct: 523 IPLRITVGKKAAEDI-VEFSERRTLENVEMSSTE 555 >gi|327398599|ref|YP_004339468.1| Prolyl-tRNA synthetase [Hippea maritima DSM 10411] gi|327181228|gb|AEA33409.1| Prolyl-tRNA synthetase [Hippea maritima DSM 10411] Length = 578 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 115/221 (52%), Positives = 157/221 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+ L+E+ ++A I SH L+LR G I + + GIY++LPLG + + V+ I+REE Sbjct: 1 MRYSESFIYTLKEDQKEAAIVSHNLLLRGGFILKLASGIYNYLPLGLRVIRKVSDIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ + +Q A+LW ESGR++ YGKE+LR+ DR D+ ++GPTHEEV+TDI R Sbjct: 61 MNKAGAQEILMAAIQPAELWKESGRWNDYGKELLRIKDRGDRDFVFGPTHEEVVTDIVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDELRPRFG+MR REF+MKDAYSFD G SY KM ++ Sbjct: 121 FVKSYKQMPLNLYQIQTKFRDELRPRFGLMRGREFIMKDAYSFDKDEAGMDVSYEKMNIA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R GL + A++G IGG S EF+VL+ TGE ++ Sbjct: 181 YHNIFRRCGLAFRSVEADTGSIGGKDSEEFMVLSQTGEDEI 221 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/180 (38%), Positives = 104/180 (57%), Gaps = 3/180 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS---ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T+D+ K + P K+ + RGIEVGHIF G KYS M+ATF +G+ MG Sbjct: 379 TADLRVVKEGELCPRCKKGTLKKIRGIEVGHIFKLGQKYSKAMNATFLDENGRSVPYYMG 438 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R A IE +HD GIIWP S+APF+I ++++ ++ + C+ +Y ++ K Sbjct: 439 CYGIGIGRTAQAAIEQNHDEYGIIWPISIAPFEIEIVSLDTRNKELVEFCDILYEQMKKE 498 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV +DD E+ G + DL+G P++VIVG K +VE+ R ++ + +EV+ Sbjct: 499 GFDVLYDDRDERAGIKLNDMDLIGIPIRVIVGKKAFEKGEVEVSLRRDRQKQSVEKDEVL 558 >gi|242373554|ref|ZP_04819128.1| prolyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] gi|242348917|gb|EES40519.1| prolyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] Length = 567 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 159/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ I+REE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKRLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDATYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG+ +HEF+ L++ GE + S + Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSNE 226 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 71/166 (42%), Positives = 102/166 (61%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GI Sbjct: 402 AEGIEVGQVFKLGTKYSEAMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNNDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SV PF++ LI I R+ ++Y++L+ DV +DD E+ G +F ADL+ Sbjct: 462 IWPKSVTPFELHLITINPKKDEQRELGNQLYSQLNG-RYDVLYDDRQERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL+V+VG K + VE+K RL G ED+ ++++ NY + N Sbjct: 521 GLPLRVVVG-KRAGEGIVEVKQRLNGESEDVHIDDLENYLKSLYEN 565 >gi|146295842|ref|YP_001179613.1| prolyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166980111|sp|A4XHN7|SYP_CALS8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145409418|gb|ABP66422.1| prolyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 572 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P ++E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTMKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ + L +LW ESGR+ +G EM ++ DRN++ GPTHEE T I R+ Sbjct: 61 MDRAGAQEVHMSALMPKELWEESGRWAVFGPEMFKIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ EG SY KM+ + Sbjct: 121 EVTSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDMNEEGLDISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF R GL + A++G +GG SHEF+V + GE ++ +C Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGSNSHEFMVPSSVGEAEIAYC 224 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 13/239 (5%) Query: 199 SGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAA 258 +GP+G LS E + AD K +F + S TD+ I ++ + +A Sbjct: 333 AGPVG--LSIE--IYADNE------VKYLKNFVVGSNKTDYH--IKNVNLSDFKVTKFAD 380 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 ++ + L K RGIEVGHIF GTKY+ + + G+ + MG YG Sbjct: 381 LRNITQDDLCPKCLSQKVTIERGIEVGHIFKLGTKYTEAFNCVYTDEKGEKKLMIMGCYG 440 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R AA+IE HD GIIWP +VAP+++ ++ + D+ +IY L K G + Sbjct: 441 IGINRTAAAIIEQMHDEDGIIWPITVAPYEVIVVPVNIKDEQQSKIAFEIYEDLQKKGVE 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD E+ G +F ADL+G P +V +G K ++D ++E+++R T ++ +E + + Sbjct: 501 VLIDDRDERAGVKFKDADLIGIPFRVTIGRK-IADGRIEVRNRRTKESVEVDIESAVEF 558 >gi|242242546|ref|ZP_04796991.1| prolyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|242233973|gb|EES36285.1| prolyl-tRNA synthetase [Staphylococcus epidermidis W23144] Length = 567 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REFLMKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKYRDEKRPRFGLLRGREFLMKDAYSFHSDEASLDATYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + S + Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVYSNE 226 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 68/166 (40%), Positives = 99/166 (59%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SV PF I LI I + R +++Y +L D+ +DD E+ G +F +DL+ Sbjct: 462 IWPKSVTPFDIHLITINPKKEDQRTLGDQLYQKLMD-SYDILYDDRKERAGVKFNDSDLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G P++V+VG K + VE+K R G+ E++ ++E+ Y F N Sbjct: 521 GLPVRVVVG-KRAEEGIVEVKQRFNGLSEEVQIDELETYLQDLFKN 565 >gi|329724323|gb|EGG60835.1| proline--tRNA ligase [Staphylococcus epidermidis VCU144] Length = 567 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REFLMKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKYRDEKRPRFGLLRGREFLMKDAYSFHSDEASLDATYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + S + Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVYSNE 226 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 99/166 (59%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SV PF I LI I R +++Y +L DV +DD E+ G +F +DL+ Sbjct: 462 IWPKSVTPFDIHLITINPKKDDQRTLGDQLYQKLMD-SYDVLYDDRKERAGVKFNDSDLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G P++V+VG K + VE+K R+ G+ E++ ++E+ Y F N Sbjct: 521 GLPVRVVVG-KRAEEGIVEVKQRINGLSEEVQIDELEYYLQDLFKN 565 >gi|27467857|ref|NP_764494.1| prolyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57866745|ref|YP_188412.1| prolyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|251810694|ref|ZP_04825167.1| prolyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|282876305|ref|ZP_06285172.1| proline--tRNA ligase [Staphylococcus epidermidis SK135] gi|293366773|ref|ZP_06613449.1| proline-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|81175026|sp|Q8CST7|SYP_STAES RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81175027|sp|Q5HPS8|SYP_STAEQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|27315402|gb|AAO04536.1|AE016747_33 proline-tRNA ligase [Staphylococcus epidermidis ATCC 12228] gi|57637403|gb|AAW54191.1| prolyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|251805854|gb|EES58511.1| prolyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|281295330|gb|EFA87857.1| proline--tRNA ligase [Staphylococcus epidermidis SK135] gi|291319074|gb|EFE59444.1| proline-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|329736329|gb|EGG72601.1| proline--tRNA ligase [Staphylococcus epidermidis VCU028] gi|329736632|gb|EGG72898.1| proline--tRNA ligase [Staphylococcus epidermidis VCU045] Length = 567 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 158/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REFLMKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKYRDEKRPRFGLLRGREFLMKDAYSFHSDEASLDATYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + S + Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVYSNE 226 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 99/166 (59%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GI Sbjct: 402 AEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SV PF I LI I R +++Y +L DV +DD E+ G +F +DL+ Sbjct: 462 IWPKSVTPFDIHLITINPKKDDQRTLGDQLYQKLMD-SYDVLYDDRKERAGVKFNDSDLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G P++V+VG K + VE+K R+ G+ E++ ++E+ Y F N Sbjct: 521 GLPVRVVVG-KRAEEGIVEVKQRINGLSEEVQIDELEYYLQELFKN 565 >gi|332978157|gb|EGK14892.1| proline--tRNA ligase [Psychrobacter sp. 1501(2011)] Length = 576 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 123/269 (45%), Positives = 172/269 (63%), Gaps = 12/269 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DA+I S +LM+R G+I + + G+Y WLP+G K L V I+REE Sbjct: 1 MRASQFLFATLKETPSDADIVSSQLMVRAGLIRKLASGLYVWLPMGLKVLQKVEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P Q A+LW ESGR++ YG E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MQNIGAQEVLMPMTQPAELWQESGRFEDYGPELLRFTDRHNRDFVLGPTHEEVITDLARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP TF+QIQ KFRDE+RPRFG+MR+REF MKDAYSF + + +Y +M+ + Sbjct: 121 ELRSYKQLPVTFFQIQGKFRDEIRPRFGIMRAREFTMKDAYSFHVDQASLEITYQQMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL + A++G IGG SHEF VLA +GE D + F S+ +D+ Sbjct: 181 YTRIFQRLGLTFRAVLADTGSIGGSASHEFHVLAGSGE-------DAIAF---SDGSDYA 230 Query: 241 DIISLNSIV--EQWTAPYAATSDVHNEKL 267 + L V ++ AP DV K+ Sbjct: 231 ANVELAEAVCNDERAAPTQDRQDVATPKI 259 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 8/188 (4%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K + RGIEVGHIF G KYS ++ T G DGK + MG YG Sbjct: 389 DIRNVVEGDPSPDGKGTLSIKRGIEVGHIFQLGDKYSKALNCTVMGEDGKPVTLMMGCYG 448 Query: 319 IGAMRVVAAVIESSHDGKGIIWP------DSVAPFKISLINIKAHDQVCRDACEKIYARL 372 IG R++AA IE +HD GIIW DS+APF I+++ +K+ ++ E +Y L Sbjct: 449 IGVSRIIAAAIEQNHDDNGIIWAKTPNVNDSIAPFDIAIVPMKSKEETVMQTAEALYQEL 508 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G +V DD E+ G +FA +L+G P +++V + +++ K E R G ++ +S E Sbjct: 509 KAKGLNVLLDDRNERPGVKFADLELIGIPHRIVVSDRNLAEEKYEYVDRRDGEKQLLSRE 568 Query: 433 EVINYASH 440 EV+ S Sbjct: 569 EVLAKVSQ 576 >gi|254303428|ref|ZP_04970786.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323620|gb|EDK88870.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 567 Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGAEMLRLKDRHERDFVLSPTQEEMITAIIRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYS 224 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 72/158 (45%), Positives = 96/158 (60%), Gaps = 1/158 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE G IF G KYS M+AT+ +GK Y+ MG YGIG R +AA IE ++D G Sbjct: 401 SARGIECGQIFKLGDKYSKAMNATYLDENGKTQYMLMGCYGIGVTRTMAAAIEQNNDENG 460 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP S+AP+ + +I ++V + EKIY L + D DD E+ G +F ADL Sbjct: 461 IIWPVSIAPYIVDVIPANIKNEVQVNLAEKIYNELEEEKIDSMLDDRDEKPGFKFKDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +GFP +V+VG K + VE+K R TG ++S EVI Sbjct: 521 IGFPFKVVVG-KRADEGIVELKIRRTGETLEVSENEVI 557 >gi|312884352|ref|ZP_07744060.1| prolyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367982|gb|EFP95526.1| prolyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 571 Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 115/226 (50%), Positives = 153/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPSGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E +P +Q +LW E+GR + G E+LRL DR+D+ + PT EEV+T + R+ Sbjct: 61 INNAGAVETLMPVVQPFELWEETGRSEKMGAELLRLNDRHDRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMRSREF M DAYSFD+ +G + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRSREFSMMDAYSFDIDKDGLQKSYEAMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y R F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCRAFDRMGLNYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSSE 226 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 103/165 (62%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK+ ++MG YGIG RVVAA IE +HD GI Sbjct: 407 RGIEVGHIFQLGKNYSEKMNCGVLGPDGKNTILEMGCYGIGVTRVVAAAIEQNHDKFGIS 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 PD++APF+++++ + H + + A E +Y L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 LPDAIAPFQVAIVPMNMHKSEEVQQAAENLYRELTDLGVEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P V++G + + + E K+R TG +E +++ +++ + ++ + Sbjct: 527 GIPHTVVIGDRSMKEGNFEYKNRRTGEKEAIAMADILGHLKNQLA 571 >gi|296329234|ref|ZP_06871735.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153590|gb|EFG94407.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 567 Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + IIREE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIRKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIIRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYS 224 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 72/158 (45%), Positives = 95/158 (60%), Gaps = 1/158 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE G IF G KYS M+AT+ GK ++ MG YGIG R +AA IE ++D G Sbjct: 401 SARGIECGQIFKLGDKYSKAMNATYLDEKGKTQFMLMGCYGIGVTRTMAASIEQNNDENG 460 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP S+AP+ + +I ++V EKIY L + DV DD E+ G +F ADL Sbjct: 461 IIWPVSIAPYIVDVIPANIKNEVQVSLAEKIYNELQEEKIDVMLDDRDEKPGFKFKDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +GFP +V+VG K + VE+K R TG ++S EVI Sbjct: 521 IGFPFKVVVG-KRADEGIVELKIRRTGETLEVSQNEVI 557 >gi|148652560|ref|YP_001279653.1| prolyl-tRNA synthetase [Psychrobacter sp. PRwf-1] gi|172048509|sp|A5WDG2|SYP_PSYWF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148571644|gb|ABQ93703.1| prolyl-tRNA synthetase [Psychrobacter sp. PRwf-1] Length = 576 Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 113/224 (50%), Positives = 154/224 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DA+I S +LMLR G+I + + G+Y WLP+G K L V I+REE Sbjct: 1 MRASQFLFATLKETPSDADIVSSQLMLRAGLIRKLASGLYVWLPMGLKVLQKVEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ +P Q A+LW ESGR++ YG E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MQNIGGQEVLMPMTQPAELWQESGRFEDYGPELLRFTDRHNRDFVLGPTHEEVITDLARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP TF+QIQ KFRDE+RPRFG+MR+REF MKDAYSF + + +Y +M+ + Sbjct: 121 ELRSYKQLPVTFFQIQGKFRDEIRPRFGIMRAREFTMKDAYSFHVDQASLEVTYQQMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF RLGL + A++G IGG SHEF VLA +GE + S Sbjct: 181 YTRIFQRLGLNFRAVLADTGSIGGSASHEFHVLAGSGEDAIAFS 224 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 8/187 (4%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D+ P+ K + RGIEVGHIF G KYS ++ T G DGK + MG YG Sbjct: 389 DIRNVVEGDASPDGKGTLSIKRGIEVGHIFQLGDKYSKALNCTVMGEDGKPVTLMMGCYG 448 Query: 319 IGAMRVVAAVIESSHDGKGIIWP------DSVAPFKISLINIKAHDQVCRDACEKIYARL 372 IG R++AA IE +HD GIIW DS+APF I+++ +K+ + E +Y L Sbjct: 449 IGVSRIIAAAIEQNHDDNGIIWAKTPDIKDSIAPFDIAIVPMKSKEDTVMQTAEALYEEL 508 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G +V DD E+ G +FA +L+G P +++V + +++ K E R G ++ +S E Sbjct: 509 KARGLNVILDDRNERPGVKFADLELIGIPHRIVVSDRNLAEDKYEYVDRRDGEKQLLSRE 568 Query: 433 EVINYAS 439 E++ S Sbjct: 569 ELLAKVS 575 >gi|10438145|dbj|BAB15178.1| unnamed protein product [Homo sapiens] Length = 402 Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 140/397 (35%), Positives = 215/397 (54%), Gaps = 36/397 (9%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 ML+ G+I+ S G Y LP +A++ + +I +E G ++++P+L A+LW + R Sbjct: 1 MLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAELWQATNR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPFTFYQIQLKFRDELR 144 +D GKE+LRL DR+ K GPTHEE +T + S K SY+ LPF YQ+ KFRDE R Sbjct: 61 WDLMGKELLRLRDRHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKFRDEPR 120 Query: 145 PRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGG 204 PRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F++LGL + ++A+ G IGG Sbjct: 121 PRFGLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLGLPFVKVQADVGTIGG 180 Query: 205 DLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 +SHEF + D GE ++ C + S N + D+ +N Q P T Sbjct: 181 TVSHEFQLPVDIGEDRLAICPRCSF-----SANMETLDLSQMNCPACQ--GPLTKT---- 229 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 +GIEVGH FY GTKYS +A F GK +MG YG+G R Sbjct: 230 ----------------KGIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGLGVTR 273 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACEKIYARLS----KVGC 377 ++AA IE + WP +AP++ LI K + +Q + ++Y ++ ++ Sbjct: 274 ILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEQAASELIGQLYDHITEAVPQLHG 333 Query: 378 DVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 +V DD IG++ A+ G+P +I G + + D Sbjct: 334 EVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALED 370 >gi|297587908|ref|ZP_06946552.1| proline--tRNA ligase [Finegoldia magna ATCC 53516] gi|297574597|gb|EFH93317.1| proline--tRNA ligase [Finegoldia magna ATCC 53516] Length = 576 Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 114/235 (48%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K+++P L+E+P+DAEIASHKL+LR GMI + + G+YS+LPLG + + V I+REE Sbjct: 1 MRMNKFYMPTLREDPQDAEIASHKLLLRAGMIRKTAAGLYSYLPLGYRIVRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E+ +P Q ++W ESGR+ ++G EM +L DRN++ GPT EE TD+ + Sbjct: 61 MDNYGSQEIHMPVTQPREIWEESGRWKTFGPEMFKLQDRNNREFCLGPTAEEYFTDLVKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFG+ RSREFLM+D+Y+FD+ E + +Y M+ + Sbjct: 121 EIKSYKQLPLNIYQIQTKYRDEKRPRFGINRSREFLMEDSYTFDVDEEAMREAYMNMWRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +F+RLGL+ + +SG +GG+ SHEFI L+D GE V C D DF E Sbjct: 181 YEVVFNRLGLEYKIVAGDSGAMGGNSSHEFIALSDVGEG-VICYSDDSDFAATDE 234 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 70/156 (44%), Positives = 96/156 (61%), Gaps = 5/156 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVG+IF G KYS M+ATF +GK+ + MGSYGIG R V+A++E +HD KG+I Sbjct: 403 RGIEVGNIFQLGQKYSKSMNATFLDENGKEQFFWMGSYGIGVTRSVSAIVEQNHDDKGMI 462 Query: 340 WPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP VAP+ I+++N K +Q EK+Y +L G +V DD E++G +F DL Sbjct: 463 WPLVVAPYHVIITIVNTKNDEQ--NTLAEKLYEKLLLQGVEVLLDDRKERVGVKFNDRDL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G PL++ VG K D VE R T +MS +E Sbjct: 521 IGIPLRITVGKKADEDI-VEFSERKTLENVEMSSQE 555 >gi|116327681|ref|YP_797401.1| prolyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|122284523|sp|Q053M7|SYP_LEPBL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116120425|gb|ABJ78468.1| Prolyl-tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 576 Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 114/225 (50%), Positives = 157/225 (69%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SKY LP +ENP DA +ASH+LM+R G+ + S G+Y +LPLG K L + IIREE Sbjct: 1 MKASKYILPTEKENPSDAVVASHRLMIRAGLARKSSAGLYFYLPLGLKILQKIKQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+TGA+E +P L +D W +SGR+ + GKEM R+ DR+D + GPTHEE + + + Sbjct: 61 MNKTGALEFDLPILTPSDFWEQSGRWTAMGKEMFRIKDRHDLSYALGPTHEESFSFLLKP 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPRFGV+RSREF+MKDAYSF + +Y M + Sbjct: 121 LLKSYKDLPLNVYQIQTKFRDEIRPRFGVIRSREFIMKDAYSFHIDDVSLDETYQSMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFCS 224 Y +IF R GLK+IP++A+SG +GG S EF+V++ G ET + C+ Sbjct: 181 YRKIFDRCGLKTIPVQADSGSMGGSASEEFMVVSPIGEETLLLCN 225 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Query: 229 DFP--IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE-NKRVSA-RGIEV 284 DFP + S DF + ++E+ + +DV + D P N + A +GIEV Sbjct: 352 DFPYVVASNKEDFH---TQGFVLEKEVSGLPEFADVALAREGDLCPNCNAPLKAEKGIEV 408 Query: 285 GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 GHIF G KY+ +GK + MG YGIG R +A VIE +D KGI WP S+ Sbjct: 409 GHIFKLGEKYTKAFGIQVLDQNGKARTLTMGCYGIGVNRTMATVIEQRNDEKGIFWPISI 468 Query: 345 APFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ 403 APF+++L++I K +Q + E+ Y L +VFWDD G + ++L+GFP++ Sbjct: 469 APFEVTLVSITKGEEQYSK--AEEFYNVLKNENLEVFWDDRDVGPGFKLKDSELIGFPIR 526 Query: 404 VIVGSKFVSDSKVEIKHR 421 V +G KF + ++ I +R Sbjct: 527 VTIGKKFFENGEISIYNR 544 >gi|302379784|ref|ZP_07268268.1| proline--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|302312372|gb|EFK94369.1| proline--tRNA ligase [Finegoldia magna ACS-171-V-Col3] Length = 576 Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 115/235 (48%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K+++P L+E+P+DAEIASHKL+LR GMI + + G+YS+LPLG + + V I+REE Sbjct: 1 MRMNKFYMPTLREDPQDAEIASHKLLLRAGMIRKTAAGLYSYLPLGYRIVRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E+ +P Q ++W ESGR+ ++G EM +L DRN++ GPT EE TD+ + Sbjct: 61 MDNYGSQEIHMPITQPREIWEESGRWKTFGPEMFKLKDRNNREFCLGPTAEEYFTDLVKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFG+ RSREFLM+DAY+FD+ E +Y M+ + Sbjct: 121 EIKSYKQLPLNIYQIQTKYRDEKRPRFGINRSREFLMQDAYTFDVDEEAMGEAYMNMWRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +F+RLGL+ + +SG +GG+ SHEFI L+D GE V C D DF E Sbjct: 181 YEVVFNRLGLEYKIVAGDSGAMGGNSSHEFIALSDVGEG-VICYSDDSDFAATDE 234 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 66/154 (42%), Positives = 92/154 (59%), Gaps = 1/154 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVG+IF G KYS M+ATF +GK+ + MGSYGIG R V+A++E +HD KG+I Sbjct: 403 RGIEVGNIFQLGQKYSKSMNATFLDENGKEQFFWMGSYGIGVTRSVSAIVEQNHDDKGMI 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP VAP+ + + + D+ EK+Y +L G +V DD E+ G +F DL+G Sbjct: 463 WPLVVAPYHVIITIVNTKDEEQNTLAEKLYEKLLLQGVEVLLDDRKERAGVKFNDRDLIG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 PL++ VG K ++ VE R T +MS E Sbjct: 523 IPLRITVGKK-AAEEIVEFSERRTLENVEMSSTE 555 >gi|223044242|ref|ZP_03614279.1| prolyl-tRNA synthetase [Staphylococcus capitis SK14] gi|222442392|gb|EEE48500.1| prolyl-tRNA synthetase [Staphylococcus capitis SK14] Length = 567 Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ I+REE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 ELKSYKRLPLTLFQIQSKYRDEKRPRFGLLRGREFIMKDAYSFHADEESLDATYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF R+G+ + P+ A+SG IGG+ +HEF+ L++ GE + S + Sbjct: 181 YSKIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSNE 226 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 68/166 (40%), Positives = 101/166 (60%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GI Sbjct: 402 AEGIEVGQVFKLGTKYSEAMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNNDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SV PF + LI I R+ +++Y +L+ D+ +DD E+ G +F ADL+ Sbjct: 462 IWPKSVTPFDLHLITINPKKDDQRELGDQLYDQLNG-KFDILYDDRKERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G P++V+VG K + VE+K RL+G E++ + ++ NY + N Sbjct: 521 GLPMRVVVG-KRAEEGIVEVKQRLSGESEEIHVNDLENYLKDLYDN 565 >gi|19704979|ref|NP_602474.1| prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|81848323|sp|Q8RIE2|SYP_FUSNN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|19712883|gb|AAL93773.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 567 Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIIRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYS 224 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 72/158 (45%), Positives = 95/158 (60%), Gaps = 1/158 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE G IF G KYS M+AT+ GK ++ MG YGIG R +AA IE ++D G Sbjct: 401 SARGIECGQIFKLGDKYSKAMNATYLDEKGKTQFMLMGCYGIGVTRTMAASIEQNNDENG 460 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP S+AP+ + +I ++V EKIY L + DV DD E+ G +F ADL Sbjct: 461 IIWPVSIAPYIVDVIPANIKNEVQVSLAEKIYNELQEEKIDVMLDDRDEKPGFKFKDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +GFP +V+VG K + VE+K R TG ++S EVI Sbjct: 521 IGFPFKVVVG-KRADEGIVELKIRRTGETLEVSQNEVI 557 >gi|253576294|ref|ZP_04853624.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844187|gb|EES72205.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 571 Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 119/222 (53%), Positives = 151/222 (68%), Gaps = 1/222 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ P L+E P DAE ASH+ +LR G I Q + GIYS+LPLG+K L + I+REE Sbjct: 1 MRQSRLLSPTLREAPSDAEAASHQHLLRAGYIRQLAAGIYSYLPLGRKVLLRIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q A+LW SGRY+ YG E++R DR+D+ GPTHEEV+T + R Sbjct: 61 MNRAGAQELLLPAMQPAELWQRSGRYERYGPELIRFKDRHDREFALGPTHEEVITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP T YQIQ KFRDE RPRFG++R REFLMKDAYSFD G +Y M + Sbjct: 121 EVNSYRQLPLTVYQIQTKFRDERRPRFGLLRGREFLMKDAYSFDTDWTGLDRAYQSMVSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGETQV 221 Y +IF R GLK + A+ G IGG+ +HEF+ LAD GE V Sbjct: 181 YEKIFRRCGLKFRAVEADPGTIGGEGGTHEFMALADIGEDVV 222 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 75/195 (38%), Positives = 108/195 (55%), Gaps = 4/195 (2%) Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 L S+ P A+ D N D+ P E + RGIEVGH+F GT+YS + A Sbjct: 370 LRSVCPTRDVPEASIGDFRNVVNGDACPRCKEGRLQLLRGIEVGHVFKLGTRYSEQLGAV 429 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 F A G + MG YGIG R+++A+ E HD G+IWP S+AP+++ +I I + + Sbjct: 430 FLDAQGHQQPMIMGCYGIGLSRLMSAIAEQHHDEHGLIWPVSIAPYQVHIIPISVTNPLQ 489 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + ++Y +L++ G DV DD E+ GS+F ADL+G P +VI+G K +VE R Sbjct: 490 MELALQLYEKLTQAGIDVLLDDRDERPGSKFHDADLIGIPYRVIIG-KSAEQGQVEWVER 548 Query: 422 LTGIREDMSLEEVIN 436 RE +SLEE I Sbjct: 549 NIMKRELISLEEAIQ 563 >gi|114566427|ref|YP_753581.1| prolyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318501|sp|Q0AYJ4|SYP_SYNWW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114337362|gb|ABI68210.1| prolyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 570 Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 160/226 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F P L+E P +AE+ SH+L+LR G I + + G+YS+LPL + L + I+REE Sbjct: 1 MKASELFFPTLREVPSEAEVLSHQLLLRAGFIRKATAGVYSYLPLANRVLKKIMNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q A+LW +SGR++ YG EM RL DR+++ GPTHEE++T + + Sbjct: 61 MDRAGGQEVILPIIQPAELWKKSGRWEVYGDEMFRLKDRHNRDFALGPTHEEIITTLVDA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP YQIQ K+RDE+RPRFG+MR REF+MKD YSFD+ EG SY+KM+ + Sbjct: 121 DVHSYRHLPLLLYQIQNKYRDEIRPRFGLMRGREFIMKDLYSFDIDEEGLDISYHKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RL L+ + A+SG IGG+ SHEF+VLA+ GE ++ K+ Sbjct: 181 YNRIFQRLKLQYRVVEADSGAIGGNESHEFMVLAENGEAEIVYCKN 226 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/167 (35%), Positives = 93/167 (55%), Gaps = 2/167 (1%) Query: 257 AATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N DS P S RGIEVGHIF GTKYS + A + G++ + M Sbjct: 378 AGINDIRNAVAGDSCPVCSAPLYSMRGIEVGHIFKLGTKYSEVLEANYLDQKGQEKPMVM 437 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R +AA +E S D GI+WP + PF++ ++ + + ++ A +Y + Sbjct: 438 GCYGIGISRTMAAAVEQSADENGIVWPLPITPFEVIIVPVNSKNEEQMQAAWSLYEEFKQ 497 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G + DD E+ G +F ADL+G PL++ +G + + + +VE+K R Sbjct: 498 EGLETIVDDRDERAGVKFKDADLIGIPLRITIGPRSLQEKQVEVKKR 544 >gi|297545340|ref|YP_003677642.1| prolyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843115|gb|ADH61631.1| prolyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 570 Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 156/224 (69%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V IIREE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+ KM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDVDWEGLDKSFEKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF R GLK + + A+SG +GG S EF+V++ GE + +C Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISSVGEAVIAYC 224 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 71/156 (45%), Positives = 96/156 (61%), Gaps = 1/156 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + A + +G + + MG YGIG R VAA+IE +HD KGII Sbjct: 405 RGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIVMGCYGIGINRTVAAIIEQNHDDKGII 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP SVAP+ + ++ + ++ E IYA L K G +V DD + G +F ADLLG Sbjct: 465 WPMSVAPYHVIIVPVNVSNEAQNGVAEDIYAALQKEGIEVLIDDRDLRAGVKFNDADLLG 524 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 P+++ VG K VSD VEIK R E++ + +V+ Sbjct: 525 IPIRITVGKK-VSDGIVEIKLRENEEAEEVKISDVV 559 >gi|302876555|ref|YP_003845188.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|307687227|ref|ZP_07629673.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|302579412|gb|ADL53424.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B] Length = 566 Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 119/225 (52%), Positives = 155/225 (68%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + ++E P +AEI+SH+LMLR G++ + + G+Y+++P+G KAL V IIR+E Sbjct: 1 MKLSKALMLTMREVPAEAEISSHQLMLRAGLMRKMASGVYNYMPMGLKALKKVEDIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E L A+LW ESGR+D+ G EM RL DRND+ GPTHEEV TDI R+ Sbjct: 61 MDKAGAQEFLASALIPAELWKESGRWDTMGPEMFRLKDRNDRDFCLGPTHEEVFTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD EG SYN M+ + Sbjct: 121 EIKSYKQLPITLYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDKDSEGLDISYNAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 Y IF R ++ A+SG +GG S EF+V ++ GE VFCS Sbjct: 181 YKNIFFRCDIECKAAEADSGAMGGSGSAEFMVKSEVGEDDIVFCS 225 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/164 (43%), Positives = 98/164 (59%), Gaps = 1/164 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGHIF GTKYS M+A F DG MG YGIG R +AAVIE +D GI Sbjct: 401 ARGIEVGHIFKLGTKYSESMNAVFTDQDGTQKPFIMGCYGIGVNRTLAAVIEQHNDENGI 460 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP VAP+++ ++ D+V E++Y L +G DV DD E+ G +F ADLL Sbjct: 461 IWPLEVAPYQVIVVPAVFKDEVQMKKAEELYDALKAIGVDVILDDRNERAGIKFKDADLL 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P+++ VG K +++ +VE K R + E ++ ++VI+ F Sbjct: 521 GIPMRITVGKK-IAEGEVEFKLRSSADLEVIAYDKVIDRVKEEF 563 >gi|116330596|ref|YP_800314.1| prolyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281649|sp|Q04U64|SYP_LEPBJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116124285|gb|ABJ75556.1| Prolyl-tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 576 Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 114/225 (50%), Positives = 157/225 (69%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SKY LP +ENP DA +ASH+LM+R G+ + S G+Y +LPLG K L + IIREE Sbjct: 1 MKASKYILPTEKENPSDAVVASHRLMIRAGLARKSSAGLYFYLPLGLKILQKIKQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+TGA+E +P L +D W +SGR+ + GKEM R+ DR+D + GPTHEE + + + Sbjct: 61 MNKTGALEFDLPILTPSDFWEQSGRWTAMGKEMFRIKDRHDLSYALGPTHEESFSFLLKP 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPRFGV+RSREF+MKDAYSF + +Y M + Sbjct: 121 LLKSYKDLPLNVYQIQTKFRDEIRPRFGVIRSREFIMKDAYSFHIDDVSLDETYQSMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFCS 224 Y +IF R GLK+IP++A+SG +GG S EF+V++ G ET + C+ Sbjct: 181 YRKIFDRCGLKTIPVQADSGSMGGSASEEFMVVSPIGEETLLLCN 225 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Query: 229 DFP--IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE-NKRVSA-RGIEV 284 DFP + S DF + ++E+ + +DV + D P N + A +GIEV Sbjct: 352 DFPYVVASNKEDFH---TQGFVLEKEVSGLPEFADVALAREGDLCPNCNAPLKAEKGIEV 408 Query: 285 GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 GHIF G KY+ +GK + MG YGIG R +A VIE +D KGI WP S+ Sbjct: 409 GHIFKLGEKYTKAFGIQVLDQNGKARTLTMGCYGIGVNRTMATVIEQRNDEKGIFWPISI 468 Query: 345 APFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ 403 APF+++L++I K +Q + E+ Y L +VFWDD G + ++L+GFP++ Sbjct: 469 APFEVTLVSITKGEEQYSK--AEEFYNVLKNENLEVFWDDRDVGPGFKLKDSELIGFPIR 526 Query: 404 VIVGSKFVSDSKVEIKHR 421 V +G KF + ++ I +R Sbjct: 527 VTIGKKFFENGEISIYNR 544 >gi|254521784|ref|ZP_05133839.1| prolyl-tRNA synthetase [Stenotrophomonas sp. SKA14] gi|219719375|gb|EED37900.1| prolyl-tRNA synthetase [Stenotrophomonas sp. SKA14] Length = 567 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 151/224 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V I+REE Sbjct: 1 MRLSQFHLHTTKETPSDAELTSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E +PT+Q +LW ++GR+ +G ++L++ DR D+ Y PT EE D RS Sbjct: 61 MDRAGAVEFQIPTIQPKELWEQTGRWQKFGPQLLKIKDRKDQVFCYSPTAEEAACDFARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQ+Q KFRDE+RPRFGVMRSREFLMKDAYSF L E Y M + Sbjct: 121 ELSSYKQLPVNFYQVQTKFRDEIRPRFGVMRSREFLMKDAYSFHLHDECLVREYENMKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + S Sbjct: 181 YSRIFTRLGLDFRMVQADSGAIGGDASQEFHVIADSGEDALVFS 224 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 4/166 (2%) Query: 259 TSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N + D +L + ARGIEVGH+F G Y+ + AT +GK + MG Y Sbjct: 384 VADIRNVRAGDRALDGGELKIARGIEVGHVFQLGRTYAKALDATVLDENGKAAVMAMGCY 443 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKV 375 GIG RVVAA IE +HD GIIWPD++AP++ + +IN K V DA + L Sbjct: 444 GIGISRVVAAAIEQNHDDAGIIWPDAMAPWQVVVCVINPKGDAAV-ADAAASLLQELRDA 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G D DD G + G+ FA +L+G P +V+V + ++ E + R Sbjct: 503 GLDAALDDRGLRPGAMFADMELIGIPHRVVVSERGLAAGTYEYRSR 548 >gi|241895744|ref|ZP_04783040.1| prolyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] gi|241870787|gb|EER74538.1| prolyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] Length = 570 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 153/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE+ SH++MLR G + Q + G+Y++LPL Q+ L+ +NAIIREE Sbjct: 1 MKQSKVFIPTLRETPADAEVISHQMMLRAGYVRQVTAGVYAYLPLAQRVLNKINAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + AIEM+ P L A+LW ESGRY++YG + +L +R+ + MI GPTHEE MT + R Sbjct: 61 MEKIDAIEMTAPVLLPAELWEESGRYETYGPNLFKLKNRHGRDMILGPTHEETMTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ K RDE RPRFGV+R REF+MKDAYSF + G +Y KM + Sbjct: 121 DIKSYKRLPLTLYQIQTKLRDEDRPRFGVLRGREFIMKDAYSFSIDEAGLDDAYKKMETA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y+ IF R+GL + ++G +GG S EF A GE + S + Sbjct: 181 YVNIFDRVGLNYRVIVGDAGAMGGSDSKEFSAPAAAGEDTIAYSDE 226 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/142 (43%), Positives = 86/142 (60%), Gaps = 1/142 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF GT+YS M A A+G+ V MGSYGIG R++AA+ E + D G+ Sbjct: 404 KGIEVGHIFKLGTRYSKSMGAQVLDANGRQADVIMGSYGIGVSRLLAAIAEQNADEHGLS 463 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP +VAP+ + L+ IK D+ + + L G +V DD E+ G +FA +DL+G Sbjct: 464 WPAAVAPWDVHLVPIKYKDETQAKLTDDLNESLVAAGYEVLVDDRNERPGVKFADSDLIG 523 Query: 400 FPLQVIVGSKFVSDSKVEIKHR 421 P++V VG K SD VE+K R Sbjct: 524 LPVRVTVGKK-ASDGIVEVKLR 544 >gi|126697615|ref|YP_001086512.1| prolyl-tRNA synthetase [Clostridium difficile 630] gi|255099207|ref|ZP_05328184.1| prolyl-tRNA synthetase [Clostridium difficile QCD-63q42] gi|255304990|ref|ZP_05349162.1| prolyl-tRNA synthetase [Clostridium difficile ATCC 43255] gi|123174666|sp|Q18CD2|SYP1_CLOD6 RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|115249052|emb|CAJ66863.1| Prolyl-tRNA synthetase [Clostridium difficile] Length = 571 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 114/225 (50%), Positives = 154/225 (68%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F+P L+E P DAEI SH+LM+R+GMI + + G+Y+ LP+G + + IIREE Sbjct: 1 MKMSKMFMPTLKEIPADAEITSHQLMVRSGMIKKMTSGVYNQLPMGLRVFKKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ E+ L ++LW ESGR+ + G+EM RL DR ++ GPTHEE TDI R Sbjct: 61 LNKKDCQEILCAALLPSELWKESGRWTAMGEEMFRLKDRTEREYCLGPTHEEAFTDIIRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ+K+RDE RPRFGVMR++ F MKDAYSFD+ +G SY MF + Sbjct: 121 EITSYKQLPLNLYQIQVKYRDERRPRFGVMRTKTFTMKDAYSFDVDDKGLDKSYQDMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 Y+ IF R GL++ P++A+SG IGG S EF+V ++ GE + VFCS Sbjct: 181 YVSIFDRCGLENSPVQADSGAIGGSTSAEFMVKSEVGEDEVVFCS 225 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 68/145 (46%), Positives = 93/145 (64%), Gaps = 5/145 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARG+EVGHIF GTKYS M+A F DGK + MG YGIG R AA+IE +D KGI Sbjct: 401 ARGVEVGHIFKLGTKYSESMNANFIDKDGKSKPIVMGCYGIGVERTAAAIIEQHNDEKGI 460 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP SVAP+ + ++ N+K +Q+ E IY L +G +V DD E+IG +F ++ Sbjct: 461 IWPLSVAPYHVVIVPANMKNEEQI--SIAENIYNDLQAMGVEVLLDDRDERIGVKFNDSE 518 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L+G P+++ VG K +++ KVE K R Sbjct: 519 LIGIPMRITVG-KNINEGKVEFKLR 542 >gi|255654136|ref|ZP_05399545.1| prolyl-tRNA synthetase [Clostridium difficile QCD-23m63] gi|296449825|ref|ZP_06891592.1| proline--tRNA ligase [Clostridium difficile NAP08] gi|296877889|ref|ZP_06901909.1| proline--tRNA ligase [Clostridium difficile NAP07] gi|296261312|gb|EFH08140.1| proline--tRNA ligase [Clostridium difficile NAP08] gi|296431086|gb|EFH16913.1| proline--tRNA ligase [Clostridium difficile NAP07] Length = 571 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 114/225 (50%), Positives = 154/225 (68%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F+P L+E P DAEI SH+LM+R+GMI + + G+Y+ LP+G + + IIREE Sbjct: 1 MKMSKMFMPTLKEVPADAEITSHQLMVRSGMIKKMTSGVYNQLPMGLRVFKKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ E+ L ++LW ESGR+ + G+EM RL DR ++ GPTHEE TDI R Sbjct: 61 LNKKDCQEILCAALLPSELWKESGRWTAMGEEMFRLKDRTEREYCLGPTHEEAFTDIIRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ+K+RDE RPRFGVMR++ F MKDAYSFD+ +G SY MF + Sbjct: 121 EITSYKQLPLNLYQIQVKYRDERRPRFGVMRTKTFTMKDAYSFDVDDKGLDKSYQDMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 Y+ IF R GL++ P++A+SG IGG S EF+V ++ GE + VFCS Sbjct: 181 YVSIFDRCGLENSPVQADSGAIGGSTSTEFMVKSEVGEDEVVFCS 225 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/145 (47%), Positives = 94/145 (64%), Gaps = 5/145 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARG+EVGHIF GTKYS M+A F DGK + MG YGIG R AA+IE +D KGI Sbjct: 401 ARGVEVGHIFKLGTKYSESMNANFIDRDGKSKPIVMGCYGIGVERTAAAIIEQHNDEKGI 460 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP SVAP+ + ++ N+K +Q+ EKIY L +G +V DD E+IG +F ++ Sbjct: 461 IWPLSVAPYHVVIVPANMKNEEQI--SIAEKIYNDLQAMGVEVLLDDRDERIGVKFNDSE 518 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L+G P+++ VG K +++ KVE K R Sbjct: 519 LIGIPMRITVG-KNINEGKVEFKFR 542 >gi|190572717|ref|YP_001970562.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] gi|226701342|sp|B2FMR5|SYP_STRMK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|190010639|emb|CAQ44248.1| putative prolyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] Length = 567 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 151/224 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V I+REE Sbjct: 1 MRLSQFHLHTTKETPSDAELTSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E +PT+Q +LW ++GR+ +G ++L++ DR D+ Y PT EE D RS Sbjct: 61 MDRAGAVEFQIPTIQPKELWEQTGRWQKFGPQLLKIKDRKDQVFCYSPTAEEAACDFARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQ+Q KFRDE+RPRFGVMRSREFLMKDAYSF L E Y M + Sbjct: 121 ELSSYKQLPVNFYQVQTKFRDEIRPRFGVMRSREFLMKDAYSFHLHDECLVREYENMKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + S Sbjct: 181 YSRIFTRLGLDFRMVQADSGAIGGDASQEFHVIADSGEDALVFS 224 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 4/170 (2%) Query: 255 PYAATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 P +D+ N + D +L + ARGIEVGH+F G KY+ + AT +GK + Sbjct: 380 PEPEVADIRNVRAGDRALDGGELKIARGIEVGHVFQLGRKYAEALDATVLDENGKAAVMA 439 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYAR 371 MG YGIG RVVAA IE +HD GIIWPD++AP++ + +IN K V DA + Sbjct: 440 MGCYGIGISRVVAAAIEQNHDDAGIIWPDAMAPWQVVVCVINPKGDAAV-ADAAASLLQE 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G D DD G + G+ FA +L+G P +V+V + + E + R Sbjct: 499 LRDAGLDAALDDRGLRPGAMFADMELIGIPHRVVVSERGLGAGTYEYRSR 548 >gi|254973700|ref|ZP_05270172.1| prolyl-tRNA synthetase [Clostridium difficile QCD-66c26] gi|255091090|ref|ZP_05320568.1| prolyl-tRNA synthetase [Clostridium difficile CIP 107932] gi|255312745|ref|ZP_05354328.1| prolyl-tRNA synthetase [Clostridium difficile QCD-76w55] gi|255515506|ref|ZP_05383182.1| prolyl-tRNA synthetase [Clostridium difficile QCD-97b34] gi|255648598|ref|ZP_05395500.1| prolyl-tRNA synthetase [Clostridium difficile QCD-37x79] gi|260681818|ref|YP_003213103.1| prolyl-tRNA synthetase [Clostridium difficile CD196] gi|260685415|ref|YP_003216548.1| prolyl-tRNA synthetase [Clostridium difficile R20291] gi|306518722|ref|ZP_07405069.1| prolyl-tRNA synthetase [Clostridium difficile QCD-32g58] gi|260207981|emb|CBA60132.1| prolyl-tRNA synthetase [Clostridium difficile CD196] gi|260211431|emb|CBE01529.1| prolyl-tRNA synthetase [Clostridium difficile R20291] Length = 571 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 114/225 (50%), Positives = 154/225 (68%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F+P L+E P DAEI SH+LM+R+GMI + + G+Y+ LP+G + + IIREE Sbjct: 1 MKMSKMFMPTLKEIPADAEITSHQLMVRSGMIKKMTSGVYNQLPMGLRVFKKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ E+ L ++LW ESGR+ + G+EM RL DR ++ GPTHEE TDI R Sbjct: 61 LNKKDCQEILCAALLPSELWKESGRWTAMGEEMFRLKDRTEREYCLGPTHEEAFTDIIRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ+K+RDE RPRFGVMR++ F MKDAYSFD+ +G SY MF + Sbjct: 121 EITSYKQLPLNLYQIQVKYRDERRPRFGVMRTKTFTMKDAYSFDVDDKGLDKSYQDMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 Y+ IF R GL++ P++A+SG IGG S EF+V ++ GE + VFCS Sbjct: 181 YVSIFDRCGLENSPVQADSGAIGGSTSAEFMVKSEVGEDEVVFCS 225 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 68/145 (46%), Positives = 93/145 (64%), Gaps = 5/145 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARG+EVGHIF GTKYS M+A F DGK + MG YGIG R AA+IE +D KGI Sbjct: 401 ARGVEVGHIFKLGTKYSESMNANFIDKDGKSKPIVMGCYGIGVERTAAAIIEQHNDEKGI 460 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP SVAP+ + ++ N+K +Q+ E IY L +G +V DD E+IG +F ++ Sbjct: 461 IWPLSVAPYHVVIVPANMKNEEQI--SIAENIYNDLQAMGVEVLLDDRDERIGVKFNDSE 518 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L+G P+++ VG K +++ KVE K R Sbjct: 519 LIGIPMRITVG-KNINEGKVEFKLR 542 >gi|289579170|ref|YP_003477797.1| prolyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] gi|289528883|gb|ADD03235.1| prolyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] Length = 570 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 156/224 (69%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V I+REE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+ KM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDVDWEGLDKSFEKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF R GLK + + A+SG +GG S EF+V++ GE + +C Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISSVGEAVIAYC 224 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 70/156 (44%), Positives = 95/156 (60%), Gaps = 1/156 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + A + +G + + MG YGIG R VAA+IE +HD KGII Sbjct: 405 RGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIVMGCYGIGINRTVAAIIEQNHDDKGII 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP SVAP+ + ++ + ++ E IYA L K G +V DD + G +F ADLLG Sbjct: 465 WPMSVAPYHVIIVPVNVSNEAQNGVAEDIYAALQKEGIEVLIDDRDLRAGVKFNDADLLG 524 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 P+++ VG K V D VEIK R E++ + +V+ Sbjct: 525 IPIRITVGKK-VGDGIVEIKLRENEEAEEVKISDVV 559 >gi|260495035|ref|ZP_05815164.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_33] gi|260197478|gb|EEW94996.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_33] Length = 567 Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERGFVLSPTQEEMITAIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDKEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYS 224 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 72/159 (45%), Positives = 98/159 (61%), Gaps = 1/159 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE G IF G KYS M+AT+ G+ HY+ MG YGIG R +AA IE +D G Sbjct: 401 SARGIECGQIFKLGDKYSKAMNATYLDEKGQSHYMLMGCYGIGVTRTMAAAIEQYNDENG 460 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP S+AP+ + +I + ++ + EKIY L + DV DD E+ G +F ADL Sbjct: 461 IIWPVSIAPYIVDVIPVNIKNEAQVNLAEKIYNNLQEEKIDVMLDDRDEKPGFKFKDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +GFP +V+VG K + +VE+K R TG ++S E+IN Sbjct: 521 IGFPFKVVVGKK-AEEGRVELKIRKTGETFEISQNEIIN 558 >gi|312623109|ref|YP_004024722.1| prolyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312203576|gb|ADQ46903.1| prolyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 572 Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDKSGAQEVHMSALMPKELWEESGRWAVFGPEMFRVKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ +G SY KM+ + Sbjct: 121 EISSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDVDEKGLDISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y+RIF R GL + A++G +GG SHEF+V + GE ++ +C Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYC 224 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 122/237 (51%), Gaps = 13/237 (5%) Query: 199 SGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAA 258 +GPIG ++ V AD K +F + + TD+ I ++ + +A Sbjct: 333 AGPIGLSIN----VYADNE------VKYLKNFVVGANKTDYH--IKNVNLSDFKVTKFAD 380 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 ++ + L K RGIEVGHIF GTKY+ + + G+ + MG YG Sbjct: 381 LRNITQDDLCPKCCSQKVTIERGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLMIMGCYG 440 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R AA+IE HD GIIWP +VAP+++ ++ + D+ +IY L + G + Sbjct: 441 IGINRTAAAIIEQMHDEDGIIWPITVAPYEVIIVPVNVKDENQNRIAFEIYENLQRNGVE 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 V DD E+ G +F ADL+G P +V VG K +S+ K+EI++R T ++ +E+ I Sbjct: 501 VLIDDRDERAGVKFKDADLIGIPFRVTVGKK-ISEGKLEIRNRRTKESFEVEIEKAI 556 >gi|70726652|ref|YP_253566.1| prolyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|114152257|sp|Q4L5W5|SYP_STAHJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|68447376|dbj|BAE04960.1| proline-tRNA ligase [Staphylococcus haemolyticus JCSC1435] Length = 566 Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 111/225 (49%), Positives = 158/225 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++ P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTRRDVPAEAEALSHQLLLKAGLIKQSTSGIYSYLPLASRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T I R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDETYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF R+G+ + P+ A+SG IGG+ +HEF+ L++ GE + S+ Sbjct: 181 YDRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSE 225 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 100/166 (60%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GI Sbjct: 402 AEGIEVGQVFKLGTKYSEAMNATFLDNQGKAKPLIMGCYGIGVSRTLSAIVEQNNDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SV PF + LI I + +++Y L + DV +DD ++ G +F ADL+ Sbjct: 462 IWPKSVTPFDLHLITINPKKDEQLELGDQLYKELQQ-QYDVLYDDRKDRAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G P++++VG K S+ VE+K R TG E++ + ++ + + +SN Sbjct: 521 GLPIRIVVG-KNASEGIVEVKVRQTGESEEVHINDLNTHIATLYSN 565 >gi|193661987|ref|XP_001946406.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Acyrthosiphon pisum] Length = 433 Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 149/427 (34%), Positives = 222/427 (51%), Gaps = 34/427 (7%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 S KLML G+I Q + G+Y LPL Q++LD + II + GA ++S+P L ++LW Sbjct: 29 SQKLMLELGIIRQSANGLYHLLPLAQRSLDKLIFIINKNMMDIGAQKISMPVLIHSNLWK 88 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 ++GR + +++ + DR K + PTHEEV+TD+F S K+Y+ LP YQ+ KFRD Sbjct: 89 KTGRLNKNIEDLYLVNDRKSKEFLLSPTHEEVVTDLFSSDPKTYKQLPLMLYQVGTKFRD 148 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 E+RP+ G++RS+EFLMKD YSFD + +YNK+ +Y +IF +G+K I + SG Sbjct: 149 EIRPKLGIIRSKEFLMKDLYSFDRDQTSATFTYNKVCQAYEKIFKHIGVKFIRVEGASGM 208 Query: 202 IGGDLSHEFIVLADTG-ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS 260 +GG+ SHEF A+ G +T + C K F + E + E P +++ Sbjct: 209 MGGNQSHEFHYPAEVGDDTLLQCKK--CGFGMNKEMSP-----------ESVQCPKCSST 255 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 D+ K IEVGH F+ GT YS +SAT+ DG M SYG+G Sbjct: 256 DIEFTK--------------AIEVGHTFHLGTFYSSALSATYSDTDGTMKPPYMCSYGLG 301 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA---HDQVCRDACEKIYARLSKV-G 376 R++ A +E I WP S++PF I +I K + + +Y +++ G Sbjct: 302 VSRIIGASVECLSTQDVIQWPRSISPFTICIIPAKEGSIEENASLNNVHSLYNHFTEIFG 361 Query: 377 CDVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKF-VSDSKVEIKHRLTGIREDMSLEEV 434 D+ DD IG + A LGFP V++G K + S E+ T E L + Sbjct: 362 DDIIVDDRTHMTIGKRLIEAKKLGFPFVVVMGKKMNETPSLYELYEANTNKSEHYELSNL 421 Query: 435 INYASHR 441 INY + Sbjct: 422 INYLKQQ 428 >gi|237742688|ref|ZP_04573169.1| prolyl-tRNA synthetase [Fusobacterium sp. 4_1_13] gi|229430336|gb|EEO40548.1| prolyl-tRNA synthetase [Fusobacterium sp. 4_1_13] Length = 567 Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YSRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYS 224 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 71/158 (44%), Positives = 95/158 (60%), Gaps = 1/158 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE G IF G KYS M+AT+ +GK Y+ MG YGIG R +AA IE ++D G Sbjct: 401 SARGIECGQIFKLGDKYSKVMNATYLDENGKTQYMLMGCYGIGVTRTMAAAIEQNNDENG 460 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP S+AP+ + +I ++V EKIY L + D DD E+ G +F ADL Sbjct: 461 IIWPVSIAPYTVDVIPANIKNEVQVSLAEKIYNELEEEKIDAMLDDRDEKPGFKFKDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +GFP +++VG K + VE+K R TG ++S EVI Sbjct: 521 IGFPFKIVVG-KRADEGIVELKIRRTGETLEISQNEVI 557 >gi|257453020|ref|ZP_05618319.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|257467420|ref|ZP_05631731.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 593 Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 158/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEI SH+L+LR GMI + + G+Y++LPLG + L V IIREE Sbjct: 25 MRFSKAYIKTLKETPKEAEIISHQLLLRAGMIKKLASGLYTYLPLGFRTLKKVENIIREE 84 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ +P LQ A+LW ESGR++ G+EM+RL DR+ + + GPT+EEV+TDI R+ Sbjct: 85 MDRAGSQELLMPVLQPAELWQESGRWNVMGEEMVRLKDRHQRDFVLGPTNEEVITDIVRN 144 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ K RDE RPRFG+MRSREF+MKDAYSF + E + M + Sbjct: 145 DISSYKSLPINLYHIQTKVRDERRPRFGLMRSREFIMKDAYSFHTSQESLDEEFENMKNT 204 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 205 YTRIFERCGLKFRPVEADSGAIGGSGSQEFHVLAESGEDEIIYS 248 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 5/161 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE GHIF G KYS + A++ G+ + MG YGIG R +AA IE ++D G Sbjct: 427 SARGIECGHIFKLGDKYSKALGASYLDEKGESKIMLMGCYGIGVGRTMAAAIEQNYDEHG 486 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP+ + +I NIK +Q+ EKIY +L+ D DD E+ G +F A Sbjct: 487 IIWPSALAPYLVDVIPANIKNAEQM--QLAEKIYEQLNAEHLDAMLDDRDERPGFKFKDA 544 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DL+GFP +VI G K +++ VE+K R TG ++ ++E+I+ Sbjct: 545 DLIGFPFKVICGKK-AAENIVELKIRKTGETFEIPVDEIIS 584 >gi|315645695|ref|ZP_07898819.1| prolyl-tRNA synthetase [Paenibacillus vortex V453] gi|315279173|gb|EFU42483.1| prolyl-tRNA synthetase [Paenibacillus vortex V453] Length = 576 Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 124/265 (46%), Positives = 166/265 (62%), Gaps = 10/265 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ + +++ P +AE SH+ MLR G I Q + GIYS+LPLG + L + IIR+E Sbjct: 1 MRQSQLLMTTMRDMPSEAEALSHQWMLRGGYIRQTAAGIYSYLPLGWRVLRKIEGIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA EM +P +Q A+LW ESGRYD YG E++RL DR+D+ + GPTHEEV+T I R Sbjct: 61 MDAAGAQEMLMPAVQPAELWKESGRYDVYGPELIRLHDRHDREFVLGPTHEEVITSIVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ K+RDE RPRFG++R REFLMKDAYSFD EG SY M+ + Sbjct: 121 EISSYRKLPVNLYQIQSKYRDERRPRFGLLRGREFLMKDAYSFDRDWEGLDVSYRSMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGETQVFCSKDF--------MDFP 231 Y RIF R GL + A++G IGG +HEF+ LAD GE V +D + Sbjct: 181 YERIFERCGLTFRAVEADAGAIGGQGETHEFMALADIGEDTVVSCRDCRYAANLERAESV 240 Query: 232 IPSENTDFDDI-ISLNSIVEQWTAP 255 +P+ D + + +S +E+ P Sbjct: 241 VPARQGSVDSVKVDGDSAIERVVTP 265 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 2/168 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GH+F GTKYS M+ + +DG++ + MG YGIG RV+AA+ E G+ ++ Sbjct: 409 RGIELGHVFKLGTKYSEVMNGMYLDSDGREKPLIMGCYGIGVSRVMAAIAEQRISGERLV 468 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL- 398 WP SVAPF++ +I + D+ + E IY L K G + DD E+ G +F A+ Sbjct: 469 WPMSVAPFQVHVIPVAVKDEAQMNLAEHIYKELIKAGLEPLLDDRDERAGVKFKDAESRH 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 G P ++I+G + + +VE G++ ++ I A + R Sbjct: 529 GAPQRLIIG-RGAASGEVEWDRVEDGVKVNLPAAAAIQRACEAAARVR 575 >gi|315918544|ref|ZP_07914784.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|317059560|ref|ZP_07924045.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313685236|gb|EFS22071.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313692419|gb|EFS29254.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 569 Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 158/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEI SH+L+LR GMI + + G+Y++LPLG + L V IIREE Sbjct: 1 MRFSKAYIKTLKETPKEAEIISHQLLLRAGMIKKLASGLYTYLPLGFRTLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ +P LQ A+LW ESGR++ G+EM+RL DR+ + + GPT+EEV+TDI R+ Sbjct: 61 MDRAGSQELLMPVLQPAELWQESGRWNVMGEEMVRLKDRHQRDFVLGPTNEEVITDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ K RDE RPRFG+MRSREF+MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKVRDERRPRFGLMRSREFIMKDAYSFHTSQESLDEEFENMKNT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YTRIFERCGLKFRPVEADSGAIGGSGSQEFHVLAESGEDEIIYS 224 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 5/161 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE GHIF G KYS + A++ G+ + MG YGIG R +AA IE ++D G Sbjct: 403 SARGIECGHIFKLGDKYSKALGASYLDEKGESKIMLMGCYGIGVGRTMAAAIEQNYDEHG 462 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP+ + +I NIK +Q+ EKIY +L+ D DD E+ G +F A Sbjct: 463 IIWPSALAPYLVDVIPANIKNAEQM--QLAEKIYEQLNAEHLDAMLDDRDERPGFKFKDA 520 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DL+GFP +VI G K +++ VE+K R TG ++ ++E+I+ Sbjct: 521 DLIGFPFKVICGKK-AAENIVELKIRKTGETFEIPVDEIIS 560 >gi|237743345|ref|ZP_04573826.1| prolyl-tRNA synthetase [Fusobacterium sp. 7_1] gi|229433124|gb|EEO43336.1| prolyl-tRNA synthetase [Fusobacterium sp. 7_1] Length = 567 Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYS 224 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 72/159 (45%), Positives = 97/159 (61%), Gaps = 1/159 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE G IF G KYS M+AT+ G+ HY+ MG YGIG R +AA IE +D G Sbjct: 401 SARGIECGQIFKLGDKYSKAMNATYLDEKGQSHYMLMGCYGIGVTRTMAAAIEQYNDENG 460 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP S+AP+ + +I + ++ + EKIY L + DV DD E+ G +F ADL Sbjct: 461 IIWPVSIAPYIVDVIPVNIKNEAQVNLAEKIYNNLQEEKIDVMLDDRDEKPGFKFKDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +GFP +V+VG K + VE+K R TG ++S E+IN Sbjct: 521 IGFPFKVVVGKK-AEEGIVELKIRKTGETFEISQNEIIN 558 >gi|309389227|gb|ADO77107.1| prolyl-tRNA synthetase [Halanaerobium praevalens DSM 2228] Length = 568 Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 107/225 (47%), Positives = 159/225 (70%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK +LP L+E+P +A++ SH+LMLR GM+ +H+ GIYS+LPLG K + + I R+ Sbjct: 1 MRMSKLYLPTLKEDPAEADVISHQLMLRAGMMRKHASGIYSYLPLGYKVIKKIEKIARKH 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + A E+ +P +Q + +W +S R+D +G M++ DR ++ GPTHEEV+TD+ R Sbjct: 61 MDNSEAQEVLLPIMQDSQIWKDSKRWDKFGPLMIKFNDRKNREFCLGPTHEEVVTDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY++LP YQIQ K RDE+RPRFGVMR REF+MKDAYS D+ G SY M+ + Sbjct: 121 EVRSYKDLPLNLYQIQTKVRDEIRPRFGVMRGREFIMKDAYSLDIDSAGLDKSYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCS 224 Y +IF GL+++ + A++G +GG SHEF+VLAD+GE ++ FC+ Sbjct: 181 YEKIFAECGLEAVSVEADTGAMGGKDSHEFMVLADSGEDEIAFCN 225 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/154 (40%), Positives = 95/154 (61%), Gaps = 1/154 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVGHIF GTKYS M A + +GK + MGSYGIG R+VAA IE ++D GI W Sbjct: 404 GIEVGHIFKLGTKYSENMDANYLDENGKAQPIVMGSYGIGITRLVAAAIEQNNDQYGIKW 463 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P ++AP++I ++ + D+V + E IY L G +V DD E+ G +F ++L+G Sbjct: 464 PKAIAPYQIIILPLGNDDEV-QTKSEAIYQDLKAKGWEVLIDDRKERAGVKFNDSELIGI 522 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 PL++ +GS+ + + VE R ++ ++ LE++ Sbjct: 523 PLRLTIGSRSLKNGVVEAMTRENNMKTEIELEQL 556 >gi|256846083|ref|ZP_05551541.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] gi|256719642|gb|EEU33197.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] Length = 567 Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YSRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYS 224 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 73/178 (41%), Positives = 103/178 (57%), Gaps = 2/178 (1%) Query: 259 TSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K+ ++ + K SARGIE G IF G KYS M+AT+ +GK Y+ MG Y Sbjct: 381 VTDIRTAKVGENCITGGKLYSARGIECGQIFKLGDKYSKAMNATYLDENGKTQYMLMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R +AA IE ++D GIIWP S+AP+ + +I ++V EKIY L + Sbjct: 441 GIGVTRTMAAAIEQNNDENGIIWPVSIAPYTVDVIPANIKNEVQVSLAEKIYNELEEEKI 500 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D DD E+ G +F ADL+GFP +V+VG K + VE+K R TG ++ E+I Sbjct: 501 DTMLDDRDEKPGFKFKDADLIGFPFKVVVG-KRADEGIVELKIRRTGETLELPQNEII 557 >gi|294784787|ref|ZP_06750075.1| proline--tRNA ligase [Fusobacterium sp. 3_1_27] gi|294486501|gb|EFG33863.1| proline--tRNA ligase [Fusobacterium sp. 3_1_27] Length = 567 Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YSRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYS 224 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/158 (43%), Positives = 94/158 (59%), Gaps = 1/158 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE G IF G KYS M+AT+ +GK Y+ MG YGIG R +AA IE ++D G Sbjct: 401 SARGIECGQIFKLGDKYSKVMNATYLDENGKTQYMLMGCYGIGVTRTMAAAIEQNNDENG 460 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP S+AP+ + +I ++V EKIY L + D DD E+ G +F ADL Sbjct: 461 IIWPVSIAPYTVDVIPANIKNEVQVSLAEKIYNELEEEKIDAMLDDRDEKPGFKFKDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +GFP +++VG K + VE+K R TG ++ E+I Sbjct: 521 IGFPFKIVVG-KRADEGIVELKIRRTGETLELPQNEII 557 >gi|256028463|ref|ZP_05442297.1| prolyl-tRNA synthetase [Fusobacterium sp. D11] gi|289766384|ref|ZP_06525762.1| prolyl-tRNA synthetase [Fusobacterium sp. D11] gi|289717939|gb|EFD81951.1| prolyl-tRNA synthetase [Fusobacterium sp. D11] Length = 567 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYS 224 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 72/159 (45%), Positives = 97/159 (61%), Gaps = 1/159 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE G IF G KYS M+AT+ G+ HY+ MG YGIG R +AA IE +D G Sbjct: 401 SARGIECGQIFKLGDKYSKAMNATYLDEKGQSHYMLMGCYGIGVTRTMAAAIEQYNDENG 460 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP S+AP+ + +I + ++ + EKIY L + DV DD E+ G +F ADL Sbjct: 461 IIWPVSIAPYIVDVIPVNIKNEAQVNLAEKIYNNLQEEKIDVMLDDRDEKPGFKFKDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +GFP +V+VG K + VE+K R TG ++S E+IN Sbjct: 521 IGFPFKVVVGKK-AEEGIVELKIRKTGETFEISQNEIIN 558 >gi|205373425|ref|ZP_03226229.1| prolyl-tRNA synthetase [Bacillus coahuilensis m4-4] Length = 494 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 156/224 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F+P L+E P DAEI SH+L+LR G + Q++ GIYS+LPLG++ L V IIREE Sbjct: 1 MKQSMTFIPTLRETPADAEIKSHQLLLRAGFMKQNTSGIYSFLPLGKRVLAKVEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +EM +P LQ A+LW ESGR+ +YG E++R+ DR+ + G THEEV+T + R Sbjct: 61 MENAGVVEMFMPALQQAELWQESGRWYTYGSELMRMKDRHGREFALGATHEEVITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP + YQIQ K+RDE RPRFG++R REF+MKDAYSF + E +Y+++F + Sbjct: 121 DVKSYKKLPLSLYQIQTKYRDEARPRFGLLRGREFIMKDAYSFHASKESLDETYDRIFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG +GG +HEF+VL++ GE + S Sbjct: 181 YSNIFERCGLNYRAVIADSGAMGGKDTHEFMVLSEVGEDTIAYS 224 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 6/106 (5%) Query: 269 DSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ K V A+GIEVGH+F GT+YS M+AT +GK ++ MG YGIG R +A Sbjct: 389 DPSPDGKGVIKFAKGIEVGHVFKLGTRYSEAMNATVLDENGKAKHMIMGCYGIGVSRTLA 448 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 AV E +D G++WP+++AP+++ ++ + + D +KI R Sbjct: 449 AVAEQYNDENGLLWPENLAPYQVHIVPVNMKN----DETKKIRRRF 490 >gi|62126444|gb|AAX64147.1| proline tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 547 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 125/278 (44%), Positives = 174/278 (62%), Gaps = 24/278 (8%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+REE N GAIE+S+P +Q ADLW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++ YG E+LR DR ++ + GPTHEEV+TD+ R+ + SY+ LP F+QIQ KFRDE+RP Sbjct: 61 WEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREFLMKDAYSF + E + +Y+ M+ +Y RIF R+GL ++A++G IGG+ Sbjct: 121 RFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSRIFSRMGLDFRAVQADTGSIGGN 180 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 SHEF VLA +GE + S+ +D+ I L + T AAT ++ Sbjct: 181 ASHEFQVLAQSGEDDIVF----------SDVSDYAANIELAEAIAPQTPRAAATQEM--- 227 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 L D+ N + A +E +++LP+ T K Sbjct: 228 TLVDT--PNAKTIAELVE---------QFNLPIEKTVK 254 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 359 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 418 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 419 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 478 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 479 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGKKSLIKTGDIV 538 Query: 436 NY 437 +Y Sbjct: 539 DY 540 >gi|257462679|ref|ZP_05627088.1| prolyl-tRNA synthetase [Fusobacterium sp. D12] Length = 593 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 158/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEI SH+L+LR GMI + + G+Y++LPLG + L V IIREE Sbjct: 25 MRFSKAYIKTLKETPKEAEIISHQLLLRAGMIKKLASGLYTYLPLGFRTLKKVENIIREE 84 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ +P LQ A+LW ESGR++ G+EM+RL DR+ + + GPT+EEV+TDI R+ Sbjct: 85 MDRAGSQELLMPVLQPAELWRESGRWNVMGEEMVRLKDRHQRDFVLGPTNEEVITDIVRN 144 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ K RDE RPRFG+MRSREF+MKDAYSF + E + M + Sbjct: 145 DISSYKSLPINLYHIQTKVRDERRPRFGLMRSREFIMKDAYSFHTSQESLDEEFENMKNT 204 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 205 YTRIFERCGLKFRPVEADSGAIGGSGSQEFHVLAESGEDEIIYS 248 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/160 (43%), Positives = 99/160 (61%), Gaps = 5/160 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE GHIF G KYS + A++ G+ + MG YGIG R +AA IE ++D G Sbjct: 427 SARGIECGHIFKLGDKYSKALGASYLDEKGESKIMLMGCYGIGVGRTMAAAIEQNYDENG 486 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP+ + +I NIK +Q+ E+IY L+K D DD E+ G +F A Sbjct: 487 IIWPTALAPYLVDVIPANIKNTEQM--KLAEEIYENLNKEHLDAMIDDRDERPGFKFKDA 544 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DL+GFP ++I G K +++ VE+K R TG ++S +EVI Sbjct: 545 DLIGFPFKIICGKK-AAENIVELKIRKTGETLEVSADEVI 583 >gi|187251094|ref|YP_001875576.1| prolyl-tRNA synthetase [Elusimicrobium minutum Pei191] gi|226701286|sp|B2KCB2|SYP_ELUMP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|186971254|gb|ACC98239.1| Prolyl-tRNA synthetase [Elusimicrobium minutum Pei191] Length = 573 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 113/221 (51%), Positives = 149/221 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++Y+LP L+E P+DA+ S KLMLR G+I + + GIY WLPLG K L V I+REE Sbjct: 1 MKLTQYYLPTLKEAPKDADTISAKLMLRAGLIRKTASGIYEWLPLGLKVLKKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P +Q +LW ESGR+ YGKE+LR+ DR + PT EEV+TD+ R Sbjct: 61 MDAAGAHEVWLPLIQPKELWEESGRWTYYGKELLRIKDRKGAEFCFAPTAEEVITDVVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQ KFRDE+RPRFGVMR+REF MKDAYSF T E Y K F + Sbjct: 121 DVTSYKQLPVALYQFASKFRDEIRPRFGVMRAREFYMKDAYSFHATEESINEWYLKFFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y ++ R G K + A++G IGG+ SHEF+VLADTGE ++ Sbjct: 181 YKKVCTRCGFKFKAVEADTGAIGGNFSHEFMVLADTGENEI 221 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 64/145 (44%), Positives = 87/145 (60%), Gaps = 1/145 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH F GTKYS M A F + K H MG YGIG R+VAA IE SHD GII Sbjct: 407 RGIEVGHTFKLGTKYSQSMKAEFLDENQKSHPFLMGCYGIGISRIVAAAIEQSHDENGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +APF I L++I + ++ + IY +L++ G +V DD E+ G +F ADL+ Sbjct: 467 WPAPLAPFDIYLVSIDTDINPKVKEETDSIYNQLTQAGLNVLLDDRNERPGIKFKDADLI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLT 423 G P ++++ S+ V + E K R + Sbjct: 527 GLPHRIVISSRTVETGEYEYKQRTS 551 >gi|254730107|ref|ZP_05188685.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] Length = 232 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 154/226 (68%) Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 I+LA+TGE+QV+C + ++D +P +TDF + L IV +WT PYAAT ++H+E + Sbjct: 1 IILAETGESQVYCDRAYLDLAVPGADTDFRNDAQLTDIVTRWTTPYAATDEMHDEADWAK 60 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 + +VSARGIEVGHIF+FGTKYS PM A +G DGK+H V MGSYGIG R+VAA IE Sbjct: 61 VKPESQVSARGIEVGHIFHFGTKYSEPMGAKVQGPDGKEHLVSMGSYGIGPSRLVAAAIE 120 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +SHD GIIWP ++APF ++N+K D+ C EK+Y L+ G D DD E+ G+ Sbjct: 121 ASHDDAGIIWPKTIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGA 180 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +FA DL+G P QVIVG + V+ +VE+K R TG R+ + ++ IN Sbjct: 181 KFATMDLIGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIKAAIN 226 >gi|317060327|ref|ZP_07924812.1| prolyl-tRNA synthetase [Fusobacterium sp. D12] gi|313686003|gb|EFS22838.1| prolyl-tRNA synthetase [Fusobacterium sp. D12] Length = 569 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 158/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEI SH+L+LR GMI + + G+Y++LPLG + L V IIREE Sbjct: 1 MRFSKAYIKTLKETPKEAEIISHQLLLRAGMIKKLASGLYTYLPLGFRTLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ +P LQ A+LW ESGR++ G+EM+RL DR+ + + GPT+EEV+TDI R+ Sbjct: 61 MDRAGSQELLMPVLQPAELWRESGRWNVMGEEMVRLKDRHQRDFVLGPTNEEVITDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ K RDE RPRFG+MRSREF+MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKVRDERRPRFGLMRSREFIMKDAYSFHTSQESLDEEFENMKNT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YTRIFERCGLKFRPVEADSGAIGGSGSQEFHVLAESGEDEIIYS 224 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/160 (43%), Positives = 99/160 (61%), Gaps = 5/160 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE GHIF G KYS + A++ G+ + MG YGIG R +AA IE ++D G Sbjct: 403 SARGIECGHIFKLGDKYSKALGASYLDEKGESKIMLMGCYGIGVGRTMAAAIEQNYDENG 462 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP+ + +I NIK +Q+ E+IY L+K D DD E+ G +F A Sbjct: 463 IIWPTALAPYLVDVIPANIKNTEQM--KLAEEIYENLNKEHLDAMIDDRDERPGFKFKDA 520 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DL+GFP ++I G K +++ VE+K R TG ++S +EVI Sbjct: 521 DLIGFPFKIICGKK-AAENIVELKIRKTGETLEVSADEVI 559 >gi|254285550|ref|ZP_04960514.1| prolyl-tRNA synthetase [Vibrio cholerae AM-19226] gi|150424412|gb|EDN16349.1| prolyl-tRNA synthetase [Vibrio cholerae AM-19226] Length = 571 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 114/226 (50%), Positives = 153/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTE 226 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E K+R +G +E +++ +I++ + + Sbjct: 527 GVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIQAKLA 571 >gi|153802043|ref|ZP_01956629.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-3] gi|124122402|gb|EAY41145.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-3] Length = 571 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 114/226 (50%), Positives = 153/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTE 226 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E K+R G +E +++E +I++ + + Sbjct: 527 GVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 571 >gi|297581262|ref|ZP_06943186.1| prolyl-tRNA synthetase [Vibrio cholerae RC385] gi|297534578|gb|EFH73415.1| prolyl-tRNA synthetase [Vibrio cholerae RC385] Length = 571 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 114/226 (50%), Positives = 153/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTE 226 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E K+R +G +E +++ +I++ + + Sbjct: 527 GVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIQTKLA 571 >gi|229525492|ref|ZP_04414897.1| prolyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|229339073|gb|EEO04090.1| prolyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|327483617|gb|AEA78024.1| Prolyl-tRNA synthetase Bacterial type [Vibrio cholerae LMA3894-4] Length = 571 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 114/226 (50%), Positives = 153/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTE 226 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E K+R +G +E +++ +I++ + + Sbjct: 527 GVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIQAKLA 571 >gi|254225105|ref|ZP_04918719.1| prolyl-tRNA synthetase [Vibrio cholerae V51] gi|125622492|gb|EAZ50812.1| prolyl-tRNA synthetase [Vibrio cholerae V51] Length = 571 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 114/226 (50%), Positives = 153/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTE 226 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E K+R +G +E +++ +I++ + + Sbjct: 527 GVPHTLIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIHAKLA 571 >gi|221194513|ref|ZP_03567570.1| prolyl-tRNA synthetase [Atopobium rimae ATCC 49626] gi|221185417|gb|EEE17807.1| prolyl-tRNA synthetase [Atopobium rimae ATCC 49626] Length = 571 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 114/224 (50%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ S + P L+E+P +A +ASH+L+LR GMI + + G+YS+LPL ++L + IIR+E Sbjct: 5 VKMSSLYAPTLKEDPAEAVLASHRLLLRAGMIRKTAAGLYSYLPLAWRSLRKIEEIIRDE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ VP L A+LW ESGR+D YG E++RL DR+++ GPTHEE TD+ R+ Sbjct: 65 MDGIGAQEILVPILTPAELWEESGRWDVYGPELMRLHDRHERKFALGPTHEETFTDLVRN 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF T E + Y+ + Sbjct: 125 ELKSYKQLPVTLYQIQDKFRDEMRPRFGLMRGREFIMKDAYSFSSTQESLQECYDAEKGA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RI R G++++P+ A+SG IGGD S EF+ LAD GE V+C Sbjct: 185 YARICERTGIRALPVIADSGQIGGDTSVEFMALADAGEAALVYC 228 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 99/168 (58%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEV +F GTKYS + ATF DG + MG YGIG R++AAV+E +D GI Sbjct: 402 ARGIEVSQVFQLGTKYSEALGATFTAEDGTEQPFLMGCYGIGVSRLLAAVVEQHNDEHGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP VAP+++ ++ + D +++ + G + DD E+ G +FA ADL+ Sbjct: 462 IWPVCVAPYEVEIVPLSVGDDTVWPVAKQLADSFVEAGLETVVDDRDERPGVKFADADLI 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 G P QVIVG + V++ E+K+R TG R D++L+EV + R + R Sbjct: 522 GLPWQVIVGKRGVANGVAEVKNRETGERVDVALDEVAAWLVSRIAPLR 569 >gi|284048708|ref|YP_003399047.1| prolyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] gi|283952929|gb|ADB47732.1| prolyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] Length = 571 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 119/224 (53%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+E P +A I SHKLMLR G I + + G+YS+LPL ++L + IIREE Sbjct: 1 MRVSQLYAPTLREVPAEAVIESHKLMLRAGYIRKVAGGLYSYLPLAWRSLRKIEEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 TGA E+ +P +Q +++W ESGR+ +YG EM +L DR+ + GPTHEE++T + R Sbjct: 61 MVPTGAQEIMMPIVQPSEIWQESGRWPAYGAEMFKLKDRHGRDFCLGPTHEELVTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP T YQIQ KFRDE RPRFG+MRSREF+MKDAYSFD EG SY + + Sbjct: 121 DLRSYRQLPVTLYQIQSKFRDEKRPRFGLMRSREFIMKDAYSFDKDAEGLDKSYQDEYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RIF R GL P+ A+SG IGG SHEF+ LAD+GE V+C Sbjct: 181 YSRIFTRCGLDYRPVEADSGAIGGKGSHEFMALADSGEAGIVYC 224 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 2/179 (1%) Query: 256 YAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 Y +D+ D P + ARGIEVG +F TKYS + AT+ DGK+H + Sbjct: 378 YTQVADISTAVAGDKCPHCDGHLKEARGIEVGQVFKLNTKYSEALHATYLDVDGKEHPLV 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R +AA IE HD GII P ++AP+++ ++ + D+ +I+ L+ Sbjct: 438 MGCYGIGVGRTLAAAIEQHHDKDGIIMPRNIAPYQVMVLAMNVKDEESWQKAVEIHDALN 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G D DD E+ G +F ADL+G PL++++G K + + +E K R G D+S E Sbjct: 498 QAGIDTLLDDRDERAGVKFKDADLIGCPLRIVIGPKTMKRNAMETKLRCNGEMADVSFE 556 >gi|323142328|ref|ZP_08077160.1| proline--tRNA ligase [Phascolarctobacterium sp. YIT 12067] gi|322413212|gb|EFY04099.1| proline--tRNA ligase [Phascolarctobacterium sp. YIT 12067] Length = 569 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P L+E P +AEI SH+L+LR G + + + G+Y++LPL + + + IIREE Sbjct: 1 MKVSKMYAPTLREVPSEAEIPSHQLLLRAGFMRKSTNGMYTYLPLAWRVIKKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A++W ESGR+D+YG EM+RL DR+ GPTHEE++T + ++ Sbjct: 61 MDHAGCQEIMMPIMQPAEIWKESGRWDAYGAEMVRLKDRHGHEYCLGPTHEEMVTTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE RPRFG+MRSR+F+MKD YSFD G SY M+ + Sbjct: 121 DVRSYRQLPLNLYQIQDKFRDERRPRFGLMRSRDFIMKDGYSFDRDEAGLDVSYKAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSK 225 Y +IF R GL P+ A+SG IGG SHEF+VLAD+GE ++ +C+K Sbjct: 181 YDKIFTRCGLNFRPVEADSGAIGGTGSHEFMVLADSGEAEITYCTK 226 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 63/146 (43%), Positives = 91/146 (62%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE G +F TKYS M T+ +GK+ + MG YGIG R +AA +E SHD G+ Sbjct: 402 ARGIEAGQVFKLHTKYSAAMKCTYLDENGKEQPMVMGCYGIGVGRTMAACVEQSHDADGM 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP ++AP+++ ++ + D+ EKIY L K G +V DD E+ G +F ADL+ Sbjct: 462 IWPVAIAPYEVLVVPVNVKDEASFAKAEKIYNELHKAGVEVVIDDRKERPGVKFKDADLI 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G+PL+V+VG K + ++E+K R TG Sbjct: 522 GYPLRVVVGPKTLQTGELEVKVRKTG 547 >gi|169830802|ref|YP_001716784.1| prolyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] gi|226699139|sp|B1I2J1|SYP_DESAP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169637646|gb|ACA59152.1| prolyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 566 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 112/239 (46%), Positives = 161/239 (67%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y +P L+E P +AE+ SH+L+L+ G I + + G+Y+ LPL + L + IIREE Sbjct: 1 MRASEYLIPTLREIPAEAEVVSHRLLLKAGFIRKAASGVYTLLPLAHRVLRKIMRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q A+LW+ SGR+ YG E+ RL DR+ + GPTHEE++T++ Sbjct: 61 MDRQGGQEILLPIMQPAELWLRSGRWHVYGPELFRLKDRHGRDFCLGPTHEEIITELVMG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++S++ LP YQIQ K+RDE RPRFG++R REF+MKD YSFD G + SY KMF + Sbjct: 121 DVRSHKQLPLLLYQIQNKYRDERRPRFGLLRGREFIMKDLYSFDRDEAGLEVSYRKMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTD 238 Y R+F R GL+ P+ A+SGPIGG +SHEF+VLA +GE V+C +D + E + Sbjct: 181 YQRVFSRCGLEFRPVEADSGPIGGSVSHEFMVLAGSGEALVVYCPEDACGYAANVEKAE 239 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/184 (39%), Positives = 106/184 (57%), Gaps = 3/184 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ + D P+ R ++ARGIEVG +F GTKYS M T+ G + V Sbjct: 378 PLQVVTDLRLVREEDPCPQCGRPLLAARGIEVGQVFKLGTKYSEVMGLTYLDEHGTERPV 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R +AA +E +HD +GIIWP ++APF + ++ + D+V EK Y L Sbjct: 438 VMGCYGIGVTRTLAAAVEQNHDEQGIIWPTAIAPFAVVVVPVNVRDEVQSALAEKAYTVL 497 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 S+ G +V DD E+ G +F ADL+G+PL+V VG V D VE++ R G + + Sbjct: 498 SEAGVEVLLDDRPERPGVKFKDADLVGYPLRVTVGKTAV-DGLVELRLRKNGDTRLVGIG 556 Query: 433 EVIN 436 E+++ Sbjct: 557 ELVD 560 >gi|172057852|ref|YP_001814312.1| prolyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] gi|226701289|sp|B1YI68|SYP_EXIS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|171990373|gb|ACB61295.1| prolyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] Length = 566 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 140/356 (39%), Positives = 207/356 (58%), Gaps = 36/356 (10%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE SH+L+LR G + Q++ GIYS+LPL ++ L + IIR+E Sbjct: 1 MKQSKLFMPTLREVPSDAEAISHQLLLRAGFMRQNAAGIYSYLPLAKRVLSKIETIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P +Q A+LW E+GR+D YG E++RL DR+D+ G THEE++T I R Sbjct: 61 MEGAGAQELLMPAIQPAELWEETGRWDIYGPELMRLTDRHDRRFALGATHEELITSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ+K+RDE RPRFG++R REF+MKDAYSF T E + Y MF + Sbjct: 121 ELNSYKKLPVNLFQIQMKYRDERRPRFGLLRGREFIMKDAYSFHSTQESLEEEYQNMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL+ P+ A+SG IGG +HEF LA GE D + S+ +D+ Sbjct: 181 YTKIFTRVGLEFRPVVADSGAIGGSGTHEFHALAAIGE----------DTIVYSDQSDYA 230 Query: 241 DIISLNSIVEQWT----APYAA----TSDVHNEKLFDS---LPENKRVSARGIEVGHIFY 289 + + V+Q+T AP A T D + S LPE + + Sbjct: 231 ANLEMAESVDQYTKQDKAPEALEEVHTGDAKTIEAVSSVLGLPEQESIKT--------VV 282 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE----SSHDGKGIIWP 341 F T+ L M A +G D + + +++ +Y +GA+ ++ A E + H G + P Sbjct: 283 FKTEQGLVM-ALVRG-DHEVNDIKLKNY-LGALDIMMATDEEIEQALHSTPGTLGP 335 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 95/158 (60%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVG +F GT+YS M+ATF GK + MG YGIG R ++AV+E +D +GI Sbjct: 400 ARGIEVGQVFKLGTRYSEGMNATFLDEGGKAQPLIMGCYGIGVSRTMSAVVEQHYDERGI 459 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP ++APF + LI + + + E +Y L+ G V +DD E+ G +FA ADL+ Sbjct: 460 IWPKAIAPFDVHLIAVNGKNAEQLEVAETVYRELTAAGFSVLFDDRKERAGVKFADADLI 519 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P+++ VG K D VE+K R G E++ +++ Sbjct: 520 GLPVRINVGKK-APDGIVELKARRGGEAEEIQQADLLE 556 >gi|323705637|ref|ZP_08117211.1| prolyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535114|gb|EGB24891.1| prolyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 570 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 114/224 (50%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+P ++E P +AEI SH LML+ M+ + + G+Y +LPLG++ L + I+REE Sbjct: 1 MRLSQLFIPTMREVPAEAEIPSHILMLKAAMMRKLASGVYIYLPLGKRVLKKIEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ + + A+L ESGR+D +G EM +L DRND+ GPTHEEV TD+ R+ Sbjct: 61 MDRAGAQEVLMSAIIPAELLKESGRWDVFGPEMFKLKDRNDREFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP T YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD+ +G S++KM+ + Sbjct: 121 DVKSYRQLPLTIYQIQTKYRDERRPRFGVMRSREFIMKDAYSFDVDWDGLDVSFDKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF R GLK + A++G +GG S EF+V ++ GE + +C Sbjct: 181 YCRIFDRCGLKYTVVEADTGAMGGKDSKEFMVTSNVGEAVIAYC 224 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 71/166 (42%), Positives = 98/166 (59%), Gaps = 1/166 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + A + +G + + MG YGIG R+ AA IE +HD KGII Sbjct: 405 RGIEVGHIFKLGTKYSDALGANYIDENGNEKPIIMGCYGIGLNRIAAAAIEQNHDDKGII 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP S+AP+ + ++ + + V RD EK+Y LSK G +V DD + G +F ADLLG Sbjct: 465 WPMSIAPYHVIIVPVNVSNDVQRDLAEKLYDELSKAGIEVLIDDRDLRAGVKFNDADLLG 524 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 P+++ VG K D+ VE+K R ++ +EV+ S N Sbjct: 525 IPIRITVGKK-AEDNIVELKLRREEKPIELKYDEVLGKVKELISEN 569 >gi|229513024|ref|ZP_04402490.1| prolyl-tRNA synthetase [Vibrio cholerae TMA 21] gi|229349917|gb|EEO14871.1| prolyl-tRNA synthetase [Vibrio cholerae TMA 21] Length = 600 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 114/226 (50%), Positives = 153/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTE 226 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 105/164 (64%), Gaps = 1/164 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P +I+G + + + E K+R +G +E +++ +I++ + Sbjct: 527 GVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIQAKL 570 >gi|220931621|ref|YP_002508529.1| prolyl-tRNA synthetase [Halothermothrix orenii H 168] gi|254782904|sp|B8CW65|SYP_HALOH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219992931|gb|ACL69534.1| prolyl-tRNA synthetase [Halothermothrix orenii H 168] Length = 568 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 160/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++P L+E P++AE+ SH+LMLR G+I + G+YS+LPLG + + + IIR+ Sbjct: 1 MRMSNLYIPTLKEVPKEAEVVSHQLMLRAGLIRNLTAGVYSFLPLGYRVIKKIEGIIRKV 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +GA E+ +P + ++DLW ESGR++ +G M++ DR + GPTHEEV+TD+ R Sbjct: 61 MDESGAQEVLMPVIHTSDLWKESGRWEKFGPLMIKFEDRKGREYCLGPTHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY++LP YQIQ K RDE+RPRFG+MRSREF+MKDAYSFD EG SY M+ + Sbjct: 121 EIRSYKDLPLNLYQIQTKVRDEIRPRFGLMRSREFIMKDAYSFDRDYEGLDKSYQVMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSK 225 Y +F+R GL+ + A++G +GG SHEF+VLA++GE + FC++ Sbjct: 181 YTEVFNRCGLEVRAVEADTGAMGGKDSHEFMVLAESGEDDIAFCNR 226 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 1/164 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVGHIF GTKYS M AT+ +GK+ + MGSYGIG R+VAA IE +HD GIIW Sbjct: 404 GIEVGHIFKLGTKYSESMGATYLDENGKEQPIVMGSYGIGVTRLVAAAIEQNHDEHGIIW 463 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P ++AP+++ ++ + D+V + A E++Y L +V DD E+ G +F ADL+G Sbjct: 464 PKAIAPYQVIILPLGKGDEVNKRA-EELYLELKDNNIEVLLDDRNERAGVKFNDADLIGI 522 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 PL++ +GS+ + +E + R TG ++S+E+ I N Sbjct: 523 PLRLTIGSRSLDKGVIEARVRGTGQDYEISVEDAIKDIKKLLEN 566 >gi|309787126|ref|ZP_07681738.1| prolyl-tRNA synthetase [Shigella dysenteriae 1617] gi|308924704|gb|EFP70199.1| prolyl-tRNA synthetase [Shigella dysenteriae 1617] Length = 547 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 110/199 (55%), Positives = 144/199 (72%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+REE N GAIE+S+P +Q ADLW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++ YG E+LR DR ++ + GPTHEEV+TD+ R+ + SY+ LP FYQIQ KFRDE+RP Sbjct: 61 WEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREFLMKDAYSF + E + +Y+ M+ +Y +IF R+GL ++A++G IGG Sbjct: 121 RFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGS 180 Query: 206 LSHEFIVLADTGETQVFCS 224 SHEF VLA +GE V S Sbjct: 181 ASHEFQVLAQSGEDDVVFS 199 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 359 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 418 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 419 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 478 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 479 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 538 Query: 436 NY 437 Y Sbjct: 539 EY 540 >gi|312970296|ref|ZP_07784478.1| prolyl-tRNA synthetase [Escherichia coli 1827-70] gi|110613794|gb|ABF02461.1| proline tRNA synthetase [Shigella flexneri 5 str. 8401] gi|310337794|gb|EFQ02905.1| prolyl-tRNA synthetase [Escherichia coli 1827-70] gi|313646744|gb|EFS11203.1| prolyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|323160236|gb|EFZ46194.1| prolyl-tRNA synthetase [Escherichia coli E128010] gi|332098769|gb|EGJ03729.1| prolyl-tRNA synthetase [Shigella boydii 3594-74] gi|332762199|gb|EGJ92468.1| prolyl-tRNA synthetase [Shigella flexneri 4343-70] Length = 547 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 110/199 (55%), Positives = 144/199 (72%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+REE N GAIE+S+P +Q ADLW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++ YG E+LR DR ++ + GPTHEEV+TD+ R+ + SY+ LP FYQIQ KFRDE+RP Sbjct: 61 WEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREFLMKDAYSF + E + +Y+ M+ +Y +IF R+GL ++A++G IGG Sbjct: 121 RFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGS 180 Query: 206 LSHEFIVLADTGETQVFCS 224 SHEF VLA +GE V S Sbjct: 181 ASHEFQVLAQSGEDDVVFS 199 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 359 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 418 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 419 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 478 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 479 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 538 Query: 436 NY 437 Y Sbjct: 539 EY 540 >gi|229530020|ref|ZP_04419410.1| prolyl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|229333794|gb|EEN99280.1| prolyl-tRNA synthetase [Vibrio cholerae 12129(1)] Length = 571 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 114/226 (50%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFQLWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTE 226 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E K+R G +E +++E +I++ + + Sbjct: 527 GVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 571 >gi|323181612|gb|EFZ67027.1| prolyl-tRNA synthetase [Escherichia coli 1357] Length = 547 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 110/199 (55%), Positives = 144/199 (72%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+REE N GAIE+S+P +Q ADLW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++ YG E+LR DR ++ + GPTHEEV+TD+ R+ + SY+ LP FYQIQ KFRDE+RP Sbjct: 61 WEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREFLMKDAYSF + E + +Y+ M+ +Y +IF R+GL ++A++G IGG Sbjct: 121 RFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGS 180 Query: 206 LSHEFIVLADTGETQVFCS 224 SHEF VLA +GE V S Sbjct: 181 ASHEFQVLAQSGEDDVVFS 199 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 111/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 360 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 419 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 420 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 479 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 480 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVE 539 Query: 437 Y 437 Y Sbjct: 540 Y 540 >gi|323176512|gb|EFZ62104.1| prolyl-tRNA synthetase [Escherichia coli 1180] Length = 547 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 110/199 (55%), Positives = 144/199 (72%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+REE N GAIE+S+P +Q ADLW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++ YG E+LR DR ++ + GPTHEEV+TD+ R+ + SY+ LP FYQIQ KFRDE+RP Sbjct: 61 WEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREFLMKDAYSF + E + +Y+ M+ +Y +IF R+GL ++A++G IGG Sbjct: 121 RFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGS 180 Query: 206 LSHEFIVLADTGETQVFCS 224 SHEF VLA +GE V S Sbjct: 181 ASHEFQVLAQSGEDDVVFS 199 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 359 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 418 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 419 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 478 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++I Sbjct: 479 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDII 538 Query: 436 NY 437 Y Sbjct: 539 EY 540 >gi|91204601|emb|CAJ70829.1| strongly similar to prolyl-tRNA synthetase [Candidatus Kuenenia stuttgartiensis] Length = 576 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 116/218 (53%), Positives = 155/218 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ +P L+E+P +AEI SHKLM+R G+I + + G Y++LPLG L+ V AI+REE Sbjct: 1 MKWSQTLIPTLKESPSEAEIDSHKLMIRAGLIRRITSGAYAYLPLGTLVLNKVIAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GAIE+ +P LQ DL ESGR D +G +++ DR+ K + PTHEEV+T I ++ Sbjct: 61 MNRSGAIEVFLPALQHLDLLKESGRLDVFGADLITFQDRHGKETVLSPTHEEVITYIVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQIQ KFRDE+RPRFGV+RS+EF+MKDAYSFDL +G +SY M+ + Sbjct: 121 EINSYKQLPITLYQIQTKFRDEMRPRFGVLRSKEFIMKDAYSFDLDEKGLNNSYQLMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF R L I A+SG +GGD SHEF+V + GE Sbjct: 181 YCRIFDRCRLDYIIAEADSGAMGGDASHEFMVPSPVGE 218 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 64/147 (43%), Positives = 95/147 (64%), Gaps = 1/147 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++GIE+GH+F GTKY+ + A + ADGK+ MG YGIG R++AA+IE SHD GI Sbjct: 401 SQGIEIGHVFKLGTKYTSALKAHYLDADGKEKPKVMGCYGIGVNRIIAAIIEISHDENGI 460 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV-GCDVFWDDMGEQIGSQFAVADL 397 IWP S+AP+ + +I + D +C DA IY ++ + G DV DD + G +F ADL Sbjct: 461 IWPMSLAPYHVIIIPVNVKDTICMDAARSIYDDMTNMKGIDVLLDDRDLRPGVKFKDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +G P+++I+G K+ ++EIK R +G Sbjct: 521 IGIPVKIIIGKKYTETKELEIKLRKSG 547 >gi|262165127|ref|ZP_06032864.1| prolyl-tRNA synthetase [Vibrio mimicus VM223] gi|262172111|ref|ZP_06039789.1| prolyl-tRNA synthetase [Vibrio mimicus MB-451] gi|261893187|gb|EEY39173.1| prolyl-tRNA synthetase [Vibrio mimicus MB-451] gi|262024843|gb|EEY43511.1| prolyl-tRNA synthetase [Vibrio mimicus VM223] Length = 571 Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 114/226 (50%), Positives = 153/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLQKSYDAMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A+SG IGG+ S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADSGAIGGNGSQEFHVLAESGEDLIVFSTE 226 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 107/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSAKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQEAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P VI+G + + + E K+R G +E +++E +I++ + + Sbjct: 527 GVPHTVIIGDRSMDEGHFEYKNRRNGEKEAVAMESIIDFIQAKLA 571 >gi|258625204|ref|ZP_05720117.1| prolyl-tRNA synthetase [Vibrio mimicus VM603] gi|258582494|gb|EEW07330.1| prolyl-tRNA synthetase [Vibrio mimicus VM603] Length = 571 Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 114/226 (50%), Positives = 153/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLQKSYDAMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A+SG IGG+ S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADSGAIGGNGSQEFHVLAESGEDLIVFSTE 226 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 107/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSAKMNCGVLDSNGKNAILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQEAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P VI+G + + + E K+R G +E +++E +I++ + + Sbjct: 527 GVPHTVIIGDRSMDEGHFEYKNRRNGEKEAVAMESIIDFIQAKLA 571 >gi|260757797|ref|ZP_05870145.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260668115|gb|EEX55055.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] Length = 232 Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 154/226 (68%) Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++LA+TGE+QV+C + ++D +P +TDF + L IV +WT PYAAT ++H+E + Sbjct: 1 MILAETGESQVYCDRAYLDLAVPGADTDFRNDAQLTDIVTRWTTPYAATDEMHDEADWAK 60 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 + +VSARGIEVGHIF+FGTKYS PM A +G DGK+H V MGSYGIG R+VAA IE Sbjct: 61 VKPESQVSARGIEVGHIFHFGTKYSEPMGAKVQGPDGKEHLVSMGSYGIGPSRLVAAAIE 120 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +SHD GIIWP ++APF ++N+K D+ C EK+Y L+ G D DD E+ G+ Sbjct: 121 ASHDDAGIIWPKTIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGA 180 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +FA DL+G P QVIVG + V+ +VE+K R TG R+ + ++ IN Sbjct: 181 KFATMDLIGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIKAAIN 226 >gi|52080260|ref|YP_079051.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52785637|ref|YP_091466.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|319645960|ref|ZP_08000190.1| prolyl-tRNA synthetase [Bacillus sp. BT1B_CT2] gi|81825303|sp|Q65JJ1|SYP_BACLD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|52003471|gb|AAU23413.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52348139|gb|AAU40773.1| ProS [Bacillus licheniformis ATCC 14580] gi|317391710|gb|EFV72507.1| prolyl-tRNA synthetase [Bacillus sp. BT1B_CT2] Length = 572 Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 153/224 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ +P L+E P DAE SH+L+LR G I Q++ G+YS++PL K + + +I+REE Sbjct: 1 MRQSRTLIPTLREVPADAEAKSHQLLLRAGFIRQNTSGVYSYMPLANKVIHKIQSIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P LQ A+ W ESGR+ +YG E++RL DR+ + G THEEV+T I R Sbjct: 61 MEKINAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRHGREFALGATHEEVITSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +YN M+ + Sbjct: 121 EVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHSSAESLDETYNDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +F R GL P+ A+SG +GG +HEF+ L+D GE + S Sbjct: 181 YTNVFTRCGLNFRPVIADSGAMGGKDTHEFMALSDVGEDTIAYS 224 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 95/159 (59%), Gaps = 1/159 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG +F GT+YS M AT+ +G+ + MG YGIG R ++A++E HD KG+ Sbjct: 403 AKGIEVGQVFKLGTRYSEAMDATYLDENGRAQPMLMGCYGIGISRTLSAIVEQHHDDKGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP V P+ + ++ + + EK+Y G DV +DD E+ G +FA +DL+ Sbjct: 463 IWPLEVTPYDLHILALNMKNDAQVQLAEKLYEEFKANGYDVLFDDRAERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P+++ VG K + VE+K R TG +++ +E+ ++ Sbjct: 523 GLPIRITVG-KRADEGVVEVKIRKTGESFEIAADELFDF 560 >gi|325109306|ref|YP_004270374.1| prolyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] gi|324969574|gb|ADY60352.1| Prolyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] Length = 578 Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 116/229 (50%), Positives = 158/229 (68%), Gaps = 4/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++ +P ++E P DAE+ SH+LMLR G+I Q G Y++LPLG +++ AIIREE Sbjct: 1 MRWTQSLIPTMKETPADAEVPSHQLMLRAGLIRQLMAGAYTYLPLGWRSVQKAAAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDK--AMIYGPTHEEVMTDI 117 R GA E+ +P LQ +L+ +GR +++G +++ R D+ + GPTHEEV+TD+ Sbjct: 61 MERAGACELHMPALQPIELFERTGRINAFGSVLMKFDVPRGDRKVPVALGPTHEEVVTDL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 HI SYR LP T YQIQ KFR+E RPRFGV+R+ EFLMKDAYSF + E +Y+ M Sbjct: 121 ISRHISSYRQLPLTVYQIQTKFRNEERPRFGVLRTSEFLMKDAYSFASSLEQLNTTYDAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 + +Y R+F R GL+ IP+ AESGPIGGD SHEF++ AD GE Q V+C K Sbjct: 181 YDAYCRVFKRCGLEFIPVEAESGPIGGDASHEFMIPADNGEDQIVYCKK 229 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 2/193 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T D+ N D P++ GIEVGH+F GTKYS +SA + K H + MG Sbjct: 384 THDLRNAAAGDPCPKSGEPMDLVHGIEVGHVFKLGTKYSESLSAMYLDEHEKRHPIIMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+VA + E+ HD KG++WP S+AP+++ +I +K D+ A IYA L + G Sbjct: 444 YGIGVNRIVAGLAETRHDDKGLLWPISIAPYEVLIIPLKTDDEELMSAANSIYAELKEQG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD + G +F ADL+G P ++++G K + + E+K R E + L++V+ Sbjct: 504 VDVLMDDRSARPGVKFNDADLIGIPYRIVIGGKGLKEGVAEVKARTDADAEKVPLDQVVA 563 Query: 437 YASHRFSNNRPVL 449 + S + L Sbjct: 564 NVTSLVSAAKEAL 576 >gi|296125160|ref|YP_003632412.1| prolyl-tRNA synthetase [Brachyspira murdochii DSM 12563] gi|296016976|gb|ADG70213.1| prolyl-tRNA synthetase [Brachyspira murdochii DSM 12563] Length = 578 Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 116/226 (51%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+P L+E P DA IAS+KLM+R + + S G+YS+LPLG + L ++ IIREE Sbjct: 1 MRLSKLFMPTLKEAPSDAIIASNKLMIRAALARKISNGLYSYLPLGVRVLSKISNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E +P L S +L SGR++ + KE+ RL DRND M GPTHEE T ++ Sbjct: 61 MDAIGSNECIMPILVSKELLTPSGRWERFKKELFRLKDRNDVDMAMGPTHEEAFTITAQN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY++LP T YQI KFRDE+RPRFGV+RS+EF MKDAYSF +T E +YN M + Sbjct: 121 EIQSYKDLPLTLYQIHTKFRDEIRPRFGVIRSKEFTMKDAYSFHITKECLDKTYNDMSRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFCSK 225 Y +IF R+GL ++ ++A+SG +GG+ S EF+VL++ G ET +FCSK Sbjct: 181 YTKIFKRMGLDTVSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSK 226 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 2/183 (1%) Query: 261 DVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D K D PE +G+E+GHIF G KY+ + + K+ MG YG Sbjct: 384 DFRTAKEGDKCPECGETLYQKKGLELGHIFKLGDKYTQAFNFKVLDENNKEITPIMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R +A+VIE ++D KGII+P SVAP++ ++ I + E+IY L+ + + Sbjct: 444 IGVNRALASVIEQNYDDKGIIFPISVAPYEAIVVAIDKEGEESFKKAEEIYNALNALKVE 503 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 +DD E++G + DL+G P++++VG K + VE K R + ++ +E++ Y Sbjct: 504 TMFDDRKERLGVKLNDCDLIGIPMRIMVGKKSLQRGVVEFKLRSSSESIEVKADEIVEYV 563 Query: 439 SHR 441 + Sbjct: 564 KAK 566 >gi|328955488|ref|YP_004372821.1| prolyl-tRNA synthetase [Coriobacterium glomerans PW2] gi|328455812|gb|AEB07006.1| prolyl-tRNA synthetase [Coriobacterium glomerans PW2] Length = 576 Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 109/224 (48%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + P L+E+P +A++ SH+L+LR GMI + + GIYS+LPL ++L + I+R+E Sbjct: 5 MKMSNLYAPTLKEDPAEADLVSHRLLLRAGMIRKMASGIYSYLPLAWRSLKKIEEIVRDE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E +P L A+LW SGR+D+YG E++R+ DR+ + GPTHEE +TD+ ++ Sbjct: 65 MDAIGAQECLLPILTDAELWRLSGRWDAYGPELMRIVDRHQRQFALGPTHEETVTDLVKN 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP + YQIQ KFRDE+RPRFG+MR REF+MKDAYSF T + Y M + Sbjct: 125 ELASYRQLPVSLYQIQTKFRDEMRPRFGLMRGREFIMKDAYSFSATQASLQECYEDMKAA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y RI R GL ++P+ A+SG IGGD S E++ LAD+GE V+C Sbjct: 185 YGRICERCGLAALPVAADSGQIGGDTSVEYMALADSGEASLVYC 228 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 91/230 (39%), Positives = 125/230 (54%), Gaps = 19/230 (8%) Query: 223 CSKDFMDF----PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 C + +DF P + + D+ L ++V P V E+L Sbjct: 359 CGANEVDFHLTGACPGRDFEVDEWADLVTVVAGDPCP------VCGEEL---------SG 403 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEV +F GTKYSLPM ATF G+ + MG YG+G R +AAV+E HD GI Sbjct: 404 ARGIEVSQVFQLGTKYSLPMGATFTDEAGRTQPMLMGCYGVGISRTLAAVVEQHHDEAGI 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAP+++S++ + Q C A +++ LS G DV DD E+ G +FA DL+ Sbjct: 464 IWPVSVAPYEVSIVLLDTKLQACVAAGDRLAFELSAGGIDVVLDDRAERPGVKFADNDLM 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 GFP Q+IVG + ++ VEIK R TG R D++L++ NYA R R V Sbjct: 524 GFPYQIIVGKRGIAAGTVEIKDRATGERVDVALDDASNYAVERIRRARGV 573 >gi|225619417|ref|YP_002720643.1| prolyl-tRNA synthetase [Brachyspira hyodysenteriae WA1] gi|254782887|sp|C0QY98|SYP_BRAHW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225214236|gb|ACN82970.1| prolyl-tRNA synthetase [Brachyspira hyodysenteriae WA1] Length = 578 Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 116/226 (51%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+P L+E P DA IAS+KLMLR + + S G+YS+LPLG + L+ ++ IIREE Sbjct: 1 MRLSKLFMPTLKEAPSDAIIASNKLMLRAALARKISNGLYSYLPLGVRVLNKISNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E +P L S +L SGR++ + KE+ RL DRND M GPTHEE T ++ Sbjct: 61 MDAIGSNECIMPILVSKELLTPSGRWERFKKELFRLKDRNDVDMAMGPTHEEAFTITAQN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY++ P T YQI KFRDE+RPRFGV+RS+EF MKDAYSF +T E +YN M + Sbjct: 121 EIQSYKDFPLTLYQIHTKFRDEIRPRFGVIRSKEFTMKDAYSFHITKECLDKTYNDMSGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFCSK 225 Y +IF R+GL ++ ++A+SG +GG+ S EF+VL++ G ET +FCSK Sbjct: 181 YTKIFKRMGLDTVSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSK 226 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 93/162 (57%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +G+E+GHIF G KY+ + + K+ MG YGIG R +A+VIE ++D KGII Sbjct: 405 KGLELGHIFKLGDKYTEAFNFKVLDENNKEITPIMGCYGIGVNRALASVIEQNYDDKGII 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P SVAP++ ++ I + E+IY L+ +G + +DD E++G + DL+G Sbjct: 465 FPISVAPYEAIVVAIDKETEDSFKKAEEIYNTLNSIGVETMFDDRKERLGVKLNDCDLIG 524 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 P+++IVG K + VE K R + ++ +E++I Y + Sbjct: 525 IPIRIIVGKKSLQKGVVEFKLRKSQESVEVKVEDIIEYVKTK 566 >gi|149183492|ref|ZP_01861921.1| prolyl-tRNA synthetase [Bacillus sp. SG-1] gi|148848804|gb|EDL63025.1| prolyl-tRNA synthetase [Bacillus sp. SG-1] Length = 569 Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 113/221 (51%), Positives = 153/221 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S +P L+E P DAE+ SH+ +LR G I Q+S GIYS+LPLG+K L V IIREE Sbjct: 1 MKQSMTLIPTLRETPADAEVKSHQQLLRAGFIRQNSSGIYSFLPLGRKVLQKVEEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +E+ +P LQ A+LW ESGR+ +YG E++RL DR+ ++ G THEEV+T + R Sbjct: 61 MINAGGVELLMPALQQAELWQESGRWGTYGPELMRLEDRHKRSFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y K+F + Sbjct: 121 EIKSYKKLPLTLFQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHSSYESLDDTYEKIFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y +F R GL + A+SG +GG +HEF+VL+D GE + Sbjct: 181 YSNVFTRCGLNFRAVIADSGAMGGKDTHEFMVLSDIGEDTI 221 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 61/148 (41%), Positives = 87/148 (58%), Gaps = 1/148 (0%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V A+GIEVGH+F GT+YS M A + +G+ + MG YGIG R +AAV E D Sbjct: 401 VFAKGIEVGHVFKLGTRYSDAMGAQYLDENGRAQSMIMGCYGIGVSRTLAAVAEQYCDEN 460 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP S+ PF + ++ I + R+ E++Y+ L + DV DD E+ G +F +D Sbjct: 461 GLQWPSSLTPFDVHIVPINIKNDEQRELAEQLYSELKEQRFDVLLDDRQERPGVKFTDSD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 L+G P +V VG K +D VE+K R TG Sbjct: 521 LIGLPFRVTVGKK-AADGVVEVKIRKTG 547 >gi|289662612|ref|ZP_06484193.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668443|ref|ZP_06489518.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 564 Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 115/218 (52%), Positives = 151/218 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE Sbjct: 181 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGE 218 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/153 (38%), Positives = 86/153 (56%), Gaps = 3/153 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +HD GI Sbjct: 402 ARGIEVGHVFQLGSQYAQALQATVIDEGGKAAVMKMGCYGIGISRIVAAAIEQNHDEAGI 461 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +AP++ + +IN K D A + + L G D DD G + G+ FA + Sbjct: 462 IWPAPMAPWQVVVCVINPK-QDANVVAAAQALLDELIAAGLDAALDDRGLRPGAMFADME 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 LLG P +V+V + ++ E + R E++ Sbjct: 521 LLGIPHRVVVSERGLAAGTFEYRARTADAAENL 553 >gi|237739058|ref|ZP_04569539.1| prolyl-tRNA synthetase [Fusobacterium sp. 2_1_31] gi|229423658|gb|EEO38705.1| prolyl-tRNA synthetase [Fusobacterium sp. 2_1_31] Length = 567 Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 154/224 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR MI + + GIY++LPLG + + + IIREE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAAMIKKLASGIYAYLPLGYRTIRKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGAEMLRLKDRHERDFVLSPTQEEMITSIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKD YSF + E + M + Sbjct: 121 DISSYKSLPLNLYHIQTKFRDERRPRFGLMRGREFTMKDGYSFHTSQESLDEEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYS 224 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 76/160 (47%), Positives = 97/160 (60%), Gaps = 5/160 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE G IF G KYS M+AT+ +GK Y+ MG YGIG R +AA IE ++D G Sbjct: 401 SARGIECGQIFKLGDKYSKAMNATYLDENGKTQYMLMGCYGIGVTRTMAAAIEQNNDENG 460 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP S+AP+ + +I NIK QV EKIY L DV DD E+ G +F A Sbjct: 461 IIWPVSIAPYIVDVIPANIKNEGQVS--LAEKIYNELQAEDIDVMLDDRDEKPGFKFKDA 518 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DL+GFP +V+VG K + VE+K R TG ++S EV+ Sbjct: 519 DLIGFPFKVVVG-KRADEGIVEVKIRKTGETLEVSESEVV 557 >gi|319649526|ref|ZP_08003682.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317398688|gb|EFV79370.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 567 Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 119/277 (42%), Positives = 175/277 (63%), Gaps = 15/277 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S +P L+E P DAE SH+L+LR G I Q++ GIYS++PL +K L V AIIREE Sbjct: 1 MKQSMTLIPTLKEVPADAETRSHQLLLRAGFIRQNASGIYSYMPLAKKVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P LQ A+LW ESGR+ +YG E++R+ DR+++ G THEEV+T + R Sbjct: 61 MDNAGAVELLMPALQQAELWQESGRWYTYGPELMRMKDRHEREFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF E Y+K+F + Sbjct: 121 AVKSYKKLPLALYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHSNQESLDEMYDKLFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F R GL + A+SG +GG +HEF+VL++ GE D S+ +++ Sbjct: 181 YSNVFRRCGLNFRAVIADSGAMGGKDTHEFMVLSEVGE----------DTIAYSDTSEYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 I + ++ Q++ S+ ++L + ENK+ Sbjct: 231 ANIEMAPVLAQYS-----KSNEEPQELEKAATENKKT 262 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 67/146 (45%), Positives = 88/146 (60%), Gaps = 1/146 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVGHIF GT+YS M ATF +G+ + MG YGIG R +AAV E D G Sbjct: 402 AKGIEVGHIFKLGTRYSEAMEATFLDENGRTQPMIMGCYGIGVSRTMAAVAEQFSDENGF 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP S+APF + LI I D+ E++Y L + DV DD E+ G +FA +DL+ Sbjct: 462 IWPRSLAPFDLHLIPINMKDETQSAVAEELYTMLKRDRYDVLMDDRQERPGVKFADSDLI 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G P+++ VG K S+ VE+K R TG Sbjct: 522 GLPIRITVGKK-ASEGIVEVKVRKTG 546 >gi|262402773|ref|ZP_06079334.1| prolyl-tRNA synthetase [Vibrio sp. RC586] gi|262351555|gb|EEZ00688.1| prolyl-tRNA synthetase [Vibrio sp. RC586] Length = 571 Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 153/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVETIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ +G + SY+ M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKDGLQKSYDAMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A+SG IGG+ S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADSGAIGGNGSQEFHVLAESGEDLIVFSTE 226 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 107/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E K+R G +E +++E +I++ + + Sbjct: 527 GVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 571 >gi|71898157|ref|ZP_00680343.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Ann-1] gi|71732131|gb|EAO34187.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Ann-1] Length = 564 Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 114/218 (52%), Positives = 150/218 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+R+E Sbjct: 1 MRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM +PT+Q +LW ES R++ +G ++L++ DR Y PT EE +TD R Sbjct: 61 MNRAGAVEMLLPTIQPRELWEESERWEKFGSQLLKIKDRKQAEYCYSPTAEEAVTDYVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L Y M + Sbjct: 121 ELTSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLNDADLVREYENMRAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE Sbjct: 181 YTRIFTRLGLEFRSVQADSGAIGGDASQEFHVIADSGE 218 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 60/152 (39%), Positives = 85/152 (55%), Gaps = 1/152 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G KY+ M AT GK + MG YGIG R+VAA IE +HD GI Sbjct: 402 ARGIEVGHVFQLGRKYTEAMKATVLDEYGKAVTMTMGCYGIGVSRIVAAAIEQNHDVAGI 461 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWP +AP+++++ I D V A E + A L D DD G + G FA +L Sbjct: 462 IWPAPIAPWQVAVCVINPKKDPVITAAAELLLAELQSADVDTVLDDRGLRPGVMFADMEL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +G P +++V + ++ E + R T + E++ Sbjct: 522 IGIPHRIVVSERGLAAGTYEYRARRTAMVENL 553 >gi|255994086|ref|ZP_05427221.1| proline--tRNA ligase [Eubacterium saphenum ATCC 49989] gi|255993754|gb|EEU03843.1| proline--tRNA ligase [Eubacterium saphenum ATCC 49989] Length = 582 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 113/224 (50%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK + L+E P +AE+ SH L+LR GMI + + G+Y ++P+G KAL + IIR E Sbjct: 1 MRLSKAYFKTLREVPAEAELKSHILLLRAGMIRKLASGVYGYMPMGLKALKKIENIIRNE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ + LQ A+LW ESGR+++YG EM R+ DR+D+ GPTHEEV TDI R+ Sbjct: 61 MDAEGCQEILMSALQPAELWKESGRWNAYGPEMWRVCDRHDREFCLGPTHEEVFTDIIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + S+R LP YQIQ K+RDE RPRFG+MRSREF+MKD+YSFD EG SY M+ Sbjct: 121 DVDSHRKLPINLYQIQTKYRDEARPRFGLMRSREFIMKDSYSFDKDEEGLDVSYENMYKR 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y +F R+ L +P+ A++G +GG+ SHEFI AD GE+++ FC Sbjct: 181 YENVFKRMELDVMPVEADTGAMGGNGSHEFIAKADAGESEIAFC 224 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 76/173 (43%), Positives = 96/173 (55%), Gaps = 5/173 (2%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K + RGIEVG +F GTKYS PM A +K D + + MGSYGIG R +AAVIE + D Sbjct: 404 KILYTRGIEVGQLFKLGTKYSEPMKAIYKDEDMNERLMYMGSYGIGVSRTLAAVIEQNSD 463 Query: 335 GKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 GIIWP VAP+ I+LIN DQ E IY +L K DV DD E+ G +F Sbjct: 464 ENGIIWPLPVAPYHVIITLINPSDKDQTA--LAEDIYEKLRKSNIDVILDDRDERPGVKF 521 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 ADL+G P ++ VG + +D KVE K R + DM E + S+ N Sbjct: 522 KDADLIGIPFRINVG-RDAADGKVEFKVRGSNYGMDMKKRETVVIDSNEAVKN 573 >gi|325928567|ref|ZP_08189755.1| prolyl-tRNA synthetase, family II [Xanthomonas perforans 91-118] gi|325541106|gb|EGD12660.1| prolyl-tRNA synthetase, family II [Xanthomonas perforans 91-118] Length = 564 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 115/218 (52%), Positives = 151/218 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE Sbjct: 181 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGE 218 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 91/164 (55%), Gaps = 3/164 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +HD GI Sbjct: 402 ARGIEVGHVFQLGSQYAQALQATVIDEGGKAAVMKMGCYGIGISRIVAAAIEQNHDDAGI 461 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +AP++ + +IN K QV A + + +L G D DD G + G+ FA + Sbjct: 462 IWPAPMAPWQVVVCVINPKQDPQVL-AAAQALLDQLLAAGLDAALDDRGLRPGAMFADME 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 LLG P +V+V + ++ E + R E + + + +H Sbjct: 521 LLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAALFSRLAH 564 >gi|281411733|ref|YP_003345812.1| prolyl-tRNA synthetase [Thermotoga naphthophila RKU-10] gi|281372836|gb|ADA66398.1| prolyl-tRNA synthetase [Thermotoga naphthophila RKU-10] Length = 577 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + P L+E P D E SH+ +LR G I + + GIY++LPLG++ L + I+REE Sbjct: 1 MRMKDLYAPTLKETPSDVETVSHEYLLRGGFIRKVAAGIYTYLPLGRRVLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P LQ A+LW +SGR+D YG EM++L DR+++ GPTHEE++TD+ ++ Sbjct: 61 MNRIGAQEILMPILQPAELWKQSGRWDDYGPEMMKLKDRHERDFTLGPTHEEIVTDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP T YQI K+RDE+RPRFG++R+REF+MKDAYSF + E +Y + + Sbjct: 121 ELRSYKQLPLTLYQIANKYRDEIRPRFGLLRAREFIMKDAYSFHASWESLDETYEQFKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSK 225 Y RI RLG++ + + AE+G IGG+ SHEF+V A GET V FC K Sbjct: 181 YSRIMERLGVRYMIIEAETGTIGGNASHEFVVPAKIGETNVLFCEK 226 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 1/146 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + +GIE+GHIF GTKYS M A F +G+ MG YG G R +AAV+E HD G Sbjct: 400 ATKGIELGHIFKLGTKYSEAMKAYFMDENGEMKPFIMGCYGWGVSRTMAAVVEHFHDENG 459 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 +IWP S+AP+ + + + +D + E IY LS+ G +V DD G +F ADL Sbjct: 460 MIWPLSIAPYTVVVDILNMNDAEQKQIGELIYQVLSEKGEEVVLDDREVSPGFKFKDADL 519 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLT 423 +GFP+++ VG + + + VE+K R + Sbjct: 520 IGFPIRINVG-RSLKEGVVELKKRYS 544 >gi|15643280|ref|NP_228324.1| prolyl-tRNA synthetase [Thermotoga maritima MSB8] gi|81859132|sp|Q9WYY4|SYP_THEMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|4981026|gb|AAD35599.1|AE001727_11 prolyl-tRNA synthetase [Thermotoga maritima MSB8] Length = 577 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + P L+E P D E SH+ +LR G I + + GIY++LPLG++ L + I+REE Sbjct: 1 MRMKDLYAPTLKETPSDVETVSHEYLLRGGFIRKVAAGIYTYLPLGRRVLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P LQ A+LW +SGR+D YG EM++L DR+++ GPTHEE++TD+ ++ Sbjct: 61 MNRIGAQEILMPILQPAELWKQSGRWDDYGPEMMKLKDRHERDFTLGPTHEEIVTDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP T YQI K+RDE+RPRFG++R+REF+MKDAYSF + E +Y + + Sbjct: 121 ELRSYKQLPLTLYQIANKYRDEIRPRFGLLRAREFIMKDAYSFHASWESLDETYEQFKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSK 225 Y RI RLG++ + + AE+G IGG+ SHEF+V A GET V FC K Sbjct: 181 YSRIMERLGVRYMIIEAETGAIGGNASHEFVVPAKIGETNVLFCEK 226 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 87/146 (59%), Gaps = 1/146 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + +GIE+GHIF GTKYS M A F +G+ MG YG G R +AAV+E HD G Sbjct: 400 ATKGIELGHIFKLGTKYSEAMKAYFMDENGEMKPFIMGCYGWGVSRTMAAVVEHFHDENG 459 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 +IWP S+AP+ + + + +D + EKIY LS+ G +V DD G +F ADL Sbjct: 460 MIWPLSIAPYTVVVDILNMNDAEQKQVGEKIYQVLSEKGEEVVLDDREVSPGFKFKDADL 519 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLT 423 +GFP+++ VG + + + VE+K R + Sbjct: 520 IGFPIRINVG-RSLKEGVVELKKRYS 544 >gi|298499001|ref|ZP_07008808.1| prolyl-tRNA synthetase [Vibrio cholerae MAK 757] gi|297543334|gb|EFH79384.1| prolyl-tRNA synthetase [Vibrio cholerae MAK 757] Length = 571 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTE 226 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEKNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E K+R G +E +++E +I++ + + Sbjct: 527 GVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 571 >gi|229523326|ref|ZP_04412733.1| prolyl-tRNA synthetase [Vibrio cholerae TM 11079-80] gi|229339689|gb|EEO04704.1| prolyl-tRNA synthetase [Vibrio cholerae TM 11079-80] Length = 571 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKTGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTE 226 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E K+R +G +E +++ +I++ + + Sbjct: 527 GVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIQAKLA 571 >gi|262197045|ref|YP_003268254.1| prolyl-tRNA synthetase [Haliangium ochraceum DSM 14365] gi|262080392|gb|ACY16361.1| prolyl-tRNA synthetase [Haliangium ochraceum DSM 14365] Length = 584 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 118/244 (48%), Positives = 158/244 (64%), Gaps = 10/244 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F+P L+E+P DA++ SH M+R G + + + G+Y++LPLG + + + I+REE Sbjct: 1 MRLSWAFIPTLKESPADAQVVSHVYMVRGGYMRRLAAGVYTFLPLGWRVIRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P +LW ESGR+ YG E+LR DR +GPTHEEV+ D+ R Sbjct: 61 MDAAGAQEVLMPAAIPGELWQESGRWSKYGPELLRFQDRKGADFCFGPTHEEVVVDMVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSYR LP T YQIQ KFRDELRPR G+MR REF+MKDAYSFD++ E + HSY M+ + Sbjct: 121 DTKSYRELPLTLYQIQSKFRDELRPRAGLMRGREFIMKDAYSFDVSEEAAMHSYTGMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF---------P 231 Y RIF R GL P+ A++G IGG SHEF VLA++GE + S D ++ P Sbjct: 181 YERIFRRCGLDFRPVEADTGAIGGSRSHEFQVLAESGEDAIV-SCDACEYAANVEEAKVP 239 Query: 232 IPSE 235 PSE Sbjct: 240 APSE 243 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 106/170 (62%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+FY GT YS PM TF G++ ++MG YGIG R+ AA IE +HD GI+ Sbjct: 410 RGIEVGHVFYLGTTYSAPMGCTFLDEAGQETAMEMGCYGIGITRIAAAAIEQNHDEGGIV 469 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP S+AP++++++ ++ D+ A E +YA+L + G +V DD E+ G++F ADL+G Sbjct: 470 WPLSIAPYEVAILPLQMKDEDVAAAGETLYAKLKECGIEVLLDDRAERPGAKFKDADLIG 529 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 PL+V +G + + D KVE+K R G E + + + + + + R L Sbjct: 530 IPLRVAIGKRSLDDGKVEVKWRKGGDAELVPVADAVEHVAGLIRAERERL 579 >gi|209694468|ref|YP_002262396.1| prolyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] gi|226731423|sp|B6EHZ8|SYP_ALISL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|208008419|emb|CAQ78577.1| prolyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] Length = 571 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 114/226 (50%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRRLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEEMGPELLRFTDRHARPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y R F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCRAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 104/166 (62%), Gaps = 3/166 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ A+GK+ ++MG YGIG RVVA+ IE ++D GI+ Sbjct: 407 RGIEVGHIFQLGTAYSEAMNCGVLDANGKNSILEMGCYGIGVSRVVASAIEQNNDEYGIV 466 Query: 340 WPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP+++APF ++++ N+ D+V ++A EK+YA L+ +G DV +DD E+ G F +L Sbjct: 467 WPEALAPFTVAIVPMNMYKSDRV-KEAAEKLYAELTAMGIDVLFDDRKERPGVMFKDIEL 525 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +G P V++G + + + E K+R +E + + ++ + + S Sbjct: 526 IGIPHTVVIGDRSMDEGNFEYKNRRANSKEVIEIANIVEHIKAQLS 571 >gi|153216557|ref|ZP_01950520.1| prolyl-tRNA synthetase [Vibrio cholerae 1587] gi|153830554|ref|ZP_01983221.1| prolyl-tRNA synthetase [Vibrio cholerae 623-39] gi|124114232|gb|EAY33052.1| prolyl-tRNA synthetase [Vibrio cholerae 1587] gi|148873952|gb|EDL72087.1| prolyl-tRNA synthetase [Vibrio cholerae 623-39] Length = 571 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTE 226 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E K+R +G +E +++ +I++ + + Sbjct: 527 GVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIQAKLA 571 >gi|162138530|ref|YP_365423.2| prolyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|114152278|sp|Q3BP90|SYP_XANC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 564 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 115/218 (52%), Positives = 151/218 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE Sbjct: 181 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGE 218 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 3/164 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +HD GI Sbjct: 402 ARGIEVGHVFQLGSQYAQALQATVIDEGGKAAVMKMGCYGIGISRIVAAAIEQNHDDAGI 461 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +AP++ + +IN K QV A + + +L G D DD G + G+ FA + Sbjct: 462 IWPAPMAPWQVVVCVINPKQDPQVL-AAAQALLDQLLAAGLDAALDDRGLRPGAMFADME 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 LLG P +V+V + ++ E + R E + + + H Sbjct: 521 LLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAALFSRLGH 564 >gi|15640891|ref|NP_230522.1| prolyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585725|ref|ZP_01675520.1| prolyl-tRNA synthetase [Vibrio cholerae 2740-80] gi|121728341|ref|ZP_01681371.1| prolyl-tRNA synthetase [Vibrio cholerae V52] gi|147673158|ref|YP_001216355.1| prolyl-tRNA synthetase [Vibrio cholerae O395] gi|153819016|ref|ZP_01971683.1| prolyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|153823083|ref|ZP_01975750.1| prolyl-tRNA synthetase [Vibrio cholerae B33] gi|227081051|ref|YP_002809602.1| prolyl-tRNA synthetase [Vibrio cholerae M66-2] gi|229505518|ref|ZP_04395028.1| prolyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229510812|ref|ZP_04400291.1| prolyl-tRNA synthetase [Vibrio cholerae B33] gi|229517932|ref|ZP_04407376.1| prolyl-tRNA synthetase [Vibrio cholerae RC9] gi|229608537|ref|YP_002879185.1| prolyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254848011|ref|ZP_05237361.1| prolyl-tRNA synthetase [Vibrio cholerae MO10] gi|255744669|ref|ZP_05418620.1| prolyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262161198|ref|ZP_06030309.1| prolyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|262168701|ref|ZP_06036396.1| prolyl-tRNA synthetase [Vibrio cholerae RC27] gi|81858145|sp|Q9KTM7|SYP_VIBCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|172047427|sp|A5F340|SYP_VIBC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782925|sp|C3LTC5|SYP_VIBCM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|9655329|gb|AAF94037.1| prolyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121550088|gb|EAX60104.1| prolyl-tRNA synthetase [Vibrio cholerae 2740-80] gi|121629396|gb|EAX61826.1| prolyl-tRNA synthetase [Vibrio cholerae V52] gi|126510449|gb|EAZ73043.1| prolyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|126519409|gb|EAZ76632.1| prolyl-tRNA synthetase [Vibrio cholerae B33] gi|146315041|gb|ABQ19580.1| prolyl-tRNA synthetase [Vibrio cholerae O395] gi|227008939|gb|ACP05151.1| prolyl-tRNA synthetase [Vibrio cholerae M66-2] gi|227012695|gb|ACP08905.1| prolyl-tRNA synthetase [Vibrio cholerae O395] gi|229344647|gb|EEO09621.1| prolyl-tRNA synthetase [Vibrio cholerae RC9] gi|229350777|gb|EEO15718.1| prolyl-tRNA synthetase [Vibrio cholerae B33] gi|229357741|gb|EEO22658.1| prolyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229371192|gb|ACQ61615.1| prolyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254843716|gb|EET22130.1| prolyl-tRNA synthetase [Vibrio cholerae MO10] gi|255737700|gb|EET93094.1| prolyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262022819|gb|EEY41525.1| prolyl-tRNA synthetase [Vibrio cholerae RC27] gi|262028948|gb|EEY47601.1| prolyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] Length = 571 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTE 226 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E K+R G +E +++E +I++ + + Sbjct: 527 GVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 571 >gi|134299814|ref|YP_001113310.1| prolyl-tRNA synthetase [Desulfotomaculum reducens MI-1] gi|172044305|sp|A4J5Y2|SYP_DESRM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|134052514|gb|ABO50485.1| prolyl-tRNA synthetase [Desulfotomaculum reducens MI-1] Length = 569 Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 156/225 (69%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AE+ SH+L+LR G I + + G+Y++LPL Q+ L + IIREE Sbjct: 1 MRVSQMLVPTLREVPAEAEVVSHQLLLRAGFIRKTASGVYTYLPLAQRVLKKLRQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ +P +Q A++W+ESGR+ YG E+ RL DR+D+ GPTHEEV+T + R Sbjct: 61 IDKQGGQELLMPIIQPAEMWLESGRWHVYGPELFRLKDRHDRNFCLGPTHEEVITILIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ +P YQIQ K+RDE RPRFG++R REF+MKD YSFD G SY KM + Sbjct: 121 EVRSYKQMPLLLYQIQNKYRDERRPRFGLLRGREFIMKDLYSFDRDEAGLDISYQKMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCS 224 Y IF R G+K P+ A+SG IGG +HEF+VLA++GE + +CS Sbjct: 181 YTSIFSRCGVKFRPVEADSGAIGGSSTHEFMVLAESGEAAILYCS 225 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/159 (41%), Positives = 102/159 (64%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + ARGIEVG IF GTKYS + ATF +GK+ + MG YGIG R +AA IE ++D Sbjct: 401 LEARGIEVGQIFKLGTKYSKALGATFLDENGKEQPIVMGCYGIGVSRTMAAAIEQNYDKD 460 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 GIIWP S+AP++ +I + D E++Y L++ G + DD E+ G +F AD Sbjct: 461 GIIWPASIAPYQAIVIPVAPKDDNQMKIAEELYKALNQAGVETILDDRSERPGVKFKDAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G+PL+++VG+K V++ VEI+ R +G + +S+++ + Sbjct: 521 LIGYPLRIVVGNKAVTEGVVEIRQRRSGQTDLVSVKDSV 559 >gi|153824641|ref|ZP_01977308.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-2] gi|149741859|gb|EDM55888.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-2] Length = 571 Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTE 226 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 64/165 (38%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A E++YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVQQAAEQLYAELTAAGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E K+R +G +E +++ +I++ + + Sbjct: 527 GVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIHAKLA 571 >gi|148269548|ref|YP_001244008.1| prolyl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|166980169|sp|A5IJQ9|SYP_THEP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|147735092|gb|ABQ46432.1| prolyl-tRNA synthetase [Thermotoga petrophila RKU-1] Length = 577 Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + P L+E P D E SH+ +LR G I + + GIY++LPLG++ L + I+REE Sbjct: 1 MRMKDLYAPTLKETPSDVETVSHEYLLRGGFIRKVAAGIYTYLPLGRRVLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P LQ A+LW +SGR+D YG EM++L DR+++ GPTHEE++TD+ ++ Sbjct: 61 MNRIGAQEILMPILQPAELWKQSGRWDDYGPEMMKLKDRHERDFTLGPTHEEIVTDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP T YQI K+RDE+RPRFG++R+REF+MKDAYSF + E +Y + + Sbjct: 121 ELRSYKQLPLTLYQIANKYRDEIRPRFGLLRAREFIMKDAYSFHASWESLDETYEEFKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSK 225 Y RI RLG++ + + AE+G IGG+ SHEF+V A GET V FC K Sbjct: 181 YSRIMERLGVRYMIIEAETGAIGGNASHEFVVPAKIGETNVLFCEK 226 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 87/146 (59%), Gaps = 1/146 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + +GIE+GHIF GTKYS M A F +G+ MG YG G R +AAV+E HD G Sbjct: 400 ATKGIELGHIFKLGTKYSEAMKAYFMDENGEMKPFIMGCYGWGVSRTMAAVVEHFHDENG 459 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 +IWP S+AP+ + + + +D + EKIY LS+ G +V DD G +F ADL Sbjct: 460 MIWPLSIAPYTVVVDILNMNDAEQKQVGEKIYQVLSEKGEEVVLDDREVSPGFKFKDADL 519 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLT 423 +GFP+++ VG + + + VE+K R + Sbjct: 520 IGFPIRINVG-RSLKEGVVELKKRYS 544 >gi|312966332|ref|ZP_07780558.1| prolyl-tRNA synthetase [Escherichia coli 2362-75] gi|312289575|gb|EFR17469.1| prolyl-tRNA synthetase [Escherichia coli 2362-75] gi|323190405|gb|EFZ75680.1| prolyl-tRNA synthetase [Escherichia coli RN587/1] Length = 547 Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 109/199 (54%), Positives = 145/199 (72%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+REE N GAIE+ +P +Q ++LW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ + SY+ LP FYQIQ KFRDE+RP Sbjct: 61 WEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREFLMKDAYSF + E + +Y+ M+ +Y +IF R+GL ++A++G IGG Sbjct: 121 RFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGS 180 Query: 206 LSHEFIVLADTGETQVFCS 224 SHEF VLA +GE V S Sbjct: 181 ASHEFQVLAQSGEDDVVFS 199 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 112/181 (61%), Gaps = 3/181 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 360 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 419 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 420 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 479 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 480 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 539 Query: 437 Y 437 Y Sbjct: 540 Y 540 >gi|262065930|ref|ZP_06025542.1| proline--tRNA ligase [Fusobacterium periodonticum ATCC 33693] gi|291380410|gb|EFE87928.1| proline--tRNA ligase [Fusobacterium periodonticum ATCC 33693] Length = 567 Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 154/224 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR MI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAAMIKKLASGIYAYLPLGYRTIRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGAEMLRLQDRHERDFVLSPTQEEMITSIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKD YSF + E + M + Sbjct: 121 DISSYKSLPLNLYHIQTKFRDERRPRFGLMRGREFTMKDGYSFHTSQESLDEEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYS 224 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 75/160 (46%), Positives = 97/160 (60%), Gaps = 5/160 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE G IF G KYS M+AT+ +GK Y+ MG YGIG R +AA IE ++D G Sbjct: 401 SARGIECGQIFKLGDKYSKAMNATYLDENGKTQYMLMGCYGIGVTRTMAAAIEQNNDENG 460 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP S+AP+ + +I NIK QV EKIY L DV DD E+ G +F A Sbjct: 461 IIWPVSIAPYIVDVIPANIKNEGQVS--LAEKIYNELQAENIDVMLDDRDEKPGFKFKDA 518 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DL+GFP +V+VG K + VE+K R TG +++ EV+ Sbjct: 519 DLIGFPFKVVVG-KRADEGIVEVKIRRTGETLELAQAEVV 557 >gi|164686598|ref|ZP_02210626.1| hypothetical protein CLOBAR_00190 [Clostridium bartlettii DSM 16795] gi|164604327|gb|EDQ97792.1| hypothetical protein CLOBAR_00190 [Clostridium bartlettii DSM 16795] Length = 566 Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 119/219 (54%), Positives = 146/219 (66%), Gaps = 1/219 (0%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +P L+E P DAEI SH+LMLR GMI + + GIY+ LP+G + V IIREE N GA Sbjct: 2 LMPTLKEVPSDAEITSHQLMLRAGMIRKMASGIYNQLPMGIRVFRKVEDIIREEMNAKGA 61 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+S L A+LW ESGR+D G EM RL DRN + GPTHEE T I R+ I SY+ Sbjct: 62 QEISCALLVPAELWQESGRWDVMGPEMFRLKDRNGRDYCLGPTHEETFTHIVRNEITSYK 121 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP YQI+ KFRDE RPRFGVMR+R F MKDAYSFD EG SY+ MF +Y RIF Sbjct: 122 QLPLNLYQIETKFRDERRPRFGVMRTRNFTMKDAYSFDADQEGLDKSYDDMFDAYTRIFA 181 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 R L + P++A+SG +GG S EF+V ++ GE + VFCS Sbjct: 182 RCELDNSPVQADSGAMGGSASAEFMVKSEVGEDEIVFCS 220 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 73/166 (43%), Positives = 99/166 (59%), Gaps = 1/166 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+EVGHIF GTKYS M ATF +GK + MG YGIG R VAAVIE HD GII Sbjct: 397 RGVEVGHIFKLGTKYSESMGATFLDQNGKSQPIIMGCYGIGVERTVAAVIEQHHDENGII 456 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++AP+ + ++ + + + EKIY L G +V DD E+ G +F +DLLG Sbjct: 457 WPLAIAPYHVVVVPVNVKKEEHLENAEKIYKELEAAGVEVLLDDRNERAGFKFKDSDLLG 516 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 P+++ VG V D KVE K R +E +S++EV++ F+ N Sbjct: 517 IPMRITVGKDIV-DGKVEFKLRKEADKEIISVDEVLDRVKAEFAKN 561 >gi|77748729|ref|NP_643874.2| prolyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] gi|114152277|sp|Q8PGP9|SYP_XANAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 564 Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 115/218 (52%), Positives = 151/218 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE Sbjct: 181 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGE 218 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/153 (39%), Positives = 87/153 (56%), Gaps = 3/153 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +HD GI Sbjct: 402 ARGIEVGHVFQLGSQYAQALQATVIDEGGKAAVMKMGCYGIGISRIVAAAIEQNHDDAGI 461 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +AP++ + +IN K QV A + + +L G D DD G + G+ FA + Sbjct: 462 IWPAPMAPWQVVVCVINPKQDPQVL-AAAQALLDQLLAAGLDAALDDRGLRPGAMFADME 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 LLG P +V+V + ++ E + R E + Sbjct: 521 LLGIPHRVVVSERGLAAGTFEYRARTADAAESL 553 >gi|302036852|ref|YP_003797174.1| prolyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|190343267|gb|ACE75655.1| prolyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|300604916|emb|CBK41249.1| Prolyl-tRNA synthetase [Candidatus Nitrospira defluvii] Length = 543 Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 110/201 (54%), Positives = 147/201 (73%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR G+I + + GIY++LPLG + L + I+REE NR GA E+ +P A+LW E+GR Sbjct: 1 MLRAGLIRKVAAGIYTYLPLGLRVLRKIERIVREEMNRAGAQELLMPVASPAELWRETGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 +D YGKE+LR DR+++ GPTHEEV+TD+FR ++SYR +P FYQIQ KFRDE+RP Sbjct: 61 WDFYGKELLRFKDRHERDFCLGPTHEEVITDLFRREVRSYRQMPLNFYQIQTKFRDEIRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFG+MR REF+MKDAYSFD G++ +Y KM+ +Y RIF R GL P+ A++G IGG Sbjct: 121 RFGLMRGREFIMKDAYSFDRDEAGARLNYQKMYDAYNRIFTRCGLTFRPVEADTGLIGGT 180 Query: 206 LSHEFIVLADTGETQVFCSKD 226 SHEF+VLA+TGE + S+D Sbjct: 181 SSHEFMVLAETGEETIVYSED 201 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 71/182 (39%), Positives = 107/182 (58%), Gaps = 3/182 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N + DS P +A+GIEVGH+F GTKYS M ATF A G++ MG Y Sbjct: 356 ADLRNARAGDSSPRKDGTLKTAKGIEVGHVFMLGTKYSQAMKATFLDAQGQEQLAVMGCY 415 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R AA +E +HD KGI WP +APF ++L+ + + Q E +Y + + G Sbjct: 416 GIGVSRTAAASVEQNHDAKGIKWPVPIAPFHVTLLPL-SQSQPVTQLAETLYRAMQEAGI 474 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V WDD E+ G +F ADL+G P +++G K ++ +VE+K R TG + ++ ++V+ Sbjct: 475 EVLWDDRDERAGVKFNDADLIGAPYHLVIGEKGLAQGQVELKLRHTGETQKVAPDQVVAL 534 Query: 438 AS 439 S Sbjct: 535 LS 536 >gi|90413553|ref|ZP_01221544.1| prolyl-tRNA synthetase [Photobacterium profundum 3TCK] gi|90325485|gb|EAS41968.1| prolyl-tRNA synthetase [Photobacterium profundum 3TCK] Length = 571 Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 121/263 (46%), Positives = 164/263 (62%), Gaps = 10/263 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVEILMPVVQPFELWEETGRSEKMGPELLRFTDRHSRPFVLSPTAEEVVTSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EISSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE D + F S +D+ Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGE-------DLIAF---SSESDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVH 263 I + T P AAT ++ Sbjct: 231 ANIEKAEALAPTTEPAAATQEME 253 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 100/165 (60%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ G DGK ++MG YGIG RVVA+ IE ++D GII Sbjct: 407 RGIEVGHIFQLGTNYSEKMNCNVLGPDGKSVTLEMGCYGIGVSRVVASAIEQNYDENGII 466 Query: 340 WPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF+++++ + A + + A E +YA L+ G +V +DD E+ G F +L+ Sbjct: 467 WPTALAPFQVAIVPMNMAKSEEVKAAAESLYAELTAAGIEVLFDDRKERPGVMFKDIELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G++ + + ++E K R G + + + +V+ + + Sbjct: 527 GIPHTIVIGNRSLENGEMEYKDRRDGNKVAVPVTDVVEMIKQKLA 571 >gi|313896347|ref|ZP_07829900.1| proline--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] gi|312975146|gb|EFR40608.1| proline--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] Length = 570 Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 121/282 (42%), Positives = 173/282 (61%), Gaps = 6/282 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + P L+ P +AEIASH+LM R G+I + + G+Y++LPL + L + IIREE Sbjct: 1 MRATNLYAPTLRNTPAEAEIASHRLMYRAGLIRKSAGGMYTYLPLAWRTLRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P LQ A+LW ESGR+ +YG EM+R+ DR+++A GPTHEE++T + R Sbjct: 61 MDAAGGQEIMMPILQPAELWEESGRWGAYGAEMMRIQDRHERAFCLGPTHEEMITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFGVMRSREF+M+D YSFD EG SY KM+ + Sbjct: 121 ELRSYKQLPVMLYQIQDKFRDERRPRFGVMRSREFIMQDLYSFDKDVEGMHESYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F R GL + A+ G IGG S EF VLA GE+++ C D + E Sbjct: 181 YTNVFTRCGLNFRAVEADCGAIGGGRSEEFTVLAPEGESRIACC-DACSYAASDEKAQLR 239 Query: 241 DIISLNSI---VEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 + + + +E+ + P+ +T + E F +P K + A Sbjct: 240 PLDAPDEAELPLEKVSTPHTSTIALLAE--FLKIPVEKTIKA 279 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/160 (41%), Positives = 95/160 (59%), Gaps = 8/160 (5%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RGIE G IF GTKYS M A F DGK +QMG YGIG R +AA IE +HD GI Sbjct: 404 SRGIEAGQIFALGTKYSEAMQANFLDVDGKLKPLQMGCYGIGVGRTMAAAIEQNHDEHGI 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP ++AP+++ ++ + A + E+IY L G DV DD E+ G +F DL+ Sbjct: 464 IWPRAIAPYEVVVVAVNAKVEEQLAYAEEIYEELRAAGIDVLLDDRRERAGVKFNDCDLI 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 G+P+++ +G K + + +E+K R TG E++N+A Sbjct: 524 GYPVRIAIGPKTIENGSIEVKLRRTG--------ELVNFA 555 >gi|299823039|ref|ZP_07054925.1| proline--tRNA ligase [Listeria grayi DSM 20601] gi|299816568|gb|EFI83806.1| proline--tRNA ligase [Listeria grayi DSM 20601] Length = 566 Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 150/224 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DAE+ +H+L+LR G I Q + G+YS+LPL L N+ IIREE Sbjct: 1 MRQSMTFIPTLKEVPADAEVKNHQLLLRAGFIRQTASGVYSYLPLATLTLRNIERIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P LQ A+LW ESGR+ YG E++RL DRN++ GPTHEEV+T + R Sbjct: 61 LNKVGASEILMPALQPAELWEESGRWADYGPELMRLKDRNNRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 EIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHADLESLDKTYQDMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG IGG + EF+ L+ GE + S Sbjct: 181 YSNIFTRCGLDFRAVIADSGSIGGKETKEFMALSAIGEDTIAYS 224 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 95/158 (60%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M A F +G+ + + MG YGIG RV++A+ E + D G+ Sbjct: 403 AEGIEVGHIFKLGTKYSDAMKANFLDENGRANPIIMGCYGIGVSRVLSAIAEQNADENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +W ++PF + LI + ++ E++Y L + G V +DD E+ G +FA ADL+ Sbjct: 463 VWDREISPFDLHLIPVNMKNEEQASFAEELYVSLQESGFTVLFDDRAERAGVKFADADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P+++ VG K + VE+K R TG ++ EE++N Sbjct: 523 GLPIRITVGKK-ADEGIVEVKIRKTGEMIEVKKEELLN 559 >gi|320104617|ref|YP_004180208.1| prolyl-tRNA synthetase [Isosphaera pallida ATCC 43644] gi|319751899|gb|ADV63659.1| prolyl-tRNA synthetase [Isosphaera pallida ATCC 43644] Length = 595 Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 115/222 (51%), Positives = 150/222 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK +P L+E P A SH+L+L+ GMI Q G Y++LPLG + L+ + AI+R+ Sbjct: 1 MRWSKALIPTLKEAPAGAVAPSHQLLLKAGMIRQLGSGAYTYLPLGWRVLNKIVAIVRKG 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA EM +P LQ +LW E+GRY ++G +++L D+ M GPTHEEV+TD+ R Sbjct: 61 MDDAGAQEMLMPALQPVELWKETGRYQTFGDLLMQLKVGGDQTMALGPTHEEVVTDLARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP T YQIQ KFRDE RPRFGV+R+REFLMKDAYSFD + SY+ M+ + Sbjct: 121 LIKSYRQLPMTLYQIQTKFRDEPRPRFGVLRTREFLMKDAYSFDANLDQLNQSYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 Y RIF G+ + + AESGPIGGD SHEF+V A GE + Sbjct: 181 YQRIFDECGIPYVVVEAESGPIGGDSSHEFMVPASIGEDVIL 222 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 101/181 (55%), Gaps = 2/181 (1%) Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSA 300 + L +V P +D+ N D P + + + RGIEVGH+F GTKYS M A Sbjct: 370 LHLTGVVPGRDFPLDRVADLRNAVAGDPCPLSGQPMIETRGIEVGHVFKLGTKYSKAMGA 429 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 TF G + MG YGIG R++AA +E+ HD GI+WP ++AP+++ LI +K + Sbjct: 430 TFLDETGTAQDIIMGCYGIGINRILAAAVEALHDAHGIVWPLAIAPYEVILIPLKVSNPD 489 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 E + L+ G DV DD Q G +F ADL+G PL+V++G + + + K+E+K Sbjct: 490 LMAVVETLERELAAAGIDVLTDDRDHQPGFKFKDADLIGIPLRVVIGERGLKEGKLELKW 549 Query: 421 R 421 R Sbjct: 550 R 550 >gi|269217138|ref|ZP_06160992.1| proline--tRNA ligase [Slackia exigua ATCC 700122] gi|269129275|gb|EEZ60360.1| proline--tRNA ligase [Slackia exigua ATCC 700122] Length = 569 Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 113/222 (50%), Positives = 164/222 (73%), Gaps = 2/222 (0%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ ++P ++E+P DA++ S KL+ R GM+ + + G+YS+LPLG + L+ + +IIREE + Sbjct: 2 SELYMPTIKEDPADADVTSAKLLYRAGMLRKEASGLYSFLPLGMRVLNKLESIIREEMDS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ +P +QS+DLW ESGR+ +YG+EMLR+ADR+ GPTHEEV+TD+ ++ ++ Sbjct: 62 HGAQEILMPFVQSSDLWRESGRWGAYGEEMLRMADRHGNEFCLGPTHEEVVTDLVKNELR 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP YQIQLKFRDE RPRFG++RSREF+MKDAYSFD EG SY +M +Y Sbjct: 122 SYKDLPRNLYQIQLKFRDERRPRFGLLRSREFIMKDAYSFDADREGLDASYERMREAYEN 181 Query: 184 IFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGETQ-VFC 223 + R+GL+ + A++G IGGD + EF+VLAD GE + V+C Sbjct: 182 VCDRMGLEYRVVVADAGQIGGDGGTEEFMVLADNGEAELVYC 223 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/166 (40%), Positives = 99/166 (59%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIEVG IF G KYS M ATF ADG + MG YGIG R +AA +E +D G Sbjct: 404 SARGIEVGQIFKLGDKYSRAMGATFMDADGSEKPFIMGCYGIGVSRAMAAAVEQRNDEHG 463 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP ++AP +++I + A E++ L+ G +V DD E+ G +F DL Sbjct: 464 IIWPAAIAPAHVAVIPLSPKPDEVTAAAEELAGALADAGLEVVIDDRDERAGVKFNDNDL 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +G+P+QV+VG + + + VE+K R TG +E ++L++V++ S Sbjct: 524 IGWPVQVVVGKRGLKEGVVEVKDRATGEKESVALDQVLSAVERVLS 569 >gi|149190039|ref|ZP_01868316.1| prolyl-tRNA synthetase [Vibrio shilonii AK1] gi|148836069|gb|EDL53029.1| prolyl-tRNA synthetase [Vibrio shilonii AK1] Length = 571 Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 120/277 (43%), Positives = 167/277 (60%), Gaps = 18/277 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGAELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-------------- 226 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + S + Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSSESDYAANIEKAEAVA 240 Query: 227 -FMDFPIPSEN---TDFDDIISLNSIVEQWTAPYAAT 259 MD P++ D + ++ +VEQ+ P T Sbjct: 241 PAMDLAAPTQEMTLVDTPNAKTIAELVEQFDLPIEKT 277 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 107/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK+ ++MG YGIG RVVA+ IE ++D GII Sbjct: 407 RGIEVGHIFQLGKNYSEKMNCGVLGPDGKNTILEMGCYGIGVSRVVASAIEQNNDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVKEAAEKLYAELTAAGIEVLFDDRKERPGVMFSDIELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R TG + +++E+++ + + + + Sbjct: 527 GIPHTIVIGDRSMDEGNFEYKNRRTGDKTPVAMEQIVAHVTSQLA 571 >gi|319892279|ref|YP_004149154.1| Prolyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317161975|gb|ADV05518.1| Prolyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] Length = 567 Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 108/226 (47%), Positives = 157/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P +AE SH+L+L+ G+I Q++ G+YS+LP+ + + ++ IIR+E Sbjct: 1 MKQSKVFIPTLREVPAEAEAISHQLLLKAGLIKQNAAGVYSYLPVATRVIHKISDIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R A+E+ +P LQ ++LW ESGR+D+YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MERIDAVEVVMPVLQQSELWKESGRWDAYGMELMRLRDRNQREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 ELRSYKQLPLTLFQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHTDEESLMETYQNMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R+GL P+ A+SG IGG+ +HEF L+ GE + S + Sbjct: 181 YSTIFKRVGLNVRPVVADSGAIGGNHTHEFHALSAIGEDTIVYSNN 226 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/160 (41%), Positives = 97/160 (60%), Gaps = 4/160 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F G KYS M AT G++ + MG YGIG R ++A+IE HD GI Sbjct: 403 AEGIEVGQVFVLGEKYSEAMKATVLNQQGREQNLTMGCYGIGVSRTLSAIIEQHHDDNGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC-DVFWDDMGEQIGSQFAVADL 397 IWP SV PF + LI++ R +++Y +L +G DV +DD E+ G +F ADL Sbjct: 463 IWPKSVTPFDVHLISVNPKKDEQRACADRLYDQL--LGTYDVLYDDRNERAGVKFNDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +G P++V+VG K S+ VE+K R TG ED+ + +++ + Sbjct: 521 IGIPVRVVVG-KNASEGIVEVKRRDTGDSEDVHVNDLVTH 559 >gi|139439769|ref|ZP_01773160.1| Hypothetical protein COLAER_02191 [Collinsella aerofaciens ATCC 25986] gi|133774919|gb|EBA38739.1| Hypothetical protein COLAER_02191 [Collinsella aerofaciens ATCC 25986] Length = 573 Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 157/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+E+P DAE+ASH+L+LR GMI + + G+YS+LPL +++ + I+R+E Sbjct: 5 MYMSKLYAPTLKEDPADAELASHRLLLRAGMIRKEAAGLYSYLPLAWRSIRKIENIVRDE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + A+LW ESGR D+YGKE++R DR+ + + GPTHEE +T + R+ Sbjct: 65 MDAAGAQELMMPIMVDAELWRESGRIDAYGKELVRFDDRHGREFVLGPTHEETVTALVRN 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP Y IQ KFRDE RPRFG+MR REF+MKDAYSF T E + Y+KM + Sbjct: 125 ELRSYKQLPVNLYHIQDKFRDEFRPRFGLMRGREFIMKDAYSFSATQESLQEEYDKMKQA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y I R +K++P+ A+SG IGGD S E++ LAD GE V+C + Sbjct: 185 YANICERCYIKALPVVADSGEIGGDTSVEYMALADAGEASLVYCDE 230 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 71/158 (44%), Positives = 103/158 (65%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIEV +F GTKYS M ATF DGK+ + MG YG+G R +AAV+E +D G Sbjct: 404 AARGIEVSQVFQLGTKYSEAMGATFMDEDGKEKPLIMGCYGVGVSRSLAAVVEQHNDEHG 463 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I+WP SVAP+++++I + + C CE+I L G +V DD E+ G +FA DL Sbjct: 464 IVWPVSVAPYEVAVIPLDPKKEECATVCEQIVDGLCAEGIEVVVDDRDERPGFKFADNDL 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +GFP QV++G + + + VE+K R TG RED++++EV+ Sbjct: 524 MGFPYQVVLGKRGLKNGTVELKDRATGEREDVAIDEVV 561 >gi|21109942|gb|AAM38410.1| prolyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] Length = 583 Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 115/218 (52%), Positives = 151/218 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 20 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 79 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 80 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 139 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 140 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 199 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE Sbjct: 200 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGE 237 Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 3/164 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +HD GI Sbjct: 421 ARGIEVGHVFQLGSQYAQALQATVIDEGGKAAVMKMGCYGIGISRIVAAAIEQNHDDAGI 480 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +AP++ + +IN K QV A + + +L G D DD G + G+ FA + Sbjct: 481 IWPAPMAPWQVVVCVINPKQDPQVL-AAAQALLDQLLAAGLDAALDDRGLRPGAMFADME 539 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 LLG P +V+V + ++ E + R E + + + H Sbjct: 540 LLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAGLFSRLGH 583 >gi|222151097|ref|YP_002560251.1| proline-tRNA ligase [Macrococcus caseolyticus JCSC5402] gi|254782906|sp|B9EBE4|SYP_MACCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|222120220|dbj|BAH17555.1| proline-tRNA ligase [Macrococcus caseolyticus JCSC5402] Length = 568 Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 109/230 (47%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DA+ SH+L+L+ GMI Q + G+YS+LP+ ++ L+ + +I+REE Sbjct: 1 MKQSKMFIPTLREVPSDADSKSHQLLLKAGMIKQVASGVYSYLPIAKRVLNKIESIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +E+ +P LQ ++LW ESGR+ SYG E++R+ DR+ + GPTHEE++T + R Sbjct: 61 MEAIDGVEILMPALQPSELWSESGRWQSYGAELMRMTDRHGREFALGPTHEEIITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF T +Y M+ + Sbjct: 121 ELKSYKKLPVTLFQIQNKFRDEKRPRFGLLRGREFIMKDAYSFHATEASLDETYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y +IF RL L+ P+ A+SG IGG +HEF+ LA+ GE + C D D+ Sbjct: 181 YSKIFSRLNLQFRPVIADSGAIGGSHTHEFMALAEIGEDTI-CYTDGSDY 229 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 94/146 (64%), Gaps = 2/146 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIE+G +F GTKYS M+ATF G+ + MG YGIG R ++AVIE +D KGI Sbjct: 402 AEGIEIGQVFKLGTKYSESMNATFLNDQGRAEPMIMGCYGIGVSRTLSAVIEQHNDDKGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP ++ P+++ +I++ +V ++ +++Y + +V +DD E+ G +F ADL+ Sbjct: 462 IWPTAITPYEVHIISVNPKQEVQKNLADQLYDTY-RTQYEVLYDDRAERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G P++V+VG K +D VE+K+R TG Sbjct: 521 GIPVRVVVG-KQAADGIVEVKNRRTG 545 >gi|290893569|ref|ZP_06556552.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|290556914|gb|EFD90445.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] Length = 568 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 119/235 (50%), Positives = 154/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 97/173 (56%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 403 AEGIEVGHIFKLGTKYSQAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L G V DD E+ G +FA AD Sbjct: 463 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYTSLQGAGFSVLIDDRAERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGVVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|78037678|emb|CAJ25423.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 621 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 115/218 (52%), Positives = 151/218 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 58 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 117 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 118 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 177 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 178 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 237 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE Sbjct: 238 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGE 275 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 3/164 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +HD GI Sbjct: 459 ARGIEVGHVFQLGSQYAQALQATVIDEGGKAAVMKMGCYGIGISRIVAAAIEQNHDDAGI 518 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +AP++ + +IN K QV A + + +L G D DD G + G+ FA + Sbjct: 519 IWPAPMAPWQVVVCVINPKQDPQVL-AAAQALLDQLLAAGLDAALDDRGLRPGAMFADME 577 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 LLG P +V+V + ++ E + R E + + + H Sbjct: 578 LLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAALFSRLGH 621 >gi|217964534|ref|YP_002350212.1| prolyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|254782905|sp|B8DG08|SYP_LISMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|217333804|gb|ACK39598.1| prolyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|307570900|emb|CAR84079.1| proS [Listeria monocytogenes L99] Length = 568 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 119/235 (50%), Positives = 154/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 97/173 (56%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 403 AEGIEVGHIFKLGTKYSQAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L G V DD E+ G +FA AD Sbjct: 463 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYTSLQGAGFSVLIDDRAERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGVVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|320120274|gb|EFE27922.2| proline--tRNA ligase [Filifactor alocis ATCC 35896] Length = 596 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 112/248 (45%), Positives = 167/248 (67%), Gaps = 10/248 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ +LP L+E P DAE+ SH+L+LR G+I + G+YS+LPLG++ L + +IREE Sbjct: 24 MKMSRMYLPTLREVPSDAEVISHQLLLRAGLIRKLVSGVYSYLPLGKRVLAKIERVIREE 83 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ + +Q ++LW ESGR++++G EM RL DRN++ GPTHEE+ T + R Sbjct: 84 MDAANSQEVLMSAIQPSELWKESGRWENFGPEMFRLYDRNEREFCLGPTHEEIFTSLVRD 143 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP + YQIQ K+RDE RPRFGV+R+REF+MKDAY+FD P+G K SY +M+ + Sbjct: 144 ELKSYKQLPLSLYQIQTKYRDEKRPRFGVIRAREFIMKDAYTFDRDPDGMKQSYQEMWEA 203 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF----CSKDFMD------F 230 Y +IF RL +K + +SG +GG SHEF +A++GE+ V C D F Sbjct: 204 YTKIFDRLHMKYRVVEGDSGAMGGSDSHEFTAMAESGESTVMYAEGCDYAATDEKAECIF 263 Query: 231 PIPSENTD 238 +P ++T+ Sbjct: 264 ELPVQDTE 271 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 72/180 (40%), Positives = 110/180 (61%), Gaps = 8/180 (4%) Query: 269 DSLPENKRV---SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 D P+++R+ S RGIEVG+IF GTKYS ++ T+ DGK V MGS+GIG R + Sbjct: 416 DICPQDRRLRLKSDRGIEVGNIFQLGTKYSDSLNLTYLDQDGKSKKVWMGSHGIGVSRTM 475 Query: 326 AAVIESSHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 AA+IE ++D KGIIWP VAP+ I+++N K DQ+ E++Y +K+G +V +DD Sbjct: 476 AAIIEQNYDEKGIIWPLVVAPYHILITVVNAKKEDQM--QLGEQLYQEYTKLGYEVLFDD 533 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E+ G +F ADL+G P+++ VG + + VE R G +E++ + E+ F+ Sbjct: 534 RNERAGVKFNDADLIGIPIRINVGRR-AEEGIVEFSLRRGGEKEEIPVSEIAQKVKDEFA 592 >gi|254932366|ref|ZP_05265725.1| prolyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293583922|gb|EFF95954.1| prolyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|328475041|gb|EGF45829.1| prolyl-tRNA synthetase [Listeria monocytogenes 220] gi|332311762|gb|EGJ24857.1| Prolyl-tRNA synthetase [Listeria monocytogenes str. Scott A] Length = 568 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 119/235 (50%), Positives = 154/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 98/173 (56%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 403 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y+ L G V DD E+ G +FA AD Sbjct: 463 VWDKQISPFDLHLIPVNVKSEEQVA--FAETLYSSLQDAGFSVLIDDRAERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGVVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|294664482|ref|ZP_06729831.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605740|gb|EFF49042.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 621 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 115/218 (52%), Positives = 151/218 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 58 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 117 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 118 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 177 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 178 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 237 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE Sbjct: 238 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGE 275 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 3/164 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +HD GI Sbjct: 459 ARGIEVGHVFQLGSQYAQALQATVIDEGGKAAVMKMGCYGIGISRIVAAAIEQNHDDAGI 518 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +AP++ + +IN K QV A + + +L G D DD G + G+ FA + Sbjct: 519 IWPAPMAPWQVVVCVINPKQDPQVL-AAAQALLDQLLAAGLDAALDDRGLRPGAMFADME 577 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 LLG P +V+V + ++ E + R E + + + H Sbjct: 578 LLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAGLFSRLGH 621 >gi|46907545|ref|YP_013934.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47093943|ref|ZP_00231680.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|254824622|ref|ZP_05229623.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|254852630|ref|ZP_05241978.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|255522074|ref|ZP_05389311.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-175] gi|300765441|ref|ZP_07075423.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|81830231|sp|Q720A3|SYP_LISMF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|46880813|gb|AAT04111.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47017681|gb|EAL08477.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|258605946|gb|EEW18554.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|293593860|gb|EFG01621.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|300513878|gb|EFK40943.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|328468602|gb|EGF39602.1| prolyl-tRNA synthetase [Listeria monocytogenes 1816] Length = 568 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 119/235 (50%), Positives = 154/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 98/173 (56%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 403 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y+ L G V DD E+ G +FA AD Sbjct: 463 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYSSLQDAGFSVLIDDRAERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGVVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|294625222|ref|ZP_06703863.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600496|gb|EFF44592.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 621 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 115/218 (52%), Positives = 151/218 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 58 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 117 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 118 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 177 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 178 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 237 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE Sbjct: 238 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGE 275 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 3/164 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +HD GI Sbjct: 459 ARGIEVGHVFQLGSQYAQALQATVIDEGGKAAVMKMGCYGIGISRIVAAAIEQNHDDAGI 518 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +AP++ + +IN K QV A + + +L G D DD G + G+ FA + Sbjct: 519 IWPAPMAPWQVVVCVINPKQDPQVL-AAAQALLDQLLAAGLDAALDDRGLRPGAMFADME 577 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 LLG P +V+V + ++ E + R E + + + H Sbjct: 578 LLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAGLFSRLGH 621 >gi|226223920|ref|YP_002758027.1| prolyl-tRNA synthetase [Listeria monocytogenes Clip81459] gi|259511604|sp|C1L2M5|SYP_LISMC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225876382|emb|CAS05091.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 568 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 119/235 (50%), Positives = 154/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 98/173 (56%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 403 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y+ L G V DD E+ G +FA AD Sbjct: 463 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYSSLQDAGFSVLIDDRAERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGVVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|71064999|ref|YP_263726.1| prolyl-tRNA synthetase [Psychrobacter arcticus 273-4] gi|114152234|sp|Q4FUL6|SYP_PSYA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71037984|gb|AAZ18292.1| prolyl-tRNA synthetase, class IIa [Psychrobacter arcticus 273-4] Length = 572 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 117/276 (42%), Positives = 170/276 (61%), Gaps = 17/276 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LM+R G+I + + G+Y WLP+G + L V I+REE Sbjct: 1 MKASQFLFATLKETPSDADIASSQLMVRAGLIRKIASGLYIWLPMGLRVLQKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P Q A+LW +GR++ YG E+LR DR+D+ + GPTHEEV+T++ + Sbjct: 61 MQNIGAQEVLMPMTQPAELWQMTGRFNDYGPELLRFKDRHDRDFVLGPTHEEVITNLAQG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP TF+QIQ KFRDE+RPRFGVMR+REF MKDAYSF + +Y+ M+ + Sbjct: 121 ELRSYKQLPITFFQIQNKFRDEIRPRFGVMRAREFTMKDAYSFHVDQASLAKTYDDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-----------------FC 223 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + C Sbjct: 181 YTRIFTRLGLDFRAVQADTGSIGGFASHEFHVLADSGEDDIAFSDSSEYAANVELAESVC 240 Query: 224 SKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 + + + EN D ++ + ++ E A T Sbjct: 241 TAERQPATMARENVDTVNMPTCEAVAEYLNVELATT 276 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 107/189 (56%), Gaps = 8/189 (4%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K RGIEVGHIF G KYS M+ T G DGK + MG YG Sbjct: 384 DIRNVNQGDPSPDGKGTLQIKRGIEVGHIFQLGNKYSQAMNCTVSGDDGKPVTLMMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWP------DSVAPFKISLINIKAHDQVCRDACEKIYARL 372 IG R++AA IE ++D GI+WP DS+APF+++++ +K+ ++ +Y L Sbjct: 444 IGVSRIIAAAIEQNNDENGIMWPLTPNISDSLAPFEVAIVPMKSKEETVMQTATALYDEL 503 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +G +V DD E+ G +FA +L+G P +++V + +++ K E +R ++ +S + Sbjct: 504 KALGVNVLLDDRNERPGVKFADLELIGIPHRIVVSDRNLAEDKYEYINRRDTEKQLLSRD 563 Query: 433 EVINYASHR 441 EV+ S + Sbjct: 564 EVLAKVSSK 572 >gi|323464624|gb|ADX76777.1| prolyl-tRNA synthetase [Staphylococcus pseudintermedius ED99] Length = 567 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 108/226 (47%), Positives = 157/226 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P +AE SH+L+L+ G+I Q++ G+YS+LP+ + + ++ IIR+E Sbjct: 1 MKQSKVFIPTLREVPAEAEAISHQLLLKAGLIKQNAAGVYSYLPVATRVIHKISDIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R A+E+ +P LQ ++LW ESGR+D+YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MERIDAVEVVMPVLQQSELWKESGRWDAYGMELMRLRDRNQREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 ELRSYKQLPLTLFQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHTDEESLMETYQNMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R+GL P+ A+SG IGG+ +HEF L+ GE + S + Sbjct: 181 YSTIFKRVGLNVRPVVADSGAIGGNHTHEFHALSAIGEDTIVYSDN 226 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 67/160 (41%), Positives = 97/160 (60%), Gaps = 4/160 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F G KYS M AT G++ + MG YGIG R ++A+IE HD GI Sbjct: 403 AEGIEVGQVFVLGEKYSEAMKATVLNQQGREQNLTMGCYGIGVSRTLSAIIEQHHDDNGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC-DVFWDDMGEQIGSQFAVADL 397 IWP SV PF + LI++ R +++Y +L +G DV +DD E+ G +F ADL Sbjct: 463 IWPKSVTPFDVHLISVNPKKDEQRACADRLYDQL--LGTYDVLYDDRNERAGVKFNDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +G P++V+VG K S+ VE+K R TG ED+ + +++ + Sbjct: 521 IGIPVRVVVG-KNASEGIVEVKRRDTGDSEDVHVNDLVTH 559 >gi|294783936|ref|ZP_06749258.1| proline--tRNA ligase [Fusobacterium sp. 1_1_41FAA] gi|294479748|gb|EFG27527.1| proline--tRNA ligase [Fusobacterium sp. 1_1_41FAA] Length = 567 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 153/224 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEI SHKLMLR MI + + GIY++LPLG + + + IIREE Sbjct: 1 MRFSKAYIKTLKETPKEAEIVSHKLMLRAAMIKKLASGIYAYLPLGYRTIRKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGAEMLRLKDRHERDFVLSPTQEEMITSIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKD YSF + E + M + Sbjct: 121 DISSYKSLPLNLYHIQTKFRDERRPRFGLMRGREFTMKDGYSFHTSQESLDEEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYS 224 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/160 (48%), Positives = 98/160 (61%), Gaps = 5/160 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE G IF G KYS M+AT+ +GK Y+ MG YGIG R +AA IE ++D G Sbjct: 401 SARGIECGQIFKLGDKYSKAMNATYLDENGKTQYMLMGCYGIGVTRTMAAAIEQNNDENG 460 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP S+AP+ + +I NIK QV EKIY L DV DD E+ G +F A Sbjct: 461 IIWPVSIAPYIVDVIPANIKNEGQVS--LAEKIYNELQAEDIDVMLDDRDEKPGFKFKDA 518 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DL+GFP +V+VG K V + VE+K R TG ++S EV+ Sbjct: 519 DLIGFPFKVVVG-KRVDEGIVEVKIRRTGETLEVSESEVV 557 >gi|224499901|ref|ZP_03668250.1| prolyl-tRNA synthetase [Listeria monocytogenes Finland 1988] Length = 568 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 119/235 (50%), Positives = 154/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 97/173 (56%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 403 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L G V DD E+ G +FA AD Sbjct: 463 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYTSLQDAGFSVLIDDRAERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGVVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|16803359|ref|NP_464844.1| prolyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|224501738|ref|ZP_03670045.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|81849855|sp|Q8Y7G2|SYP_LISMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|16410735|emb|CAC99397.1| prolyl-tRNA synthetase [Listeria monocytogenes EGD-e] Length = 568 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 119/235 (50%), Positives = 154/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 97/173 (56%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 403 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L G V DD E+ G +FA AD Sbjct: 463 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYTSLQDAGFSVLIDDRAERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGVVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|254828679|ref|ZP_05233366.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|254829924|ref|ZP_05234579.1| prolyl-tRNA synthetase [Listeria monocytogenes 10403S] gi|254898516|ref|ZP_05258440.1| prolyl-tRNA synthetase [Listeria monocytogenes J0161] gi|254911993|ref|ZP_05262005.1| prolyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254936320|ref|ZP_05268017.1| prolyl-tRNA synthetase [Listeria monocytogenes F6900] gi|284801704|ref|YP_003413569.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284994846|ref|YP_003416614.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|258601083|gb|EEW14408.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258608910|gb|EEW21518.1| prolyl-tRNA synthetase [Listeria monocytogenes F6900] gi|284057266|gb|ADB68207.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284060313|gb|ADB71252.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|293589957|gb|EFF98291.1| prolyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 568 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 119/235 (50%), Positives = 154/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 97/173 (56%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 403 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L G V DD E+ G +FA AD Sbjct: 463 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYTSLQDAGFSVLIDDRAERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGVVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|71274618|ref|ZP_00650906.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Dixon] gi|170730883|ref|YP_001776316.1| prolyl-tRNA synthetase [Xylella fastidiosa M12] gi|226701359|sp|B0U4A7|SYP_XYLFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71164350|gb|EAO14064.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Dixon] gi|167965676|gb|ACA12686.1| Proline--tRNA ligase [Xylella fastidiosa M12] Length = 564 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 113/218 (51%), Positives = 150/218 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+R+E Sbjct: 1 MRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM +PT+Q +LW ES R++ +G ++L++ DR Y PT EE +TD R Sbjct: 61 MNRAGAVEMLLPTIQPRELWEESERWEKFGSQLLKIKDRKQAEYCYSPTAEEAVTDYVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ Y M + Sbjct: 121 ELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLSDADLVREYENMRAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE Sbjct: 181 YTRIFTRLGLEFRSVQADSGAIGGDASQEFHVIADSGE 218 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/152 (39%), Positives = 85/152 (55%), Gaps = 1/152 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G KY+ M AT GK + MG YGIG R+VAA IE +HD GI Sbjct: 402 ARGIEVGHVFQLGRKYAEAMKATVLDEYGKAVTMTMGCYGIGVSRIVAAAIEQNHDVAGI 461 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWP +AP+++++ I D V A E + A L D DD G + G FA +L Sbjct: 462 IWPAPIAPWQVAVCVINPKKDPVIIAAAELLLAELQSADVDTVLDDRGLRPGVMFADMEL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +G P +++V + ++ E + R T + E++ Sbjct: 522 IGIPHRIVVSERGLAAGTYEYRARRTAMVENL 553 >gi|308233721|ref|ZP_07664458.1| prolyl-tRNA synthetase [Atopobium vaginae DSM 15829] Length = 575 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 115/235 (48%), Positives = 157/235 (66%), Gaps = 3/235 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK + P L+E+P DA+IASHKL++R GMI + + G+YS+LPL +++ + +IIREE Sbjct: 6 RMSKLYAPTLKEDPTDADIASHKLLVRAGMIRKAAAGLYSYLPLAWRSIQKIESIIREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 A EM P L A+LW +SGR+ +YG E++RL DR+D GPTHEE TD+ R+ Sbjct: 66 EAIDAQEMLAPILTDAELWHQSGRWGAYGPELMRLTDRHDHEYALGPTHEETFTDLIRNE 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +KSY++LP T Y IQ KFRDE RPRFG+MR REF+MKD YSF E Y + +Y Sbjct: 126 LKSYKDLPVTLYHIQDKFRDERRPRFGLMRGREFIMKDGYSFCANQESLHECYEQEKDAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSE 235 I R GL+++P+ A+SG IGGD S EF+ LAD GE + ++C D D+ +E Sbjct: 186 ATIARRCGLRAVPVVADSGQIGGDTSVEFMALADAGEAELIYC--DACDYAADTE 238 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 75/169 (44%), Positives = 107/169 (63%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE+ +F GTKYS M ATF DG + MG YGIG R +AAV+E SHD G Sbjct: 402 SARGIEISQVFQLGTKYSKAMGATFMDEDGTEKPFIMGCYGIGVSRTLAAVVEQSHDEHG 461 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP SVAP+++++I + HD+ +++ L K G +V DD GE+ G +F ADL Sbjct: 462 IIWPVSVAPYEVAVIPLDVHDETVWPVAQRLAEGLIKAGIEVIVDDRGERPGIKFNDADL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +GFP QV+ G K ++ + VE+K+R TG R ++ ++EV+++ H R Sbjct: 522 MGFPYQVVCGKKALAHACVEVKNRATGERTEVPVDEVVDHLVHEIVPQR 570 >gi|77747502|ref|NP_297735.2| prolyl-tRNA synthetase [Xylella fastidiosa 9a5c] gi|114152281|sp|Q9PG57|SYP_XYLFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 564 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 113/218 (51%), Positives = 149/218 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+R+E Sbjct: 1 MRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM +PT+Q +LW ES R++ +G ++L++ DR Y PT EE +TD R Sbjct: 61 MNRAGAVEMLLPTIQPRELWEESERWEKFGNQLLKIKDRKQAEYCYSPTAEEAVTDYVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L Y M + Sbjct: 121 ELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLNDADLVREYENMRAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE Sbjct: 181 YTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIADSGE 218 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 61/152 (40%), Positives = 86/152 (56%), Gaps = 1/152 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G KY+ M AT GK + MG YGIG R+VAA IE +HD GI Sbjct: 402 ARGIEVGHVFQLGRKYAEAMKATVLDEYGKAVTMTMGCYGIGVSRIVAAAIEQNHDVAGI 461 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWP S+AP+++++ I D V A E + A L D DD G + G FA +L Sbjct: 462 IWPASIAPWQVAVCVINPKKDPVITAAAEVLLAELQSADVDTVLDDRGLRPGVMFADMEL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +G P +++V + ++ E + R T + E++ Sbjct: 522 IGIPHRIVVSERGLAAGTYEYRARHTAMVENL 553 >gi|328944057|ref|ZP_08241522.1| proline--tRNA ligase [Atopobium vaginae DSM 15829] gi|327492026|gb|EGF23800.1| proline--tRNA ligase [Atopobium vaginae DSM 15829] Length = 616 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 115/235 (48%), Positives = 157/235 (66%), Gaps = 3/235 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK + P L+E+P DA+IASHKL++R GMI + + G+YS+LPL +++ + +IIREE Sbjct: 47 RMSKLYAPTLKEDPTDADIASHKLLVRAGMIRKAAAGLYSYLPLAWRSIQKIESIIREEM 106 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 A EM P L A+LW +SGR+ +YG E++RL DR+D GPTHEE TD+ R+ Sbjct: 107 EAIDAQEMLAPILTDAELWHQSGRWGAYGPELMRLTDRHDHEYALGPTHEETFTDLIRNE 166 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +KSY++LP T Y IQ KFRDE RPRFG+MR REF+MKD YSF E Y + +Y Sbjct: 167 LKSYKDLPVTLYHIQDKFRDERRPRFGLMRGREFIMKDGYSFCANQESLHECYEQEKDAY 226 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSE 235 I R GL+++P+ A+SG IGGD S EF+ LAD GE + ++C D D+ +E Sbjct: 227 ATIARRCGLRAVPVVADSGQIGGDTSVEFMALADAGEAELIYC--DACDYAADTE 279 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 75/169 (44%), Positives = 107/169 (63%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE+ +F GTKYS M ATF DG + MG YGIG R +AAV+E SHD G Sbjct: 443 SARGIEISQVFQLGTKYSKAMGATFMDEDGTEKPFIMGCYGIGVSRTLAAVVEQSHDEHG 502 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP SVAP+++++I + HD+ +++ L K G +V DD GE+ G +F ADL Sbjct: 503 IIWPVSVAPYEVAVIPLDVHDETVWPVAQRLAEGLIKAGIEVIVDDRGERPGIKFNDADL 562 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +GFP QV+ G K ++ + VE+K+R TG R ++ ++EV+++ H R Sbjct: 563 MGFPYQVVCGKKALAHACVEVKNRATGERTEVPVDEVVDHLVHEIVPQR 611 >gi|28199512|ref|NP_779826.1| prolyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182682245|ref|YP_001830405.1| prolyl-tRNA synthetase [Xylella fastidiosa M23] gi|81839496|sp|Q87B25|SYP_XYLFT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701358|sp|B2I7W6|SYP_XYLF2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|28057627|gb|AAO29475.1| prolyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182632355|gb|ACB93131.1| prolyl-tRNA synthetase [Xylella fastidiosa M23] gi|307578519|gb|ADN62488.1| prolyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 564 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 113/218 (51%), Positives = 149/218 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+R+E Sbjct: 1 MRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM +PT+Q +LW ES R++ +G ++L++ DR Y PT EE +TD R Sbjct: 61 MNRAGAVEMLLPTIQPRELWEESERWEKFGSQLLKIKDRKQAEYCYSPTAEEAVTDYVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L Y M + Sbjct: 121 ELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLNDADLVREYENMRAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE Sbjct: 181 YTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIADSGE 218 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 60/152 (39%), Positives = 85/152 (55%), Gaps = 1/152 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G KY+ M AT GK + MG YGIG R+VAA IE +HD GI Sbjct: 402 ARGIEVGHVFQLGRKYAEAMKATVLDEYGKAVTMTMGCYGIGVSRIVAAAIEQNHDVAGI 461 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWP +AP+++++ I D V A E + A L D DD G + G FA +L Sbjct: 462 IWPAPIAPWQVAVCVINPKKDPVITAAAEMLLAELQSADVDTVLDDRGLRPGVMFADMEL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +G P +++V + ++ E + R T + E++ Sbjct: 522 IGIPHRIVVSERGLAAGTYEYRARRTAMVENL 553 >gi|172087674|ref|YP_204065.3| prolyl-tRNA synthetase [Vibrio fischeri ES114] gi|59479390|gb|AAW85177.1| prolyl-tRNA synthetase [Vibrio fischeri ES114] Length = 575 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 5 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRRLASGLYTWLPTGLRVLRKVENIVRQE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 65 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 125 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDINKEGLQKSYDAMHDA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 185 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 230 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 102/165 (61%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ A+GK+ ++MG YGIG RVVA+ IE ++D GI+ Sbjct: 411 RGIEVGHIFQLGTAYSEAMNCGVLDANGKNVILEMGCYGIGVSRVVASAIEQNNDEYGIV 470 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP+++APF ++++ + H + ++A EK+YA L+ +G +V +DD E+ G F +L+ Sbjct: 471 WPEAIAPFTVAIVPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFKDIELI 530 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R +E + + ++ + + S Sbjct: 531 GIPHTIVIGDRSMDEGHFEYKNRRANTKEAVEMANIVEHIKAQLS 575 >gi|47096944|ref|ZP_00234521.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|47014704|gb|EAL05660.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] Length = 502 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 119/235 (50%), Positives = 154/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 4/100 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 403 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVG 376 +W ++PF + LI N+K+ +QV E +Y L G Sbjct: 463 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYTSLQDAG 500 >gi|255030222|ref|ZP_05302173.1| prolyl-tRNA synthetase [Listeria monocytogenes LO28] Length = 505 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 119/235 (50%), Positives = 154/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 4/104 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 403 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVF 380 +W ++PF + LI N+K+ +QV E +Y L G V Sbjct: 463 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYTSLQDAGFSVL 504 >gi|114152276|sp|Q5E719|SYP_VIBF1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 571 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRRLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDINKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 102/165 (61%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ A+GK+ ++MG YGIG RVVA+ IE ++D GI+ Sbjct: 407 RGIEVGHIFQLGTAYSEAMNCGVLDANGKNVILEMGCYGIGVSRVVASAIEQNNDEYGIV 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP+++APF ++++ + H + ++A EK+YA L+ +G +V +DD E+ G F +L+ Sbjct: 467 WPEAIAPFTVAIVPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFKDIELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R +E + + ++ + + S Sbjct: 527 GIPHTIVIGDRSMDEGHFEYKNRRANTKEAVEMANIVEHIKAQLS 571 >gi|9105289|gb|AAF83255.1|AE003895_6 prolyl-tRNA synthetase [Xylella fastidiosa 9a5c] Length = 582 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 113/218 (51%), Positives = 149/218 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+R+E Sbjct: 19 MRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDE 78 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM +PT+Q +LW ES R++ +G ++L++ DR Y PT EE +TD R Sbjct: 79 MNRAGAVEMLLPTIQPRELWEESERWEKFGNQLLKIKDRKQAEYCYSPTAEEAVTDYVRQ 138 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L Y M + Sbjct: 139 ELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLNDADLVREYENMRAT 198 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE Sbjct: 199 YTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIADSGE 236 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/152 (40%), Positives = 86/152 (56%), Gaps = 1/152 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G KY+ M AT GK + MG YGIG R+VAA IE +HD GI Sbjct: 420 ARGIEVGHVFQLGRKYAEAMKATVLDEYGKAVTMTMGCYGIGVSRIVAAAIEQNHDVAGI 479 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWP S+AP+++++ I D V A E + A L D DD G + G FA +L Sbjct: 480 IWPASIAPWQVAVCVINPKKDPVITAAAEVLLAELQSADVDTVLDDRGLRPGVMFADMEL 539 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +G P +++V + ++ E + R T + E++ Sbjct: 540 IGIPHRIVVSERGLAAGTYEYRARHTAMVENL 571 >gi|320529253|ref|ZP_08030345.1| prolyl-tRNA synthetase [Selenomonas artemidis F0399] gi|320138883|gb|EFW30773.1| prolyl-tRNA synthetase [Selenomonas artemidis F0399] Length = 570 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 120/282 (42%), Positives = 173/282 (61%), Gaps = 6/282 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + P L+ P +AEIASH+L+ R G+I + + G+Y++LPL + L + IIREE Sbjct: 1 MRATNLYAPTLRNTPAEAEIASHRLLYRAGLIRKSAGGMYTYLPLAWRTLRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P LQ A+LW ESGR+ +YG EM+R+ DR+++A GPTHEE++T + R Sbjct: 61 MDAAGGQEIMMPILQPAELWEESGRWGAYGAEMMRIQDRHERAFCLGPTHEEMITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFGVMRSREF+M+D YSFD EG SY KM+ + Sbjct: 121 ELRSYKQLPVMLYQIQDKFRDERRPRFGVMRSREFIMQDLYSFDKDVEGMHESYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F R GL + A+ G IGG S EF VLA GE+++ C D + E Sbjct: 181 YTNVFTRCGLNFRAVEADCGAIGGGRSEEFTVLAPEGESRIACC-DACSYAASDEKAQLR 239 Query: 241 DIISLNSI---VEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 + + + +E+ + P+ +T + E F +P K + A Sbjct: 240 PLDAPDEAELPLEKVSTPHTSTIALLAE--FLKIPVEKTIKA 279 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/160 (41%), Positives = 95/160 (59%), Gaps = 8/160 (5%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RGIE G IF GTKYS M A F DGK +QMG YGIG R +AA IE +HD GI Sbjct: 404 SRGIEAGQIFALGTKYSEAMQANFLDVDGKLKPLQMGCYGIGVGRTMAAAIEQNHDEHGI 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP ++AP+++ ++ + A + E+IY L G DV DD E+ G +F DL+ Sbjct: 464 IWPRAIAPYEVVVVAVNAKVEEQLAYAEEIYEELRAAGIDVLLDDRRERAGVKFNDCDLI 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 G+P+++ +G K + + +E+K R TG E++N+A Sbjct: 524 GYPVRIAIGPKTIENGSIEVKLRRTG--------ELVNFA 555 >gi|54310060|ref|YP_131080.1| prolyl-tRNA synthetase [Photobacterium profundum SS9] gi|81828683|sp|Q6LN48|SYP_PHOPR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|46914499|emb|CAG21278.1| putative prolyl-tRNA synthetase [Photobacterium profundum SS9] Length = 571 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 151/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVEILMPVVQPFELWEETGRSEKMGPELLRFTDRHSRPFVLSPTAEEVVTSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EISSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S D Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSSD 226 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 100/165 (60%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ G DGK ++MG YGIG R+VA+ IE ++D GII Sbjct: 407 RGIEVGHIFQLGTNYSKKMNCNVLGPDGKSATLEMGCYGIGVSRIVASAIEQNNDENGII 466 Query: 340 WPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP ++APF+++++ + A + + A E +YA L+ G +V +DD E+ G F +L+ Sbjct: 467 WPTALAPFQVAIVPMNMAKSEEVKAAAESLYAELTAAGIEVLFDDRKERPGVMFKDIELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G++ + + ++E K R G + + + +V+ + + Sbjct: 527 GIPHTIVIGNRSLENGEMEYKDRRDGNKVAVPVADVVEMIKQKLA 571 >gi|71899288|ref|ZP_00681449.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1] gi|71730914|gb|EAO32984.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1] Length = 303 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 113/218 (51%), Positives = 150/218 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+R+E Sbjct: 1 MRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM +PT+Q +LW ES R++ +G ++L++ DR Y PT EE +TD R Sbjct: 61 MNRAGAVEMLLPTIQPRELWEESERWEKFGSQLLKIKDRKQAEYCYSPTAEEAVTDYVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ Y M + Sbjct: 121 ELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLSDADLVREYENMRAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE Sbjct: 181 YTRIFTRLGLEFRSVQADSGAIGGDASQEFHVIADSGE 218 >gi|325923311|ref|ZP_08184984.1| prolyl-tRNA synthetase, family II [Xanthomonas gardneri ATCC 19865] gi|325546238|gb|EGD17419.1| prolyl-tRNA synthetase, family II [Xanthomonas gardneri ATCC 19865] Length = 564 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 114/218 (52%), Positives = 151/218 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ ++A+SG IGGD S EF V+A +GE Sbjct: 181 YTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIAASGE 218 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 3/153 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT +GK ++MG YGIG R+VAA IE +HD GI Sbjct: 402 ARGIEVGHVFQLGSQYAQALQATVIDENGKLAVMKMGCYGIGISRIVAAAIEQNHDEAGI 461 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +AP++ + +IN K QV A + L G + DD G + G+ FA + Sbjct: 462 IWPAPMAPWQVVVCVINPKQDPQVI-AAAGALLDELIAAGIEAALDDRGLRPGAMFADME 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 LLG P +V+V + ++ E + R E++ Sbjct: 521 LLGIPHRVVVSERGLAAGTFEYRARTAEAAENL 553 >gi|93005293|ref|YP_579730.1| prolyl-tRNA synthetase [Psychrobacter cryohalolentis K5] gi|114152235|sp|Q1QDK7|SYP_PSYCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|92392971|gb|ABE74246.1| prolyl-tRNA synthetase [Psychrobacter cryohalolentis K5] Length = 572 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 157/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LM+R G+I + + G+Y WLP+G + L V I+REE Sbjct: 1 MKASQFLFATLKETPSDADIASSQLMVRAGLIRKIASGLYIWLPMGLRVLQKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P Q A+LW +GR++ YG E+LR DR+D+ + GPTHEEV+T++ + Sbjct: 61 MQNIGAQEVLMPMTQPAELWQLTGRFNDYGPELLRFKDRHDRDFVLGPTHEEVITNLAQG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP TF+QIQ KFRDE+RPRFGVMR+REF MKDAYSF + +Y++M+ + Sbjct: 121 ELRSYKQLPITFFQIQNKFRDEIRPRFGVMRAREFTMKDAYSFHVDQASLAKTYDEMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + S Sbjct: 181 YTRIFTRLGLDFRAVQADTGSIGGFASHEFHVLADSGEDDIAFS 224 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 107/189 (56%), Gaps = 8/189 (4%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K RGIEVGHIF G KYS M+ T G DGK + MG YG Sbjct: 384 DIRNVHEGDPSPDGKGTLQIKRGIEVGHIFQLGDKYSQAMNCTVSGEDGKPVTLMMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWP------DSVAPFKISLINIKAHDQVCRDACEKIYARL 372 IG R++AA IE ++D GI+WP DS+APF+++++ +K+ + + +Y L Sbjct: 444 IGVSRIIAAAIEQNNDENGIMWPSTPDISDSLAPFEVAIVPMKSKEDTVMETATALYEEL 503 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +G +V DD E+ G +FA +L+G P +++V + +++ K E +R ++ +S + Sbjct: 504 KALGINVLLDDRNERPGVKFADLELIGIPHRIVVSDRNLAEDKYEYVNRRDSEKQLLSRD 563 Query: 433 EVINYASHR 441 EVI S + Sbjct: 564 EVIAKVSGK 572 >gi|188997600|ref|YP_001931851.1| prolyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|226701347|sp|B2V6W5|SYP_SULSY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|188932667|gb|ACD67297.1| prolyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 564 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 153/226 (67%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK+F+P L+ENP DA + SH ++R G I S GIY +LPLG K L + IIR+ Sbjct: 1 MLASKFFMPTLKENPSDAVVPSHIYLVRGGFIRSLSAGIYEYLPLGLKVLRKIENIIRKH 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +GA+E+ +P L A+LW E+GR+ YGKE+ RL DR D GPTHEE +TD+ R Sbjct: 61 MDDSGALEVLLPILTPAELWKETGRWHVYGKELFRLKDRKDAEFALGPTHEETITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP FYQIQ KFRDE RPR+G++R REF+MKD YSFD++ E +K +Y M + Sbjct: 121 NVRSYKDLPLNFYQIQTKFRDEARPRYGLIRGREFIMKDGYSFDVSEEDAKKTYEVMKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y +IF LGL + + A+ G IGG SHEF+V +GE V+C K Sbjct: 181 YHKIFKELGLDYLMVEADVGAIGGKFSHEFVVKVPSGEAHIVYCEK 226 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 65/156 (41%), Positives = 99/156 (63%), Gaps = 1/156 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 G+EVGHIF GTKYS M A F DGK+ + MG YGIG R+++A++E HD KGIIW Sbjct: 402 GLEVGHIFLLGTKYSESMKAYFVDKDGKEKSIIMGCYGIGVSRLISAIVEQYHDDKGIIW 461 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P+++APF + ++ + DQ + IY +L + G DV D+ E G++F ADL+G Sbjct: 462 PENLAPFNVHILVLNPKDQESLNVGFDIYKKLKEKGLDVLLDERDESAGAKFKDADLIGI 521 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 P ++++G K + + KVE + R I+E + ++ +IN Sbjct: 522 PHRIVIG-KALKEGKVEYQKRDGSIKELVDVKLIIN 556 >gi|166713436|ref|ZP_02244643.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 564 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 114/218 (52%), Positives = 150/218 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE Sbjct: 181 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGE 218 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/153 (39%), Positives = 87/153 (56%), Gaps = 3/153 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +HD GI Sbjct: 402 ARGIEVGHVFQLGSQYAQALQATVIDEGGKVAVMKMGCYGIGISRIVAAAIEQNHDDAGI 461 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +AP++ + +IN K QV A + + L G D DD G + G+ FA + Sbjct: 462 IWPAPMAPWQVVVCVINPKQDAQVV-SAAQALLDELIAAGLDAALDDRGLRPGAMFADME 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 LLG P +V+V + ++ E + R E++ Sbjct: 521 LLGIPHRVVVSERGLAAGTFEYRARTAAAAENL 553 >gi|170288224|ref|YP_001738462.1| prolyl-tRNA synthetase [Thermotoga sp. RQ2] gi|226701351|sp|B1L8Y1|SYP_THESQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|170175727|gb|ACB08779.1| prolyl-tRNA synthetase [Thermotoga sp. RQ2] Length = 577 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 156/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + P L+E P D E SH+ +LR G I + + GIY++LPLG++ L + I+REE Sbjct: 1 MRMKDLYAPTLKETPSDVETVSHEYLLRGGFIRKTAAGIYTYLPLGRRVLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P LQ A+LW +SGR+D YG EM++L DR+++ GPTHEE++TD+ ++ Sbjct: 61 MNRIGAQEILMPILQPAELWKQSGRWDDYGPEMMKLKDRHERDFTLGPTHEEIVTDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQ+ K+RDE+RPRFG++R+REF+MKDAYSF + E +Y + Sbjct: 121 ELRSYRQLPLVVYQVANKYRDEIRPRFGLLRAREFIMKDAYSFHSSWESLDETYELFKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSK 225 Y RI RLG+K + + AE+G IGG+ SHEF+V A GET V FC K Sbjct: 181 YSRIMERLGVKYMVIEAETGAIGGNASHEFVVPAKIGETNVLFCEK 226 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 87/146 (59%), Gaps = 1/146 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + +GIE+GHIF GTKYS M A F +G+ MG YG G R +AAV+E HD G Sbjct: 400 ATKGIELGHIFKLGTKYSEAMKAYFMDENGEMKPFIMGCYGWGVSRTMAAVVEHFHDENG 459 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 +IWP S+AP+ + + + +D + EKIY LS+ G +V DD G +F ADL Sbjct: 460 MIWPLSIAPYTVVVDILNMNDAEQKQVGEKIYQVLSEKGEEVVLDDREVSPGFKFKDADL 519 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLT 423 +GFP+++ VG + + + VE+K R + Sbjct: 520 IGFPIRINVG-RSLKEGVVELKKRYS 544 >gi|197334450|ref|YP_002155444.1| prolyl-tRNA synthetase [Vibrio fischeri MJ11] gi|226701355|sp|B5FBD6|SYP_VIBFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|197315940|gb|ACH65387.1| prolyl-tRNA synthetase [Vibrio fischeri MJ11] Length = 571 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRRLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 102/165 (61%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ A+GK+ ++MG YGIG RVVA+ IE ++D GI+ Sbjct: 407 RGIEVGHIFQLGTAYSEAMNCGVLDANGKNVILEMGCYGIGVSRVVASAIEQNNDEYGIV 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP+++APF ++++ + H + ++A EK+YA L+ +G +V +DD E+ G F +L+ Sbjct: 467 WPEAIAPFTVAIVPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFKDIELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R +E + + ++ + + S Sbjct: 527 GIPHTIVIGDRSMDEGNFEYKNRRANTKEAVEMANIVEHIKAQLS 571 >gi|260892490|ref|YP_003238587.1| prolyl-tRNA synthetase [Ammonifex degensii KC4] gi|260864631|gb|ACX51737.1| prolyl-tRNA synthetase [Ammonifex degensii KC4] Length = 574 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 117/265 (44%), Positives = 168/265 (63%), Gaps = 3/265 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + +P L+E P +AE+ASH+L+LR G I + + GIY+ LPLG++ L + +I+REE Sbjct: 1 MRLTTWLVPTLREVPAEAEVASHRLLLRAGFIRRVAAGIYTLLPLGKRVLAKIESIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G E+ +P LQ A+LW SGR++ YG E+ RL DR+ + GPTHEE++T + + Sbjct: 61 MNRAGGQEILMPILQPAELWHRSGRWEVYGPELFRLKDRHGRDFCLGPTHEEMITALVAA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQI K+RDE RPRFG++R REF+MKD YSFD G + SY KM+ + Sbjct: 121 EVRSYKQLPLLLYQIGNKYRDERRPRFGLLRGREFIMKDLYSFDRDWAGLEESYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDF 239 Y R+F R+GL + A++G IGG +SHEF+ LAD GE V+C + E Sbjct: 181 YTRVFTRVGLNFRAVEADTGAIGGSVSHEFMALADAGEAVVVYCPDAACGYAANVEKA-- 238 Query: 240 DDIISLNSIVEQWTAPYAATSDVHN 264 + + SL I E+ AT V + Sbjct: 239 ESLPSLEEIGEEGPMELVATPGVRS 263 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 109/189 (57%), Gaps = 7/189 (3%) Query: 255 PYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ D P + +S RGIEVG IF G KYS ++A + G+ + Sbjct: 376 PVQNVADIRQVSEGDPCPRCGQPLLSVRGIEVGQIFQLGDKYSRALNAYYLDEKGEKRPI 435 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R +AAV+E HD +GIIWP +VAPF++ ++ + + R+ E+IY L Sbjct: 436 IMGCYGIGITRTMAAVVEQHHDEEGIIWPLAVAPFQVLVLPVNYEEVPQREVAEEIYNLL 495 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG----IRED 428 + G +V DD E+ G +F ADL+G+PL++ VG + ++ KVE+K R TG + +D Sbjct: 496 REKGIEVLLDDREERPGVKFKDADLVGYPLRITVG-RHAAEGKVELKLRRTGETWLVDKD 554 Query: 429 MSLEEVINY 437 LE+V + Sbjct: 555 EVLEKVAAF 563 >gi|254992869|ref|ZP_05275059.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] Length = 568 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 115/218 (52%), Positives = 147/218 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGE 218 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 98/173 (56%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 403 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y+ L G V DD E+ G +FA AD Sbjct: 463 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYSSLQDAGFSVLIDDRAERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGVVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|315282166|ref|ZP_07870634.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313614198|gb|EFR87874.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 308 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 119/235 (50%), Positives = 154/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 >gi|313887818|ref|ZP_07821498.1| proline--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846161|gb|EFR33542.1| proline--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 567 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 107/225 (47%), Positives = 158/225 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++P L+E+P+DAEIASHK +LR GMI + + G+Y++LPLG +++ + I+R+E Sbjct: 1 MRLSKLYMPTLREDPQDAEIASHKFLLRAGMIRKSASGVYTYLPLGYRSIRKIENIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E+ + +Q A++W ESGR++ +G EM +L DRND+ GPT EE T + R Sbjct: 61 MDKAGAMEILMSAIQPAEIWKESGRWEKFGPEMFKLRDRNDREFCLGPTAEEYFTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ K+RDE RPRFG+ R+REF MKDAY+FD +PE +Y M+ + Sbjct: 121 EVKSYKDLPLNLYQIQTKYRDEKRPRFGINRAREFSMKDAYTFDTSPETLHTAYMNMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y +IF RL L + ++G +GG SHEFI L++TGE + S+ Sbjct: 181 YEKIFDRLELDYKIVEGDNGAMGGTGSHEFIALSETGEGVIVYSE 225 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/159 (45%), Positives = 97/159 (61%), Gaps = 5/159 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVG+IF GTKYS ++AT+ +GK +Y MGSYG+G R V AVIE +HD GI Sbjct: 401 ARGIEVGNIFKLGTKYSEALNATYLDENGKANYFYMGSYGVGVTRSVTAVIEQNHDDNGI 460 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP SVAP++ ++++N K +QV EKIY L G +V DD E+ G +F D Sbjct: 461 IWPISVAPYEAIVTIVNTKDEEQVA--LGEKIYKELEAKGVEVLLDDRKERPGVKFKDRD 518 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G PL++ G K +S VE R ++S +E I Sbjct: 519 LIGIPLRITCGKK-SGESIVEYSTRREMENSEISADEAI 556 >gi|110833600|ref|YP_692459.1| prolyl-tRNA synthetase [Alcanivorax borkumensis SK2] gi|110646711|emb|CAL16187.1| Prolyl-tRNA synthetase [Alcanivorax borkumensis SK2] Length = 566 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 123/267 (46%), Positives = 169/267 (63%), Gaps = 9/267 (3%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L ++E P DA + SH+LMLR GM+ + + G+Y+WLP G + L V +IREE +R GA Sbjct: 1 MLATVKETPADAVVTSHQLMLRAGMVRKLASGLYTWLPSGLRVLRKVEQVIREEMDRAGA 60 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ +P +Q +LW ESGR +YG E+LR+ DR++ GPTHEEV+TD+ R+ + SY+ Sbjct: 61 QEVLMPVVQPMELWEESGRAPAYGPELLRITDRHNNPFCLGPTHEEVITDMVRNELHSYK 120 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP FYQIQ KFRDE+RPRFG+MRSREF+MKDAYSF + +Y M +Y IF Sbjct: 121 QLPANFYQIQTKFRDEIRPRFGIMRSREFIMKDAYSFHTNMDSLADTYQIMHRAYCAIFD 180 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 RLGL P+ A++G IGG SHEF VLA++GE + S D D+ + N + + ++ Sbjct: 181 RLGLDYRPVEADTGAIGGAASHEFHVLAESGEDDIAFS-DGSDY---AANVELAEALAPT 236 Query: 247 SIVEQWTAPYAATS--DVHNEKLFDSL 271 S + AP AA D N K + L Sbjct: 237 S---ERPAPGAAIEKVDTPNAKTIEEL 260 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 108/169 (63%), Gaps = 4/169 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS + AT +GK + MG YGIG RVVAA IE ++D +GII Sbjct: 399 RGIEVGHIFQLGTKYSEALGATVLDENGKSVVMPMGCYGIGVTRVVAAAIEQNNDDRGII 458 Query: 340 WPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 WP+++APF+++L +NIK + R+ EK+YA L+ +G +V +DD E++G + A + Sbjct: 459 WPEAIAPFQVALVPVNIKKSPR-ERELAEKLYAELTAMGIEVLFDDREKERLGVKLADTE 517 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 LLG P ++++ + + + +E K R + +++++E++ + + N Sbjct: 518 LLGIPHRIVIAERGMDNGVLEYKGRRDADKTEVAMDEIVAFLKEKMGMN 566 >gi|160946442|ref|ZP_02093651.1| hypothetical protein PEPMIC_00402 [Parvimonas micra ATCC 33270] gi|158447558|gb|EDP24553.1| hypothetical protein PEPMIC_00402 [Parvimonas micra ATCC 33270] Length = 567 Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 110/238 (46%), Positives = 159/238 (66%), Gaps = 1/238 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ +Y++P L+E+P++AEI SHKL+LR GMI + + GIYS+LPLG + + V I+REE Sbjct: 1 MKMKRYYMPTLREDPQEAEIISHKLLLRAGMIRKSAAGIYSYLPLGYRTIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ + LQ ++W ESGR+ ++G EM ++ DRN++ GPT EE T + Sbjct: 61 MDRMGGYEILMSALQPKEIWEESGRWQTFGPEMFKVKDRNEREFCLGPTAEEYFTTLISG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFG+ R+REF MKDAY+FD++PE SY +M+ + Sbjct: 121 EIKSYKQLPLNIYQIQTKYRDEKRPRFGINRAREFSMKDAYTFDVSPEMMMESYKEMWKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 Y ++F+RLGL + ++G +GG+ SHEFI L+D GE V C D + E + Sbjct: 181 YEKVFNRLGLNYKIVAGDAGAMGGNSSHEFIALSDVGEG-VICYCDESGYAATDEKAE 237 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 69/160 (43%), Positives = 98/160 (61%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVG+IF GTKYS ++ATF +G Y MGS+GIG R + A+IE ++D KGI Sbjct: 401 ARGIEVGNIFQLGTKYSKALNATFLDENGVSQYFWMGSHGIGITRSITAIIEQNNDEKGI 460 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP VAP+ ++++NI +Q+ EKI+ L G +V DD E+IG +F D Sbjct: 461 IWPIQVAPYHAIVTVVNINDEEQM--KLGEKIHDELEAQGVEVMLDDRKERIGVKFNDRD 518 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+G PL++ VG K +++ +E R +MS E+ IN Sbjct: 519 LIGIPLRITVGKK-ANENIIEFSTRREMENVEMSSEDAIN 557 >gi|296330872|ref|ZP_06873347.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674390|ref|YP_003866062.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151877|gb|EFG92751.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412634|gb|ADM37753.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 564 Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DAE SH+L+LR G I Q++ G+YS++PL K + N+ I+REE Sbjct: 1 MRQSLTLIPTLREVPADAEAKSHQLLLRAGFIRQNTSGVYSYMPLAYKVIQNIQQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P LQ A+ W ESGR+ +YG E++RL DR+ + G THEEV+T + R Sbjct: 61 MEKIDAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRHGREFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E +Y KM+ + Sbjct: 121 EVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYQKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R G+ P+ A+SG +GG +HEF+ L+ GE + S + Sbjct: 181 YSNIFARCGINVRPVIADSGAMGGKDTHEFMALSAIGEDTIAYSDE 226 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 102/163 (62%), Gaps = 1/163 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GT+YS M+AT+ +G+ + MG YG+G R ++A+ E HD KG+ Sbjct: 403 AEGIEVGQVFKLGTRYSEAMNATYLDENGRAQPMLMGCYGVGVSRTLSAIAEQHHDDKGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAP+ + ++ + + R+ EK+YA L G +V +DD E+ G +FA +DL+ Sbjct: 463 IWPKSVAPYDLHILALNMKNDSQRELAEKLYANLKAEGYEVLYDDRAERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 G P+++ VG K + VE+K R TG ++S++E+ + S + Sbjct: 523 GLPIRITVG-KRADEGIVEVKIRQTGESTEVSVDELTAFISKQ 564 >gi|261405336|ref|YP_003241577.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261281799|gb|ACX63770.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 575 Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 153/226 (67%), Gaps = 2/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ + +++ P +AE SH+ MLR G I Q + GIYS+LPLG + L + IIR+E Sbjct: 1 MRQSQLLMTTMRDVPSEAEALSHQWMLRGGYIRQTAAGIYSYLPLGWRVLRKIETIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A+LW ESGRYD YG E++RL DR+D+ + GPTHEEV+T I R Sbjct: 61 MDAAGGQELLMPAVQPAELWKESGRYDVYGAELIRLYDRHDREFVLGPTHEEVITSIVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ K+RDE RPRFG++R REFLMKDAYSFD EG SY M+ + Sbjct: 121 EISSYRKLPVNLYQIQSKYRDERRPRFGLLRGREFLMKDAYSFDRDWEGLDASYRNMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGE-TQVFCS 224 Y RIF R GL + A++G IGG +HEF+ LAD GE T V CS Sbjct: 181 YERIFSRCGLMFRAVEADAGAIGGQGETHEFMALADIGEDTVVSCS 226 Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 90/157 (57%), Gaps = 2/157 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GH+F GTKYS M+ + ADG++ + MG YGIG RV+AA+ E + ++ Sbjct: 410 RGIELGHVFKLGTKYSDAMNGKYLDADGREKPLIMGCYGIGVSRVMAAIAEQRISDERLV 469 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP SVAPF++ +I + D+ E IY LS G + DD E+ G +F ADL G Sbjct: 470 WPMSVAPFRVHIIPVAVKDETQMQLAEHIYRELSGAGLEPLLDDRDERAGVKFKDADLAG 529 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 PL++IVG + + +VE GI+ M EE I Sbjct: 530 APLRIIVG-RGAASGEVEWMGE-DGIKISMPAEEAIQ 564 >gi|166367159|ref|YP_001659432.1| prolyl-tRNA synthetase [Microcystis aeruginosa NIES-843] gi|189083503|sp|B0JTD7|SYP_MICAN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166089532|dbj|BAG04240.1| proline-tRNA ligase [Microcystis aeruginosa NIES-843] Length = 603 Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 117/229 (51%), Positives = 152/229 (66%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHK ++R G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQQLFVTLREDPAEAEIPSHKCLVRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N+ GA E +P LQ A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T + Sbjct: 61 MNKAGAQECLLPQLQPAELWQESGRWDTYTKAEGIMFALTDRQNRELGLGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF+L E K +Y M Sbjct: 121 ARDLIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFNLDEECLKKTYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 ++Y IF R GL + A+SG IGG S EF+VLAD GE +V + D Sbjct: 181 DIAYRNIFRRCGLAFRAVEADSGAIGGSASQEFMVLADAGEDEVLFTAD 229 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/174 (36%), Positives = 98/174 (56%), Gaps = 5/174 (2%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIEVGHIF G KYS M+A + G+ + MG YGIG R+ A +E Sbjct: 427 PNQTLQSARGIEVGHIFQLGYKYSQAMNAFYTNEAGESTPICMGCYGIGVSRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 S+D GIIWP ++AP++ ++ N+ +QV E +Y L++ G + DD E+ G Sbjct: 487 SYDKDGIIWPVAIAPYQAIVVIPNLADAEQV--KTAESLYNELNQAGIETLLDDRDERAG 544 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +F ADL+G P +++ G K + KVE+ R + ++++ EV++Y S Sbjct: 545 VKFKDADLIGIPYRIVTG-KSLKSGKVELVERASKKASEVAINEVVSYLKTAIS 597 >gi|16800424|ref|NP_470692.1| prolyl-tRNA synthetase [Listeria innocua Clip11262] gi|81853975|sp|Q92C35|SYP_LISIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|16413829|emb|CAC96587.1| prolyl-tRNA synthetase [Listeria innocua Clip11262] Length = 568 Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 118/235 (50%), Positives = 155/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + AI+REE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQVASGIYSYLPLATLTLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA EM +P LQ A+LW ESGR+ YG E++RL DR + + GPTHEE++T + R Sbjct: 61 LEAIGAAEMLMPALQPAELWHESGRWADYGPELMRLKDRAARDFVLGPTHEELITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E ++ M + Sbjct: 121 EIKSYKRLPITLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDETFELMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFSRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 70/173 (40%), Positives = 99/173 (57%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G+ Sbjct: 403 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGLSRILSAIAEQSNDENGL 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L K G V DD E+ G +FA AD Sbjct: 463 VWDKQISPFDLHLIPVNMKSEEQVA--FAESLYDSLQKAGFSVLIDDRTERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGIVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|21230114|ref|NP_636031.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769896|ref|YP_244658.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|81304150|sp|Q4UQN5|SYP_XANC8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81860394|sp|Q8PCS4|SYP_XANCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|21111643|gb|AAM39955.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575228|gb|AAY50638.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] Length = 564 Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 113/218 (51%), Positives = 152/218 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYTPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y+RIF RLGL+ ++A+SG IGGD S EF V+A++GE Sbjct: 181 YIRIFTRLGLEFRAVQADSGAIGGDASQEFHVIAESGE 218 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 60/152 (39%), Positives = 87/152 (57%), Gaps = 3/152 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F G+KY+ + AT +GK ++MG YGIG R+VAA IE +HD GI+ Sbjct: 403 RGIEVGHVFQLGSKYAEALQATVLDENGKAAVMKMGCYGIGISRIVAAAIEQNHDDAGIV 462 Query: 340 WPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP +AP+K + +IN K QV A + + L G D DD G + G+ FA +L Sbjct: 463 WPAPMAPWKVVVCVINPKQDAQVAAAAGD-LLEELIAAGIDAALDDRGLRPGAMFADMEL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 LG P +V+V + ++ E + R E++ Sbjct: 522 LGVPHRVVVSERGLAAGTFEYRARTAESAENL 553 >gi|313623934|gb|EFR94040.1| prolyl-tRNA synthetase [Listeria innocua FSL J1-023] Length = 568 Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 118/235 (50%), Positives = 155/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + AI+REE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQVASGIYSYLPLATLTLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA EM +P LQ A+LW ESGR+ YG E++RL DR + + GPTHEE++T + R Sbjct: 61 LEAIGAAEMLMPALQPAELWHESGRWADYGPELMRLKDRAARDFVLGPTHEELITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E ++ M + Sbjct: 121 EIKSYKRLPITLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDETFELMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFSRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 70/173 (40%), Positives = 99/173 (57%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G+ Sbjct: 403 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGLSRILSAIAEQSNDENGL 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L K G V DD E+ G +FA AD Sbjct: 463 VWDKQISPFDLHLIPVNMKSEEQVA--FAESLYDSLQKAGFSVLIDDRTERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGIVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|188993111|ref|YP_001905121.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. B100] gi|226701356|sp|B0RVJ2|SYP_XANCB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167734871|emb|CAP53083.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 564 Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 113/218 (51%), Positives = 152/218 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYTPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y+RIF RLGL+ ++A+SG IGGD S EF V+A++GE Sbjct: 181 YIRIFTRLGLEFRAVQADSGAIGGDASQEFHVIAESGE 218 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 60/152 (39%), Positives = 87/152 (57%), Gaps = 3/152 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+F G+KY+ + AT +GK ++MG YGIG R+VAA IE +HD GI+ Sbjct: 403 RGIEVGHVFQLGSKYAEALQATVLDENGKAAVMKMGCYGIGISRIVAAAIEQNHDDAGIV 462 Query: 340 WPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP +AP+K + +IN K QV A + + L G D DD G + G+ FA +L Sbjct: 463 WPAPMAPWKVVVCVINPKQDAQVAAAAGD-LLEELIAAGIDAALDDRGLRPGAMFADMEL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 LG P +V+V + ++ E + R E++ Sbjct: 522 LGIPHRVVVSERGLAAGTFEYRARTAESAENL 553 >gi|329925255|ref|ZP_08280198.1| proline--tRNA ligase [Paenibacillus sp. HGF5] gi|328940088|gb|EGG36421.1| proline--tRNA ligase [Paenibacillus sp. HGF5] Length = 575 Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 153/226 (67%), Gaps = 2/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ + +++ P +AE SH+ MLR G I Q + GIYS+LPLG + L + AIIR+E Sbjct: 1 MRQSQLLMTTMRDVPSEAEALSHQWMLRGGYIRQTAAGIYSYLPLGWRVLRKIEAIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A+LW ESGRYD YG E++RL DR+D+ + GPTHEEV+T I R Sbjct: 61 MDSAGGQELLMPAVQPAELWKESGRYDVYGAELIRLHDRHDREFVLGPTHEEVITSIVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ K+RDE RPRFG++R REFLMKDAYSFD G SY M+ + Sbjct: 121 EISSYRKLPVNLYQIQSKYRDERRPRFGLLRGREFLMKDAYSFDRDWGGLDASYRNMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGE-TQVFCS 224 Y RIF R GL + A++G IGG +HEF+ LAD GE T V CS Sbjct: 181 YERIFRRCGLMFRAVEADAGAIGGQGETHEFMALADIGEDTVVSCS 226 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 90/157 (57%), Gaps = 2/157 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GH+F GTKYS M+ + ADG++ + MG YGIG RV+AA+ E ++ Sbjct: 410 RGIELGHVFKLGTKYSDAMNGKYLDADGREKPLIMGCYGIGVSRVMAAIAEQRISDGRLV 469 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP SVAPFK+ +I + D+ E IY LS G + DD E+ G +F ADL G Sbjct: 470 WPMSVAPFKVHIIPVAVKDETQMQLAEHIYRELSGAGLEPLLDDRDERAGVKFKDADLAG 529 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 PL++IVG + + +VE GI+ + +EE I Sbjct: 530 APLRIIVG-RGAASGEVEWMGE-DGIKISLPVEEAIQ 564 >gi|159030425|emb|CAO91326.1| proS [Microcystis aeruginosa PCC 7806] Length = 603 Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 117/229 (51%), Positives = 152/229 (66%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHK ++R G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQQLFVTLREDPAEAEIPSHKCLVRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N+ GA E +P LQ A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T + Sbjct: 61 MNKAGAQECLLPQLQPAELWQESGRWDTYTKAEGIMFALTDRQNRELGLGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF+L E K +Y M Sbjct: 121 ARDLIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFNLDEECLKKTYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 ++Y IF R GL + A+SG IGG S EF+VLAD GE +V + D Sbjct: 181 DIAYRNIFRRCGLAFRAVEADSGAIGGSASQEFMVLADAGEDEVLFTAD 229 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 97/168 (57%), Gaps = 5/168 (2%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIEVGHIF G KYS M+A + G+ + MG YGIG R+ A +E Sbjct: 427 PNQTLQSARGIEVGHIFQLGYKYSQAMNAFYTNEAGESTPICMGCYGIGVSRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 S+D GIIWP ++AP++ ++ N+ +QV E +Y L++ G + DD E+ G Sbjct: 487 SYDKDGIIWPVAIAPYQAIVVIPNLADAEQV--KTAESLYNELNQAGIETLLDDRNERAG 544 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +F ADL+G P +++ G K + KVE+ R + ++++ EV++Y Sbjct: 545 VKFKDADLIGIPYRIVTG-KSLKSGKVELVERASKKASEVAINEVVSY 591 >gi|330445168|ref|ZP_08308820.1| prolyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489359|dbj|GAA03317.1| prolyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 571 Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG+ S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVWADSGAIGGNGSQEFHVLAESGEDLIAFSTE 226 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 109/165 (66%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVA+ IE ++D GII Sbjct: 407 RGIEVGHIFQLGTTYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVASAIEQNNDENGII 466 Query: 340 WPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF++S++ + A + ++A EK+YA L+ G DV +DD E+ G FA +L+ Sbjct: 467 WPDAIAPFQVSIVPMNMAKSEEVKEAAEKLYAELTAAGIDVLFDDRKERPGVMFADHELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G++ + + ++E K+R G +E +++ +V+ + + + Sbjct: 527 GIPHTIVIGNRSLENGEMEYKNRRAGTKEAVAVNDVVEFLKQKLA 571 >gi|313638094|gb|EFS03361.1| prolyl-tRNA synthetase [Listeria seeligeri FSL S4-171] Length = 568 Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 148/224 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLTLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAVGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E Y+ M + Sbjct: 121 EIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATNESLDEVYDLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL+ + A+SG IGG + EF+ L+D GE + S Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGKETQEFVALSDIGEDTIAYS 224 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 99/173 (57%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G+ Sbjct: 403 AEGIEVGHIFKLGTKYSQAMNATVLDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGL 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L + G V DD E+ G +FA AD Sbjct: 463 VWDKKISPFDLHLIPVNMKSEEQVA--FAETLYQSLQQAGFSVLIDDRSERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGIVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|313633402|gb|EFS00238.1| prolyl-tRNA synthetase [Listeria seeligeri FSL N1-067] Length = 568 Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 148/224 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLTLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAVGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E Y+ M + Sbjct: 121 EIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATNESLDEVYDLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL+ + A+SG IGG + EF+ L+D GE + S Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGKETQEFVALSDIGEDTIAYS 224 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 99/173 (57%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G+ Sbjct: 403 AEGIEVGHIFKLGTKYSQAMNATVLDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGL 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L + G V DD E+ G +FA AD Sbjct: 463 VWDKKISPFDLHLIPVNMKSEEQVA--FAETLYQSLQQAGFSVLIDDRSERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGIVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|285019440|ref|YP_003377151.1| prolyl-tRNA synthetase [Xanthomonas albilineans GPE PC73] gi|283474658|emb|CBA17157.1| probable prolyl-trna synthetase protein [Xanthomonas albilineans] Length = 564 Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 114/218 (52%), Positives = 147/218 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V ++REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVETVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR+ +G MLR+ DR ++ Y PT EE D R Sbjct: 61 MNRAGALEVVFPTIQPRELWDATGRWKKFGDLMLRIRDRKEQDYCYSPTAEEAAADFARH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF L+ Y M + Sbjct: 121 ELNSYKQLPVNFYQIQSKFRDEIRPRFGVMRAREFLMKDAYSFHLSDTDLAREYENMKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ ++A+SG IGGD S EF VLAD+GE Sbjct: 181 YHRIFTRLGLQFRAVQADSGDIGGDASQEFHVLADSGE 218 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/153 (37%), Positives = 86/153 (56%), Gaps = 1/153 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G +Y+ + AT +GK + MG YGIG R+VAA IE +HD GI Sbjct: 402 ARGIEVGHVFQLGRQYAQALDATVLDENGKTVAMAMGCYGIGISRIVAAAIEQNHDAAGI 461 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP +AP+ +++ I HD A + + A L + G D DD G + G+ FA +L Sbjct: 462 RWPQPMAPWAVAICVINPKHDPAIDAAGDALLADLQQAGLDAILDDRGLRAGTMFADIEL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +G P +V+V + ++ E + R G E ++ Sbjct: 522 IGIPHRVVVSERGLAAGTFEYRARSGGDPESLN 554 >gi|269101961|ref|ZP_06154658.1| prolyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] gi|268161859|gb|EEZ40355.1| prolyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] Length = 572 Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEIISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHARPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG+ S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVWADSGAIGGNGSQEFHVLAESGEDLIAFSTE 226 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 113/166 (68%), Gaps = 1/166 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVA+ IE ++D GII Sbjct: 407 RGIEVGHIFQLGTTYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVASAIEQNNDENGII 466 Query: 340 WPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF++S++ + A + ++A EK+YA L+ G DV +DD E+ G FA +L+ Sbjct: 467 WPDAIAPFQVSIVPMNMAKSEEVKEAAEKLYADLTAAGIDVLFDDRKERPGVMFADHELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G P +++G++ + + ++E K+R TG +E++++ +++ + + + +N Sbjct: 527 GIPHTIVIGNRSLENGEMEYKNRRTGTKENVAVTDIVAFVTSKLAN 572 >gi|90580993|ref|ZP_01236794.1| prolyl-tRNA synthetase [Vibrio angustum S14] gi|90437871|gb|EAS63061.1| prolyl-tRNA synthetase [Vibrio angustum S14] Length = 571 Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG+ S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVWADSGAIGGNGSQEFHVLAESGEDLIAFSTE 226 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 109/165 (66%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ A+GK+ ++MG YGIG RVVA+ IE +HD GII Sbjct: 407 RGIEVGHIFQLGNAYSEKMNCGVLDANGKNTILEMGCYGIGVSRVVASAIEQNHDENGII 466 Query: 340 WPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF +S++ + A + ++A EK+YA L+ G +V +DD E+ G FA +LL Sbjct: 467 WPDALAPFHVSIVPMNMAKSEEVKEAAEKLYADLTAAGIEVLFDDRKERPGVMFADHELL 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G++ + + ++E K+R TGI+E +++ +V+ + + + Sbjct: 527 GVPHTIVIGNRSLENGEMEYKNRRTGIKEAVAVNDVVAFLKQKMA 571 >gi|303232756|ref|ZP_07319441.1| proline--tRNA ligase [Atopobium vaginae PB189-T1-4] gi|302481242|gb|EFL44317.1| proline--tRNA ligase [Atopobium vaginae PB189-T1-4] Length = 574 Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 110/221 (49%), Positives = 151/221 (68%), Gaps = 1/221 (0%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ + P L+ENP DA+IASH+L+ R GMI + + G+Y++LPL +++ + IIR+E Sbjct: 8 SRLYAPTLKENPVDADIASHRLLCRAGMIRKAASGLYTYLPLAWRSILKIEGIIRDEMEA 67 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 EM P L SA+LW +SGR+D YG E++RL DR+D GPTHEE D+ RS ++ Sbjct: 68 IDCQEMLTPILTSAELWHQSGRWDVYGPELMRLTDRHDHEYALGPTHEETYVDLVRSELR 127 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY+ LP T Y IQ KFRDE RPRFG+MRSREF+MKDAYSF T E + Y+ +Y Sbjct: 128 SYKQLPVTLYHIQDKFRDERRPRFGLMRSREFIMKDAYSFCATQESLQQCYDDQKQAYAN 187 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 + R G++++P+ A+SG IGGD S EF+ LAD GE + V+C Sbjct: 188 VARRCGIRALPVVADSGQIGGDTSVEFMALADAGEAELVYC 228 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/172 (40%), Positives = 102/172 (59%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE+ +F GTKYS M ATF DG + MG YGIG R +AAV+E +D G Sbjct: 402 SARGIEISQVFQLGTKYSSAMGATFMDEDGTEKPFIMGCYGIGVSRTLAAVVEQHYDDHG 461 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP SVAP+++ +I + +D V I +L+ G +V DD + G +F ADL Sbjct: 462 IIWPISVAPYEVEVIALDTNDDVIWPQATAIAEKLTARGIEVIVDDRELRPGVKFNDADL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 +GFP QV+ G K + VE+K R G R +++L+ +++ R ++++ +L Sbjct: 522 MGFPYQVVCGKKALERGCVELKCRADGSRVEVALDAIVSELEQRIAHDKELL 573 >gi|116872750|ref|YP_849531.1| prolyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123463747|sp|A0AIC0|SYP_LISW6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116741628|emb|CAK20752.1| prolyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 568 Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 118/235 (50%), Positives = 154/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + AIIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLLPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E Y M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYKLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L++ GE + S D D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSEIGEDTIAYS-DASDYAANTE 234 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/173 (40%), Positives = 99/173 (57%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G+ Sbjct: 403 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGL 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L K G V DD E+ G +FA AD Sbjct: 463 VWDKQISPFDLHLIPVNMKSEEQVA--FAESLYDSLQKAGFSVLIDDRAERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGIVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|313609001|gb|EFR84741.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL F2-208] Length = 344 Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 118/235 (50%), Positives = 154/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L++ GE + S D D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSEIGEDTIAYS-DASDYAANTE 234 >gi|218438508|ref|YP_002376837.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7424] gi|226699136|sp|B7K9K1|SYP_CYAP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218171236|gb|ACK69969.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7424] Length = 600 Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 120/229 (52%), Positives = 152/229 (66%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+R+E Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ ++LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNATGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFALEDRQERELGLGPTHEEVITFI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD PEG K +Y M Sbjct: 121 AREMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDTDPEGLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y I R GL + A+SG IGG S EF+VLAD GE +V + D Sbjct: 181 DKAYRNILRRCGLAFRAVDADSGAIGGSGSQEFMVLADAGEDEVLYTDD 229 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 96/159 (60%), Gaps = 1/159 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIEVGHIF GTKYS M AT+ G++ + MG YGIG R+ + +E S+D G Sbjct: 433 SARGIEVGHIFQLGTKYSHAMGATYTNEQGEEMPLVMGCYGIGVSRLAQSAVEQSYDKDG 492 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP ++AP+ ++ +D + EK+Y L+ G + DD E+ G +F ++L Sbjct: 493 IIWPVAIAPYHAIVVIPNINDPQQVEVAEKLYTELNAAGIETLLDDRDERAGVKFKDSEL 552 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +G P +++ G + + + K+E+ R T +D+ ++EV++ Sbjct: 553 VGIPYRIVTG-RSLKEGKLEVVERATKKSQDIPIDEVVS 590 >gi|289434600|ref|YP_003464472.1| hypothetical protein lse_1235 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170844|emb|CBH27386.1| proS [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 568 Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 148/224 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLTLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAVGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E Y+ M + Sbjct: 121 EIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATNESLDEVYDLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL+ + A+SG IGG + EF+ L+D GE + S Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGKETQEFLALSDIGEDTIAYS 224 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 99/173 (57%), Gaps = 13/173 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G+ Sbjct: 403 AEGIEVGHIFKLGTKYSQAMNATVLDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGL 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L + G V DD E+ G +FA AD Sbjct: 463 VWDKKISPFDLHLIPVNMKSEEQVA--FAETLYQSLQQAGFSVLIDDRSERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L+G P+++ VG K ++ VE+K R TG E+I N P+L Sbjct: 521 LIGLPIRITVGKK-AAEGIVEVKIRKTG--------EMIEVRQDELLNTLPIL 564 >gi|122879049|ref|YP_199448.6| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] gi|162319805|ref|YP_449766.2| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578630|ref|YP_001915559.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|114152279|sp|Q2P7I5|SYP_XANOM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152280|sp|Q5H4Q7|SYP_XANOR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701357|sp|B2SPG9|SYP_XANOP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|188523082|gb|ACD61027.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 564 Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 113/218 (51%), Positives = 150/218 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MDRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE Sbjct: 181 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGE 218 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/153 (39%), Positives = 87/153 (56%), Gaps = 3/153 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +HD GI Sbjct: 402 ARGIEVGHVFQLGSQYAQALQATVIDEGGKVAVMKMGCYGIGISRIVAAAIEQNHDDAGI 461 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +AP++ + +IN K QV A + + L G D DD G + G+ FA + Sbjct: 462 IWPAPMAPWQVVVCVINPKQDAQVV-SAAQALLDELIAAGLDAALDDRGLRPGAMFADME 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 LLG P +V+V + ++ E + R E++ Sbjct: 521 LLGIPHRVVVSERGLAAGTFEYRARTAAAAENL 553 >gi|313619139|gb|EFR90927.1| prolyl-tRNA synthetase [Listeria innocua FSL S4-378] Length = 409 Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 118/235 (50%), Positives = 155/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + AI+REE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQVASGIYSYLPLAILTLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA EM +P LQ A+LW ESGR+ YG E++RL DR + + GPTHEE++T + R Sbjct: 61 LEAIGAAEMLMPALQPAELWHESGRWADYGPELMRLKDRAARDFVLGPTHEELITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E ++ M + Sbjct: 121 EIKSYKRLPITLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDETFELMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D D+ +E Sbjct: 181 YSNIFSRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYS-DASDYAANTE 234 >gi|16078720|ref|NP_389539.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221309535|ref|ZP_03591382.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221313859|ref|ZP_03595664.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318782|ref|ZP_03600076.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323054|ref|ZP_03604348.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|321315424|ref|YP_004207711.1| prolyl-tRNA synthetase [Bacillus subtilis BSn5] gi|11134893|sp|O31755|SYP_BACSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|2634029|emb|CAB13530.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|291484212|dbj|BAI85287.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] gi|320021698|gb|ADV96684.1| prolyl-tRNA synthetase [Bacillus subtilis BSn5] Length = 564 Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DAE SH+L+LR G I Q++ G+YS++PL K + N+ I+REE Sbjct: 1 MRQSLTLIPTLREVPADAEAKSHQLLLRAGFIRQNTSGVYSYMPLAYKVIQNIQQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P LQ A+ W ESGR+ +YG E++RL DR+ + G THEEV+T + R Sbjct: 61 MEKIDAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRHGREFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y KM+ + Sbjct: 121 EVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHASAESLDETYQKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R G+ P+ A+SG +GG +HEF+ L+ GE + S + Sbjct: 181 YSNIFARCGINVRPVIADSGAMGGKDTHEFMALSAIGEDTIAYSDE 226 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 102/163 (62%), Gaps = 1/163 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GT+YS M+AT+ +G+ + MG YGIG R ++A+ E HD KG+ Sbjct: 403 AEGIEVGQVFKLGTRYSEAMNATYLDENGRAQPMLMGCYGIGVSRTLSAIAEQHHDEKGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAP+ + ++ + + R+ EK+YA L G +V +DD E+ G +FA +DL+ Sbjct: 463 IWPKSVAPYDLHILALNMKNDGQRELAEKLYADLKAEGYEVLYDDRAERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 G P+++ VG K + VE+K R TG ++S++E+ + S + Sbjct: 523 GLPIRITVG-KRADEGIVEVKIRQTGESTEISVDELSAFISKQ 564 >gi|150388509|ref|YP_001318558.1| prolyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|166980095|sp|A6TL31|SYP_ALKMQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|149948371|gb|ABR46899.1| prolyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 570 Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 114/238 (47%), Positives = 157/238 (65%), Gaps = 3/238 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++P L+E P +AE+ SH+L+LR GMI + G+YS+LPLG + L V I+REE Sbjct: 1 MRMSKLYMPTLREVPSEAELPSHQLLLRAGMIRKLVAGVYSYLPLGYRTLKKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E + LQ +LW +GR+ + G EM+RL DR+++ GPTHEEV+TD+ ++ Sbjct: 61 MDRAGAQEALMSALQPKELWEATGRWQAIGPEMMRLKDRHNREFCLGPTHEEVITDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPRFG+MRSREF+MKDAYSFD EG K SY M+ Sbjct: 121 ELKSYKQLPLNLYQIQTKYRDEKRPRFGLMRSREFIMKDAYSFDKDEEGMKKSYEDMWKG 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENT 237 Y R+F R LK + ++G +G SHEF+ ++ GE+ V +C D D+ E Sbjct: 181 YERVFDRCELKYKVVEGDAGAMGDSESHEFMAMSQYGESLVAYC--DHCDYAATDEKA 236 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 65/156 (41%), Positives = 97/156 (62%), Gaps = 1/156 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVG+IF KYS ++ATF +GK+ Y MGSYGIG R +AAVIE HD KGI Sbjct: 406 RGIEVGNIFQLDMKYSKGLNATFLDENGKEQYFYMGSYGIGIGRTMAAVIEQYHDEKGIK 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++AP+++ + + + R+ EKIY++L G +V DD E G +F A+L+G Sbjct: 466 WPLALAPYQVVVTIVNPNKDEQRELGEKIYSKLLSKGVEVLLDDRKESPGVKFKDAELIG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 P++V+ G K ++ VE R T ++++ +EV+ Sbjct: 526 IPIRVVAG-KNAGENIVEFALRATDEKKEVEADEVV 560 >gi|84366334|dbj|BAE67492.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 583 Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 113/218 (51%), Positives = 150/218 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 20 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 79 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 80 MDRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 139 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 140 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 199 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE Sbjct: 200 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGE 237 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/153 (39%), Positives = 87/153 (56%), Gaps = 3/153 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +HD GI Sbjct: 421 ARGIEVGHVFQLGSQYAQALQATVIDEGGKVAVMKMGCYGIGISRIVAAAIEQNHDDAGI 480 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +AP++ + +IN K QV A + + L G D DD G + G+ FA + Sbjct: 481 IWPAPMAPWQVVVCVINPKQDAQVV-SAAQALLDELIAAGLDAALDDRGLRPGAMFADME 539 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 LLG P +V+V + ++ E + R E++ Sbjct: 540 LLGIPHRVVVSERGLAAGTFEYRARTAAAAENL 572 >gi|89075398|ref|ZP_01161815.1| prolyl-tRNA synthetase [Photobacterium sp. SKA34] gi|89048814|gb|EAR54384.1| prolyl-tRNA synthetase [Photobacterium sp. SKA34] Length = 571 Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 150/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEIISHQLMLRAGMIRKLASGLYAWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHARPFVLSPTAEEVFTSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 109/165 (66%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ A+GK+ ++MG YGIG RVVA+ IE +HD GII Sbjct: 407 RGIEVGHIFQLGNAYSEKMNCGVLDANGKNAILEMGCYGIGVSRVVASAIEQNHDENGII 466 Query: 340 WPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF +S++ + A + ++A EK+YA L+ G +V +DD E+ G FA +LL Sbjct: 467 WPDALAPFHVSIVPMNMAKSEEVKEAAEKLYADLTAAGIEVLFDDRKERPGVMFADHELL 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G++ + + ++E K+R TGI+E +++ +V+ + + + Sbjct: 527 GIPHTIVIGNRSLENGEMEYKNRRTGIKEAVAVNDVVTFLKQKMA 571 >gi|319941771|ref|ZP_08016093.1| prolyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] gi|319804704|gb|EFW01571.1| prolyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] Length = 582 Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 118/258 (45%), Positives = 171/258 (66%), Gaps = 7/258 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +F+ L+E P DA++ S + M+R+GMI + + G+Y+++PLG + + + IIR+E Sbjct: 1 MRARSFFISTLKEAPADADVISQQYMIRSGMIKKLAAGVYTYMPLGLRVIRKIENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G+IE+ +P +Q A+LW E+GR++ YG E+LR+ DR+ + + PT EEV+TD+ R Sbjct: 61 MVRAGSIELLMPMVQPAELWQETGRWEKYGPELLRIKDRHMRDFVLQPTSEEVITDVARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKS+R LP F+ IQ KFRDE RPRFGVMR REF MKDAYSFD G+ SY+KM+ + Sbjct: 121 EIKSWRQLPVNFFHIQTKFRDERRPRFGVMRGREFTMKDAYSFDRDEAGAGLSYDKMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL +RA++G IGG SHEF V+A+ GE + D D+ + N + Sbjct: 181 YQRIFTRIGLVFRAVRADTGSIGGSRSHEFQVIANAGEDVIAYCPD-SDY---AANIELA 236 Query: 241 DIISLNSIVEQWTAPYAA 258 D +S+++ AP AA Sbjct: 237 DA---SSVLDGRKAPTAA 251 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 96/170 (56%), Gaps = 3/170 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D P+ K V RGIEVGH+F+ GT+YS PM ATF +G+ + Sbjct: 388 PEPVVMDLRNVVEGDKSPDGKGVLRLQRGIEVGHVFFLGTRYSEPMHATFLDENGQPKPM 447 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG RV A IE HD KGI WPD++APF++ + + A + R A + +Y Sbjct: 448 QMGCYGIGVTRVAGAAIEQRHDDKGIQWPDAIAPFEVVICPMNYAKSEDVRKAADALYED 507 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L G DV DD + G FA +L+G P +V++G + + + ++E R Sbjct: 508 LKARGVDVILDDRDMRPGVMFAEWELIGVPHRVVIGDRGLKNGEIEYAER 557 >gi|260775255|ref|ZP_05884152.1| prolyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260608436|gb|EEX34601.1| prolyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 571 Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 151/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 113/186 (60%), Gaps = 3/186 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P K A RGIEVGHIF G YS M+ G DGK+ ++MG YG Sbjct: 386 DLRNVVEGDPSPCGKGTIALKRGIEVGHIFQLGNVYSQAMNCGVLGPDGKNVILEMGCYG 445 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGC 377 IG RVVA+ IE +HD GIIWPD++APF+++++ + H + ++A EK+YA L+ +G Sbjct: 446 IGVSRVVASAIEQNHDKYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGI 505 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V +DD E+ G F+ +L+G P +++G + + + E K+R TG + +++ +++ + Sbjct: 506 EVLFDDRKERPGVMFSDMELIGIPHTIVIGDRSMKEGNFEYKNRRTGDKTPVAMADIVEH 565 Query: 438 ASHRFS 443 + + Sbjct: 566 IKAQLA 571 >gi|218710332|ref|YP_002417953.1| prolyl-tRNA synthetase [Vibrio splendidus LGP32] gi|254782926|sp|B7VIT2|SYP_VIBSL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218323351|emb|CAV19528.1| prolyl-tRNA synthetase [Vibrio splendidus LGP32] Length = 571 Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 151/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVEILMPVVQPFELWEETGRSEKMGPELLRFTDRHSRPFVLSPTAEEVVTSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EISSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSSE 226 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 104/165 (63%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK ++MG YGIG RVVA+ IE +HD GI Sbjct: 407 RGIEVGHIFQLGNTYSKAMNCNVLGPDGKSVILEMGCYGIGVSRVVASAIEQNHDKFGIT 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFKDIELV 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R TG +E ++++ VI + + + Sbjct: 527 GIPHTIVIGDRSMDEGNFEYKNRRTGDKEAIAMDTVIEHLKAQLA 571 >gi|163803792|ref|ZP_02197646.1| prolyl-tRNA synthetase [Vibrio sp. AND4] gi|159172411|gb|EDP57283.1| prolyl-tRNA synthetase [Vibrio sp. AND4] Length = 571 Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 150/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 105/164 (64%), Gaps = 1/164 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK+ ++MG YGIG RVVA+ IE +HD GII Sbjct: 407 RGIEVGHIFQLGNVYSQAMNCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGVEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P +++G + + + E K+R +G + +++ +++ + + Sbjct: 527 GIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMTDIVEHVKAQL 570 >gi|156975521|ref|YP_001446428.1| prolyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116] gi|166980171|sp|A7N1W0|SYP_VIBHB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|156527115|gb|ABU72201.1| hypothetical protein VIBHAR_03253 [Vibrio harveyi ATCC BAA-1116] Length = 571 Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 150/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 105/164 (64%), Gaps = 1/164 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK+ ++MG YGIG RVVA+ IE +HD GII Sbjct: 407 RGIEVGHIFQLGNVYSEAMNCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P +++G + + + E K+R +G + +++ +++ + + Sbjct: 527 GIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMADIVEHVKAQL 570 >gi|153835582|ref|ZP_01988249.1| prolyl-tRNA synthetase [Vibrio harveyi HY01] gi|148867822|gb|EDL67058.1| prolyl-tRNA synthetase [Vibrio harveyi HY01] Length = 571 Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 150/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 105/164 (64%), Gaps = 1/164 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK+ ++MG YGIG RVVA+ IE +HD GII Sbjct: 407 RGIEVGHIFQLGNVYSQAMNCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P +++G + + + E K+R +G + +++ +++ + + Sbjct: 527 GIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMADIVEHVKAQL 570 >gi|58425026|gb|AAW74063.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 595 Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 113/218 (51%), Positives = 150/218 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 32 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 91 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 92 MDRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 151 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 152 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 211 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE Sbjct: 212 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGE 249 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/153 (39%), Positives = 87/153 (56%), Gaps = 3/153 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +HD GI Sbjct: 433 ARGIEVGHVFQLGSQYAQALQATVIDEGGKVAVMKMGCYGIGISRIVAAAIEQNHDDAGI 492 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +AP++ + +IN K QV A + + L G D DD G + G+ FA + Sbjct: 493 IWPAPMAPWQVVVCVINPKQDAQVV-SAAQALLDELIAAGLDAALDDRGLRPGAMFADME 551 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 LLG P +V+V + ++ E + R E++ Sbjct: 552 LLGIPHRVVVSERGLAAGTFEYRARTAAAAENL 584 >gi|269960577|ref|ZP_06174949.1| prolyl-tRNA synthetase [Vibrio harveyi 1DA3] gi|269834654|gb|EEZ88741.1| prolyl-tRNA synthetase [Vibrio harveyi 1DA3] Length = 571 Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 150/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 105/164 (64%), Gaps = 1/164 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK+ ++MG YGIG RVVA+ IE +HD GII Sbjct: 407 RGIEVGHIFQLGNVYSEAMNCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P +++G + + + E K+R +G + +++ +++ + + Sbjct: 527 GIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMADIVEHVKAQL 570 >gi|222099131|ref|YP_002533699.1| Prolyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] gi|254782923|sp|B9KBD7|SYP_THENN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|221571521|gb|ACM22333.1| Prolyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] Length = 577 Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 156/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + P L+E P D E SH+ +LR G I + + GIY++LPLG++ L + I+REE Sbjct: 1 MRMKQLYAPTLKETPSDVETVSHEYLLRGGFIRKVAAGIYTYLPLGRRVLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P LQ A+LW SGR+D YG EM++L DR+++ GPTHEE++TD+ ++ Sbjct: 61 MNRIGAQEILMPILQPAELWKRSGRWDDYGPEMMKLKDRHERDFTLGPTHEEIVTDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQ+ K+RDE+RPRFG++R+REF+MKDAYSF + E +Y + Sbjct: 121 ELRSYRQLPLVVYQVANKYRDEIRPRFGLLRAREFIMKDAYSFHSSWESLDETYELFKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSK 225 Y RI RLG+K + + AE+G IGG+ SHEF+V A GET V +C K Sbjct: 181 YSRIMERLGVKYMVIEAETGAIGGNASHEFVVPAKIGETNVLYCEK 226 Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 58/146 (39%), Positives = 86/146 (58%), Gaps = 1/146 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + +GIE+GHIF GTKYS M A F +G+ MG YG G R +AAV+E HD G Sbjct: 400 ATKGIELGHIFKLGTKYSEAMEAYFMDENGEMKPFIMGCYGWGVSRTMAAVVEHFHDENG 459 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 +IWP S+AP+ + + + +D + E+IY L + G +V DD G +F ADL Sbjct: 460 MIWPLSIAPYTVIVDILNMNDPDQKRVGEEIYRALLEKGEEVVLDDREVSPGFKFKDADL 519 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLT 423 +GFP+++ VG + + D +E+K R + Sbjct: 520 IGFPIRINVG-RSLKDGVIELKKRYS 544 >gi|254508639|ref|ZP_05120754.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 16] gi|219548396|gb|EED25406.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 16] Length = 571 Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 150/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK+ ++MG YGIG RVVA+ IE +HD GII Sbjct: 407 RGIEVGHIFQLGNTYSEAMNCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R +G + +++ +++ + + + Sbjct: 527 GIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMADIVEHVKAQLA 571 >gi|56963999|ref|YP_175730.1| prolyl-tRNA synthetase [Bacillus clausii KSM-K16] gi|81822102|sp|Q5WFT6|SYP_BACSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56910242|dbj|BAD64769.1| proline-tRNA synthetase [Bacillus clausii KSM-K16] Length = 566 Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 121/275 (44%), Positives = 175/275 (63%), Gaps = 6/275 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S Y P +++ P DAE SH+LMLR GM+ Q + G+Y++LPL ++ + + AIIREE Sbjct: 1 MRQSTYLAPTMRDVPADAEAISHQLMLRAGMMRQIAAGVYAYLPLAKRTIAKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+++P+L A+LW SGR+++ G E++RL DR+++ GPTHEEV+T + + Sbjct: 61 LDAIGAQELTLPSLHPAELWQASGRWEAMGDELVRLKDRHNRDFALGPTHEEVITSLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q KFRDE RPRFG++R REF+MKDAYSF +PE +Y +M + Sbjct: 121 GIASYKKLPLCVYQVQTKFRDERRPRFGLLRGREFIMKDAYSFHDSPESLDEAYWQMHGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y RIF R+GL+ P+ A+SG +GG +HEF+ LA GE V S D D+ E Sbjct: 181 YSRIFTRVGLEFRPVIADSGAMGGKDTHEFMALASVGEDTVVYS-DGSDYAANLEMAKAA 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKL-FDS 270 + + ++E+ P A T D E L FD+ Sbjct: 240 LPEAPSVQAHGLLEKRATPEAKTVDEAAEALGFDA 274 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/184 (38%), Positives = 106/184 (57%), Gaps = 7/184 (3%) Query: 258 ATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A D+ + D P+ K A GIE+G IF GT+YS + A + GK MG Sbjct: 379 AYKDLRTVREGDPSPDGKGTLRFAEGIEIGQIFKLGTRYSESLDAKYLDGQGKAQPFLMG 438 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLS 373 YGIG R +AAVIE HD GI+WP +VAPF + L +N+K DQ + E++Y+ + Sbjct: 439 CYGIGVSRTLAAVIEQHHDEAGIVWPKAVAPFDVHLLALNVKNEDQ--KTLAEQLYSDIR 496 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G DV +DD E+ G +F ADL+G P++V VG K + +E+K R TG + +++ E Sbjct: 497 QAGIDVLYDDRPERAGVKFKDADLIGLPVRVAVG-KRAGEGIIEVKVRKTGEQLELTASE 555 Query: 434 VINY 437 ++ + Sbjct: 556 LVRW 559 >gi|22298319|ref|NP_681566.1| prolyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] gi|81844949|sp|Q8DKT0|SYP_THEEB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|22294498|dbj|BAC08328.1| proline-tRNA ligase [Thermosynechococcus elongatus BP-1] Length = 602 Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 127/279 (45%), Positives = 169/279 (60%), Gaps = 19/279 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L++ P +AEI SHKL+LR G I + + GIYS+LPL + L V+AI+REE Sbjct: 1 MRLSQMLFVTLRDEPAEAEIPSHKLLLRAGYIRRIASGIYSYLPLMWRVLQKVSAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 NR+GA+E +P LQ A+LW ESGR+D+Y K M L DR + + GPTHEEV+T + Sbjct: 61 MNRSGALECLLPQLQPAELWQESGRWDTYTKAEGIMFSLTDRAQRQLGLGPTHEEVITAL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF K +Y M Sbjct: 121 AKDLIRSYRQLPVHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHADVASLKETYQVM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD---------FM 228 + +Y RI R GL + A+SG IGG SHEF+VLA GE +V + D + Sbjct: 181 YDTYSRILQRCGLTFRAVEADSGAIGGSGSHEFMVLAAAGEDEVLYTADGQYAANVEKAV 240 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 P + T + + +L++ P AAT D E+L Sbjct: 241 SLPPDAVPTTYKTVATLDT-------PNAATIDALVEQL 272 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 62/174 (35%), Positives = 98/174 (56%), Gaps = 1/174 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P +ARGIE+GHIF GTKYS M AT+ G++ + MG YGIG R+ A +E Sbjct: 427 PTQHLEAARGIEIGHIFQLGTKYSEAMKATYTNEQGEEVPLVMGCYGIGISRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD +GI+WP ++AP+++ ++ D A +Y +L G +V DD E+ G + Sbjct: 487 HHDAQGIVWPLAIAPYQVIIVVPNIGDAQQMQAATDLYEQLQAAGIEVLLDDRDERAGVK 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 F ADL+G P +++ G + +++ +VE+ R TG + + L EV+ Y + Sbjct: 547 FKDADLIGIPYRLVTG-RAIANGEVELIIRATGAKSTLPLTEVVRYLQKEIAQQ 599 >gi|167630335|ref|YP_001680834.1| prolyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] gi|226701294|sp|B0THP0|SYP_HELMI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167593075|gb|ABZ84823.1| prolyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] Length = 575 Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 114/240 (47%), Positives = 160/240 (66%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F P L+E P +AE+ SH+L+LR G I + S G+Y +LPLGQ+ L + AI+REE Sbjct: 1 MRMSRLFAPTLREIPAEAEVISHQLLLRAGFIRRSSAGVYHYLPLGQRVLQRIMAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E+ +P +Q A++W++SGR+ YG E+ RL DR+ + PTHEE +TD+ ++ Sbjct: 61 MNAAGGQELLMPIIQPAEIWLQSGRWHVYGDELFRLKDRHQRDFCLSPTHEESITDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SYR+LP Y I K+RDE RPRFG+MR REF+MKD YSFD G SY KM+ + Sbjct: 121 NVSSYRDLPMLLYHITNKYRDERRPRFGLMRGREFIMKDLYSFDRDEAGLHESYMKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTD 238 Y+ IF R GL P+ A+ G IGG SHEF+VLA++GE + V+C D D+ +E + Sbjct: 181 YVNIFRRCGLTFRPVEADPGAIGGTGGSHEFMVLAESGEAEIVYC--DACDYAANTEKAE 238 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 96/157 (61%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVG +F GTKYS ++ TF G+++ + MG YG+G R +AA IE +HD GI Sbjct: 402 ARGIEVGQVFKLGTKYSKALNCTFLDEKGQENLMVMGCYGVGVSRTMAAAIEQNHDDNGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP ++APF++ ++ + D +A E IY L G D DD E+ G +F ADL+ Sbjct: 462 VWPMAIAPFQVLVVPVSNKDAAQMEAAEAIYKELIAKGVDTLLDDRPERAGVKFKDADLI 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P+++ VG+K SD VE+K R G + S E+V+ Sbjct: 522 GIPVRITVGNKLASDGVVEVKLRRGGEQFTASREDVV 558 >gi|225849769|ref|YP_002730003.1| prolyl-tRNA synthetase [Persephonella marina EX-H1] gi|254782911|sp|C0QTI8|SYP_PERMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225645347|gb|ACO03533.1| prolyl-tRNA synthetase [Persephonella marina EX-H1] Length = 563 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P L+E P +AE+ SH ++R G I Q + G+Y +LPLG + L + IIR+ Sbjct: 1 MRASQYFIPTLKEAPAEAEVPSHIYLIRAGFIRQLAAGLYEYLPLGFRVLKKIEGIIRKY 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P L A+LW E+GR+D YGKE+ R+ DR + GPTHEE +TD+ R Sbjct: 61 MDDAGALEVLLPILAPAELWQETGRWDVYGKELFRVEDRKGRFFALGPTHEETITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SY++LP FYQIQ KFRDE RPR+G++R REF+MKDAYSFD++ E + SY M + Sbjct: 121 NIRSYKDLPKNFYQIQTKFRDEARPRYGLIRGREFIMKDAYSFDISEEMAVKSYEIMKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y +IF LGL + + A+ G IGG SHEF+V GE VFC Sbjct: 181 YKKIFDELGLDYLMVEADVGAIGGKYSHEFVVKVPNGEAHIVFC 224 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 100/157 (63%), Gaps = 1/157 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 G+EVGHIF GTKYS + A F DG++ + MG YGIG R++AA +E SHD GIIW Sbjct: 404 GLEVGHIFLLGTKYSEALKAYFVDKDGREKPIVMGCYGIGVSRLMAAAVEQSHDENGIIW 463 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P+++APFK+ ++ + D + E IY + + G +V +DD G++F ADL+G Sbjct: 464 PENIAPFKLHILALNIKDDQIKTVAEDIYTKAKEKGIEVLFDDRDISPGAKFKDADLIGI 523 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 P +++VG + V + KVEI+ R G +E++ + E+ N+ Sbjct: 524 PYRIVVG-RGVKNGKVEIQTRKDGKKEEIDINEIDNF 559 >gi|114777677|ref|ZP_01452637.1| prolyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] gi|114551893|gb|EAU54427.1| prolyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] Length = 572 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 113/218 (51%), Positives = 146/218 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F+P L++ P DAE+ SH+L+LR G I + + G+Y +LPL + L + AIIREE Sbjct: 1 MRYSNCFVPTLRDVPADAEVISHQLLLRAGYIRRVTSGVYDYLPLALRVLRRIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA E+ +P +Q +LW +SGR YG E+LR DR+ GPTHEEV+ D+ Sbjct: 61 MERAGAQELLMPMVQPTELWEKSGRLAKYGPELLRFEDRHAHQSCLGPTHEEVICDLMSR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E Y MF + Sbjct: 121 ELRSYKQLPLNLYQIQNKFRDEIRPRFGLMRGREFVMKDAYSFHADDESLMAEYRNMFDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ P+ A++G IGG SHEF VLAD+GE Sbjct: 181 YTRIFDRLGLRFRPVEADTGSIGGSDSHEFHVLADSGE 218 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 4/190 (2%) Query: 257 AATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A D+ + D P A RGIEVG +F G +Y+ PM F+ GK M Sbjct: 379 AQLVDLRETRAGDGCPRCGGTIALSRGIEVGQVFALGRRYTEPMEVVFQNQQGKREVATM 438 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R++AAV+E HD GI WPD +APF + L+++ D V +A +IY +L Sbjct: 439 GCYGIGVSRLMAAVVEQCHDDGGIAWPDVLAPFPVILVSMGKSDAVL-EASGEIYKQLQT 497 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV WD+ E+ G +F A+L+G PLQ+++G + + + E R + RE +++ +V Sbjct: 498 AGIDVLWDERNERPGVKFKDAELIGIPLQIVIGDRGLKEGVAEFGRRGSDRRE-VAIADV 556 Query: 435 INYASHRFSN 444 + A+ +N Sbjct: 557 VAMATTELAN 566 >gi|27365189|ref|NP_760717.1| prolyl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|81844691|sp|Q8DBH9|SYP_VIBVU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|27361336|gb|AAO10244.1| prolyl-tRNA synthetase [Vibrio vulnificus CMCP6] Length = 571 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 151/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPINLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG+ S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGNGSQEFHVLAESGEDLIAFSTE 226 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 104/159 (65%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ ++GK+ ++MG YGIG RVVAA IE ++D GII Sbjct: 407 RGIEVGHIFQLGNVYSEAMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNNDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P +++G + + + E K+R +G + +++ +++ + Sbjct: 527 GIPHTIVIGDRSMDEGHFEYKNRRSGEKTPVAMADIVEH 565 >gi|37680756|ref|NP_935365.1| prolyl-tRNA synthetase [Vibrio vulnificus YJ016] gi|81859846|sp|Q7MIE5|SYP_VIBVY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|37199505|dbj|BAC95336.1| prolyl-tRNA synthetase [Vibrio vulnificus YJ016] Length = 571 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 151/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPINLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG+ S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGNGSQEFHVLAESGEDLIAFSTE 226 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 104/159 (65%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ ++GK+ ++MG YGIG RVVAA IE ++D GII Sbjct: 407 RGIEVGHIFQLGNVYSEAMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNNDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P +++G + + + E K+R +G + +++ +++ Y Sbjct: 527 GIPHTIVIGDRSMDEGHFEYKNRRSGEKTPVAMADIVEY 565 >gi|320155572|ref|YP_004187951.1| prolyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] gi|319930884|gb|ADV85748.1| prolyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] Length = 571 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 151/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPINLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG+ S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGNGSQEFHVLAESGEDLIAFSTE 226 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 104/159 (65%), Gaps = 1/159 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ ++GK+ ++MG YGIG RVVAA IE ++D GII Sbjct: 407 RGIEVGHIFQLGNVYSEAMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNNDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P +++G + + + E K+R +G + +++ +++ + Sbjct: 527 GIPHTIVIGDRSMDEGHFEYKNRRSGEKTPVAMADIVEH 565 >gi|238926724|ref|ZP_04658484.1| proline--tRNA ligase [Selenomonas flueggei ATCC 43531] gi|238885256|gb|EEQ48894.1| proline--tRNA ligase [Selenomonas flueggei ATCC 43531] Length = 570 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 149/224 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + P L+ P +AEIASH+LM R G+I + + G+Y++LPL + + + IIREE Sbjct: 1 MRATNLYAPTLRNTPAEAEIASHQLMYRAGLIRKSAGGMYTYLPLAWRTIRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P LQ ++LW ESGR+ +YG EM+R+ DR+ + GPTHEE++T + R Sbjct: 61 MDAAGGQEIMMPILQPSELWEESGRWGAYGAEMIRVKDRHGREFCMGPTHEEMITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFGVMRSREF+MKD YSFD G SY KM V+ Sbjct: 121 EVRSYKQLPLMLYQIQDKFRDERRPRFGVMRSREFIMKDLYSFDKDIAGMNESYRKMSVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG IGG S EF VLA GE+++ C Sbjct: 181 YTNIFTRCGLNFRAVEADSGAIGGGHSEEFTVLAPEGESRIACC 224 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 61/146 (41%), Positives = 88/146 (60%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE G IF GTKYS M ATF GK +QMG YGIG R +AA IE +HD GI Sbjct: 404 GRGIEAGQIFALGTKYSKAMGATFLDEAGKTQPLQMGCYGIGVGRTMAAAIEQNHDEHGI 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP ++AP+++ ++ + A + E++Y L G DV DD E+ G +F DL+ Sbjct: 464 IWPRAIAPYEVVVVAVNAKAEEQLAYAEEVYEELRAAGVDVLLDDRRERAGVKFNDCDLI 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G+P+++ +G K + + +E+K R +G Sbjct: 524 GYPVRIAIGPKTIENGTIEVKIRKSG 549 >gi|154686074|ref|YP_001421235.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42] gi|166980099|sp|A7Z4S8|SYP_BACA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|154351925|gb|ABS74004.1| ProS [Bacillus amyloliquefaciens FZB42] Length = 564 Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 118/271 (43%), Positives = 168/271 (61%), Gaps = 5/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DAE SHKL+LR G I Q++ G+YS++PL + + N+ I+REE Sbjct: 1 MRQSLTLIPTLREVPADAEAKSHKLLLRAGFIRQNTSGVYSYMPLAYRVIQNIQKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P LQ A+ W ESGR+ +YG E++RL DR+ + G THEEV+T + R Sbjct: 61 MEKINAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRHGREFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E + +Y M+ + Sbjct: 121 EVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHASEESLEETYQNMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R L P+ A+SG +GG +HEF+ L++ GE + S D + NT+ Sbjct: 181 YSSIFARCELNVRPVIADSGAMGGKDTHEFMALSEIGEDTIAYS----DGSSYAANTEMA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +++ +NS T D N K + L Sbjct: 237 EVV-MNSEPSDETPEALEKIDTPNVKSIEEL 266 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 100/159 (62%), Gaps = 1/159 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GT+YS M+AT+ +G+ + MG YGIG R ++A+ E HD KG+ Sbjct: 403 AEGIEVGQVFKLGTRYSEAMNATYLDENGRAQPMLMGCYGIGVSRTLSAIAEQHHDEKGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAP+ + ++ + ++ ++ E++Y + G +V +DD E+ G +FA +DL+ Sbjct: 463 IWPKSVAPYDLHILALNMKNEAQKELAEQLYGKFQAEGYEVLYDDRAERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P+++ VG K + VE+K R TG ++S++E+ + Sbjct: 523 GLPIRITVG-KRADEGIVEVKIRKTGESAEVSVDELSEF 560 >gi|220906778|ref|YP_002482089.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7425] gi|254782895|sp|B8HNJ7|SYP_CYAP4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219863389|gb|ACL43728.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7425] Length = 613 Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 117/229 (51%), Positives = 152/229 (66%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + G+Y++LPL + L V+ I+R+E Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIGSGVYAYLPLMWRVLGKVSQIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P +Q A+LW ESGR+D+Y K M L DR D+ + GPTHEEV+T I Sbjct: 61 MNAAGAQECLLPQIQPAELWQESGRWDTYTKAEGIMFALTDRQDRQLGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I++YR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD E + +Y KM Sbjct: 121 ARDLIRTYRQLPQNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDADVESLRVAYGKM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y I R GLK + A+SG IGG S EF+VLAD GE +V ++D Sbjct: 181 HQAYCNILQRCGLKYRAVDADSGAIGGSGSQEFMVLADAGEDEVLYTED 229 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 98/164 (59%), Gaps = 1/164 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 PE +ARGIE+GHIF GTKYS M AT+ G++ + MG YGIG R+ A +E Sbjct: 438 PEQTLKTARGIEIGHIFQLGTKYSQAMGATYTNEQGEEVPLVMGCYGIGVSRLAQAAVEQ 497 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP++ ++ ++ +A ++Y L+ G + DD E+ G + Sbjct: 498 SYDKDGIIWPVAIAPYQAIVVIPNLNETTQVEAATQLYQDLNAAGIETLLDDRNERAGVK 557 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 F ADL+G P +++ G + ++ KVE+ R + +++L++VI Sbjct: 558 FKDADLIGIPYRIVTG-RSLAQGKVEVVQRASRSSTEIALDQVI 600 >gi|183221968|ref|YP_001839964.1| prolyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912036|ref|YP_001963591.1| prolyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226701304|sp|B0SDM9|SYP_LEPBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701305|sp|B0SM58|SYP_LEPBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167776712|gb|ABZ95013.1| Prolyl-tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780390|gb|ABZ98688.1| Prolyl-tRNA synthetase (Proline--tRNA ligase; ProRS) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 586 Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 108/224 (48%), Positives = 152/224 (67%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S Y +P +E+P+DA +ASHKLM+R G+I + + G+YS+LPLG + L + I+R+E Sbjct: 1 MKASSYLIPTAKEDPQDAVVASHKLMMRAGLIRKSAAGLYSYLPLGLRVLRKIEGIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G +E +P L +++W ESGR+D GKEM RL DR+D GPTHEE + + Sbjct: 61 MDKAGGLEFQLPILTPSEIWKESGRWDKMGKEMFRLKDRHDNESCLGPTHEESFCVLVKP 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY++LP YQI KFRDE+RPRFGV+RSREF MKDAYSF L E +Y M + Sbjct: 121 MVRSYKDLPINVYQIHTKFRDEIRPRFGVIRSREFTMKDAYSFHLDDESLDKTYQTMRKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFC 223 Y RIF +GL +IP++A+SG +GG S EF+V++ G ET C Sbjct: 181 YRRIFAGMGLTTIPVQADSGNMGGSASEEFMVVSPIGEETLTIC 224 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 89/164 (54%), Gaps = 5/164 (3%) Query: 261 DVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ K+ D P + +GIEVGHIF G KYS T GK MG YG Sbjct: 385 DISQAKVGDPCPSCGTGLTAEKGIEVGHIFKLGQKYSKAFDITVLNDKGKATTTTMGCYG 444 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGC 377 IG R +A VIE +D KGI WP S+APF + L++I K D + + E IY L + G Sbjct: 445 IGVNRCMATVIEQCNDEKGIFWPVSIAPFTVCLVSIAKNPDDIAK--IETIYKSLVESGI 502 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +V WDD G +F ++L+GFP+++ +G F+ +++ I R Sbjct: 503 EVLWDDRDLGPGFKFKDSELIGFPIRITLGKGFLEKNEITILDR 546 >gi|323498007|ref|ZP_08103016.1| prolyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] gi|323317052|gb|EGA70054.1| prolyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] Length = 571 Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 151/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ +G + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKDGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK+ ++MG YGIG RVVA+ IE +HD GII Sbjct: 407 RGIEVGHIFQLGKAYSEAMNCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R +G + +++ +++ + + + Sbjct: 527 GIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMTDIVEHVKAQLT 571 >gi|308173620|ref|YP_003920325.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|307606484|emb|CBI42855.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|328553448|gb|AEB23940.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens TA208] gi|328911761|gb|AEB63357.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens LL3] Length = 564 Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 111/243 (45%), Positives = 159/243 (65%), Gaps = 4/243 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DAE SHKL+LR G I Q++ G+YS++PL + + N+ I+REE Sbjct: 1 MRQSLTLIPTLREVPADAEAKSHKLLLRAGFIRQNTSGVYSYMPLAYRVIQNIQKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P LQ A+ W ESGR+ +YG E++RL DR+ + G THEEV+T + R Sbjct: 61 MEKINAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRHGREFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E + +Y M+ + Sbjct: 121 EVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHASEESLEETYQNMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R L P+ A+SG +GG +HEF+ L++ GE + S D + NT+ Sbjct: 181 YSSIFARCELNVRPVIADSGAMGGKDTHEFMALSEIGEDTIAYS----DGSSYAANTEMA 236 Query: 241 DII 243 +++ Sbjct: 237 EVV 239 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 100/159 (62%), Gaps = 1/159 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GT+YS M+AT+ +G+ + MG YGIG R ++A+ E HD KG+ Sbjct: 403 AEGIEVGQVFKLGTRYSEAMNATYLDENGRAQPMLMGCYGIGVSRTLSAIAEQHHDEKGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAP+ + ++ + ++ ++ EK+Y + G +V +DD E+ G +FA +DL+ Sbjct: 463 IWPKSVAPYDLHILALNMKNEAQKELAEKLYGKFQAEGYEVLYDDRAERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P+++ VG K + VE+K R TG ++S++E+ + Sbjct: 523 GLPIRITVG-KRADEGIVEVKIRKTGESAEVSVDELSEF 560 >gi|229544430|ref|ZP_04433488.1| prolyl-tRNA synthetase [Bacillus coagulans 36D1] gi|229324915|gb|EEN90592.1| prolyl-tRNA synthetase [Bacillus coagulans 36D1] Length = 569 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 117/272 (43%), Positives = 173/272 (63%), Gaps = 16/272 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L++ P +AE+ SH+L+LR G I Q + G+Y++LPL +K L + AIIREE Sbjct: 1 MKQSKLFIPTLRDVPAEAEVKSHQLLLRAGYIRQIASGVYTYLPLAKKVLHKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G++E+ +P+LQ A+LW ESGR+ SYG +++RL DR+++ GPTHEEV+T + R+ Sbjct: 61 LEAIGSMELLMPSLQPAELWQESGRWYSYGPDLMRLKDRHERDFALGPTHEEVITSLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP + YQIQ KFRDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 EVKSYKRLPLSLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHANKESLDETYKDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R L + A+SG IGG + EF+VL++ GE + S+++D+ Sbjct: 181 YTNIFSRCKLDFRAVLADSGAIGGKDTQEFMVLSEIGEDTIAY----------SDSSDYA 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 I + + +T P A EK + +P Sbjct: 231 ANIEMAEVKTVYTKPDEA------EKPLEKIP 256 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 88/264 (33%), Positives = 128/264 (48%), Gaps = 35/264 (13%) Query: 179 VSYLRIFHRLGLKSIPMR-------------AESGPIGGDLSHEFIVLADTGETQV---F 222 V+ +++ H LG ++I M GP+G + +LAD V Sbjct: 300 VNEVKVKHLLGSETIEMADPEAIKSIMGADPGSLGPVGA--PEQIRILADHAVRYVVNGI 357 Query: 223 CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS--AR 280 C + DF + N + D + L D+ N + D P+ K AR Sbjct: 358 CGANENDFHYVNANPERDYRVDL-------------YGDLRNIQEGDPSPDGKGTIRFAR 404 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVGHIF GTKYS M A F +G++ + MG YGIG R + AV E +D KG++W Sbjct: 405 GIEVGHIFKLGTKYSEAMHAAFLDENGREQVMLMGCYGIGVSRTLTAVCEQHNDDKGLVW 464 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P ++APF + L+ + D E ++A L K V DD E+ G +FA +DL+G Sbjct: 465 PVNLAPFDVHLVPVNMKDAQQSALAESLHAELEK-QFTVLMDDRNERPGVKFADSDLIGL 523 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTG 424 P++V VG K ++ VE+K R TG Sbjct: 524 PVRVTVGKK-AAEGIVEVKIRKTG 546 >gi|320593705|gb|EFX06114.1| prolyl-tRNA synthetase [Grosmannia clavigera kw1407] Length = 495 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 148/467 (31%), Positives = 232/467 (49%), Gaps = 51/467 (10%) Query: 2 RRSKYFLPILQENPRDAEI--ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 R +++++P Q +DA+ SH ++R G Q G++ LPLG + D + A++ + Sbjct: 45 RLTQFWVPPPQVALKDAKQNEESHAKLVRAGFFRQAHSGVFHMLPLGLRVQDKIEALVDK 104 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 GA +++ ++ SA LW SGR S E+ + DR + PTHEE +T++ Sbjct: 105 HMRSIGASRVALSSITSAGLWERSGRLGSVKPELFQFEDRKQAKFLLAPTHEEEITELVA 164 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 + SYR+LP YQI K+RDE+RPR+G++RSREF+MKD Y+FD T E + +Y ++ Sbjct: 165 QSVHSYRDLPLRLYQITRKYRDEMRPRYGILRSREFIMKDLYTFDTTVEAALATYEQVRA 224 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +Y IF L + RA SG +GGDLSHE+ + A GE V S F + NT+ Sbjct: 225 AYAAIFAELRVPVRVARASSGDMGGDLSHEYHLAASLGEDDV-ASCRACGF---AGNTEI 280 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA----RGIEVGHIFYFGTKYS 295 I D + D P+ + R IE+GH FY GT+YS Sbjct: 281 THI----------------GPDSRPARSGDDCPDCGAAGSLQVERAIELGHTFYLGTRYS 324 Query: 296 LPMSATFKGADGKDHYVQ----MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 P++ +G MG YGIG R++ AV + D G+ WP ++APF++++ Sbjct: 325 EPLNVRVQGDQNTPATSTITPLMGCYGIGISRILGAVADHLADPTGLRWPRAIAPFEVAV 384 Query: 352 INIKAHDQVCRDACEKIYARL---SKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVG 407 + A E++Y L ++ D DD + + ADL G+P+ VIVG Sbjct: 385 --VAAGGSPLAQVAERVYDELTANTETRLDALLDDRPAASLPYKLKDADLTGYPVVVIVG 442 Query: 408 SKF------VSDSK---------VEIKHRLTGIREDMSLEEVINYAS 439 + + +DS E++ R G+R+D+ L E+ + S Sbjct: 443 AAWRRSTATATDSSAPNISLDGLCEVQCRQLGLRQDVPLSELKTFVS 489 >gi|256827500|ref|YP_003151459.1| prolyl-tRNA synthetase, family II [Cryptobacterium curtum DSM 15641] gi|256583643|gb|ACU94777.1| prolyl-tRNA synthetase, family II [Cryptobacterium curtum DSM 15641] Length = 588 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 106/225 (47%), Positives = 160/225 (71%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S ++P L+E P DA+IASH+L+LR GM+ + + G Y++LPLG + + + I+REE Sbjct: 5 IRMSALYVPTLKEVPTDADIASHQLLLRAGMMRKSATGAYTYLPLGWRVIRKIERIVREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E+ +P +Q A+LW ESGR++ YG E++R+ DR+ + GPTHEE++T + R+ Sbjct: 65 MDAIGSQEIMMPVIQPAELWHESGRWNDYGPELMRMDDRHGHGLCLGPTHEELITALVRN 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE+RPRFG+MRSREF+MKDAYSF + E + +Y++M + Sbjct: 125 ELRSYKQLPVILYQIQSKFRDEIRPRFGLMRSREFIMKDAYSFHASKESLQKTYDEMSAA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CS 224 Y RI R+GL P+ A++G IGG ++ E+ LAD GE ++ CS Sbjct: 185 YARICERVGLVYRPVEADAGQIGGSVTCEYHALADAGEAELASCS 229 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 2/176 (1%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D PE + RGIEVG +F G KYS M ATF DG + MG Y Sbjct: 381 ADLCTIKAGDVCPECGELVEITRGIEVGQVFQLGDKYSRAMGATFMAEDGSEQPFLMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+G R +AAV+E +D GI WP SVAP ++ ++ + D+ A E + L+ +G Sbjct: 441 GVGVSRTMAAVVEQHNDEYGIKWPLSVAPAQVCILPLAVGDEEVEPAAEALAHELAGMGL 500 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +V DD E+ G +FA ADLLG+PLQ+I+G + + + E+K+R TG + ++++E Sbjct: 501 EVVIDDRKERPGVKFAEADLLGWPLQIIIGKRGLDAGEYELKNRSTGAKRTIAIDE 556 >gi|167517909|ref|XP_001743295.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778394|gb|EDQ92009.1| predicted protein [Monosiga brevicollis MX1] Length = 421 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 135/392 (34%), Positives = 208/392 (53%), Gaps = 29/392 (7%) Query: 24 KLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVES 83 +L+++ G I Q S G+Y LPL ++ L + ++R E + GA E+S+ TL DLW S Sbjct: 6 QLLVQAGYIAQSSSGMYHMLPLAKRVLGKLENLVRAEMSAIGAQEISLSTLTGKDLWTHS 65 Query: 84 GRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDEL 143 GR+D+ E+ R+ DR PTHEE +T + +S+++S RN+P YQ+ K+RDEL Sbjct: 66 GRWDTVSSELFRVEDRRGAVYCLAPTHEEAITTLAKSYVRSARNMPLYLYQLDRKYRDEL 125 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 RPR G++R REF MKD Y+FD+ + ++ +Y + +Y +F L + + + A++G IG Sbjct: 126 RPRSGLLRGREFYMKDLYTFDVDEQAARLTYESVVKAYHNLFTHLHVPYVAVEADTGAIG 185 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 G +SHEF VLA GE V D + + E T P A T Sbjct: 186 GSMSHEFQVLAPVGEDSVTV----------CHTCDRAANLEVMPGSEAGTTPVAPTDHCQ 235 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E S GIEVGH F G KYS T+ G + MG YG+G R Sbjct: 236 FE------------SHAGIEVGHTFLLGHKYSSMFDVTYDSPSGPE-LAFMGCYGLGTSR 282 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSK-VGCDVF 380 ++AAV E+ G+ WP S+AP+++++I + A +D + A + +L++ + DV Sbjct: 283 ILAAVTEALASENGLRWPLSLAPYRVAVITLGASRNDNI-ESAATCLTEQLNEAMPGDVL 341 Query: 381 WDD--MGEQIGSQFAVADLLGFPLQVIVGSKF 410 DD + + + A L+G P V+VGS++ Sbjct: 342 LDDRCVDLSLRQKIATMRLIGVPYVVVVGSRY 373 >gi|292670562|ref|ZP_06603988.1| proline-tRNA ligase [Selenomonas noxia ATCC 43541] gi|292647728|gb|EFF65700.1| proline-tRNA ligase [Selenomonas noxia ATCC 43541] Length = 570 Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 109/224 (48%), Positives = 149/224 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + P L+ P +AEIASH+LM R G+I + + G+Y++LPL + + + IIR E Sbjct: 1 MRATNLYAPTLRNTPAEAEIASHRLMYRAGLIRKSAGGMYTYLPLAWRTIRKIEEIIRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ +P LQ ++LW ESGR+ +YG EM+R+ DR+D+ GPTHEE++T + R Sbjct: 61 MEAVGGQEIMMPILQPSELWEESGRWGAYGAEMIRIKDRHDREFCMGPTHEEMITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MRSREF+M+D YSFD EG SY KM+ + Sbjct: 121 ELRSYKQLPVLLYQIQDKFRDERRPRFGIMRSREFIMQDLYSFDEDIEGMNESYRKMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG IGG S EF VLA GE+++ C Sbjct: 181 YSNIFTRCGLDFRVVEADSGAIGGGRSEEFTVLAPEGESRIACC 224 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 94/164 (57%), Gaps = 8/164 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RGIE G IF GTKYS M ATF A GK +QMG YGIG R +AA IE +HD GI Sbjct: 404 SRGIEAGQIFALGTKYSEAMDATFLDAAGKAQPLQMGCYGIGVGRTMAAAIEQNHDDSGI 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP ++AP+++ ++ + A E++Y L G D DD E+ G +F DL+ Sbjct: 464 IWPRAIAPYEVVVVAVNAKVPEQLAYAEEVYEELRAAGVDALLDDRRERAGVKFNDCDLI 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G+P+++ VG K + +E+K R TG E++N+A + Sbjct: 524 GYPVRIAVGPKTIESGSIEVKLRRTG--------ELVNFARDTY 559 >gi|167627536|ref|YP_001678036.1| prolyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189083499|sp|B0TXX4|SYP_FRAP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167597537|gb|ABZ87535.1| prolyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 565 Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 107/230 (46%), Positives = 158/230 (68%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+P+G K L + I+REE Sbjct: 1 MKATQTLIATTKELPKEAVLTSHQYMLKAGLIKKLASGIYTWMPIGLKVLQKIQNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSVLPSELLQETHRWDKFGPELLKLKDRHERDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF E ++YNKM + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSECLHNTYNKMHET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P+RA++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 181 YCNILDKIGLVYRPVRADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDY 229 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 3/180 (1%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+N GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDNNGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+++AP++++++ I + + + +K+Y L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPETIAPYQVAILPINYNKSESVKQTADKLYQELLVKG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+GF V++G + + VE K+R T ++++ LE++ + Sbjct: 503 IDVILDDRGARPGVMFADADLIGFSHHVVIGDRLLEQGLVEYKNRKTQEKQEIRLEKLFD 562 >gi|148979813|ref|ZP_01815720.1| prolyl-tRNA synthetase [Vibrionales bacterium SWAT-3] gi|145961607|gb|EDK26907.1| prolyl-tRNA synthetase [Vibrionales bacterium SWAT-3] Length = 572 Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 149/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHSRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCNAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 64/165 (38%), Positives = 108/165 (65%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK+ ++MG YGIG RVVA+ IE +HD GII Sbjct: 407 RGIEVGHIFQLGNVYSQAMNCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDIELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R G +E ++++ ++ + + +F+ Sbjct: 527 GIPHTIVIGDRSMKEGNFEYKNRRAGTKEAVAIDSIVEHVTSQFA 571 >gi|28899107|ref|NP_798712.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|260364768|ref|ZP_05777355.1| proline--tRNA ligase [Vibrio parahaemolyticus K5030] gi|260876810|ref|ZP_05889165.1| proline--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|260895895|ref|ZP_05904391.1| proline--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|81839761|sp|Q87MC3|SYP_VIBPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|28807331|dbj|BAC60596.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|308089375|gb|EFO39070.1| proline--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|308091476|gb|EFO41171.1| proline--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|308115298|gb|EFO52838.1| proline--tRNA ligase [Vibrio parahaemolyticus K5030] gi|328474355|gb|EGF45160.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 10329] Length = 571 Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 149/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLAD+GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLADSGEDLIAFSTE 226 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 106/164 (64%), Gaps = 1/164 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ + G DGK+ ++MG YGIG RVVA+ IE +HD GII Sbjct: 407 RGIEVGHIFQLGNVYSEAMNCSVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDIELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P +++G + + + E K+R TG + +++ +++ + + Sbjct: 527 GIPHTIVIGDRSMDEGNFEYKNRRTGEKTPVAMADIVEHVKSQL 570 >gi|153836755|ref|ZP_01989422.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] gi|260900371|ref|ZP_05908766.1| proline--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|149749901|gb|EDM60646.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] gi|308108556|gb|EFO46096.1| proline--tRNA ligase [Vibrio parahaemolyticus AQ4037] Length = 571 Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 149/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLAD+GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLADSGEDLIAFSTE 226 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 105/164 (64%), Gaps = 1/164 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ + G DGK+ ++MG YGIG RVVA+ IE +HD GII Sbjct: 407 RGIEVGHIFQLGNVYSEAMNCSVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++ EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSERVKEEAEKLYAELTAMGIEVLFDDRKERPGVMFSDIELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P +++G + + + E K+R TG + +++ +++ + + Sbjct: 527 GIPHTIVIGDRSMDEGNFEYKNRRTGEKTPVAMADIVEHVKSQL 570 >gi|261253697|ref|ZP_05946270.1| prolyl-tRNA synthetase [Vibrio orientalis CIP 102891] gi|260937088|gb|EEX93077.1| prolyl-tRNA synthetase [Vibrio orientalis CIP 102891] Length = 571 Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 149/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKSGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 105/165 (63%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK+ ++MG YGIG RVVA+ IE +HD GII Sbjct: 407 RGIEVGHIFQLGNTYSQAMNCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R G + +++ +++ + + + Sbjct: 527 GIPHTIVIGDRSMKEGNFEYKNRRNGEKTAVAMADIVEHIKAQLA 571 >gi|237752688|ref|ZP_04583168.1| prolyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] gi|229376177|gb|EEO26268.1| prolyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] Length = 582 Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+P +E P+D + SH+ ++R G I Q GIY++LPLG++ LD + +I++EE Sbjct: 1 MRFSKIFIPTFKEAPKDVVLKSHEYLIRGGFIQQIGSGIYNFLPLGKRVLDKIKSIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+++ + A+LW +SGR++ YGKE+LR DR D A + GPTHEEV+T++ ++ Sbjct: 61 MDNAGANEVTLGFVTPANLWQKSGRFERYGKELLRFNDRKDNAFVLGPTHEEVITELVKA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP YQI LKFRDE+RPRFG+MR+REF+MKD YSF E K ++ M + Sbjct: 121 NVKSYKQLPLHLYQINLKFRDEMRPRFGLMRAREFIMKDGYSFHSNFEDLKREFDLMEQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +IF RLGL + A+SG IGG S EF+VLA++GE + C D Sbjct: 181 YSKIFTRLGLDFRAVFADSGAIGGSGSKEFMVLANSGEDTI-CVCD 225 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 61/156 (39%), Positives = 89/156 (57%), Gaps = 1/156 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIE GHIF GTKYS M ATF GK MG YGIG R+++A+IE HD KG+I Sbjct: 414 KGIEAGHIFQLGTKYSSAMDATFLDESGKAQPFIMGCYGIGVSRLLSAIIEQHHDKKGMI 473 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D + EKIY L+K G + DD E+ G++ A +L+G Sbjct: 474 WTQATAPFDVDIMVSNIKDSAQLEMGEKIYTALNKEGIECLLDDRAERYGAKIADFELIG 533 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 FP +I+G K + ++E+ R RE + + + + Sbjct: 534 FPFGIIIG-KGLEKGEIELVRRKDLSREVLKVSDFM 568 >gi|91223451|ref|ZP_01258716.1| prolyl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|269966231|ref|ZP_06180320.1| prolyl-tRNA synthetase [Vibrio alginolyticus 40B] gi|91191537|gb|EAS77801.1| prolyl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|269829146|gb|EEZ83391.1| prolyl-tRNA synthetase [Vibrio alginolyticus 40B] Length = 571 Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 110/218 (50%), Positives = 147/218 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMRSREF M DAYSFD+ +G + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRSREFSMMDAYSFDIDKDGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y + F R+GL P+ A+SG IGG S EF VLA++GE Sbjct: 181 YCKAFDRMGLDYRPVLADSGAIGGSGSQEFHVLAESGE 218 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 105/164 (64%), Gaps = 1/164 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGNAYSAAMNCGVLGPDGKNVILEMGCYGIGITRVVAAAIEQNHDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P +I+G + + + E K+R TG + +++ +++ + + Sbjct: 527 GVPHTIIIGDRSMKEGNFEYKNRATGEKTAVAMTDIVEHVKAQL 570 >gi|323495331|ref|ZP_08100409.1| prolyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] gi|323310402|gb|EGA63588.1| prolyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] Length = 571 Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 149/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S + Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTE 226 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK+ ++MG YGIG RVVA+ IE +HD GII Sbjct: 407 RGIEVGHIFQLGNTYSEAMNCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R +G + +++ +++ + + + Sbjct: 527 GVPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMADIVEHVKAQLA 571 >gi|254421628|ref|ZP_05035346.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7335] gi|196189117|gb|EDX84081.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7335] Length = 597 Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 115/219 (52%), Positives = 151/219 (68%), Gaps = 3/219 (1%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L+E+P +AEI SHKL+LR G + + + G+Y++LPL Q+ LD V+AI+REE N TGA E Sbjct: 6 LREDPAEAEIPSHKLLLRAGYMRRIASGLYAYLPLLQRVLDKVSAIVREEMNATGAQECL 65 Query: 71 VPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 +P LQ A LW ESGR+D+Y K M L DR D+ + GPTHEEV+T I R I+SY+ Sbjct: 66 LPQLQPASLWKESGRWDTYTKAEGIMFSLGDRRDQELALGPTHEEVITAIARDMIRSYKQ 125 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF E K +Y++M+ +Y I R Sbjct: 126 LPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTDAESLKATYDQMYRTYSNILRR 185 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 GL + A+SG IGG S EF+VLA+ GE +V ++D Sbjct: 186 TGLAFRAVEADSGAIGGSGSTEFMVLAEAGEDEVLYTED 224 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 98/161 (60%), Gaps = 5/161 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIE+GHIF G KYS + AT+ GK+ ++MG YG+G R+ A +E S+D G Sbjct: 428 TARGIEIGHIFQLGHKYSEALGATYTSEQGKEVPLEMGCYGVGVSRLAQAAVEQSYDKNG 487 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP+ ++ NI DQ+ A +++Y L+ G + DD E+ G +F A Sbjct: 488 IIWPVAIAPYHAIVVVPNIGDDDQMA--AAKQLYDDLNSAGVETLLDDRKERAGVKFKDA 545 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +L+G P +V+ G + + KVE+ R G E+++L+E ++ Sbjct: 546 ELVGIPFRVVTG-RSLKQGKVEVAKRANGEVEEIALDEAVH 585 >gi|315302972|ref|ZP_07873693.1| prolyl-tRNA synthetase [Listeria ivanovii FSL F6-596] gi|313628661|gb|EFR97073.1| prolyl-tRNA synthetase [Listeria ivanovii FSL F6-596] Length = 538 Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 114/224 (50%), Positives = 148/224 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + AIIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLTLRKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR+ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAVGAAELLMPALQPAELWQESGRWSDYGPELMRLKDRAARDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E Y+ M + Sbjct: 121 EIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASNESLDEVYDLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL+ + A+SG IGG + EF+ L++ GE + S Sbjct: 181 YSNIFSRCGLEFRSVIADSGSIGGKETKEFMALSEIGEDTIAYS 224 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 84/133 (63%), Gaps = 4/133 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G+ Sbjct: 403 AEGIEVGHIFKLGTKYSQAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGL 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L + G V DD GE+ G +FA AD Sbjct: 463 VWDKKISPFDLHLIPVNMKSEEQVA--FAETLYVSLQQAGYSVLIDDRGERAGVKFADAD 520 Query: 397 LLGFPLQVIVGSK 409 L+G PL++ VG K Sbjct: 521 LIGLPLRITVGKK 533 >gi|241668104|ref|ZP_04755682.1| prolyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876639|ref|ZP_05249349.1| prolyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842660|gb|EET21074.1| prolyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 565 Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 106/230 (46%), Positives = 158/230 (68%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+P+G K L + I+REE Sbjct: 1 MKATQTLIATTKELPKEAVLTSHQYMLKAGLIKKLASGIYTWMPIGLKVLQKIQNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSVLPSELLQETHRWDKFGPELLKLKDRHERDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + ++YNKM + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLHNTYNKMHET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P+RA++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 181 YCNILDKIGLVYRPVRADTGAIGGDNSHEFQVLANAGE-DIICYSNSSDY 229 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 105/180 (58%), Gaps = 3/180 (1%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+N GIEVGHIF YS PM+A DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDNNGTLELTNGIEVGHIFELEDVYSKPMNANIISQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+++AP++++++ I + + + +K+Y L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPEAIAPYQVAILPINYNKSESVKQTADKLYQELLAKG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+G+ V++G + + +E K+R T +++++LE++++ Sbjct: 503 IDVILDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITLEKLLD 562 >gi|304440717|ref|ZP_07400601.1| proline--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370904|gb|EFM24526.1| proline--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 582 Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 113/257 (43%), Positives = 161/257 (62%), Gaps = 15/257 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K ++P L+E P DAE+ SHKL+LR MI + + GIYS+LPLG + + + I+REE Sbjct: 1 MRLTKLYMPTLREVPTDAEVESHKLLLRAAMIRRSTTGIYSYLPLGYRVVRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + +Q A++W ESGR+D +G EM +L DRN + GPT EE T + + Sbjct: 61 MDRAGSQEILMSAIQPAEIWEESGRWDKFGPEMFKLVDRNGRDFCLGPTAEEYFTTLVKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE RPRFG+ R+REFLMKDAYSFD EG + SY+ + + Sbjct: 121 EVSSYKQLPLNIYQIQTKYRDEKRPRFGINRAREFLMKDAYSFDKDEEGLQKSYDMYYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK--------------- 225 Y +F RL L + ++G +GG +SHEFI L++TGE +F S+ Sbjct: 181 YQNVFDRLSLDYKIVEGDNGAMGGHMSHEFIALSETGEGIIFYSENSDKAYTEEKAPVHY 240 Query: 226 DFMDFPIPSENTDFDDI 242 DF+D P E + + I Sbjct: 241 DFVDTSEPLEKEEVETI 257 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/172 (41%), Positives = 102/172 (59%), Gaps = 7/172 (4%) Query: 269 DSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D +P V + RGIEVG+IF GTKYS + ATF +GK Y MGSYGIG R V+ Sbjct: 391 DKIPGTDEVYKTRRGIEVGNIFQLGTKYSEALDATFLDENGKSQYFVMGSYGIGVTRSVS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 AV+E HD GI+WP ++AP++ I+++N K +Q+ + EK++A L +G +V DD Sbjct: 451 AVVEQYHDDHGIVWPMAIAPYQIIITVMNPKKEEQL--ELGEKLHAALVNMGYEVLLDDR 508 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G +F DL+G PL++ VG K DS VE R +M+ +E I+ Sbjct: 509 NVGAGVKFNDRDLIGIPLRITVGKK-AQDSIVEFSRRDNRENIEMTSKEAID 559 >gi|304436529|ref|ZP_07396502.1| proline--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370472|gb|EFM24124.1| proline--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 569 Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 148/224 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + P L+ P +AEIASH+LM R G+I + + G+Y++LPL + + + IIREE Sbjct: 1 MRATNLYAPTLRNTPAEAEIASHQLMYRAGLIRKSAGGMYTYLPLAWRTIRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P LQ ++LW ESGR+ +YG EM+ + DR+ + GPTHEE++T + R Sbjct: 61 MDAAGGQEIMMPILQPSELWEESGRWGAYGAEMICVKDRHGREFCMGPTHEEMITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFGVMRSREF+MKD YSFD G SY KM V+ Sbjct: 121 EVRSYKQLPLMLYQIQDKFRDERRPRFGVMRSREFIMKDLYSFDKDIAGMNESYRKMAVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + A+SG IGG S EF VLA GE+++ C Sbjct: 181 YTNIFTRCGLNFRAVEADSGAIGGGHSEEFTVLAPEGESRIACC 224 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/146 (42%), Positives = 88/146 (60%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE G IF GTKYS M ATF GK +QMG YGIG R +AA IE +HD GI Sbjct: 403 GRGIEAGQIFALGTKYSEAMGATFLDESGKTQPLQMGCYGIGVGRTMAAAIEQNHDAHGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP ++AP+++ ++ + A + E+IY L G DV DD E+ G +F DL+ Sbjct: 463 IWPRAIAPYEVVVVAVNAKVEEQLAYAEEIYEELRAAGVDVLLDDRRERAGVKFNDCDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G+P+++ +G K + + +E+K R +G Sbjct: 523 GYPVRIAIGPKTIENGTIEVKIRQSG 548 >gi|208779640|ref|ZP_03246985.1| prolyl-tRNA synthetase [Francisella novicida FTG] gi|208744601|gb|EDZ90900.1| prolyl-tRNA synthetase [Francisella novicida FTG] Length = 565 Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLNDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDY 229 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 72/180 (40%), Positives = 106/180 (58%), Gaps = 5/180 (2%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKV 375 G G RV+AA IE SHD GIIWP+S+AP+++++ IN D+V ++ +K+Y L Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKV-KEVADKLYQDLLGD 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 502 GIDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQELIEYKNRKTQEKQEITIAELI 561 >gi|254229498|ref|ZP_04922912.1| prolyl-tRNA synthetase [Vibrio sp. Ex25] gi|262393498|ref|YP_003285352.1| prolyl-tRNA synthetase [Vibrio sp. Ex25] gi|151937963|gb|EDN56807.1| prolyl-tRNA synthetase [Vibrio sp. Ex25] gi|262337092|gb|ACY50887.1| prolyl-tRNA synthetase [Vibrio sp. Ex25] Length = 571 Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 110/218 (50%), Positives = 147/218 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMRSREF M DAYSFD+ +G + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRSREFSMMDAYSFDIDKDGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y + F R+GL P+ A+SG IGG S EF VLA++GE Sbjct: 181 YCKAFDRMGLDYRPVLADSGAIGGSGSQEFHVLAESGE 218 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 105/164 (64%), Gaps = 1/164 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 407 RGIEVGHIFQLGNAYSAAMNCGVLGPDGKNVILEMGCYGIGITRVVAAAIEQNHDKYGII 466 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F+ +L+ Sbjct: 467 WPDAIAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P +I+G + + + E K+R TG + +++ ++I + + Sbjct: 527 GVPHTIIIGDRSMKEGNFEYKNRATGEKTPVAMTDIIEHVKAQL 570 >gi|56708459|ref|YP_170355.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670930|ref|YP_667487.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|224457616|ref|ZP_03666089.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|254371083|ref|ZP_04987085.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254875304|ref|ZP_05248014.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|81820763|sp|Q5NF37|SYP_FRATT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|123359400|sp|Q14GJ0|SYP_FRAT1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56604951|emb|CAG46045.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321263|emb|CAL09428.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|151569323|gb|EDN34977.1| hypothetical protein FTBG_00840 [Francisella tularensis subsp. tularensis FSC033] gi|254841303|gb|EET19739.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159660|gb|ADA79051.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis NE061598] Length = 565 Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDY 229 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 71/180 (39%), Positives = 106/180 (58%), Gaps = 5/180 (2%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKV 375 G G RV+AA IE SHD GIIWP+S+AP+++++ IN D++ ++ +K+Y L Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKI-KEVADKLYQDLLGD 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 502 GIDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELI 561 >gi|225849003|ref|YP_002729167.1| prolyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644474|gb|ACN99524.1| prolyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] Length = 563 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 107/225 (47%), Positives = 151/225 (67%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M S+YF+P L+ENP +A++ SH ++R G I + GIY +LPLG + L + IIR+ Sbjct: 1 MLASRYFMPTLKENPSEAQVPSHIYLIRGGFIRSLAAGIYEYLPLGFRVLKKIENIIRKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P L A+LW E+GR+D YGKE+ RL DR D GPTHEE +TD+ R Sbjct: 61 MDEAGALELLLPILTPAELWKETGRWDVYGKELFRLKDRKDADFALGPTHEETITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP FYQIQ KFRDE RPR+G++R REF+MKD YSFD++ E + +Y M + Sbjct: 121 NVRSYKDLPLNFYQIQTKFRDEARPRYGLIRGREFIMKDGYSFDVSEEDAIKTYEVMKET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 Y +IF L L + + A+ G IGG SHEF+V +GE V+C Sbjct: 181 YHKIFQDLKLDYLMVEADVGAIGGKFSHEFVVKVPSGEAHIVYCE 225 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 121/227 (53%), Gaps = 23/227 (10%) Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI---ISLNSIVEQWTAPY 256 GP+G DL + AD + K+ +F + + D+ I + + VE++ Sbjct: 332 GPMGLDLP----IYAD------YSIKELYNFVVGANEKDYHYINVNLGRDVKVEEFY--- 378 Query: 257 AATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ K D P +N G+EVGHIF GTKYS M A F DGK+ + M Sbjct: 379 ----DLATAKEGDPCPVCKNPLKETTGLEVGHIFLLGTKYSQAMKAYFTDKDGKEKPIIM 434 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R+++A++E HD KGIIWPD VAPF + ++ + D+ A +IY + + Sbjct: 435 GCYGIGVSRLISAIVEQYHDDKGIIWPDVVAPFDLHILVLNVKDEKSLKAGFEIYEKAKR 494 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV D+ GS+F ADL+G P ++++G K +++ KVE + R Sbjct: 495 QGLDVLLDERDISPGSKFKDADLIGIPNRIVIG-KSLNEGKVEYQRR 540 >gi|254368866|ref|ZP_04984879.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] gi|157121787|gb|EDO65957.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] Length = 565 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDY 229 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/179 (37%), Positives = 103/179 (57%), Gaps = 3/179 (1%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+S+AP++++++ I + ++ +K+ L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSAKVKEVADKLCQDLLGDG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 503 IDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELI 561 >gi|57234857|ref|YP_181114.1| prolyl-tRNA synthetase [Dehalococcoides ethenogenes 195] gi|114152187|sp|Q3Z9I5|SYP_DEHE1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|57225305|gb|AAW40362.1| prolyl-tRNA synthetase [Dehalococcoides ethenogenes 195] Length = 569 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 107/226 (47%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F +E P DAE SH+L+LR+GMI Q + G+YS++PL +++ + IIR+E Sbjct: 1 MRYSRLFGKTQREIPSDAETISHQLLLRSGMIAQLTAGVYSFMPLAWRSIQKIENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++G E+++P LQ ++W +SGR +G+ + L DR D+ ++ GPTHEEV+TD+ Sbjct: 61 MNKSGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKDRNLVLGPTHEEVITDLASR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SYR+LP YQIQ KFRDE RPR G++R REF+MKD YSFD +PEG SY M + Sbjct: 121 YIQSYRDLPQRLYQIQTKFRDEPRPRGGLIRVREFIMKDMYSFDASPEGLDESYQTMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y ++ R GL+S+ + A+SG IGG SHEF+++A++GE ++C K Sbjct: 181 YENVYRRCGLESMVIDADSGAIGGKASHEFMIVAESGEDSIIYCPK 226 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 89/159 (55%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 S RG+EVGHIF GT S A F A+G H + MG YG+G R++AA IE +HD K Sbjct: 398 ASKRGVEVGHIFKLGTFLSERFGANFTDAEGISHPIIMGCYGMGVGRLLAAAIEQNHDEK 457 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 GIIWP +AP++I + + + A EKIY L G +V +DD G +F AD Sbjct: 458 GIIWPMPIAPYQIYICGLFLDNPAVSQAAEKIYTELEAQGVEVLFDDRELTAGVKFNDAD 517 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG PL++ + + + VE+K R E + LE ++ Sbjct: 518 LLGIPLRLTISPRNLDKGGVELKLRRNKESELVPLESIM 556 >gi|89256041|ref|YP_513403.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|115314517|ref|YP_763240.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica OSU18] gi|156502051|ref|YP_001428116.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010208|ref|ZP_02275139.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC200] gi|290953930|ref|ZP_06558551.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|295312679|ref|ZP_06803424.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|114152197|sp|Q2A4E9|SYP_FRATH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|122325457|sp|Q0BMT1|SYP_FRATO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980124|sp|A7NB07|SYP_FRATF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|89143872|emb|CAJ79090.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|115129416|gb|ABI82603.1| proline--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|156252654|gb|ABU61160.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 565 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDY 229 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 71/180 (39%), Positives = 105/180 (58%), Gaps = 5/180 (2%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKV 375 G G RV+AA IE SHD GIIWP+S+AP+++++ IN D+V ++ +K+ L Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKV-KEVADKLCQDLLGD 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 502 GIDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELI 561 >gi|187931393|ref|YP_001891377.1| prolyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] gi|226701291|sp|B2SFQ6|SYP_FRATM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|187712302|gb|ACD30599.1| prolyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] Length = 565 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDY 229 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 73/180 (40%), Positives = 106/180 (58%), Gaps = 5/180 (2%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDCKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKV 375 G G RV+AA IE SHD GIIWP+S+AP+++++ IN D+V ++ +K+Y L Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKV-KEVADKLYQDLLGD 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA ADL+G+ V++G K + +E K+R T ++++++ E+I Sbjct: 502 GIDVLLDDRGARPGVMFADADLIGYSHHVVIGDKLLEQGLIEYKNRKTQEKQEITIAELI 561 >gi|270307741|ref|YP_003329799.1| prolyl-tRNA synthetase [Dehalococcoides sp. VS] gi|270153633|gb|ACZ61471.1| prolyl-tRNA synthetase [Dehalococcoides sp. VS] Length = 569 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 107/226 (47%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F +E P DAE SH+L+LR+GMI Q + G+YS++PL +++ + IIR+E Sbjct: 1 MRYSRLFGKTQREIPSDAETISHQLLLRSGMIAQLTAGVYSFMPLAWRSIQKIENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++G E+++P LQ ++W +SGR +G+ + L DR D+ ++ GPTHEEV+TD+ Sbjct: 61 MNKSGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKDRNLVLGPTHEEVITDLASR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SYR+LP YQIQ KFRDE RPR G++R REF+MKD YSFD +PEG SY M + Sbjct: 121 YIQSYRDLPQRLYQIQTKFRDEPRPRGGLIRVREFIMKDMYSFDASPEGLDESYQTMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 Y ++ R GL+S+ + A+SG IGG SHEF+++A++GE + ++C K Sbjct: 181 YESVYRRCGLESMVIDADSGAIGGKASHEFMIVAESGEDSIIYCPK 226 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 89/159 (55%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 S RG+EVGHIF GT S A F A+G H + MG YG+G R++AA IE +HD K Sbjct: 398 ASKRGVEVGHIFKLGTFLSERFGANFTDAEGISHPIIMGCYGMGVGRLLAAAIEQNHDEK 457 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 GIIWP +AP+++ + + A EK+YA L G +V +DD G +F AD Sbjct: 458 GIIWPMPIAPYQVYICGLFLDKPAVSQAAEKMYAELEAQGVEVLFDDRELTAGVKFNDAD 517 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG PL++ + + + VE+K R E + L+ ++ Sbjct: 518 LLGIPLRLTISPRNLDKGGVELKLRRNKEAELVPLDNIV 556 >gi|134301543|ref|YP_001121511.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|166980125|sp|A4IWT9|SYP_FRATW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|134049320|gb|ABO46391.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] Length = 565 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDY 229 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 71/180 (39%), Positives = 106/180 (58%), Gaps = 5/180 (2%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKV 375 G G RV+AA IE SHD GIIWP+S+AP+++++ IN D++ ++ +K+Y L Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKI-KEVADKLYQDLLGD 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 502 GIDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELI 561 >gi|332678669|gb|AEE87798.1| Prolyl-tRNA synthetase Bacterial type [Francisella cf. novicida Fx1] Length = 565 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDY 229 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 72/180 (40%), Positives = 106/180 (58%), Gaps = 5/180 (2%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKV 375 G G RV+AA IE SHD GIIWP+S+AP+++++ IN D+V ++ +K+Y L Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKV-KEVADKLYQDLLGD 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 502 GIDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELI 561 >gi|195016104|ref|XP_001984341.1| GH15069 [Drosophila grimshawi] gi|193897823|gb|EDV96689.1| GH15069 [Drosophila grimshawi] Length = 461 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 143/467 (30%), Positives = 239/467 (51%), Gaps = 48/467 (10%) Query: 2 RRSKYFLPILQENPRDAEIA-------SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S F P L P++A + S KL+ G++ G Y +P+ Q+A+D Sbjct: 3 KASSLFWPALV-TPKNAIVKQTEQLSRSQKLLTELGLVKPGCNGTYQIMPIAQRAVDKCI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ G ++S+P L LW ++GR + E + DR+ K + PTHEE + Sbjct: 62 NLVQRNMQEAGGQKISMPVLTPTQLWKKTGRLEGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP YQI KFRDEL+ RFG+MR++EFLMKD Y+FD+T E ++ + Sbjct: 122 TAMLATTAPISYRQLPLRLYQIGPKFRDELKSRFGLMRAKEFLMKDMYTFDVTKEAAEKT 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y ++ +Y + F +L + + + A +G +GG LSHE+ ++ GE Sbjct: 182 YARISNTYAQFFRQLEVPFVTVEAATGIMGGSLSHEYHYISPVGE--------------- 226 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE---NKRVSARGIEVGHIFYF 290 D ++ N+ YA +V ++ P ++ + RG+EV H F Sbjct: 227 ------DTLLKCNN------CGYAGNVEVFGNTSANTCPSCQGSQLIPVRGVEVAHTFLL 274 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 G KYS P+ ATF GK + MG YGIG RV+AA +E + + WP +AP+ + Sbjct: 275 GDKYSKPLGATFLNTSGKPETLVMGCYGIGITRVIAAALEVLSTEQELRWPKLLAPYDVC 334 Query: 351 LINIK--AHDQVCRDACE-KIYARLSKVGC---DVFWDDMGE-QIGSQFAVADLLGFPLQ 403 LI K + +QV + E ++ +L+++ C ++ DD E IG + A LG PL Sbjct: 335 LIGPKQGSKEQVPAEGVEIELLQQLTQI-CGAEELLHDDRKELTIGKRLFDAKRLGHPLT 393 Query: 404 VIVGSKFVSDSKVEIKHRLTGIRE-DMSLEEVINYASHRFSNNRPVL 449 ++VG+K V + +++ L+G + ++ L EV++ + + + +L Sbjct: 394 IVVGTKAVQKEEPKLELHLSGAEKLELELPEVLSLVTAHVRHKQQLL 440 >gi|254373305|ref|ZP_04988793.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida GA99-3549] gi|151571031|gb|EDN36685.1| prolyl-tRNA synthetase [Francisella novicida GA99-3549] Length = 565 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGVKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDY 229 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 72/180 (40%), Positives = 106/180 (58%), Gaps = 5/180 (2%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKV 375 G G RV+AA IE SHD GIIWP+S+AP+++++ IN D+V ++ +K+Y L Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKV-KEVADKLYQDLLGD 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 502 GIDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELI 561 >gi|254374768|ref|ZP_04990249.1| hypothetical protein FTDG_00943 [Francisella novicida GA99-3548] gi|151572487|gb|EDN38141.1| hypothetical protein FTDG_00943 [Francisella novicida GA99-3548] Length = 565 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDY 229 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 72/180 (40%), Positives = 106/180 (58%), Gaps = 5/180 (2%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKV 375 G G RV+AA IE SHD GIIWP+S+AP+++++ IN D+V ++ +K+Y L Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKV-KEVADKLYQDLLGD 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 502 GIDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELI 561 >gi|147668995|ref|YP_001213813.1| prolyl-tRNA synthetase [Dehalococcoides sp. BAV1] gi|189083496|sp|A5FS84|SYP_DEHSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146269943|gb|ABQ16935.1| prolyl-tRNA synthetase [Dehalococcoides sp. BAV1] Length = 569 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 107/226 (47%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F +E P DAE SH+L+LR+GMI Q + G+YS++PL +++ + IIR+E Sbjct: 1 MRYSRLFGKTQREIPSDAETISHQLLLRSGMIAQLTAGVYSFMPLAWRSIQKIETIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G E+++P LQ ++W +SGR +G+ + L DR D+ ++ GPTHEEV+TD+ Sbjct: 61 MNKAGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKDRNLVLGPTHEEVITDLASR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SYR+LP YQIQ KFRDE RPR G++R REF+MKD YSFD +PEG SY M + Sbjct: 121 YIQSYRDLPQRLYQIQAKFRDEPRPRGGLIRVREFIMKDMYSFDASPEGLDDSYQTMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 Y ++ R GL+S+ + A+SG IGG SHEF+++A++GE + ++C K Sbjct: 181 YESVYRRCGLESMVIDADSGAIGGKASHEFMIVAESGEDSIIYCPK 226 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 90/158 (56%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 S RG+EVGHIF GT S A F A+G H + MG YG+G R++AA IE +HD KG Sbjct: 399 SKRGVEVGHIFKLGTFLSERFGANFTDAEGVSHPIIMGCYGMGVGRLLAAAIEQNHDEKG 458 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP +AP+++ + + + V R++ EKIY L +V +DD G +F ADL Sbjct: 459 IIWPMPIAPYQVYICGLFLDNPVVRESAEKIYKELEAKSIEVLFDDRELTAGVKFNDADL 518 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LG PL++ + + + VE K R E + L+ ++ Sbjct: 519 LGIPLRLTISPRNLDKGGVEFKLRRNKESELVPLDSIV 556 >gi|300870022|ref|YP_003784893.1| prolyl-tRNA synthetase [Brachyspira pilosicoli 95/1000] gi|300687721|gb|ADK30392.1| prolyl-tRNA synthetase [Brachyspira pilosicoli 95/1000] Length = 571 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 111/219 (50%), Positives = 155/219 (70%), Gaps = 1/219 (0%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +P L+E P DA IAS+KLM+R + + S G+YS+LPLG + L+ ++ IIREE + G+ Sbjct: 1 MPTLKEAPSDAIIASNKLMIRAALARKISNGLYSYLPLGVRVLNKISNIIREEMDAIGSN 60 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E +P L S +L SGR++ + KE+ RL DRND M GPTHEE T ++ I+SY++ Sbjct: 61 ECIMPILVSKELLTPSGRWERFKKELFRLKDRNDVDMAMGPTHEEAFTITAQNEIQSYKD 120 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP T YQI KFRDE+RPRFGV+RS+EF MKDAYSF +T E +YN M +Y +IF R Sbjct: 121 LPVTLYQIHTKFRDEIRPRFGVIRSKEFTMKDAYSFHITKECLDKTYNDMSGAYTKIFKR 180 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFCSK 225 +GL ++ ++A+SG +GG+ S EF+VL++ G ET +FCSK Sbjct: 181 MGLDTVSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSK 219 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 2/175 (1%) Query: 269 DSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D PE K +G+E+GHIF G KY+ + T + K MG YGIG R +A Sbjct: 385 DRCPECGEKLYQKKGLELGHIFKLGDKYTQAFNFTVLDENNKAITPIMGCYGIGVNRALA 444 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 +VIE ++D KGII+P SVAP++ ++ I + E+IY LS +G + +DD E Sbjct: 445 SVIEQNYDDKGIIFPISVAPYEAIVVAIDKETEESFKKAEEIYKALSAIGVETMFDDRKE 504 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 ++G + DL+G P+++IVG K + VE K R ++ LE+++ Y + Sbjct: 505 RLGVKLNDCDLIGVPMRIIVGKKSLERGVVEFKLRRDLESVEVKLEDIVEYVKAK 559 >gi|118497952|ref|YP_899002.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida U112] gi|194323174|ref|ZP_03056958.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|152112922|sp|A0Q7N3|SYP_FRATN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118423858|gb|ABK90248.1| prolyl-tRNA synthetase [Francisella novicida U112] gi|194322538|gb|EDX20018.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] Length = 565 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDY 229 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 72/180 (40%), Positives = 106/180 (58%), Gaps = 5/180 (2%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKV 375 G G RV+AA IE SHD GIIWP+S+AP+++++ IN D+V ++ +K+Y L Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKV-KEVADKLYQDLLGD 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 502 GIDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITITELI 561 >gi|163781697|ref|ZP_02176697.1| prolyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159882917|gb|EDP76421.1| prolyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 570 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 112/225 (49%), Positives = 152/225 (67%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFL L+E+P +AE SH+L+L+ G I Q S GIY LP G + + + +I+R+E Sbjct: 1 MRWSRYFLYTLKEDPAEAEAPSHRLLLKAGFIKQVSAGIYEILPAGWRVIRKIESIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L A+LW E+GR+D+YG E+ RL DR+ + GPTHEE +TD+ R Sbjct: 61 MDRSGAQELLLTVLNPAELWKETGRWDTYGNELFRLKDRSGREYCLGPTHEEEITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP T YQIQ+KFRDE RPRFG++R REF+MKDAYSFD + SY M + Sbjct: 121 VVHSYRQLPVTLYQIQVKFRDEKRPRFGLIRGREFIMKDAYSFDADEFSATMSYENMKFA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCS 224 Y R+F +L L+ I +A +G IGG SHEFI D GE +V +C Sbjct: 181 YDRVFKKLRLEVIMAQASTGQIGGKQSHEFIAFTDYGEAKVGYCE 225 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 105/167 (62%), Gaps = 1/167 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+GHIF GT+YS PM A F +G + + MG YGIG R+++A++E HD KGI Sbjct: 404 RGLELGHIFLLGTRYSEPMKAYFTDPEGNEKPIIMGCYGIGISRIMSAIVEQYHDDKGIK 463 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP VAPF++ +I + D + EK+Y + G +V +DD E G +FA ADL+G Sbjct: 464 WPTPVAPFELEIICLNMSDSQMTEVAEKLYLEAEEKGIEVIYDDREESAGFKFADADLVG 523 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 FP +++VG K V + KVE++ R TG + D+ +EEVI+ + ++ Sbjct: 524 FPYRIVVGRK-VKEGKVELQKRATGEKLDVPVEEVIDRVKEMIAEDK 569 >gi|62261354|gb|AAX77983.1| unknown protein [synthetic construct] Length = 600 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 27 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 86 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 87 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 146 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 147 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 206 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 207 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDY 255 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 71/180 (39%), Positives = 106/180 (58%), Gaps = 5/180 (2%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 409 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 468 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKV 375 G G RV+AA IE SHD GIIWP+S+AP+++++ IN D++ ++ +K+Y L Sbjct: 469 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKI-KEVADKLYQDLLGD 527 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 528 GIDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELI 587 >gi|311068179|ref|YP_003973102.1| prolyl-tRNA synthetase [Bacillus atrophaeus 1942] gi|310868696|gb|ADP32171.1| prolyl-tRNA synthetase [Bacillus atrophaeus 1942] Length = 564 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 107/226 (47%), Positives = 151/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DA+ SH+L+LR G I Q++ G+YS++PL K + N+ I+REE Sbjct: 1 MRQSLTLIPTLREVPADADAKSHQLLLRAGFIRQNTSGVYSYMPLAYKVIKNIQTIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P LQ A+ W ESGR+ +YG E++RL DR+ + G THEEV+T + R Sbjct: 61 LEKINAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRHGREFALGATHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y M+ + Sbjct: 121 EVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHASEESLDETYENMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R L P+ A+SG +GG +HEF+ L++ GE + S + Sbjct: 181 YTNIFARCELNVRPVIADSGAMGGKDTHEFMALSEIGEDTIAYSDE 226 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 99/159 (62%), Gaps = 1/159 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVG +F GT+YS M+AT+ +G+ + MG YGIG R ++A+ E HD KG+ Sbjct: 403 AEGIEVGQVFKLGTRYSEAMNATYLDENGRSQPMLMGCYGIGISRTLSAIAEQHHDEKGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAP+ + ++ + + ++ EK+Y G DV +DD E+ G +FA +DL+ Sbjct: 463 IWPKSVAPYDLHILALNMKNDAQKELAEKLYETFKTEGYDVLFDDRAERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P+++ VG K + VE+K R TG ++S+EE+ ++ Sbjct: 523 GLPIRITVG-KRADEGIVEVKIRKTGESSEVSIEELSDF 560 >gi|20071917|gb|AAH27073.1| Pars2 protein [Mus musculus] Length = 397 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 138/392 (35%), Positives = 206/392 (52%), Gaps = 36/392 (9%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +I S G Y +P +A++ + +I +E G ++++P+L A+LW + R+D G Sbjct: 1 LILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMG 60 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGV 149 +E+LRL DR+ K GPTHEE +T + S K SY+ LP YQ+ KFRDE RPRFG+ Sbjct: 61 RELLRLRDRHGKEYCLGPTHEEAVTALVASQKKLSYKQLPLLLYQVTRKFRDEPRPRFGL 120 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R REF MKD Y+FD + E ++ +Y + +Y R+F RLGL+ + RA+ G IGG +SHE Sbjct: 121 LRGREFYMKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLQWMKARADVGSIGGTMSHE 180 Query: 210 FIVLADTGETQ-VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 F + D GE + V C S NT+ D+ I P T Sbjct: 181 FQLPVDIGEDRLVVCPSCHF-----SANTEILDLS--QKICPDCQGPLTET--------- 224 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 +GIEVGH FY TKYS +A F A G+ +MG YG+G R++AA Sbjct: 225 -----------KGIEVGHTFYLSTKYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAA 273 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACEKIY----ARLSKVGCDVFWD 382 IE I WP +AP+++ +I K + + + EK+Y + ++ +V D Sbjct: 274 IEVLSTEDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVEKLYDDIMEAVPQLRGEVLLD 333 Query: 383 DMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 D IG++ A+ LG+P +I G + + D Sbjct: 334 DRTHLTIGNRLKDANKLGYPFVIIAGKRALED 365 >gi|19112749|ref|NP_595957.1| mitochondrial proline-tRNA ligase (predicted) [Schizosaccharomyces pombe 972h-] gi|74676105|sp|O74765|SYPM_SCHPO RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial; AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags: Precursor gi|3687477|emb|CAA21147.1| mitochondrial proline-tRNA ligase (predicted) [Schizosaccharomyces pombe] Length = 425 Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 143/421 (33%), Positives = 216/421 (51%), Gaps = 32/421 (7%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 ++++L++ G I GI+ +LPLG + + + ++ GA +S+ L S ++W Sbjct: 26 SANQLLIDMGFIQPSMPGIFQYLPLGLRVQNKICDLLHISMRSLGASAISLAHLSSKEIW 85 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 +SGR+ G E+ RL DRND+ M PTHEE +T + I S + LP YQI KFR Sbjct: 86 EKSGRWQKTGSELFRLHDRNDREMCLAPTHEEDVTRTMATIIDSQKQLPIRVYQIGRKFR 145 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 DELRPR G++R REF+MKD Y+FD+ + +Y + +Y F +GL + ++A +G Sbjct: 146 DELRPRGGLLRGREFMMKDLYTFDIDKASAMKTYEDVLQAYHTFFKEVGLPFVMVKAATG 205 Query: 201 PIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS 260 IGG+LSHEF GE ++ + SE D +S Sbjct: 206 NIGGNLSHEFHYRHPVGEDVIYTCPS-CHYSTNSEMLDLSK----------------TSS 248 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 D+ D L S IEVGH FY G YS +AT + K + MG YGIG Sbjct: 249 DISCPNCNDQL-----TSTTAIEVGHAFYLGKIYSSKFNATVE-VKNKQEVLHMGCYGIG 302 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY-ARLSKVGCD- 378 R++AAV + D KG++WP S+AP+K+ + + D + A E +Y A + VG D Sbjct: 303 VSRLIAAVAHVTKDAKGLVWPSSIAPWKV--LVVPTSDNHIQSA-ETVYDATANVVGFDN 359 Query: 379 -VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM---SLEEV 434 + D G + A+L+G+P ++VGS+F + EI R +G R + SL +V Sbjct: 360 VLLEDRQNRAFGYKMRDAELIGYPFVIVVGSRFQEEGICEIIVRSSGERYKLDKDSLHQV 419 Query: 435 I 435 + Sbjct: 420 L 420 >gi|332184487|gb|AEE26741.1| Prolyl-tRNA synthetase Bacterial type [Francisella cf. novicida 3523] Length = 565 Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 159/230 (69%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQDIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLRDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNIMYTT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDY 229 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 105/181 (58%), Gaps = 5/181 (2%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K GIEVGHIF YS PM+A DGK + MG Sbjct: 382 VADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIDQDGKSKPMLMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSK 374 YG G RV+AA IE SHD GIIWP+++AP+++++ IN D+V ++ +K+Y L Sbjct: 442 YGFGVSRVMAAAIEQSHDQNGIIWPEAIAPYQVAILPINYNKSDKV-KEVADKLYQDLLT 500 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+ Sbjct: 501 NGIDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITVTEL 560 Query: 435 I 435 I Sbjct: 561 I 561 >gi|257884339|ref|ZP_05663992.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|261207398|ref|ZP_05922084.1| prolyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289566680|ref|ZP_06447097.1| prolyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|294613940|ref|ZP_06693875.1| prolyl-tRNA synthetase [Enterococcus faecium E1636] gi|257820177|gb|EEV47325.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|260078289|gb|EEW65994.1| prolyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289161539|gb|EFD09422.1| prolyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|291593215|gb|EFF24789.1| prolyl-tRNA synthetase [Enterococcus faecium E1636] Length = 569 Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/226 (47%), Positives = 149/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +F R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 105/183 (57%), Gaps = 11/183 (6%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+N V A RGIE+GHIF GT+YS M AT +G++ +V MG YGIG R+++ Sbjct: 391 DPSPDNNGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E D +GI WP +APF + ++ + D+ + ++ ++K G +V DD E Sbjct: 451 AIVEQHSDEQGINWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + G +FA +DL+G P+++ VG K V D VE+K + TG E++ +N Sbjct: 511 RAGVKFADSDLIGCPIRITVGKKAV-DGIVEVKIKKTG--------EMVEVRKEELANTL 561 Query: 447 PVL 449 P+L Sbjct: 562 PIL 564 >gi|325847870|ref|ZP_08170092.1| proline--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480888|gb|EGC83941.1| proline--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 572 Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 106/239 (44%), Positives = 161/239 (67%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y++P L+++P+DAE SHKL++R I + S G+YS+LPLG + ++ + I+R+ Sbjct: 1 MRLSNYYMPTLRDDPQDAETQSHKLLVRGAFIRKTSSGVYSYLPLGMRVINKIENIVRKS 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +IE+S LQS D+W +SGR+ ++G EM ++ DR+D+ GPT EE T + + Sbjct: 61 MEKYDSIEVSTSVLQSKDIWEKSGRWQNFGPEMFKIKDRHDREYCLGPTAEEQFTSLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG+ RSR+F+MKDAYSFD+ EG + SY KM+ + Sbjct: 121 ELNSYKQLPLNLYQIVSKFRDEKRPRFGINRSRDFIMKDAYSFDVDMEGLEKSYQKMWDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y+ +F LGL + +SG +GG+ SHEF+ LA+TGE ++F +++ D+ E+ F Sbjct: 181 YVEVFDALGLDYKIVEGDSGAMGGNTSHEFMALAETGEGEIFYTEN-SDYAATDESAKF 238 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 72/159 (45%), Positives = 91/159 (57%), Gaps = 5/159 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVG+IF GTKYS + A F +GK MGSYGIG R ++A+IE ++D GI Sbjct: 404 ARGIEVGNIFQLGTKYSESLEAYFLDENGKQKPFIMGSYGIGITRSISAIIEQNYDDNGI 463 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP VAPF+ I+L+N DQ + EKIY L G +V DD E+ G +F D Sbjct: 464 IWPTKVAPFEAWITLVNKNKEDQ--KQLAEKIYESLLDQGIEVMLDDRKERAGVKFNDRD 521 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G P ++ VG K SD VE R MS +E I Sbjct: 522 LVGCPYRITVG-KDASDDIVEFSKRSDMENLKMSSDEAI 559 >gi|69246859|ref|ZP_00604151.1| Prolyl-tRNA synthetase, bacterial [Enterococcus faecium DO] gi|257889274|ref|ZP_05668927.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|258615945|ref|ZP_05713715.1| prolyl-tRNA synthetase [Enterococcus faecium DO] gi|260560114|ref|ZP_05832292.1| prolyl-tRNA synthetase [Enterococcus faecium C68] gi|293560203|ref|ZP_06676705.1| prolyl-tRNA synthetase [Enterococcus faecium E1162] gi|314937502|ref|ZP_07844835.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|314942161|ref|ZP_07849015.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|314947499|ref|ZP_07850914.1| prolyl-tRNA synthetase [Enterococcus faecium TX0082] gi|314951486|ref|ZP_07854535.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|314992576|ref|ZP_07857994.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|314995489|ref|ZP_07860589.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|68195040|gb|EAN09503.1| Prolyl-tRNA synthetase, bacterial [Enterococcus faecium DO] gi|257825634|gb|EEV52260.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|260073949|gb|EEW62273.1| prolyl-tRNA synthetase [Enterococcus faecium C68] gi|291605875|gb|EFF35307.1| prolyl-tRNA synthetase [Enterococcus faecium E1162] gi|313590323|gb|EFR69168.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313592868|gb|EFR71713.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|313596326|gb|EFR75171.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|313599084|gb|EFR77929.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|313643143|gb|EFS07723.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|313646049|gb|EFS10629.1| prolyl-tRNA synthetase [Enterococcus faecium TX0082] Length = 569 Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/226 (47%), Positives = 149/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +F R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 66/170 (38%), Positives = 104/170 (61%), Gaps = 3/170 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+N V A RGIE+GHIF GT+YS M AT +G++ +V MG YGIG R+++ Sbjct: 391 DPSPDNNGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E D +GI WP +APF + ++ + D+ + ++ ++K G +V DD E Sbjct: 451 AIVEQHSDEQGINWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + G +FA +DL+G P+++ VG K V D VE+K + TG ++ EE++N Sbjct: 511 RAGVKFADSDLIGCPIRITVGKKAV-DGIVEVKIKKTGEMVEVRKEELVN 559 >gi|257887080|ref|ZP_05666733.1| prolyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257895645|ref|ZP_05675298.1| prolyl-tRNA synthetase [Enterococcus faecium Com12] gi|293377744|ref|ZP_06623933.1| proline--tRNA ligase [Enterococcus faecium PC4.1] gi|257823134|gb|EEV50066.1| prolyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257832210|gb|EEV58631.1| prolyl-tRNA synthetase [Enterococcus faecium Com12] gi|292643744|gb|EFF61865.1| proline--tRNA ligase [Enterococcus faecium PC4.1] Length = 569 Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/226 (47%), Positives = 149/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +F R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 105/183 (57%), Gaps = 11/183 (6%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+N V A RGIE+GHIF GT+YS M AT +G++ +V MG YGIG R+++ Sbjct: 391 DPSPDNNGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E D +GI WP +APF + ++ + D+ + ++ ++K G +V DD E Sbjct: 451 AIVEQHSDEQGINWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + G +FA +DL+G P+++ VG K V + VE+K + TG E++ +N Sbjct: 511 RAGVKFADSDLIGCPIRITVGKKAV-EGIVEVKIKKTG--------EMVEVRKEELANTL 561 Query: 447 PVL 449 P+L Sbjct: 562 PIL 564 >gi|257898235|ref|ZP_05677888.1| prolyl-tRNA synthetase [Enterococcus faecium Com15] gi|293570616|ref|ZP_06681667.1| prolyl-tRNA synthetase [Enterococcus faecium E980] gi|257836147|gb|EEV61221.1| prolyl-tRNA synthetase [Enterococcus faecium Com15] gi|291609287|gb|EFF38558.1| prolyl-tRNA synthetase [Enterococcus faecium E980] Length = 569 Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/226 (47%), Positives = 149/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +F R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 105/183 (57%), Gaps = 11/183 (6%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+N V A RGIE+GHIF GT+YS M AT +G++ +V MG YGIG R+++ Sbjct: 391 DPSPDNNGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E D +GI WP +APF + ++ + D+ + ++ ++K G +V DD E Sbjct: 451 AIVEQHSDEQGINWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + G +FA +DL+G P+++ VG K V D VE+K + TG E++ +N Sbjct: 511 RAGVKFADSDLIGCPIRITVGKKAV-DGIVEVKIKKTG--------EMVEVRKEELANTL 561 Query: 447 PVL 449 P+L Sbjct: 562 PIL 564 >gi|257878529|ref|ZP_05658182.1| prolyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257882947|ref|ZP_05662600.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257894712|ref|ZP_05674365.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|293567720|ref|ZP_06679062.1| prolyl-tRNA synthetase [Enterococcus faecium E1071] gi|294618726|ref|ZP_06698258.1| prolyl-tRNA synthetase [Enterococcus faecium E1679] gi|294620760|ref|ZP_06699967.1| prolyl-tRNA synthetase [Enterococcus faecium U0317] gi|257812757|gb|EEV41515.1| prolyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257818605|gb|EEV45933.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257831091|gb|EEV57698.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|291589563|gb|EFF21369.1| prolyl-tRNA synthetase [Enterococcus faecium E1071] gi|291595039|gb|EFF26384.1| prolyl-tRNA synthetase [Enterococcus faecium E1679] gi|291599740|gb|EFF30750.1| prolyl-tRNA synthetase [Enterococcus faecium U0317] Length = 569 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/226 (47%), Positives = 149/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +F R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 104/183 (56%), Gaps = 11/183 (6%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+N V A RGIE+GHIF GT+YS M AT +G++ +V MG YGIG R+++ Sbjct: 391 DPSPDNNGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E D +GI WP +APF + ++ + D+ ++ ++K G +V DD E Sbjct: 451 AIVEQHSDEQGINWPKGIAPFDLHIVQMNLKDEYQTSLTNELEEAMTKAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + G +FA +DL+G P+++ VG K V D VE+K + TG E++ +N Sbjct: 511 RAGVKFADSDLIGCPIRITVGKKAV-DGIVEVKIKKTG--------EMVEVRKEELANTL 561 Query: 447 PVL 449 P+L Sbjct: 562 PIL 564 >gi|227551759|ref|ZP_03981808.1| proline--tRNA ligase [Enterococcus faecium TX1330] gi|227179064|gb|EEI60036.1| proline--tRNA ligase [Enterococcus faecium TX1330] Length = 569 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/226 (47%), Positives = 149/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +F R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 105/183 (57%), Gaps = 11/183 (6%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+N V A RGIE+GHIF GT+YS M AT +G++ +V MG YGIG R+++ Sbjct: 391 DPSPDNNGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E D +GI WP +APF + ++ + D+ + ++ ++K G +V DD E Sbjct: 451 AIVEQHSDEQGINWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + G +FA +DL+G P+++ VG K V + VE+K + TG E++ +N Sbjct: 511 RAGVKFADSDLIGCPIRITVGKKAV-EGIVEVKIKKTG--------EMVEVRKEELANTL 561 Query: 447 PVL 449 P+L Sbjct: 562 PIL 564 >gi|293556646|ref|ZP_06675211.1| prolyl-tRNA synthetase [Enterococcus faecium E1039] gi|291601181|gb|EFF31468.1| prolyl-tRNA synthetase [Enterococcus faecium E1039] Length = 569 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/226 (47%), Positives = 149/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKILIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +F R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 104/183 (56%), Gaps = 11/183 (6%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+N V A RGIE+GHIF GT+YS M AT +G++ +V MG YGIG R+++ Sbjct: 391 DPSPDNNGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E D +GI WP +APF + ++ + D+ ++ ++K G +V DD E Sbjct: 451 AIVEQHSDEQGINWPKGIAPFDLHIVQMNLKDEYQTSLTNELEEAMTKAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + G +FA +DL+G P+++ VG K V D VE+K + TG E++ +N Sbjct: 511 RAGVKFADSDLIGCPIRITVGKKAV-DGIVEVKIKKTG--------EMVEVRKEELANTL 561 Query: 447 PVL 449 P+L Sbjct: 562 PIL 564 >gi|73748213|ref|YP_307452.1| prolyl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|114152188|sp|Q3ZZD0|SYP_DEHSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|73659929|emb|CAI82536.1| prolyl-tRNA synthetase [Dehalococcoides sp. CBDB1] Length = 569 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 107/226 (47%), Positives = 157/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F +E P DAE SH+L+LR+GMI Q + G+YS++PL +++ + IIR+E Sbjct: 1 MRYSRLFGKTQREIPSDAETISHQLLLRSGMIAQLTAGVYSFMPLAWRSIQKIENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G E+++P LQ ++W +SGR +G+ + L DR D+ ++ GPTHEEV+TD+ Sbjct: 61 MNKAGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKDRNLVLGPTHEEVITDLASR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SYR+LP YQIQ KFRDE RPR G++R REF+MKD YSFD +PEG SY M + Sbjct: 121 YIQSYRDLPQRLYQIQAKFRDEPRPRGGLIRVREFIMKDMYSFDASPEGLDDSYQTMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y ++ R GL+S+ + A+SG IGG SHEF+++A++GE ++C K Sbjct: 181 YESVYRRCGLESMVIDADSGAIGGKASHEFMIVAESGEDSIIYCPK 226 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 92/159 (57%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 S RG+EVGHIF GT S A F A+G H + MG YG+G R++AA IE +HD K Sbjct: 398 ASKRGVEVGHIFKLGTFLSERFGANFTDAEGVSHPIIMGCYGMGVGRLLAAAIEQNHDEK 457 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 GIIWP +AP+++ + + + V R++ EKIYA L G +V +DD G +F AD Sbjct: 458 GIIWPMPIAPYQVYICGLFLDNPVVRESAEKIYAELEAKGIEVLFDDRELTAGVKFNDAD 517 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG PL++ + + + VE K R E + L+ ++ Sbjct: 518 LLGIPLRLTISPRNLDKGGVEFKLRRNKESELVPLDSIV 556 >gi|239618079|ref|YP_002941401.1| prolyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|259511603|sp|C5CFP9|SYP_KOSOT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|239506910|gb|ACR80397.1| prolyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 581 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+E P DA++ S KL++R G + +++ G+Y++LPLG + L V I+REE Sbjct: 1 MRFSQLYAPTLKEAPSDADLVSIKLLIRGGFVRKNAAGVYTYLPLGLRVLKKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ +P +Q A+LW ESGR+D YG EM++ DR+++ GPTHEE++T I R+ Sbjct: 61 MAAIGCQEILMPIIQPAELWFESGRWDDYGPEMMKFKDRHERDFTLGPTHEELLTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR P + +QI K+RDE+RPRFG++R+REFLMKDAYSF E +Y + + Sbjct: 121 ELRSYRQFPLSLFQIANKYRDEIRPRFGLIRAREFLMKDAYSFHTDWESLDKAYKDFYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y RI R+GLK + + A++G IGGD SHEF LADTGE T ++C Sbjct: 181 YGRIMERIGLKYLVVEADTGAIGGDESHEFNALADTGESTLLYC 224 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/155 (38%), Positives = 87/155 (56%), Gaps = 2/155 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIE+GHIF GTKYS M+ F +G++H MG YG G R ++AV+E HD G+ Sbjct: 404 TKGIELGHIFKLGTKYSEKMNGYFTDENGENHPYIMGCYGWGISRTMSAVVEQMHDEHGM 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP S+APF I + + + E++Y L K +V DD G +F ADL+ Sbjct: 464 IWPLSIAPFHIIITMVNPSQEQISKVGEELY-ELLKEKYEVLLDDRQASPGVKFKDADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G PL++ VG K ++ +E+K R ++S+ E Sbjct: 523 GIPLRITVGKK-LTKGLIELKLRTEKQLVEVSISE 556 >gi|152990768|ref|YP_001356490.1| prolyl-tRNA synthetase [Nitratiruptor sp. SB155-2] gi|166980135|sp|A6Q3S4|SYP_NITSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|151422629|dbj|BAF70133.1| prolyl-tRNA synthetase [Nitratiruptor sp. SB155-2] Length = 569 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 152/226 (67%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+P ++ENP+DA + SH ++R G I Q + GIY++LP+G+K LD + AI++EE Sbjct: 1 MRFSKTFIPTMKENPKDAVLPSHIYLVRGGFITQVASGIYNFLPIGKKVLDKIRAIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+S+ + +LW ESGR YGKE+LR DR + + GPTHEE+M D+ R+ Sbjct: 61 LDKAGCQEVSLGFVTPCELWEESGRLGKYGKELLRFKDRKENCFVLGPTHEEMMVDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG++R REFLMKD YSF E + Y+ M + Sbjct: 121 RVTSYKQLPLNLYQINWKFRDEARPRFGLLRGREFLMKDGYSFHADEEDMRREYDLMEKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 Y IF RLGL+ + A+ G IGG+ S EF+VLA++GE T C++ Sbjct: 181 YRNIFGRLGLRFRAVEADVGAIGGNASKEFMVLAESGEDTIAICTE 226 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/158 (43%), Positives = 97/158 (61%), Gaps = 5/158 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVGHIF GT+YS M+ATF DGK MG+YGIG R+VAA IE +HD +G Sbjct: 404 TKGIEVGHIFQLGTRYSAAMNATFLDKDGKAKPFVMGTYGIGVSRLVAASIEQNHDERGC 463 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +APF++ +I NIK +Q+ E++Y +L G DV DD E+ G + + Sbjct: 464 IWPLQIAPFEVDIIVSNIKDEEQIAFG--EELYEQLKNAGVDVILDDRPERFGPKIKDFE 521 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L+GFP +IVG K + + V+I R T + ++ E+V Sbjct: 522 LIGFPYGIIVG-KGLKEGTVQIVQRETLDKVEIPKEDV 558 >gi|299143351|ref|ZP_07036431.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517836|gb|EFI41575.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 584 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 108/218 (49%), Positives = 149/218 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK ++P L+E P DAEIASH+L+LR I + + GIY++LPLG K + V I+REE Sbjct: 1 MKLSKLYMPTLREVPADAEIASHQLLLRGAFIRKSASGIYTYLPLGYKVIKKVEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + +Q ++W S R+D +G EM +L DRND+ GPT EE T + + Sbjct: 61 MDRAGSQEILMSAIQPKEIWEASDRWDRFGPEMFKLRDRNDREFCLGPTAEEYFTTLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPRFG+ R+REF MKDAYSFD TPE + SY +M+ + Sbjct: 121 EVKSYKQLPLNLYQIQTKYRDEKRPRFGINRAREFSMKDAYSFDTTPETMQVSYMEMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF RLGL + ++G +GG SHEFI L++TGE Sbjct: 181 YEKIFDRLGLDYKIVEGDNGAMGGKKSHEFIALSETGE 218 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 65/167 (38%), Positives = 100/167 (59%), Gaps = 1/167 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVG+IF GTKYS ++AT+ +GK+ + MGSYG+G R V A++E ++D GI Sbjct: 403 ARGIEVGNIFQLGTKYSEALNATYLDENGKEQLIWMGSYGVGVTRTVTAIVEQNYDENGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAP+ + + + D++ + EKIY L ++G +V DD E+ G +F DL+ Sbjct: 463 IWPMSVAPYHVIVTVVNPKDEIQLELGEKIYNSLVELGHEVLLDDRNERAGVKFKDRDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G P+++ VG K ++ VE R + ++ +E I S N+ Sbjct: 523 GIPIRITVG-KRAAEEIVEYSLRRETEKTEIFAKEAIEKVSGEIFNS 568 >gi|257784517|ref|YP_003179734.1| prolyl-tRNA synthetase [Atopobium parvulum DSM 20469] gi|257473024|gb|ACV51143.1| prolyl-tRNA synthetase [Atopobium parvulum DSM 20469] Length = 565 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 109/221 (49%), Positives = 153/221 (69%), Gaps = 1/221 (0%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S + P L+E+P +A +ASH+L+LR GMI + + G+YS+LPL ++L + AIIR+E + Sbjct: 2 SSLYAPTLKEDPAEAVLASHRLLLRAGMIRKTAAGLYSYLPLAWRSLLKIEAIIRDEMDG 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ VP + A+LW ESGR+D YG E++R+ DR+D+ GPTHEE TD+ R+ +K Sbjct: 62 IGAQEILVPIMTPAELWEESGRWDVYGDELMRMHDRHDRQFALGPTHEETFTDLIRNELK 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY+ LP T YQIQ KFRDE RPRFG+MR REF+MKD YSF E + Y++ V+Y Sbjct: 122 SYKQLPVTLYQIQDKFRDERRPRFGLMRGREFIMKDGYSFSANQESLQECYDQEKVAYQN 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 + R L+++ + A+SG IGGD S EF+ LA+ GE V+C Sbjct: 182 VCDRTRLRALQVVADSGQIGGDTSVEFMALAEAGEASLVYC 222 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 73/169 (43%), Positives = 106/169 (62%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIEVG +F GTKYS ++ATF +G+D + MG YGIG R++AAV+E +D KG Sbjct: 395 AARGIEVGQVFQLGTKYSSALNATFTDENGQDKPLVMGCYGIGVSRLLAAVVEQYNDEKG 454 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I WP SVAP+++S++ + D DA + G + DD E+ G +FA ADL Sbjct: 455 IKWPVSVAPYEVSVLCLSNKDPEIWDAAGAVADACVAAGLETVVDDRVERPGVKFADADL 514 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +GFP QVIVG K V++ E+K R TG R +++L+EV ++ + + R Sbjct: 515 IGFPWQVIVGKKGVTNGIAEVKERATGERFEVALDEVASWLAEKILPER 563 >gi|152992232|ref|YP_001357953.1| prolyl-tRNA synthetase [Sulfurovum sp. NBC37-1] gi|166980164|sp|A6Q7Y7|SYP_SULNB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|151424093|dbj|BAF71596.1| prolyl-tRNA synthetase [Sulfurovum sp. NBC37-1] Length = 568 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 112/225 (49%), Positives = 151/225 (67%), Gaps = 2/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIRE 59 MR S+ +P +E P DA +ASH ++R G I G+Y++LPLG+K LD V +++E Sbjct: 1 MRFSRLLIPTTKETPNDATLASHIYLIRGGFIQSVGGSGLYNFLPLGKKVLDRVRNVVKE 60 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E ++ G E+S+ + A LW ESGRY+ YGKE+LR DR + + GPTHEE+M ++ R Sbjct: 61 ELDKAGCQEVSLSFVTPASLWEESGRYEKYGKELLRFKDRKNNEFVLGPTHEEMMVNLVR 120 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSY+ LP YQI LKFRDE+RPRFG+MR REFLMKD YSF + E K ++ M Sbjct: 121 QSVKSYKQLPLNLYQINLKFRDEIRPRFGLMRGREFLMKDGYSFHTSEEDMKREFDLMEE 180 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 +Y +IF RLGL+ + A+SG IGG S EF+VLAD+GE T V C Sbjct: 181 TYKKIFTRLGLEFRVVEADSGAIGGSGSKEFMVLADSGEDTIVVC 225 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 5/165 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIE GHIF GT+YS P+ ATF +GK + MG+YGIG R++AA+IE +HD +G Sbjct: 406 TKGIEAGHIFQLGTQYSEPLGATFLDENGKAQPMVMGTYGIGVSRLLAAIIEQNHDDRGC 465 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW APF + LI NIK QV EK+Y L+ G DV +DD ++ G++ + Sbjct: 466 IWTKESAPFDLQLIVSNIKDETQVALG--EKLYEALTAKGLDVLFDDRKDRFGAKMKDYE 523 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 LLG P V++G K + D VE R ++E++S E +++ R Sbjct: 524 LLGIPYAVVIGKK-LQDGLVEFISREGLVKEEVSAEAILDVVGER 567 >gi|330936741|gb|EGH40917.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B] Length = 548 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 106/201 (52%), Positives = 147/201 (73%) Query: 24 KLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVES 83 +LMLR GMI + + G+Y+WLP+G + L V AI+REE + GA+E+ +P +Q A+LW ES Sbjct: 1 QLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQES 60 Query: 84 GRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDEL 143 GR++ YG E++RL DR+++ GPTHEEV+TD+ R+ + SY+ LP YQIQ KFRDE+ Sbjct: 61 GRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLPINLYQIQTKFRDEI 120 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 RPRFG+MR REF+MKDAYSF E + +Y++M ++Y IF RLGLK P+ A++G IG Sbjct: 121 RPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLAYSNIFTRLGLKFRPVEADNGSIG 180 Query: 204 GDLSHEFIVLADTGETQVFCS 224 G SHEF VLA++GE + S Sbjct: 181 GAGSHEFHVLAESGEDDIVFS 201 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 4/187 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M G +GK + Sbjct: 355 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 414 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE + D GIIW D++APF+I+L+ ++ R+A +K+YA L Sbjct: 415 AMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALVPLRYETDAVREATDKLYADL 474 Query: 373 SKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD ++ G +FA +L+G P +++V + +++ +E K R + ++ Sbjct: 475 TAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIA 534 Query: 431 LEEVINY 437 + +V+++ Sbjct: 535 VADVLSF 541 >gi|281419389|ref|ZP_06250404.1| prolyl-tRNA synthetase [Clostridium thermocellum JW20] gi|281407009|gb|EFB37272.1| prolyl-tRNA synthetase [Clostridium thermocellum JW20] Length = 572 Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 113/224 (50%), Positives = 152/224 (67%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F L+E P +AEIASH+LMLR G++ + + GIYS+LPLG + + I+REE Sbjct: 1 MRVSNMFFQTLREVPAEAEIASHQLMLRAGLMRKLASGIYSFLPLGYRVFRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ + L A+ + SGR++ +G EM RL DRN + GPTHEE+ T+ +S Sbjct: 61 MDRAGAQELIMSALLPAESYQASGRWEVFGAEMFRLKDRNGRDFCLGPTHEEIFTETVKS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR+LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD G SY KM+ + Sbjct: 121 VTRSYRSLPLILYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDRDEAGLDISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF RLGL I + A++G +GG S EF+V + GE+++ +C Sbjct: 181 YCRIFDRLGLDYIIVDADTGAMGGSGSQEFMVKSAVGESRIAYC 224 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 62/141 (43%), Positives = 87/141 (61%), Gaps = 1/141 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVGHIF GTKYS + + GK+ + MG YGIG R +AAVIE ++D GIIW Sbjct: 406 GIEVGHIFKLGTKYSEALDCIYLDETGKERPMIMGCYGIGINRSMAAVIEQNNDENGIIW 465 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P S+AP+ + +I + D V + EKIY +L ++G +V DD E+ G +F ADL+G Sbjct: 466 PISIAPYHVIVIPVNTTDSVQMELAEKIYTQLGEMGIEVLLDDRDERPGVKFKDADLIGI 525 Query: 401 PLQVIVGSKFVSDSKVEIKHR 421 P+++ VG + + VE K R Sbjct: 526 PIRITVGKR-AGEGIVEYKLR 545 >gi|242309901|ref|ZP_04809056.1| prolyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] gi|239523198|gb|EEQ63064.1| prolyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] Length = 578 Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 107/226 (47%), Positives = 155/226 (68%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +F+P L+E P+D + SH+ +LR G I Q GIY++LPLG++ LD ++ I+++E Sbjct: 1 MRFSNFFIPTLKETPKDVVLKSHEYLLRGGFIQQIGSGIYNFLPLGKRVLDKISKIVKQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ + + A LW SGRY+ YGKE+LR DR + ++GPTHEE +T++ ++ Sbjct: 61 MDNAGANEVLLGCVTPASLWQASGRYERYGKELLRFKDRKENEFVFGPTHEETITELVKT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + E K +++M + Sbjct: 121 YVKSYKQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHSSYEDLKREFDEMERT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF +LGL + A+SG IGG S EF+VLA++GE + C D Sbjct: 181 YSVIFSKLGLDFRAVEADSGAIGGSGSKEFMVLAESGEDTI-CVCD 225 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 86/145 (59%), Gaps = 5/145 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVGHIF G KYS M ATF +GK MG YGIG R++AA+IE +D KG+ Sbjct: 411 TKGIEVGHIFQLGEKYSQAMGATFLDENGKSKPFIMGCYGIGISRLLAAIIEQHYDEKGM 470 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 W + APF + ++ N+K +QV + +IY LS+ + DD E+ G++ A + Sbjct: 471 KWTKATAPFLLDIVISNVKDCEQV--ELATRIYHALSEQKIECLLDDRNERYGAKMADFE 528 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L+G P +IVG K + + KVE+ R Sbjct: 529 LIGMPYALIVG-KGIQEGKVELVCR 552 >gi|291566398|dbj|BAI88670.1| prolyl-tRNA synthetase [Arthrospira platensis NIES-39] Length = 601 Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 114/229 (49%), Positives = 150/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + G+Y++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPTEAEIPSHKLLLRAGYIRRIGSGVYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P +Q ++LW ESGR+D+Y K M L DR D+++ GPTHEEV+T + Sbjct: 61 MNATGAQECLLPQVQPSELWKESGRWDTYTKAEGIMFSLKDRRDRSLALGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + E K +Y M Sbjct: 121 ARDMIRSYQQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTSEESLKQTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y I R GL + A+SG IGG S EF+VLAD GE +V + D Sbjct: 181 DRAYRNILRRCGLDFCAVEADSGAIGGSGSQEFMVLADAGEDEVLYTPD 229 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 103/176 (58%), Gaps = 5/176 (2%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIEVGHIF GTKYS M AT+ G+D + MG YG+G R+ A +E Sbjct: 428 PSQTLESARGIEVGHIFQLGTKYSQAMGATYTSETGEDLPLVMGCYGVGVSRLAQAAVEQ 487 Query: 332 SHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 S+D GIIWP ++AP+ I++ N+ + Q+ +++Y++L++ G + DD E+ G Sbjct: 488 SYDKDGIIWPVAIAPYHAIITVPNVSDNQQMA--IAQQLYSQLNQAGVETLLDDRNERAG 545 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 +F ADL+G P +++ G + + KVE+ R ++ +E+V++ + S + Sbjct: 546 VKFKDADLVGIPYRIVTG-RAIKSGKVELVQRADHESSEVPIEQVVSLLQQKISQS 600 >gi|325479231|gb|EGC82327.1| proline--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13] Length = 572 Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 109/239 (45%), Positives = 159/239 (66%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY++P L+E+P DAE ASHK + R I + + G+YS+LPLG+K ++ + AI+RE Sbjct: 1 MRLSKYYMPTLREDPVDAETASHKYLTRGAFIRKQASGVYSFLPLGKKVINKIEAIVRES 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+S LQ+ ++W SGR++++G EM +L DR+++ GPT EE TD+ ++ Sbjct: 61 MENHDSIEVSTSILQAKEIWETSGRWETFGPEMFKLEDRHNRQYCLGPTAEEAFTDLIKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG+ RSR+FLMKDAYSFD + EG + SY KM+ + Sbjct: 121 ELNSYKQLPLNIYQIVDKFRDEKRPRFGINRSRDFLMKDAYSFDASYEGLELSYQKMWDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y+ F ++GL+ + +SG +GG SHEFI L++TGE + + D D+ E F Sbjct: 181 YVEAFDKMGLEYKIVEGDSGSMGGRKSHEFIALSETGEGVILYT-DSSDYAATDEKARF 238 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/174 (42%), Positives = 101/174 (58%), Gaps = 9/174 (5%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIEVG+IF GTKYS + A F +GK MGSYGIG R V+A++E HD KG Sbjct: 402 AARGIEVGNIFQLGTKYSESLEAYFLDENGKQQPFIMGSYGIGISRSVSAIVEQYHDDKG 461 Query: 338 IIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 I+WP SVAPF+ +++IN DQ ++ E+IY +L + DV DD E+ G +F Sbjct: 462 ILWPTSVAPFEAIVTIINPNKEDQ--KELGEEIYNKLKEERIDVLLDDRKERAGVKFNDR 519 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRL----TGIREDMSLEEVINYASHRFSNN 445 DL+G P ++ VG K SD VE R I D ++E++I+ S N Sbjct: 520 DLIGIPYRITVG-KDASDEIVEYSTRREMENEKITVDTAIEKIISSVKKDLSFN 572 >gi|256005276|ref|ZP_05430242.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|255990712|gb|EEU00828.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|316939553|gb|ADU73587.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 1313] Length = 572 Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 113/224 (50%), Positives = 152/224 (67%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F L+E P +AEIASH+LMLR G++ + + GIYS+LPLG + + I+REE Sbjct: 1 MRVSNMFFQTLREVPAEAEIASHQLMLRAGLMRKLASGIYSFLPLGYRVFRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ + L A+ + SGR++ +G EM RL DRN + GPTHEE+ T+ +S Sbjct: 61 MDRAGAQELIMSALLPAESYQASGRWEVFGAEMFRLKDRNGRDFCLGPTHEEIFTETVKS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR+LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD G SY KM+ + Sbjct: 121 VTRSYRSLPLILYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDRDEAGLDISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF RLGL I + A++G +GG S EF+V + GE+++ +C Sbjct: 181 YCRIFDRLGLDYIIVDADTGAMGGSGSQEFMVKSAVGESRIAYC 224 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 1/165 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVGHIF GTKYS + + GK+ + MG YGIG R +AAVIE ++D GIIW Sbjct: 406 GIEVGHIFKLGTKYSEALDCIYLDETGKERPMIMGCYGIGINRSMAAVIEQNNDENGIIW 465 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P S+AP+ + +I + D V + EKIY +L ++G +V DD E+ G +F ADL+G Sbjct: 466 PISIAPYHVIVIPVNTTDSVQMELAEKIYTQLGEMGIEVLLDDRDERPGVKFKDADLIGI 525 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 P+++ VG + + VE K R + EE I A + Sbjct: 526 PIRITVGKR-AGEGIVEYKLRREKDFAAIPYEEAIAKAKEEVAEG 569 >gi|257065041|ref|YP_003144713.1| prolyl-tRNA synthetase, family II [Slackia heliotrinireducens DSM 20476] gi|256792694|gb|ACV23364.1| prolyl-tRNA synthetase, family II [Slackia heliotrinireducens DSM 20476] Length = 570 Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 108/224 (48%), Positives = 160/224 (71%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S ++P L+E+P DA+I S KL+ R GMI + + G+YS+LPLG + L + I+REE Sbjct: 10 LRMSTMYVPTLKEDPSDADIPSAKLLTRAGMIRKEAAGLYSFLPLGLRVLRKIENIVREE 69 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +QSADLW +SGR+ +YG+EM+ + DR+D GPT EEV+TD+ ++ Sbjct: 70 MDSHGGEELLMPFVQSADLWRQSGRWGAYGEEMMTMRDRHDNEFCLGPTAEEVITDLVKN 129 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY++LP Y IQLKFRDE RPRFG++RSREF+MKDAYSFD EG + +Y M + Sbjct: 130 ELRSYKDLPKNLYHIQLKFRDERRPRFGLLRSREFIMKDAYSFDKDQEGLEVNYQLMRDA 189 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 Y R+ R+G++ ++A+ G IGG+ + EF+ LA+TGE + V+C Sbjct: 190 YSRMCERMGMEYRIVQADPGEIGGNGTEEFMTLAETGEAELVYC 233 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 66/160 (41%), Positives = 101/160 (63%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIEVG IF GTKYS M A F DG + MG YG+G R +AA +E SHD G Sbjct: 406 AARGIEVGQIFKLGTKYSEAMGALFMDEDGTEKPFIMGCYGVGVSRCMAAAVEQSHDDMG 465 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP +AP +++I + +A E + A+L+ G +V DD E+ G +FA DL Sbjct: 466 IIWPVGIAPAHVAVIPLSTKPDEVTEAAEDVAAKLAAAGLEVCIDDRDERAGVKFADNDL 525 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +G+P QV++G + ++ VE+K+R TG + D+++++V+++ Sbjct: 526 IGWPAQVVIGKRGLAAGTVEVKNRKTGEKTDVAVDDVVSF 565 >gi|256396855|ref|YP_003118419.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] gi|256363081|gb|ACU76578.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] Length = 582 Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 111/223 (49%), Positives = 150/223 (67%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G + + + GIYSWLPLG++ L+NV ++REE Sbjct: 4 RMSSLFLRTLREDPADAEVPSHKLLVRGGYVRRVAPGIYSWLPLGKQVLENVTRVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G E+ P L + + +GR+ YG + RL DR + GPTHEE+ TD+ +S Sbjct: 64 DRMGGQEVQFPALLPREYYEATGRWTEYGDNLFRLQDRRGNDYLLGPTHEEMFTDMVKSE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SY++LP T YQIQ K+RDE RPR G++R REFLMKD+YSFDL +G KHSY + +Y Sbjct: 124 VSSYKDLPVTLYQIQTKYRDEARPRAGILRGREFLMKDSYSFDLDDDGLKHSYAEHRDTY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 +RIF RLG+K + A SG +GG S EF+ A TGE T V C Sbjct: 184 IRIFDRLGIKYKIVSAVSGAMGGSASEEFLATAPTGEDTYVAC 226 Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 4/160 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ G DGK V MGSYG+G R VA + E HD G++ Sbjct: 418 RGIEIGHIFQLGRKYADAAKLDVLGKDGKPVRVTMGSYGVGVSRAVAVLAEQLHDELGLV 477 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI--GSQFAVADL 397 WP VAP + ++ D + + L G V +DD + G +F A+L Sbjct: 478 WPREVAPADVHIVA-AGKDPAIYETANRYAEELGARGVRVLYDDRVGSVSPGVKFKDAEL 536 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +G P V+VG + ++D VE++ R TG + ++++ +++ + Sbjct: 537 IGVPTIVVVG-RNLADGVVEVRDRQTGEKAEVAVPDLVEH 575 >gi|125975428|ref|YP_001039338.1| prolyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|152016597|sp|A3DJL6|SYP_CLOTH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|125715653|gb|ABN54145.1| prolyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] Length = 572 Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 113/224 (50%), Positives = 152/224 (67%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F L+E P +AEIASH+LMLR G++ + + GIYS+LPLG + + I+REE Sbjct: 1 MRVSNMFFQTLREVPAEAEIASHQLMLRAGLMRKLASGIYSFLPLGYRVFRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ + L A+ + SGR++ +G EM RL DRN + GPTHEE+ T+ +S Sbjct: 61 MDRAGAQELIMSALLPAESYQASGRWEVFGAEMFRLKDRNGRDFCLGPTHEEIFTETVKS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR+LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD G SY KM+ + Sbjct: 121 VTRSYRSLPLILYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDRDEAGLDISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF RLGL I + A++G +GG S EF+V + GE+++ +C Sbjct: 181 YCRIFDRLGLDYIIVDADTGAMGGSDSQEFMVKSAVGESRIAYC 224 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 62/141 (43%), Positives = 87/141 (61%), Gaps = 1/141 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVGHIF GTKYS + + GK+ + MG YGIG R +AAVIE ++D GIIW Sbjct: 406 GIEVGHIFKLGTKYSEALDCIYLDETGKERPMIMGCYGIGINRSMAAVIEQNNDENGIIW 465 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P S+AP+ + +I + D V + EKIY +L ++G +V DD E+ G +F ADL+G Sbjct: 466 PISIAPYHVIVIPVNTTDSVQMELAEKIYTQLGEMGIEVLLDDRDERPGVKFKDADLIGI 525 Query: 401 PLQVIVGSKFVSDSKVEIKHR 421 P+++ VG + + VE K R Sbjct: 526 PIRITVGKR-AGEGIVEYKLR 545 >gi|227824508|ref|ZP_03989340.1| prolyl-tRNA synthetase [Acidaminococcus sp. D21] gi|226905007|gb|EEH90925.1| prolyl-tRNA synthetase [Acidaminococcus sp. D21] Length = 571 Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 114/245 (46%), Positives = 161/245 (65%), Gaps = 3/245 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+E P +A + SHKLMLR G I + + G+Y++LPL K++ + IIREE Sbjct: 1 MLVSKLYAPTLREVPAEAVLESHKLMLRAGYIRKIAGGLYTYLPLAWKSIKKIERIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ +P +Q +++W ESGR+D YG EM R+ DR+ + GPTHEE++T + ++ Sbjct: 61 MDAIDSQEIMMPIVQPSEIWKESGRWDVYGAEMFRVRDRHGREFCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP + YQIQ KFRDE RPRFG+MRSREF+MKDAY+FD G SY KM+ + Sbjct: 121 ELHSYRQLPTSLYQIQSKFRDEKRPRFGLMRSREFIMKDAYTFDADEAGLDESYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDF 239 Y RIF R GL P+ A+ G IGG+ SHEF+ +A +GE V+C D D+ E + Sbjct: 181 YARIFDRCGLNYRPVEADPGAIGGNGSHEFMGIAASGEAGIVYC--DTCDYAADVEKAEC 238 Query: 240 DDIIS 244 + + S Sbjct: 239 EALPS 243 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 83/237 (35%), Positives = 118/237 (49%), Gaps = 17/237 (7%) Query: 200 GPIGGDLSHEFIVLADT--GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 GPIG DL+ I++ T V C + +D T + D V Y Sbjct: 333 GPIGLDLNKCTILIDATVMNMHNVCCGANEVD-------THYVDAEPCRDFV------YT 379 Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ D P K ARGIEVG +F TKYS + ATF +GK+ MG Sbjct: 380 KVLDIRTAHEGDQCPHCKGHLKEARGIEVGQVFKLYTKYSEALHATFLDPEGKEKPFYMG 439 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R +AAVIE HD G I P ++AP+++ ++ + D+ +IY L+ Sbjct: 440 SYGIGVGRTLAAVIEQYHDANGAIMPKNIAPYEVIVLPVNVKDEESFAKAGEIYQALNAQ 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G D DD E+ G +F ADL+G+P++V+VG K + +E+K R TG D+ L+ Sbjct: 500 GIDAILDDRDERAGVKFKDADLIGYPVRVVVGPKTLQRGAMEVKVRYTGEMCDLPLD 556 >gi|56752145|ref|YP_172846.1| prolyl-tRNA synthetase [Synechococcus elongatus PCC 6301] gi|81820564|sp|Q5N044|SYP_SYNP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56687104|dbj|BAD80326.1| proline-tRNA ligase [Synechococcus elongatus PCC 6301] Length = 600 Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 114/229 (49%), Positives = 152/229 (66%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIASGIYAYLPLMWRVLRKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA E +P LQ A+LW ESGR+++Y K M L DR + + GPTHEEV+T + Sbjct: 61 MDATGAQETLLPQLQPAELWQESGRWETYAKAEGIMFSLDDRQQRQLGLGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y M Sbjct: 121 ARDLIRSYRQLPQNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEESLRQTYAAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y IF R GL+ + A+SG IGG S EF++LAD GE ++ ++D Sbjct: 181 DQAYRNIFRRCGLQFRAVEADSGAIGGSASQEFMILADAGEDEILYTED 229 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 5/146 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE GHIF G KYS M ATF +G + + MG YGIG RV A +E S+D G Sbjct: 432 SARGIEAGHIFQLGLKYSQAMGATFTTENGTEEPLWMGCYGIGVSRVAQAAVEQSYDKDG 491 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP++ ++ NI +QV A EKIYA L+ G + DD E+ G +F A Sbjct: 492 IIWPVAIAPYQAVVVIPNITDTEQVA--AAEKIYADLTAAGIETLLDDRDERAGVKFKDA 549 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHR 421 DL+G P +++ G + + + KVE+ R Sbjct: 550 DLIGIPYRIVTG-RSLKEGKVEVVQR 574 >gi|260424720|ref|ZP_05778980.1| proline--tRNA ligase [Dialister invisus DSM 15470] gi|260402944|gb|EEW96491.1| proline--tRNA ligase [Dialister invisus DSM 15470] Length = 576 Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 119/266 (44%), Positives = 165/266 (62%), Gaps = 17/266 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+E P DA + SH+ ML+ GM+ + S G+Y++LPL +++ V I+REE Sbjct: 3 MLASKLYSPTLREIPSDAVVVSHQYMLKAGMMRKVSNGLYAFLPLALRSVRKVEDIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G+ E+ +P Q A++W +S R+D YG+EM +L DR+ GPTHEE++T + + Sbjct: 63 MNAIGSQEILMPITQPAEIWKQSERWDVYGEEMFKLNDRHGHEYCLGPTHEELVTVLAKM 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY+ LP + YQIQ K+RDE RPRFG+MRSREF+MKDAY+FD+ EG Y+ M+ + Sbjct: 123 DTSSYKQLPVSLYQIQNKYRDEKRPRFGLMRSREFIMKDAYTFDMDEEGLDRQYHLMYDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL P+ A+SG IGG SHEF V+AD+GE + KD DF E + Sbjct: 183 YTRIFTRCGLHFRPVVADSGAIGGSGSHEFEVIADSGEADIVYCKD-CDFAANIEAVE-- 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEK 266 P A +S VHN+K Sbjct: 240 --------------PKALSSSVHNDK 251 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 59/155 (38%), Positives = 94/155 (60%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVG +F GTKYS + T+ DGK H + MG YGIG R VAA IE +HD GII Sbjct: 406 KGIEVGQVFKLGTKYSEKLGCTYLDRDGKTHPMVMGCYGIGITRTVAASIEQNHDKDGII 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++AP+++ ++ D+ +A +Y ++ +V DD E+ G +F ADL+G Sbjct: 466 WPVAIAPYEVVIVPANNKDEGVMNAARHLYDKMEDCRDEVILDDRDERAGIKFKDADLIG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +P++V +G K+ VE++ R +G+ +++L + Sbjct: 526 YPIRVTIGKKWKESGLVEVRLRRSGVVSEVALADC 560 >gi|307297853|ref|ZP_07577659.1| prolyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306917113|gb|EFN47495.1| prolyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 580 Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+E P DA++ S KL++R G + + + GIYS+LPLG + L + I+R+E Sbjct: 1 MRFSQLYAPTLKEAPADADLISIKLLVRGGFVRKVAAGIYSFLPLGFRVLKKIEDIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G+ E+ +P +Q A+LW E+GR+D YG EM+R+ DR+++ GPTHEE++T + R+ Sbjct: 61 MNAIGSQEILMPIIQPAELWHETGRWDDYGPEMMRMQDRHERFFTLGPTHEEIITHLLRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP + YQI +K+RDE+RPRFG+MRSREFLMKDAYSF + +Y + + + Sbjct: 121 ELNSYKQLPVSLYQIAMKYRDEIRPRFGLMRSREFLMKDAYSFHGSWSSLDETYKQFYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y +I R+GL+ + + A+SG IGG+ SHEF VLAD GE T ++C Sbjct: 181 YSKILQRIGLEFLVVEADSGAIGGNESHEFNVLADYGESTLLYC 224 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 64/175 (36%), Positives = 95/175 (54%), Gaps = 5/175 (2%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SA+GIEVGHIF GTKYS M+ G + MG YG G R ++A++E HD G Sbjct: 401 SAKGIEVGHIFKLGTKYSEKMNGYVTDEKGNSIHYIMGCYGWGVSRTISAIVEQLHDENG 460 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP +VAPF I + + D + + ++Y LS+ G +V DD G +F ADL Sbjct: 461 IIWPLAVAPFDIIVTAVNIKDPIVSEKSIQLYDILSEAGFEVLLDDREISPGMKFKDADL 520 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL----EEVINYASHRFSNNRPV 448 +G P+++ +G K ++ VE+K R ++S+ + ++ SN RPV Sbjct: 521 IGIPVRITLGKK-LAQGIVEVKPRTEKKPLEVSIVDGFDTLLEEIKKELSNYRPV 574 >gi|289432262|ref|YP_003462135.1| prolyl-tRNA synthetase [Dehalococcoides sp. GT] gi|288945982|gb|ADC73679.1| prolyl-tRNA synthetase [Dehalococcoides sp. GT] Length = 569 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 107/226 (47%), Positives = 156/226 (69%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F +E P DAE SH+L+LR+GMI Q + G+YS++PL +++ + IIR+E Sbjct: 1 MRYSRLFGKTQREIPSDAETISHQLLLRSGMIAQLTAGVYSFMPLAWRSIQKIENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G E+++P LQ ++W +SGR +G+ + L DR D ++ GPTHEEV+TD+ Sbjct: 61 MNKAGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKDHNLVLGPTHEEVITDLASR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SYR+LP YQIQ KFRDE RPR G++R REF+MKD YSFD +PEG SY M + Sbjct: 121 YIQSYRDLPQRLYQIQAKFRDEPRPRGGLIRVREFIMKDMYSFDASPEGLDDSYQTMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y ++ R GL+S+ + A+SG IGG SHEF+++A++GE ++C K Sbjct: 181 YESVYRRCGLESMVIDADSGAIGGKASHEFMIVAESGEDSIIYCPK 226 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 90/158 (56%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 S RG+EVGHIF GT S A F A+G H + MG YG+G R++AA IE +HD KG Sbjct: 399 SKRGVEVGHIFKLGTFLSERFGANFTDAEGVSHPIIMGCYGMGVGRLLAAAIEQNHDEKG 458 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP +AP+++ + + + V R++ EKIY L +V +DD G +F ADL Sbjct: 459 IIWPMPIAPYQVYICGLFLDNPVVRESAEKIYKELEAKSIEVLFDDRELTAGVKFNDADL 518 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LG PL++ + + + VE K R E + L+ ++ Sbjct: 519 LGIPLRLTISPRNLDKGGVEFKLRRNKESELVPLDSIV 556 >gi|282896497|ref|ZP_06304517.1| Prolyl-tRNA synthetase [Raphidiopsis brookii D9] gi|281198603|gb|EFA73484.1| Prolyl-tRNA synthetase [Raphidiopsis brookii D9] Length = 604 Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 117/229 (51%), Positives = 150/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL+LR G I + G+Y++LPL + L ++ IIREE Sbjct: 2 MRLSQKLFVTLRDDPADAEIPSHKLLLRAGYIRRIGSGVYAYLPLMWRVLQKISQIIREE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 62 MNATGAEECLLPQLQPAELWKESGRWDTYTKAEGIMFSLIDRREQHLGLGPTHEEVITTI 121 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF E K +Y M Sbjct: 122 GRDMIRSYRQLPVHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTDEESLKKTYQDM 181 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + +Y I R GL + A+SG IGG S EF+VLAD GE +V ++D Sbjct: 182 YKAYSNILRRCGLAFRAVEADSGAIGGSGSTEFMVLADAGEDEVLYTQD 230 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 105/167 (62%), Gaps = 5/167 (2%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P +ARGIE GHIF GTKYSL M AT+ G++ + MG YG+G R+ + +E Sbjct: 428 PSQTLETARGIEAGHIFQLGTKYSLAMGATYTNEQGEEKPLVMGCYGVGVSRLAQSAVEQ 487 Query: 332 SHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 S+DG GIIWP ++AP+ IS+ NIK QV + EKIY L+KVG + DD E+ G Sbjct: 488 SYDGDGIIWPVAIAPYHAIISIPNIKDSQQV--EIAEKIYTELNKVGIETLLDDRNERAG 545 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +F ADL+G P +++ G + ++ KVE+ R T +++++E+++N Sbjct: 546 VKFKDADLIGIPYRIVTG-RSITHGKVEVVTRATRESKEIAIEDLVN 591 >gi|213405351|ref|XP_002173447.1| prolyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] gi|212001494|gb|EEB07154.1| prolyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] Length = 418 Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 135/423 (31%), Positives = 216/423 (51%), Gaps = 38/423 (8%) Query: 25 LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESG 84 L++ G + Q S G++ LPLG + +DN++ I+ +E GAI +S+ +L + +W +S Sbjct: 30 LLIDQGYVQQSSSGVFQLLPLGLRVMDNISNIVHQELAGLGAIRVSLASLSAKAVWQQSK 89 Query: 85 RYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 R++ G EML + DR + PTHEE MT + + S + LP + YQI K+RDE R Sbjct: 90 RWEKMGSEMLHIRDRAQRDYCLCPTHEEEMTRMVANVFHSSKQLPISVYQIGSKYRDEAR 149 Query: 145 PRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGG 204 PR G++R++EFLM D Y++D T E ++ +Y ++F S+ RIF +GL A+ G +GG Sbjct: 150 PRGGLLRAKEFLMMDLYTYDATKEAAEKTYERVFQSFHRIFRAIGLPYTVAEAQQGTMGG 209 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 SHEF L + GE V + +AA +D ++ Sbjct: 210 AYSHEFHYLNEVGEDVVLRCPQCL---------------------------HAANTDAYH 242 Query: 265 EKLFDSL-PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + + + + + IEVGH F G Y+ P D + M SYGIG R Sbjct: 243 GSIDKCVHCGGELLQQKCIEVGHTFNLGQTYTRPFQLCLSNGDA----LYMNSYGIGISR 298 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV--GCDVFW 381 ++AAV +HD KG++WP ++AP+KI I + A D DA E +Y L++ ++ Sbjct: 299 LLAAVAHMTHDEKGLVWPTAIAPWKI--IILPASDSKIPDA-EALYDSLAQTFGANNILL 355 Query: 382 DDMGEQ-IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 DD G + G + A+L+GFP + VG + D ++ R + R + ++ S Sbjct: 356 DDRGHKSYGRKIRDAELIGFPFIITVGESYTRDGSFDVLARASNTRYKLKAAQLHTVVSG 415 Query: 441 RFS 443 F+ Sbjct: 416 NFA 418 >gi|282899245|ref|ZP_06307218.1| Prolyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505] gi|281195881|gb|EFA70805.1| Prolyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505] Length = 603 Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 116/229 (50%), Positives = 150/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL+LR G I + G+Y++LPL + L ++ I+REE Sbjct: 1 MRLSQKLFVTLRDDPADAEIPSHKLLLRAGYIRRIGSGVYAYLPLMWRVLQKISQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNATGAEECLLPQLQPAELWKESGRWDTYTKAEGIMFSLIDRREQHLGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF E K +Y M Sbjct: 121 GRDMIRSYRQLPVHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTDEESLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + +Y I R GL + A+SG IGG S EF+VLAD GE +V ++D Sbjct: 181 YQAYSNILRRCGLAFRAVEADSGAIGGSGSTEFMVLADAGEDEVLYTQD 229 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 5/167 (2%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P +ARGIE GHIF GTKYSL M AT+ G++ + MG YG+G R+ + +E Sbjct: 427 PSQTLETARGIEAGHIFQLGTKYSLAMGATYTNEQGEEKPLVMGCYGVGVSRLAQSAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 S+DG GIIWP ++AP+ IS+ NIK QV + EKIY L+KVG + DD E+ G Sbjct: 487 SYDGDGIIWPVAIAPYHAIISIPNIKDTHQV--EIAEKIYTELNKVGIETLLDDRNERAG 544 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +F ADL+G P +++ G + +S KVE+ R T +++++E +++ Sbjct: 545 VKFKDADLIGIPYRIVTG-RSISHGKVEVVTRATRESQEIAIENLVD 590 >gi|161344091|ref|YP_400976.2| prolyl-tRNA synthetase [Synechococcus elongatus PCC 7942] gi|114152269|sp|Q31LT0|SYP_SYNE7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 600 Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 114/229 (49%), Positives = 152/229 (66%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIASGIYAYLPLMWRVLRKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA E +P LQ A+LW ESGR+++Y K M L DR + + GPTHEEV+T + Sbjct: 61 MDATGAQETLLPQLQPAELWQESGRWETYTKAEGIMFSLDDRQQRQLGLGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y M Sbjct: 121 ARDLIRSYRQLPQNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEESLRQTYAAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y IF R GL+ + A+SG IGG S EF++LAD GE ++ ++D Sbjct: 181 DQAYRNIFRRCGLQFRAVEADSGAIGGSASQEFMILADAGEDEILYTED 229 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 5/146 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE GHIF G KYS M ATF +G + + MG YGIG RV A +E S+D G Sbjct: 432 SARGIEAGHIFQLGLKYSQAMGATFTTENGTEEPLWMGCYGIGVSRVAQAAVEQSYDKDG 491 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP++ ++ NI +QV A EKIYA L+ G + DD E+ G +F A Sbjct: 492 IIWPVAIAPYQAVVVIPNITDTEQVA--AAEKIYADLTAAGIETLLDDRDERAGVKFKDA 549 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHR 421 DL+G P +++ G + + + KVE+ R Sbjct: 550 DLIGIPYRIVTG-RSLKEGKVEVVQR 574 >gi|186680962|ref|YP_001864158.1| prolyl-tRNA synthetase [Nostoc punctiforme PCC 73102] gi|226701314|sp|B2J707|SYP_NOSP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|186463414|gb|ACC79215.1| prolyl-tRNA synthetase [Nostoc punctiforme PCC 73102] Length = 604 Score = 232 bits (592), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 119/251 (47%), Positives = 156/251 (62%), Gaps = 12/251 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL+LR G I + G+Y++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLRDDPADAEIPSHKLLLRAGYIRRIGSGLYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ ADLW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNATGAQECLLPQLQPADLWKESGRWDTYTKAEGIMFSLIDRREQQLGLGPTHEEVITAI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF K +Y M Sbjct: 121 ARDMIRSYRQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTDEASLKETYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD---------FM 228 + +Y I R GL + A+SG IGG S EF++LA+ GE +V ++D + Sbjct: 181 YKAYSNILRRSGLAFRAVEADSGAIGGSGSTEFMILAEAGEDEVLYTEDGKYAANVEKAV 240 Query: 229 DFPIPSENTDF 239 PI +E + F Sbjct: 241 SLPIDAETSRF 251 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/165 (38%), Positives = 101/165 (61%), Gaps = 5/165 (3%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 PE SARGIE GHIF GTKYS M AT+ G++ + MG +G+G R+ A +E Sbjct: 427 PEQTLQSARGIEAGHIFQLGTKYSQAMGATYTNEQGEEKPLLMGCFGVGVSRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 S+D GIIWP ++AP+ +++ NIK QV + +K+Y L++ G + DD E+ G Sbjct: 487 SYDNDGIIWPVAIAPYHAIVTIPNIKDAQQV--EVAQKLYTELNQAGIETLLDDRDERAG 544 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +F ADL+G P +++ G + +++ KVE+ R T +++ ++EV Sbjct: 545 VKFKDADLIGIPYRIVTG-RAIANGKVEVVERATRKSQEIVIDEV 588 >gi|89895282|ref|YP_518769.1| hypothetical protein DSY2536 [Desulfitobacterium hafniense Y51] gi|114152191|sp|Q24UG7|SYP_DESHY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|89334730|dbj|BAE84325.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 575 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 110/227 (48%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ P L+E P +AE+ SH+L++R G+I + + GIY++LPLG + L + I+REE Sbjct: 1 MRVSQILNPTLREVPAEAEVVSHQLLVRAGLIRKSAAGIYTYLPLGLRVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A+LW ESGR+D YG+E++RL DR+++ GPTHEE++TD+ R Sbjct: 61 MDAKGGQEVLLPIIQPAELWRESGRWDLYGQELMRLNDRHNREFCLGPTHEEIITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP YQIQ K+RDE RPRFG+MR REF+MKD YSFD G SY KM+ + Sbjct: 121 EIRSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDEAGLAESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAE-SGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL P+ A+ G +HEF+VLA++GE V D Sbjct: 181 YTRIFTRCGLSFRPVEADAGAIGGTGGTHEFMVLAESGEAAVVYCPD 227 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 99/157 (63%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 ARGIEVG +F GTKYS ++A F +G +H MG YGIG R +AA IE ++D G Sbjct: 404 EARGIEVGQVFKLGTKYSKALNAVFLDENGAEHPCVMGCYGIGVSRTMAAAIEQNNDKDG 463 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP +AP+ + ++ + D R+ E +Y L K+G + DD E+ G +F ADL Sbjct: 464 IIWPIPIAPYHVIVVPVNMKDDQVRETGEALYQELLKLGVEAVLDDRDERPGVKFKDADL 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G+PL+V VGSK +++ +VE++ R TG + + +EE+ Sbjct: 524 VGYPLRVTVGSKTLANGEVELRDRKTGEVQLVKVEEL 560 >gi|81169649|gb|ABB57989.1| prolyl-tRNA synthetase [Synechococcus elongatus PCC 7942] Length = 606 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 114/229 (49%), Positives = 152/229 (66%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + + GIY++LPL + L V+ I+REE Sbjct: 7 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIASGIYAYLPLMWRVLRKVSQIVREE 66 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA E +P LQ A+LW ESGR+++Y K M L DR + + GPTHEEV+T + Sbjct: 67 MDATGAQETLLPQLQPAELWQESGRWETYTKAEGIMFSLDDRQQRQLGLGPTHEEVITAV 126 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y M Sbjct: 127 ARDLIRSYRQLPQNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEESLRQTYAAM 186 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y IF R GL+ + A+SG IGG S EF++LAD GE ++ ++D Sbjct: 187 DQAYRNIFRRCGLQFRAVEADSGAIGGSASQEFMILADAGEDEILYTED 235 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 5/146 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE GHIF G KYS M ATF +G + + MG YGIG RV A +E S+D G Sbjct: 438 SARGIEAGHIFQLGLKYSQAMGATFTTENGTEEPLWMGCYGIGVSRVAQAAVEQSYDKDG 497 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP++ ++ NI +QV A EKIYA L+ G + DD E+ G +F A Sbjct: 498 IIWPVAIAPYQAVVVIPNITDTEQVA--AAEKIYADLTAAGIETLLDDRDERAGVKFKDA 555 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHR 421 DL+G P +++ G + + + KVE+ R Sbjct: 556 DLIGIPYRIVTG-RSLKEGKVEVVQR 580 >gi|325290366|ref|YP_004266547.1| Prolyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324965767|gb|ADY56546.1| Prolyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 571 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 113/225 (50%), Positives = 149/225 (66%), Gaps = 2/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ P L+E P +AEI SH+LMLR G I + + G+Y++LPL + L + IIREE Sbjct: 1 MRVSQLLNPTLREVPAEAEIVSHQLMLRAGFIRKVAGGVYTYLPLALRVLRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E+ +P +Q ++LW E+ R+D YG EM RL DR+D+ GPTHEEV+TD+ R Sbjct: 61 MNAKGGQELLLPIVQPSELWKETKRWDIYGPEMFRLKDRHDREFCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE RPRFG+MR REF+MKD YSFD E SY KM+ + Sbjct: 121 EVRSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDAEAGAESYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAE-SGPIGGDLSHEFIVLADTGETQ-VFC 223 Y +IF R GL P+ A+ G +HEF+VLAD+GE VFC Sbjct: 181 YTKIFSRCGLTFRPVEADAGAIGGTGGTHEFMVLADSGEAAVVFC 225 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 99/159 (62%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 ARGIEVG +F GTKYS + AT+ G++ MG YGIG R +AA IE +HD G Sbjct: 404 EARGIEVGQVFNLGTKYSEALKATYLDEKGQEKLCYMGCYGIGVSRTMAAAIEQNHDTNG 463 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 +IWP +APF+ ++ + + + EK+YA++ + G +V DD E+ G +F ADL Sbjct: 464 VIWPIPIAPFECIIVPVSLKSEAVVETSEKLYAQMLEAGIEVIIDDRDERPGVKFKDADL 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +G+PL++ +G K +++ KVE+ R TG E + +E+V+ Sbjct: 524 IGYPLRINIGEKSLAEGKVELFRRKTGQMELLDIEQVMT 562 >gi|284051766|ref|ZP_06381976.1| prolyl-tRNA synthetase [Arthrospira platensis str. Paraca] Length = 601 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 113/229 (49%), Positives = 150/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + G+Y++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPTEAEIPSHKLLLRAGYIRRIGSGVYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P +Q ++LW ESGR+D+Y K M L DR D+++ GPTHEEV+T + Sbjct: 61 MNATGAQECLLPQVQPSELWKESGRWDTYTKAEGIMFSLKDRRDRSLALGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + + K +Y M Sbjct: 121 ARDMIRSYQQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTSEDSLKQTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y I R GL + A+SG IGG S EF+VLAD GE +V + D Sbjct: 181 DRAYRNILRRCGLDFCAVEADSGAIGGSGSQEFMVLADAGEDEVLYTPD 229 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 98/174 (56%), Gaps = 1/174 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIEVGHIF GTKYS M AT+ G+D + MG YG+G R+ A +E Sbjct: 428 PSQTLESARGIEVGHIFQLGTKYSQAMGATYTSETGEDLPLVMGCYGVGVSRLAQAAVEQ 487 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S++ GIIWP ++AP+ + + D +++Y++L++ G + DD E+ G + Sbjct: 488 SYNKDGIIWPVAIAPYHVIITVPNVSDNQQMAIAQQLYSQLNQAGVETLLDDRNERAGVK 547 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 F ADL+G P +++ G + + KVE+ R ++ +E+V++ + S + Sbjct: 548 FKDADLVGIPYRIVTG-RAIKSGKVELVQRADHESSEVPIEQVVSLLQQKISQS 600 >gi|209525764|ref|ZP_03274300.1| prolyl-tRNA synthetase [Arthrospira maxima CS-328] gi|209493737|gb|EDZ94056.1| prolyl-tRNA synthetase [Arthrospira maxima CS-328] Length = 601 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 113/229 (49%), Positives = 150/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + G+Y++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPTEAEIPSHKLLLRAGYIRRIGSGVYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P +Q ++LW ESGR+D+Y K M L DR D+++ GPTHEEV+T + Sbjct: 61 MNATGAQECLLPQVQPSELWKESGRWDTYTKAEGIMFSLKDRRDRSLALGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + + K +Y M Sbjct: 121 ARDMIRSYQQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTSEDSLKQTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y I R GL + A+SG IGG S EF+VLAD GE +V + D Sbjct: 181 DRAYRNILRRCGLDFCAVEADSGAIGGSGSQEFMVLADAGEDEVLYTPD 229 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 98/174 (56%), Gaps = 1/174 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIE+GHIF GTKYS M AT+ G+D + MG YG+G R+ A +E Sbjct: 428 PSQTLESARGIEIGHIFQLGTKYSQAMGATYTSETGEDLPLVMGCYGVGVSRLAQAAVEQ 487 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP+ + + D +++Y++L++ G + DD E+ G + Sbjct: 488 SYDKDGIIWPVAIAPYHVIITVPNVSDNQQMAIAQQLYSQLNQAGVETLLDDRNERAGVK 547 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 F ADL+G P +++ G + + KVE+ R ++ +E+V++ + S + Sbjct: 548 FKDADLVGIPYRIVTG-RAIKSGKVELVQRADHESSEVPIEQVVSLLQQKISQS 600 >gi|219669716|ref|YP_002460151.1| prolyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] gi|254782897|sp|B8FR28|SYP_DESHD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219539976|gb|ACL21715.1| prolyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] Length = 575 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 110/227 (48%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ P L+E P +AE+ SH+L++R G+I + + GIY++LPLG + L + I+REE Sbjct: 1 MRVSQILNPTLREVPAEAEVVSHQLLVRAGLIRKSAAGIYTYLPLGLRVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A+LW ESGR+D YG+E++RL DR+++ GPTHEE++TD+ R Sbjct: 61 MDAKGGQEVLLPIIQPAELWRESGRWDLYGQELMRLNDRHNREFCLGPTHEEIITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP YQIQ K+RDE RPRFG+MR REF+MKD YSFD G SY KM+ + Sbjct: 121 EIRSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDEAGLAESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAE-SGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL P+ A+ G +HEF+VLA++GE V D Sbjct: 181 YTRIFTRCGLTFRPVEADAGAIGGTGGTHEFMVLAESGEAAVVYCPD 227 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 99/157 (63%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 ARGIEVG +F GTKYS ++A F +G +H MG YGIG R +AA IE ++D G Sbjct: 404 EARGIEVGQVFKLGTKYSKALNAVFLDENGAEHPCVMGCYGIGVSRTMAAAIEQNNDKDG 463 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP +AP+ + ++ + D R+ E +Y L K+G + DD E+ G +F ADL Sbjct: 464 IIWPIPIAPYHVIVVPVNMKDDQVRETGEALYQELLKLGVEAVLDDRDERPGVKFKDADL 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G+PL+V VGSK +++ +VE++ R TG + + +EE+ Sbjct: 524 VGYPLRVTVGSKTLANGEVELRDRKTGEVQLVKVEEL 560 >gi|150019972|ref|YP_001305326.1| prolyl-tRNA synthetase [Thermosipho melanesiensis BI429] gi|166980168|sp|A6LJ40|SYP_THEM4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|149792493|gb|ABR29941.1| prolyl-tRNA synthetase [Thermosipho melanesiensis BI429] Length = 564 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+ENP DAEI S L+ R G I + + G+Y++LPL ++ L + I+REE Sbjct: 1 MRFSQLYAPTLRENPADAEIPSQALLQRAGFIRKIAAGVYTYLPLARRTLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q A+LW++SGR+D YG EM++L DR+++ GPTHEE++T++ ++ Sbjct: 61 MDRIGAQEILMPIIQPAELWIKSGRWDDYGPEMMKLKDRHNRDFTLGPTHEELVTELVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T YQI K+RDE+RPRFGV+R+REF+MKDAYSF + E Y K + Sbjct: 121 ELNSYKQLPVTLYQIANKYRDEIRPRFGVLRAREFIMKDAYSFHDSWESLDEVYKKFKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RI R+GL+ + A SG IGG SHEF+ A+ GE+ + +C Sbjct: 181 YSRILERIGLRYTVIEASSGAIGGKESHEFVAFAEYGESNILYC 224 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 90/158 (56%), Gaps = 3/158 (1%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 S RGIE+GHIF GTKYS M + DGK MG YG G R + A++E HD G Sbjct: 400 SERGIELGHIFKLGTKYSETMDVKYMNKDGKMKPFIMGCYGWGISRTLGAIVEQLHDDNG 459 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP SVAP+++ + + ++ + EK+Y L G DV DD G +F ADL Sbjct: 460 IIWPVSVAPYEVVITVVGKENE--KSFAEKLYRYLLDKGVDVLIDDRDVSPGVKFKDADL 517 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +GFPL++ +G + D KVE+K R+ + + EEVI Sbjct: 518 IGFPLRITIGKSY-KDGKVELKERVGNVTIIEADEEVI 554 >gi|195440008|ref|XP_002067851.1| GK12501 [Drosophila willistoni] gi|194163936|gb|EDW78837.1| GK12501 [Drosophila willistoni] Length = 461 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 153/466 (32%), Positives = 241/466 (51%), Gaps = 47/466 (10%) Query: 2 RRSKYFLPILQENPRDAEIA-------SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 R SK F P+L + P+DA I S KL+ G+I S G Y +P+ Q++LD Sbjct: 3 RASKIFWPMLVK-PKDAVIKQTEQLSRSQKLLTELGLIKSGSNGTYQIMPIAQRSLDKCI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 ++++ G ++++P L S LW +SGR + E + DR+ K + PTHEE + Sbjct: 62 NLVQQNMVEAGGQKITLPVLTSTALWKKSGRLEGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP YQI KFRDEL+ RFG+MR++EFLMKD Y+FDL+ E +K + Sbjct: 122 TAMLATAAPISYRQLPLRLYQIGPKFRDELKSRFGMMRAKEFLMKDMYTFDLSQETAKDT 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y+ + +Y R F +L + + + AE+G +GG LSHE+ ++ GE D + Sbjct: 182 YDIITKAYDRFFQQLEVPFVKVNAETGIMGGSLSHEYHYISSVGE----------DTLVK 231 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 E+ F + N+ V + +S+ N + D+L + G+EV H F G K Sbjct: 232 CESCGF----AGNAEV------FHQSSNCPNCQKADNLSQ-----VHGVEVAHTFLLGDK 276 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 YS P+ ATF GK + MG YGIG RV+AA +E + + WP +AP+ + +I Sbjct: 277 YSKPLGATFLNTSGKPQSLIMGCYGIGLSRVLAASLEVLSTDQELRWPKLLAPYDVCVIG 336 Query: 354 IK--AHDQVCRDACEKIYARLSKVG--C---DVFWDDMGE-QIGSQFAVADLLGFPLQVI 405 K + +Q + E Y L +G C +V DD + IG + LG P ++ Sbjct: 337 PKQGSKEQTLAERVE--YNLLEHLGDICGSDEVLHDDRKDLTIGKRLLDGKRLGHPFIIV 394 Query: 406 VGSKFV--SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 G+K V D ++E+ H G + +++L E + + S + ++ Sbjct: 395 AGAKSVLPEDPRLEL-HSSDGNKMELNLNEALQMVNQYVSQKKHLI 439 >gi|224419073|ref|ZP_03657079.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|313142583|ref|ZP_07804776.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|313131614|gb|EFR49231.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 573 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 152/226 (67%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK+F+P +E P+D + SH+ +LR G I Q GIY++LPLG+K LD ++ I++ + Sbjct: 1 MRFSKFFIPTFKEVPKDVILKSHEYLLRGGFIQQIGSGIYNFLPLGKKVLDKISRIVKNK 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ + + A LW SGRYD YGKE+LR DR + ++GPTHEE +T++ ++ Sbjct: 61 MDEAGANEVLLGCVTPASLWQASGRYDRYGKELLRFKDRKENEFVFGPTHEETITELAKT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ LP FYQIQ KFRDE+RPRFG+MR REF+MKD YSF E K ++ M + Sbjct: 121 YIKSYKQLPLHFYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHSNYEDLKREFDVMEKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF LGL + A+SG IGG S EF+VLA++GE + C D Sbjct: 181 YSAIFLELGLDFRAVEADSGAIGGSGSKEFMVLAESGEDTI-CVCD 225 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/145 (44%), Positives = 87/145 (60%), Gaps = 5/145 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVGHIF G KYS M ATF +GK MG YGIG R++AA+IE +HD KG+ Sbjct: 411 TKGIEVGHIFQLGEKYSQAMEATFLDEEGKAKPFVMGCYGIGISRLLAAIIEQNHDEKGM 470 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 W + APF + ++ NIK +Q + EKIY LS G + DD E+ G++ A + Sbjct: 471 KWTATTAPFLLDIVVSNIKDENQ--SELAEKIYHALSANGIECLLDDRKERYGAKMADFE 528 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L+G P +IVG K V + K+E+ R Sbjct: 529 LIGIPYALIVG-KGVEEGKIELVCR 552 >gi|28212194|ref|NP_783138.1| prolyl-tRNA synthetase [Clostridium tetani E88] gi|81841121|sp|Q890M2|SYP_CLOTE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|28204638|gb|AAO37075.1| prolyl-tRNA synthetase [Clostridium tetani E88] Length = 570 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 117/254 (46%), Positives = 159/254 (62%), Gaps = 6/254 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR GM+ + + G+Y+++P G + + + I+REE Sbjct: 1 MKLSNMLVSTLREVPAEAEIPSHKLMLRAGMMRKMASGVYNFMPFGLRVIKKIEDIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E L ++LW ESGR+D +G EM RL DRN++ GPTHEEV TDI R+ Sbjct: 61 MDNAGAQEFLASALLPSELWKESGRWDVFGPEMFRLQDRNNREFCLGPTHEEVFTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG+MRSREF+MKDAYSFD E SY KM+ + Sbjct: 121 EINSYKQLPLNLYQIQTKYRDERRPRFGLMRSREFIMKDAYSFDKDYEDLDVSYKKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC-----SKDFMDFPIPS 234 Y IF R GL+ + A+SG +GG S EF+V ++ GE ++ FC + P S Sbjct: 181 YHNIFIRCGLECNCVEADSGAMGGAGSAEFMVKSEVGEDEIAFCDSCGYGANIEKAPAIS 240 Query: 235 ENTDFDDIISLNSI 248 E D +++ L I Sbjct: 241 EKFDQEELKELAKI 254 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/165 (42%), Positives = 98/165 (59%), Gaps = 1/165 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGHIF GTKYS M A F G+ + MG YGIG R +AA IE +HD GI Sbjct: 401 ARGIEVGHIFKLGTKYSESMGANFLDEKGESRPLVMGCYGIGVSRTMAAAIEQNHDENGI 460 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP S+AP+ + ++ + D+ A E+IY +L +G +V DD E+ G +F ADL+ Sbjct: 461 VWPLSIAPYHVIVVPVITKDEEQMKAAEEIYNKLKSMGVEVLLDDRAERPGVKFKDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P++V VG K + + KVE K R E +++E+V + F Sbjct: 521 GIPIRVTVGKK-IKEGKVEYKLRKEEDLEILNIEQVYDKVREEFE 564 >gi|17232545|ref|NP_489093.1| prolyl-tRNA synthetase [Nostoc sp. PCC 7120] gi|81852728|sp|Q8YM83|SYP_ANASP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|17134191|dbj|BAB76752.1| prolyl-tRNA synthetase [Nostoc sp. PCC 7120] Length = 604 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 114/229 (49%), Positives = 151/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLRDDPSDAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ ++LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNATGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFSLIDRREQQLGLGPTHEEVITAI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKD YSF + + K +Y M Sbjct: 121 ARDMIRSYRQLPLHLYQLQTKFRDEIRPRFGLMRGREFIMKDGYSFHVDEDSLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + +Y + R GL P+ A+SG IGG S EF+VLA+ GE +V + D Sbjct: 181 YQAYSNMLRRAGLAFRPVEADSGAIGGSGSTEFMVLAEAGEDEVLYTDD 229 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 100/161 (62%), Gaps = 5/161 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIEVGHIF GTKYS + AT+ G++ + MG YG+G R+ + +E S+D G Sbjct: 433 SARGIEVGHIFQLGTKYSQALGATYTNEQGEEKPLVMGCYGVGVSRLAQSAVEQSYDKDG 492 Query: 338 IIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP+ +++ NI QV + EK+Y L++ G + DD E+ G +F A Sbjct: 493 IIWPVAIAPYHAIVTIPNINDAQQV--EIAEKLYTELNQSGVETLLDDRNERAGVKFKDA 550 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DL+G P +++ G + +++ KVEI R T +++ ++EVI Sbjct: 551 DLIGIPYRIVTG-RAITNGKVEIVERATRQSQEIPIDEVIT 590 >gi|253828011|ref|ZP_04870896.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253511417|gb|EES90076.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 578 Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 152/226 (67%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK+F+P +E P+D + SH+ +LR G I Q GIY++LPLG+K LD ++ I++ + Sbjct: 1 MRFSKFFIPTFKEVPKDVILKSHEYLLRGGFIQQIGSGIYNFLPLGKKVLDKISRIVKNK 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ + + A LW SGRYD YGKE+LR DR + ++GPTHEE +T++ ++ Sbjct: 61 MDEAGANEVLLGCVTPASLWQASGRYDRYGKELLRFKDRKENEFVFGPTHEETITELAKT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ LP FYQIQ KFRDE+RPRFG+MR REF+MKD YSF E K ++ M + Sbjct: 121 YIKSYKQLPLHFYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHSNYEDLKREFDVMEKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF LGL + A+SG IGG S EF+VLA++GE + C D Sbjct: 181 YSAIFLELGLDFRAVEADSGAIGGSGSKEFMVLAESGEDTI-CVCD 225 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/145 (44%), Positives = 87/145 (60%), Gaps = 5/145 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVGHIF G KYS M ATF +GK MG YGIG R++AA+IE +HD KG+ Sbjct: 411 TKGIEVGHIFQLGEKYSQAMEATFLDEEGKAKPFVMGCYGIGISRLLAAIIEQNHDEKGM 470 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 W + APF + ++ NIK +Q + EKIY LS G + DD E+ G++ A + Sbjct: 471 KWTATTAPFLLDIVVSNIKDENQ--SELAEKIYHALSANGIECLLDDRKERYGAKMADFE 528 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L+G P +IVG K V + K+E+ R Sbjct: 529 LIGIPYALIVG-KGVEEGKIELVCR 552 >gi|157127485|ref|XP_001655003.1| prolyl-tRNA synthetase [Aedes aegypti] gi|108872928|gb|EAT37153.1| prolyl-tRNA synthetase [Aedes aegypti] Length = 435 Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 145/436 (33%), Positives = 223/436 (51%), Gaps = 54/436 (12%) Query: 4 SKYFLP--ILQENP----RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDN-VNAI 56 SK F P I+ +N +D S +LML G++ Q G + LPL Q+++ ++ + Sbjct: 5 SKIFQPSLIIPKNAIVKNQDITSKSQRLMLEQGLMRQAGNGTFYILPLLQRSVQKAIDLV 64 Query: 57 IREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTD 116 Q+ GA ++++P L SADLW +SGR ++ G E++ DR+ K I GPTHEE +T Sbjct: 65 DHHMQHFAGAEKLTLPILTSADLWRKSGRLETAGGELMSTTDRHGKRQILGPTHEESITA 124 Query: 117 IFRS-HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 + + SYR P YQI KFRDE++PRFG+MR++EFLMKD Y+FD+ ++ +Y Sbjct: 125 LLAAISPVSYRQFPLRLYQISTKFRDEMKPRFGLMRAKEFLMKDLYTFDVGLAEARQTYE 184 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + +Y R+F +G+ + +R ++G +GG SHE+ ++ GE Q+ C Sbjct: 185 VVNEAYRRLFEAVGVPFVKVRGDTGVMGGSTSHEYHFPSEVGEDQLVCC----------- 233 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS------ARGIEVGHIFY 289 + + N+++FD +R + GIEVGH F Sbjct: 234 -----SVCGMGC----------------NQEMFDGEKACERCNNSNIGRQAGIEVGHAFI 272 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 KYS + A F +GK +QMG YGIG R++AA +E K I WP ++APFK+ Sbjct: 273 LEDKYSKALGAMFLNQNGKPEALQMGCYGIGITRLIAAGVEVLSSEKEIRWPRALAPFKV 332 Query: 350 SLINIKAHD------QVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPL 402 LI K + E ++LS VG +V DD IG + A G+P+ Sbjct: 333 CLIPPKKGSKEESLVEPWLHRLEDEVSKLSSVGSEVVVDDRTSLTIGKRLLDAKKTGYPV 392 Query: 403 QVIVGSKFVSDSKVEI 418 V++G K +D E+ Sbjct: 393 VVVIGPK-AADEGAEL 407 >gi|257066241|ref|YP_003152497.1| prolyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] gi|256798121|gb|ACV28776.1| prolyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] Length = 572 Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 109/239 (45%), Positives = 155/239 (64%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY++P L+E+P DAE ASHK + R I + + G+YS+LPLG+K ++ + AI+RE Sbjct: 1 MRLSKYYMPTLREDPVDAETASHKFLTRGAFIRKQASGVYSFLPLGKKVINKIEAIVREA 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+S LQ+ ++W SGR++++G EM +L DR+D+ GPT EE T + + Sbjct: 61 MENHDSIEVSTSILQAREIWEASGRWETFGPEMFKLKDRHDREYCLGPTAEEAFTALVKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG+ RSR+FLMKDAYSFD EG + SY KM+ + Sbjct: 121 ELNSYKQLPLNIYQIVDKFRDEKRPRFGINRSRDFLMKDAYSFDADIEGLEISYQKMWDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y+ F ++GL + +SG +GG SHEFI L++TGE + + D D+ E F Sbjct: 181 YVEAFDKMGLDYKIVEGDSGTMGGKKSHEFIALSETGEGVILYTDD-SDYAATDEKARF 238 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/160 (45%), Positives = 96/160 (60%), Gaps = 5/160 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIEVG+IF GTKYS + A F +GK MGSYGIG R V+A++E HD KG Sbjct: 402 AARGIEVGNIFQLGTKYSESLEAYFLDENGKQKPFIMGSYGIGISRSVSAIVEQYHDDKG 461 Query: 338 IIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 I+WP SVAPF+ +++INI +Q ++ EKIY RL + DV DD E+ G +F Sbjct: 462 IVWPTSVAPFEAIVTIININKDEQ--KELGEKIYQRLREERIDVILDDRKERAGVKFNDR 519 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DL+G P ++ VG K +D VE R E +S E I Sbjct: 520 DLIGIPYRITVG-KDAADDIVEYSTRKDMENEKISSSEAI 558 >gi|255322659|ref|ZP_05363803.1| prolyl-tRNA synthetase [Campylobacter showae RM3277] gi|255300220|gb|EET79493.1| prolyl-tRNA synthetase [Campylobacter showae RM3277] Length = 570 Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 110/239 (46%), Positives = 151/239 (63%), Gaps = 10/239 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P +E P+DA +ASHK +LR G Q G+Y++LPLG++ L+N+ I++EE Sbjct: 1 MKFSKLYAPTAKEAPKDASLASHKFLLRAGYAEQVGSGLYNFLPLGKRVLENIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+S+ + SADLW ESGR+D YGKE+LR DR + + PT+EE + + R Sbjct: 61 LDEAGAQEISMSFVTSADLWRESGRFDVYGKELLRFKDRKENDFVLSPTNEESVVALVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG++R REFLMKD YSF E ++ M + Sbjct: 121 KVTSYKQLPLNLYQINTKFRDEARPRFGLLRGREFLMKDGYSFHANAEDLDREFDLMEKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y +IF RLGL +RA+SG IGG S EF+VLA++GE + I EN D+ Sbjct: 181 YSKIFTRLGLNFRAVRADSGAIGGSGSKEFMVLANSGEDDI----------IVCENCDY 229 Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 92/157 (58%), Gaps = 1/157 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++GIEVGHIF GTKYS PM ATF +GK MG YGIG R+VA +E+SHD KGI Sbjct: 409 SKGIEVGHIFKLGTKYSEPMGATFLDENGKAKPFIMGCYGIGVSRLVAVAVEASHDEKGI 468 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IW +++APFK +I D+ + +Y L G V DD E+ G + + +L+ Sbjct: 469 IWNETLAPFKFEIIVSNLKDEEGVKFAQGLYEDLRGAGVSVLLDDRNERFGVKMSEFELM 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 GFP VIVG K +++ VE+ R +E + E++ Sbjct: 529 GFPYAVIVG-KGLAEGTVELVTRDGLAKETVKASEIL 564 >gi|223040968|ref|ZP_03611229.1| prolyl-tRNA synthetase [Campylobacter rectus RM3267] gi|222877765|gb|EEF12885.1| prolyl-tRNA synthetase [Campylobacter rectus RM3267] Length = 570 Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 110/239 (46%), Positives = 151/239 (63%), Gaps = 10/239 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P +E P+DA +ASHK +LR G Q G+Y++LPLG++ L+N+ I++EE Sbjct: 1 MKFSKLYAPTAKEAPKDASLASHKFLLRAGYAEQVGSGLYNFLPLGKRVLENIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+S+ + SADLW ESGR+D YGKE+LR DR + + PT+EE + + R Sbjct: 61 LDEAGAQEISMSFVTSADLWRESGRFDVYGKELLRFKDRKENDFVLSPTNEESVVALVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG++R REFLMKD YSF E ++ M + Sbjct: 121 KVTSYKQLPLNLYQINTKFRDEARPRFGLLRGREFLMKDGYSFHANAEDLDREFDLMEKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y +IF RLGL +RA+SG IGG S EF+VLA++GE + I EN D+ Sbjct: 181 YSKIFTRLGLNFRAVRADSGAIGGSGSKEFMVLANSGEDDI----------IVCENCDY 229 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 84/240 (35%), Positives = 124/240 (51%), Gaps = 19/240 (7%) Query: 199 SGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAA 258 GP+G +I GE+Q+ C + D+ + + S NS E++ Sbjct: 341 CGPVGLKGVEFYIDKELEGESQMICGANERDYHFVGVS-----VSSFNS--ERF------ 387 Query: 259 TSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ K D P N VS +GIEVGHIF GTKYS PM+ATF +GK MG Sbjct: 388 -KDLTAVKAGDKCPCCGGNLSVS-KGIEVGHIFKLGTKYSEPMNATFLDENGKAKPFIMG 445 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R+VA +E+ HD KGIIW ++++PFK +I D+ + +Y L + Sbjct: 446 CYGIGVSRLVAVAVEAKHDEKGIIWNETLSPFKFEIIISNLKDEEGVKFAQGLYEDLREA 505 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD E+ G + + +L+GFP VIVG K +++ VE+ R ++E + E++ Sbjct: 506 GVSVLLDDRNERFGVKMSEFELMGFPYAVIVG-KGLAEGTVELVTRGGLVKETVKASEIL 564 >gi|195125579|ref|XP_002007255.1| GI12837 [Drosophila mojavensis] gi|193918864|gb|EDW17731.1| GI12837 [Drosophila mojavensis] Length = 460 Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 146/459 (31%), Positives = 231/459 (50%), Gaps = 49/459 (10%) Query: 2 RRSKYFLPILQENPRDAEI-------ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G++ S G Y +P+ Q+ALD Sbjct: 3 KASRLFCPALI-IPKNAVVKQTEQLSVSQKLLTELGLVKSGSNGTYQIMPIAQRALDKCI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ G ++S+P L LW ++GR D E + DR+ K + PTHEE + Sbjct: 62 NLVQRNMQEAGGQKISLPVLTPTQLWKKTGRLDGDISEFYMVRDRSGKQFLMSPTHEEAI 121 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP YQI KFRDEL+ RFG+MR++EFLMKD Y+FD++ E ++ + Sbjct: 122 TAMLATTAPISYRQLPLLLYQIGPKFRDELKSRFGLMRAKEFLMKDMYTFDVSKEKAELT 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y + +Y R F +L + + + A +G +GG LSHE+ ++ GE Sbjct: 182 YATVSEAYERFFRQLEVPFVKVEAATGIMGGSLSHEYHYISPVGE--------------- 226 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS---ARGIEVGHIFYF 290 D +++ +S YA ++V E + P + RG+EV H F Sbjct: 227 ------DTLLNCSS------CGYAGNAEVFGEDATSTCPNCQSTQLNRVRGVEVAHTFLL 274 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 G KYS P+ AT+ GK + MG YGIG R++AA +E + WP +AP+ + Sbjct: 275 GDKYSKPLGATYLNTSGKPETLVMGCYGIGITRIIAAALEVLSTEHELRWPTLLAPYDVC 334 Query: 351 LINIK--AHDQVCRDACEK-IYARLSKVGC---DVFWDDMGE-QIGSQFAVADLLGFPLQ 403 LI K + +QV + E + +L++V C + DD E IG + A LG PL Sbjct: 335 LIGPKQGSKEQVSGERIESDLLQQLTQV-CGAEQLLHDDRKELTIGKRLMEAKRLGHPLT 393 Query: 404 VIVGSKFVSDSKVEIKHRLTGIRE-DMSLEEVIN-YASH 440 V+VG+K +++ +G ++++ EV+ ASH Sbjct: 394 VVVGAKATQGEAPKLELHASGAETVELNITEVLERVASH 432 >gi|298489744|ref|YP_003719921.1| prolyl-tRNA synthetase ['Nostoc azollae' 0708] gi|298231662|gb|ADI62798.1| prolyl-tRNA synthetase ['Nostoc azollae' 0708] Length = 597 Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 114/229 (49%), Positives = 150/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S L+++P DAEI SH+L+LR G I + G+Y++LPL + L V+ I+REE Sbjct: 1 MRLSNKLFVTLRDDPGDAEIPSHQLLLRAGYIRRIGSGVYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ A+LW +SGR+D+Y K M L DR ++ + GPTHEEV+T + Sbjct: 61 MNATGAEECLLPQLQPAELWKDSGRWDTYTKAEGIMFSLIDRREQQLGLGPTHEEVITTV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MRSREF+MKD YSF E K +Y M Sbjct: 121 ARDMIRSYRQLPLHLYQIQTKFRDEIRPRFGLMRSREFIMKDGYSFHTDEESLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + +Y + R GL + A+SG IGG S EF+VLAD GE +V ++D Sbjct: 181 YQAYSNMLRRAGLAFRAVEADSGAIGGSGSTEFMVLADAGEDEVLYTED 229 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 101/167 (60%), Gaps = 5/167 (2%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P +ARGIEVGHIF GTKYS M AT+ G+ + MG YG+G R+ + +E Sbjct: 427 PSQTLKTARGIEVGHIFQLGTKYSEAMGATYINEQGEKKPLIMGCYGVGVSRLAQSAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 S+D GIIWP ++AP+ I++ NIK Q+ + EK+Y L+K G + DD E+ G Sbjct: 487 SYDKDGIIWPVAIAPYHSIITIPNIKDAQQI--EVAEKLYTELNKAGVETLLDDRDERAG 544 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +F ADL+G P +++ G + +++ KVE+ R + +++EEV+N Sbjct: 545 VKFKDADLIGIPFRIVTG-RAIANGKVEVVKRANRESQQIAIEEVVN 590 >gi|21672515|ref|NP_660582.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009415|sp|Q8K9S2|SYP_BUCAP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|21623136|gb|AAM67793.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 571 Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L+E P A+I SH+LML++GMI + S GIY WLP G + L+ + II+ E Sbjct: 1 MRASKYLFSTLKETPHHAKIISHQLMLKSGMIRKLSSGIYIWLPTGIRVLNKIKDIIKNE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+E+ +P +Q LW SGR YG+E+ + DR ++ I GPT+EEV+T+ R+ Sbjct: 61 MRKINALEVLMPVVQPKKLWENSGRLSIYGEELFQFYDRRNQKFILGPTNEEVVTNFIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I S++ LP YQIQ KFRDE+RPRFG++RSREF+MKDAYSF + + +YN + S Sbjct: 121 EINSFKELPLIIYQIQTKFRDEIRPRFGIVRSREFIMKDAYSFHINKHCLEKTYNDFYQS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y+ IF+++ ++ + A+SG +GG +SHEF L++ GE ++ SK+ Sbjct: 181 YINIFNKIKIQFRAVNADSGSMGGSISHEFQALSENGEDEIVFSKN 226 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 93/165 (56%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + IE+GHIF G +YS M+ + ++ MG YGIG R+VA+VIE ++D GII Sbjct: 405 KSIEIGHIFQLGKEYSKKMNVLVQEQHNNYKHIHMGCYGIGITRIVASVIEQNYDDNGII 464 Query: 340 WPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPDS+APF++ ++ + + + ++ E +Y L K DV D E+ G F DL+ Sbjct: 465 WPDSIAPFQVVILPLNTKNCIKIKEITENLYKILKKEKIDVILYDRNERPGIMFNQIDLI 524 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P Q+I+ + ++++KVE + R + ++E+ + + + Sbjct: 525 GIPHQIIISPRHINENKVEYRERKNNKSTLIKVKEITYFLKKKLN 569 >gi|307154337|ref|YP_003889721.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7822] gi|306984565|gb|ADN16446.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7822] Length = 600 Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 116/229 (50%), Positives = 148/229 (64%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIKSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P LQ ++LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNAIGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFALGDRQERELGLGPTHEEVITFI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF K +Y M Sbjct: 121 AREMIRSYRQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHTDETSLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y +F R GL + A+SG IGG S EF+VLAD GE +V + D Sbjct: 181 DQAYRNMFRRCGLAFRGVEADSGAIGGSGSQEFMVLADAGEDEVLYTAD 229 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 100/165 (60%), Gaps = 1/165 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIEVGHIF GTKYS M AT+ G++ + MG YG+G R+ A +E Sbjct: 427 PTQTLQSARGIEVGHIFQLGTKYSQAMGATYTNEQGEEIPLVMGCYGMGVSRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP+ ++ +D + + EK+Y L++VG + DD + G + Sbjct: 487 SYDKDGIIWPVAIAPYHAIVVIPDLNDPLQVETAEKLYQELNQVGVETLLDDRDARAGVK 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 F ++L+G P +++ G + + D KVE+ R + +D+++EEV++ Sbjct: 547 FKDSELIGIPYRIVTG-RSLKDGKVEVVERASKKSQDIAIEEVVS 590 >gi|219681610|ref|YP_002467996.1| prolyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682167|ref|YP_002468551.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471296|ref|ZP_05635295.1| prolyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254782890|sp|B8D937|SYP_BUCA5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782891|sp|B8D7E1|SYP_BUCAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219621900|gb|ACL30056.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624453|gb|ACL30608.1| prolyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086555|gb|ADP66636.1| prolyl-tRNA synthetase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087136|gb|ADP67216.1| prolyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087672|gb|ADP67751.1| prolyl-tRNA synthetase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 572 Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 105/226 (46%), Positives = 149/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M S+Y L ++ P DA+I SH+LM+R+GMI + S G+Y WLP G + L + II E Sbjct: 1 MLTSQYLLSTSKDIPYDAKIISHQLMIRSGMIRKTSSGLYVWLPTGMRVLKKIKNIITTE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+E+ +P +Q LW ESGR + YG+E+LR DR I GPT+EEV+T+ S Sbjct: 61 MEKINALEILMPIIQPEYLWKESGRLNLYGEELLRFLDRRKNQFILGPTNEEVVTNFIGS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQIQ KFRDE+RPRFG++R+REF MKDAYSF + +++YNK + S Sbjct: 121 EIHSYKQLPLTVYQIQTKFRDEIRPRFGIIRTREFTMKDAYSFHINQSCLENTYNKFYDS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y+ IF ++ L ++A+SG +GG++SHEF + GE ++ S D Sbjct: 181 YINIFKKMNLNFCAVKADSGSMGGNISHEFQAFSQNGEDEIVFSND 226 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 93/165 (56%), Gaps = 3/165 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + IE+GHIF G KYS + + K +G + MG YGIG R+ AAVIE HD GII Sbjct: 407 QSIEIGHIFQLGQKYSRKIQQSVKIKNGNLKNLYMGCYGIGITRIAAAVIEQHHDKNGII 466 Query: 340 WPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WPDS+APF++ + IN+K +++ + +Y + K G DV DD E+ G F DL Sbjct: 467 WPDSIAPFEVVILPINMKKDNKI-KIIAHFLYKKFKKTGIDVILDDRDERPGVMFNEVDL 525 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +G P Q+I+ + ++ VE + R ++++++ N+ + Sbjct: 526 IGIPHQIIISKRSINYDNVEYRERKNKENILINIKDIKNFIIQKL 570 >gi|332705120|ref|ZP_08425202.1| prolyl-tRNA synthetase, family II [Lyngbya majuscula 3L] gi|332356070|gb|EGJ35528.1| prolyl-tRNA synthetase, family II [Lyngbya majuscula 3L] Length = 603 Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 114/229 (49%), Positives = 152/229 (66%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L+E+P +AEI SHKL+LR G I + GIY++LP+ + L V+ I+REE Sbjct: 1 MRLSQMLLVTLREDPVEAEIPSHKLLLRAGYIRRIGSGIYAYLPMMWRVLKKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA E +P LQ ++LW ESGR+D+Y K M L DR + + GPTHEEV+T + Sbjct: 61 MDATGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFALIDRQKRELGLGPTHEEVITTV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E K +Y M Sbjct: 121 AKDMIRSYRQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHTDHESLKKTYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y +F R GL+ + A+SG IGG S EF+VLAD GE ++ ++D Sbjct: 181 DQAYRNMFSRSGLEFRAVEADSGAIGGSGSQEFMVLADAGEDEILYTED 229 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/164 (40%), Positives = 97/164 (59%), Gaps = 1/164 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIEVGHIF GTKYS M AT+ G++ + MG YG+G R+ A +E Sbjct: 427 PNQTLKSARGIEVGHIFQLGTKYSSAMGATYTSEQGEEIPLCMGCYGVGVSRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP+ + + D A EK+Y +L++ G + DD E+ G + Sbjct: 487 SYDKDGIIWPVAIAPYHVIITIPNVGDTQQMAAAEKLYTQLNEAGIETLLDDRNERAGVK 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 F ADL+G P +++ G + + D KVE+ R T ++SLEEV+ Sbjct: 547 FKDADLIGIPYRIVTG-RSLKDGKVEVVERATHKSTELSLEEVL 589 >gi|256847045|ref|ZP_05552491.1| prolyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256715709|gb|EEU30684.1| prolyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 577 Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 112/228 (49%), Positives = 146/228 (64%), Gaps = 1/228 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +E P DAE SHK+M+R G I+Q S G++S+LPL + + V AIIREE Sbjct: 1 MKQSKILIPTKKEAPSDAEALSHKMMIRAGYIYQVSSGVWSYLPLAYRVIRKVKAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A EM P++ ADLW ++GRY++YG + + DRND+ I GPT EEVMT+I R Sbjct: 61 MEKADAFEMETPSMLPADLWQQTGRYEAYGDTLFKFKDRNDREHILGPTDEEVMTEILRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQI KFRDE RPRFGV+R +EF M D YSF G +YN+ + Sbjct: 121 SIKSYKKLPLTVYQITDKFRDEPRPRFGVLRGKEFSMLDGYSFAADQAGLDEAYNQQAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDF 227 Y IF R+GL + A+SG IGGD S EF A GE T V+ D+ Sbjct: 181 YRNIFDRIGLDYKIILADSGTIGGDNSQEFSAPAKVGEDTIVYTDGDY 228 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/156 (42%), Positives = 92/156 (58%), Gaps = 1/156 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIE+GHIF GT YS + A +G+ + MG YGIG R+++AV E + D G++W Sbjct: 408 GIEIGHIFKLGTGYSEKLGAQVLDQNGRLVDMIMGCYGIGVTRLLSAVAEQNADEYGLVW 467 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 PDS+APF + +I + A +I +L K G +V DD E+ G +FA +DL+G Sbjct: 468 PDSIAPFDVHVIPVNAKKADQMKMANEISEQLEKAGLEVLVDDRKERAGVKFADSDLIGI 527 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 PL+V VG K S+ VEIK R TG ++ EEV N Sbjct: 528 PLRVTVGKK-ASEGIVEIKIRKTGETVEVKTEEVAN 562 >gi|237751610|ref|ZP_04582090.1| prolyl-tRNA synthetase [Helicobacter bilis ATCC 43879] gi|229372976|gb|EEO23367.1| prolyl-tRNA synthetase [Helicobacter bilis ATCC 43879] Length = 575 Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 151/226 (66%), Gaps = 2/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +F P L+E P+DA + SH +LR G IHQ GIY++LPL Q +D + I+REE Sbjct: 1 MRFSTFFAPTLKEAPKDAVLKSHIYLLRAGYIHQIGSGIYNFLPLAQIVMDKIKTIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+++ L LW +SGRY+ Y E+ D+ + + GPTHEE +T+I ++ Sbjct: 61 MNRAGANEITMGFLTPTSLWEQSGRYEKYS-ELALFTDKKGASFVLGPTHEECVTEIAKT 119 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ LP YQI LKFRDELRPRFG++R+REF+MKDAYSF + E + M + Sbjct: 120 YIKSYKQLPLNLYQIHLKFRDELRPRFGLLRAREFVMKDAYSFHDSLESLNKEFINMRDT 179 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 Y+RIF RLGL + A+SG IGG S EF+VLA+ GE T V C+K Sbjct: 180 YVRIFSRLGLDFRIVEADSGAIGGSGSREFMVLAECGEDTIVTCAK 225 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 95/159 (59%), Gaps = 6/159 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++GIEVGHIF KYS PM A F ++G MG YG+G R+++A++E D KG Sbjct: 414 SKGIEVGHIFKLEDKYSKPMQANFLLSNGSSMPFTMGCYGLGVSRLISAILEQKADEKGC 473 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W +VAPFK+ +I N+K ++V +Y +L + G +V DD E+ GS+ A + Sbjct: 474 VW-GAVAPFKLDIIISNMKNEEEVL--FATNLYTQLQEKGIEVILDDRNERFGSKIADFE 530 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+GF +IVG + ++++K+E+ R IR + S ++ Sbjct: 531 LIGFEYALIVGKR-LAENKLELIKRDGLIRTEYSSANIL 568 >gi|75908528|ref|YP_322824.1| prolyl-tRNA synthetase [Anabaena variabilis ATCC 29413] gi|114152169|sp|Q3MAQ7|SYP_ANAVT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|75702253|gb|ABA21929.1| Prolyl-tRNA synthetase [Anabaena variabilis ATCC 29413] Length = 604 Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 113/229 (49%), Positives = 150/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLRDDPADAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P LQ ++LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNAAGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFSLIDRREQQLGLGPTHEEVITAI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKD YSF + + K +Y M Sbjct: 121 ARDMIRSYRQLPLHLYQLQTKFRDEIRPRFGLMRGREFIMKDGYSFHVDEDSLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + +Y + R GL P+ A+SG IGG S EF+VLA+ GE +V + D Sbjct: 181 YQAYSNMLRRAGLAFRPVEADSGAIGGSGSTEFMVLAEAGEDEVLYTDD 229 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 100/161 (62%), Gaps = 5/161 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIEVGHIF GTKYS + AT+ G++ + MG YG+G R+ + +E S+D G Sbjct: 433 SARGIEVGHIFQLGTKYSQALGATYTNEQGEEKPLVMGCYGVGVSRLAQSAVEQSYDKDG 492 Query: 338 IIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP+ +++ NI QV + E++Y L++ G + DD E+ G +F A Sbjct: 493 IIWPVAIAPYHAIVTIPNINDAQQV--EIAERLYTELNQSGVETLLDDRNERAGVKFKDA 550 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DL+G P +++ G + +++ KVEI R T +++ ++EVI Sbjct: 551 DLIGIPYRIVTG-RAITNGKVEIVERATRQSQEIPIDEVIT 590 >gi|257060371|ref|YP_003138259.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8802] gi|256590537|gb|ACV01424.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8802] Length = 598 Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 113/229 (49%), Positives = 151/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P LQ A+LW ESGR+++Y K M L DR D + GPTHEEV+T I Sbjct: 61 MNAAGAQECLLPQLQPAELWRESGRWETYTKAEGIMFSLIDRRDTELGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + + K +Y M Sbjct: 121 AKEMIRSYRQLPVNLYQIQSKFRDEIRPRFGLMRGREFIMKDAYSFHASEDSLKETYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y + R GL+ ++A+SG IGG S EF++LA+ GE +V ++D Sbjct: 181 DQAYRNMITRCGLEFRAVQADSGAIGGSASQEFMILAEAGEDEVLYTED 229 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 95/158 (60%), Gaps = 1/158 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIEVGHIF G KYS M ATF G++ + MG YG+G R+ A +E S+D G Sbjct: 433 TARGIEVGHIFQLGVKYSQAMGATFTNEQGEEKPLIMGCYGVGVSRLAQAAVEQSYDKDG 492 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP ++AP+ ++ +D + EK+Y L+KVG + DD E+ G +F A+L Sbjct: 493 IIWPVAIAPYHAVVVIPNINDAQQVEVAEKLYTELNKVGVETLLDDRDERAGVKFKDAEL 552 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G P +++ G S KVE+ R T +++++++V+ Sbjct: 553 IGIPYRIVTGRSLQS-GKVELVERSTKNSQEIAIDQVV 589 >gi|158291808|ref|XP_313346.3| AGAP003589-PA [Anopheles gambiae str. PEST] gi|157017465|gb|EAA08954.3| AGAP003589-PA [Anopheles gambiae str. PEST] Length = 461 Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 146/446 (32%), Positives = 220/446 (49%), Gaps = 63/446 (14%) Query: 2 RRSKYFLPILQENPRDAEIASH-------KLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 R SK F P L P++A I S +LML G+I Q G + LPL Q++L Sbjct: 3 RVSKLFQPALI-IPKNATIKSQDITSKSQRLMLEQGLIRQAGNGTFYLLPLLQRSLQKAV 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYD----SYGKEMLRLADRNDKAMIYGPTH 110 +I GA +M +P L SA+LW +SGR E+L+ DR+ K I GPTH Sbjct: 62 DLIDRHMEAVGAQKMVLPLLTSAELWKKSGRLSVTEAGTPTELLQTTDRHGKVQILGPTH 121 Query: 111 EEVMTDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEG 169 EE +T + + +YR P YQI KFRDE++PRFG+MR++EFLMKD Y+FD+ G Sbjct: 122 EESITSLLAAIAPVTYRQFPLRLYQISTKFRDEMKPRFGLMRAKEFLMKDLYTFDVDRAG 181 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFM 228 + +Y+ + +Y R+F +G+ + + + G +GG LSHE+ ++ GE ++ C++ M Sbjct: 182 CQETYDSVNEAYGRLFREIGVPFVKVAGDCGTMGGSLSHEYHFPSEVGEDELIRCTRCGM 241 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR-------- 280 N +LF +L E + Sbjct: 242 H---------------------------------TNAELFPALSERCKSCETGSDTFERQ 268 Query: 281 -GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 GIEV H F +Y+ + AT A+GK +QMG YGIG R++AA IE K I Sbjct: 269 AGIEVAHAFILEDRYTKALGATCLAANGKPVPLQMGCYGIGVTRLLAASIEVLSSEKEIR 328 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKI------YARLSKVGCDVFWDDMGE-QIGSQF 392 WP ++AP+++ +I KA + A + L+ DV DD + IG + Sbjct: 329 WPVALAPYRVCIITPKAGSKEEAQATPWVGKLHDDLQSLANCAGDVIVDDRTQLTIGKRL 388 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEI 418 +G+P+ V+VG+K S+ K+E+ Sbjct: 389 LDTRKMGYPVIVVVGAKAASEKKLEL 414 >gi|302411110|ref|XP_003003388.1| prolyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] gi|261357293|gb|EEY19721.1| prolyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] Length = 474 Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 133/432 (30%), Positives = 217/432 (50%), Gaps = 33/432 (7%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +H ++R G++ Q GI+ LP+G + + ++I + GA +++ ++ S LW Sbjct: 56 AHDKLIRAGLLRQSHSGIFHLLPMGYRIQSKLESLIDKYMQSLGASRVALSSITSKKLWQ 115 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 +SGRY+ G E+ DR + PTHEE +T + +KSY+ LP YQ K+RD Sbjct: 116 QSGRYEKLGSELFNFQDRRGADYMLAPTHEEEVTSLVAQSVKSYKELPLRLYQTTRKYRD 175 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 ELRPR G++R+REF MKD Y+FD+ + +Y ++ +Y F LGL + RA SG Sbjct: 176 ELRPRHGLLRTREFTMKDLYTFDVDTSAAIQTYEQVQGAYASFFGSLGLPVVKARAGSGD 235 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD 261 +GGDLSHE+ + GE D + N +F ++NS + + A +A Sbjct: 236 MGGDLSHEYHFTSPIGE----------DLIMKCNNCEF----AVNSDIAEQPANDSAMDA 281 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA------TFKG--------ADG 307 H K E K +EVGH F+ GT+YS P+ A T +G A Sbjct: 282 QHCPKCEAGTLEVKEA----LEVGHTFHLGTRYSEPLGARIALPTTSQGDSQSADTSAAR 337 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 ++QMG +GIG R++ AV E D G+ WP +++P+++ ++ + + Sbjct: 338 ASTHIQMGCHGIGVSRLIGAVAEHFADPVGLQWPRAISPYEVEIVFADGLEAQAVQIYDD 397 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + LS DV DD + + ADL G+P+ V++G + +E++ R GI+E Sbjct: 398 VVHGLSHT-TDVLLDDRPVSLPWKLKDADLTGYPIVVVLGQVWKKTGNIELQCRRLGIKE 456 Query: 428 DMSLEEVINYAS 439 + +++ S Sbjct: 457 TVQPSDILQRIS 468 >gi|218248302|ref|YP_002373673.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8801] gi|226699137|sp|B7K1H5|SYP_CYAP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218168780|gb|ACK67517.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8801] Length = 598 Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 113/229 (49%), Positives = 151/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P LQ A+LW ESGR+++Y K M L DR D + GPTHEEV+T I Sbjct: 61 MNAAGAQECLLPQLQPAELWRESGRWETYTKAEGIMFSLIDRRDTELGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + + K +Y M Sbjct: 121 AKEMIRSYRQLPVNLYQIQSKFRDEIRPRFGLMRGREFIMKDAYSFHASEDSLKETYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y + R GL+ ++A+SG IGG S EF++LA+ GE +V ++D Sbjct: 181 DQAYRNMITRCGLEFRAVQADSGAIGGSASQEFMILAEAGEDEVLYTED 229 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 95/158 (60%), Gaps = 1/158 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIEVGHIF G KYS M ATF G++ + MG YG+G R+ A +E S+D G Sbjct: 433 TARGIEVGHIFQLGVKYSQAMGATFTNEQGEEKPLIMGCYGVGVSRLAQAAVEQSYDKDG 492 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP ++AP+ ++ +D + EK+Y L+KVG + DD E+ G +F A+L Sbjct: 493 IIWPVAIAPYHAVVVIPNINDAQQVEVAEKLYTELNKVGVETLLDDRDERAGVKFKDAEL 552 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G P +++ G S KVE+ R T +++++++V+ Sbjct: 553 IGIPYRIVTGRSLQS-GKVELVERSTKNSQEIAIDQVV 589 >gi|113475053|ref|YP_721114.1| prolyl-tRNA synthetase [Trichodesmium erythraeum IMS101] gi|123161090|sp|Q116D3|SYP_TRIEI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|110166101|gb|ABG50641.1| prolyl-tRNA synthetase [Trichodesmium erythraeum IMS101] Length = 601 Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 115/252 (45%), Positives = 159/252 (63%), Gaps = 12/252 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L+++P +AEI SHKL++R G I + GIY++LPL + ++ V+ I+REE Sbjct: 1 MRLSQMLLVTLRDDPAEAEIPSHKLLIRAGYIRRIGNGIYAYLPLMLRVINKVSTIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ A+LW ESGR+D+Y + M L DR ++ + GPTHEEV+T I Sbjct: 61 MNATGAQECLLPQLQPAELWQESGRWDTYTQAEGIMFSLIDRQNRELGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKD YSF E K +Y M Sbjct: 121 AKDIIRSYRQLPIHLYQLQTKFRDEIRPRFGLMRGREFIMKDGYSFHADEESLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD---------FM 228 +Y + R GL+ + A+SG IGG S EF+VLAD GE ++ ++D + Sbjct: 181 DKAYRNMLRRSGLQFRAVDADSGAIGGSASQEFMVLADAGEDEILYTQDGKYAANMEKAI 240 Query: 229 DFPIPSENTDFD 240 P+ E + FD Sbjct: 241 SLPVDVEASPFD 252 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 5/167 (2%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P +ARGIEVGHIF GTKYS M AT+ G++ + MG YG+G R+ A +E Sbjct: 427 PSKTLETARGIEVGHIFQLGTKYSEAMGATYTNEQGQEVPLLMGCYGVGVSRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 S+D GIIWP ++AP+ I + NIK Q+ + +Y L++ G D DD E+ G Sbjct: 487 SYDKDGIIWPVAIAPYHVVICIPNIKDTQQI--EVAGNLYKELNEAGIDTILDDRDERAG 544 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +F ADL+G P +++ G S KVE+ R T +++ + +V++ Sbjct: 545 VKFKDADLIGIPYRIVTGRSLKS-GKVELIERSTHQCQEIVVAQVLS 590 >gi|195375658|ref|XP_002046617.1| GJ12980 [Drosophila virilis] gi|194153775|gb|EDW68959.1| GJ12980 [Drosophila virilis] Length = 464 Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 140/455 (30%), Positives = 232/455 (50%), Gaps = 39/455 (8%) Query: 2 RRSKYFLPILQENPRDAEIA-------SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P+L P++A + S KL++ G+I S G Y +P+ Q+ +D Sbjct: 3 KASRLFWPVLI-TPKNAVVKQTEQLSRSQKLLMELGLIKSGSNGTYQIMPIAQRVVDKCI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 ++++ G ++S+P L A LW ++GR + E + DR+ K + PTHEE + Sbjct: 62 SLVQRNMQEAGGQKISLPVLTPAQLWKKTGRLEGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP YQI KFRDEL+ RFG+MR++EFLMKD Y+FD++ E ++ + Sbjct: 122 TAMLATAAPISYRQLPLRLYQIGPKFRDELKSRFGLMRAKEFLMKDMYTFDVSKEAAECT 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y + +Y R F +L + + + A +G +GG LSHE+ ++ GE Sbjct: 182 YATVSDAYERFFRQLEVPFVKVEAATGIMGGSLSHEYHYISPVGE--------------- 226 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 D +++ ++ A SD S + RG+EV H F G K Sbjct: 227 ------DTLLNCSACGYAGNAEVLG-SDAETASTCPSCQSTQLSRVRGVEVAHTFLLGDK 279 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 YS P+ ATF GK +QMG YG+G RV+AA +E + + WP +AP+ + LI Sbjct: 280 YSKPLGATFLNKSGKPETLQMGCYGVGITRVIAAALEVLSTEQELRWPKLLAPYDVCLIG 339 Query: 354 IK--AHDQVCRDACE-KIYARLSKV-GCDVFWDDMGEQ--IGSQFAVADLLGFPLQVIVG 407 K + +Q + E ++ +L+++ G + D ++ IG + A LG PL ++VG Sbjct: 340 PKQGSKEQAPVERLENELLQQLTQICGAEQLLHDERKELTIGKRLLDAKRLGHPLTIVVG 399 Query: 408 SKFVSDSKVEIKHRLTGIRE-DMSLEEVIN-YASH 440 +K +++ +G + ++S EV+ A+H Sbjct: 400 AKAAQQEAPQLELHASGAEKMELSAAEVLRVVATH 434 >gi|170078264|ref|YP_001734902.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7002] gi|226701348|sp|B1XP53|SYP_SYNP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169885933|gb|ACA99646.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7002] Length = 601 Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 114/229 (49%), Positives = 151/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P DAEI SHKL+LR G I + +GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQSLFVTLREDPADAEIPSHKLLLRAGYIRRIGRGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ A++W ESGR+D+Y + M L DR D + GPTHEEV+T I Sbjct: 61 MNATGAQETLLPQLQPAEIWQESGRWDTYTQAEGIMFSLRDRLDGELGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + E K +Y M Sbjct: 121 AKDMIRSYRQLPQHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHASEECLKKTYADM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y + R GL+ + A+SG IGG S EF++LAD GE ++ ++D Sbjct: 181 DQAYRNMLRRCGLQFRAVEADSGAIGGSGSQEFMILADAGEDEILYTED 229 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/160 (43%), Positives = 102/160 (63%), Gaps = 5/160 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIE GHIF GTKYS M ATF +GK+H + MG YG+G R+ A +E S+D G Sbjct: 433 TARGIEAGHIFQLGTKYSEAMGATFTDENGKEHPLVMGCYGVGVSRLAQAAVEQSYDENG 492 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP+ ++ N+K+ +Q+ A EK+YA L+ G + DD E+ G +F A Sbjct: 493 IIWPVAIAPYHAVVVVPNVKSEEQMA--AAEKLYADLNAAGVETILDDRNERAGVKFKDA 550 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+G P +V+ G K + D KVE+ R G R+D+ L+ V+ Sbjct: 551 ELIGIPFRVVTG-KSLKDGKVEVVRRKEGDRQDLDLDAVV 589 >gi|119511594|ref|ZP_01630701.1| prolyl-tRNA synthetase [Nodularia spumigena CCY9414] gi|119463755|gb|EAW44685.1| prolyl-tRNA synthetase [Nodularia spumigena CCY9414] Length = 602 Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 114/229 (49%), Positives = 149/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLRDDPADAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N T A E +P LQ A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T + Sbjct: 61 MNATNAQECLLPQLQPAELWKESGRWDTYTKAEGIMFSLIDRREQQLGLGPTHEEVITTV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + K +Y M Sbjct: 121 ARDMIRSYRQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHVDEVSLKETYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + +Y + R GL + A+SG IGG S EF+VLAD GE +V ++D Sbjct: 181 YQAYSNMLRRSGLAFRAVEADSGAIGGSGSTEFMVLADAGEDEVLYTED 229 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 68/167 (40%), Positives = 108/167 (64%), Gaps = 5/167 (2%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 PE +ARGIEVGHIF GTKYS MSAT+ G+++ + MG YG+G R+ + +E Sbjct: 427 PEQTLQTARGIEVGHIFQLGTKYSQAMSATYTNEQGEENPLFMGCYGVGVSRLAQSAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 S+D GIIWP ++AP+ +++ NIK QV + +K+Y +L+K G + DD E+ G Sbjct: 487 SYDKDGIIWPVAIAPYHAIVTIPNIKDAQQV--EIAQKLYTQLNKAGVETLLDDRDERAG 544 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +F ADL+G P +++ G + +++ KVE+ R T +++++EEV+N Sbjct: 545 VKFKDADLIGIPYRIVTG-RAINNGKVEVVKRATRETQEIAIEEVVN 590 >gi|71892071|ref|YP_277801.1| prolyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|114152172|sp|Q493B4|SYP_BLOPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71796177|gb|AAZ40928.1| prolyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 581 Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 102/221 (46%), Positives = 149/221 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P++ + SH+LMLR G+I Q S G+Y+WLP G + L + IIREE Sbjct: 1 MRTSQYLLATLKEAPKNCKAISHQLMLRAGLIRQVSSGLYTWLPTGLRVLRKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GAIE+++P +Q A LW +SGR+ YG E+LR +RN++ + GPTHEE++++I Sbjct: 61 MSKIGAIEIAMPIVQPARLWKKSGRWTGYGTELLRFKNRNNQEFVLGPTHEEMVSEIICK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 Y+ P YQI K+RDE RPR GV+R+REF+MKD YSF + + +++YN M+ + Sbjct: 121 ETMLYKQFPLIVYQIHTKYRDEARPRSGVIRAREFIMKDGYSFHINQKSLQNTYNNMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF+R+GL ++AE G IGG LSHEF ++ GE + Sbjct: 181 YHTIFNRIGLNFCVVQAEPGKIGGALSHEFQAYSENGEDSI 221 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 68/188 (36%), Positives = 110/188 (58%), Gaps = 6/188 (3%) Query: 256 YAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKY-SLPMSATFKGADGKDHY- 311 ++ +D+H +S K + + IE+GHIF G KY +L + + K + K + Sbjct: 386 FSKVADLHEVLHHNSYTNKKNILSIHNCIEIGHIFQLGQKYLNLHTNYSQKNNEHKHNLS 445 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYA 370 ++MG YGIG R++A +IE ++D GI+WPD +APFK+++I I + V R+ EKIY Sbjct: 446 MEMGCYGIGITRIIAVIIEQNYDKNGILWPDVIAPFKLAIIPIDMYRSVNVRNIAEKIYT 505 Query: 371 R-LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 + LS +G D+ DD E G+ FA DL+G P +I+ + +++ +VE K+R E + Sbjct: 506 QLLSVIGIDILIDDRKEYPGTMFADIDLIGIPHILIISDRSLANQEVEYKYRKKNKIEKI 565 Query: 430 SLEEVINY 437 LE +I Y Sbjct: 566 KLEMLIRY 573 >gi|194749304|ref|XP_001957079.1| GF10245 [Drosophila ananassae] gi|190624361|gb|EDV39885.1| GF10245 [Drosophila ananassae] Length = 458 Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 147/465 (31%), Positives = 233/465 (50%), Gaps = 46/465 (9%) Query: 2 RRSKYFLPILQENPRDAEIA-------SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G+I S G Y +P+ Q++LD + Sbjct: 3 KASRLFCPALI-TPKNAVVKQTEQLSRSQKLLTDLGLIKSGSNGTYQIMPIAQRSLDKLI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ G ++S+P L + LW ++GR + E + DR+ K + PTHEE + Sbjct: 62 DLVQSNMQLAGGQKISLPILTPSALWKKTGRLEGDISEFYMVRDRSGKQFLMSPTHEEAI 121 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP YQI KFRDEL+ RFG+MR++EFLMKD YSFD++ E ++ S Sbjct: 122 TAMLATTSPISYRQLPLRLYQIGPKFRDELKSRFGLMRAKEFLMKDMYSFDVSEETARES 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y+ + +Y R+F +L + + + A +G +GG LSHE+ ++ GE Sbjct: 182 YSAVSEAYDRLFQQLEVPFVKVNAATGMMGGSLSHEYHYVSTVGE--------------- 226 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDV-HNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 +S+V+ + +A S+V + S + RG+E+ H F G Sbjct: 227 ------------DSLVQCTSCGFAGNSEVLTTPENCPSCQSSNLNEVRGVEIAHTFLLGD 274 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS P+ ATF GK V MG YGIG RV+AA +E + + WP +APF + LI Sbjct: 275 KYSTPLGATFLNTSGKPQSVIMGCYGIGITRVIAAALEVFSSEQELQWPKLLAPFDVCLI 334 Query: 353 NIKAHDQVCRDACEKIYARLSKVG--C---DVFWDDMGE-QIGSQFAVADLLGFPLQVIV 406 K + + A L+ VG C ++ DD + IG + A LG PL ++V Sbjct: 335 GPKQGSKEQQPAEVIENELLNSVGQLCGPQELLHDDRKDLTIGKRLLEAKRLGHPLTIVV 394 Query: 407 GSKFVSDS--KVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 G K + K+E+ H G + ++ L E + + + + +L Sbjct: 395 GGKAIQQDSPKLEV-HFNGGDKLELDLSETLKLVAEHSRHKKDLL 438 >gi|172039373|ref|YP_001805874.1| prolyl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|171700827|gb|ACB53808.1| prolyl-tRNA synthetase [Cyanothece sp. ATCC 51142] Length = 623 Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 112/229 (48%), Positives = 150/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 21 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 80 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P LQ ++LW ESGR+++Y K M L DR D+ + GPTHEEV+T + Sbjct: 81 MNAAGAQECLLPQLQPSELWKESGRWETYTKAEGIMFSLIDRQDRELGLGPTHEEVITTV 140 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF+ + SY+ M Sbjct: 141 AKDMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFNEDEASLQRSYDAM 200 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y I R GL + A+SG IGG S EF++LA+ GE +V ++D Sbjct: 201 DQAYRNIISRCGLAYRAVEADSGAIGGSASQEFMILAEAGEDEVLYTED 249 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 98/158 (62%), Gaps = 1/158 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIEVGHIF GTKYS M ATF +G++ + MG YG+G R+ A +E S+D G Sbjct: 453 SARGIEVGHIFQLGTKYSEAMGATFTDENGEEKPIVMGCYGVGVSRLAQAAVEQSYDKDG 512 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP ++AP+++ +I +DQ + + +Y +L+K+G + DD E+ G +F ADL Sbjct: 513 IIWPVAIAPYQVIIIVPNINDQNQIEVAQNLYDKLNKMGVETLLDDRDERAGVKFKDADL 572 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G P +V+ G S KVE+ R + +++ ++ ++ Sbjct: 573 IGIPYRVVTGRSLKS-GKVEVVTRKSKESQEIEVKNLV 609 >gi|217076405|ref|YP_002334121.1| prolyl-tRNA synthetase [Thermosipho africanus TCF52B] gi|226701439|sp|B7IFB6|SYP_THEAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|217036258|gb|ACJ74780.1| prolyl-tRNA synthetase [Thermosipho africanus TCF52B] Length = 561 Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 104/224 (46%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+E+P DAEI S L+ R G I + + G+Y++LPL ++ L + I+REE Sbjct: 1 MRFSRLYAPTLREDPSDAEIPSQALLQRAGFIRKIAAGVYTYLPLARRTLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ +P +Q A+LW SGR+D YG EM++L DR+++ GPTHEE++T++ R+ Sbjct: 61 MDKIGAQEILMPIIQPAELWQRSGRWDDYGPEMMKLKDRHNRDFTLGPTHEELVTELIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP + YQI KFRDE+RPRFGV+R+REF+MKDAYSF + E +Y + Sbjct: 121 ELNSYKQLPVSLYQITTKFRDEIRPRFGVLRAREFIMKDAYSFHDSWESLDETYQLFKDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y +I R+GL+ + A +G IGG+ SHEF+ A+TGE+ V +C Sbjct: 181 YSKIMERIGLRYSVIEAATGAIGGNESHEFVAFANTGESNVLYC 224 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIE+GHIF GTKYS M + DGK MG YG G R + A++E HD GII Sbjct: 402 KGIELGHIFKLGTKYSDSMDVKYMDKDGKMKSFIMGCYGWGISRTLGAIVEQLHDDDGII 461 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP SVAP+++ ++ + + EK+Y+ L G DV DD G +F ADL+G Sbjct: 462 WPRSVAPYEVDIVVVGKEKEKE--FSEKLYSYLLDKGVDVIIDDRNVSPGVKFKDADLIG 519 Query: 400 FPLQVIVGSKFVSDSKVEIKHR-LTGIREDMSLEEVIN 436 FP+++ VG K + + KVEIK R I D ++E+++N Sbjct: 520 FPIRITVGRK-LKEGKVEIKERGKEAILVDANMEQILN 556 >gi|87302633|ref|ZP_01085450.1| prolyl-tRNA synthetase [Synechococcus sp. WH 5701] gi|87282977|gb|EAQ74934.1| prolyl-tRNA synthetase [Synechococcus sp. WH 5701] Length = 610 Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 109/229 (47%), Positives = 152/229 (66%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L+++P +AEI SHKL+LR G + + + G+Y++LPL + L ++AI+R+E Sbjct: 1 MRVSRLMLVTLRDDPAEAEIPSHKLLLRGGYMRRVASGVYAYLPLLWRVLSKISAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA+E +P LQ A LW SGR+ Y M L DR ++++ GPTHEEV+T + Sbjct: 61 MDATGALETLLPALQPASLWERSGRWQGYTAGEGIMFHLVDRQERSLGLGPTHEEVITAL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y +M Sbjct: 121 AADLLRSYRQLPVTLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEADLRLTYQRM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y RIF R GL+++ + A+SG IGG S EF+V AD GE + S D Sbjct: 181 DQAYRRIFSRCGLRTVAVEADSGAIGGSASQEFMVTADAGEDLILSSAD 229 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/175 (36%), Positives = 98/175 (56%), Gaps = 1/175 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P + ++RGIEVGHIF G KYS + ATF G D + MG YGIG R+ A +E Sbjct: 428 PSQRLEASRGIEVGHIFQLGRKYSQALEATFTNEQGLDEPLWMGCYGIGVSRLAQAAVEQ 487 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD +GI WP ++APF++ ++ A D V E+++ L + G +V DD E+ G + Sbjct: 488 HHDQQGICWPVAIAPFEVIVLVASAQDPVQVALGEQLHDELEQAGLEVLLDDRSERAGVK 547 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 F ADL+G P +V+VG + + ++VE+ R G + D++ V+ + R Sbjct: 548 FKDADLIGIPWRVVVG-RGAASAQVELVERAGGAKRDVAAGAVVALLQDHIAAAR 601 >gi|148238958|ref|YP_001224345.1| prolyl-tRNA synthetase [Synechococcus sp. WH 7803] gi|166980165|sp|A5GJD3|SYP_SYNPW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|147847497|emb|CAK23048.1| Prolyl-tRNA synthetase [Synechococcus sp. WH 7803] Length = 594 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 111/231 (48%), Positives = 151/231 (65%), Gaps = 3/231 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEI SH+L++R G I + GIY++LP+ K L +NAI+R E Sbjct: 1 MRVSRLMLVTLRDVPADAEIPSHQLLVRGGYIRRIGSGIYAYLPMMWKVLRKINAIVRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA+E +P LQ ADLW SGR+ Y + M L DR ++ + GPTHEEV+T++ Sbjct: 61 LNHLGALETLLPQLQPADLWERSGRWQGYTEGEGIMFHLEDRQNRQLGLGPTHEEVITEL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E +++Y M Sbjct: 121 AGDLLRSYRQLPVTLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHANQEDLENTYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 +Y RIF R GL+++ + A+SG IGG S E++V A GE + S D + Sbjct: 181 ATAYARIFERCGLEAVAVDADSGAIGGAASQEYMVTAAAGEDLILTSSDGL 231 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 88/176 (50%), Gaps = 5/176 (2%) Query: 252 WTA-PYAATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 W A P +D+ + D P RGIEVGHIF G KYS + A F + G Sbjct: 397 WDAMPAQIKADLRTARAGDQCVHDPSQTLSECRGIEVGHIFQLGRKYSEALDARFTNSAG 456 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + + MG YGIG R+ A +E HD GI WP +APF++ ++ K D E+ Sbjct: 457 QQEALLMGCYGIGISRLAQAAVEQHHDEAGISWPLGIAPFQVIVVIAKIQDPTQVALAEE 516 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +Y G D DD E+ G +F ADL+G P +++VG + + KVE+ R T Sbjct: 517 LYQSFLDAGIDALLDDRDERAGVKFKDADLIGIPWRIVVG-RDAGEGKVEVVERST 571 >gi|158335473|ref|YP_001516645.1| prolyl-tRNA synthetase [Acaryochloris marina MBIC11017] gi|189083486|sp|B0C230|SYP_ACAM1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|158305714|gb|ABW27331.1| prolyl-tRNA synthetase [Acaryochloris marina MBIC11017] Length = 600 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 114/229 (49%), Positives = 148/229 (64%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRVGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + GA E +P +Q A+LW ESGR+D+Y + M L DR D+ + GPTHEEV+T + Sbjct: 61 MDAAGAQECLLPQIQPAELWQESGRWDTYTQAEGIMFALQDRQDRELGLGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF K Y+KM Sbjct: 121 ARDMIRSYRQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFSTDEADLKIIYSKM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y I R GL + A+SG IGG S EF+VLA+ GE +V + D Sbjct: 181 HDAYCNILQRSGLAYRAVDADSGAIGGSGSQEFMVLAEAGEDEVLYTDD 229 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 67/179 (37%), Positives = 106/179 (59%), Gaps = 7/179 (3%) Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 T+ V + + D P+ +ARGIE+GHIF GTKYS + AT+ GK+ + MG YG Sbjct: 414 TAQVGDRAVHD--PKQTLQTARGIEIGHIFQLGTKYSQALGATYTNEAGKEQPLVMGCYG 471 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVG 376 +G R+ A +E S+D GI+WP ++AP+ +I N K DQV +A EK+Y+ L+ G Sbjct: 472 VGVSRLAQAAVEQSYDKDGIVWPVAIAPYHAIIIIPNGKDSDQV--EAAEKLYSELNAAG 529 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + DD E+ G +F ADL+G P +++ G + + + VE+ R T ++L++V+ Sbjct: 530 IETLLDDRTERAGVKFKDADLIGIPYRIVTG-RSLKEGNVEMVERATHDAHQIALDQVL 587 >gi|319956647|ref|YP_004167910.1| prolyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] gi|319419051|gb|ADV46161.1| prolyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] Length = 571 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 109/225 (48%), Positives = 148/225 (65%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK +P +E P DA + SH +LR G I G+Y++LPLG+++LD V +++EE Sbjct: 1 MRFSKLLIPTAKEAPSDAVLPSHIYLLRAGFIQSVGAGLYNFLPLGKRSLDRVRQVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ + + A+LW ESGR++ YGKE+LR DR + + GPTHEE+M ++ R Sbjct: 61 LDAAGCQEVDLAFVTPAELWRESGRFEKYGKELLRFTDRKENEFVLGPTHEEMMVNLVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQI+ KFRDE+RPRFG+MR REFLM+D YSF E K ++ M + Sbjct: 121 SVKSYKQLPLHLYQIKTKFRDEIRPRFGLMRGREFLMEDGYSFHKDEEDMKREFDHMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 Y RIF RLGL + A+SG IGG S EF+VLAD+GE T V C Sbjct: 181 YSRIFTRLGLDFRVVEADSGAIGGSGSKEFMVLADSGEDTIVVCE 225 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 95/163 (58%), Gaps = 1/163 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVGHIF GT+YS P++ATF +GK MG+YGIG R++AA+IE HD +G Sbjct: 409 TKGIEVGHIFQLGTRYSEPLNATFLDENGKRRPFVMGTYGIGVSRLLAAIIEQHHDDRGC 468 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IW APF + +I + R+A E++Y L G +V DD E+ G + +L+ Sbjct: 469 IWTRESAPFDVEIIVSNIANDAEREAAEELYRLLKSKGVEVLLDDRKERFGFKMKDFELI 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 G PL ++VG K ++D +VE+ R R D+ LE V + R Sbjct: 529 GIPLGIVVGKK-LADGQVELIVRDGLERIDLPLERVADEVLER 570 >gi|299139552|ref|ZP_07032726.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] gi|298598480|gb|EFI54644.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] Length = 614 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 111/223 (49%), Positives = 148/223 (66%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+P L+E P DAE+ASHKL+LR G I Q GIYS+LPLGQ++L+ + AI+REE Sbjct: 3 RWSKLFIPTLREAPTDAEVASHKLLLRAGYIRQLGAGIYSYLPLGQRSLNKIIAIVREEM 62 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N+ G E +P L +LW ESGR+ G+ + L DR + THEEVMT I R+ Sbjct: 63 NKIGQ-EFLLPALNPRELWEESGRWTGMGQNLFHLQDRKGAELCLAMTHEEVMTSIARNE 121 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SY+ LP +YQIQ KFRDE RP+ G++R R+F MKDAYSFD+ G SY K + +Y Sbjct: 122 LRSYKQLPQIWYQIQTKFRDEPRPKAGLLRVRQFTMKDAYSFDVDQAGLDESYRKHYDTY 181 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 +RIF R GL+ + + A+SG +GG S EF+V D GE + S Sbjct: 182 VRIFKRCGLEFVAVDADSGAMGGSGSQEFMVYTDAGEDLIASS 224 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 93/164 (56%), Gaps = 8/164 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS---HDG 335 + +E+GHIF GTKYS M A A+GK+ MG YGIG R++ A IESS + G Sbjct: 444 GKAVEIGHIFKLGTKYSESMGARVLDANGKEVLPIMGCYGIGIERILTAAIESSAAANAG 503 Query: 336 KGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 + P ++APF +++ N++ D + A EKI A L G DV DD E+ G +F Sbjct: 504 EQYALPAAIAPFAVVVTITNVREADLLA--AGEKIAADLEAAGVDVLLDDRDERAGVKFK 561 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 A+L+G P ++ +G K ++ +VE+ RLT D+ L+ + + Sbjct: 562 DAELIGVPYRINIGKKL-AEGQVELVDRLTQTTTDLPLDAITAH 604 >gi|161344762|ref|NP_441328.2| prolyl-tRNA synthetase [Synechocystis sp. PCC 6803] gi|114152887|sp|P73942|SYP_SYNY3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 603 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 113/229 (49%), Positives = 151/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL++R G I + G+Y++LPL + L+ V I++EE Sbjct: 1 MRLSQMLFVTLRDDPADAEIPSHKLLVRAGFIRRLGSGLYAYLPLIWRVLEKVKRIVQEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 NRTGA E +P LQ ++LW SGR+D+Y + M L DR ++ + GPTHEEV+T I Sbjct: 61 MNRTGAQECLLPQLQPSELWKMSGRWDTYTESEGIMFALRDRLERELGLGPTHEEVITAI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF K +Y M Sbjct: 121 AKEMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSDEASLKATYGAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y IF R GL P+ A+SG IGG S EF+VLAD GE ++ ++D Sbjct: 181 DQAYRNIFSRCGLDFRPVDADSGAIGGSGSQEFMVLADAGEDEILYTED 229 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 17/235 (7%) Query: 206 LSHEFIVLADTGE---TQVFCSKDFMDFPIPSEN--TDFDDIISLNSIVEQWTAPYAATS 260 ++ +F+ L D T D +D+ + N TDF +L +V A Sbjct: 367 VADKFLRLVDQTAVDLTNFATGADAVDYHVTGANWSTDF----TLPKLVVDVRKALAGDR 422 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 VH+ P + +ARGIEVGHIF GTKYS M ATF G++ + MG YGIG Sbjct: 423 PVHD-------PTGELKTARGIEVGHIFQLGTKYSQAMGATFTNEQGEEKPLVMGCYGIG 475 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 R+ A +E S+D GIIWP ++AP+++ ++ D+ E+IY DV Sbjct: 476 VSRLAQAAVEQSYDKDGIIWPTAIAPYEVVIVVPNVGDEEQMQVAEQIYTEFQAAEVDVL 535 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E+ G +F ++L+G P +V+ G K + ++E+ R +++++ V+ Sbjct: 536 LDDRNERAGVKFKDSELIGIPYRVVTG-KSLKQGQLEVVKRADKSVQNLAIAAVV 589 >gi|119484696|ref|ZP_01619178.1| prolyl-tRNA synthetase [Lyngbya sp. PCC 8106] gi|119457514|gb|EAW38638.1| prolyl-tRNA synthetase [Lyngbya sp. PCC 8106] Length = 604 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 114/229 (49%), Positives = 150/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK L+E+P +AEI SHKL++R G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSKMLFVTLREDPAEAEIPSHKLLVRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P +Q A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNATGAEECLLPQVQPAELWQESGRWDTYTKAEGIMFALRDRRNRDLALGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + E K +Y M Sbjct: 121 AKEMIRSYQQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHIDEESLKATYKDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y I R GL + A+SG IGG S EF+VLA+ GE +V ++D Sbjct: 181 DRAYRNILTRSGLAFRAVEADSGAIGGSGSQEFMVLAEAGEDEVLYTED 229 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/162 (40%), Positives = 100/162 (61%), Gaps = 5/162 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIEVGHIF GTKYS M AT G++ + MG YG+G R+ + +E S+D G Sbjct: 433 TARGIEVGHIFQLGTKYSQMMGATCTNEKGEEIPLVMGCYGVGVSRLAQSAVEQSYDKDG 492 Query: 338 IIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP+ I++ NI Q+ + E +Y +L++VG + DD E+ G +F A Sbjct: 493 IIWPVAIAPYHAIITIPNINDTQQL--ETAENLYTQLNQVGIETLLDDRNERAGVKFKDA 550 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DL+G P +++ G S KVEI R T +++++E+V++Y Sbjct: 551 DLIGIPYRIVTGRSLKS-GKVEIVERATHTSQEVAVEDVVSY 591 >gi|288818560|ref|YP_003432908.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|288787960|dbj|BAI69707.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|308752150|gb|ADO45633.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] Length = 569 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 149/224 (66%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S YF +E P DAE SHK +L+ G I Q + GIY++ P G + L + I+R+E Sbjct: 1 MRWSTYFWYTSKEEPADAEAPSHKYLLKGGFIKQVASGIYAFTPAGYRVLKKIENIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L A+LW E+GR+D YG+E+ L DR+ + GPTHEE +TD+ R+ Sbjct: 61 MDRSGAQELLLTVLNPAELWRETGRWDLYGRELFTLKDRHGRDYCLGPTHEEEITDMVRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LPF YQIQ+KFRDE RPRFG++R REF+MKDAYSFD + SY M + Sbjct: 121 FVNSYRQLPFILYQIQVKFRDEKRPRFGLIRGREFIMKDAYSFDTDEFSALMSYETMKFA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y RIF +L LK++ + A G IGG SHEF++L D GE +V +C Sbjct: 181 YERIFKKLRLKTLMVEASVGAIGGMSSHEFVILTDYGEARVAYC 224 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 100/157 (63%), Gaps = 1/157 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++G+E+GHIF GT+YSLPM A +K G+D + MG YGIG R ++A++E D GI Sbjct: 402 SKGLELGHIFLLGTRYSLPMKAFYKDQQGEDKPIYMGCYGIGISRCMSAIVEQYSDELGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAPF++++I + D + EKIY + ++G DV +DD G +FA ADL Sbjct: 462 KWPTVVAPFELNVICLNPSDAEQKTVAEKIYYQAQEMGLDVIYDDREASAGFKFADADLC 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 GFP +++VG K + KVE++ R TG + D+ +E+ + Sbjct: 522 GFPYRIVVGKK-TKEGKVELQKRHTGEKLDVPIEDAV 557 >gi|289548806|ref|YP_003473794.1| prolyl-tRNA synthetase [Thermocrinis albus DSM 14484] gi|289182423|gb|ADC89667.1| prolyl-tRNA synthetase [Thermocrinis albus DSM 14484] Length = 570 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 152/225 (67%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF +++P D E SHK +++ G I Q + G+Y + P + L + +I+R+E Sbjct: 1 MRWSRYFWYTSKDDPADVEAPSHKYLVKGGFIKQIASGVYQYTPPALRVLRKIESIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +RTGA E+ + L A+LW E+GR+D YG+E+ L DR+ + GPTHEE +TD+FRS Sbjct: 61 MDRTGAQEVLLTVLNPAELWRETGRWDLYGRELFTLKDRHGRDYCLGPTHEEEVTDLFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SYR LP YQIQ+KFRDE RPRFG++R+REF+MKDAYSFDL + SY M + Sbjct: 121 YVTSYRQLPLILYQIQVKFRDEKRPRFGLIRAREFIMKDAYSFDLDEFSAIMSYEAMKFA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCS 224 Y RIF ++ LK++ + A G IGG SHEF+VL D GE +V +C Sbjct: 181 YDRIFKKMRLKTLMVEASVGAIGGKSSHEFVVLTDYGEARVAYCE 225 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 74/157 (47%), Positives = 102/157 (64%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+EVGHIF GT+YS PM A K ++GKD V MG YGIG R ++A++E HD KGI Sbjct: 404 RGLEVGHIFLLGTRYSEPMKAFVKDSEGKDVPVVMGCYGIGISRCMSAIVEQHHDEKGIK 463 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP VAPF++ ++ + D+ R EK+Y ++G +V +DD E GS+FA ADL G Sbjct: 464 WPTPVAPFELDIVCVNISDEEQRAVAEKLYTTAQEMGVEVLYDDRDESPGSKFADADLCG 523 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 FP +++VG K V + KVE++ R TG R D +EE + Sbjct: 524 FPYRIVVGKK-VKEGKVEVQSRHTGERWDAPIEEAVG 559 >gi|1653092|dbj|BAA18008.1| proline-tRNA ligase [Synechocystis sp. PCC 6803] Length = 617 Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 113/229 (49%), Positives = 151/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL++R G I + G+Y++LPL + L+ V I++EE Sbjct: 15 MRLSQMLFVTLRDDPADAEIPSHKLLVRAGFIRRLGSGLYAYLPLIWRVLEKVKRIVQEE 74 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 NRTGA E +P LQ ++LW SGR+D+Y + M L DR ++ + GPTHEEV+T I Sbjct: 75 MNRTGAQECLLPQLQPSELWKMSGRWDTYTESEGIMFALRDRLERELGLGPTHEEVITAI 134 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF K +Y M Sbjct: 135 AKEMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSDEASLKATYGAM 194 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y IF R GL P+ A+SG IGG S EF+VLAD GE ++ ++D Sbjct: 195 DQAYRNIFSRCGLDFRPVDADSGAIGGSGSQEFMVLADAGEDEILYTED 243 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 17/235 (7%) Query: 206 LSHEFIVLADTGE---TQVFCSKDFMDFPIPSEN--TDFDDIISLNSIVEQWTAPYAATS 260 ++ +F+ L D T D +D+ + N TDF +L +V A Sbjct: 381 VADKFLRLVDQTAVDLTNFATGADAVDYHVTGANWSTDF----TLPKLVVDVRKALAGDR 436 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 VH+ P + +ARGIEVGHIF GTKYS M ATF G++ + MG YGIG Sbjct: 437 PVHD-------PTGELKTARGIEVGHIFQLGTKYSQAMGATFTNEQGEEKPLVMGCYGIG 489 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 R+ A +E S+D GIIWP ++AP+++ ++ D+ E+IY DV Sbjct: 490 VSRLAQAAVEQSYDKDGIIWPTAIAPYEVVIVVPNVGDEEQMQVAEQIYTEFQAAEVDVL 549 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E+ G +F ++L+G P +V+ G K + ++E+ R +++++ V+ Sbjct: 550 LDDRNERAGVKFKDSELIGIPYRVVTG-KSLKQGQLEVVKRADKSVQNLAIAAVV 603 >gi|149179156|ref|ZP_01857725.1| prolyl-tRNA synthetase [Planctomyces maris DSM 8797] gi|148842016|gb|EDL56410.1| prolyl-tRNA synthetase [Planctomyces maris DSM 8797] Length = 584 Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 112/227 (49%), Positives = 152/227 (66%), Gaps = 4/227 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +P ++E P DAEI SH+LMLR G+I Q G Y++LPLG KA+ I+REE Sbjct: 1 MRWSNTLIPTIKEVPADAEIPSHQLMLRAGLIRQLMAGAYTYLPLGWKAIQKAAQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDK--AMIYGPTHEEVMTDI 117 + GA E+ +P LQ L+ + R +++G +++ R ++ M GPTHEEV+TD+ Sbjct: 61 MDAAGAAELHMPALQPIGLFERTQRKEAFGSVLIQFNVPRGNRQIPMALGPTHEEVVTDL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 I SY+ LP T YQIQ KFR+E RPRFGV+R+ EFLMKDAYSF + + Y++M Sbjct: 121 ISHCISSYKQLPLTVYQIQTKFRNEERPRFGVLRTSEFLMKDAYSFSSSVKQLDEIYDRM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 + +Y RIF R GLK +P+ AESGPIGGD SHEF++ AD GE + V+C Sbjct: 181 YRAYCRIFARCGLKYLPVEAESGPIGGDASHEFMIPADNGEDSIVYC 227 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 101/193 (52%), Gaps = 12/193 (6%) Query: 259 TSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T D+ N + D P++ GIEVGH+F GTKY+ + A F K H + MG Sbjct: 384 TFDLRNAEAGDPCPKSGEPLTIVHGIEVGHVFKLGTKYTEALDANFLDEKEKRHPIIMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+VA + E+ HD G+IWP S+AP+++ +I + D E+ Y L G Sbjct: 444 YGIGVNRIVAGLAETRHDENGLIWPLSIAPYEVLVIPLNVKDDEVMQTAERYYNELKAAG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV +DD + G +F ADL+G P +V++G K + ++E K R E ++L+ I Sbjct: 504 VDVLFDDRNARPGVKFKDADLIGIPYRVVIGGKGLQKGEIETKWRTAENAEMIALDAGI- 562 Query: 437 YASHRFSNNRPVL 449 RPVL Sbjct: 563 ---------RPVL 566 >gi|32267225|ref|NP_861257.1| prolyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] gi|81835913|sp|Q7VFF0|SYP_HELHP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|32263278|gb|AAP78323.1| prolyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] Length = 588 Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 109/225 (48%), Positives = 150/225 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+ L+E+P+DA + SH+ ++R G I Q GIY++LPLG+K LD V I++EE Sbjct: 1 MRFSQLFVNTLKESPKDAVLKSHQYLIRGGFIQQIGSGIYNFLPLGKKLLDKVRFIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ + + A+LW ESGRY+ YG+E+LR DR + + GPTHEEV+T I ++ Sbjct: 61 MDKSGAQEILMGFVTPAELWRESGRYEQYGRELLRFVDRKENEFVLGPTHEEVITHIAKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDELRPRFG+MR REF+MKD YSF ++ M + Sbjct: 121 TIKSYKQLPLHLYQIHSKFRDELRPRFGLMRGREFIMKDGYSFHSNYADLNREFDVMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RI R+GL+ + A+SG IGG S EF+VLA GE + K Sbjct: 181 YKRILQRMGLEFKVVEADSGAIGGSGSKEFMVLAPCGEDTIVVCK 225 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 96/185 (51%), Gaps = 10/185 (5%) Query: 260 SDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P+ + +GIEVGHIF G KYS M+A F DGK + MG Y Sbjct: 401 ADIAQSKEGDLCPKCAQELYYTKGIEVGHIFKLGDKYSRAMNAQFLDNDGKTQPLIMGCY 460 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G G R++ A++E D G IW V+ F I++I D V D +Y LS G Sbjct: 461 GFGISRILPAILEQKSDDLGCIWSKEVSVFDIAIIISNTKDSVQNDFGSALYEILSACGI 520 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI-------KHRLTGIREDMS 430 DV D+ E+ G + +LLGF +IVG K +++ KVE+ K+ L +++ Sbjct: 521 DVLLDERDERFGVKMKDFELLGFHSALIVG-KGLNEGKVELIKREGLKKYELCATDKEIL 579 Query: 431 LEEVI 435 LEE++ Sbjct: 580 LEEIL 584 >gi|318041155|ref|ZP_07973111.1| prolyl-tRNA synthetase [Synechococcus sp. CB0101] Length = 609 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 112/229 (48%), Positives = 147/229 (64%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L+++P +AEI SHKL+LR G I + GIY++LPL + L ++AI+REE Sbjct: 1 MRVSRLMLVTLRDDPAEAEIPSHKLLLRAGYIRRVGSGIYAYLPLLWRVLQKISAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA+E +P LQ A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 LNAAGALETLLPQLQPAELWQRSGRWAGYTAGEGIMFHLEDRQGRELGLGPTHEEVITAL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF K +Y M Sbjct: 121 AGDLLRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEACLKQTYAAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y RIF R GL+++ + A+SG IGG S EF+V AD GE + S D Sbjct: 181 DQAYRRIFSRCGLRAVAVEADSGAIGGSASQEFMVTADAGEDLILASGD 229 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 96/169 (56%), Gaps = 1/169 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 ++RGIEVGHIF G KYS + ATF G++ + MG YGIG R+ A +E HD G Sbjct: 436 ASRGIEVGHIFQLGRKYSAALEATFTNEAGQEEPLWMGCYGIGVSRLAQAAVEQHHDANG 495 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I WP ++APF++ ++ D R+ E++YA G DV DD E+ G +F ADL Sbjct: 496 ICWPTAIAPFEVIVVIANVADAAQRELGEQLYAEFQVAGMDVLLDDRTERAGVKFKDADL 555 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 LG P +V+VG + +D KVE+ R G R D++ +V+ + R Sbjct: 556 LGIPWRVVVG-RGAADGKVELVQRAGGERSDLAAADVLAQLQGQLERER 603 >gi|283955965|ref|ZP_06373455.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] gi|283792625|gb|EFC31404.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] Length = 568 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 114/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDYAANVEAAKRA 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 I + E+ A YA+ N K DSL + +++A Sbjct: 240 KKICQD---ERPEANYASKFHTPNIKTIDSLAQFFKINA 275 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 94/161 (58%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE+SHD Sbjct: 401 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEASHD 460 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 461 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP +++G K + ++++E R ++E + +E++ Sbjct: 521 FELMGFPYALVIG-KGLENNEIEFIQREGLVKELIKTDELM 560 >gi|256545377|ref|ZP_05472740.1| proline--tRNA ligase [Anaerococcus vaginalis ATCC 51170] gi|256398938|gb|EEU12552.1| proline--tRNA ligase [Anaerococcus vaginalis ATCC 51170] Length = 565 Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 100/219 (45%), Positives = 152/219 (69%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +P L+++P+DAE SHKL++R I + S G+YS+LPLG K ++ + I+R+ + +I Sbjct: 1 MPTLRDDPQDAETQSHKLLVRGAFIRKTSSGVYSYLPLGMKVINKIENIVRKSMEKYDSI 60 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E+S LQS D+W +SGR+ ++G EM ++ DR+D+ GPT EE T++ + + SY+ Sbjct: 61 EVSTSVLQSKDIWEKSGRWQNFGPEMFKIKDRHDREFCLGPTAEEQFTNLIKDELNSYKQ 120 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP YQI KFRDE RPRFG+ RSR+F+MKDAYSFD+ EG K SY KM+ +Y+ +F Sbjct: 121 LPLNLYQIVSKFRDEKRPRFGINRSRDFIMKDAYSFDVDMEGLKKSYQKMWDAYVEVFDA 180 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 L L + +SG +GG++SHEF+ LA+TGE ++F +++ Sbjct: 181 LDLDYKIVEGDSGAMGGNISHEFMALAETGEGEIFYTEN 219 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/145 (45%), Positives = 86/145 (59%), Gaps = 5/145 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVG+IF GTKYS + A F +GK MGSYGIG R ++A+IE +D GI Sbjct: 397 ARGIEVGNIFQLGTKYSESLEAYFLDENGKQKPFIMGSYGIGITRSISAIIEQHYDENGI 456 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP VAPF+ I+L+N +Q ++ EKIY +L G +V DD E+ G +F D Sbjct: 457 IWPTKVAPFEAWITLVNKNNEEQ--KEIAEKIYNKLLDAGIEVMLDDRKERAGVKFNDRD 514 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L+G P ++ VG K D VE R Sbjct: 515 LVGVPYRITVG-KDAKDDMVEFSKR 538 >gi|227499759|ref|ZP_03929859.1| proline--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227218145|gb|EEI83411.1| proline--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 572 Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 107/239 (44%), Positives = 155/239 (64%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SKY++P L+++P DAE SHK + R G I + + G+YS+LPLG+K ++ + AI+RE Sbjct: 1 MKLSKYYMPTLRQDPVDAETESHKFLTRGGFIRKQASGVYSFLPLGKKVVNKIEAIVREA 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+S LQ+ ++W SGR++++G EM ++ DR+D+ GPT EE T + + Sbjct: 61 MEDYDSIEVSTSILQTREIWEASGRWETFGPEMFKIKDRHDREYCLGPTAEESFTSLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG+ RSR+FLMKDAYSFD EG + SY KM+ + Sbjct: 121 ELNSYKQLPLNIYQIVDKFRDEKRPRFGINRSRDFLMKDAYSFDKDMEGLEVSYQKMWDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y + F R+GL + +SG +GG SHEFI L++TGE + + D D+ E F Sbjct: 181 YEQAFDRMGLDYKIVEGDSGSMGGKKSHEFIALSETGEGVILYTDD-SDYAATDEKARF 238 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 70/145 (48%), Positives = 90/145 (62%), Gaps = 5/145 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVG+IF GTKYS + A F +GK MGSYGIG R V+A++E HD KGI Sbjct: 403 ARGIEVGNIFQLGTKYSDSLGAYFLDENGKQQAFIMGSYGIGITRSVSAIVEQYHDDKGI 462 Query: 339 IWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP SVAPF+ ++++NI +Q ++ EKIY RL + DV DD E+ G +F D Sbjct: 463 IWPTSVAPFEAIVTIVNINNEEQ--KELGEKIYKRLKEERIDVLLDDRKERAGVKFNDRD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L+G P ++ VG K SD VE R Sbjct: 521 LIGIPYRITVG-KDASDDIVEYSTR 544 >gi|187607298|ref|NP_001120088.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Xenopus (Silurana) tropicalis] gi|165971208|gb|AAI58530.1| LOC100145097 protein [Xenopus (Silurana) tropicalis] Length = 466 Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 141/435 (32%), Positives = 222/435 (51%), Gaps = 35/435 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + P + S KLM++ G+I S G + +LP +A++ + +I +E G ++ + Sbjct: 51 EAKPNEPTSKSQKLMIKAGLIRPSSPGCFHYLPFTVRAMEKLIRLIDKEMQDIGGQKIDM 110 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPF 130 PTL SA LW +SGR+D GKE+ RL DR+++ GPTHEE +T + S + + LP Sbjct: 111 PTLSSAALWRQSGRWDLMGKELFRLMDRHNQEYCLGPTHEEAVTHLVASEGGINNKELPL 170 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 YQI KFRDE RP FG++R REF MKD Y+FD++ E + +Y + +Y IF LG+ Sbjct: 171 LLYQITRKFRDEQRPCFGLLRGREFYMKDMYTFDISDESAYETYRNVCDAYTNIFRALGV 230 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + ++A++G IGG +SHEF + A+ GE ++ + DF + L Sbjct: 231 RFVKVQADTGNIGGKMSHEFHLPANIGEDRLLVCG----------SCDFSANVELLQ--- 277 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 HNEK + + +GIE+GH FY GTKYS AT + Sbjct: 278 ------------HNEKNC-PVCTGQLKETKGIEIGHTFYLGTKYSHVFKATCYDSQKTPF 324 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ------VCRDA 364 +MG YGIG R++AA +E I WP +AP+++ LI+ K + + Sbjct: 325 IAEMGCYGIGVSRLLAASLEVLSKEDDIHWPGLIAPYQVCLISPKKGSKESEAITISETL 384 Query: 365 CEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFV-SDSKVEIKHRL 422 ++I + + + DD IG + A + G+P ++VG K + + S E++ Sbjct: 385 YDEIIQSVPWLRDETVLDDRSYLTIGKRVKEAHMTGYPYIIVVGKKALETPSLFEVRSHN 444 Query: 423 TGIREDMSLEEVINY 437 T S E VI++ Sbjct: 445 TDEVHFFSREGVIDF 459 >gi|254413846|ref|ZP_05027615.1| prolyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] gi|196179443|gb|EDX74438.1| prolyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] Length = 596 Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 112/223 (50%), Positives = 148/223 (66%), Gaps = 3/223 (1%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E+P +AEI SHKL++R G I + GIY++LPL + L V+ I+REE N TGA Sbjct: 2 LLVTLREDPAEAEIPSHKLLVRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNATGA 61 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E +P LQ +DLW ESGR+D+Y K M L+DR ++ + GPTHEEV+T I R I+ Sbjct: 62 QECLLPQLQPSDLWRESGRWDTYTKAEGIMFALSDRQNRELGLGPTHEEVITTIAREMIR 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + + K +Y M +Y Sbjct: 122 SYRQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHVNEDSLKKTYQDMDQAYRN 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + R GL + A+SG IGG S EF+VLAD GE ++ ++D Sbjct: 182 MISRCGLAFRAVEADSGAIGGSGSQEFMVLADIGEDEILYTED 224 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 98/161 (60%), Gaps = 5/161 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE GHIF GTKYS M AT+ G+++ + MG YG+G R+ A +E S+D G Sbjct: 428 SARGIEAGHIFQLGTKYSKAMGATYTNEAGEENPLYMGCYGVGVSRLAQAAVEQSYDKDG 487 Query: 338 IIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIW ++AP+ I++ NI Q+ +A E +Y +L + G + DD E+ G +F A Sbjct: 488 IIWAPAIAPYHAIITVPNISDTKQM--EAAETLYQQLWQAGVETLLDDRNERAGVKFKDA 545 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DL+G P +++ G + + KVE+ R T +++ L++V++ Sbjct: 546 DLIGIPYRIVTG-RSLKQGKVEVAVRATHQSQELPLDQVVS 585 >gi|317969639|ref|ZP_07971029.1| prolyl-tRNA synthetase [Synechococcus sp. CB0205] Length = 633 Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 109/229 (47%), Positives = 150/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L+++P +AEIASHKL+LR G I + GIY++LPL + L V+A++REE Sbjct: 26 MRVSRLMLVTLRDDPAEAEIASHKLLLRAGYIRRIGSGIYAYLPLLWRVLQKVSAVVREE 85 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA+E +P LQ ++LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 86 LNAAGALETLLPQLQPSELWQRSGRWAGYTDGEGIMFHLEDRQGRELGLGPTHEEVITAL 145 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSF + K +Y M Sbjct: 146 AADLLRSYRQLPVNLYQVQTKFRDEIRPRFGLMRGREFIMKDAYSFHANEDCLKQTYGLM 205 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y RIF R GL+++ + A+SG IGG S EF+V A++GE + + D Sbjct: 206 DQAYRRIFQRCGLRAVAVEADSGAIGGSASQEFMVTAESGEDLILAAGD 254 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 101/165 (61%), Gaps = 5/165 (3%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P ++RGIEVGHIF G KYS + ATF G++ + MG YGIG R+ A +E Sbjct: 451 PSQTLEASRGIEVGHIFQLGRKYSTALDATFTNESGQEEPLWMGCYGIGVSRLAQAAVEQ 510 Query: 332 SHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 HD GI WP ++AP+++ ++ N+KA +QV D E +Y +L G DV DD E+ G Sbjct: 511 HHDANGICWPTAIAPYEVIVVIANVKATEQV--DLAEGLYDQLQAAGVDVLLDDRSERAG 568 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +F +LLG P +V+VG + ++ +VE+ R TG ++D++ +++ Sbjct: 569 VKFKDTELLGIPWRVVVG-RGAAEGQVELVQRSTGAKQDLAADQL 612 >gi|227544954|ref|ZP_03975003.1| prolyl-tRNA synthetase [Lactobacillus reuteri CF48-3A] gi|300910015|ref|ZP_07127475.1| proline--tRNA ligase [Lactobacillus reuteri SD2112] gi|227185065|gb|EEI65136.1| prolyl-tRNA synthetase [Lactobacillus reuteri CF48-3A] gi|300892663|gb|EFK86023.1| proline--tRNA ligase [Lactobacillus reuteri SD2112] Length = 577 Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 115/269 (42%), Positives = 159/269 (59%), Gaps = 2/269 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +E P DAE SHK+M+R G I+Q S G++S+LPL + + V IIR+E Sbjct: 1 MKQSKVLIPTKKEAPSDAEALSHKMMIRAGYIYQVSAGVWSYLPLAYRVIRKVENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM +P L ADLW ESGRY+SYG + +L DR D+ I GPTHEE T++ R Sbjct: 61 MDKAGAVEMLMPGLLPADLWKESGRYESYGDNLFKLKDRRDRDFILGPTHEETFTEVLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE RPR+G++R +EF M D YSF EG +YN + Sbjct: 121 SIKSYKKLPLVVYQLQDKFRDEDRPRYGILRGKEFEMLDGYSFSADQEGLDEAYNNQAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL + A+SG +GG S EF A+ GE + + I + F Sbjct: 181 YRNIFDRIGLNYKVILADSGTMGGKNSQEFSAPAEVGEDIIAYTDGDYAANIEKAESKFT 240 Query: 241 DI--ISLNSIVEQWTAPYAATSDVHNEKL 267 + + + +E+ P A T D E L Sbjct: 241 GVQQTAAPAPIEKKATPGAHTVDEAAESL 269 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/179 (40%), Positives = 107/179 (59%), Gaps = 6/179 (3%) Query: 261 DVHNEKLFDSLPENKRVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D N K + P+ K + GIE+GHIF GT YS + A ++G+ V MGSYGI Sbjct: 387 DFRNVKEGEIAPDGKPLKFTPGIEIGHIFKLGTHYSSKLGAQVLDSNGRLTDVIMGSYGI 446 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGC 377 G R+++AV E + D G++WP+S+APF + +I N K DQ+ +KI +L++ G Sbjct: 447 GVTRLLSAVAEQNADENGLVWPNSIAPFDVHVIPVNAKKEDQMA--MADKIDQQLTEAGY 504 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +FA +DL+G P++V VG K D VEIK R TG ++ EE++N Sbjct: 505 EVLVDDRKERAGVKFADSDLIGIPIRVTVGKK-AQDGIVEIKIRKTGETVEVKQEELVN 562 >gi|254432589|ref|ZP_05046292.1| prolyl-tRNA synthetase [Cyanobium sp. PCC 7001] gi|197627042|gb|EDY39601.1| prolyl-tRNA synthetase [Cyanobium sp. PCC 7001] Length = 615 Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 113/229 (49%), Positives = 149/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L+++P +AEI SHKL+LR G + + GIY++LPL + L V+AI+REE Sbjct: 1 MRVSRLMLVTLRDDPAEAEIPSHKLLLRAGYMRRIGSGIYAYLPLLWRVLRKVSAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + GA+E +P +Q A+LW SGR+ Y M L DR +AM GPTHEEV+T + Sbjct: 61 LDAIGALETLLPQMQPAELWQRSGRWSGYTDGEGIMFHLEDRQGRAMGLGPTHEEVVTAL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y M Sbjct: 121 AADLLRSYRQLPVTLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEASLRRTYAAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y RIF R GL+++ + A+SG IGG S EF+V AD GE V S D Sbjct: 181 DRAYARIFRRCGLRALAVEADSGAIGGSASQEFMVTADAGEDLVLSSAD 229 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 95/165 (57%), Gaps = 1/165 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P+ S+RGIEVGHIF G KYS M A+F G++ + MG YGIG R+ A +E Sbjct: 430 PDQCLQSSRGIEVGHIFQLGRKYSSAMEASFTNEAGEEEPLWMGCYGIGVSRLAQAAVEQ 489 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD +GI WP +APF++ ++ D E+IYA L + G D DD E+ G + Sbjct: 490 HHDDQGIRWPTPIAPFEVIVVVANGADATQAALGEQIYATLQQAGVDTLLDDRSERAGVK 549 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 F ADL+G P +V+VG + D +VE+ R G+R D++ E ++ Sbjct: 550 FKDADLIGIPWRVVVG-RGAPDGQVELVRRADGVRVDLAAEALLE 593 >gi|156548890|ref|XP_001606543.1| PREDICTED: similar to ENSANGP00000011343 [Nasonia vitripennis] Length = 430 Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 140/452 (30%), Positives = 229/452 (50%), Gaps = 48/452 (10%) Query: 2 RRSKYFLPIL----QENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAI 56 R SK F P + P+ D S++LM+ G+I + G+Y++LPLG ++L + + Sbjct: 6 RVSKLFQPSIVIPKSSLPKIDLTSKSYQLMINAGIISNVATGMYAFLPLGLRSLQKLINL 65 Query: 57 IREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTD 116 I +E GA ++ +P L +LW ++ R E+ L DR+ K + PT+EE +++ Sbjct: 66 IDQEMTAIGAQKILLPVLTQTNLWQQTARLKQAQSELFMLNDRHGKEFLLSPTYEESISN 125 Query: 117 IFRSHIKSY--RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 + S + + LP YQ K+RDE++PR G++RSREF+MKD Y+FDL + +K +Y Sbjct: 126 MI-SQVGPLQRKQLPLRLYQTSSKWRDEIKPRLGLLRSREFIMKDLYTFDLDADSAKCTY 184 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 ++ +Y +IF R+G+ + A++G IGG +SHE+ ++D GE + K Sbjct: 185 EEVSDAYKKIFERIGIPYKKVIADTGIIGGSISHEYHYVSDIGEDVILSCK--------- 235 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 S V++ P E +S IEVGH F GTKY Sbjct: 236 ---------SCKYEVDKVDEPKTRCPKC----------EEPLISTNSIEVGHTFLLGTKY 276 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 S P+ ATF ++ K +++MG YG+G R++A IE I WP +AP I +I Sbjct: 277 SKPLKATFVDSNCKKQFLEMGCYGLGLTRILATAIEILSTNLEIRWPLELAPHSICVIPP 336 Query: 355 K------AHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVG 407 K A Q+ D +Y+ + DV +DD + IG +F A G+P+ +I+G Sbjct: 337 KKGSKEEAKAQLAYD----VYSTIQNCNLDVIFDDRVDMTIGKRFIDARKTGYPVVIIIG 392 Query: 408 SKFVSDSK-VEIKHRLTGIREDMSLEEVINYA 438 ++D VE+ + +++LE V+ + Sbjct: 393 KSCLADKPLVEVHNVYKASHVNLALENVVEHV 424 >gi|15616855|ref|NP_240068.1| prolyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11134948|sp|P57333|SYP_BUCAI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|25293219|pir||B84958 proline-tRNA ligase (EC 6.1.1.15) [imported] - Buchnera sp. (strain APS) gi|10038919|dbj|BAB12954.1| prolyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 572 Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 104/226 (46%), Positives = 148/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M S+Y L ++ P DA+I SH+LM+R+GMI + S G+Y WLP G + L + II E Sbjct: 1 MLTSQYLLSTSKDIPYDAKIISHQLMIRSGMIRKTSSGLYVWLPTGMRVLKKIKNIITTE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+E+ +P +Q LW ES R + YG+E+LR DR I GPT+EEV+T+ S Sbjct: 61 MEKINALEILMPIIQPEYLWKESRRLNLYGEELLRFLDRRKNQFILGPTNEEVVTNFIGS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQIQ KFRDE+RPRFG++R+REF MKDAYSF + +++YNK + S Sbjct: 121 EIHSYKQLPLTVYQIQTKFRDEIRPRFGIIRTREFTMKDAYSFHINQSCLENTYNKFYDS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y+ IF ++ L ++A+SG +GG++SHEF + GE ++ S D Sbjct: 181 YINIFKKMNLNFCAVKADSGSMGGNISHEFQAFSQNGEDEIVFSND 226 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 93/165 (56%), Gaps = 3/165 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + IE+GHIF G KYS + + K +G + MG YGIG R+ AAVIE HD GII Sbjct: 407 QSIEIGHIFQLGQKYSRKIQQSVKIKNGNLKNLYMGCYGIGITRIAAAVIEQHHDKNGII 466 Query: 340 WPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WPDS+APF++ + IN+K +++ + +Y + K G DV DD E+ G F DL Sbjct: 467 WPDSIAPFEVVILPINMKKDNKI-KIIAHFLYKKFKKTGIDVILDDRDERPGVMFNEVDL 525 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +G P Q+I+ + ++ VE + R ++++++ N+ + Sbjct: 526 IGIPHQIIISKRSINYDNVEYRERKNKENILINIKDIKNFIIQKL 570 >gi|307747462|gb|ADN90732.1| Prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1] gi|315931738|gb|EFV10693.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327] Length = 568 Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 114/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G I Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFIEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 237 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 275 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 95/161 (59%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE+SHD Sbjct: 401 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEASHD 460 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 461 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP +++G K + ++++E+ R ++E + +E++ Sbjct: 521 FELMGFPYALVIG-KGLENNEIELIQREGLVKELIKTDELM 560 >gi|159903050|ref|YP_001550394.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] gi|226701318|sp|A9BED0|SYP_PROM4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|159888226|gb|ABX08440.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] Length = 600 Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 110/229 (48%), Positives = 148/229 (64%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEI SH+L++R G I + + GIY++LPL + + +N IIREE Sbjct: 1 MRVSRLMLVTLRDAPADAEIISHQLLIRGGFIKRITSGIYAYLPLMWRVIQKINCIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N G +E +P L +DLW ++GR++ Y M L DR + + GPTHEE++T I Sbjct: 61 LNAKGCLEALLPQLHPSDLWKKTGRWEGYTAGEGIMFNLKDRQGRELGLGPTHEEIITQI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + SY+ LP YQIQ KFRDE+RPRFG+MRSREF+MKDAYSF E K SY M Sbjct: 121 AGESLHSYKQLPVNLYQIQTKFRDEIRPRFGLMRSREFIMKDAYSFHANEEDLKTSYASM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y +IF R G+K++ + A+SG IGG S EF+V AD GE + SKD Sbjct: 181 DDAYRKIFERCGIKTVAVEADSGAIGGAASQEFMVTADAGEDLILISKD 229 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/172 (39%), Positives = 95/172 (55%), Gaps = 5/172 (2%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + RGIEVGHIF G KYS + A F G MG YGIG R+ A +E SHD Sbjct: 427 IEKRGIEVGHIFQLGRKYSSSLEANFTNEKGSSEPFWMGCYGIGVSRIAQAAVEQSHDQS 486 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 GIIWP S++PF++ ++ D+V E IY +L G DV DD E+ G +F AD Sbjct: 487 GIIWPLSISPFEVIIVIANIKDEVQNRLGEDIYKQLRHKGIDVLLDDRDERAGVKFKDAD 546 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR----LTGIREDMSLEEVINYASHRFSN 444 L+G P +V+VG + S KVE+ R + I ++ ++E+I S + S+ Sbjct: 547 LIGIPWRVVVG-RDSSSGKVELLKRSDRSVKLIESEIVVKELIAEISRKKSS 597 >gi|160902700|ref|YP_001568281.1| prolyl-tRNA synthetase [Petrotoga mobilis SJ95] gi|189083505|sp|A9BGA8|SYP_PETMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160360344|gb|ABX31958.1| prolyl-tRNA synthetase [Petrotoga mobilis SJ95] Length = 582 Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 101/226 (44%), Positives = 152/226 (67%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK + P L+E P D++I S++L++R G I + S G+YS+LPLG K + + I+REE Sbjct: 1 MRFSKLYAPTLKETPSDSDIKSYELLIRGGFIRKISSGVYSYLPLGWKVIRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E+ +P + A+LW +GR++ YG E+++L DR+D+ GPTHEE++T + ++ Sbjct: 61 MEKIGSQEIMLPIIHPAELWKMTGRWEDYGPELMKLKDRHDREFTLGPTHEEIVTFLMKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ P +QI KFRDE+RPRFGV+R+REF+MKDAY+F SY + + Sbjct: 121 ELRSYKQFPVNLFQIATKFRDEIRPRFGVLRAREFIMKDAYTFHTDYNSLHESYQHFYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSK 225 Y I R+GLK + + A++G IGG SHEF VLA GE ++F C K Sbjct: 181 YENIIKRIGLKYVVVEADTGAIGGSFSHEFHVLAQNGEGEIFYCEK 226 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 84/143 (58%), Gaps = 1/143 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIEVG IF G KYS M+A F +G+ MG YG G R + A++E +D GI Sbjct: 406 TRGIEVGQIFELGDKYSSKMNAVFTDENGEQKPYIMGCYGWGVSRTLGAIVEQLNDENGI 465 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAPF++++I + +D+ ++IY K G DV DD G +F DL+ Sbjct: 466 IWPKSVAPFEVAIIPVAMNDEAIVSTSQEIYDYFLKEGIDVIIDDREVSAGFKFKDIDLI 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P+++I+G + + + K+E+K R Sbjct: 526 GVPIKIIIGKR-LKEGKIELKQR 547 >gi|81428868|ref|YP_395868.1| prolyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] gi|114152205|sp|Q38W72|SYP_LACSS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78610510|emb|CAI55561.1| Prolyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] Length = 569 Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 148/224 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P AE SH++MLR G IHQ S G+YS+LPL + L+N+ AII++E Sbjct: 1 MKQSKLFIPTLKEVPNSAEAKSHRMMLRAGYIHQVSAGVYSYLPLAYRVLENIQAIIKDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ A++M +P + A+LW ESGRY +YG + + DR+ + I GPTHEE D+ R+ Sbjct: 61 MSKIDAVQMQMPGILPAELWEESGRYATYGPNLFKFKDRHSRDFILGPTHEETFADLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ LP T YQIQ K+RDE RPR+G++R REF+M+DAYSF ++ +M + Sbjct: 121 NIKSYKKLPLTLYQIQTKYRDEDRPRYGLLRGREFIMQDAYSFSANEADLDTTFQQMRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R GL + ++G +GG S EF +A+ GE + S Sbjct: 181 YTNIFERCGLDFRAIVGDAGAMGGKDSMEFSAIAEIGEDTIVYS 224 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 98/167 (58%), Gaps = 1/167 (0%) Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 E K +GIE+GHIF GT+Y+ ATF +G+ + MGSYGIG R+++A+ E Sbjct: 397 EGKLQFTKGIEIGHIFKLGTRYTEQFGATFLDENGRAKPIIMGSYGIGVSRLLSAITEQQ 456 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D G++WP ++AP+ + ++ + D + E+I L + G V DD E+ G +F Sbjct: 457 ADENGLVWPSAIAPYDLHVVPVNVKDDAQVELAEQIEGLLEEAGYSVLVDDRKERAGVKF 516 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 A +DL+G P+++ VG K ++ VE+K R TG ++ +E+IN S Sbjct: 517 ADSDLIGLPIRITVGKK-AAEEIVEVKLRKTGETLEVKKDELINSLS 562 >gi|148543925|ref|YP_001271295.1| prolyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|184153321|ref|YP_001841662.1| prolyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227364834|ref|ZP_03848881.1| prolyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|325682540|ref|ZP_08162057.1| proline--tRNA ligase [Lactobacillus reuteri MM4-1A] gi|166980132|sp|A5VJD4|SYP_LACRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701303|sp|B2G6V0|SYP_LACRJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148530959|gb|ABQ82958.1| prolyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|183224665|dbj|BAG25182.1| prolyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227070097|gb|EEI08473.1| prolyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|324978379|gb|EGC15329.1| proline--tRNA ligase [Lactobacillus reuteri MM4-1A] Length = 577 Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 106/218 (48%), Positives = 142/218 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +E P DAE SHK+M+R G I+Q S G++S+LPL + + V IIR+E Sbjct: 1 MKQSKVLIPTKKEAPSDAEALSHKMMIRAGYIYQVSAGVWSYLPLAYRVIRKVENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM +P L ADLW ESGRY+SYG + +L DR D+ I GPTHEE T++ R Sbjct: 61 MDKAGAVEMLMPGLLPADLWKESGRYESYGDNLFKLKDRRDRDFILGPTHEETFTEVLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE RPR+G++R +EF M D YSF EG +YN + Sbjct: 121 SIKSYKKLPLVVYQLQDKFRDEDRPRYGILRGKEFEMLDGYSFSADQEGLDEAYNNQAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y IF R+GL + A+SG +GG S EF A+ GE Sbjct: 181 YRNIFDRIGLNYKVILADSGTMGGKNSQEFSAPAEVGE 218 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 5/158 (3%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIE+GHIF GT YS + A ++G+ V MGSYGIG R+++AV E + D G++W Sbjct: 408 GIEIGHIFKLGTHYSSKLGAQVLDSNGRLTDVIMGSYGIGVTRLLSAVAEQNADENGLVW 467 Query: 341 PDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 PDS+APF + +I N K DQ+ +KI +L++ G +V DD E+ G +FA +DL+ Sbjct: 468 PDSIAPFDVHVIPVNAKKEDQMA--MADKIDQQLTEAGYEVLVDDRKERAGVKFADSDLI 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P++V VG K D VEIK R TG ++ EE++N Sbjct: 526 GIPIRVTVGKK-AQDGIVEIKIRKTGETVEVKQEELVN 562 >gi|67922129|ref|ZP_00515644.1| Prolyl-tRNA synthetase, bacterial [Crocosphaera watsonii WH 8501] gi|67856029|gb|EAM51273.1| Prolyl-tRNA synthetase, bacterial [Crocosphaera watsonii WH 8501] Length = 602 Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 111/229 (48%), Positives = 149/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P LQ ++LW ESGR+++Y K M L DR ++ + GPTHEEV+T + Sbjct: 61 MNAAGAQECLLPQLQPSELWKESGRWETYTKAEGIMFSLIDRQERELGLGPTHEEVITTV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF+ + SY M Sbjct: 121 AKDMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFNEDEASLQKSYEAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y I R GL + A+SG IGG S EF++LA+ GE +V ++D Sbjct: 181 DRAYRNIISRCGLAYRAVEADSGAIGGSASQEFMILAEAGEDEVLYTED 229 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/175 (37%), Positives = 100/175 (57%), Gaps = 5/175 (2%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIEVGHIF GTKYS M ATF +G + + MG YG+G R+ A +E Sbjct: 427 PSQILASARGIEVGHIFQLGTKYSQAMGATFTDENGAEKPIVMGCYGVGVSRLAQASVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 S+D GIIWP ++ P+ +I NIK +Q+ + + +Y +L+K+G + DD E+ G Sbjct: 487 SYDKDGIIWPVAITPYHAIIIVPNIKDKNQM--EVAQNLYNQLNKIGVETLLDDRDERAG 544 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +F ADL+G P +V+ G + + KVE+ R T +++ + ++ + N Sbjct: 545 VKFKDADLIGIPYRVVTG-RSLKAGKVEVVTRQTKESQEIEVTNLVETLKNWLKN 598 >gi|315124065|ref|YP_004066069.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017787|gb|ADT65880.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 508 Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 237 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 275 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/108 (40%), Positives = 63/108 (58%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD Sbjct: 401 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHD 460 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 KG IW ++APF + +I D+ + K+Y L+ +G +V + Sbjct: 461 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLE 508 >gi|157363113|ref|YP_001469880.1| prolyl-tRNA synthetase [Thermotoga lettingae TMO] gi|166980167|sp|A8F3T2|SYP_THELT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157313717|gb|ABV32816.1| prolyl-tRNA synthetase [Thermotoga lettingae TMO] Length = 575 Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 151/226 (66%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ + P L+E P DAE+ SH L+ R G I + + G+YS+LPL ++ L + AI+R+E Sbjct: 1 MKFSQLYAPTLKEAPADAEVISHALLYRAGFIRKIAAGVYSYLPLAKRTLSKIEAIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+S+P +Q A+LW +GR+D YG EM++L DR+++ GPTHEEV T + + Sbjct: 61 MNEIGAQEVSMPVIQPAELWKTTGRWDDYGPEMMKLKDRHERDFTLGPTHEEVFTHMVKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQI K+RDE+RPRFG++R+REF+MKD YSF + + +Y + Sbjct: 121 ELRSYKQLPLFLYQIGPKYRDEIRPRFGLLRAREFIMKDGYSFHDSDQSLNETYEACKNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSK 225 Y +I ++GLK I + A SG IGG+ SHEF+ A GET + C K Sbjct: 181 YRKITEKIGLKYIIIEAASGAIGGNESHEFVSFAPVGETNLLKCEK 226 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++GIE+ IF GTKYS M+A + G+ MG YG G R +AA++E HD GI Sbjct: 402 SKGIEIAQIFKLGTKYSKAMNALYMDDKGEVKPFIMGCYGWGISRTMAAIVEQLHDEDGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SVAPF++ + + A DQ R +K+Y L DV DD G +F ADL+ Sbjct: 462 LWPRSVAPFELIITVVSAQDQDQRIFAQKLYNSLLSSEIDVLLDDRDISPGMKFKDADLI 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 GFPL++ VG K + + VE+K R Sbjct: 522 GFPLRITVG-KSLKEGMVELKSR 543 >gi|148235110|ref|NP_001079554.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Xenopus laevis] gi|28278090|gb|AAH44273.1| MGC53152 protein [Xenopus laevis] Length = 466 Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 139/435 (31%), Positives = 225/435 (51%), Gaps = 35/435 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + P + S KLM++ G+I + G + +LP +A++ + +I +E G ++ + Sbjct: 51 ESKPNEPTSKSQKLMIKAGLIRPSNPGCFHYLPYTVRAMEKLIRLIDKEMQDIGGQKIDM 110 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPF 130 PTL SA LW +SGR+D GKE+ RL DR+++ GPTHEE++T + S + + LP Sbjct: 111 PTLGSAALWRQSGRWDLMGKELFRLKDRHNQEYCLGPTHEELVTHLVASEGGINNKELPL 170 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 YQI KFRDE RP FG++R REF MKD Y+FD++ E + +Y + +Y IF LG+ Sbjct: 171 LLYQITRKFRDEQRPCFGLLRGREFYMKDMYTFDISEESAYETYRNVCDAYSNIFRALGV 230 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + ++A++G IGG +SHEF + A+ GE ++ + DF + L Sbjct: 231 HFVKVQADTGNIGGKMSHEFHLPANIGEDRLLVCG----------SCDFSANVELL---- 276 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 +H+EK + + +GIE+GH FY GTKYS A + Sbjct: 277 -----------LHDEKNC-PVCTGQLKETKGIEIGHTFYLGTKYSHVFKANCYDSQKTPF 324 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR--DACEKI 368 +MG YGIG R++AA +E + I WP +AP+++ LI+ K + E + Sbjct: 325 LAEMGCYGIGVSRLLAASLEVLSNEDDIHWPGLIAPYQVCLISPKKGSKEIEAISVAETL 384 Query: 369 YARLSKVGC----DVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFV-SDSKVEIKHRL 422 Y + + C + DD IG + A ++G+P +++G K + + S E++ Sbjct: 385 YDDIIQSVCGLRDETVLDDRSYLTIGKRVKEAHMMGYPYVIVIGKKALETPSLFEVRSHN 444 Query: 423 TGIREDMSLEEVINY 437 T +S E VI++ Sbjct: 445 TDEVHFLSREGVIDF 459 >gi|157414824|ref|YP_001482080.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|172047085|sp|A8FKW6|SYP_CAMJ8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157385788|gb|ABV52103.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] Length = 568 Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 114/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G I Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFIEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGCEFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 237 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 275 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 95/161 (59%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE+SHD Sbjct: 401 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEASHD 460 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 461 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP +++G K + ++++E+ R ++E + +E++ Sbjct: 521 FELMGFPYALVIG-KGLENNEIELIQREGLVKELIKTDELM 560 >gi|205355399|ref|ZP_03222170.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346633|gb|EDZ33265.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] Length = 569 Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 276 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 94/161 (58%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE+SHD Sbjct: 402 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEASHD 461 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 462 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMND 521 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP ++VG K + +++E+ R I+E + +E++ Sbjct: 522 FELMGFPYALVVG-KGLEKNEIELIQREGLIKELIKTDELM 561 >gi|57238257|ref|YP_178662.1| prolyl-tRNA synthetase [Campylobacter jejuni RM1221] gi|81819550|sp|Q5HVM3|SYP_CAMJR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|57167061|gb|AAW35840.1| prolyl-tRNA synthetase [Campylobacter jejuni RM1221] Length = 569 Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 276 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A E+SHD Sbjct: 402 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVATEASHD 461 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 462 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMND 521 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP ++VG K + +++E+ R I+E + +E++ Sbjct: 522 FELMGFPYALVVG-KGLEKNEIELIQREGLIKELIKTDELM 561 >gi|87123890|ref|ZP_01079740.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase [Synechococcus sp. RS9917] gi|86168459|gb|EAQ69716.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase [Synechococcus sp. RS9917] Length = 594 Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 112/228 (49%), Positives = 147/228 (64%), Gaps = 3/228 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEIASH+L+LR G I + GIY++LPL + L +NAI+REE Sbjct: 1 MRVSRLMLVTLRDVPADAEIASHQLLLRGGFIRRVGSGIYAYLPLMWRVLQRINAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA+E +P LQ A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 MNALGALETLLPQLQPAELWERSGRWQGYTAGEGIMFHLDDRQGRQLGLGPTHEEVITSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + Y M Sbjct: 121 AGELLRSYRQLPVTLYQIQSKFRDEIRPRFGLMRGREFIMKDAYSFHADASDLQACYGAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 +Y RIF R GL+++ + A+SG IGG S EF+V A+ GE + S+ Sbjct: 181 DGAYRRIFDRCGLQTVAVEADSGAIGGAASQEFMVTAEAGEDLILMSE 228 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 101/182 (55%), Gaps = 8/182 (4%) Query: 261 DVHNEKLFD---SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N + D S PE ++ RGIEVGHIF G KYS M A+F ADG + MG Y Sbjct: 408 DLRNAQAGDRCQSDPEQTLMARRGIEVGHIFQLGRKYSQAMDASFTNADGGQEALWMGCY 467 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+ A +E HD GI WP ++APF++ ++ + R E +YARL G Sbjct: 468 GIGVSRLAQAAVEQHHDDAGICWPLAIAPFQVIVVVANLQEATQRSLGEDLYARLMAQGV 527 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEE 433 D DD E+ G +F ADL+G P +++VG + +D +VE+ R T + D +LE Sbjct: 528 DALLDDRQERAGVKFKDADLIGIPWRIVVG-RAAADGQVELVERATRQADVLTVDAALER 586 Query: 434 VI 435 V+ Sbjct: 587 VL 588 >gi|315057961|gb|ADT72290.1| Prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3] Length = 568 Score = 226 bits (575), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 237 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 275 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A E+SHD Sbjct: 401 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVATEASHD 460 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 461 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP ++VG K + +++E+ R I+E + +E++ Sbjct: 521 FELMGFPYALVVG-KGLEKNEIELIQREGLIKELIKTDELM 560 >gi|86153499|ref|ZP_01071703.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843225|gb|EAQ60436.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 569 Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 276 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 95/161 (59%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD Sbjct: 402 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHD 461 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 462 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMND 521 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP +++G K + ++++E+ R ++E + +E++ Sbjct: 522 FELMGFPYALVIG-KGLENNEIELIQREDLVKELIKTDELM 561 >gi|206895814|ref|YP_002247094.1| prolyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] gi|226699133|sp|B5Y8J7|SYP_COPPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|206738431|gb|ACI17509.1| prolyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 558 Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 150/222 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK+F L+E+P+DAE SHKL++R MI Q + G+Y++LP G K L + ++REE Sbjct: 1 MRASKFFYKTLREDPKDAEATSHKLLIRASMIKQIASGVYAFLPFGHKVLKKIETVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G EM++ + A++W ++GR++ YG +M++ DR ++ GPTHEE +T + Sbjct: 61 MDRIGGQEMTMSIMMPAEMWKKTGRWELYGDDMIKFKDRKEQDFCLGPTHEEQITTLAGQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E K +Y+++ + Sbjct: 121 LISSYKQLPQLVYQIQTKFRDEPRPRFGLIRLREFVMKDAYSFHDSEESLKTTYDQVLNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 Y RI R+GL + A+ G IGG LSHEFIV A+ GE+ VF Sbjct: 181 YKRILERIGLNYEVVAADPGQIGGTLSHEFIVPAEVGESTVF 222 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 71/160 (44%), Positives = 98/160 (61%), Gaps = 8/160 (5%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 S G+EVGHIF GT+YS P+ A + DG+ MG YGIG R+V+AVIE HD G Sbjct: 397 SFTGLEVGHIFRLGTRYSEPLEAFYHSEDGERKPFIMGCYGIGVTRLVSAVIEQHHDDFG 456 Query: 338 IIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 I+WP SVAP+ + +I I QV +++ LS G DVF DD E+ G +F AD Sbjct: 457 IVWPWSVAPYHVVIIPIGDVEAQV-----QELENTLSSAGLDVFVDDRDERPGVKFVDAD 511 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+GFP++++V +K + KVEIK R TG + E+V++ Sbjct: 512 LIGFPVRLVVNAK--KEGKVEIKFRKTGETLLVGQEDVLD 549 >gi|194467742|ref|ZP_03073728.1| prolyl-tRNA synthetase [Lactobacillus reuteri 100-23] gi|194452595|gb|EDX41493.1| prolyl-tRNA synthetase [Lactobacillus reuteri 100-23] Length = 577 Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 106/218 (48%), Positives = 142/218 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +E P DAE SHK+M+R G I+Q S G++S+LPL + + V IIR+E Sbjct: 1 MKQSKVLIPTKKEVPSDAEALSHKMMIRAGYIYQVSAGVWSYLPLAYRVIRKVENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM +P L ADLW ESGRY+SYG + +L DR D+ I GPTHEE T++ R Sbjct: 61 MDKAGAVEMLMPGLLPADLWKESGRYESYGDNLFKLKDRRDRDFILGPTHEETFTEVLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE RPR+G++R +EF M D YSF EG +YN + Sbjct: 121 SIKSYKKLPLVVYQLQDKFRDEDRPRYGILRGKEFEMLDGYSFSADQEGLDEAYNNQAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y IF R+GL + A+SG +GG S EF A+ GE Sbjct: 181 YRNIFDRIGLNYKVILADSGTMGGKNSQEFSAPAEVGE 218 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 74/179 (41%), Positives = 107/179 (59%), Gaps = 6/179 (3%) Query: 261 DVHNEKLFDSLPENKRVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D N K + P+ K + GIE+GHIF GT YS + A ++G+ V MGSYGI Sbjct: 387 DFRNVKEGEIAPDGKPLKFTPGIEIGHIFKLGTHYSSKLGAQVLDSNGRLTDVIMGSYGI 446 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGC 377 G R+++AV E + D G++WPDS+APF + +I N K DQ+ +KI +L++ G Sbjct: 447 GVTRLLSAVAEQNADENGLVWPDSIAPFDVHVIPVNAKKEDQMA--MADKIDQQLTEAGY 504 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +FA +DL+G P++V VG K D VEIK R TG ++ EE++N Sbjct: 505 EVLVDDRKERAGVKFADSDLIGIPIRVTVGKK-AQDGIVEIKIRKTGETVEVKQEELVN 562 >gi|86151603|ref|ZP_01069817.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|85841232|gb|EAQ58480.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] Length = 569 Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 276 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 95/161 (59%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD Sbjct: 402 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHD 461 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 462 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMND 521 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP +++G K + ++++E+ R ++E + +E++ Sbjct: 522 FELMGFPYALVIG-KGLENNEIELIQREDLVKELIKTDELM 561 >gi|212697111|ref|ZP_03305239.1| hypothetical protein ANHYDRO_01677 [Anaerococcus hydrogenalis DSM 7454] gi|212675886|gb|EEB35493.1| hypothetical protein ANHYDRO_01677 [Anaerococcus hydrogenalis DSM 7454] Length = 447 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 102/232 (43%), Positives = 156/232 (67%), Gaps = 1/232 (0%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +P L+++P+DAE SHKL++R I + S G+YS+LPLG + ++ + I+R+ + +I Sbjct: 1 MPTLRDDPQDAETQSHKLLVRGAFIRKTSSGVYSYLPLGMRVINKIENIVRKSMEKYDSI 60 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E+S LQS D+W +SGR+ ++G EM ++ DR+D+ GPT EE T + + + SY+ Sbjct: 61 EVSTSVLQSKDIWEKSGRWQNFGPEMFKIKDRHDREYCLGPTAEEQFTSLIKDELNSYKQ 120 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP YQI KFRDE RPRFG+ RSR+F+MKDAYSFD+ EG + SY KM+ +Y+ +F Sbjct: 121 LPLNLYQIVSKFRDEKRPRFGINRSRDFIMKDAYSFDVDMEGLEKSYQKMWDAYVEVFDA 180 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 LGL + +SG +GG+ SHEF+ LA+TGE ++F +++ D+ E+ F Sbjct: 181 LGLDYKIVEGDSGAMGGNTSHEFMALAETGEGEIFYTEN-SDYAATDESAKF 231 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 23/37 (62%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 ARGIEVG+IF GTKYS + A F +GK + G Sbjct: 397 ARGIEVGNIFQLGTKYSESLEAYFLDENGKQKTIYNG 433 >gi|218562195|ref|YP_002343974.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|81858473|sp|Q9PHX1|SYP_CAMJE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|112359901|emb|CAL34689.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 569 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 276 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 95/161 (59%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD Sbjct: 402 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHD 461 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 462 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYRDLTNLGLEVLLDDRNERFGVKMND 521 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP +++G K + ++++E+ R ++E + +E++ Sbjct: 522 FELMGFPYALVIG-KGLENNEIELIQREGLVKELIKTDELM 561 >gi|315453026|ref|YP_004073296.1| prolyl-tRNA synthetase [Helicobacter felis ATCC 49179] gi|315132078|emb|CBY82706.1| prolyl-tRNA synthetase [Helicobacter felis ATCC 49179] Length = 577 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/226 (47%), Positives = 144/226 (63%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F P +E P+DA + SH+ M++ G + Q G+Y +LPLG K L + A+++E Sbjct: 1 MRFSQLFAPTTKEVPKDAVLKSHQFMVQGGYLQQMGSGLYHFLPLGHKVLSKIRAVVKEV 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E ++ + A LW ESGR++ YGKE+L DR + + PTHEE +T I +S Sbjct: 61 MDSYGAQECTLGFVVPASLWQESGRFEQYGKELLSFPDRKNNLCVLSPTHEEAITQIAKS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 HIKSY+ LP YQI KFRDE+RPRFG+MR+REF+MKDAYSF + E + +M + Sbjct: 121 HIKSYKQLPLNLYQIHTKFRDEIRPRFGLMRAREFVMKDAYSFHASTECLDKEFERMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSK 225 Y IF RLGL + A+SG IGG S EF+VLA GE V C K Sbjct: 181 YSEIFSRLGLNFRAVEADSGAIGGSKSKEFVVLAACGEDSVIVCQK 226 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 2/151 (1%) Query: 261 DVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D+ PE + R IEVGHIF G KYS + A + +G+ Y +MG YG Sbjct: 394 DIAQARPEDACPECQGTLSEQRSIEVGHIFKLGNKYSKSLEARYLDQEGQLQYFEMGCYG 453 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A++E + D KG +W + APF++ ++ + D E++Y L G D Sbjct: 454 IGVSRLMSAILEQNSDEKGCVWSKTSAPFEVVVLVANSKDSALESLGEELYQELKGAGVD 513 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 V DD ++ G++ A +L+G +IVG + Sbjct: 514 VLLDDRIDRFGAKMADFELIGCSHALIVGKQ 544 >gi|88597079|ref|ZP_01100315.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|88190768|gb|EAQ94741.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|315927040|gb|EFV06395.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 568 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 237 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 275 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 95/161 (59%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD Sbjct: 401 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHD 460 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 461 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYRDLTNLGLEVLLDDRNERFGVKMND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP +++G K + ++++E+ R ++E + +E++ Sbjct: 521 FELMGFPYALVIG-KGLENNEIELIQREGLVKELIKTDELM 560 >gi|86149024|ref|ZP_01067256.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840382|gb|EAQ57639.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] Length = 569 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 276 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 95/161 (59%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD Sbjct: 402 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHD 461 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 462 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYRDLTNLGLEVLLDDRNERFGVKMND 521 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP +++G K + ++++E+ R ++E + +E++ Sbjct: 522 FELMGFPYALVIG-KGLENNEIELIQREGLVKELIKTDELM 561 >gi|300864298|ref|ZP_07109176.1| Prolyl-tRNA synthetase [Oscillatoria sp. PCC 6506] gi|300337687|emb|CBN54322.1| Prolyl-tRNA synthetase [Oscillatoria sp. PCC 6506] Length = 601 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 113/229 (49%), Positives = 148/229 (64%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E P +AEI SHKL+LR G I + G+Y +LPL + L V+ I+REE Sbjct: 1 MRLSQMLFATLREEPAEAEIPSHKLLLRAGYIRRIGSGVYVYLPLLWRVLKKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA E +P LQ A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MDATGAQECLLPQLQPAELWRESGRWDTYTKAEGIMFALTDRQNRELGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF E K +Y M Sbjct: 121 AKDMIRSYRQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHKDEESLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y + R GL+ + A+SG IGG S EF+VLA+ GE +V ++D Sbjct: 181 AQAYSNMLRRCGLEFRGVDADSGAIGGSGSQEFMVLAEAGEDEVLYTED 229 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 98/165 (59%), Gaps = 5/165 (3%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P +ARGIEVGHIF GTKYS M AT+ G++ + MG YG+G R+ + +E Sbjct: 427 PAQTLQTARGIEVGHIFQLGTKYSQAMGATYTNEQGEEIPLVMGCYGLGVSRLAQSAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 S+D GIIWP ++AP++ IS+ NI Q+ + EK+Y L++ G + DD E+ G Sbjct: 487 SYDKDGIIWPVAIAPYQVIISIPNISDAQQI--EVAEKLYTELNQAGVETLLDDRDERAG 544 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +F ADL+G P +++ G + + KVE+ R ++++++V Sbjct: 545 VKFKDADLIGIPYRIVTG-RSLKQGKVEVVERAAHKSHEIAIDDV 588 >gi|148925913|ref|ZP_01809600.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486] gi|145844899|gb|EDK22003.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486] Length = 576 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 9 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 68 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 69 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 128 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 129 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 188 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 189 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 244 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 245 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 283 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A E+SHD Sbjct: 409 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVATEASHD 468 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 469 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMND 528 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP ++VG K + +++E+ R I+E + +E++ Sbjct: 529 FELMGFPYALVVG-KGLEKNEIELIQREGLIKELIKTDELM 568 >gi|307720827|ref|YP_003891967.1| prolyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] gi|306978920|gb|ADN08955.1| prolyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] Length = 568 Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/226 (47%), Positives = 146/226 (64%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MRRSK F+P +E P DA + SH + R G I Q + G+Y++LPL ++ + + II EE Sbjct: 1 MRRSKAFIPTTKEAPSDATLPSHIFLSRAGFITQVAAGLYNYLPLAKRVIKKIENIINEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ + + A+LW ESGR + +GKE+LR DR + + GPTHEE+M D+ R+ Sbjct: 61 MTKIGAQEVELSFVTPAELWQESGRIEKFGKELLRFHDRKNNLFVLGPTHEEMMVDVVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+NLP YQI+ KFRDE RPRFG+MR REF+MKD YSF T E ++ + + Sbjct: 121 RVTSYKNLPLNLYQIKTKFRDEARPRFGLMRGREFIMKDGYSFHATTEDLDREFDTVEEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 Y +I RLGL + A+SG IGG S E +VLAD+GE T CSK Sbjct: 181 YKKILTRLGLDFRIVEADSGAIGGSGSKELMVLADSGEDTIAVCSK 226 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/160 (40%), Positives = 94/160 (58%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVGHIF GT YS + A F +GK MG+YG+G R+VAAVIE HD G Sbjct: 406 TKGIEVGHIFKLGTTYSEALKAEFLDENGKAQPFIMGTYGMGVSRMVAAVIEQHHDDNGC 465 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW + AP+ ++++ NIK QV A EK+Y +L +V DD E+ G + A+ Sbjct: 466 IWTKATAPYMVNIMISNIKDEAQV--QAGEKLYKQLQDADVEVMLDDRKERFGFKMKDAE 523 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+GFP +++G + V + ++I R+T + D+ EE+ N Sbjct: 524 LIGFPYTIVIGKELV-NGHMQIFERVTKEKTDIKSEEIFN 562 >gi|224373093|ref|YP_002607465.1| prolyl-tRNA synthetase [Nautilia profundicola AmH] gi|254782910|sp|B9LA07|SYP_NAUPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|223588823|gb|ACM92559.1| prolyl-tRNA synthetase [Nautilia profundicola AmH] Length = 574 Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 150/226 (66%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F +E P+DA +ASHK ++R G I Q + GIY + PLG+ LDN+ II++E Sbjct: 1 MRWSRFFAYTQKEAPKDAVVASHKYLVRGGYIKQVAAGIYDFAPLGKMVLDNIRDIIKKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +GA E+ + + +LW E+GR YGKE+LR+ DR D++ + PT+EE + D+ R Sbjct: 61 MDASGAQEVMLTFVTPNELWEETGRAKKYGKELLRIKDRKDQSFVLAPTNEESVVDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI LKFRDE RPRFG++R REF+MKDAYSF T E +N M + Sbjct: 121 TIKSYKQLPVNLYQINLKFRDEARPRFGLLRGREFIMKDAYSFHATEEDLDREFNLMEET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y IF +LGL + A+SG IGG S EF+VLADTGE V CS+ Sbjct: 181 YKNIFTKLGLDFRAVWADSGAIGGSGSKEFMVLADTGEDDIVVCSE 226 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 73/163 (44%), Positives = 103/163 (63%), Gaps = 9/163 (5%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVGHIF GT YS PM+ATF +GK MG YGIG R+++A IE +HD KGI Sbjct: 410 TKGIEVGHIFKLGTVYSEPMNATFLDENGKAKPFIMGCYGIGVSRLISAAIEQNHDDKGI 469 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +APF + +I ++K +Q+ E +Y +L+ G DD E+ G + A + Sbjct: 470 IWPKQIAPFVVDIIVGDVKKDEQLI--FAEDLYDKLTSAGVKTILDDRAERFGPKIADFE 527 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEVI 435 L+GFP+ VIVG K + D KVE++ R TG + +DM+LE+V+ Sbjct: 528 LVGFPVCVIVGKK-LKDGKVEVRDRRTGEKFEVEKDMALEKVM 569 >gi|329769169|ref|ZP_08260589.1| prolyl-tRNA synthetase [Gemella sanguinis M325] gi|328839388|gb|EGF88966.1| prolyl-tRNA synthetase [Gemella sanguinis M325] Length = 566 Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 119/315 (37%), Positives = 176/315 (55%), Gaps = 20/315 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P +E P AE SHKL+++ GM+ Q S G+Y++LPL K + N+ +IR+E Sbjct: 1 MRQSRTFIPTTREVPSSAEAISHKLLIKAGMVKQVSAGVYTYLPLATKVIQNIEKVIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P LQS D W +SGR+ G E++R+ DR + PT EEV+ + Sbjct: 61 HAKIGASELLMPILQSEDYWKQSGRWYKMGDELIRVTDRKNAGYALSPTAEEVICQTVSN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPR G++R +EF+MKD YSF +PE + +YN + + Sbjct: 121 MVTSYKQLPVNLYQIQTKFRDEIRPRLGLLRGKEFIMKDGYSFHDSPESLRETYNDYYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R LK ++A+SG IGG +HEF LA+ GE D + +E +D+ Sbjct: 181 YSNIFDRFELKYRAVKADSGNIGGSYTHEFQALAEVGE----------DTIVYTEESDYA 230 Query: 241 DIISLNSIVEQ-WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I ++VEQ +T P T E+ P + + Y G + + M Sbjct: 231 ANIETAAVVEQNYTMP---TDYEKKERSLLETPNQQTIDDIAA------YCGVEVNRAMK 281 Query: 300 ATFKGADGKDHYVQM 314 A ADG+ + V M Sbjct: 282 ALALKADGEFYLVLM 296 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/160 (43%), Positives = 104/160 (65%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG +F G YS M T+ A+G+ ++ MG YGIG RV++A+IE +D GI Sbjct: 403 AKGIEVGQVFELGKGYSESMDITYLDANGRANHFYMGCYGIGVSRVISAIIEQHNDENGI 462 Query: 339 IWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP V P+++ L ++IK +QV + E++Y +L++ G +V +DD E+ G +F AD Sbjct: 463 IWPKEVTPYQVHLVCVDIKKEEQVKQ--SEELYKQLTEAGYEVLYDDRAERAGVKFNDAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+G PLQV+VG K V D VE+K R T + D +E+V++ Sbjct: 521 LIGIPLQVVVGKK-VGDGIVEVKERKTLEKVDTKVEDVLS 559 >gi|221124302|ref|XP_002161215.1| PREDICTED: hypothetical protein [Hydra magnipapillata] Length = 587 Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 106/198 (53%), Positives = 140/198 (70%), Gaps = 1/198 (0%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 +R GMI + GIY+++P+G + + V AI+REE NR GA+E+++P +Q A+LW E+GR+ Sbjct: 1 MRAGMIKKLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVELTMPVIQPAELWQETGRF 60 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D G E+LR+ DR+++ + PT EEV+TDI R IKSY+ LP YQIQ KFRDE RPR Sbjct: 61 DKMGPELLRIKDRHERDYVVQPTSEEVVTDIARQEIKSYKQLPKNLYQIQTKFRDERRPR 120 Query: 147 FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 FG+MR REF+MKDAYSFD + +K SY M +Y RIF R GL + A+SG IGGDL Sbjct: 121 FGLMRGREFIMKDAYSFDRDQDSAKASYQVMAKAYRRIFDRFGLTYRAVAADSGAIGGDL 180 Query: 207 SHEFIVLADTGETQ-VFC 223 S EF V+A TGE V+C Sbjct: 181 SEEFQVIAATGEDAIVYC 198 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 76/187 (40%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D+ P+ K V A RGIEVGH+FY GTKYS M+ATF +GK +++MG Sbjct: 366 VADLRNVVEGDASPDGKGVLAIERGIEVGHVFYLGTKYSKAMNATFLDVNGKPQFMEMGC 425 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD KGIIWPD++APF + L I + A +K+Y L Sbjct: 426 YGIGITRLPAAAIEQNHDDKGIIWPDALAPFTVVLCPINPDRFPDVKAAADKLYEELLSA 485 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G+ FA +L+G P +V +G + + + VE +HR + + E+ Sbjct: 486 GVDVILDDRNERPGAMFADWELIGVPHRVNIGDRGLKEGVVEYQHRRESAATSVPVAEIA 545 Query: 436 NYASHRF 442 + R Sbjct: 546 SLLLGRL 552 >gi|305433094|ref|ZP_07402250.1| proline--tRNA ligase [Campylobacter coli JV20] gi|304443795|gb|EFM36452.1| proline--tRNA ligase [Campylobacter coli JV20] Length = 569 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 115/285 (40%), Positives = 166/285 (58%), Gaps = 16/285 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MKFSKLYAPSLKEAPKDATLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y +I R+GL + A+SG IGG S EF+VLA GE + + EN D+ Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDI----------LICENCDYA 231 Query: 240 ---DDIISLNSIV--EQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 + + N E+ A YA+ N K DSL + +++A Sbjct: 232 ANVEAAVRANKTCDEERPEANYASKFHTPNIKTIDSLAQFFKINA 276 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 91/159 (57%), Gaps = 1/159 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG Sbjct: 406 SKGIEVGHIFKLGQKYSKAMNANFLDENGKSKPFYMGCYGIGVSRLLAVAIEANHDEKGC 465 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IW ++APF + +I D+ + K+Y LS G +V DD E+ G + +L+ Sbjct: 466 IWNKTLAPFTLEIIISNIKDEKSLEFATKLYEDLSNAGIEVLLDDRNERFGVKMNDFELM 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 GFP ++VG D ++E R T ++ +S +EV ++ Sbjct: 526 GFPYALVVGKGLEKD-ELEFIDRKTLEKKIISSKEVFDF 563 >gi|300813650|ref|ZP_07093972.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512192|gb|EFK39370.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 570 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 102/226 (45%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++P L+E+P+DAEI SHK +LR G I + + GIY++L LG + + + I+REE Sbjct: 1 MRLSKLYMPTLREDPQDAEIVSHKFLLRGGFIRKSASGIYTYLTLGYRVVRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + +Q ++W +SGR++ YG EM +L DR+D+ GPT EE T + + Sbjct: 61 MDRCGSQEILMSAIQPREIWEDSGRWEKYGPEMFKLKDRHDRDFCLGPTAEEYFTTLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP YQIQ K+RDE RPRFG+ R+REF MKDAY+FD EG + SY M+ + Sbjct: 121 EVNSYKDLPLNLYQIQTKYRDEKRPRFGINRAREFSMKDAYTFDEDLEGLEKSYMNMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y ++F RL L + ++G +GG SHEFI LA++GE + S++ Sbjct: 181 YEKVFDRLSLNYKIVEGDNGAMGGSGSHEFIALAESGEGVIVFSEN 226 Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 67/168 (39%), Positives = 97/168 (57%), Gaps = 1/168 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVG+IF GTKYS ++AT+ +GK Y MGSYGIG R VAA++E ++D GI Sbjct: 403 ARGIEVGNIFQLGTKYSKSLNATYLDRNGKAQYFYMGSYGIGITRTVAAIVEQNYDENGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP + AP++ + I +++ ++ EKIY L + G +V DD + G +F DL+ Sbjct: 463 IWPVATAPYECIVTVINPNNEEQKELGEKIYKSLQEKGIEVLIDDRDLRAGVKFKDRDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 G P+++ VG K SD VE R ++S + I A + R Sbjct: 523 GIPVRITVGKK-ASDDVVEYSLRKEMKNSEISSQSAIESAIKEVYDGR 569 >gi|282883093|ref|ZP_06291693.1| proline--tRNA ligase [Peptoniphilus lacrimalis 315-B] gi|281297070|gb|EFA89566.1| proline--tRNA ligase [Peptoniphilus lacrimalis 315-B] Length = 570 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 102/226 (45%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++P L+E+P+DAEI SHK +LR G I + + GIY++L LG + + + I+REE Sbjct: 1 MRLSKLYMPTLREDPQDAEIVSHKFLLRGGFIRKSASGIYTYLTLGYRVVRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + +Q ++W +SGR++ YG EM +L DR+D+ GPT EE T + + Sbjct: 61 MDRCGSQEILMSAIQPREIWEDSGRWEKYGPEMFKLKDRHDRDFCLGPTAEEYFTTLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP YQIQ K+RDE RPRFG+ R+REF MKDAY+FD EG + SY M+ + Sbjct: 121 EVNSYKDLPLNLYQIQTKYRDEKRPRFGINRAREFSMKDAYTFDEDLEGLEKSYMNMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y ++F RL L + ++G +GG SHEFI LA++GE + S++ Sbjct: 181 YEKVFDRLSLNYKIVEGDNGAMGGSGSHEFIALAESGEGVIVFSEN 226 Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 67/168 (39%), Positives = 97/168 (57%), Gaps = 1/168 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVG+IF GTKYS ++AT+ +GK Y MGSYGIG R VAA++E ++D GI Sbjct: 403 ARGIEVGNIFQLGTKYSKSLNATYLDRNGKAQYFYMGSYGIGITRTVAAIVEQNYDENGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP + AP++ + I +++ ++ EKIY L + G +V DD + G +F DL+ Sbjct: 463 IWPVATAPYECIVTVINPNNEEQKELGEKIYKSLQEKGIEVLIDDRDLRAGVKFKDRDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 G P+++ VG K SD VE R ++S + I A + R Sbjct: 523 GIPVRITVGKK-ASDDVVEYSLRKEMKNSEISSQSAIESAIKEVYDGR 569 >gi|154249367|ref|YP_001410192.1| prolyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] gi|171769336|sp|A7HKV2|SYP_FERNB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|154153303|gb|ABS60535.1| prolyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] Length = 574 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 104/225 (46%), Positives = 152/225 (67%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+++ P L+E P DAE+ S +L+ R G I + + G+Y++LPLG++ L + I+REE Sbjct: 1 MRFSQFYAPTLKEAPADAEVPSQELLTRAGFIRKIAAGVYTYLPLGRRVLLKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P +Q A+LW +SGR++ YG EM++L DR+ + GPTHEE++T + ++ Sbjct: 61 MDNIGANEILMPIIQPAELWKQSGRWEDYGPEMMKLKDRHGRDFTLGPTHEELVTFLVQN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T YQ+ K+RDE+RPRFGV+R+REF+MKD YSF E +Y + Sbjct: 121 ELNSYKQLPITLYQMANKYRDEIRPRFGVLRAREFIMKDGYSFHSDWESLDETYKAHRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCS 224 Y I R+GLK + A SG IGG+ SHEF+ ADTGE+ V FC Sbjct: 181 YSNIMERIGLKYAVVEASSGAIGGNESHEFVAFADTGESNVLFCE 225 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 65/162 (40%), Positives = 94/162 (58%), Gaps = 5/162 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + +GIE+GHIF GTKYS M + + DG+ MG YG G R + A++E HD KG Sbjct: 400 AKKGIELGHIFKLGTKYSEAMGSKYMDKDGQLKPFIMGCYGWGVSRTLGAIVEQLHDEKG 459 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP SVAPF + + + ++ + + E++Y L + G +V DD G +F ADL Sbjct: 460 IIWPLSVAPFAVVITPVSNNENLMK-FSEELYNFLVEKGEEVLLDDRNISPGMKFNDADL 518 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTG--IREDMSLEEVINY 437 +G P +V VG K +S+ VEIK R TG + +LEE+ + Sbjct: 519 IGIPFRVTVG-KALSEGMVEIKWR-TGQQFKVKATLEEIYEF 558 >gi|78212243|ref|YP_381022.1| prolyl-tRNA synthetase [Synechococcus sp. CC9605] gi|114152271|sp|Q3ALR5|SYP_SYNSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78196702|gb|ABB34467.1| prolyl-tRNA synthetase [Synechococcus sp. CC9605] Length = 593 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/229 (48%), Positives = 146/229 (63%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +AEI SH+L+LR G I + GIY++LPL + L + A++REE Sbjct: 1 MRVSRLLLVTLRDVPAEAEITSHQLLLRAGYIRRVGSGIYAYLPLMWRVLQKITAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 NR GA E +P L A+LW +SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 MNRAGAQETLLPQLHPAELWQKSGRWQGYTAGEGIMFHLEDRQGRELGLGPTHEEVITSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + + +Y M Sbjct: 121 AGELLRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHASEADLRETYGAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y RIF R GL ++P+ A+SG IGG S EF+V AD GE + S D Sbjct: 181 DQAYRRIFERCGLDAVPVDADSGAIGGAASQEFMVTADAGEDLILISDD 229 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 75/230 (32%), Positives = 107/230 (46%), Gaps = 13/230 (5%) Query: 200 GPIGGDLSHEFIVLADTGETQVF-----CSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 G IG DLS + + A T + + + F + D + + +EQ Sbjct: 346 GSIGPDLSDDVLKGAKTWQPTFLRLADETASELGSFICGANQPDLHRFNTSWTAIEQ--- 402 Query: 255 PYAATSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 T D+ N + D E++ RGIEVGHIF G KYS M + F +GK Sbjct: 403 -KPTTLDLRNARAGDVCQHNLESRLTEKRGIEVGHIFQLGRKYSEAMESGFTNENGKTEP 461 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 MG YGIG R+ A +E HD GI WP ++APF+ ++ D E +YA Sbjct: 462 FWMGCYGIGVSRLAQAAVEQHHDDSGICWPTAIAPFEAIVVVANIQDDTQGQLGEALYAE 521 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L DV DD E+ G +F ADL+G P +++VG + S+ VE+ R Sbjct: 522 LQAADVDVLLDDRKERAGVKFKDADLIGIPWRIVVG-RDASEGIVELVRR 570 >gi|260436778|ref|ZP_05790748.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8109] gi|260414652|gb|EEX07948.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8109] Length = 597 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/229 (48%), Positives = 146/229 (63%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +AEI SH+L+LR G I + GIY++LPL + L + A++REE Sbjct: 5 MRVSRLLLVTLRDIPAEAEITSHQLLLRAGYIRRVGSGIYAYLPLMWRVLQKITAVVREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 NR GA E +P L A+LW +SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 65 MNRAGAQETLLPQLHPAELWQKSGRWQGYTAGEGIMFHLEDRQGRELGIGPTHEEVITSL 124 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + + +Y M Sbjct: 125 AGELLRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHASEADLRETYGAM 184 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y RIF R GL ++P+ A+SG IGG S EF+V AD GE + S D Sbjct: 185 DQAYRRIFERCGLDAVPVDADSGAIGGAASQEFMVTADAGEDLILISDD 233 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 111/229 (48%), Gaps = 11/229 (4%) Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS--ENTDFDDIISLNSIVEQWTAPYA 257 G IG DLS + + A T E D + S + D+ N+ WTA Sbjct: 350 GSIGPDLSDDVLQGAKTWEPTFLRLADATASELGSFICGANKPDLHRFNT---SWTAIGQ 406 Query: 258 ATS--DVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 + D+ N + D P+++ RGIEVGHIF G KYS M + F +GK Sbjct: 407 KPTRLDLRNARAGDVCQHNPKSRLTEKRGIEVGHIFQLGRKYSQAMESRFTNENGKTEPF 466 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R+ A +E HD GI WP ++APF+ ++ D + E +YA L Sbjct: 467 WMGCYGIGVSRLAQAAVEQHHDDSGICWPTAIAPFEAIVVVANIQDDIQAQLGEALYAEL 526 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G DV DD E+ G +F ADL+G P +++VG + S+ VE+ R Sbjct: 527 QAAGVDVLLDDRKERAGVKFKDADLIGIPWRIVVG-RDASEGTVELVCR 574 >gi|124022453|ref|YP_001016760.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] gi|152112941|sp|A2C7N5|SYP_PROM3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|123962739|gb|ABM77495.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] Length = 599 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 112/229 (48%), Positives = 148/229 (64%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEIASH+L+LR G I + + GIY++LPL + L + AI++EE Sbjct: 1 MRVSRLMLVTLRDVPADAEIASHQLLLRGGYIRRVTSGIYAYLPLMWRVLRKITAIVQEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA+E +P LQ A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 MDATGALETLLPQLQPAELWRRSGRWQGYTAGEGLMFHLEDRQGRELGLGPTHEEVITSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF +Y M Sbjct: 121 AGDLLRSYRQLPVTLYQIQSKFRDEIRPRFGLMRGREFIMKDAYSFHACEADLAMTYTAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y RIF R GL+++ + A+SG IGG S EF+V AD GE + S D Sbjct: 181 DEAYQRIFSRCGLETVAVEADSGAIGGASSQEFMVTADAGEDLILISGD 229 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 1/167 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS + A F G MG YGIG R+ A +E HD G+ Sbjct: 430 RGIEVGHIFQLGRKYSEALEACFTNDKGTQEPFWMGCYGIGISRLAQAAVEQHHDEAGMN 489 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++APF++ ++ D+V + E++Y+ L +V DD E+ G +F ADL+G Sbjct: 490 WPLAIAPFEVIIVVANIQDEVQQKLAEQLYSELQAADIEVLLDDRNERAGVKFKDADLIG 549 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 P +++VG + + +VE+ R + E +S + + N+ Sbjct: 550 IPWRIVVG-RDAAKGQVELIQRSSRKVEILSATQAFTALVQEIAANQ 595 >gi|121612398|ref|YP_001000243.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|152016593|sp|A1VYQ2|SYP_CAMJJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|87250412|gb|EAQ73370.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] Length = 569 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 165/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKKNEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 276 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 95/161 (59%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD Sbjct: 402 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHD 461 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 462 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMND 521 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP +++G K + ++++E+ R ++E + +E++ Sbjct: 522 FELMGFPYALVIG-KGLENNEIELIQREDLVKELIKTDELM 561 >gi|153952152|ref|YP_001398429.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] gi|166980114|sp|A7H4J9|SYP_CAMJD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152939598|gb|ABS44339.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] Length = 569 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 115/285 (40%), Positives = 164/285 (57%), Gaps = 16/285 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + + EN D+ Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDI----------LICENCDYA 231 Query: 241 DIISLNSIV------EQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 I E+ A YA+ N K DSL + + +A Sbjct: 232 ANIEAAKRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKTNA 276 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 59/160 (36%), Positives = 94/160 (58%), Gaps = 1/160 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE+SHD Sbjct: 402 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEASHD 461 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+++G +V DD E+ G + Sbjct: 462 EKGCIWNKTLAPFVLEIIVSNIKDEKTLEFANKLYEDLTELGLEVLLDDRNERFGVKMND 521 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +L+GFP +++G K + ++++E R ++E + +E+ Sbjct: 522 FELMGFPYALVIG-KGLENNEIEFIQREGLVKELIKTDEL 560 >gi|148241975|ref|YP_001227132.1| prolyl-tRNA synthetase [Synechococcus sp. RCC307] gi|166980166|sp|A5GSC0|SYP_SYNR3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|147850285|emb|CAK27779.1| Prolyl-tRNA synthetase [Synechococcus sp. RCC307] Length = 600 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 111/229 (48%), Positives = 148/229 (64%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S L L+++P +AEI SHKL+LR G I + + GIY++LPL + L V+AI+R+E Sbjct: 1 MRVSALLLVTLRDDPAEAEIPSHKLLLRGGYIRRVASGIYAYLPLMWRVLRKVSAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + GA+E +P LQ A+LW SGR+ Y M L DR D+ + GPTHEEV+T + Sbjct: 61 MDAAGALETLLPQLQPAELWQRSGRWSGYTAGEGIMFHLQDRQDRELGLGPTHEEVITAL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + E Y M Sbjct: 121 AADLLRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHASAEDLGRGYAAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y RIF R GL+ + ++A+SG IGG S EF+V A+ GE + S D Sbjct: 181 DQAYRRIFSRCGLQVVAVQADSGAIGGSASQEFMVTAEAGEDLILSSAD 229 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 92/157 (58%), Gaps = 1/157 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P + + RGIEVGHIF G KYS + ATF G+D + MG YGIG R+ A +E Sbjct: 424 PSQQLQARRGIEVGHIFQLGLKYSEALGATFANEQGQDAPLWMGCYGIGVSRLAQAAVEQ 483 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD G++WP +APF++ ++ + + + E +Y +L + G DV DD E+ G + Sbjct: 484 HHDSAGMVWPVPIAPFEVVIVIASSKEAQQVELAEDLYGQLQQAGVDVLLDDRNERAGVK 543 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 F A+L+G P +++VG V + +VE+ R +G +++ Sbjct: 544 FKDAELIGIPWRLVVGRGAV-NGQVELVERCSGEKQE 579 >gi|167005199|ref|ZP_02270957.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] Length = 568 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 165/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKKNEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 237 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 275 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 95/161 (59%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD Sbjct: 401 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHD 460 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 461 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP +++G K + ++++E+ R ++E + +E++ Sbjct: 521 FELMGFPYALVIG-KGLENNEIELIQREDLVKELIKTDELM 560 >gi|189485415|ref|YP_001956356.1| prolyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|226701354|sp|B1H063|SYP_UNCTG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|170287374|dbj|BAG13895.1| prolyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 569 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 116/263 (44%), Positives = 154/263 (58%), Gaps = 16/263 (6%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK +P L+E P DA+I S KLM+R+GMI + + G Y LPLG K L V IIR+E N Sbjct: 4 SKMLIPTLKEAPSDADIVSVKLMVRSGMIRKLASGFYELLPLGLKVLRKVENIIRQEMNS 63 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW+E+ R+++YGKE+ +L DR D PT EEV+TD+ R IK Sbjct: 64 AGGQEVIFPLVFPKALWLETDRWNAYGKELFKLKDRKDAEFCLAPTAEEVVTDLIRKDIK 123 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY+ LP YQ KFRDE+RPRFGVMRSREFLMKDAYSF + Y MF +Y Sbjct: 124 SYKQLPVMLYQFGTKFRDEIRPRFGVMRSREFLMKDAYSFHADEADLEKYYKTMFDAYTN 183 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDF--------------- 227 I + G + + A SG IGG SHEF+VL DTGE ++ +CS + Sbjct: 184 ICIKCGFQFRAVEAASGVIGGSFSHEFMVLTDTGEEEMTWCSCGYGANSAKTECLKIEQS 243 Query: 228 MDFPIPSENTDFDDIISLNSIVE 250 + P+PSE D+ ++ + + Sbjct: 244 KEEPLPSEEIFTTDVCAIEDVAK 266 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 68/169 (40%), Positives = 105/169 (62%), Gaps = 3/169 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS---ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ K D+ P K+ +RGIE+GH F G KYS M+A++ A+GK+ ++ MG Sbjct: 378 VADIRKVKRGDTCPRCKKEELKFSRGIEIGHTFKLGDKYSKSMNASYLDANGKEKFIIMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R++AA+IE SHD GIIW +++APF++ ++ + D+ ++ EKIY LS Sbjct: 438 CYGIGVTRILAAIIEQSHDDDGIIWTNNIAPFEVVIVPLNYADEKTKETTEKIYKELSSK 497 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 G DV DD E+ G +F ADL+G P ++ + K +++ VE+K R G Sbjct: 498 GLDVLIDDRDERAGIKFKDADLIGIPYRITISEKNLANGNVELKARRDG 546 >gi|283954167|ref|ZP_06371692.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] gi|283794446|gb|EFC33190.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] Length = 568 Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 112/279 (40%), Positives = 167/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDAILPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLEREFELMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 181 YSQILQRMGLDFRAVEANSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 + E+ A YA+ N K +SL + +++A Sbjct: 237 KRVKKTCQDERPEANYASKFYTPNIKTIESLAQFFKINA 275 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 95/161 (59%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD Sbjct: 401 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGISRLLAVAIEANHD 460 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW +APF + +I D+ + K+Y L+K+G +V DD E+ G + Sbjct: 461 EKGCIWNKVLAPFVLEIIVSNIKDEKALEFANKLYEDLTKLGLEVLLDDRNERFGVKMND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP +++G K + +++VE+ R +E + ++E++ Sbjct: 521 FELMGFPYALVIG-KGLENNEVELIQREALTKELVKIDELM 560 >gi|157165397|ref|YP_001466693.1| prolyl-tRNA synthetase [Campylobacter concisus 13826] gi|171855061|sp|A7ZD35|SYP_CAMC1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|112800481|gb|EAT97825.1| prolyl-tRNA synthetase [Campylobacter concisus 13826] Length = 566 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 99/225 (44%), Positives = 143/225 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK++ P +E P+DA + SH+ ++R G + Q G+Y++LPLG+ D ++ +++EE Sbjct: 1 MKFSKFYAPTTKEAPKDASLPSHQFLIRGGFVEQIGSGLYNYLPLGKIMHDKISRVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+S + S +LW +SGRY+ +GKE+LR DR D + PT+EE + R Sbjct: 61 MNEAGALEVSFSVVTSGELWKQSGRYNVFGKELLRFKDRKDNDFVISPTNEEAAVALVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG++R REF MKD YSF + E K ++ M + Sbjct: 121 KVTSYKQLPLNLYQINTKFRDEARPRFGLLRGREFTMKDGYSFHSSKEDLKREFDLMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y +IF RLGL + A+SG IGG S EF+VLA GE + C + Sbjct: 181 YSKIFTRLGLNFRAVEADSGAIGGSGSKEFMVLASNGEDDILCCE 225 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++GIEVGHIF G KYS M+AT+ +GK MG YGIG R++A +IE+SHD KG Sbjct: 404 SKGIEVGHIFQLGDKYSAAMNATYLDENGKVKPFLMGCYGIGISRLIAVMIEASHDEKGC 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IW APF + +I D+ ++Y L K G V DD E+ G + +L+ Sbjct: 464 IWKKECAPFDVEIIISNLKDEAGVKFAFELYESLKKAGVSVIIDDRNERFGVKMNDFELI 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 GFP ++VG +F ++ KVE R Sbjct: 524 GFPYALLVGKEF-ANGKVEFITR 545 >gi|34557905|ref|NP_907720.1| prolyl-tRNA synthetase [Wolinella succinogenes DSM 1740] gi|81832821|sp|Q7M8L1|SYP_WOLSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|34483623|emb|CAE10620.1| PROLYL-TRNA SYNTHETASE [Wolinella succinogenes] Length = 570 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 102/221 (46%), Positives = 147/221 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +F P L+E P+DA + SH+ ++R G I Q GIY++LPLG++ +D + +++EE Sbjct: 1 MRFSAFFAPTLKEAPKDATLKSHEYLIRGGYIQQVGSGIYNFLPLGKRVMDKIRQVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ + + A+LW SGR++ YGKE+LR DR + + GPTHEE++ ++ + Sbjct: 61 MDQAGAQEVMLGFVTPAELWRNSGRFEKYGKELLRFKDRKENDFVLGPTHEEMVVELAKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP YQI LKFRDE+RPRFG+MR REF+MKD YSF + M + Sbjct: 121 YVKSYKQLPLHLYQIHLKFRDEIRPRFGLMRGREFVMKDGYSFHANEADLIREFELMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF RLGL + A+SG IGG S EF+VLA +GE + Sbjct: 181 YKRIFTRLGLDFRVVEADSGAIGGSGSKEFMVLAQSGEDTI 221 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 65/151 (43%), Positives = 87/151 (57%), Gaps = 1/151 (0%) Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 L E + +GIEVGHIF GT+YS P+ A F +GK + MG YGIG R++AAVIE Sbjct: 401 LCEGRLTYKKGIEVGHIFQLGTRYSEPLGANFLNPEGKSQPLVMGCYGIGVSRLLAAVIE 460 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 HD KG IW S APF + ++ D + E +Y L K G +V DD E+ GS Sbjct: 461 QHHDEKGCIWTKSTAPFNLVIVVSNVKDPSQKAYAENLYNALQKEGIEVLLDDRDERYGS 520 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + A +LLG P VIVG + + +VE+ +R Sbjct: 521 KMADFELLGIPYAVIVGKGLI-EGQVELVNR 550 >gi|88807669|ref|ZP_01123181.1| prolyl-tRNA synthetase [Synechococcus sp. WH 7805] gi|88788883|gb|EAR20038.1| prolyl-tRNA synthetase [Synechococcus sp. WH 7805] Length = 598 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 108/231 (46%), Positives = 151/231 (65%), Gaps = 3/231 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEI SH+L++R G I + GIY++LP+ + L +NAI+R+E Sbjct: 1 MRVSRLMLVTLRDVPADAEIPSHQLLVRGGYIRRIGAGIYAYLPMMWRVLRKINAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + GA+E +P LQ ADLW SGR+ Y M L DR ++ + GPTHEEV+T++ Sbjct: 61 LDSLGALETLLPQLQPADLWERSGRWQGYTAGEGIMFHLEDRQNRQLGLGPTHEEVITEL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + + +Y M Sbjct: 121 AGDLLRSYRQLPVTLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHANQDDLEGTYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 +Y RIF R GL+++ + A+SG IGG S E++V A+ GE + S D + Sbjct: 181 AAAYARIFKRCGLEAVAVDADSGAIGGAASQEYMVTAEAGEDLILTSSDGL 231 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 79/150 (52%), Gaps = 1/150 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P + RGIEVGHIF G KYS + A F + G+ + MG YGIG R+ A +E Sbjct: 421 PSQTLSACRGIEVGHIFQLGRKYSEALDARFTNSAGQQEALLMGCYGIGISRLAQAAVEQ 480 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD GI WP +APF++ ++ K D E +Y G D DD E+ G + Sbjct: 481 HHDDAGICWPVGIAPFQVIVVIAKMKDSNQVALGEGLYQSFLDAGIDALLDDRDERAGVK 540 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 F ADL+G P +++VG + D +VE+ R Sbjct: 541 FKDADLIGIPWRIVVG-RDAGDGEVEVVER 569 >gi|291242165|ref|XP_002740982.1| PREDICTED: prolyl-tRNA synthetase (mitochondrial)(putative)-like [Saccoglossus kowalevskii] Length = 443 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 132/397 (33%), Positives = 208/397 (52%), Gaps = 47/397 (11%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 S +LM+ G+I Q S G+Y LPL ++L+ + +I EE + G ++S+P + +++LW Sbjct: 48 SQRLMMEHGLIRQSSPGVYHLLPLALRSLEKLIRLIDEEMHSIGGTKISMPCMTTSELWK 107 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPFTFYQIQLKFR 140 + R+++ G E+ ++ DR+ GPTHEE +TD+ S + S++ LP YQI KFR Sbjct: 108 ATNRWETNGPELFKVEDRHGIQYCLGPTHEEAVTDLIASQGRLSHKQLPLRIYQITRKFR 167 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 DE RPRFG++R REF MKD Y+FD E + +Y + +Y A++G Sbjct: 168 DEKRPRFGLLRGREFYMKDMYTFDANTENAIKTYEAVNQAYF-------------SADTG 214 Query: 201 PIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 IGG +SHE+ + ADTGE ++ FC++ F E D D +E + + T Sbjct: 215 SIGGSMSHEYHLPADTGEDELWFCNR--CGFGANKELGDID--------IEHCS--HCGT 262 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 + N S +GIEVGH FY GTKYS +A + ++ + +MG YG+ Sbjct: 263 T-------------NSLESRQGIEVGHAFYLGTKYSKVFNADYSDSNNQTRTTEMGCYGL 309 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK------AHDQVCRDACEKIYARLS 373 G R++AA IE S I WP +AP++I +I K + ++I + L Sbjct: 310 GVTRILAAAIEVSSTDNEIRWPHLLAPYQIYIIPSKDGSKEAGAQPIAVGLYDQIVSHLP 369 Query: 374 KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSK 409 + ++ DD IG + A LG+P +++G K Sbjct: 370 HLKHEIILDDRNHMTIGKRMKEAKSLGYPFVIVIGKK 406 >gi|301300275|ref|ZP_07206484.1| proline--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852116|gb|EFK79791.1| proline--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 570 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 147/224 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DAE+ SH+LMLR G I Q + G+Y++LPL + + + IIREE Sbjct: 1 MKQSQMLIPTLKEIPSDAEVVSHQLMLRGGYIKQITAGMYAYLPLAYRVMKKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A+EM VP + A+LW ESGRY++YG + +L DR+++ I GPTHEE T I R Sbjct: 61 MDRIDAVEMLVPAVVPAELWQESGRYETYGPTLFKLKDRHERDFILGPTHEETFTTIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ+K+RDE RPRFG++R REFLM D YSF + + +N + Sbjct: 121 AIKSYKKLPLYLYQIQMKYRDENRPRFGLLRGREFLMLDGYSFHVDDASMEKVFNDTDKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GL + A+SG +GG+ S EF +A+ GE + S Sbjct: 181 YQRIFERCGLDFRGIIADSGAMGGNRSKEFQAIAEVGEDTIAYS 224 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 97/165 (58%), Gaps = 1/165 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GT+YS + A +G+ ++MG YGIG R+++A++E +D GI Sbjct: 402 TRGIEIGHIFQLGTRYSESLGADVLDENGRQVPMRMGCYGIGVSRLLSAIVEQHNDENGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +APF I ++ + + R+ EK+ A L G V DD E+ G +FA +DL+ Sbjct: 462 AWPREIAPFDIHVVPVNVKNDTQRELSEKVTAMLEDAGYQVLVDDRKERAGVKFADSDLI 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P+++ VG K + VEIK R G + ++ LEE++N F+ Sbjct: 522 GLPIRITVGKK-ADEGIVEIKLRQNGEKIEVKLEELLNSVKILFN 565 >gi|323481345|gb|ADX80784.1| prolyl-tRNA synthetase [Enterococcus faecalis 62] Length = 572 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 105/226 (46%), Positives = 145/226 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + AI+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKAIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 3/168 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ V A +GIE+GHIF GT+YS M AT +G++ V MG YGIG R+++ Sbjct: 391 DPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E + D +GI WP +APF + ++ + D+ +++ A +++ G +V DD E Sbjct: 451 AIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ Sbjct: 511 RAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEEL 557 >gi|116075299|ref|ZP_01472559.1| prolyl-tRNA synthetase [Synechococcus sp. RS9916] gi|116067496|gb|EAU73250.1| prolyl-tRNA synthetase [Synechococcus sp. RS9916] Length = 600 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 110/229 (48%), Positives = 151/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEIASH+L+LR G I + GIY++LPL + L ++AI+++E Sbjct: 1 MRVSRLMLVTLRDVPADAEIASHQLLLRGGYIRRVGSGIYAYLPLMWRVLRKISAIVQQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA+E +P LQ A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 MDATGALETLLPQLQPAELWERSGRWQGYTAGEGIMFHLEDRQGRQVGLGPTHEEVVTSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + Y +M Sbjct: 121 AGELLRSYRQLPVTVYQIQNKFRDEIRPRFGLMRGREFIMKDAYSFHADEQDLGRCYGEM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 ++Y RIF R GL+++ + A+SG IGG S EF+V A+ GE + S+D Sbjct: 181 DLAYRRIFERCGLQAVAVEADSGAIGGAASQEFMVTAEAGEDLILTSED 229 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 4/166 (2%) Query: 261 DVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N + D P+ V+ RGIEVGHIF G KYS M ATF A+G MG Y Sbjct: 408 DLRNAQAGDRCLQSPDQTLVARRGIEVGHIFQLGRKYSQAMDATFTTAEGGQDAFWMGCY 467 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+ A +E HD GI WP ++APF++ ++ D E++Y+ L G Sbjct: 468 GIGVSRLAQAAVEQHHDKAGICWPLAIAPFQVVIVVANMQDDTQLQLGEQLYSTLQASGI 527 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 DV DD E+ G +F ADL+G P +++VG + ++ +VE+ R T Sbjct: 528 DVLLDDRSERAGVKFKDADLIGIPWRLVVG-RDAANGQVELVERAT 572 >gi|270290317|ref|ZP_06196542.1| prolyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|270281098|gb|EFA26931.1| prolyl-tRNA synthetase [Pediococcus acidilactici 7_4] Length = 571 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 147/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P ++E P DAE+ SHK+MLR G I Q S G+Y++LP+ K ++ + IIREE Sbjct: 1 MKQSKILIPTVKEVPNDAEVLSHKMMLRAGYIRQISAGMYAYLPMAYKVMEKIKRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+EM P + A+LW +SGRY++YG+E+ + +R+D+ I GPTHEE MT + R Sbjct: 61 MTAIDAVEMLTPAVLPAELWKKSGRYETYGQELYKFKNRHDRDFILGPTHEETMTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ+K+RDE RPR+G++R REFLM DAYSF E S+ + Sbjct: 121 EVKSYKKLPLTLYQIQMKYRDEDRPRYGLLRGREFLMSDAYSFHADEETLDESFRAFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R GLK + ++G +GG S EF +A GE + S++ Sbjct: 181 YQNIFDRCGLKYREIVGDAGAMGGHDSKEFSAIASIGEDTIAYSEE 226 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 93/157 (59%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIE+GHIF GTKYS + AT +G+ V MG YGIG R+++AV E D G++ Sbjct: 406 KGIEIGHIFKIGTKYSKALDATVLDQNGRAIPVIMGCYGIGVSRLLSAVSEQLADENGLV 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++APF + +I + A + ++I L G DV DD E+ G +FA +DL+G Sbjct: 466 WPKNIAPFDVHVIPVNAKNDEQMQVADQINTELVAAGYDVLIDDRKERAGVKFADSDLIG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 PL+V VG K S+ VE+K R TG ++ L E+ N Sbjct: 526 IPLRVTVGKK-ASEGIVEVKLRQTGETVEVKLAELKN 561 >gi|304384864|ref|ZP_07367210.1| proline--tRNA ligase [Pediococcus acidilactici DSM 20284] gi|304329058|gb|EFL96278.1| proline--tRNA ligase [Pediococcus acidilactici DSM 20284] Length = 571 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 147/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P ++E P DAE+ SHK+MLR G I Q S G+Y++LP+ K ++ + IIREE Sbjct: 1 MKQSKILIPTVKEVPNDAEVLSHKMMLRAGYIRQISAGMYAYLPMAYKVMEKIKRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+EM P + A+LW +SGRY++YG+E+ + +R+D+ I GPTHEE MT + R Sbjct: 61 MTAIDAVEMLTPAVLPAELWKKSGRYETYGQELYKFKNRHDRDFILGPTHEETMTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ+K+RDE RPR+G++R REFLM DAYSF E S+ + Sbjct: 121 EVKSYKKLPLTLYQIQMKYRDEDRPRYGLLRGREFLMSDAYSFHADEETLDESFRAFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R GLK + ++G +GG S EF +A GE + S++ Sbjct: 181 YQNIFDRCGLKYREIVGDAGAMGGHDSKEFSAIASIGEDTIAYSEE 226 Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 93/157 (59%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIE+GHIF GTKYS + AT +G+ V MG YGIG R+++AV E D G++ Sbjct: 406 KGIEIGHIFKIGTKYSKALDATVLDQNGRAIPVIMGCYGIGVSRLLSAVSEQLADENGLV 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++APF + +I + A + ++I L G DV DD E+ G +FA +DL+G Sbjct: 466 WPKNIAPFDVHVIPVNAKNDEQMQVADQINTELVAAGYDVLIDDRKERAGVKFADSDLIG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 PL+V VG K S+ VE+K R TG ++ L E+ N Sbjct: 526 IPLRVTVGKK-ASEGIVEVKLRQTGETVEVKLAELKN 561 >gi|227890630|ref|ZP_04008435.1| prolyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|227867568|gb|EEJ74989.1| prolyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|300214372|gb|ADJ78788.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [Lactobacillus salivarius CECT 5713] Length = 571 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 147/224 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DAE+ SH+LMLR G I Q + G+Y++LPL + + + IIREE Sbjct: 1 MKQSQMLIPTLKEIPSDAEVVSHQLMLRGGYIKQITAGMYAYLPLAYRVMKKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A+EM VP + A+LW ESGRY++YG + +L DR+++ I GPTHEE T I R Sbjct: 61 MDRIDAVEMLVPAVVPAELWQESGRYETYGPTLFKLKDRHERDFILGPTHEETFTTIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ+K+RDE RPRFG++R REFLM D YSF + + +N + Sbjct: 121 AIKSYKKLPLYLYQIQMKYRDENRPRFGLLRGREFLMLDGYSFHVDDASMEKVFNDTDKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GL + A+SG +GG+ S EF +A+ GE + S Sbjct: 181 YQRIFERCGLDFRGIIADSGAMGGNRSKEFQAIAEVGEDTIAYS 224 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 97/165 (58%), Gaps = 1/165 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GT+YS + A +G+ ++MG YGIG R+++A++E +D GI Sbjct: 403 TRGIEIGHIFQLGTRYSESLGADVLDENGRQVPMRMGCYGIGVSRLLSAIVEQHNDENGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +APF I ++ + + R+ EK+ A L G V DD E+ G +FA +DL+ Sbjct: 463 AWPREIAPFDIHVVPVNVKNDTQRELSEKVTAMLEDAGYQVLVDDRKERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P+++ VG K + VEIK R G + ++ LEE++N F+ Sbjct: 523 GLPIRITVGKK-ADEGIVEIKLRQNGEKIEVKLEELLNSVKILFN 566 >gi|284925806|gb|ADC28158.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902] Length = 569 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 112/279 (40%), Positives = 166/279 (59%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + S+ + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSYIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ + N + Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICEN-CDY---AANVEAA 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 E+ A YA+ N K DSL + +++A Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA 276 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 1/161 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A E+SHD Sbjct: 402 KLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVATEASHD 461 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + Sbjct: 462 EKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMND 521 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L+GFP ++VG K + +++E+ R I+E + +E++ Sbjct: 522 FELMGFPYALVVG-KGLEKNEIELIQREGLIKELIKTDELM 561 >gi|90961542|ref|YP_535458.1| prolyl-tRNA synthetase [Lactobacillus salivarius UCC118] gi|114152204|sp|Q1WUG0|SYP_LACS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|90820736|gb|ABD99375.1| Prolyl-tRNA synthetase [Lactobacillus salivarius UCC118] Length = 571 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 147/224 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DAE+ SH+LMLR G I Q + G+Y++LPL + + + IIREE Sbjct: 1 MKQSQMLIPTLKEIPSDAEVVSHQLMLRGGYIKQITAGMYAYLPLAYRVMKKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A+EM VP + A+LW ESGRY++YG + +L DR+++ I GPTHEE T I R Sbjct: 61 MDRIDAVEMLVPAVVPAELWQESGRYETYGPTLFKLKDRHERDFILGPTHEETFTTIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ+K+RDE RPRFG++R REFLM D YSF + + +N + Sbjct: 121 AIKSYKKLPLYLYQIQMKYRDENRPRFGLLRGREFLMLDGYSFHVDDASMEKVFNDTDKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GL + A+SG +GG+ S EF +A+ GE + S Sbjct: 181 YQRIFERCGLDFRGIIADSGAMGGNRSKEFQAIAEVGEDTIAYS 224 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 97/165 (58%), Gaps = 1/165 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GT+YS + A +G+ ++MG YGIG R+++A++E +D GI Sbjct: 403 TRGIEIGHIFQLGTRYSESLGADVLDENGRQVPMRMGCYGIGVSRLLSAIVEQHNDENGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +APF I ++ + + R+ EK+ A L G V DD E+ G +FA +DL+ Sbjct: 463 AWPREIAPFDIHVVPVNVKNDTQRELSEKVTAMLEDAGYQVLVDDRKERAGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P+++ VG K + VEIK R G + ++ LEE++N F+ Sbjct: 523 GLPIRITVGKK-ADEGIVEIKLRQNGEKIEVKLEELLNSVKILFN 566 >gi|72161176|ref|YP_288833.1| prolyl-tRNA synthetase [Thermobifida fusca YX] gi|114152272|sp|Q47RV7|SYP_THEFY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71914908|gb|AAZ54810.1| prolyl-tRNA synthetase, bacterial [Thermobifida fusca YX] Length = 582 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 105/218 (48%), Positives = 145/218 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DAE+ SHKL++R G + + + G+YSWLPLG+ L+NV A++REE Sbjct: 3 LRMSNLFLRTLREDPADAEVPSHKLLVRGGFVRRTAPGVYSWLPLGKIVLENVAAVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P L + + +GR+ YG + RL DR + GPTHEE+ T + + Sbjct: 63 MNRIGAQEVLLPALLPREYYEATGRWTEYGDTLFRLKDRKGADYLLGPTHEELFTLLVKG 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P YQIQ KFRDE RPR G++R REF MKD+YSFDL EG + SY + Sbjct: 123 EYTSYKDYPVILYQIQEKFRDEARPRAGILRGREFHMKDSYSFDLDDEGLQRSYEAHRQA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y+RIF RLGL+ + ++A SG +GG S EF+ +A TGE Sbjct: 183 YIRIFDRLGLEYVIVKATSGAMGGSASEEFLAIAPTGE 220 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/171 (40%), Positives = 100/171 (58%), Gaps = 6/171 (3%) Query: 269 DSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ K +ARGIE+GH+F G KY+ S G DGK + MGSYGIG RVVA Sbjct: 407 DPAPDGKGTLYTARGIEIGHVFQLGRKYTDAFSLDALGPDGKPVRITMGSYGIGVSRVVA 466 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MG 385 A++E SHD +GIIWP VAP + ++ DQV + +I L G V DD G Sbjct: 467 AIVEQSHDERGIIWPREVAPADVHVVGTGKGDQV--EVALRISQELVDRGVRVLVDDRKG 524 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G +F A+LLG P +IVG + +++ VE++ R +G R ++S++ V++ Sbjct: 525 VSPGVKFTDAELLGVPTVLIVG-RGLANGVVELRDRASGDRSEVSVDTVVD 574 >gi|317495744|ref|ZP_07954109.1| prolyl-tRNA synthetase [Gemella moribillum M424] gi|316914197|gb|EFV35678.1| prolyl-tRNA synthetase [Gemella moribillum M424] Length = 566 Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 108/256 (42%), Positives = 156/256 (60%), Gaps = 11/256 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P +E P AE SHKL+++ GM+ Q S G+Y++LPL K + N+ +IREE Sbjct: 1 MRQSRTFIPTTREVPSSAEAISHKLLIKAGMVKQVSAGVYTYLPLATKVIQNIERVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E+ +P LQS D W ESGR+ G E++RL DR PT EE++ + Sbjct: 61 HDKIGAVELLMPLLQSEDYWKESGRWYKMGDELMRLKDRKGAGYALSPTAEEIICQTVNN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPR G++R +EF+MKD YSF +PE + +Y + + Sbjct: 121 MLTSYKQLPMNLYQIQTKFRDEMRPRLGLLRGKEFIMKDGYSFHDSPESLRETYLDYYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R LK ++A+SG IGG +HEF LA+ GE D +E +D+ Sbjct: 181 YSNIFDRFELKYRAVKADSGNIGGSYTHEFQALAEIGE----------DTIAYTEESDYA 230 Query: 241 DIISLNSIVEQ-WTAP 255 I ++VEQ +T P Sbjct: 231 ANIETAAVVEQNYTIP 246 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/158 (44%), Positives = 101/158 (63%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG +F G YS M+ T+ A+G+ ++ MG YGIG RV++A+IE +D KGI Sbjct: 403 AKGIEVGQVFELGKGYSEAMNITYLDANGRANHFYMGCYGIGVSRVISAIIEQHNDEKGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP VAPF++ L+ + Q + EK+YA L+ G V +DD E+ G +F ADL+ Sbjct: 463 IWPKEVAPFQVHLVCVDVKKQEQLELSEKLYAELTSAGYTVLYDDRAERAGVKFNDADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G PLQV+VG K ++ VE+K R T + D S+ EV++ Sbjct: 523 GIPLQVVVGKK-ATEGIVEVKERKTLEKVDTSITEVLS 559 >gi|241888520|ref|ZP_04775828.1| prolyl-tRNA synthetase [Gemella haemolysans ATCC 10379] gi|241864787|gb|EER69161.1| prolyl-tRNA synthetase [Gemella haemolysans ATCC 10379] Length = 572 Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 116/315 (36%), Positives = 179/315 (56%), Gaps = 20/315 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R+SK F+P +E P AE SHKL+++ GM+ Q S G+Y++LPL + + + +IREE Sbjct: 7 VRQSKTFIPTTREVPSSAEAISHKLLIKAGMVKQVSAGVYTYLPLATRVIQKIEKVIREE 66 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ +P LQS + W +SGR+D G+E++R+ DR PT EE+++ + Sbjct: 67 HSKIGAAELLMPILQSDEYWKKSGRWDKMGEELIRVTDRKKAGYALSPTAEEIVSQTVNN 126 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPR G++R +EF+MKDAYSF +PE + +Y + + Sbjct: 127 MVTSYKQLPMNLYQIQTKFRDEIRPRLGLLRCKEFIMKDAYSFHDSPESLRETYKDYYQA 186 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R LK ++A+SG IGG +HEF LA+ GE D + +E +D+ Sbjct: 187 YSSIFDRFELKYRAVQADSGNIGGSYTHEFQALAEVGE----------DTIVYTEESDYS 236 Query: 241 DIISLNSIVEQ-WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I ++VEQ +T P T E+ P+ + + + G + + M Sbjct: 237 ANIETAAVVEQNYTMP---TGFEKKERSLLETPDQQSIDDVAA------FCGVEVNRAMK 287 Query: 300 ATFKGADGKDHYVQM 314 A ADG+ + V M Sbjct: 288 ALALKADGEFYLVLM 302 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/159 (42%), Positives = 101/159 (63%), Gaps = 5/159 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG +F G YS M T+ A+G+ ++ MG YGIG R ++A+IE +D KGI Sbjct: 409 AKGIEVGQVFELGKGYSEAMDVTYLDANGRANHFYMGCYGIGVTRCISAIIEQHNDEKGI 468 Query: 339 IWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP VAP+++ L +++K DQV +++YA+L+ G +V +DD E+ G +F AD Sbjct: 469 IWPKEVAPYQVHLVCVDVKKEDQV--KLSDELYAQLTAAGYEVLYDDRAERAGVKFNDAD 526 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G PLQV+VG K + VE+K R T + D + +V+ Sbjct: 527 LIGIPLQVVVGKK-AGEGIVEVKERQTLEKVDTQVVDVL 564 >gi|330718639|ref|ZP_08313239.1| prolyl-tRNA synthetase [Leuconostoc fallax KCTC 3537] Length = 572 Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 107/230 (46%), Positives = 146/230 (63%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH L+L+ G I + G++S+LPL Q+ L+ + AI+REE Sbjct: 1 MKQSKLLMPTLREVPADAEVRSHALLLKAGYIRPVAAGMFSYLPLAQRVLNKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A EMSVP + A+LW ESGRY +YG + + +R ++ I GPTHEE T + R Sbjct: 61 MAKIDANEMSVPEILPAELWQESGRYATYGPALYKFKNRQNRDFILGPTHEETFTQLMRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG++R+REF+MKDAYSF EG +Y M + Sbjct: 121 DIKSYKKLPLLVYQIQAKFRDENRPRFGLLRTREFIMKDAYSFSADQEGLDDAYRAMEQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y IF R+GL + ++G +GG S EF AD GE + D D+ Sbjct: 181 YTNIFDRVGLTYRAIVGDAGAMGGSDSKEFSAPADAGE-DIIAYSDATDY 229 Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 92/162 (56%), Gaps = 1/162 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K V +GIE+GHIF GT+YS + A +G+ + MGSYGIG R+++A+ E D Sbjct: 402 KLVFTKGIEIGHIFKLGTRYSEALGAQVLDKNGRQTDMIMGSYGIGISRLLSAISEQKAD 461 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 G++WP SVAPF + ++ I D ++ + G +V DD E+ G +FA Sbjct: 462 EDGLVWPTSVAPFDVHIVPINLKDTEQARVTRQLESEFLAQGLEVLVDDRKERAGVKFAD 521 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 ADL+G P+++ VG K D VE+K R + +M + EV++ Sbjct: 522 ADLIGLPIRITVGKKAEEDI-VEVKVRASNTNIEMRVSEVVD 562 >gi|15674109|ref|NP_268284.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|81856528|sp|Q9CDT4|SYP_LACLA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|12725184|gb|AAK06225.1|AE006441_3 prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] Length = 616 Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 101/215 (46%), Positives = 144/215 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L++R G + Q S GIY++LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLMRAGYVRQVSAGIYAYLPLANRVLEKLKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ P+L +ADLW ESGRYD+YG+++ +L +R++ I GPTHEE MT + R Sbjct: 61 FDEIGAVELLAPSLLTADLWRESGRYDTYGEDLYKLKNRDNSDFILGPTHEETMTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPR+G++R REFLMKD YS+ + +YN + Sbjct: 121 EITSYKKLPLNVYQIAPKFRDEKRPRYGLLRGREFLMKDGYSYHADQDSLDETYNDYKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 Y +IF R GL P+ A++G +GG S EFI + D Sbjct: 181 YEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITD 215 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 96/171 (56%), Gaps = 14/171 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+Y+ M+A A+G+ + MG YGIG R+++A++E Sbjct: 440 ARGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSRLLSAILEQFARIYVE 499 Query: 332 ---SHDGK---GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + K I +P +APF I L+ + D+ + ++ +L G V DD Sbjct: 500 KTPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+ G +FA +DL+G P++V +G K ++ VE+K R TG +++ +E++N Sbjct: 560 ERAGVKFADSDLIGLPVRVTIGKK-AAEGVVEVKIRATGEVVEINKDELVN 609 >gi|326407711|gb|ADZ64782.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 616 Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 101/215 (46%), Positives = 144/215 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L++R G + Q S GIY++LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLMRAGYVRQVSAGIYAYLPLANRVLEKLKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ P+L +ADLW ESGRYD+YG+++ +L +R++ I GPTHEE MT + R Sbjct: 61 FDEIGAVELLAPSLLTADLWRESGRYDTYGEDLYKLKNRDNSDFILGPTHEETMTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPR+G++R REFLMKD YS+ + +YN + Sbjct: 121 EITSYKKLPLNVYQIAPKFRDEKRPRYGLLRGREFLMKDGYSYHADQDSLDETYNDYKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 Y +IF R GL P+ A++G +GG S EFI + D Sbjct: 181 YEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITD 215 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 96/171 (56%), Gaps = 14/171 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+Y+ M+A A+G+ + MG YGIG R+++A++E Sbjct: 440 ARGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSRLLSAILEQFARIYVE 499 Query: 332 ---SHDGK---GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + K I +P +APF I L+ + D+ + ++ +L G V DD Sbjct: 500 KTPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+ G +FA +DL+G P++V +G K ++ VE+K R TG +++ +E++N Sbjct: 560 ERAGVKFADSDLIGLPVRVTIGKK-AAEGVVEVKIRATGEVVEINKDELVN 609 >gi|281492788|ref|YP_003354768.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|281376440|gb|ADA65926.1| Prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] Length = 616 Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 101/215 (46%), Positives = 144/215 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L++R G + Q S GIY++LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLMRAGYVRQVSAGIYAYLPLANRVLEKLKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ P+L +ADLW ESGRYD+YG+++ +L +R++ I GPTHEE MT + R Sbjct: 61 FDEIGAVELLAPSLLTADLWRESGRYDTYGEDLYKLKNRDNSDFILGPTHEETMTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPR+G++R REFLMKD YS+ + +YN + Sbjct: 121 EITSYKKLPLNVYQIAPKFRDEKRPRYGLLRGREFLMKDGYSYHADQDSLDETYNDYKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 Y +IF R GL P+ A++G +GG S EFI + D Sbjct: 181 YEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITD 215 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 96/171 (56%), Gaps = 14/171 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+Y+ M+A A+G+ + MG YGIG R+++A++E Sbjct: 440 ARGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSRLLSAILEQFARIYVE 499 Query: 332 ---SHDGK---GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + K I +P +APF I L+ + D+ + ++ +L G V DD Sbjct: 500 KTPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+ G +FA +DL+G P++V +G K ++ VE+K R TG +++ +E++N Sbjct: 560 ERAGVKFADSDLIGLPVRVTIGKK-AAEGVVEVKIRATGEVVEINKDELVN 609 >gi|284929738|ref|YP_003422260.1| prolyl-tRNA synthetase, family II [cyanobacterium UCYN-A] gi|284810182|gb|ADB95879.1| prolyl-tRNA synthetase, family II [cyanobacterium UCYN-A] Length = 606 Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 111/229 (48%), Positives = 148/229 (64%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK L+E+P +AEI SHKL+LR+ I + S GIYS+LPL + L + IIREE Sbjct: 1 MQLSKVLFVTLREDPAEAEIISHKLLLRSCYIRRVSSGIYSYLPLMWRVLRKTSQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N G E +P LQ +DLW ESGR+ +Y + M L DR ++ + GPTHEEV+T I Sbjct: 61 MNSIGGQECLLPQLQISDLWEESGRWKTYTEAEGIMFSLIDRQNRELALGPTHEEVVTSI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R + SY+ +P YQIQ KFRDE+RPRFG+MRSREF+MKDAYSFD E + +Y+ + Sbjct: 121 VRDMVVSYKQMPLNLYQIQTKFRDEIRPRFGLMRSREFIMKDAYSFDENLENLQKNYDMV 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y I R GL + A+SG IGG S EF+VL D GE ++ ++D Sbjct: 181 SQAYCNILKRCGLSFKVVEADSGTIGGLASQEFMVLTDVGEDEILYTED 229 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 8/189 (4%) Query: 261 DVHNEKLFDSLPENKR---VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 DV K D + EN + +S +G+EVGH+F GTKYS M ATF +G++ + MG Y Sbjct: 413 DVRRAKEGDKISENSQERLISKKGVEVGHVFQLGTKYSKKMKATFTDKNGEEKPIVMGCY 472 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKV 375 GIG R+V + +E +HD GIIWP ++AP+ +I N+K Q+ + EKIY L+ + Sbjct: 473 GIGVSRLVQSAVEQNHDKHGIIWPLAIAPYHAIIIVPNVKEKQQM--EIAEKIYYDLNSI 530 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + DD E+IGS+F A+L+G P Q++ G + + KVE+ R T +++ +EE+ Sbjct: 531 GIETILDDRTERIGSKFKDAELIGIPYQIVTG-RTLKFGKVEVVDRKTKNSQEVIIEELP 589 Query: 436 NYASHRFSN 444 F N Sbjct: 590 KLFHEFFKN 598 >gi|312374940|gb|EFR22399.1| hypothetical protein AND_15306 [Anopheles darlingi] Length = 467 Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 137/439 (31%), Positives = 225/439 (51%), Gaps = 40/439 (9%) Query: 25 LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESG 84 LML G++ Q G LP+ Q+A+ +I A +++P L A+LW +SG Sbjct: 35 LMLEQGLMRQAGNGTLHVLPVLQRAVQKAIDLIDRHMQSVDAQRITLPVLTPAELWRQSG 94 Query: 85 RYDSYG--KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPFTFYQIQLKFRD 141 R + E+L+ DR+ K I GPTHEE +T + + SYR P YQI KFRD Sbjct: 95 RLNESDPPTELLQTKDRHGKMQILGPTHEESITALMAAIAPVSYRQFPLRLYQISTKFRD 154 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 E++PRFG+MR++EFLMKD Y+FD+ P + +Y + +Y R+F +G+ + + +SG Sbjct: 155 EMKPRFGLMRAKEFLMKDLYTFDVDPHRCRQTYETVNAAYGRLFSEIGVPFVKVAGDSGT 214 Query: 202 IGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS 260 +GG LSHE+ ++ GE ++ C + + + + I +L A+TS Sbjct: 215 MGGSLSHEYHFPSEVGEDELLQCDQ----CGVRTNSEHLQKICALCDRCGAGKESTASTS 270 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 + RGIEVGH F +Y+ P+ A+ +GK +QMG YGIG Sbjct: 271 SFERQ--------------RGIEVGHAFILEDRYTKPLGASCLQPNGKPTPLQMGCYGIG 316 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA---HDQVCRDACEKIYARLSKV-- 375 R++AA +E K + WP ++AP+++ ++ KA + + +++Y L Sbjct: 317 VTRLIAASLEVLSSEKELRWPLALAPYRVCIVTPKAGSKEESLVSPWVDRLYNLLHTAVP 376 Query: 376 GC--DVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDS---KVEIKHRLTGIREDM 429 GC DV DD + IG + A +G+PL V++G+K + + + E+ + G +D+ Sbjct: 377 GCQGDVIVDDRNQLTIGKRVLDARRMGYPLIVVIGAKAANPAGSERFELHNLHAGTEQDL 436 Query: 430 S-------LEEVINYASHR 441 S + +V++ HR Sbjct: 437 SYTDLAAAIGDVLSTTHHR 455 >gi|332295560|ref|YP_004437483.1| Prolyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] gi|332178663|gb|AEE14352.1| Prolyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] Length = 572 Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 148/225 (65%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F L+E P DAE SH L+LR G I + S GIY++LPL ++ L + I+REE Sbjct: 1 MKLSKLFFKTLKEVPGDAEAISHVLLLRAGYIRRLSSGIYTYLPLAKRVLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ +P LQ ++W SGR+ YG E++R DR+DK GPTHEEV+TD+ Sbjct: 61 MININSQELLLPALQPREIWEISGRWKKYGLELMRFKDRHDKDYALGPTHEEVITDLINR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP + +QIQ KFRDE+RPRFG+MR+REF+MKDAYSF E +Y MF + Sbjct: 121 EVNSYKQLPISVFQIQTKFRDEIRPRFGLMRTREFIMKDAYSFHRNEEDLDKTYWDMFHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCS 224 Y +I R+GL + A+SG IGG +SHEF+VL GE ++ +CS Sbjct: 181 YEKILTRMGLNFKSVEADSGAIGGSVSHEFMVLTPFGEDKILYCS 225 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 10/192 (5%) Query: 261 DVHNEKLFD----------SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 D + +K+FD S ++ + + G E GH+F GTKYS PM A FK DGK+ Sbjct: 377 DFYTDKIFDLRISKAGEFCSRCGSRLLESTGSEAGHVFKLGTKYSEPMKAYFKDEDGKEK 436 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 +MG YGIG R++A V+E HD GIIWP+S++P+++ +I +D+ E I+ Sbjct: 437 PFEMGCYGIGISRLLAIVVEQHHDEFGIIWPNSISPYQVIIIPTNINDKNQLTTSEMIFY 496 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L + G V +DD E+ G +F ADLLG P+++I+GS F VEIK R G + Sbjct: 497 ELKERGISVLFDDRDERAGVKFKDADLLGIPIKIIIGSHFSKSGLVEIKVRRDGSSNLVP 556 Query: 431 LEEVINYASHRF 442 +E Y S + Sbjct: 557 PDEASVYVSLKL 568 >gi|126659940|ref|ZP_01731064.1| prolyl-tRNA synthetase [Cyanothece sp. CCY0110] gi|126618804|gb|EAZ89549.1| prolyl-tRNA synthetase [Cyanothece sp. CCY0110] Length = 598 Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 108/219 (49%), Positives = 146/219 (66%), Gaps = 3/219 (1%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE N GA E Sbjct: 6 LREDPAEAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNAAGAQECL 65 Query: 71 VPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 +P LQ ++LW ESGR+++Y K M L DR ++ + GPTHEEV+T + + I+SYR Sbjct: 66 LPQLQPSELWKESGRWETYTKAEGIMFSLIDRQERELGLGPTHEEVITTVAKDMIRSYRQ 125 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF+ + SY+ M +Y I R Sbjct: 126 LPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFNENEASLQKSYDAMDQAYRNIISR 185 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 GL + A+SG IGG S EF++LA+ GE +V ++D Sbjct: 186 CGLAYRAVEADSGAIGGSASQEFMILAEAGEDEVLYTED 224 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/146 (43%), Positives = 92/146 (63%), Gaps = 5/146 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIEVGHIF GTKYS M ATF +G++ + MG YG+G R+ A +E S+D G Sbjct: 428 SARGIEVGHIFQLGTKYSEAMGATFTDENGEEKPIVMGCYGVGVSRLAQAAVEQSYDKDG 487 Query: 338 IIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 IIWP ++AP+ + +I NIK +Q+ + E +Y L+K+G + DD E+ G +F A Sbjct: 488 IIWPVAIAPYHVIIIVPNIKDKNQI--EVAENLYNELNKIGIETMLDDRDERAGVKFKDA 545 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHR 421 DL+G P +V+ G + + KVE+ R Sbjct: 546 DLIGIPYRVVTG-RSLKAGKVEVVTR 570 >gi|57167588|ref|ZP_00366728.1| prolyl-tRNA synthetase [Campylobacter coli RM2228] gi|57020710|gb|EAL57374.1| prolyl-tRNA synthetase [Campylobacter coli RM2228] Length = 569 Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 113/285 (39%), Positives = 168/285 (58%), Gaps = 16/285 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MKFSKLYAPSLKEAPKDATLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIRTIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFVTPATLWQESGRYNVFGKELLRFKDRKENDFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E ++ M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLTREFDLMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y +I R+GL+ + A+SG IGG S EF+VLA GE + + EN D+ Sbjct: 182 YSQILQRMGLEFRAVDADSGAIGGSGSKEFMVLAKNGEDDI----------LICENCDYA 231 Query: 240 ---DDIISLNSIVEQW--TAPYAATSDVHNEKLFDSLPENKRVSA 279 + I N E+ A YA+ + K ++L + +++A Sbjct: 232 ANVEAAIRANKTCEEERPEANYASKFHTPDVKTIEALAQFFKINA 276 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 1/159 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG Sbjct: 406 SKGIEVGHIFKLGQKYSKAMNANFLDENGKSKPFYMGCYGIGVSRLLAVAIEANHDEKGC 465 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IW ++APF + +I D+ + K+Y LS G +V DD E+ G + +L+ Sbjct: 466 IWNKTLAPFTLEIIISNIKDEKSLEFATKLYEDLSNAGIEVLLDDRNERFGVKMNDFELM 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 GFP ++VG D ++E R T ++ +S +E ++ Sbjct: 526 GFPYALVVGKGLEKD-ELEFIDRKTLEKKIISSKEAFDF 563 >gi|331701343|ref|YP_004398302.1| Prolyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] gi|329128686|gb|AEB73239.1| Prolyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] Length = 569 Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 104/224 (46%), Positives = 145/224 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P+ AE SH++++R G I Q S G+Y++LPL + L+ + IIR+E Sbjct: 1 MKQSQMLIPTLKETPKGAEALSHQMLVRGGYIRQISAGMYAYLPLAYRVLNKIETIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +T A EM +P + ADLW ESGRYD+YG E+ + +R++ I GPTHEE T + R Sbjct: 61 MEKTSAHEMLMPDILPADLWKESGRYDTYGPELFKFKNRHETDFILGPTHEETFTALIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPR+G++RSREF+MKDAYSF E +YN M + Sbjct: 121 SIKSYKQLPLVLYQIQNKYRDENRPRYGLLRSREFIMKDAYSFATNDEDLDKTYNAMEQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R+GLK + + G +GG S EF +A GE + S Sbjct: 181 YRNIFDRIGLKYKVIIGDGGAMGGSDSKEFSAMAAVGEDTIVYS 224 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 96/165 (58%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF GT+YS + A +G+ V MGSYGIG R+++A+ E + D G++ Sbjct: 404 RGIEIGHIFKLGTRYSKSLKANVLDENGRAVPVIMGSYGIGVSRLLSAISEQNADENGLV 463 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP +VAPF + +I I A V D +I A+L+ V DD E+ G +FA +DL+G Sbjct: 464 WPKAVAPFDVHVIPINAKKAVQMDLAHQIEAQLTADQLQVLVDDRKERAGVKFADSDLMG 523 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 PL+V +G K + VEIK R TG ++++ E+ + N Sbjct: 524 IPLRVTIGKK-AEEGIVEIKIRKTGETVEVNVTELSDTIKKMLKN 567 >gi|194477323|ref|YP_002049502.1| prolyl-tRNA synthetase [Paulinella chromatophora] gi|171192330|gb|ACB43292.1| prolyl-tRNA synthetase [Paulinella chromatophora] Length = 604 Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 111/229 (48%), Positives = 151/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S L L+++P +AE+ SHKL+LR G I + + GIY++LPL + L +++ +REE Sbjct: 1 MRVSHLMLVTLRDDPAEAEVISHKLLLRAGYIRRVTIGIYAYLPLLWRVLKKISSCVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 GAIE+ +P LQ AD+W S R+ Y + M L DR + + GPTHEEV+T++ Sbjct: 61 MTSAGAIELLMPQLQPADIWQLSKRWAGYTQGEGIMFNLKDRQGRELALGPTHEEVVTNL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + IKSYR LP T YQIQ KFRDE+RPRFG+MRSREF+MKDAYSF + K SY++M Sbjct: 121 VDNLIKSYRQLPCTLYQIQTKFRDEIRPRFGLMRSREFVMKDAYSFHSSEIDLKVSYDRM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + Y IF R GL + + A+SG IGG S EF+V A+ GE + S+D Sbjct: 181 DLGYRNIFRRCGLNVVAVEADSGSIGGAASQEFMVTAEAGEDLILISED 229 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 8/184 (4%) Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A A +HN +L EN RGIEVGHIF G KYS+ ++A + G Sbjct: 414 AAQANDQCIHNP--IYTLTEN-----RGIEVGHIFRLGHKYSIALNANYTNEIGNQEPFW 466 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R+ A +E HD KGI WP S+APF++ ++ + D++ R E +Y+ + Sbjct: 467 MGCYGIGISRLSQAAVEQHHDQKGICWPLSIAPFEVIIVIVSIQDEIQRTLGEALYSIMK 526 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 DV DD ++ G +F ADL+G P Q+++G + ++++E+ R+T E + Sbjct: 527 AARVDVLIDDRQDRAGVKFKDADLIGIPWQIVIGRGAI-NNQIELVERITSRSEQLDAGY 585 Query: 434 VINY 437 ++ Y Sbjct: 586 LVKY 589 >gi|116495061|ref|YP_806795.1| prolyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|122263522|sp|Q038L9|SYP_LACC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116105211|gb|ABJ70353.1| Prolyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|327382602|gb|AEA54078.1| Prolyl-tRNA synthetase [Lactobacillus casei LC2W] gi|327385800|gb|AEA57274.1| Prolyl-tRNA synthetase [Lactobacillus casei BD-II] Length = 575 Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 146/224 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ F+P +E P AE SHK+MLR+G + Q G+Y++LPL ++ L + AII +E Sbjct: 1 MKQSRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQIQAGVYAYLPLAERVLARIEAIIDDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A++M +P L A+LW ESGRY++YG + +L +R D+ MI GPTHEE TD+ R+ Sbjct: 61 MTKIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQDRKMILGPTHEETFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPR+GV+R REF+M+DAYSF + Y +M + Sbjct: 121 ELKSYKRMPLVLYQIQDKFRDEDRPRYGVLRGREFIMQDAYSFTSNDQDLDTIYRQMEHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL+ + + G +GG S EF +AD GE + S Sbjct: 181 YTNIFDRLGLRYRSIIGDGGAMGGKDSKEFSAIADIGEDTIVYS 224 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GT+Y+ M A F +G+ + MGSYGIG R+++A+ E D G+ Sbjct: 403 TRGIEIGHIFKLGTRYTETMGANFLDENGRSQPIIMGSYGIGVSRLLSAIAEQQADEHGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP ++APF I LI + + + I L G V DD E+ G +FA +DL+ Sbjct: 463 VWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEVAGYSVLVDDRNERPGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G PL+V VG K V D VE+K R TG ++ EE+I+ Sbjct: 523 GVPLRVTVGKKAV-DEIVELKLRKTGETIEVKKEELIS 559 >gi|301066624|ref|YP_003788647.1| prolyl-tRNA synthetase [Lactobacillus casei str. Zhang] gi|300439031|gb|ADK18797.1| Prolyl-tRNA synthetase [Lactobacillus casei str. Zhang] Length = 575 Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 146/224 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ F+P +E P AE SHK+MLR+G + Q G+Y++LPL ++ L + AII +E Sbjct: 1 MKQSRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQIQAGVYAYLPLAERVLARIEAIIDDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A++M +P L A+LW ESGRY++YG + +L +R D+ MI GPTHEE TD+ R+ Sbjct: 61 MTKIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQDRKMILGPTHEETFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPR+GV+R REF+M+DAYSF + Y +M + Sbjct: 121 ELKSYKRMPLVLYQIQDKFRDEDRPRYGVLRGREFIMQDAYSFTSNDQDLDTIYRQMEHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL+ + + G +GG S EF +AD GE + S Sbjct: 181 YTNIFDRLGLRYRSIIGDGGAMGGKDSKEFSAIADIGEDTIVYS 224 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GT+Y+ M A F +G+ + MGSYGIG R+++A+ E D G+ Sbjct: 403 TRGIEIGHIFKLGTRYTETMGANFLDENGRSQPIIMGSYGIGVSRLLSAIAEQQADEHGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP ++APF I LI + + + I L G V DD E+ G +FA +DL+ Sbjct: 463 VWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEDAGYSVLVDDRNERPGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G PL+V VG K V D VE+K R TG ++ EE+I+ Sbjct: 523 GVPLRVTVGKKAV-DEIVELKLRKTGETIEVKKEELIS 559 >gi|227534928|ref|ZP_03964977.1| prolyl-tRNA synthetase (proline--tRNA ligase) (ProRS) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187684|gb|EEI67751.1| prolyl-tRNA synthetase (proline--tRNA ligase) (ProRS) [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 575 Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 146/224 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ F+P +E P AE SHK+MLR+G + Q G+Y++LPL ++ L + AII +E Sbjct: 1 MKQSRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQIQAGVYAYLPLAERVLARIEAIIDDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A++M +P L A+LW ESGRY++YG + +L +R D+ MI GPTHEE TD+ R+ Sbjct: 61 MTKIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQDRKMILGPTHEETFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPR+GV+R REF+M+DAYSF + Y +M + Sbjct: 121 ELKSYKRMPLVLYQIQDKFRDEDRPRYGVLRGREFIMQDAYSFTSNDQDLDTIYRQMEHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL+ + + G +GG S EF +AD GE + S Sbjct: 181 YTNIFDRLGLRYRSIIGDGGAMGGKDSKEFSAIADIGEDTIVYS 224 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GT+Y+ M A F +G+ + MGSYGIG R+++A+ E D G+ Sbjct: 403 TRGIEIGHIFKLGTRYTETMGANFLDENGRSQPIIMGSYGIGVSRLLSAIAEQQADEHGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP ++APF I LI + + + I L G V DD E+ G +FA +DL+ Sbjct: 463 VWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEVAGYSVLVDDRNERPGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G PL+V VG K V D VE+K R TG ++ EE+I+ Sbjct: 523 GVPLRVTVGKKAV-DEIVELKLRKTGETIEVKKEELIS 559 >gi|191638564|ref|YP_001987730.1| prolyl-tRNA synthetase [Lactobacillus casei BL23] gi|190712866|emb|CAQ66872.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [Lactobacillus casei BL23] Length = 579 Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 146/224 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ F+P +E P AE SHK+MLR+G + Q G+Y++LPL ++ L + AII +E Sbjct: 5 MKQSRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQIQAGVYAYLPLAERVLARIEAIIDDE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A++M +P L A+LW ESGRY++YG + +L +R D+ MI GPTHEE TD+ R+ Sbjct: 65 MTKIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQDRKMILGPTHEETFTDLVRN 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPR+GV+R REF+M+DAYSF + Y +M + Sbjct: 125 ELKSYKRMPLVLYQIQDKFRDEDRPRYGVLRGREFIMQDAYSFTSNDQDLDTIYRQMEHA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL+ + + G +GG S EF +AD GE + S Sbjct: 185 YTNIFDRLGLRYRSIIGDGGAMGGKDSKEFSAIADIGEDTIVYS 228 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GT+Y+ M A F +G+ + MGSYGIG R+++A+ E D G+ Sbjct: 407 TRGIEIGHIFKLGTRYTETMGANFLDENGRSQPIIMGSYGIGVSRLLSAIAEQQADEHGL 466 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP ++APF I LI + + + I L G V DD E+ G +FA +DL+ Sbjct: 467 VWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEVAGYSVLVDDRNERPGVKFADSDLI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G PL+V VG K V D VE+K R TG ++ EE+I+ Sbjct: 527 GVPLRVTVGKKAV-DEIVELKLRKTGETIEVKKEELIS 563 >gi|315032880|gb|EFT44812.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0017] gi|315150170|gb|EFT94186.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0012] Length = 572 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 104/226 (46%), Positives = 144/226 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 3/168 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ V A +GIE+GHIF GT+YS M AT +G++ V MG YGIG R+++ Sbjct: 391 DPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E + D +GI WP +APF + ++ + D+ +++ A +++ G +V DD E Sbjct: 451 AIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ Sbjct: 511 RAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEEL 557 >gi|229545199|ref|ZP_04433924.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|256853721|ref|ZP_05559086.1| prolyl-tRNA synthetase [Enterococcus faecalis T8] gi|257079587|ref|ZP_05573948.1| prolyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294779463|ref|ZP_06744861.1| proline--tRNA ligase [Enterococcus faecalis PC1.1] gi|307270862|ref|ZP_07552149.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|307287732|ref|ZP_07567775.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|307291052|ref|ZP_07570938.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|229309744|gb|EEN75731.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|256710664|gb|EEU25707.1| prolyl-tRNA synthetase [Enterococcus faecalis T8] gi|256987617|gb|EEU74919.1| prolyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294453469|gb|EFG21873.1| proline--tRNA ligase [Enterococcus faecalis PC1.1] gi|306497901|gb|EFM67432.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|306501470|gb|EFM70773.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|306512775|gb|EFM81420.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|315030982|gb|EFT42914.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4000] Length = 572 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 104/226 (46%), Positives = 144/226 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 3/168 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ V A +GIE+GHIF GT+YS M AT +G++ V MG YGIG R+++ Sbjct: 391 DPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E + D +GI WP +APF + ++ + D+ +++ A +++ G +V DD E Sbjct: 451 AIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ Sbjct: 511 RAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEEL 557 >gi|229549443|ref|ZP_04438168.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255972147|ref|ZP_05422733.1| prolyl-tRNA synthetase [Enterococcus faecalis T1] gi|257421971|ref|ZP_05598961.1| prolyl-tRNA synthetase [Enterococcus faecalis X98] gi|312953422|ref|ZP_07772262.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|229305680|gb|EEN71676.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255963165|gb|EET95641.1| prolyl-tRNA synthetase [Enterococcus faecalis T1] gi|257163795|gb|EEU93755.1| prolyl-tRNA synthetase [Enterococcus faecalis X98] gi|310628631|gb|EFQ11914.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|315152090|gb|EFT96106.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0031] gi|315155317|gb|EFT99333.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0043] gi|315159106|gb|EFU03123.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0312] gi|327535671|gb|AEA94505.1| proline--tRNA ligase [Enterococcus faecalis OG1RF] Length = 572 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 104/226 (46%), Positives = 144/226 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 3/168 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ V A +GIE+GHIF GT+YS M AT +G++ V MG YGIG R+++ Sbjct: 391 DPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E + D +GI WP +APF + ++ + D+ +++ A +++ G +V DD E Sbjct: 451 AIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ Sbjct: 511 RAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEEL 557 >gi|268679949|ref|YP_003304380.1| prolyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268617980|gb|ACZ12345.1| prolyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 567 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 145/221 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P ++ P+DA + SH+ ++R G I Q G+Y++LP+G+ LD + +++EE Sbjct: 1 MKFSKLYAPTTKDAPKDATLPSHQYLVRGGFIVQVGSGLYNFLPMGKIVLDKIRNVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + TGA E+ + + A+LW +SGRYD +GKE+ R+ DR + + GPTHEEV+ DI R+ Sbjct: 61 MDETGAQEIQMGVVSPAELWKQSGRYDVFGKELCRIKDRKENEFVLGPTHEEVVVDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPRFG++R REF+MKD YSF K ++ M + Sbjct: 121 RINSYKQLPLHLYQITTKFRDEARPRFGLLRGREFIMKDGYSFHEDEASMKAEFDVMEQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y +IF+RLGL + A+SG IGG S EF+VLA GE + Sbjct: 181 YTKIFNRLGLDFRAVEADSGAIGGSGSKEFMVLAQNGEDDI 221 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KY+ M ATF +GK MG YG+G R+VA +IE+SHD KG I Sbjct: 405 KGIEVGHIFQLGQKYAKAMGATFLDKNGKAQPFYMGCYGVGVSRLVAVMIEASHDEKGCI 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W AP+ + +I + D+ E+IY+ L + V DD E+ G + +L+G Sbjct: 465 WNKQTAPYLLDIIVSNSKDEAQSAYAEEIYSALMQERLSVLLDDRNERFGFKMKDYELIG 524 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLT 423 P +IVG K + + VEI R T Sbjct: 525 LPYALIVG-KELEEGFVEIVERKT 547 >gi|257084658|ref|ZP_05579019.1| prolyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|256992688|gb|EEU79990.1| prolyl-tRNA synthetase [Enterococcus faecalis Fly1] Length = 572 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 104/226 (46%), Positives = 144/226 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 3/168 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ V A +GIE+GHIF GT+YS M AT +G++ V MG YGIG R+++ Sbjct: 391 DPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E + D +GI WP +APF + ++ + D+ +++ A +++ G +V DD E Sbjct: 451 AIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ Sbjct: 511 RAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEEL 557 >gi|257087410|ref|ZP_05581771.1| prolyl-tRNA synthetase [Enterococcus faecalis D6] gi|256995440|gb|EEU82742.1| prolyl-tRNA synthetase [Enterococcus faecalis D6] gi|315025439|gb|EFT37371.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2137] Length = 572 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 104/226 (46%), Positives = 144/226 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 101/168 (60%), Gaps = 3/168 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ V A +GIE+GHIF GT+YS M AT +G++ V MG YGIG R+++ Sbjct: 391 DPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E + D GI WP +APF + ++ + D+ +++ A +++ G +V DD E Sbjct: 451 AIVEQNADEHGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ Sbjct: 511 RAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEEL 557 >gi|315164831|gb|EFU08848.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1302] Length = 572 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 104/226 (46%), Positives = 144/226 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 3/168 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ V A +GIE+GHIF GT+YS M AT +G++ V MG YGIG R+++ Sbjct: 391 DPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E + D +GI WP +APF + ++ + D+ +++ A +++ G +V DD E Sbjct: 451 AIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ Sbjct: 511 RAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEEL 557 >gi|227553916|ref|ZP_03983963.1| prolyl-tRNA synthetase [Enterococcus faecalis HH22] gi|255975215|ref|ZP_05425801.1| prolyl-tRNA synthetase [Enterococcus faecalis T2] gi|256617163|ref|ZP_05474009.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256763073|ref|ZP_05503653.1| prolyl-tRNA synthetase [Enterococcus faecalis T3] gi|256961317|ref|ZP_05565488.1| prolyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256963555|ref|ZP_05567726.1| prolyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|257082033|ref|ZP_05576394.1| prolyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|257416590|ref|ZP_05593584.1| prolyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257419837|ref|ZP_05596831.1| prolyl-tRNA synthetase [Enterococcus faecalis T11] gi|293383602|ref|ZP_06629512.1| proline--tRNA ligase [Enterococcus faecalis R712] gi|293387285|ref|ZP_06631842.1| proline--tRNA ligase [Enterococcus faecalis S613] gi|307271494|ref|ZP_07552766.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|307277205|ref|ZP_07558309.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|307285834|ref|ZP_07565968.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|312899806|ref|ZP_07759125.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|312906152|ref|ZP_07765164.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|312909497|ref|ZP_07768352.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|227176902|gb|EEI57874.1| prolyl-tRNA synthetase [Enterococcus faecalis HH22] gi|255968087|gb|EET98709.1| prolyl-tRNA synthetase [Enterococcus faecalis T2] gi|256596690|gb|EEU15866.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256684324|gb|EEU24019.1| prolyl-tRNA synthetase [Enterococcus faecalis T3] gi|256951813|gb|EEU68445.1| prolyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256954051|gb|EEU70683.1| prolyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|256990063|gb|EEU77365.1| prolyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|257158418|gb|EEU88378.1| prolyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] gi|257161665|gb|EEU91625.1| prolyl-tRNA synthetase [Enterococcus faecalis T11] gi|291079114|gb|EFE16478.1| proline--tRNA ligase [Enterococcus faecalis R712] gi|291083322|gb|EFE20285.1| proline--tRNA ligase [Enterococcus faecalis S613] gi|295113413|emb|CBL32050.1| prolyl-tRNA synthetase, family II [Enterococcus sp. 7L76] gi|306502595|gb|EFM71862.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|306506135|gb|EFM75301.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|306511766|gb|EFM80764.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|310627798|gb|EFQ11081.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|311290170|gb|EFQ68726.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|311293056|gb|EFQ71612.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|315146006|gb|EFT90022.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2141] gi|315146660|gb|EFT90676.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4244] gi|315161730|gb|EFU05747.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0645] gi|315166430|gb|EFU10447.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1341] gi|315170318|gb|EFU14335.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1342] gi|315173646|gb|EFU17663.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1346] gi|315574384|gb|EFU86575.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0309B] gi|315580142|gb|EFU92333.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0309A] Length = 572 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 104/226 (46%), Positives = 144/226 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 3/168 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ V A +GIE+GHIF GT+YS M AT +G++ V MG YGIG R+++ Sbjct: 391 DPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E + D +GI WP +APF + ++ + D+ +++ A +++ G +V DD E Sbjct: 451 AIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ Sbjct: 511 RAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEEL 557 >gi|33863527|ref|NP_895087.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] gi|81834835|sp|Q7TUU4|SYP_PROMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33640976|emb|CAE21434.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] Length = 599 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 111/229 (48%), Positives = 148/229 (64%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEIASH+L+LR G I + + GIY++LPL + L + +I++EE Sbjct: 1 MRVSRLMLVTLRDIPADAEIASHQLLLRGGYIRRVTSGIYAYLPLMWRVLRKITSIVQEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA+E +P LQ A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 MDATGALETLLPQLQPAELWRRSGRWQGYTAGEGLMFHLEDRQGRELGLGPTHEEVITSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF +Y M Sbjct: 121 AGDLLRSYRQLPVTLYQIQSKFRDEIRPRFGLMRGREFIMKDAYSFHSCEADLAMTYRAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y RIF R GL+++ + A+SG IGG S EF+V AD GE + S D Sbjct: 181 DEAYQRIFSRCGLETVAVEADSGAIGGASSQEFMVTADAGEDLILISGD 229 Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 1/142 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS + A F G MG YGIG R+ A +E HD G+ Sbjct: 430 RGIEVGHIFQLGRKYSEALEACFTNDQGTQEPFWMGCYGIGISRLAQAAVEQHHDEAGMK 489 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++APF++ ++ D+V + E++Y+ L + DD E+ G +F ADL+G Sbjct: 490 WPLAIAPFEVIIVVANIQDEVQQKLAEQLYSELQAADIEALLDDRTERAGVKFKDADLIG 549 Query: 400 FPLQVIVGSKFVSDSKVEIKHR 421 P +V+VG + + +VE+ R Sbjct: 550 IPWRVVVG-RDAAKGQVELIQR 570 >gi|256956661|ref|ZP_05560832.1| prolyl-tRNA synthetase [Enterococcus faecalis DS5] gi|257090544|ref|ZP_05584905.1| prolyl-tRNA synthetase [Enterococcus faecalis CH188] gi|300861128|ref|ZP_07107215.1| proline--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|312903702|ref|ZP_07762876.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|256947157|gb|EEU63789.1| prolyl-tRNA synthetase [Enterococcus faecalis DS5] gi|256999356|gb|EEU85876.1| prolyl-tRNA synthetase [Enterococcus faecalis CH188] gi|300850167|gb|EFK77917.1| proline--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|310632894|gb|EFQ16177.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|315035640|gb|EFT47572.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0027] gi|315578695|gb|EFU90886.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0630] Length = 572 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 104/226 (46%), Positives = 144/226 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 101/168 (60%), Gaps = 3/168 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ V A +GIE+GHIF GT+YS M AT +G++ V MG YGIG R+++ Sbjct: 391 DPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E + D +GI WP +APF + ++ + D+ +++ A + + G +V DD E Sbjct: 451 AIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMIEAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ Sbjct: 511 RAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEEL 557 >gi|323339428|ref|ZP_08079710.1| proline--tRNA ligase [Lactobacillus ruminis ATCC 25644] gi|323093139|gb|EFZ35729.1| proline--tRNA ligase [Lactobacillus ruminis ATCC 25644] Length = 572 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 104/226 (46%), Positives = 146/226 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE SH+LMLR G I Q + G+Y++LPL + L N+ AIIREE Sbjct: 1 MKQSKLLIPTLKEVPSDAEAISHQLMLRGGYIKQITAGMYAYLPLAYRVLRNIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A EM VP A+LW ++GRY++YG + + DR+++ I GPTHEE T I R Sbjct: 61 MENIDAAEMLVPAALPAELWQQTGRYETYGPNLFKFQDRHERDFILGPTHEETFTTIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP T YQIQ K+RDE RPRFG++R REF+MKDAYSF E ++ M + Sbjct: 121 AVKTYKKLPITLYQIQTKYRDENRPRFGLLRGREFIMKDAYSFHAEEESLDKTFRDMDSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +F+R+GL + ++G +GG+ S EF+ +A GE V S + Sbjct: 181 YTNVFNRVGLNFRSIIGDAGAMGGNNSKEFMAIAPIGEDTVVYSDE 226 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 65/160 (40%), Positives = 97/160 (60%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GT+YS + A +G+ + MG YGIG R+++A++E D GI Sbjct: 403 TRGIEIGHIFKLGTRYSKDLDAVVLDENGRQLPIIMGCYGIGVSRLLSAIVEQHSDENGI 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +WP S+APF + +I N+K +QV + EK+ L G V DD E+ G +FA +D Sbjct: 463 VWPRSIAPFDVHVIPVNVKKEEQV--ELSEKVTELLENAGYKVLVDDRKERPGVKFADSD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+G P ++ VG K ++ VEIK R TG ++ L+E++N Sbjct: 521 LIGIPARITVGKK-AAEGIVEIKLRRTGETLEVKLDELLN 559 >gi|224437778|ref|ZP_03658725.1| prolyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313144224|ref|ZP_07806417.1| prolyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313129255|gb|EFR46872.1| prolyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] Length = 593 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 150/226 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+ L+E P+DA + SH+ ++R G I Q GIY++LPLG+K LD V II+EE Sbjct: 1 MRFSQLFVNTLKEAPKDALLKSHQYLVRGGFIQQVGSGIYNFLPLGKKLLDKVRFIIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + T A E+ + + ADLW ESGRY+ YG+E+LRL DR + + GPTHEEV+T I ++ Sbjct: 61 MDITNAQEILMGFVTPADLWRESGRYEKYGRELLRLVDRKENEFVLGPTHEEVVTFIAKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQI KFRDE+RPRFG+MR REF+MKD YSF + E ++ M + Sbjct: 121 GVKSYKQLPVHLYQIHTKFRDEVRPRFGLMRGREFIMKDGYSFHSSFEDLDREFDVMEQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +I R+G+ + A+SG IGG S EF+VLA GE + K+ Sbjct: 181 YKKILERIGVDFKIVEADSGAIGGSGSKEFMVLAPCGEDTIVVCKN 226 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVGHIF GTKYS M+A F DGK + MG YG G R++ A++E D G Sbjct: 426 TKGIEVGHIFKLGTKYSHAMNAQFLDKDGKAQDLIMGCYGFGVSRILPAILEQKSDELGC 485 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +W V F +++I D + KIY G DV DD E+ G + +LL Sbjct: 486 VWGKEVKVFDLAIIISNVKDIAQSEFATKIYEECKARGIDVLLDDRDERFGVKMKDFELL 545 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 GF +IVG K +++ ++E+ R Sbjct: 546 GFSFALIVG-KGLNEGRLELIKR 567 >gi|321472321|gb|EFX83291.1| hypothetical protein DAPPUDRAFT_127919 [Daphnia pulex] Length = 406 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 127/396 (32%), Positives = 203/396 (51%), Gaps = 39/396 (9%) Query: 23 HKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVE 82 KL+ G++ Q+S G+++ PLG ++L+ + I+ +E G ++ +P L + +LW Sbjct: 5 QKLLNEMGIVRQNSPGLFTLTPLGVRSLEKLVKIVDDELKYVGCQKLQLPILTAGNLWKT 64 Query: 83 SGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPFTFYQIQLKFRD 141 +GR++S G E+L + DR+ + + PTHEE +TD S + +++ LP YQI KFRD Sbjct: 65 TGRWESTGSELLTIKDRHARDYVLSPTHEEAITDFVASLPQLTHKQLPLKLYQITSKFRD 124 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 E++PRFG++R REF MKD Y+FD T E + +Y+ + +Y RIF RL + + + +G Sbjct: 125 EIKPRFGLLRGREFTMKDLYTFDKTVEAAHETYDLICTAYNRIFQRLNVPFVKVVGSTGN 184 Query: 202 IGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS 260 IGG SHE+ + GE + CS + N+ + I+ + + +P T Sbjct: 185 IGGLSSHEYHFPSSIGEDDLKICS---------ACNSGSNAEIATTDVCSKCGSPVKQT- 234 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 +GIEV H F GTKYS ++A F DG QMG YGIG Sbjct: 235 -------------------KGIEVAHTFLLGTKYSQILNALFSAEDGSRSVCQMGCYGIG 275 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD------QVCRDACEKIYARLSK 374 R++AA +E I WP +AP+ + ++ K Q+ +I ++ Sbjct: 276 ISRILAASVEVLGTDSEIRWPKLIAPYSVCVVAPKGGSKEESAIQLAHFLANQI-DQIQP 334 Query: 375 VGCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSK 409 DV DD M +G + A +G+P ++VG K Sbjct: 335 FMQDVILDDRMTTTVGKKLMEAKRVGYPYIIVVGKK 370 >gi|260886940|ref|ZP_05898203.1| proline--tRNA ligase [Selenomonas sputigena ATCC 35185] gi|260863002|gb|EEX77502.1| proline--tRNA ligase [Selenomonas sputigena ATCC 35185] Length = 543 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 96/199 (48%), Positives = 137/199 (68%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y++LPL + + + IIREE + G E+ +P +Q A++W ESGR Sbjct: 1 MLRAGMIRKAAGGVYTYLPLAWRTIKKIEQIIREEMDAAGGQELCMPIMQPAEIWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 + +G+EM RL D + + GPTHEE++T + R ++SY+ LP YQIQ K+RDE+RP Sbjct: 61 WSVFGQEMFRLKDCHGREFCLGPTHEEMITTLVRDEVRSYKQLPLLLYQIQNKYRDEIRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFG+MRSREF+MKD YSFD G+ SY KM+ +Y +F R GLK P+ A++G IGG+ Sbjct: 121 RFGLMRSREFIMKDLYSFDKDEAGADISYKKMYDAYTNVFTRCGLKFRPVEADAGAIGGN 180 Query: 206 LSHEFIVLADTGETQVFCS 224 +HEF VLA GE+++ C Sbjct: 181 HTHEFTVLAAAGESEIACC 199 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 96/158 (60%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE G +F GTKYS + ATF +GK+ + MG YGIG R +AA IE +D GII Sbjct: 378 RGIEAGQVFKLGTKYSEALGATFLDENGKEKALFMGCYGIGVGRTMAAAIEQHNDEHGII 437 Query: 340 WPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP ++AP+++ + +N KA +Q+ E++Y L G D DD ++ G +F ADL Sbjct: 438 WPRAIAPYEVVVVPVNAKASEQLA--LAEEVYEMLLAAGVDAILDDRKDRAGVKFKDADL 495 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G+PL++ +G K + + K+E+K R +G D + E + Sbjct: 496 IGYPLRITIGPKALEEGKIELKVRRSGESCDCTKAECL 533 >gi|257459695|ref|ZP_05624804.1| prolyl-tRNA synthetase [Campylobacter gracilis RM3268] gi|257443120|gb|EEV18254.1| prolyl-tRNA synthetase [Campylobacter gracilis RM3268] Length = 572 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 109/225 (48%), Positives = 139/225 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F P L+E PRDA + SH L++R G I Q G+Y++LPLG+ L+ + A+IR+E Sbjct: 1 MKFSKLFAPSLKEAPRDAVLPSHALLIRAGFIEQLGSGLYNFLPLGKIVLERICAVIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+S + SAD W +SGRY YGKE+LR DR D + PT+EE + Sbjct: 61 MDAAGAQEVSFSVVTSADAWKKSGRYAKYGKELLRFKDRKDNDFVLSPTNEEAAVLMVAD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPRFG++R REF MKDAYSF K + M + Sbjct: 121 KITSYKQLPLNIYQINTKFRDEARPRFGLLRGREFTMKDAYSFHADAADMKREFEVMRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF RLGL + A+SG IGG S EF+VLAD GE + K Sbjct: 181 YSRIFTRLGLNFRTVDADSGAIGGSGSKEFMVLADNGEDDIVVCK 225 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 96/163 (58%), Gaps = 1/163 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF GT+YS PM A F A+GK MG YGIGA R++A IESSHD +G + Sbjct: 407 KGIEVGHIFQLGTRYSEPMGARFLDANGKARAFYMGCYGIGASRLIAVAIESSHDERGCV 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP +APF++ +I D + EK+Y + + G V DD E+ G + +L+G Sbjct: 467 WPRELAPFELEIIISNHKDAAAVEFAEKLYEQCRERGIRVLLDDRAERFGVKMNDFELMG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP V+VG K +++ VE R R+ +S +E++++ + Sbjct: 527 FPYAVLVG-KALAERSVEFITRAGLKRQSVSADEILSFIERKL 568 >gi|28378679|ref|NP_785571.1| prolyl-tRNA synthetase [Lactobacillus plantarum WCFS1] gi|254556877|ref|YP_003063294.1| prolyl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|300768192|ref|ZP_07078097.1| proline--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180820|ref|YP_003924948.1| prolyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum ST-III] gi|81840975|sp|Q88VK1|SYP_LACPL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|28271515|emb|CAD64420.1| proline--tRNA ligase [Lactobacillus plantarum WCFS1] gi|254045804|gb|ACT62597.1| prolyl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|300494256|gb|EFK29419.1| proline--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046311|gb|ADN98854.1| prolyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 569 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 104/224 (46%), Positives = 143/224 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE SH++MLR G I Q S G+Y++LPL + L N+ IIR+E Sbjct: 1 MKQSKLLIPTLKEVPNDAEALSHQMMLRAGYIRQISAGMYAYLPLAYRVLTNIEKIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A EM VP + A+LW +GRY++YG E+ +L +R+D+ I GPTHEE T I R Sbjct: 61 MEKIDAAEMLVPAVIPAELWKATGRYETYGPELFKLKNRHDREFILGPTHEETFTSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ K+RDE RPR+G++R REF+MKDAYSF ++ M + Sbjct: 121 EIKSYKRLPLTLYQIQAKYRDEDRPRYGLLRGREFIMKDAYSFHADEASLDDTFQDMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R+GLK + + G +GG S E+ +A GE + S Sbjct: 181 YQNIFERVGLKFRSIIGDGGAMGGKDSREYSAIAPVGEDTIVYS 224 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 99/159 (62%), Gaps = 5/159 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIE+GHIF GT+YS + A A+G++ V MG YGIG R+++A+ E D G+I Sbjct: 404 KGIEIGHIFKLGTRYSKDLHAEVLDANGRNIPVIMGCYGIGVSRLLSAIAEQRADENGLI 463 Query: 340 WPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP ++APF + +I N K DQV + +++ A+L G +V +DD E+ G +FA +DL Sbjct: 464 WPKAIAPFDVHVIPVNPKKADQV--EVADQVEAQLEAAGYNVLYDDRKERPGVKFADSDL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +G P ++ +G K S+ VEIK R TG ++ EE+ N Sbjct: 522 MGIPARITIGKK-ASEGIVEIKLRQTGETLEVKQEEIAN 559 >gi|195953061|ref|YP_002121351.1| prolyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] gi|226701299|sp|B4U8B2|SYP_HYDS0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|195932673|gb|ACG57373.1| prolyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 565 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 145/224 (64%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFL +E P + E ASH+ + + G I Q + GIY P+ + L + I+R+E Sbjct: 1 MRWSRYFLYTTKEEPSETEAASHRFLTKAGFIKQVASGIYELTPIAFRVLKKIENIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ + L A+LW E+GR+D YG E+ +L DR+D+ GPTHEE +TD+ R Sbjct: 61 MDKAGAQELLLTILNPAELWKETGRWDYYGNELFKLKDRSDRDYCLGPTHEEEITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQI KFRDE RPR+G++R REF+MKDAYSFD E +K+SY+ M + Sbjct: 121 TVRSYKQLPLNLYQIHTKFRDEKRPRYGLIRGREFIMKDAYSFDTDEESAKNSYDIMVKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 Y IF RL L + ++A+ G IGG SHEF+ + GE + +C Sbjct: 181 YKNIFKRLNLNILMVKADVGQIGGKSSHEFVAITKYGEALIAYC 224 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 96/159 (60%), Gaps = 1/159 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+G+E+GH F GT+YSLPM A F DG + V MG YGIG R++AA++E HD KGI Sbjct: 398 AQGLELGHTFLLGTRYSLPMKAFFTDKDGVEKPVVMGCYGIGISRLIAALVEQYHDEKGI 457 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAPF++ + + D + E +Y L++ G +V +DD G +F ADL+ Sbjct: 458 KWPLPVAPFQVLISCVNTSDDIQYSTSEHLYKSLTQEGIEVLFDDRDVSPGVKFNDADLI 517 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P +++VG K D VE+ R T D+ +++V++Y Sbjct: 518 GIPYRIVVGKK-AKDGLVEVVDRHTLKAVDVPIDKVLDY 555 >gi|307198619|gb|EFN79469.1| Probable prolyl-tRNA synthetase, mitochondrial [Harpegnathos saltator] Length = 434 Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 143/445 (32%), Positives = 223/445 (50%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPI---LQENPRDAEI--ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAI 56 R SK F P+ + N EI S+KLM+ G+I S G+YS LPLG + L+ + I Sbjct: 11 RTSKIFQPLPSGIFANKDKTEILSKSYKLMINYGIIKSVSTGMYSILPLGMRVLNKLIKI 70 Query: 57 IREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTD 116 I +E GA ++ +P L SA LW +S RY+S E+ + DR+DK I PT+EE + D Sbjct: 71 IDKEMTDLGAEKIMLPALTSAKLWKKSNRYNSNKTELFTVTDRHDKEYILSPTYEEAICD 130 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + + ++LP YQI K+RDE++PR G +RSREF+MKD Y+FD T ++ +YN Sbjct: 131 LVSATYLPEKSLPLRLYQISSKWRDEMKPRLGFIRSREFIMKDLYTFDTTLNKAQDTYNL 190 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSE 235 + SY IF ++G+ + + G IGG SHE+ ++D GE + +CS S Sbjct: 191 VCESYSNIFKQIGIDHMKAVGDVGTIGGLSSHEYHYISDIGEDVILWCS---------SC 241 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR--GIEVGHIFYFGTK 293 N ++IIS + PE K R +E+GH F TK Sbjct: 242 NYTINEIIS----------------------KITTCPECKGELQRHNSVEIGHTFLLNTK 279 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 YS P++A + + K + MG YG+G R+ A ++E + WP +AP+ +I Sbjct: 280 YSQPLNAMYI-ENNKLKPMIMGCYGLGVSRIFALIVEILSTNNEMRWPTKLAPYTACIIP 338 Query: 354 IK--AHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKF 410 K + ++ E+++ L K D DD + IG + A +G+P +++G Sbjct: 339 PKTGSKEEYISAYIEQLFEILQKRDIDTILDDRTQFTIGKRLVYARAIGYPYIIVIGKAA 398 Query: 411 VSDSKV-EIKHRLTGIREDMSLEEV 434 + EI + +SLE++ Sbjct: 399 TQSIPLFEIHDINNSVSHKLSLEQI 423 >gi|229552422|ref|ZP_04441147.1| proline--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|258539792|ref|YP_003174291.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] gi|229314159|gb|EEN80132.1| proline--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|257151468|emb|CAR90440.1| Prolyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] Length = 576 Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 145/224 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ F+P +E P AE SHK+MLR+G + Q G+Y++LPL ++ L + AII +E Sbjct: 1 MKQSRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQVQAGVYAYLPLAERVLSRIEAIIDDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A++M +P L A+LW ESGRY++YG + +L +R D+ MI GPTHEE TD+ R+ Sbjct: 61 MTKIDAVKMKMPALLPAELWEESGRYETYGPNLFKLKNRQDRKMILGPTHEETFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPR+GV+R REF+M+DAYSF + Y +M + Sbjct: 121 ELKSYKRMPLVLYQIQDKFRDEDRPRYGVLRGREFIMQDAYSFTSNDQDLNTIYRQMEHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL+ + + G +GG S EF +A GE + S Sbjct: 181 YTNIFDRLGLRYRTIIGDGGAMGGKDSKEFSAIASIGEDTIVYS 224 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/159 (44%), Positives = 95/159 (59%), Gaps = 5/159 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF GT+YS M A F +G+ + MGSYGIG R+++A+ E D G+I Sbjct: 404 RGIEIGHIFKLGTRYSETMGADFLDENGRSQPIIMGSYGIGVSRLLSAIAEQQADDHGLI 463 Query: 340 WPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP ++APF I LI N+K +Q A I L G V DD E+ G +FA +DL Sbjct: 464 WPTTIAPFDIHLIPVNLKREEQKTLTAA--IGTMLEDAGYSVLVDDRNERPGVKFADSDL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +G PL+V VG K V D VE+K R TG ++ EE+I+ Sbjct: 522 IGIPLRVTVGKKAV-DEIVELKLRKTGETIEVKKEELIS 559 >gi|113955222|ref|YP_731224.1| prolyl-tRNA synthetase [Synechococcus sp. CC9311] gi|123031649|sp|Q0I8J8|SYP_SYNS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|113882573|gb|ABI47531.1| prolyl-tRNA synthetase [Synechococcus sp. CC9311] Length = 598 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 110/229 (48%), Positives = 148/229 (64%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEIAS +L++R G I + GIY++LPL + L V I+REE Sbjct: 1 MRVSRLMLVTLRDVPADAEIASQQLLIRGGFIRRVGSGIYAYLPLMWRVLQRVMRIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N+ GA+E +P LQ A+LW +SGR+ Y M L DR ++++ GPTHEEV+T++ Sbjct: 61 MNQIGALETLLPQLQPAELWEKSGRWQGYTAGEGIMFHLEDRQERSLGLGPTHEEVITEL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF Y +M Sbjct: 121 ASDLLRSYRQLPVTLYQIQSKFRDEIRPRFGLMRGREFIMKDAYSFHGDEGDLARMYEEM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y R+F R GL ++ + A+SG IGG S EF+V AD GE + S D Sbjct: 181 EKAYTRVFQRCGLTAVGVDADSGAIGGAASQEFMVTADAGEDLILISPD 229 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 123/242 (50%), Gaps = 20/242 (8%) Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 GL+ +P+ G IG DLS + A + + + + D +E F + N+ Sbjct: 339 GLQPLPL----GSIGPDLSDHSLAGARSWKERFYKLAD----TTAAELERF--VCGANTS 388 Query: 249 VE-QWTAPYA-----ATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMS 299 E +W A ++ D+ N K D PE RGIEVGHIF G KYSL M Sbjct: 389 NEHRWGASWSDLGTIPAMDLRNAKAGDHCVHRPEQSLEERRGIEVGHIFQLGRKYSLSMG 448 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A +GK ++ MG YGIG R+ A +E HD GIIWP S+APF++ ++ D+ Sbjct: 449 AQITTKEGKQEHLWMGCYGIGISRLAQAAVEQHHDDAGIIWPLSIAPFQVIVVVANVQDE 508 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V E+IY L G DV DD GE+ G +F ADL+G P +V+VG + ++ VE+ Sbjct: 509 VQMALGEEIYNELLASGIDVLLDDRGERAGVKFKDADLIGIPWRVVVG-RAAAEGNVELV 567 Query: 420 HR 421 R Sbjct: 568 KR 569 >gi|225874389|ref|YP_002755848.1| proline--tRNA ligase [Acidobacterium capsulatum ATCC 51196] gi|254782879|sp|C1F3P3|SYP_ACIC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225793232|gb|ACO33322.1| proline--tRNA ligase [Acidobacterium capsulatum ATCC 51196] Length = 585 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 147/225 (65%), Gaps = 2/225 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+P L+E P DAE+ASHK +LR+G I Q GIYS+L GQ++++ + I+REE Sbjct: 3 RWSRLFVPTLREAPSDAEVASHKFLLRSGYIRQLGAGIYSYLLFGQRSINKIVGIVREEM 62 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 ++ G E +P + ADLW ESGR+ G M RL DR + G THEEVMTDI R+ Sbjct: 63 DKIGQ-EFLLPAIHPADLWRESGRWTVMGDNMFRLKDRKGAELCLGMTHEEVMTDIARNE 121 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SY+ LP +YQIQ KFRDE RPR G++R R+FLMKD+YSFDL G SY+ +Y Sbjct: 122 LRSYKQLPQIWYQIQNKFRDEPRPRSGLLRVRQFLMKDSYSFDLNQAGLDKSYDLHDAAY 181 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSK 225 IF R GL + + A+SG +GG S EF+V D GE + C+K Sbjct: 182 RAIFTRCGLNFVVVEADSGAMGGSGSQEFMVYTDAGEDLIASCAK 226 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 97/183 (53%), Gaps = 5/183 (2%) Query: 256 YAATSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 + +D+ N + P E +V A+ +E+GHIF GTKY+ M A +GK+ Sbjct: 397 WTVAADIRNAAEGEGCPVCGEPLKV-AKAVEIGHIFKLGTKYTESMGARVLDENGKEVMP 455 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R++ A IE ++D G P S+APF + + D+ R A E + A+L Sbjct: 456 VMGCYGIGIERILTASIEQNNDANGFWLPRSIAPFDVVVTITNMADETLRQAGEALAAQL 515 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G DV DD E+ G +F ADL+G P + VG K + + K E+ R T +D++L+ Sbjct: 516 EAAGYDVLLDDREERAGVKFKDADLVGIPYRFNVGKKTL-EGKTELVTRATASSQDVALD 574 Query: 433 EVI 435 + Sbjct: 575 AAV 577 >gi|199597103|ref|ZP_03210535.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|258508613|ref|YP_003171364.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|199591907|gb|EDY99981.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|257148540|emb|CAR87513.1| Prolyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|259649920|dbj|BAI42082.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus GG] Length = 576 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 145/224 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ F+P +E P AE SHK+MLR+G + Q G+Y++LPL ++ L + AII +E Sbjct: 1 MKQSRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQVQAGVYAYLPLAERVLSRIEAIIDDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A++M +P L A+LW ESGRY++YG + +L +R D+ MI GPTHEE TD+ R+ Sbjct: 61 MTKIDAVKMKMPALLPAELWEESGRYETYGPNLFKLKNRQDRKMILGPTHEETFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPR+GV+R REF+M+DAYSF + Y +M + Sbjct: 121 ELKSYKRMPLVLYQIQDKFRDEDRPRYGVLRGREFIMQDAYSFTSNDQDLDTIYRQMEHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF RLGL+ + + G +GG S EF +A GE + S Sbjct: 181 YTNIFDRLGLRYRTIIGDGGAMGGKDSKEFSAIASIGEDTIVYS 224 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 67/158 (42%), Positives = 92/158 (58%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GT+YS M A F +G+ + MGSYGIG R+++A+ E D G+ Sbjct: 403 TRGIEIGHIFKLGTRYSETMGADFLDENGRSQPIIMGSYGIGVSRLLSAIAEQQADDHGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP ++APF I LI + + + I L G V DD E+ G +FA +DL+ Sbjct: 463 IWPTTIAPFDIHLIPVNLKREEQKTLTASIGTMLEDAGYSVLVDDRNERPGVKFADSDLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G PL+V VG K V D VE+K R TG ++ EE+I+ Sbjct: 523 GIPLRVTVGKKAV-DEIVELKLRKTGETIEVKKEELIS 559 >gi|116072890|ref|ZP_01470155.1| prolyl-tRNA synthetase [Synechococcus sp. BL107] gi|116064416|gb|EAU70177.1| prolyl-tRNA synthetase [Synechococcus sp. BL107] Length = 593 Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 152/250 (60%), Gaps = 10/250 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +AEIASH+L+LR G I + GIY +LPL K + + AI+R+E Sbjct: 1 MRVSRLLLVTLRDVPAEAEIASHQLLLRGGYIRRVGSGIYGYLPLMWKVIQRITAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N+ GA E +P L A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 LNKAGAQETLLPQLHPAELWQRSGRWQGYTAGEGIMFHLEDRQGRELGLGPTHEEVVTSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SY+ LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSF + +++Y M Sbjct: 121 AGDLLQSYKQLPVNLYQVQTKFRDEIRPRFGLMRGREFIMKDAYSFHASEADLRNTYLDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM-------DF 230 +Y RIF R GL ++P+ A+SG IGG S EF+V AD GE + S D Sbjct: 181 DQAYRRIFERCGLAAVPVDADSGAIGGAASQEFMVTADAGEDLILLSDDGTYAANQEKAI 240 Query: 231 PIPSENTDFD 240 +PS+ D D Sbjct: 241 SVPSKAMDLD 250 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 64/165 (38%), Positives = 87/165 (52%), Gaps = 8/165 (4%) Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 A + VHN PE + RGIEVGHIF G KYS M + F GK + MG Sbjct: 414 AGEACVHN-------PEAHLIEKRGIEVGHIFQLGRKYSEAMDSRFTNEAGKTEHFWMGC 466 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+ A +E HD GI WP ++AP++ ++ DQ + E +Y +L G Sbjct: 467 YGIGISRLAQAAVEQHHDDAGICWPPAIAPYEAIVVVANMQDQTQAELGESLYEQLLAAG 526 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +DD E+ G +F ADL+G P +V+VG + D VE+ R Sbjct: 527 VDALFDDRKERAGVKFKDADLIGIPWRVVVG-RDAGDGVVELVER 570 >gi|322434762|ref|YP_004216974.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] gi|321162489|gb|ADW68194.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] Length = 612 Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 109/223 (48%), Positives = 147/223 (65%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+P L+E P DAE+ASHKL+LR G + Q GIYS+L LGQ++++ + AIIR+E Sbjct: 3 RWSKLFIPTLREAPSDAEVASHKLLLRAGYVRQLGAGIYSYLFLGQRSVNKIVAIIRQEM 62 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E +PT+ ++W ESGR+ G M RL DR + G THEEVMT I RS Sbjct: 63 DTIGQ-EFLLPTIHPREVWEESGRWTGMGDNMFRLKDRKGAELCLGMTHEEVMTTIARSE 121 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SY+ LP +YQIQ KFRDE RP+ G++R R+F+MKD+YSFD+ G SYN +Y Sbjct: 122 LRSYKQLPQIWYQIQTKFRDEPRPKSGLLRVRQFIMKDSYSFDIDEAGLDLSYNLHDAAY 181 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 RIF R GL+ + + A+SG +GG S EF+V D GE + S Sbjct: 182 RRIFDRCGLEYVAVEADSGAMGGSQSQEFMVYTDAGEDLIASS 224 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 96/183 (52%), Gaps = 6/183 (3%) Query: 259 TSDVHN--EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T+D+ N E D + + +E+GHIF G KYS M AT DGK+ MGS Sbjct: 423 TADLRNILEGELDPIGNLPLRLGKAVEIGHIFKLGYKYSKSMGATVLNRDGKEVTPIMGS 482 Query: 317 YGIGAMRVVAAVIESS---HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 YGIG R++ A IE+S + G+ P S+APF++ + + +A EKI A L+ Sbjct: 483 YGIGVERILTAAIETSAAKNGGEAYALPASIAPFQVIVTVTNIKEPALVEAGEKIAADLA 542 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G DV DD E+ G +F ADL G P ++ VG K S+ +VE+ RL D+ +E Sbjct: 543 AAGLDVLLDDRDERAGVKFKDADLTGVPYRIAVGKKL-SEGQVELLDRLQNQTLDIPVEA 601 Query: 434 VIN 436 + Sbjct: 602 AVQ 604 >gi|256832247|ref|YP_003160974.1| prolyl-tRNA synthetase [Jonesia denitrificans DSM 20603] gi|256685778|gb|ACV08671.1| prolyl-tRNA synthetase [Jonesia denitrificans DSM 20603] Length = 594 Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 106/218 (48%), Positives = 141/218 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S F+ L+E+P DAE+ASH+L++R G I + + GIYSWLPLG + LD V+A++REE Sbjct: 3 LRLSTLFVRTLREDPVDAEVASHRLLVRAGYIRRAAPGIYSWLPLGLRVLDKVDAVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA + P L + + +GR+ YG + RL DR D + PTHEE+ T + + Sbjct: 63 MERAGAQRVHFPALLPREPYEATGRWTEYGPNLFRLQDRKDGDYLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFDLT EG SY + Sbjct: 123 LYSSYKDLPVTLYQIQTKYRDEARPRAGLIRGREFIMKDAYSFDLTEEGLAESYRAQRDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL + + A SG +GG S EF+ D GE Sbjct: 183 YERIFRRLGLDYVIVAATSGAMGGSRSEEFLTPTDIGE 220 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 3/145 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYGIG RV+AA+ ++ HD +G+ Sbjct: 425 ARGIEIGHIFQLGRKYAEALGLKVLDVNGKHTTVTMGSYGIGVTRVMAALAQAHHDSQGL 484 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADL 397 WP VAP + L+ D +A E + RLS G +V +DD + G +F A+L Sbjct: 485 AWPIQVAPAHVHLV-ATGKDARIFEAAESLAQRLSDRGVEVIYDDRVKVSPGVKFKDAEL 543 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRL 422 G P V+VG + + + +E + R+ Sbjct: 544 FGVPFIVVVG-RGLDEGTIEFRTRV 567 >gi|332686700|ref|YP_004456474.1| prolyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] gi|332370709|dbj|BAK21665.1| prolyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] Length = 574 Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 102/226 (45%), Positives = 147/226 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK F+P L+E P DAE+ SH+++LR G I Q + G+Y++LPL + ++N+ I+REE Sbjct: 1 MRQSKMFIPTLREIPNDAEVLSHQILLRGGYIRQIAAGVYAYLPLANRIIENLKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + AIEM +P + A+LW +SGRY +YG ++ RL DRN++ I GPTHEE ++ + Sbjct: 61 FEKIDAIEMLLPAILPAELWEKSGRYQTYGPDLYRLKDRNERQYILGPTHEETFVELIGN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE RPRFG++R REF+MKD YSF T E +YN + Sbjct: 121 DVNSYKRLPLNLYQIQSKYRDEKRPRFGLLRGREFIMKDGYSFHATEESLDTTYNDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R GL + + G +GG S EF+ ++D GE + S + Sbjct: 181 YSAIFKRCGLVFRSIIGDGGAMGGKDSKEFMAISDIGEDTICFSTE 226 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 65/156 (41%), Positives = 94/156 (60%), Gaps = 1/156 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIE+GHIF GT+YS M+AT +GK+ Y+ MGSYGIG R+ AA+ E + D KG+ Sbjct: 403 TKGIEIGHIFKLGTRYSESMNATILDENGKEQYIIMGSYGIGVSRLFAAIAEQNADDKGV 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +APF I ++ + D E+I + G +V DD E+ G +FA ADL+ Sbjct: 463 NWPIGIAPFDIHVVQMNMKDDEQTQLSEEIEELMISAGYEVLVDDRNERAGVKFAEADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+++ VG K + D VEIK + TG ++ EE+ Sbjct: 523 GCPIRITVGKKAIDDI-VEIKIKRTGEMLEVKKEEL 557 >gi|329767542|ref|ZP_08259065.1| prolyl-tRNA synthetase [Gemella haemolysans M341] gi|328835876|gb|EGF85598.1| prolyl-tRNA synthetase [Gemella haemolysans M341] Length = 566 Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 104/256 (40%), Positives = 155/256 (60%), Gaps = 11/256 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P +E P AE SHKL+++ GM+ Q S G+Y+ LPL + + + +IREE Sbjct: 1 MRQSRTFIPTTREVPSSAEATSHKLLIKAGMVKQVSAGVYTHLPLATRVIQKIEKVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P LQS + W +SGR++ G E++R+ DR + PT EE++ + Sbjct: 61 HEKIGAVELLMPILQSDEYWKKSGRWNKMGDELIRVTDRKNAGYALSPTAEEIICQTVSN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPR G++R +EF+MKD YSF TPE + +Y + + Sbjct: 121 MVTSYKQLPVNLYQIQTKFRDEIRPRLGLLRCKEFIMKDGYSFHDTPESLRETYKDYYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R LK ++A+SG IGG +HEF LA+ GE D +E +D+ Sbjct: 181 YSNIFDRFELKYRAVKADSGNIGGSYTHEFQALAEVGE----------DTIAYTEESDYA 230 Query: 241 DIISLNSIVEQ-WTAP 255 I ++VEQ +T P Sbjct: 231 ANIETAAVVEQNYTMP 246 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 68/159 (42%), Positives = 101/159 (63%), Gaps = 5/159 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG +F G YS M T+ A+G+ ++ MG YGIG RV++A+IE D KGI Sbjct: 403 AKGIEVGQVFELGKGYSESMDITYLDANGRANHFYMGCYGIGVTRVISAIIEQHSDDKGI 462 Query: 339 IWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP VAP+++ L +++K +QV E++YA+L+ G +V +DD E+ G +F AD Sbjct: 463 IWPKEVAPYQVHLVCVDVKKEEQV--KLSEELYAQLTAAGYEVLYDDRAERAGVKFNDAD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G PLQV+VG K + VE+K R T + D + +V+ Sbjct: 521 LIGIPLQVVVGKK-AGEGIVEVKERKTLEKVDTEVADVL 558 >gi|15605873|ref|NP_213250.1| prolyl-tRNA synthetase [Aquifex aeolicus VF5] gi|81816424|sp|O66690|SYP_AQUAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|2983039|gb|AAC06648.1| proline-tRNA synthetase [Aquifex aeolicus VF5] Length = 570 Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 112/225 (49%), Positives = 151/225 (67%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFL +E P++AE SH+L+L+ G I Q S GIY LP K L V +IIR+E Sbjct: 1 MRWSRYFLYTEKEEPKEAEAPSHRLLLKAGFIKQVSAGIYELLPPAYKVLKKVESIIRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L +LW E+GR+++YG+E+ +L DRN + GPTHEE +TD+ R Sbjct: 61 MDRSGAQELLLTVLNPKELWEETGRWETYGEELFKLKDRNGREYCLGPTHEEEITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ+KFRDE RPRFG++R+REF+MKDAYSFD + SY M + Sbjct: 121 VVRSYRQLPVILYQIQVKFRDEKRPRFGLIRAREFIMKDAYSFDTDDMSAMISYEAMKFA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCS 224 Y RIF++L L I A+ G IGG +SHEFI D GE +V +C Sbjct: 181 YQRIFNKLRLNVIMAEADVGQIGGKMSHEFIAFTDYGEAKVAYCE 225 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 72/167 (43%), Positives = 108/167 (64%), Gaps = 1/167 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+GHIF GT+YS PM A F DGK+ + MG YGIG R++AA++E HD KGI Sbjct: 404 RGLELGHIFLLGTRYSEPMKAYFTDRDGKEKPIIMGCYGIGVSRILAALVEQYHDDKGIK 463 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP VAPF++ +I + D+ ++ EK+Y + G DV +DD E G +FA ADL+G Sbjct: 464 WPTPVAPFELDIILLNTKDEEMKNVAEKLYLEAEEKGIDVIFDDREESPGFKFADADLVG 523 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 FP +++VG K V + KVE++ R TG + D+ +E+ I++ + ++ Sbjct: 524 FPYRIVVGKK-VKEGKVEVQSRHTGEKWDVEIEKAIDFVKEKIEEDK 569 >gi|116492650|ref|YP_804385.1| prolyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] gi|122265886|sp|Q03FS9|SYP_PEDPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116102800|gb|ABJ67943.1| Prolyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] Length = 571 Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 101/226 (44%), Positives = 145/226 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK + ++E P DAE+ SHK+MLR G I Q S G+Y++LPL K + + I+REE Sbjct: 1 MKQSKILISTVKEVPNDAEVLSHKMMLRAGYIRQISAGMYAYLPLAYKVISKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+EM P + A+LW +SGRY++YG+E+ + +R+D+ I GPTHEE MT + R Sbjct: 61 MEAIDAVEMLTPAVLPAELWKQSGRYETYGQELYKFKNRHDRDFILGPTHEETMTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP + YQIQ+K+RDE RPR+G++R REFLMKDAYSF E S+ + Sbjct: 121 EVKSYKKLPLSLYQIQMKYRDEDRPRYGLLRGREFLMKDAYSFHADEETLDQSFRDFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF R GL + ++G +GG S EF +A GE + S++ Sbjct: 181 YQNIFRRCGLNFREIVGDAGAMGGRDSKEFSAIASIGEDTIAYSEE 226 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 95/157 (60%), Gaps = 1/157 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIE+GHIF GTKYS + A +G+ V MG YGIG R+++AV E D G++ Sbjct: 406 KGIEIGHIFKIGTKYSEALDAKVLDENGRAIPVIMGCYGIGVSRLLSAVSEQQSDENGLV 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++AP+ + +I + A + + ++I L+K G DV DD E+ G +FA +DL+G Sbjct: 466 WPKNIAPYDVHVIPVNAKNAEQMEIADQINGELTKAGYDVLVDDRKERAGVKFADSDLIG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 PL+V +G K S+ VE+K R TG ++ + E+ N Sbjct: 526 IPLRVTIGKK-ASEGIVEVKLRKTGEAVEVKVAELNN 561 >gi|328957405|ref|YP_004374791.1| proline--tRNA ligase [Carnobacterium sp. 17-4] gi|328673729|gb|AEB29775.1| proline--tRNA ligase [Carnobacterium sp. 17-4] Length = 568 Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 148/224 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L++ P +AE+ SHK++LR G I Q S G+YS+LPL + L+ + I+REE Sbjct: 1 MKQSKLFIPTLRDVPNEAEVLSHKMLLRAGYIRQISSGVYSYLPLATRVLEKLKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P+L +LW ESGRY++YG++++ L DR+ + + GPTHEE T + R Sbjct: 61 FEKINAVEMLMPSLLPRELWEESGRYETYGEDLMTLQDRHGRDYLLGPTHEEAFTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ KFRDE RPR G++R REF+MKDAYSF + E +Y + Sbjct: 121 EITSYKRLPLSLYQIQTKFRDEKRPRSGLLRGREFIMKDAYSFHDSFESLDATYQDFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GL + ++G +GG S EF+ L+D GE + S Sbjct: 181 YTRIFERCGLDFRNIIGDAGAMGGSNSKEFMALSDIGEDTIVYS 224 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 64/160 (40%), Positives = 99/160 (61%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIE+GHIF GT+YS M+AT +G+ V MG YGIG R+++A+ E +G+ Sbjct: 403 AKGIEIGHIFKLGTRYSESMNATVLDNNGRSIPVVMGCYGIGVSRLLSAITEQQSSEEGL 462 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 WP +AP+++ LI N+KA DQV + ++Y L G V DD E++G +F +D Sbjct: 463 NWPRHLAPYELHLIPVNMKADDQV--NLSNELYTSLQNAGFSVLLDDRNERVGVKFKDSD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+G P+++ VG K ++ VE+K R TG ++ EE+I+ Sbjct: 521 LIGMPIRITVGKK-AQENIVELKLRKTGEALEVRTEELID 559 >gi|27904721|ref|NP_777847.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46396631|sp|Q89AN7|SYP_BUCBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|27904118|gb|AAO26952.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 574 Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 149/224 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ KY L+E P +++ SH LMLR G+I Q++ G Y WLP G + L V II+ E Sbjct: 1 MQARKYLFSTLKETPHNSDCISHALMLRAGIIRQNTSGTYIWLPTGLRILKKVIRIIKNE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+++P LQ +LW S R +YG+E+ ++ DR +K I GPTHEE++T ++ Sbjct: 61 MKQCGAMEIAMPFLQKKNLWDLSKRVITYGQELFQVTDRTNKKFILGPTHEEMITYFIKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE+RPRFG++R++EF+MKDAYSF + + +YN M+ + Sbjct: 121 ELQSYKQLPLILYQIQTKFRDEIRPRFGIIRTKEFMMKDAYSFHINMLSLEKTYNLMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y++IF ++ LK + A+SG +GG SHEF ++TGE + S Sbjct: 181 YIKIFKKMKLKFYAVEADSGLMGGLKSHEFQAPSNTGEDVIVLS 224 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 39/249 (15%) Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +L TG T+ F +DFP+ + DF +I+L + + S++ N K F+++ Sbjct: 329 ILNVTGTTKDFIGPINLDFPVIA---DFS-VINLEN--------FTIGSNITN-KYFNNM 375 Query: 272 PENKRVS-------------------------ARGIEVGHIFYFGTKYSLPMSATFKGAD 306 NK +S + IE+ HIF G KYS M+ + Sbjct: 376 NWNKDISIPQTYDIRYVLEGDPSPDGAGELKMQKSIEIAHIFQLGKKYSKIMNVKIQNKI 435 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDAC 365 GK + MG YGIG R++AA+IE ++D GIIWPDS+APF I++I + H + + Sbjct: 436 GKKDTLIMGCYGIGITRIIAAIIEQNNDKNGIIWPDSIAPFTIAIIPVCFHKSTLVKQQS 495 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 EKIY K D DD + + + +L+G P +I+ K + + VE + R + Sbjct: 496 EKIYNFCKKNNIDALLDDRKQNLSITLSEIELIGIPYSIIISEKLLKNDMVEYRERHKNV 555 Query: 426 REDMSLEEV 434 ++ ++ V Sbjct: 556 KKIINKNHV 564 >gi|300087319|ref|YP_003757841.1| prolyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527052|gb|ADJ25520.1| prolyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 573 Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 105/225 (46%), Positives = 150/225 (66%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F +E P +AE SH+L+LR GMI Q + G+YS+LP + + IIR+E Sbjct: 1 MRLSQLFGKTQREIPGEAETISHRLLLRAGMIAQLTAGVYSYLPPAWRTSRKIMDIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+++P LQ +LW +SGR ++G + +L DR + + GPTHEEV++D+ Sbjct: 61 MDAAGCQEITMPVLQPIELWQKSGRGAAFGDNLFQLTDRKEHTLALGPTHEEVVSDLASR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SYR+LP YQIQ K RDE RPR G++R REF+MKD YSFD G + SY +M + Sbjct: 121 YIQSYRDLPQRLYQIQTKLRDEPRPRGGLIRVREFIMKDMYSFDADEAGLEESYQRMVQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCS 224 Y I+ R GLK++ + A+SG IGG SHEF+VLA++GE +V FC+ Sbjct: 181 YKNIYRRCGLKAMAIEADSGAIGGKASHEFMVLAESGEDEVIFCA 225 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 63/167 (37%), Positives = 93/167 (55%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RGIEVGH+F GT + A + A+G MG YGIG R++AA IE +HD KG Sbjct: 398 ATRGIEVGHVFKLGTFLAETFGAVYTDAEGNQKPCIMGCYGIGIGRLLAAAIEQNHDDKG 457 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP +AP+++ L + ++ R A EK+Y L+ G +V +DD E G +F ADL Sbjct: 458 IIWPMPIAPWQVHLTGLGLENEPVRAAAEKLYGELTSAGIEVLYDDRPESPGVKFNDADL 517 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 LG PL++ + + + VE+K R E + +EV+ S+ Sbjct: 518 LGMPLRLTISPRSMDKGSVEVKQRAEKAFELVPADEVVEVTRKLVSD 564 >gi|315930573|gb|EFV09608.1| Proline-tRNA ligase [Campylobacter jejuni subsp. jejuni 305] Length = 220 Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 101/218 (46%), Positives = 142/218 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +I R+GL + A+SG IGG S EF+VLA GE Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGE 218 >gi|33866303|ref|NP_897862.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8102] gi|81835080|sp|Q7U5D6|SYP_SYNPX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33639278|emb|CAE08286.1| Prolyl-tRNA synthetase [Synechococcus sp. WH 8102] Length = 593 Score = 219 bits (558), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 108/229 (47%), Positives = 145/229 (63%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +AEI SH+L+LR G I + GIY++LP+ K L + IIREE Sbjct: 1 MRVSRLMLVTLRDVPAEAEITSHQLLLRGGFIRRVGSGIYAYLPMMWKVLQRITTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 NR GA+E +P L ++LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 MNRAGALETLLPQLHPSELWQRSGRWQGYTAGEGIMFHLEDRQGRELGLGPTHEEVITSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSF + +Y M Sbjct: 121 AGELLRSYRQLPVNLYQVQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEADLQATYAVM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y RIF R GL+++P+ A+SG IGG S EF+V A+ GE + S D Sbjct: 181 DQAYRRIFERCGLEAVPVDADSGAIGGAASQEFMVTAEAGEDLILISDD 229 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/251 (32%), Positives = 118/251 (47%), Gaps = 29/251 (11%) Query: 185 FHRLGLKSIPMRAESGPIGGDLSHE-----------FIVLADTGET---QVFCSKDFMDF 230 R G+ +IP G IG DL+ + F+ LADT T Q C + D Sbjct: 335 LQRQGINTIPF----GFIGPDLADKVLADASSWTTSFLRLADTTATELEQFHCGANAEDQ 390 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + D+ E A VHN P+ + RGIEVGHIF Sbjct: 391 H--RSHCSWGDLGGAPQ-GEDLRKARAGERCVHN-------PDARLQEKRGIEVGHIFQL 440 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 G KYS + F +G+D MG YGIG R+ A +E HD GI WP ++AP+++ Sbjct: 441 GRKYSQALDCCFTNENGRDEPFWMGCYGIGVSRLAQAAVEQHHDDGGIRWPAAIAPYEVI 500 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 ++ HD D + +YA L + G DV DD E+ G +F ADL+G P ++++G + Sbjct: 501 VVIANNHDDAQTDLGDTVYATLLEAGIDVLLDDRKERAGVKFKDADLIGIPWRLVIG-RD 559 Query: 411 VSDSKVEIKHR 421 ++ VE+ R Sbjct: 560 AAEGTVELVQR 570 >gi|222874274|gb|EEF11405.1| predicted protein [Populus trichocarpa] Length = 191 Score = 219 bits (558), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 98/191 (51%), Positives = 138/191 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMTRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A++W E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVEVTMPVVQPAEMWEETGRFEKMGPELLRIKDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD + ++ SY M + Sbjct: 121 ELKSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDKDRDTAQISYQTMRAA 180 Query: 181 YLRIFHRLGLK 191 Y RIF R GL+ Sbjct: 181 YKRIFDRFGLQ 191 >gi|322379566|ref|ZP_08053903.1| prolyl-tRNA synthetase [Helicobacter suis HS1] gi|321147960|gb|EFX42523.1| prolyl-tRNA synthetase [Helicobacter suis HS1] Length = 576 Score = 219 bits (558), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 144/226 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F P L+E P+DA + SH+ +++ G I Q GIYS+LPLGQK L + II+EE Sbjct: 1 MRYSTLFAPSLKEPPKDAVLKSHQFLIQAGFIKQIGSGIYSFLPLGQKVLSKIKNIIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E + A LW +S R YG+E+L DR + + GPTHEEV ++ + Sbjct: 61 MDKHGAQECMFNFITPASLWEQSKRLHKYGQELLVFKDRKNYPFVLGPTHEEVAVEVVKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQI KFRDE+RPRFG+MR+REF+MKD YSF ++ + + +N M Sbjct: 121 FVQSYKQLPLHLYQIHTKFRDEIRPRFGLMRAREFIMKDGYSFHVSTQDLEREFNAMEQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF RLGL ++A+SG IGG+ S EF+VLA+ GE + + Sbjct: 181 YSRIFTRLGLNFRAVQADSGAIGGNKSKEFVVLAECGEDSIIACTN 226 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 68/130 (52%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + IEVGHIF G Y+ + A F +G+ + +MG YGIG R++ A++E D KG + Sbjct: 416 KSIEVGHIFQLGNTYAKNLGANFLNTEGEATFFEMGCYGIGVSRLLPAILEQKSDSKGCV 475 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W APF++ L+ + D + +Y L + G DV DD + G++ + +G Sbjct: 476 WSLESAPFEVVLVVANSKDTELIALAQTLYQELLEAGVDVLLDDRNLRFGAKMIDFERIG 535 Query: 400 FPLQVIVGSK 409 +I+G + Sbjct: 536 SSYALIIGKE 545 >gi|116491012|ref|YP_810556.1| prolyl-tRNA synthetase [Oenococcus oeni PSU-1] gi|122276806|sp|Q04F81|SYP_OENOB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116091737|gb|ABJ56891.1| Prolyl-tRNA synthetase [Oenococcus oeni PSU-1] Length = 570 Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 110/248 (44%), Positives = 155/248 (62%), Gaps = 12/248 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +E P +A++ SH MLR G I Q + GIY++LPL + ++ + +IIREE Sbjct: 1 MKQSKIFIPTEKEVPAEAQVKSHIFMLRAGFIRQVAGGIYAYLPLANRIINKIESIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR A EM +P + A+LW ESGR+ +YG +M +L DR+D+ I PTHEE T I Sbjct: 61 MNRIDANEMLMPEMIPAELWKESGRFYTYGPQMYQLKDRHDREFIMAPTHEETFTKIISD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDELRP+ G++R REF+MKDAYSF +G +Y+ + + Sbjct: 121 EIKSYKKLPLILYQIQQKFRDELRPKNGLLRGREFIMKDAYSFSSDQKGLDDAYDLIESA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE------------TQVFCSKDFM 228 Y RIF R+GL + A+SG +GG S EF +A TGE + +++F Sbjct: 181 YKRIFDRVGLDYREIIADSGSMGGKDSAEFQAIAATGEDIIAYSNSGKYAANIEMAEEFF 240 Query: 229 DFPIPSEN 236 + IP E+ Sbjct: 241 EKKIPDED 248 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 96/169 (56%), Gaps = 1/169 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K V +GIE+GHIF GT Y+ M + GK + MG YGIG R+++A+ E S+D Sbjct: 400 KLVFTKGIEIGHIFKLGTFYTSKMGGQIQNEKGKLSDIIMGCYGIGISRLLSAIAEQSND 459 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IWP +VAPF + LI + ++ + ++I L + G +V DD E+ G +FA Sbjct: 460 PKGFIWPKAVAPFNVHLITMNTKNESQVNLTKQIDKNLQEAGFEVLVDDRKERPGVKFAD 519 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +DL+G P++V+VG + VE+K R D+S + +I + + + Sbjct: 520 SDLIGIPIRVVVGRQ-ADQQIVEVKARGQESTNDVSTDNLIAFLKDKLN 567 >gi|125980520|ref|XP_001354284.1| GA11463 [Drosophila pseudoobscura pseudoobscura] gi|54642590|gb|EAL31337.1| GA11463 [Drosophila pseudoobscura pseudoobscura] Length = 462 Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 138/450 (30%), Positives = 228/450 (50%), Gaps = 48/450 (10%) Query: 2 RRSKYFLPILQENPRDAEIA-------SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G++ S G Y +P+ Q+++D Sbjct: 3 KASRLFWPALV-TPKNAVVKQTEQLSRSQKLLTELGLVKSGSNGTYQIMPIAQRSVDKFI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 ++ R G ++S+P L LW ++GR + E + DR+ K + PTHEE + Sbjct: 62 DLVDGNMKRAGGQKISLPILTPTGLWKKTGRLEGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR +P YQI KFRDEL+ RFG+MR++EFLMKD Y+FD++ E ++ + Sbjct: 122 TAMLATTAPISYRQMPLRLYQIGPKFRDELKSRFGLMRAKEFLMKDMYTFDVSEETARGT 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y+ + +Y R+F +L + + + A +G +GG LSHE+ ++ GE Sbjct: 182 YSVVSEAYDRLFKQLEVPFVKVNAATGMMGGSLSHEYHYVSPVGE--------------- 226 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL-----FDSLPENKRVSARGIEVGHIF 288 +++++ + YA ++V + K+ S + RG+EV H F Sbjct: 227 ------------DTLLQCSSCGYAGNAEVLDSKVEASTDCPSCHSSHLSQVRGVEVAHTF 274 Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 G KYS P+ ATF GK + MG YGIG RV+A+ +E + + WP +AP+ Sbjct: 275 LLGEKYSKPLGATFLNTSGKPQSLVMGCYGIGITRVLASALEVLSTEQELRWPKLLAPYD 334 Query: 349 ISLINIK--AHDQVCRDACE-KIYARLSKVGCD--VFWDDMGE-QIGSQFAVADLLGFPL 402 + LI K + +Q + E ++ + K+ D + DD E IG + A LG PL Sbjct: 335 VCLIGPKQGSKEQQPAEVIENELLQHIGKICGDQELLHDDRKELTIGKRLLDAKRLGHPL 394 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 ++VG+ V +++ ++G E M LE Sbjct: 395 TIVVGATAVQQEAPKLELHVSG-GEKMELE 423 >gi|116513081|ref|YP_811988.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] gi|123025108|sp|Q02VZ7|SYP_LACLS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116108735|gb|ABJ73875.1| Prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] Length = 616 Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 100/215 (46%), Positives = 142/215 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L++R G + Q S GIY++LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLMRAGYVRQVSAGIYAYLPLANRVLEKLKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ P+L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE MT + R Sbjct: 61 FDEIGAVELLAPSLLTADLWRESGRYETYGEDLYKLKNRDSSDFILGPTHEETMTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPR+G++R REFLMKD YS+ + +Y S Sbjct: 121 EITSYKKLPLNVYQIATKFRDEKRPRYGLLRGREFLMKDGYSYHADQDSLDETYLDYKKS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 Y +IF R GL P+ A++G +GG S EFI + D Sbjct: 181 YEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITD 215 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 96/171 (56%), Gaps = 14/171 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+Y+ M+A A+G+ + MG YGIG R+++A++E Sbjct: 440 ARGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSRLLSAILEQFARIYVE 499 Query: 332 ---SHDGK---GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + K I +P +APF I L+ + D+ + ++ +L G V DD Sbjct: 500 KTPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+ G +FA +DL+G P++V +G K ++ VE+K R TG +++ +E++N Sbjct: 560 ERAGVKFADSDLIGLPVRVTIGKK-AAEGIVEVKIRATGEVVEINKDELVN 609 >gi|194865182|ref|XP_001971302.1| GG14505 [Drosophila erecta] gi|190653085|gb|EDV50328.1| GG14505 [Drosophila erecta] Length = 458 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 143/455 (31%), Positives = 226/455 (49%), Gaps = 44/455 (9%) Query: 2 RRSKYFLPILQENPRDAEIA-------SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G++ S G Y +P+ Q+++D Sbjct: 3 KASRIFCPALI-TPKNAVVKQTEQLSRSQKLLTELGLVKSGSNGTYQIMPMAQRSVDKFI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ + G ++++P L LW ++GR + E + DR+ K + PTHEE + Sbjct: 62 DLVQSNMLQAGGQKITLPILTPTGLWRKTGRLEGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP +QI KFRDEL+ RFG+MR++EFLMKD YSFD+ E ++ + Sbjct: 122 TAMLATTSPISYRQLPLRLFQIGPKFRDELKTRFGLMRAKEFLMKDMYSFDVCEETARET 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y+ + +Y R+F +L + + + A +G +GG +SHE+ ++ GE + K F Sbjct: 182 YSVVNAAYDRLFKQLEVPFVKVNAATGMMGGSVSHEYHYVSPVGEDNLLQCKS-CGFAGN 240 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 SE ++ P ++SD+ RG+EV H F G K Sbjct: 241 SE-----------VVMAPANCPSCSSSDLKE--------------VRGVEVAHTFLLGDK 275 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 YS P+ ATF GK + MG YGIG RV+AA +E + WP +AP+ + LI Sbjct: 276 YSKPLGATFLNTKGKPQSLVMGCYGIGITRVIAAALEVLSSDNELHWPKLLAPYDVCLIG 335 Query: 354 IKAHDQVCRDACEKIYARLSKVG--C---DVFWDDMGE-QIGSQFAVADLLGFPLQVIVG 407 K + +A L VG C ++ DD E IG + A LG PL ++VG Sbjct: 336 PKQGSKEQPEAEVIENELLLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTIVVG 395 Query: 408 SKFV-SDS-KVEIKHRLTGIREDMSLEEVINYASH 440 +K + DS K+E+ H G ++ L E + + Sbjct: 396 AKAIRQDSPKLEV-HTSKGETLELDLSETLKLVAE 429 >gi|154175003|ref|YP_001408388.1| prolyl-tRNA synthetase [Campylobacter curvus 525.92] gi|166980112|sp|A7GYU6|SYP_CAMC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|112802606|gb|EAT99950.1| prolyl-tRNA synthetase [Campylobacter curvus 525.92] Length = 567 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 97/224 (43%), Positives = 139/224 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK++ P +E P+DA + SH ++R G + Q G+Y++LPLG+ LD + +++EE Sbjct: 1 MRFSKFYAPTTKEAPKDASLPSHIFLVRGGFVEQIGSGLYNFLPLGKMMLDKITKVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G +E+S + S +LW +SGR++ +GKE+LR DR + + PT+EE + R Sbjct: 61 MDAAGVLEVSFSVVTSGELWKQSGRFNVFGKELLRFKDRKENDFVLSPTNEEAAVALVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG++R REF MKDAYSF K ++ M + Sbjct: 121 KVTSYKQLPLNIYQINTKFRDEARPRFGLLRGREFTMKDAYSFHANEADMKREFDLMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF RLGL + A+SG IGG S EF+VLA GE + C Sbjct: 181 YSKIFTRLGLNFRAVEADSGAIGGSGSKEFMVLAKNGEDDILCC 224 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/253 (29%), Positives = 120/253 (47%), Gaps = 29/253 (11%) Query: 199 SGPIGGDLSHEFIVLADTGETQVFCSKD-----FMDFPIPSENTD-FDDIISLNSIVEQW 252 GP+G +I G+TQ+ C + F+ + S N + F D++S+ + Sbjct: 336 CGPVGLSGVDFYIDNELKGQTQMICGANEKDYHFVGVSVSSFNDERFKDLVSVQA----- 390 Query: 253 TAPYAATSDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 D P+ K ++GIEVGHIF G KYS M ATF +GK Sbjct: 391 ---------------GDICPKCGGKLELSKGIEVGHIFQLGYKYSSAMGATFLDENGKAR 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 MG YGIG R++A ++E+SHD +G +W PF+ ++ D+ K+Y Sbjct: 436 PFLMGCYGIGVSRLIAVMVEASHDDRGCVWKKECTPFECEIVISNLKDEAGVKFATKLYE 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L +G V DD E+ G + +LLGFP +IVG K + + +VE+ R ++E + Sbjct: 496 NLRNLGLCVLLDDRNERFGVKMNDFELLGFPYAIIVG-KGLENGEVELITRDGLVKEVVK 554 Query: 431 LEEVINYASHRFS 443 +E+++ + Sbjct: 555 KDEILSVLKEKLC 567 >gi|315638151|ref|ZP_07893333.1| proline--tRNA ligase [Campylobacter upsaliensis JV21] gi|315481687|gb|EFU72309.1| proline--tRNA ligase [Campylobacter upsaliensis JV21] Length = 568 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 101/225 (44%), Positives = 142/225 (63%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+++ P +E P+DA + SH + R G I Q+ G+Y++LPLG+ + +II+EE Sbjct: 1 MKFSQFYAPTFKEAPKDATLPSHIFLTRAGFIEQNGSGLYNFLPLGKMVYSKIESIIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E S+ A W ESGRY+ +GKE+LR DR + + GPTHEE M ++ ++ Sbjct: 61 MDKAGALETSLSFTTPASFWRESGRYNVFGKELLRFKDRKENDFVLGPTHEEAMLNVVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+ LKFRDE RPRFG++R REF+MKDAYSF E + M + Sbjct: 121 KITSYKQLPLNLYQVGLKFRDEARPRFGLLRCREFVMKDAYSFHKDEEDLTREFENMQGT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCS 224 Y +I RLGL + A+SG IGG S EF+VLA GE + CS Sbjct: 181 YSKILKRLGLDFRVVEADSGAIGGSGSKEFMVLAQNGEDDILLCS 225 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 3/163 (1%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF GTKYS M ATF +GK MG YG+G R+VA +E+S D Sbjct: 401 KLTKSKGIEVGHIFKLGTKYSAAMQATFLDENGKAKPFVMGCYGMGVSRLVAVAVEASFD 460 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 +GI+W ++++PFK+ +I D+ + +Y L K+G DV DD E+ G + Sbjct: 461 ERGIVWQEALSPFKLVIILSNIKDEKALNLGISLYEDLRKLGIDVLLDDRNERYGVKMND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTG---IREDMSLEEV 434 +L+GF +I+G ++ +K + G ++ D +L E+ Sbjct: 521 FELMGFNYALIIGKGLENNELELVKRKDLGKIKLKADTALTEL 563 >gi|29376876|ref|NP_816030.1| prolyl-tRNA synthetase [Enterococcus faecalis V583] gi|227519897|ref|ZP_03949946.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|81838863|sp|Q831W7|SYP_ENTFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118138617|pdb|2J3L|A Chain A, Prolyl-Trna Synthetase From Enterococcus Faecalis Complexed With A Prolyl-Adenylate Analogue ('5'-O-(N-(L-Prolyl)- Sulfamoyl)adenosine) gi|118138618|pdb|2J3L|B Chain B, Prolyl-Trna Synthetase From Enterococcus Faecalis Complexed With A Prolyl-Adenylate Analogue ('5'-O-(N-(L-Prolyl)- Sulfamoyl)adenosine) gi|118138619|pdb|2J3M|A Chain A, Prolyl-Trna Synthetase From Enterococcus Faecalis Complexed With Atp, Manganese And Prolinol gi|118138620|pdb|2J3M|B Chain B, Prolyl-Trna Synthetase From Enterococcus Faecalis Complexed With Atp, Manganese And Prolinol gi|29344341|gb|AAO82100.1| prolyl-tRNA synthetase [Enterococcus faecalis V583] gi|227072691|gb|EEI10654.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0104] Length = 572 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 143/226 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE R R G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 226 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 3/168 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ V A +GIE+GHIF GT+YS M AT +G++ V MG YGIG R+++ Sbjct: 391 DPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLS 450 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E + D +GI WP +APF + ++ + D+ +++ A +++ G +V DD E Sbjct: 451 AIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNE 510 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ Sbjct: 511 RAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEEL 557 >gi|297191728|ref|ZP_06909126.1| prolyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|297151037|gb|EDY65325.2| prolyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 691 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 116/298 (38%), Positives = 169/298 (56%), Gaps = 22/298 (7%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + +++ GI+SWLPLG++ L+NV ++REE Sbjct: 133 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRNAAGIWSWLPLGKRVLENVTRVVREEM 192 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR++ YG E+ RL DR + GPTHEE+ T + + Sbjct: 193 DAIGAQEVLLPALLPKEPYEATGRWEEYGAELFRLKDRKGADYLLGPTHEEIFTQLVKDQ 252 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF MKD+YSFD + EG SY +Y Sbjct: 253 CTSYKDLPVILYQIQTKYRDEARPRSGILRGREFQMKDSYSFDTSDEGLAESYALHREAY 312 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK----------DFMDF 230 +RIF RLGLK + A SG +GG S EF+ A GE T V+C F Sbjct: 313 VRIFERLGLKHKIVSAVSGAMGGSASEEFLAPAPAGEDTFVYCPSCDYAANTEAVTFALA 372 Query: 231 PI------PSENTDFDDIISLNSIVEQWTAPYAAT-----SDVHNEKLFDSLPENKRV 277 P+ P E D D ++ ++ + P +AT V E + +P N+ V Sbjct: 373 PVEGAEHGPVEELDTPDTPTIETLADHLGVPASATLKNLLVKVDGEIVAVGVPGNREV 430 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 4/157 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G +GK V MGSYG+G R VAA+ E + D +G+ Sbjct: 533 RAIEIGHIFQLGRKYADAFQLDVLGQNGKPVRVTMGSYGVGVSRAVAALAEQTADEQGLC 592 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP +AP + + + A + + + +L G V DD G G +F A+L+ Sbjct: 593 WPREIAPADVHV--VAAGKALQTELALDVAEQLGAAGLRVLVDDRAGVSPGVKFTDAELI 650 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P +++V + ++ +E+K R TG RE++++ + + Sbjct: 651 GVP-KILVAGRRSAEGVLELKDRRTGEREELTVADAV 686 >gi|297562530|ref|YP_003681504.1| prolyl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846978|gb|ADH68998.1| prolyl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 582 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 144/218 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DAE+ SHKL++R G + + + G+Y+WLPLG+ L+NV I+REE Sbjct: 3 LRMSTLFLRTLREDPADAEVPSHKLLVRGGFVRRAAPGVYTWLPLGKIVLENVARIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P L + + +GR++ YG + RL DR + GPTHEE+ T + + Sbjct: 63 MDAIGAQEVLLPALLPREYYEATGRWEEYGDTLFRLKDRKGADYLLGPTHEELFTLLVKG 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P T YQIQ KFRDE RPR GV+R REF MKD+YSFD+ EG + SY + Sbjct: 123 EYSSYKDFPVTLYQIQEKFRDEARPRAGVLRGREFHMKDSYSFDIDDEGLRASYADHRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y+R+F RLGL+ + + A SG +GG S EF+ +A TGE Sbjct: 183 YIRVFDRLGLEYVIVSATSGAMGGSASEEFLAVAPTGE 220 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 74/184 (40%), Positives = 103/184 (55%), Gaps = 6/184 (3%) Query: 258 ATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T DV + D P+ + +ARGIE+GHIF G KY+ G DGK + MG Sbjct: 396 GTIDVAEVRDGDPSPDGRGTLYTARGIEIGHIFQLGRKYTDAFQVDALGPDGKPRRITMG 455 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R VAAV+E SHD KG++WP VAP + ++ +Q+ + +I L Sbjct: 456 SYGIGVSRAVAAVVEQSHDDKGVVWPREVAPADVHVVGTGKGEQI--EEALRIARELEAR 513 Query: 376 GCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD G G +F A+LLG P VIVG + + D VE++ R TG RE+++L E+ Sbjct: 514 GLRVLVDDRKGVSPGVKFTDAELLGVPTGVIVG-RGLKDGLVELRDRATGDREEVALAEI 572 Query: 435 INYA 438 ++ A Sbjct: 573 VDRA 576 >gi|163791590|ref|ZP_02185991.1| prolyl-tRNA synthetase [Carnobacterium sp. AT7] gi|159873139|gb|EDP67242.1| prolyl-tRNA synthetase [Carnobacterium sp. AT7] Length = 568 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 148/224 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L++ P +AE+ SHK++LR G I Q S G+YS+LPL + ++ + I+REE Sbjct: 1 MKQSKLFIPTLRDVPNEAEVLSHKMLLRAGYIRQISSGVYSYLPLANRVIEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P+L +LW ESGRY++YG ++++L DR+ + + GPTHEE T + R Sbjct: 61 FEKIDAVEMLMPSLLPRELWEESGRYETYGDDLMKLQDRHGRDYLLGPTHEEAFTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ KFRDE RPR G++R REF+MKDAYSF + E +Y + Sbjct: 121 EITSYKRLPLSLYQIQTKFRDEKRPRSGLLRGREFIMKDAYSFHDSYESLDETYLDFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y RIF R GL + ++G +GG S EF+ ++D GE + S Sbjct: 181 YTRIFERCGLDFRSIIGDAGAMGGSNSKEFMAISDIGEDTIVYS 224 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/160 (38%), Positives = 98/160 (61%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIE+GHIF GT+YS M+AT +G+ V MG YGIG R+++A+ E +G+ Sbjct: 403 AKGIEIGHIFKLGTRYSEAMNATVLDNNGRSIPVVMGCYGIGVTRLLSAITEQQATEEGL 462 Query: 339 IWPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 WP ++PF++ L +N+KA DQV ++Y L G V DD E++G +F +D Sbjct: 463 NWPRHLSPFELHLVPVNMKADDQVT--LSNELYETLQHAGFSVLLDDRNERVGVKFKDSD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+G P+++ VG K ++ VE+K R TG ++ +E+++ Sbjct: 521 LIGLPIRITVGKK-AQENIVELKLRKTGEALEVRADELVD 559 >gi|254392125|ref|ZP_05007314.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294815425|ref|ZP_06774068.1| Prolyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064] gi|326443777|ref|ZP_08218511.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|197705801|gb|EDY51613.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294328024|gb|EFG09667.1| Prolyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064] Length = 566 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 112/276 (40%), Positives = 159/276 (57%), Gaps = 19/276 (6%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + +++ GI+SWLPLG+K L+NV ++REE Sbjct: 7 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRNAAGIWSWLPLGKKVLENVTRVVREEM 66 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR+D YG E+ RL DR + GPTHEE+ T + + Sbjct: 67 DAIGAQEVLLPALLPKEPYEITGRWDEYGAELFRLKDRKGAEYLLGPTHEEIFTQLVKDQ 126 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF MKD+YSFD T EG SY +Y Sbjct: 127 CSSYKDLPVILYQIQTKYRDEARPRSGILRGREFQMKDSYSFDTTDEGLAESYALHREAY 186 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE------------------TQVFC 223 +RIF RLGL + A SG +GG S EF+ A GE T V Sbjct: 187 IRIFRRLGLDHRIVSAVSGAMGGSASEEFLAPAAAGEDTFVHCPSCDYAANTEAVTYVAA 246 Query: 224 SKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 + + +D P E D D ++ ++ E P +AT Sbjct: 247 APEAVDHPA-VELLDTPDTPTIETLAEHLGVPASAT 281 Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 4/157 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G +GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 407 RAIEIGHIFQLGRKYADAFQLDVLGQNGKPTRVTMGSYGIGVSRAVAALAEQTADEKGLC 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLL 398 WP +AP + ++ Q+ + ++ +L+ G V D+ G G +F A+L+ Sbjct: 467 WPAEIAPADVHVVAAGKAVQI--ELALEVADQLAAAGLRVLVDERPGVSPGVKFTDAELI 524 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++V + ++ VE+K R TG RE++ + E + Sbjct: 525 GVP-TILVAGRRSAEGVVELKDRRTGEREELPVAEAV 560 >gi|116629465|ref|YP_814637.1| prolyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|282850819|ref|ZP_06260193.1| proline--tRNA ligase [Lactobacillus gasseri 224-1] gi|311110887|ref|ZP_07712284.1| proline--tRNA ligase [Lactobacillus gasseri MV-22] gi|122273597|sp|Q044C3|SYP_LACGA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116095047|gb|ABJ60199.1| Prolyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|282557771|gb|EFB63359.1| proline--tRNA ligase [Lactobacillus gasseri 224-1] gi|311066041|gb|EFQ46381.1| proline--tRNA ligase [Lactobacillus gasseri MV-22] Length = 565 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 106/225 (47%), Positives = 141/225 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MNNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 YL+IF+R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YLKIFNRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 81/222 (36%), Positives = 110/222 (49%), Gaps = 16/222 (7%) Query: 200 GPIGGDLSHEFIVLADT--GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 GPIG D + + IV +T G V + D+ + N D D ++ + TA Sbjct: 334 GPIGADWADK-IVADETVKGLYNVVVGANETDYQYQNANLDRD--FKVDEFADIRTANEG 390 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 V D LP S IEVGHIF GT Y+ M A F +GK V MGSY Sbjct: 391 ELDPV------DHLPLKFTTS---IEVGHIFKLGTYYTKTMGADFLDNNGKAKPVIMGSY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A +E GI WP +APF + LI +K D+ + EK+ LS Sbjct: 442 GIGVTRMLSAAVEQHLTENGIAWPKEIAPFDVHLIQMKMKDEAQTELAEKLEKELS-TKY 500 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 DV +DD E+ G +F ADL+G PL++ +G K D VE+K Sbjct: 501 DVLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVK 541 >gi|227529103|ref|ZP_03959152.1| prolyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540] gi|227350947|gb|EEJ41238.1| prolyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540] Length = 580 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 140/218 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +E P DAE SHK+M+R G I+Q S G++++LP+ + + V IIR+E Sbjct: 1 MQQSKILIPTKKEAPSDAEALSHKMMVRAGYIYQVSAGVWAYLPMAYRVIRKVENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P L ADLW ESGRY+SYG + +L DR D+ I GPTHEE T++ R Sbjct: 61 MEKAGAVEMMMPALLPADLWKESGRYESYGDNLFKLKDRRDRDFIMGPTHEETFTEVIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE RPR+G++R +EF M D YSF G +Y+ + Sbjct: 121 SIKSYKKLPLVVYQLQDKFRDEDRPRYGILRGKEFEMLDGYSFSADQAGLDQAYDLQARA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y IF R+GL + A+SG +GG S EF A+ GE Sbjct: 181 YRNIFDRIGLDYKVILADSGTMGGKNSQEFSAPAEVGE 218 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 66/156 (42%), Positives = 94/156 (60%), Gaps = 1/156 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIE+GHIF GT YS + A +G+ V MGSYGIG R+++AV E + D G++W Sbjct: 408 GIEIGHIFKLGTHYSKKLGAQVLDNNGRLVDVIMGSYGIGVSRLLSAVAEQTADDNGLVW 467 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 PDS+APF + +I + A + ++ L K G DV DD E+ G +FA +DL+G Sbjct: 468 PDSIAPFDVHVIPVNAKKADQMEMANELTVALEKAGYDVLVDDRKERAGVKFADSDLIGI 527 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 P+++ VG K SD VE+K R TG ++ EEV+N Sbjct: 528 PIRITVGKK-ASDGIVEVKIRKTGETVEVKTEEVVN 562 >gi|116333948|ref|YP_795475.1| prolyl-tRNA synthetase [Lactobacillus brevis ATCC 367] gi|122269368|sp|Q03QS8|SYP_LACBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116099295|gb|ABJ64444.1| Prolyl-tRNA synthetase [Lactobacillus brevis ATCC 367] Length = 569 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 142/224 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DAE SH++MLR G I Q + G+Y++LPL + L N+ IIREE Sbjct: 1 MKQSQLLIPTLKEVPNDAEALSHQMMLRAGYIRQVTAGMYAYLPLAFRVLTNIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P + A LW ESGRY++YG + + +R+D I PTHEE T + R Sbjct: 61 MEKINAVEMLMPAVLPASLWQESGRYETYGPNLFKFKNRHDSDFILAPTHEETFTMLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPR+G++R REF+MKDAYSF L+ E YN+M + Sbjct: 121 AIKSYKRLPLVMYQIQPKYRDEDRPRYGLLRGREFIMKDAYSFSLSDEDLDRIYNQMEQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R+GL + + G +GG S EF +A GE + S Sbjct: 181 YENIFDRIGLNYRAIVGDGGAMGGKDSKEFSAIAPVGEDTIVYS 224 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 63/167 (37%), Positives = 97/167 (58%), Gaps = 5/167 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIE+GHIF GT+YS + AT G+ V MGSYGIG R+++A+ E D KG++ Sbjct: 404 KGIEIGHIFKLGTRYSDALGATVLDEGGRQKPVVMGSYGIGVSRLLSAIAEQQADDKGLV 463 Query: 340 WPDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP ++APF I L +N+K DQ ++ +L+ G + DD E+ G +FA +DL Sbjct: 464 WPRNIAPFDIHLVPVNLKKDDQA--QLTSELEEQLTAKGYRILTDDRKERPGVKFADSDL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P+++ +G K + VEIK R TG ++ +EV + F + Sbjct: 522 MGIPVRITIGKK-AGEGIVEIKIRKTGETVEVIKDEVASTVEILFKD 567 >gi|77360564|ref|YP_340139.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] gi|76875475|emb|CAI86696.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] Length = 544 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 102/194 (52%), Positives = 132/194 (68%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI + + G+Y+WLP G + L V I+REE N+ AIEM +P +Q ADLW ESGR+D +G Sbjct: 1 MIRRVASGLYTWLPTGLRVLRKVENIVREEMNKANAIEMLMPVIQPADLWEESGRWDEFG 60 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM 150 E++R DR+++ GPTHEEV+TD R I SY+ LP + YQIQ K RDE RPRFGVM Sbjct: 61 PELMRFTDRHNRTFALGPTHEEVITDFVRKEISSYKQLPISLYQIQTKVRDERRPRFGVM 120 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R+REF MKDAYSF L+ E +Y M +Y IF RL L P+ A++G IGG +SHEF Sbjct: 121 RAREFTMKDAYSFHLSDECLDATYQVMHKAYCNIFERLNLDYRPVIADTGSIGGSVSHEF 180 Query: 211 IVLADTGETQVFCS 224 VLA++GE + S Sbjct: 181 HVLAESGEDAIAFS 194 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 93/158 (58%), Gaps = 1/158 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M A GK+ + MG YGIG R+VAA IE ++D GII Sbjct: 379 RGIEVGHIFQLGTKYSQAMKAGVLNESGKNQIMTMGCYGIGVSRIVAAAIEQNNDQYGII 438 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +APF ++++ + H D +Y L G DV +DD E+ G F +L+ Sbjct: 439 WPQPIAPFDLAIVPMNMHKSHRIPDIATNLYQGLKDAGLDVLFDDRKERPGVMFNDMELI 498 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P +++G + + ++KVE+K+R TG + + ++ I+ Sbjct: 499 GVPFTLVIGERNLDENKVELKNRRTGEKLMIDIDTAID 536 >gi|300361905|ref|ZP_07058082.1| proline--tRNA ligase [Lactobacillus gasseri JV-V03] gi|300354524|gb|EFJ70395.1| proline--tRNA ligase [Lactobacillus gasseri JV-V03] Length = 565 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 106/225 (47%), Positives = 141/225 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MNNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDQQFDDQKGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 YL+IF+R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YLKIFNRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 107/221 (48%), Gaps = 14/221 (6%) Query: 200 GPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAA 258 GPIG D + + + + V + D+ + N D D ++ + TA Sbjct: 334 GPIGADWADKIVADETVKDLYNVVVGANETDYQYQNANLDRD--FKVDEFADIRTANEGE 391 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 V D LP S IEVGHIF GT Y+ M A F +GK V MGSYG Sbjct: 392 PDPV------DHLPLKFTTS---IEVGHIFKLGTYYTKTMGADFLDNNGKAKPVIMGSYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A +E GI WP +APF I LI +K D+ + EK+ LS D Sbjct: 443 IGVTRMLSAAVEQHLTKNGIAWPKEIAPFAIHLIQMKMKDETQTELAEKLEKELS-TKYD 501 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V +DD E+ G +F ADL+G PL++ +G K D VE+K Sbjct: 502 VLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVK 541 >gi|125625170|ref|YP_001033653.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363] gi|152112925|sp|A2RNT2|SYP_LACLM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|124493978|emb|CAL98976.1| ProS protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071979|gb|ADJ61379.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000] Length = 616 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 142/215 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L++R G + Q S GIY++LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLMRAGYVRQVSAGIYAYLPLANRVLEKLKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ P+L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE MT + R Sbjct: 61 FDEIGAVELLAPSLLTADLWRESGRYETYGEDLYKLKNRDSSDFILGPTHEETMTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPR+G++R REFLMKD YS+ + +Y + Sbjct: 121 EITSYKKLPLNVYQIATKFRDEKRPRYGLLRGREFLMKDGYSYHADQDSLDETYLDYKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 Y +IF R GL P+ A++G +GG S EFI + D Sbjct: 181 YEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITD 215 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 96/171 (56%), Gaps = 14/171 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+Y+ M+A A+G+ + MG YGIG R+++A++E Sbjct: 440 ARGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSRLLSAILEQFARIYVE 499 Query: 332 ---SHDGK---GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + K I +P +APF I L+ + D+ + ++ +L G V DD Sbjct: 500 KTPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+ G +FA +DL+G P++V +G K ++ VE+K R TG +++ +E++N Sbjct: 560 ERAGVKFADSDLIGLPVRVTIGKK-AAEGIVEVKIRATGEVVEINKDELVN 609 >gi|315038578|ref|YP_004032146.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|312276711|gb|ADQ59351.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] Length = 565 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 106/226 (46%), Positives = 142/226 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L AII +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEAIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDRINVPEMIMPHLLPATLWQESGRYKKYGPEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + +N + Sbjct: 121 NLKSYKQMPMALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFNDQENA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R G+ P+ A+SG +GG S EF A GE + +++ Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEN 226 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 2/161 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++A +E +G+ WP Sbjct: 406 IEVGHIFKLGTYYTKTMGADFLDQNGKAQPVIMGSYGIGVTRMLSAAVEQHLTERGVAWP 465 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF+I ++ +K + + EK+ + S+ DV +DD E+ G +FA ADL+G P Sbjct: 466 KEIAPFEIHIVQMKMNKDDQTELAEKLEKKFSE-KYDVLYDDRKERAGVKFADADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +++ +G K +D VE+K +MS++E+ + + Sbjct: 525 IRITIGKK-AADGIVEVKRPTDAKATEMSIDELDKFVNQEL 564 >gi|325957052|ref|YP_004292464.1| prolyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|325333617|gb|ADZ07525.1| prolyl-tRNA synthetase [Lactobacillus acidophilus 30SC] Length = 565 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 106/226 (46%), Positives = 142/226 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L AII +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEAIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDRINVPEMIMPHLLPATLWQESGRYKKYGPEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + +N + Sbjct: 121 NLKSYKQMPMALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFNDQENA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R G+ P+ A+SG +GG S EF A GE + +++ Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEN 226 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 2/161 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++A +E +G+ WP Sbjct: 406 IEVGHIFKLGTYYTKTMGADFLDQNGKAQPVIMGSYGIGVTRMLSAAVEQHLTERGVAWP 465 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF+I ++ +K + + EK+ + S+ DV +DD E+ G +FA ADL+G P Sbjct: 466 KEIAPFEIHIVQMKMNKDDQTELAEKLEKKFSE-KYDVLYDDRKERAGVKFADADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +++ +G K +D VE+K +MS++E+ + + Sbjct: 525 IRITIGKK-AADGIVEVKRPTDAKATEMSIDELDKFVNQEL 564 >gi|271963639|ref|YP_003337835.1| proline--tRNA ligase [Streptosporangium roseum DSM 43021] gi|270506814|gb|ACZ85092.1| Proline--tRNA ligase [Streptosporangium roseum DSM 43021] Length = 580 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 106/226 (46%), Positives = 144/226 (63%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+++P DAE+ SHKL++R G + + + GIYSWLPLG+ L+NV I+REE Sbjct: 3 LRMSSLFLRTLRDDPADAEVPSHKLLVRAGYVRRVAPGIYSWLPLGKMVLENVTRIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G E+ P L + + +GR+ YG + RL DR + GPTHEE+ TD+ + Sbjct: 63 MNRMGGQEVLFPALLPREYYEATGRWTEYGDTLFRLQDRKGADYLLGPTHEEMFTDMVKG 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFDL +G K SY + + Sbjct: 123 EYSSYKDYPVTLYQIQTKYRDEARPRAGILRGREFVMKDSYSFDLDDDGLKRSYEQHRET 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 Y+R F RLG+ A SG +GG S EF+ A TGE T V C + Sbjct: 183 YIRTFDRLGISYKICFATSGAMGGSASEEFLAPAATGEDTFVACHQ 228 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ G DGK V MGSYG+G R VA + E HD G++ Sbjct: 418 RGIEIGHIFQLGRKYADAAKLDALGPDGKPIRVTMGSYGVGVSRAVAVLAEQRHDELGLV 477 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP VAP + ++ Q+ +A ++ L G V DD G G +F A+LL Sbjct: 478 WPREVAPVDVHVVGTGKDGQI--EAANRLAEDLQARGLRVLVDDRAGVSPGVKFKDAELL 535 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P +I+G + ++ E++ R+TG++E++ ++E + Sbjct: 536 GMPTILIIG-RGLAQGVAELRDRVTGVKEEIPIDEAAD 572 >gi|327183775|gb|AEA32222.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118] Length = 565 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 106/226 (46%), Positives = 142/226 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L AII +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEAIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDRINVPEMIMPHLLPATLWQESGRYKKYGPEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + +N + Sbjct: 121 NLKSYKQMPMALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFNDQENA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R G+ P+ A+SG +GG S EF A GE + +++ Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEN 226 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 2/161 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++A +E +G+ WP Sbjct: 406 IEVGHIFKLGTYYTKTMGADFLDQNGKAQPVIMGSYGIGVTRMLSAAVEQHLTERGVAWP 465 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF+I ++ +K + + EK+ + S+ DV +DD E+ G +FA ADL+G P Sbjct: 466 KEIAPFEIHIVQMKMNKDDQTELAEKLEKKFSE-KYDVLYDDRKERAGVKFADADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +++ +G K +D VE+K +MS++E+ + + Sbjct: 525 IRITIGKK-AADGIVEVKRPTDAKATEMSIDELDKFVNQEL 564 >gi|78185232|ref|YP_377667.1| prolyl-tRNA synthetase [Synechococcus sp. CC9902] gi|114152270|sp|Q3AWR9|SYP_SYNS9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78169526|gb|ABB26623.1| Prolyl-tRNA synthetase [Synechococcus sp. CC9902] Length = 593 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 108/229 (47%), Positives = 145/229 (63%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +AEIASH+L+LR G I + GIY +LPL K + + AI+R+E Sbjct: 1 MRVSRLLLVTLRDVPAEAEIASHQLLLRGGYIRRIGSGIYGYLPLMWKVIQRITAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P L A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 LNTAGAQETLLPQLHPAELWQRSGRWQGYTAGEGIMFHLEDRQGRELGLGPTHEEVVTSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SY+ LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSF +++Y +M Sbjct: 121 AGELLQSYKQLPVNLYQVQTKFRDEIRPRFGLMRGREFIMKDAYSFHANEADLQNTYLEM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y RIF R GL ++P+ A+SG IGG S EF+V AD GE + S D Sbjct: 181 DQAYRRIFERCGLAAVPVDADSGAIGGAASQEFMVTADAGEDLILLSDD 229 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 88/165 (53%), Gaps = 8/165 (4%) Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 A + VHN PE + RGIEVGHIF G KYS M + F GK + MG Sbjct: 414 AGEACVHN-------PEAHLIEKRGIEVGHIFQLGRKYSEAMDSRFTNEAGKTEHFWMGC 466 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+ A +E HD GI WP ++AP++ ++ DQ + E +Y +L G Sbjct: 467 YGIGISRLAQAAVEQHHDDAGICWPAAIAPYEAIVVVANMQDQTQAELGESLYKQLLAAG 526 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +DD E+ G +F ADL+G P +V+VG + SD VE+ R Sbjct: 527 VDALFDDRKERAGVKFKDADLIGIPWRVVVG-RDASDGVVELVER 570 >gi|238852615|ref|ZP_04643025.1| proline--tRNA ligase [Lactobacillus gasseri 202-4] gi|238834761|gb|EEQ26988.1| proline--tRNA ligase [Lactobacillus gasseri 202-4] Length = 565 Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 106/225 (47%), Positives = 140/225 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MNNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 YL+IF R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YLKIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 82/222 (36%), Positives = 110/222 (49%), Gaps = 16/222 (7%) Query: 200 GPIGGDLSHEFIVLADT--GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 GPIG D + + IV +T G V + D+ + N D D ++ + TA Sbjct: 334 GPIGADWADK-IVADETVKGLYNVVVGANETDYQYQNANLDRD--FKVDEFADIRTANEG 390 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 V D LP S IEVGHIF GT Y+ M A F +GK V MGSY Sbjct: 391 ELDPV------DHLPLKFTTS---IEVGHIFKLGTYYTKTMGADFLDNNGKAKPVIMGSY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A IE GI WP +APF + LI +K D+ + EK+ LS Sbjct: 442 GIGVTRMLSAAIEQHLTENGIAWPKEIAPFDVHLIQMKMKDEDQTELAEKLEKELS-TKY 500 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 DV +DD E+ G +F ADL+G PL++ +G K D VE+K Sbjct: 501 DVLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVK 541 >gi|227510249|ref|ZP_03940298.1| prolyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189901|gb|EEI69968.1| prolyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 569 Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 143/224 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P+ AE SHK+++R G I Q S G+Y++LPL + L + I+R+E Sbjct: 1 MKQSKILVPTLKETPKGAEALSHKMLVRAGYIKQISAGMYAYLPLAYRVLTKIETIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +T A EM +P + A+LW ESGRY++YG E+ + +R+D I GPTHEE T++ R Sbjct: 61 MEKTSAHEMLMPDVLPAELWKESGRYETYGPELFKFKNRHDTDFILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPR+G++RSREF+MKDAYSF +Y M + Sbjct: 121 SIKSYKQLPLVLYQIQNKYRDEDRPRYGLLRSREFIMKDAYSFAANEADLDDAYRAMEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R+GLK + + G +GG S EF +A GE + S Sbjct: 181 YRTIFDRIGLKYRVIIGDGGAMGGSDSKEFSAMAAVGEDTIVYS 224 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/156 (39%), Positives = 95/156 (60%), Gaps = 1/156 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GT+YS ++A +G+ V MGSYGIG R+++A+ E + D G+ Sbjct: 403 TRGIEIGHIFKLGTRYSKSLNANVLDENGRSIPVIMGSYGIGISRLLSAISEQNADENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAP+ + +I I +V + +I +L++ G +V DD E+ G +FA +DLL Sbjct: 463 VWPVAVAPYTVHVIPINVKKEVQMNLANQIEEQLTENGIEVLVDDRKERPGVKFADSDLL 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ VG K + VEIK R G + +EE+ Sbjct: 523 GIPLRITVGKK-ADEGIVEIKIRKNGETVESKVEEL 557 >gi|86606966|ref|YP_475729.1| prolyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] gi|114152267|sp|Q2JSB6|SYP_SYNJA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|86555508|gb|ABD00466.1| prolyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] Length = 609 Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 110/230 (47%), Positives = 147/230 (63%), Gaps = 5/230 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+E+P +AE+ SHKL+LR G I + S GIY++LPL + L ++ I+REE Sbjct: 6 RLSQMLFVTLREDPAEAELISHKLLLRGGFIRRLSPGIYTYLPLLWRVLQKISDIVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDIF 118 N GA E +P LQ A++W ESGR+D Y + M L DR + GPTHEEV+T + Sbjct: 66 NAIGAQECLLPQLQPAEIWRESGRWDVYTQAEGIMFALKDRQGREQALGPTHEEVITLLA 125 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 R I+SYR LP YQIQ KFRDE+RPRFG++R REFLMKDAYSF E + +Y M+ Sbjct: 126 RDLIRSYRQLPQILYQIQTKFRDEIRPRFGLLRGREFLMKDAYSFHANEESLRQTYQDMY 185 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGD--LSHEFIVLADTGETQVFCSKD 226 +Y RI R GL+ + A++G IGG S EF+VLA GE ++ + D Sbjct: 186 RAYGRILRRCGLEFCVVEADAGAIGGPSAASQEFMVLASAGEDEILYTPD 235 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 102/192 (53%), Gaps = 4/192 (2%) Query: 255 PYAATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P A DV + D P+ +ARGIE+GHIF G K+SLPM A+F G + Sbjct: 412 PLAEVVDVRKAQAGDRCLLNPDQILETARGIEIGHIFQLGLKFSLPMRASFTDEQGSEQP 471 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + MG YGIG R+ A +E SHD GIIWP ++AP+ + ++ D EK+ Sbjct: 472 LWMGCYGIGVSRLAQAAVEQSHDANGIIWPVAIAPYHVVVVVPNVSDPEQTKVAEKLVQE 531 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G + WDD E+ G +F ADL+G P ++ G + + KVE+ R TG ++ + Sbjct: 532 LAAAGIETLWDDRDERAGVKFKDADLIGIPYRLTTG-RSLKQGKVELAERATGQAVEIPI 590 Query: 432 EEVINYASHRFS 443 EEV+ R + Sbjct: 591 EEVVATLKERIA 602 >gi|227549046|ref|ZP_03979095.1| prolyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] gi|227078900|gb|EEI16863.1| prolyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] Length = 604 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 144/223 (64%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G + + + G+YSWLPLG + L + ++REE Sbjct: 15 RLSELFLRTLREDPADAEVPSHKLLVRAGYVRRAAPGVYSWLPLGLRTLRKIETVVREEM 74 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA+E+ P L + + ++ R+ YG ++ RL DR M+ GPTHEE+ T +S Sbjct: 75 DAMGALELLFPALLPREPYEQTNRWTEYGDDLFRLKDRKGADMLLGPTHEEMFTVAVKSM 134 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T EG + SY K +Y Sbjct: 135 FSSYKDFPVTLYQIQTKYRDEARPRAGILRGREFVMKDSYSFDMTDEGLEQSYQKHRSAY 194 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 RIF R+G++ A SG +GG S EF+ +D+GE S Sbjct: 195 QRIFDRVGIRYEICEATSGAMGGSASEEFLAYSDSGEDTFVIS 237 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 81/144 (56%), Gaps = 3/144 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ M GK MGSYGIG R++A V E HD KG+ Sbjct: 440 ARGIELGHIFQLGRKYTEAMDVQILDEGGKRAVPTMGSYGIGVSRMMAVVAEQRHDEKGL 499 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 +WP ++AP+++ ++ + D A E I L G +V +DD + G +F A+L Sbjct: 500 VWPVAIAPYQVHVV-VANKDAAALQAGEDIAGELDAAGLEVLFDDRPKTSPGVKFKDAEL 558 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 LG P VI+G F ++ VE++ R Sbjct: 559 LGMPFIVILGRSF-AEGIVELRIR 581 >gi|258593203|emb|CBE69542.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [NC10 bacterium 'Dutch sediment'] Length = 572 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 150/226 (66%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++ +P L+E P +AE SHKLM+R G++ Q + GIY LPLGQ+ +D ++AIIREE Sbjct: 1 MRWTRSLIPTLKEEPAEAEAISHKLMVRAGLVRQLAAGIYITLPLGQRVMDKISAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR E+++P L A+LW ++GR+ + G+EM RL DR + M G THEEV+ + Sbjct: 61 MNRIDGQEITMPVLHPAELWQQTGRWATIGEEMFRLYDRGKRQMCLGMTHEEVVAWLAAR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR+LP T+YQIQ K RDE RP+ GV+R+REF+MKD+YS D G + SY + Sbjct: 121 EIRSYRDLPQTWYQIQTKLRDEARPKSGVLRTREFVMKDSYSLDRDDAGLEKSYELHKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSK 225 Y RIF R GL + ++ G +GG ++HEF+ ++ GE ++ C + Sbjct: 181 YCRIFTRCGLSFHAVESDPGMMGGAVAHEFMAPSEAGEDEIALCDR 226 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 66/179 (36%), Positives = 106/179 (59%), Gaps = 2/179 (1%) Query: 260 SDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+H D P E R IE+G+IF GTKYS+PM A + G+++ + MGSY Sbjct: 374 ADIHQVSNGDRCPHCEGSLRIERVIEIGNIFRLGTKYSIPMKAVYLSEAGEEYPIVMGSY 433 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+ AA +E HD GIIWP ++APF++ L+ + DQ + E +Y++L + G Sbjct: 434 GIGLARIAAAAVEQHHDDLGIIWPSAIAPFQLHLLPVNMRDQKMAELAEALYSQLQQAGI 493 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + +DD E+ G +F ADLLG P+++ +G++ + + V++K R T + L E ++ Sbjct: 494 ETLYDDRDERAGVKFKDADLLGLPMRMTIGTRTLKEGMVDLKIRKTAKEVQIPLSEAVS 552 >gi|116514305|ref|YP_813211.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274963|sp|Q049U9|SYP_LACDB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116093620|gb|ABJ58773.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126002|gb|ADY85332.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 565 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 104/221 (47%), Positives = 138/221 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA SH++MLR G I Q + G+YS+LPLG K L II EE Sbjct: 1 MRQSIFFMPTLKETPADAVAKSHQVMLRGGYIRQVTAGVYSYLPLGYKVLRKTEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +EM +P + A +W ESGR YG EM RL DR+ + M+ GPTHEE TD+ Sbjct: 61 MANAGVVEMIMPHMLPASMWEESGRLPKYGPEMFRLKDRHGREMLLGPTHEETFTDVVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF + E ++ + Sbjct: 121 SLKSYKQMPLQLYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAASQEQLDKQFDDEKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 YL+IF R G++ P+ A+SG +GG S EF A GE + Sbjct: 181 YLKIFKRTGVEVRPVIADSGTMGGKNSIEFQAPAAVGEDTI 221 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/139 (41%), Positives = 83/139 (59%), Gaps = 3/139 (2%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++AV+E G+ WP Sbjct: 407 IEVGHIFKLGTYYTETMGAKFLDQNGKSQPVIMGSYGIGVTRLLSAVVEQHATENGVAWP 466 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF I +I +K D++ E + A+ +K DV +DD E+ G +F ADL+G P Sbjct: 467 KEIAPFGIHIIQMKMKDEIQSKLAEDLEAKFAK--YDVLYDDRNERPGVKFNDADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIKH 420 +++ VG + +D VE+K Sbjct: 525 IRITVG-RDAADGIVEVKR 542 >gi|227524393|ref|ZP_03954442.1| prolyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] gi|227088624|gb|EEI23936.1| prolyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] Length = 569 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 143/224 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P+ AE SHK+++R G I Q S G+Y++LPL + L + I+R+E Sbjct: 1 MKQSKILVPTLKETPKGAEALSHKMLVRAGYIKQISAGMYAYLPLAYRVLTKIETIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +T A EM +P + A+LW ESGRY++YG E+ + +R+D I GPTHEE T++ R Sbjct: 61 MEKTSAHEMLMPDVLPAELWKESGRYETYGPELFKFKNRHDTDFILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPR+G++RSREF+MKDAYSF +Y M + Sbjct: 121 SIKSYKQLPLILYQIQNKYRDEDRPRYGLLRSREFIMKDAYSFAANEADLDDAYRAMEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R+GLK + + G +GG S EF +A GE + S Sbjct: 181 YRTIFDRIGLKYRVIIGDGGAMGGSDSKEFSAMAAVGEDTIVYS 224 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/156 (39%), Positives = 95/156 (60%), Gaps = 1/156 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GT+YS ++A +G+ V MGSYGIG R+++A+ E + D G+ Sbjct: 403 TRGIEIGHIFKLGTRYSKSLNANVLDENGRSIPVIMGSYGIGISRLLSAISEQNADENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAP+ + +I I +V + +I +L++ G +V DD E+ G +FA +DLL Sbjct: 463 VWPVAVAPYTVHVIPINVKKEVQMNLANQIEEQLTENGIEVLVDDRRERPGVKFADSDLL 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ VG K + VEIK R G + +EE+ Sbjct: 523 GIPLRITVGKK-ADEGIVEIKIRKNGETVESKVEEL 557 >gi|104774217|ref|YP_619197.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|122983932|sp|Q1G9P3|SYP_LACDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|103423298|emb|CAI98139.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 565 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 104/221 (47%), Positives = 138/221 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA SH++MLR G I Q + G+YS+LPLG K L II EE Sbjct: 1 MRQSIFFMPTLKETPADAVAKSHQVMLRGGYIRQVTAGVYSYLPLGYKVLRKTEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +EM +P + A +W ESGR YG EM RL DR+ + M+ GPTHEE TD+ Sbjct: 61 MANAGVVEMIMPHMLPASMWEESGRLPKYGPEMFRLKDRHGREMLLGPTHEETFTDVVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF + E ++ + Sbjct: 121 SLKSYKQMPLQLYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAASQEQLDKQFDDEKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 YL+IF R G++ P+ A+SG +GG S EF A GE + Sbjct: 181 YLKIFKRTGVEVRPVIADSGTMGGKNSIEFQAPAAVGEDTI 221 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/139 (41%), Positives = 83/139 (59%), Gaps = 3/139 (2%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++AV+E G+ WP Sbjct: 407 IEVGHIFKLGTYYTETMGAKFLDQNGKSQPVIMGSYGIGVTRLLSAVVEQHATENGVAWP 466 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF I +I +K D++ E + A+ +K DV +DD E+ G +F ADL+G P Sbjct: 467 KEIAPFGIHIIQMKMKDEIQSKLAEDLEAKFAK--YDVLYDDRNERPGVKFNDADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIKH 420 +++ VG + +D VE+K Sbjct: 525 IRITVG-RDAADGIVEVKR 542 >gi|239631344|ref|ZP_04674375.1| prolyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525809|gb|EEQ64810.1| prolyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 570 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 100/218 (45%), Positives = 141/218 (64%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 F+P +E P AE SHK+MLR+G + Q G+Y++LPL ++ L + AII +E + A Sbjct: 2 FIPTEKEVPSSAEAKSHKMMLRSGFVRQIQAGVYAYLPLAERVLARIEAIIDDEMTKIDA 61 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 ++M +P L A+LW ESGRY++YG + +L +R D+ MI GPTHEE TD+ R+ +KSY+ Sbjct: 62 VKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQDRKMILGPTHEETFTDLVRNELKSYK 121 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 +P YQIQ KFRDE RPR+GV+R REF+M+DAYSF + Y +M +Y IF Sbjct: 122 RMPLVLYQIQDKFRDEDRPRYGVLRGREFIMQDAYSFTSNDQDLDTIYRQMEHAYTNIFD 181 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 RLGL+ + + G +GG S EF +AD GE + S Sbjct: 182 RLGLRYRSIIGDGGAMGGKDSKEFSAIADIGEDTIVYS 219 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GT+Y+ M A F +G+ + MGSYGIG R+++A+ E D G+ Sbjct: 398 TRGIEIGHIFKLGTRYTETMGANFLDENGRSQPIIMGSYGIGVSRLLSAIAEQQADEHGL 457 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP ++APF I LI + + + I L G V DD E+ G +FA +DL+ Sbjct: 458 VWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEDAGYSVLVDDRNERPGVKFADSDLI 517 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G PL+V VG K V D VE+K R TG ++ EE+I+ Sbjct: 518 GVPLRVTVGKKAV-DEIVELKLRKTGETIEVKKEELIS 554 >gi|290890493|ref|ZP_06553568.1| hypothetical protein AWRIB429_0958 [Oenococcus oeni AWRIB429] gi|290479889|gb|EFD88538.1| hypothetical protein AWRIB429_0958 [Oenococcus oeni AWRIB429] Length = 570 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 109/248 (43%), Positives = 155/248 (62%), Gaps = 12/248 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +E P +A++ SH MLR G I Q + GIY++LPL + ++ + +IIREE Sbjct: 1 MKQSKIFIPTEKEVPAEAQVKSHIFMLRAGFIRQVAGGIYAYLPLANRIINKIESIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A EM +P + A+LW ESGR+ +YG +M +L DR+D+ I PTHEE T I Sbjct: 61 MSRIDANEMLMPEMIPAELWKESGRFYTYGPQMYQLKDRHDREFIMAPTHEETFTKIISD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDELRP+ G++R REF+MKDAYSF +G +Y+ + + Sbjct: 121 EIKSYKKLPLILYQIQQKFRDELRPKNGLLRGREFIMKDAYSFSSDQKGLDDAYDLIESA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE------------TQVFCSKDFM 228 Y RIF R+GL + A+SG +GG S EF +A TGE + +++F Sbjct: 181 YKRIFDRVGLDYREIIADSGSMGGKDSAEFQAIAATGEDIIAYSNSGKYAANIEMAEEFF 240 Query: 229 DFPIPSEN 236 + IP E+ Sbjct: 241 EKKIPDED 248 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 96/169 (56%), Gaps = 1/169 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K V +GIE+GHIF GT Y+ M + GK + MG YGIG R+++A+ E S+D Sbjct: 400 KLVFTKGIEIGHIFKLGTFYTSKMGGQIQNEKGKLSDIIMGCYGIGISRLLSAIAEQSND 459 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG IWP +VAPF + LI + ++ + ++I L + G +V DD E+ G +FA Sbjct: 460 PKGFIWPKAVAPFNVHLITMNTKNESQVNLAKQIDKNLQEAGFEVLVDDRKERPGVKFAD 519 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +DL+G P++V+VG + VE+K R D+S + +I + + + Sbjct: 520 SDLIGIPIRVVVGRQ-ADQQIVEVKARGQESTNDVSTDNLIAFLKDKLN 567 >gi|159901383|ref|YP_001547630.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|159894422|gb|ABX07502.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 570 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 104/224 (46%), Positives = 143/224 (63%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK +E P DAE+ SH L++R G + Q S GIYS LPL ++ ++ IIREE Sbjct: 1 MRMSKLATSTTKEAPNDAELISHSLLVRAGYVKQQSAGIYSLLPLCVRSTQKISQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ +P + SADLW E+GRY+ +E+LR DRN+K M+ THEEV+TDI R Sbjct: 61 MDAIDGQELLMPVVTSADLWRETGRYEGVTEELLRFKDRNNKDMVLNMTHEEVVTDIMRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSYR +P YQIQ K+RDE RPR G++R REF MKDAYSF T E Y ++ + Sbjct: 121 YIKSYRQMPVMVYQIQTKYRDEARPRGGIIRLREFTMKDAYSFHATIEDLDQYYEQVLNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y RI+ R GL ++++ G +GG ++HEF+ + GE T + C Sbjct: 181 YKRIYQRCGLPVEVVQSDPGMMGGKIAHEFMAVTPAGEDTLILC 224 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 94/160 (58%), Gaps = 1/160 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 AR IEVG+IF GTKYS M F G+ MG YGIG R++A++IE +D +G+ Sbjct: 398 ARAIEVGNIFKLGTKYSAAMKCVFANEKGEMQPAIMGCYGIGVQRILASLIEKFNDARGM 457 Query: 339 IWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 + P +VAP+++ ++ + +++Y+ L G V DD G++F ADL Sbjct: 458 MLPITVAPYQVHVVGTDYQSNAETKSVADQLYSDLQAQGVTVLLDDRDVNAGNKFGDADL 517 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +G P+QVI+GS+ + + + E+K R TG ++L +++++ Sbjct: 518 IGNPIQVIIGSRGLKNGQAEVKIRSTGETTMVALADLLSH 557 >gi|326776245|ref|ZP_08235510.1| prolyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] gi|326656578|gb|EGE41424.1| prolyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] Length = 567 Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 105/238 (44%), Positives = 146/238 (61%), Gaps = 1/238 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + +++ GI+SWLPLG+K LDN++ ++REE Sbjct: 6 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRNAAGIWSWLPLGKKVLDNISNVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + Sbjct: 66 DAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKDRKGGDYLLGPTHEEIFTQTVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG HSY +Y Sbjct: 126 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTTDEGLAHSYALHRAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++IF RLGL + A SG +GG S EF+ A GE F D+ +E F Sbjct: 186 IKIFERLGLDHRIVSAVSGAMGGSASEEFLAPAAAGE-DTFADCPHCDYAANTEAVTF 242 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 8/159 (5%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 406 RAIEIGHIFQLGRKYADTFQLDVLGQQGKPVRVTMGSYGIGVSRAVAALTEQTADDKGLC 465 Query: 340 WPDSVAPFKISLINI-KA-HDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 WP +AP + ++ KA ++ D EK L+ G V DD G G +F ++ Sbjct: 466 WPREIAPADVHVVAAGKALQTELALDVSEK----LNAAGLRVLVDDRPGVSPGVKFTDSE 521 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G P +++V + +D +E+K R TG RE+++++E I Sbjct: 522 LIGVP-KILVAGRRSADGVLELKDRRTGEREELTVDEAI 559 >gi|227513178|ref|ZP_03943227.1| prolyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] gi|227083559|gb|EEI18871.1| prolyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] Length = 569 Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 143/224 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P+ AE SHK+++R G I Q S G+Y++LPL + L + I+R+E Sbjct: 1 MKQSKILVPTLKETPKGAEALSHKMLVRAGYIKQISAGMYAYLPLAYRVLTKIETIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +T A EM +P + A+LW ESGRY++YG E+ + +R+D I GPTHEE T++ R Sbjct: 61 MEKTSAHEMLMPDVLPAELWKESGRYETYGPELFKFKNRHDTDFILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPR+G++RSREF+MKDAYSF +Y M + Sbjct: 121 SIKSYKQLPLVLYQIQNKYRDEDRPRYGLLRSREFIMKDAYSFAANEADLDDAYCAMEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF R+GLK + + G +GG S EF +A GE + S Sbjct: 181 YRTIFDRIGLKYRVIIGDGGAMGGSDSKEFSAMAAVGEDTIVYS 224 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/156 (39%), Positives = 95/156 (60%), Gaps = 1/156 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GT+YS ++A +G+ V MGSYGIG R+++A+ E + D G+ Sbjct: 403 TRGIEIGHIFKLGTRYSKSLNANVLDENGRSIPVIMGSYGIGISRLLSAISEQNADENGL 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAP+ + +I I +V + +I +L++ G +V DD E+ G +FA +DLL Sbjct: 463 VWPVAVAPYTVHVIPINVKKEVQMNLANQIEEQLTENGIEVLVDDRRERPGVKFADSDLL 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ VG K + VEIK R G + +EE+ Sbjct: 523 GIPLRITVGKK-ADEGIVEIKIRKNGETVESKVEEL 557 >gi|118474251|ref|YP_891864.1| prolyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] gi|152016592|sp|A0RNT1|SYP_CAMFF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118413477|gb|ABK81897.1| prolyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] Length = 567 Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 144/224 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ +K ++P +E P+DA + SH+ ++R G + Q G+Y++LPLG++ L V I+R+E Sbjct: 1 MKFTKLYVPTTKEAPKDATLPSHQFLIRAGFVAQIGSGLYNFLPLGKRVLRKVENIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + +LW +S RY +GKE+LRL DR D + PTHEE + D+ R Sbjct: 61 MDKAGANEVALSFVVPGELWKQSRRYFKFGKELLRLKDRKDNDFLLAPTHEESIVDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI LKFRDE RPRFG++R REF+MKD YSF + K ++ M + Sbjct: 121 KVTSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFIMKDGYSFHASEADLKREFDLMETT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y +IF RLGL + A+SG IGG S EF+VLA GE + S Sbjct: 181 YTKIFSRLGLNFRAVEADSGAIGGSGSKEFMVLAKNGEDDILIS 224 Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 5/145 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVGHIF G +YS M ATF +GK MG YGIG R+VA ++E+SHD KG Sbjct: 405 TKGIEVGHIFQLGVRYSETMGATFLDENGKSKPFFMGCYGIGVSRLVAVMVEASHDEKGC 464 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IW APF + +I NIK +Q+ + + L G +V DD E+ G + A + Sbjct: 465 IWKKECAPFMVHIIVSNIKDTEQM--QFALNLESNLESSGVEVLLDDRNERFGVKMADFE 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L+G P V+VG K + +++VE R Sbjct: 523 LIGVPFGVVVG-KGLQNAEVEFIKR 546 >gi|325685949|gb|EGD28012.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 565 Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 104/221 (47%), Positives = 138/221 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA SH++MLR G I Q + G+YS+LPLG K L II EE Sbjct: 1 MRQSIFFMPTLKETPADAVAKSHQVMLRGGYIRQVTAGVYSYLPLGYKVLRKTEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +EM +P + A +W ESGR YG EM RL DR+ + M+ GPTHEE TD+ Sbjct: 61 MANAGVVEMIMPHMLPASMWEESGRLPKYGPEMFRLKDRHGREMLLGPTHEETFTDVVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF + E ++ + Sbjct: 121 SLKSYKQMPLHLYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAASQEQLDKQFDNEKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 YL+IF R G++ P+ A+SG +GG S EF A GE + Sbjct: 181 YLKIFKRTGVEVRPVIADSGTMGGKNSIEFQAPAAVGEDTI 221 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/139 (41%), Positives = 83/139 (59%), Gaps = 3/139 (2%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++AV+E G+ WP Sbjct: 407 IEVGHIFKLGTYYTETMGAKFLDQNGKSQPVIMGSYGIGVTRLLSAVVEQYATENGVAWP 466 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF I +I +K D++ E + A+ +K DV +DD E+ G +F ADL+G P Sbjct: 467 KEIAPFGIHIIQMKMKDEIQSKLAEDLEAKFAK--YDVLYDDRNERPGVKFNDADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIKH 420 +++ VG + +D VE+K Sbjct: 525 IRITVG-RDAADGIVEVKR 542 >gi|227890230|ref|ZP_04008035.1| prolyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] gi|227849232|gb|EEJ59318.1| prolyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] Length = 565 Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 105/226 (46%), Positives = 142/226 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 YL+IF+R G+ P+ A+SG +GG S EF A GE + +++ Sbjct: 181 YLKIFNRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEN 226 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 80/138 (57%), Gaps = 2/138 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++A +E GI WP Sbjct: 406 IEVGHIFKLGTYYTDTMGADFLDNNGKAKPVIMGSYGIGVTRMLSAAVEQHLTENGIAWP 465 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF I LI +K D+ + EK+ LS DV +DD E+ G +F ADL+G P Sbjct: 466 KEIAPFAIHLIQMKMKDETQTELAEKLEKELS-AKYDVLYDDRNERPGVKFNDADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIK 419 L++ +G K D VE+K Sbjct: 525 LRITIGRK-AKDGIVEVK 541 >gi|319760426|ref|YP_004124364.1| prolyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] gi|318039140|gb|ADV33690.1| prolyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] Length = 595 Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 95/210 (45%), Positives = 144/210 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P++ E SH+LMLR+GMI Q S G+Y+WLP+G + L V I+R+E Sbjct: 1 MRATQYLLTTLKEIPKNCETISHQLMLRSGMIRQISTGLYTWLPIGLRVLRKVENIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N IE+S+P +Q A+LW +SGR+ YG E+LR +R ++ + GPTHEE+++++ Sbjct: 61 MNNISFIEISMPIIQPANLWKQSGRWSEYGPELLRFKNRVNQEFVLGPTHEEMISNLICK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ P YQ+ K+RDE+RPRFG++R++EF MKD YSF + +++YN ++ Sbjct: 121 EIISYKQFPIKLYQMNTKYRDEIRPRFGLIRAKEFTMKDGYSFHTNNKCLQNTYNNIYHQ 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 Y IF+R+GL ++A++G GG LSHEF Sbjct: 181 YHTIFNRIGLNFHVVQADTGNTGGTLSHEF 210 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 97/161 (60%), Gaps = 6/161 (3%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IE+GHIF G KYS + + + + + + MG YGIG R++ +IE ++D GIIWP Sbjct: 430 IEIGHIFQLGDKYSRSIYSCIQKYNKFNIKIIMGCYGIGITRIIPTIIEQNYDQYGIIWP 489 Query: 342 DSVAPFKISLINIKAHDQV-CRDACEKIYARL-SKVGCDVFWDDMGEQIGSQFAVADLLG 399 DS+APFK+++I I H V R+ E++Y + S +G DVF D E G FA DL+G Sbjct: 490 DSIAPFKLAIIPINMHVSVNVRNTTEELYTQFKSIIGSDVFIYDRKENPGIMFADIDLIG 549 Query: 400 FPLQVIVGSKFVSDSKVEIKHR----LTGIREDMSLEEVIN 436 P +++ + +++ +VE KHR T I+ D+ L+ +IN Sbjct: 550 IPHILVISDRNLNNQEVEYKHRKTRTTTKIKLDVILQFLIN 590 >gi|24656200|ref|NP_647737.1| Prolyl-tRNA synthetase [Drosophila melanogaster] gi|7292265|gb|AAF47674.1| Prolyl-tRNA synthetase [Drosophila melanogaster] Length = 458 Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 137/423 (32%), Positives = 210/423 (49%), Gaps = 43/423 (10%) Query: 2 RRSKYFLPILQENPRDAEIA-------SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G++ S G Y +P+ Q+++D Sbjct: 3 KASRIFCPALI-TPKNAVVKQTEQLSRSQKLLTELGLVKSGSNGTYQIMPMAQRSVDKCI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ + G ++++P L LW ++GR D E + DR+ K + PTHEE + Sbjct: 62 DLVQSNMQQAGGQKITLPILTPTGLWKKTGRLDGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP +QI KFRDEL+ RFG+MR++EFLMKD YSFD++ E + + Sbjct: 122 TAMLATTSPISYRQLPLRLFQIGPKFRDELKTRFGLMRAKEFLMKDMYSFDVSEETAMET 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPI 232 Y + +Y R+F +L + + + A +G +GG +SHE+ ++ GE + CS F Sbjct: 182 YTLVNAAYDRLFKQLEVPFVKVNAATGIMGGSVSHEYHYVSPVGEDNLLQCSS--CGFAG 239 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 SE + + P +SD+ RG+EV H F G Sbjct: 240 NSE-----------VVKAPASCPSCNSSDLKE--------------VRGVEVAHTFLLGD 274 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS P+ ATF GK + MG YGIG RV+AA +E + WP +AP+ + LI Sbjct: 275 KYSKPLGATFLNTTGKPQSLVMGCYGIGITRVIAAALEVLSSDHELRWPKLLAPYDVCLI 334 Query: 353 NIKAHDQVCRDACEKIYARLSKVG--C---DVFWDDMGE-QIGSQFAVADLLGFPLQVIV 406 K + +A L VG C ++ DD E IG + A LG PL ++V Sbjct: 335 GPKQGSKEQPEAEVIENELLLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTIVV 394 Query: 407 GSK 409 G+K Sbjct: 395 GAK 397 >gi|256851262|ref|ZP_05556651.1| prolyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260660686|ref|ZP_05861601.1| prolyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|282934730|ref|ZP_06339973.1| proline--tRNA ligase [Lactobacillus jensenii 208-1] gi|297206129|ref|ZP_06923524.1| proline--tRNA ligase [Lactobacillus jensenii JV-V16] gi|256616324|gb|EEU21512.1| prolyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260548408|gb|EEX24383.1| prolyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|281301305|gb|EFA93606.1| proline--tRNA ligase [Lactobacillus jensenii 208-1] gi|297149255|gb|EFH29553.1| proline--tRNA ligase [Lactobacillus jensenii JV-V16] Length = 565 Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 106/225 (47%), Positives = 140/225 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA ASHK+M+R G I Q + G+YS+LPLG + L II EE Sbjct: 1 MRQSNFFMPTLKEAPADAVAASHKIMIRGGYIRQVTAGVYSYLPLGYRVLRKAERIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDRINVPEMIMPHLLPATLWQESGRYYKYGDEMFKLKDRHGRDSLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATKEQLDKQFDDQKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/153 (41%), Positives = 91/153 (59%), Gaps = 2/153 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++A +E + G+ WP Sbjct: 406 IEVGHIFKLGTYYTETMGADFLDQNGKAQPVIMGSYGIGVTRMLSAAVEQNLTEHGVAWP 465 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF + LI +K D+V E +YA+ S DV +DD E+ G +FA ADL+G P Sbjct: 466 KEIAPFALHLIQMKMKDEVQTKLAESLYAKFSD-KYDVLYDDRNERAGVKFADADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L++ +G K +D VE+K L +++L E+ Sbjct: 525 LRITIGKK-AADGIVEVKRPLDEKASEVTLAEL 556 >gi|301168478|emb|CBW28068.1| proline tRNA synthetase [Bacteriovorax marinus SJ] Length = 573 Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 104/228 (45%), Positives = 151/228 (66%), Gaps = 3/228 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S F +E P DAEI SH+LM+R G+IH+ G+YS+LP G +++ V IIREE Sbjct: 1 MKLSTGFWQTYKEVPADAEIPSHQLMVRAGLIHKMGSGLYSYLPFGYRSIRKVEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ + + +LW ESGR+D+ G +ML++ D+ + + PT+EE +TDIFR Sbjct: 61 LDKAGCHEILMSMVTPGELWQESGRWDAMGDQMLKVKDKGGRDLCLSPTNEEAVTDIFRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+NLP T YQI KFRDELRPRFG+MR REF MKD YSF + + Y+++F + Sbjct: 121 TIKSYKNLPVTLYQINTKFRDELRPRFGLMRGREFTMKDGYSFHIDKDSLDEVYDRIFKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIG--GDLSHEFIVLADTGETQV-FCSK 225 Y IF R GL+ + A++G + +HEF V+A+TGE +V +C++ Sbjct: 181 YEAIFTRAGLEFSAVEADAGAMADSDQKTHEFQVIANTGEDEVIYCNE 228 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 91/158 (57%), Gaps = 2/158 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KY+ M T ++GK MG YGIG RVVAA +E HD KGI+ Sbjct: 409 RGIEVGHIFQLGDKYTKAMGTTVLDSNGKAMNPLMGCYGIGVTRVVAAAVEQHHDDKGIV 468 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++AP+ + I + ++ EKIY + + +V +DD G +F ADLLG Sbjct: 469 WPMALAPYHVYFAEITKSAE-NKELAEKIYNEILEANIEVVFDDRKAGPGFKFKDADLLG 527 Query: 400 FPLQVIVGSK-FVSDSKVEIKHRLTGIREDMSLEEVIN 436 PLQ++ G + F D +EI+ R TG + E+V++ Sbjct: 528 LPLQLVFGERDFKKDGMLEIRIRKTGESLKVKPEDVVS 565 >gi|222823773|ref|YP_002575347.1| prolyl-tRNA synthetase [Campylobacter lari RM2100] gi|254782892|sp|B9KGB1|SYP_CAMLR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|222538995|gb|ACM64096.1| prolyl-tRNA synthetase [Campylobacter lari RM2100] Length = 565 Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 143/222 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK++ +ENP+DA + SH +++ I Q G+Y++LPLG++ LD + II+EE Sbjct: 1 MKFSKFYAISTKENPKDATLPSHIFLVKGAFIEQIGSGLYNFLPLGKRVLDKIKNIIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E+++ A+LW ESGR++ +GKE+LR DR + + GPTHEE M + R+ Sbjct: 61 MDKAGALEVNLSFNTPAELWKESGRFNVFGKELLRFKDRKENDFVLGPTHEEAMVALIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF + +N M + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHASEADLDKEFNLMHET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 Y +I RLGL + A+SG IGG S EF+VLA GE + Sbjct: 181 YSKILTRLGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 222 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 97/165 (58%), Gaps = 3/165 (1%) Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 ++K ++GIEVGHIF G KYS M+A++ +GK + MG YG+G R+VA IE+S Sbjct: 399 QHKLKQSKGIEVGHIFKLGKKYSQAMNASYLDENGKAQFFTMGCYGMGVSRLVAVAIEAS 458 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 HD KG IW ++APF + +I D + E+IY ++ +DD E+ G + Sbjct: 459 HDEKGCIWNKTLAPFVLDIIVSNIKDIKAMEFAEQIYTHFKDK--EILFDDRNERFGVKI 516 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L+GFP +++G +D +VE+ HR T ++ + +EVI++ Sbjct: 517 NDFELMGFPYALVIGKSLEND-EVELIHRNTLEKQVLKTQEVISH 560 >gi|300812560|ref|ZP_07092977.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496433|gb|EFK31538.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 565 Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 104/221 (47%), Positives = 138/221 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA SH++MLR G I Q + G+YS+LPLG K L II EE Sbjct: 1 MRQSIFFMPTLKETPADAVAKSHQVMLRGGYIRQVTAGVYSYLPLGYKVLRKTEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +EM +P + A +W ESGR YG EM RL DR+ + M+ GPTHEE TD+ Sbjct: 61 MANAGVVEMIMPHMLPASMWEESGRLPKYGPEMFRLKDRHGREMLLGPTHEETFTDVVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF + E ++ + Sbjct: 121 SLKSYKQMPLHLYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAASQEQLDKQFDDEKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 YL+IF R G++ P+ A+SG +GG S EF A GE + Sbjct: 181 YLKIFKRTGVEVRPVIADSGTMGGKNSIEFQAPAAVGEDTI 221 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 57/139 (41%), Positives = 82/139 (58%), Gaps = 3/139 (2%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++AV+E G+ WP Sbjct: 407 IEVGHIFKLGTYYTETMGAKFLDQNGKSQPVIMGSYGIGVTRLLSAVVEQHATENGVAWP 466 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 + PF I +I +K D++ E + A+ +K DV +DD E+ G +F ADL+G P Sbjct: 467 KEITPFGIHIIQMKMKDEIQSKLAEDLEAKFAK--YDVLYDDRNERPGVKFNDADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIKH 420 +++ VG + +D VE+K Sbjct: 525 IRITVG-RDAADGIVEVKR 542 >gi|227892604|ref|ZP_04010409.1| prolyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] gi|227865589|gb|EEJ73010.1| prolyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] Length = 565 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 105/221 (47%), Positives = 139/221 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L AII +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEAIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDRINVPEMIMPHLLPATLWQESGRYKKYGPEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFDDQKNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R G+ P+ A+SG +GG S EF A GE + Sbjct: 181 YKRIFKRAGVSVHPVIADSGTMGGKNSTEFQAPAAVGEDTI 221 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 90/161 (55%), Gaps = 2/161 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++A +E G+ WP Sbjct: 406 IEVGHIFKLGTYYTKTMGADFLDQNGKAKPVIMGSYGIGVTRMLSAAVEQHLTEHGVAWP 465 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF I ++ +K + + EK+ + S DV +DD E+ G +FA ADL+G P Sbjct: 466 KEIAPFSIHIVQMKMNKDDQTELAEKLEKKFSD-KYDVLYDDRKERAGVKFADADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +++ VG K +D VE+K +MS++E+ + + Sbjct: 525 IRITVGKK-AADGIVEVKRPTDEKATEMSIDELDKFVNQEL 564 >gi|227432324|ref|ZP_03914317.1| prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351930|gb|EEJ42163.1| prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 572 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 103/230 (44%), Positives = 148/230 (64%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L++ P +AE+ SH+L+L+ G I + G++S+LPL ++ L+ + IIREE Sbjct: 1 MKQSKLLMPTLRDIPAEAEVKSHQLLLKAGYIRPIAAGMFSYLPLAKRVLNKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ A EM VP + A+LW SGRY++YG + + +R D+ I GPTHEE T + Sbjct: 61 MDKIDANEMLVPEVLPAELWQRSGRYETYGPALYKFKNRQDRDFILGPTHEETFTQLIAD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R+REF+MKDAYSF EG +++ M + Sbjct: 121 EIKSYKKLPLTVYQIQAKFRDENRPRFGLLRTREFIMKDAYSFSADQEGLDEAFHNMEEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y IF RLGL+ + ++G +GG S EF A GE + S D D+ Sbjct: 181 YTNIFDRLGLEYRAIVGDAGAMGGSDSKEFSAPAAAGEDTIAYS-DATDY 229 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 87/149 (58%), Gaps = 1/149 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIE+GHIF GT+YS + A +G+ V MGSYGIG R+++A+ E D G++W Sbjct: 407 GIEIGHIFKLGTRYSKTLGAQVLDNNGRQTDVIMGSYGIGVSRLLSAIAEQKADEDGLVW 466 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P SVAPF+I ++ I D+ E++ L G +V DD E+ G +FA ADL+G Sbjct: 467 PASVAPFEIHIVPINMKDEDQARVAEQLETLLVAQGMEVLVDDRKERAGVKFADADLIGL 526 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 P+++ VG K D VE+K R + +M Sbjct: 527 PIRITVGKKADEDV-VEVKVRASNTNIEM 554 >gi|42519365|ref|NP_965295.1| prolyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|81832202|sp|Q74IS2|SYP_LACJO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|41583653|gb|AAS09261.1| prolyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] Length = 565 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 105/225 (46%), Positives = 141/225 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 YL+IF+R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YLKIFNRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 79/138 (57%), Gaps = 2/138 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++A +E GI WP Sbjct: 406 IEVGHIFKLGTYYTDTMGADFLDNNGKAKPVIMGSYGIGVTRMLSAAVEQHLTENGIAWP 465 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF I LI +K D+ EK+ LS DV +DD E+ G +F ADL+G P Sbjct: 466 KEIAPFAIHLIQMKMKDETQTKLAEKLEKELS-AKYDVLYDDRNERPGVKFNDADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIK 419 L++ +G K D VE+K Sbjct: 525 LRITIGRK-AKDGIVEVK 541 >gi|254447045|ref|ZP_05060512.1| prolyl-tRNA synthetase [gamma proteobacterium HTCC5015] gi|198263184|gb|EDY87462.1| prolyl-tRNA synthetase [gamma proteobacterium HTCC5015] Length = 522 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 100/175 (57%), Positives = 131/175 (74%), Gaps = 1/175 (0%) Query: 50 LDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPT 109 L V AI+REE N G +E+ +PT+Q +LW ESGR + YG E+LRL+DR+++ YGPT Sbjct: 2 LKKVEAIVREEMNSAGGVELLMPTIQPTELWQESGRLEQYGPELLRLSDRHERPFCYGPT 61 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEG 169 HEEV+TD+ R IKSY+ LP FYQIQLKFRDE+RPRFGVMR+REF+MKDAYSF L + Sbjct: 62 HEEVITDLARREIKSYKQLPVNFYQIQLKFRDEIRPRFGVMRAREFVMKDAYSFHLDADS 121 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FC 223 +++Y M+ +Y IF RLGL+ + A++G IGG+ SHEF VLAD+GE + FC Sbjct: 122 LQNTYEAMYRAYSNIFTRLGLRFRAVHADTGSIGGNASHEFHVLADSGEDAIAFC 176 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 66/156 (42%), Positives = 98/156 (62%), Gaps = 1/156 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS M AT +GKD + MG YGIG RV+AA IE +HD KGI+ Sbjct: 359 RGIEVGHIFQLGTKYSESMGATVLDENGKDSVMTMGCYGIGVTRVIAAAIEQNHDNKGIV 418 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APFK++++ + + + RD E++Y + G DV DD + G +FA +L+ Sbjct: 419 WPDNIAPFKLAIVPLNQNKSERVRDYAEELYRQCQSKGIDVVLDDRDARPGVKFADIELV 478 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P +++VG + + + +E K R D+ L+++ Sbjct: 479 GIPHRIVVGDRGLDNGALEYKGRGDADSRDIPLDQL 514 >gi|182435611|ref|YP_001823330.1| prolyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|226701340|sp|B1VYP2|SYP_STRGG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|178464127|dbj|BAG18647.1| putative prolyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 567 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 105/238 (44%), Positives = 146/238 (61%), Gaps = 1/238 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + +++ GI+SWLPLG+K LDN++ ++REE Sbjct: 6 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRNAAGIWSWLPLGKKVLDNISNVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + Sbjct: 66 DAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKDRKGGDYLLGPTHEEIFTQTVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG HSY +Y Sbjct: 126 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTTDEGLAHSYALHRAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++IF RLGL + A SG +GG S EF+ A GE F D+ +E F Sbjct: 186 IKIFERLGLDHRIVSAVSGAMGGSASEEFLAPAAAGE-DTFADCPNCDYAANTEAVTF 242 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 8/159 (5%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 406 RAIEIGHIFQLGRKYADTFQLDVLGQQGKPVRVTMGSYGIGVSRAVAALTEQTADDKGLC 465 Query: 340 WPDSVAPFKISLINI-KA-HDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 WP +AP + ++ KA ++ D EK L+ G V DD G G +F ++ Sbjct: 466 WPREIAPADVHVVAAGKALQTELALDVSEK----LNAAGLRVLVDDRPGVSPGVKFTDSE 521 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G P +++V + +D +E+K R TG RE+++++E I Sbjct: 522 LIGVP-KILVAGRRSADGVLELKDRRTGEREELTVDEAI 559 >gi|329667116|gb|AEB93064.1| prolyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026] Length = 565 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 105/225 (46%), Positives = 141/225 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 YL+IF+R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YLKIFNRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 80/138 (57%), Gaps = 2/138 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++A +E GI WP Sbjct: 406 IEVGHIFKLGTYYTDTMGADFLDNNGKAKPVIMGSYGIGVTRMLSAAVEQHLTENGIAWP 465 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF I LI +K D+ + EK+ LS DV +DD E+ G +F ADL+G P Sbjct: 466 KEIAPFAIHLIQMKMKDETQTELAEKLEKELS-AKYDVLYDDRNERPGVKFNDADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIK 419 L++ +G K D VE+K Sbjct: 525 LRITIGRK-AKDGIVEVK 541 >gi|311744140|ref|ZP_07717946.1| proline--tRNA ligase [Aeromicrobium marinum DSM 15272] gi|311313270|gb|EFQ83181.1| proline--tRNA ligase [Aeromicrobium marinum DSM 15272] Length = 593 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 101/218 (46%), Positives = 143/218 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FL L+++P DAE+ SH+L++R G + + + GIYSWLPLG K L V AI+REE Sbjct: 1 MRMSRLFLRTLRDDPADAEVPSHRLLVRAGYVRRVAPGIYSWLPLGLKVLARVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ P L + + S R+ YG + RL DR ++ GPTHEE+ T + + Sbjct: 61 MEAIGAQEVRFPALLPREPYEASNRWTEYGPNLFRLTDRKGADLLLGPTHEELFTLLVKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G + SY + Sbjct: 121 LYGSYKDLPLSIYQIQTKYRDEARPRAGILRGREFIMKDSYSFDVDDAGLEASYQAHRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y+RIF RLG + + + A+SG +GG S EF+ ++DTGE Sbjct: 181 YVRIFDRLGFEYVVVHADSGAMGGSASEEFLAVSDTGE 218 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 71/172 (41%), Positives = 99/172 (57%), Gaps = 4/172 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAAV+ESSHD GI Sbjct: 420 ARGIEMGHIFQLGRKYAEVLDLKVLDENGKLVTVTMGSYGVGVSRAVAAVVESSHDDLGI 479 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI--GSQFAVAD 396 +WP ++AP+ + LI D+ ++Y L G DV +DD +I G +F A+ Sbjct: 480 VWPRALAPYDVHLIA-AGKDEAVHLGAARLYDELRAAGLDVLFDDRPGKISLGVKFKDAE 538 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 LLG P V+VG F +D VE+K R TG R D+ +++++ S RP+ Sbjct: 539 LLGMPTIVVVGKGF-ADGVVEVKDRATGDRSDVPVDDLVELLSASVREGRPL 589 >gi|268319258|ref|YP_003292914.1| hypothetical protein FI9785_773 [Lactobacillus johnsonii FI9785] gi|262397633|emb|CAX66647.1| proS [Lactobacillus johnsonii FI9785] Length = 565 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 105/225 (46%), Positives = 141/225 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 YL+IF+R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YLKIFNRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 80/138 (57%), Gaps = 2/138 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++A +E GI WP Sbjct: 406 IEVGHIFKLGTYYTDTMGADFLDNNGKAKPVIMGSYGIGVTRMLSAAVEQHLTENGIAWP 465 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF I LI +K D+ + EK+ LS DV +DD E+ G +F ADL+G P Sbjct: 466 KEIAPFAIHLIQMKMKDETQTELAEKLEKELS-AKYDVLYDDRNERPGVKFNDADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIK 419 L++ +G K D VE+K Sbjct: 525 LRITIGRK-AKDGIVEVK 541 >gi|116617800|ref|YP_818171.1| prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122271999|sp|Q03YC4|SYP_LEUMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116096647|gb|ABJ61798.1| Prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 572 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 103/230 (44%), Positives = 148/230 (64%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L++ P +AE+ SH+L+L+ G I + G++S+LPL ++ L+ + IIREE Sbjct: 1 MKQSKLLMPTLRDIPAEAEVKSHQLLLKAGYIRPIAAGMFSYLPLAKRVLNKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ A EM VP + A+LW SGRY++YG + + +R D+ I GPTHEE T + Sbjct: 61 MDKIDANEMLVPEVLPAELWQRSGRYETYGPALYKFKNRQDRDFILGPTHEETFTQLIAD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R+REF+MKDAYSF EG +++ M + Sbjct: 121 EIKSYKKLPLTVYQIQAKFRDENRPRFGLLRTREFIMKDAYSFSADQEGLDEAFHNMEEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y IF RLGL+ + ++G +GG S EF A GE + S D D+ Sbjct: 181 YTNIFDRLGLEYRAIVGDAGAMGGSDSKEFSAPAAAGEDTIAYS-DATDY 229 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIE+GHIF GT+YS + A +G+ V MGSYGIG R+++A+ E D G++W Sbjct: 407 GIEIGHIFKLGTRYSKTLGAQVLDNNGRQTDVIMGSYGIGVSRLLSAIAEQKADEDGLVW 466 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P SVAPF I ++ I D+ E++ L G +V DD E+ G +FA ADL+G Sbjct: 467 PASVAPFDIHIVPINMKDEDQARVAEQLETLLVAQGMEVLVDDRKERAGVKFADADLIGL 526 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 P+++ VG K D VE+K R + +M Sbjct: 527 PIRITVGKKADEDV-VEVKVRASNTNIEM 554 >gi|27820035|gb|AAO25049.1| GM03563p [Drosophila melanogaster] Length = 458 Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 137/423 (32%), Positives = 209/423 (49%), Gaps = 43/423 (10%) Query: 2 RRSKYFLPILQENPRDAEIA-------SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G + S G Y +P+ Q+++D Sbjct: 3 KASRIFCPALI-TPKNAVVKQTEQLSRSQKLLTELGFVKSGSNGTYQIMPMAQRSVDKCI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ + G ++++P L LW ++GR D E + DR+ K + PTHEE + Sbjct: 62 DLVQSNMQQAGGQKITLPILTPTGLWKKTGRLDGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP +QI KFRDEL+ RFG+MR++EFLMKD YSFD++ E + + Sbjct: 122 TAMLATTSPISYRQLPLRLFQIGPKFRDELKTRFGLMRAKEFLMKDMYSFDVSEETAMET 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPI 232 Y + +Y R+F +L + + + A +G +GG +SHE+ ++ GE + CS F Sbjct: 182 YTVVNAAYDRLFKQLEVPFVKVNAATGIMGGSVSHEYHYVSPVGEDNLLQCSS--CGFAG 239 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 SE + + P +SD+ RG+EV H F G Sbjct: 240 NSE-----------VVKAPASCPSCNSSDLKE--------------VRGVEVAHTFLLGD 274 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS P+ ATF GK + MG YGIG RV+AA +E + WP +AP+ + LI Sbjct: 275 KYSKPLGATFLNTSGKPQSLVMGCYGIGITRVIAAALEVLSSDHELRWPKLLAPYDVCLI 334 Query: 353 NIKAHDQVCRDACEKIYARLSKVG--C---DVFWDDMGE-QIGSQFAVADLLGFPLQVIV 406 K + +A L VG C ++ DD E IG + A LG PL ++V Sbjct: 335 GPKQGSKEQPEAEVIENELLLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTIVV 394 Query: 407 GSK 409 G+K Sbjct: 395 GAK 397 >gi|260905197|ref|ZP_05913519.1| prolyl-tRNA synthetase [Brevibacterium linens BL2] Length = 615 Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 101/218 (46%), Positives = 143/218 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S F+ +E+P AE+ASHKL+ R G I + + GIY+WLPLG + L + AI+REE Sbjct: 3 LRMSSLFVRTQKEDPVGAEVASHKLLHRAGYIRRSAPGIYTWLPLGLQVLGKIEAIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G+ E+ P L AD + +SGR++++G ++ L DR D I PTHEEV T + + Sbjct: 63 MARAGSQEVHFPGLLPADPYRKSGRWEAFGPDLFHLKDRKDNDYILAPTHEEVFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQ+Q K+RDE RPR G++R REF+MKDAYSFD+ G SY M V+ Sbjct: 123 LYSSYKDLPLSIYQVQTKYRDEARPRAGLLRGREFIMKDAYSFDIDDAGLDASYEAMRVA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 YLR F RLG+ +P++A G +GG + EFI ++ GE Sbjct: 183 YLRAFARLGVPCLPVKATPGAMGGSGTEEFIYPSEVGE 220 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 3/158 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARG+E+G IF G KY+ + +GK V MGSYG+G RV+A + E H G+ Sbjct: 432 ARGVEIGQIFKLGRKYAEALDLKVLDQNGKATTVTMGSYGLGVTRVMACIAEEYHSEGGL 491 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADL 397 +WP +AP + +I +++ +A EK+ A L G V DD + G +FA A+L Sbjct: 492 LWPQHLAPADVHIIAAGKGEEIA-EAAEKLTAELESEGVSVLLDDRLKVSPGFKFADAEL 550 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G P ++VG + ++D VE+++RL ++++ + EV+ Sbjct: 551 IGIPTVIVVG-RGLADGVVEVRNRLADEKQEVPVAEVV 587 >gi|116748707|ref|YP_845394.1| prolyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] gi|152112959|sp|A0LHQ7|SYP_SYNFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116697771|gb|ABK16959.1| prolyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] Length = 581 Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 106/226 (46%), Positives = 147/226 (65%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYF+ L E P++AE SH L+LR IH + G+YS LPLG + + + AI+REE Sbjct: 1 MRYSKYFIHTLFEVPKEAETPSHILLLRGCYIHPVAAGVYSLLPLGHRVAEKIKAILREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +E+++P L A+LW +S RY G+E+ R+ DR D+ + THEEV+TDI R Sbjct: 61 LNAIEGLEVTMPVLNPAELWKKSSRYYDIGQELFRIKDRKDREFVLAMTHEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR+LP YQIQ K RDE RPR G++R REF M DAYSF Y ++F + Sbjct: 121 FLRSYRHLPVMLYQIQTKIRDEARPRAGLLRVREFFMNDAYSFHPDFADLDAYYPRIFNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 YLRIF R GL ++P+ A+SG +GG SHEF++ + GE + V C++ Sbjct: 181 YLRIFTRCGLTTVPIEADSGIMGGTGSHEFMLESPNGEDRFVVCTQ 226 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 60/148 (40%), Positives = 87/148 (58%), Gaps = 4/148 (2%) Query: 280 RGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 RGIE+GH F GTKY+ M AT+ A G V MG YGIG R++A+ +E HD G Sbjct: 404 RGIELGHTFKLGTKYTAAESMDATYLDAAGNQQRVVMGCYGIGVERLMASAVEQWHDEGG 463 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 + +P S+APF++ L ++ ++ +A + +Y RL D +DD E G + ADL Sbjct: 464 MSFPYSIAPFQVILCSLGRKPEIL-EAAQALYERLG-AHYDTIYDDRDESPGVKLKDADL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 LG P++V+V K + +VEIK R TG+ Sbjct: 522 LGVPIRVVVSQKLLQKGEVEIKVRRTGV 549 >gi|154148423|ref|YP_001406459.1| prolyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] gi|166980113|sp|A7I1R8|SYP_CAMHC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|153804432|gb|ABS51439.1| prolyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] Length = 569 Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 98/222 (44%), Positives = 143/222 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK+F P L+E P+DA + SH ++R G I Q G+Y++LPLG+ ++ + A+I++E Sbjct: 1 MKFSKFFAPTLKEAPKDAILPSHVFLIRAGFIEQLGSGLYNFLPLGEMVIEKIKAVIKDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++TGA++++ + ++ W ESGRY+ YGKE+LR+ DR + + PT+EE + + Sbjct: 61 MDKTGALQVNFSFVTPSEFWQESGRYNVYGKELLRIKDRKENGFVLSPTNEESSVKMIAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPRFG++R REF+MKD YSF E K ++ M + Sbjct: 121 KITSYKQLPIHIYQINTKFRDEARPRFGLLRGREFIMKDGYSFHANMEDLKREFDVMEKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 Y IF RLGL + A+SG IGG S EF+VLA GE + Sbjct: 181 YTNIFSRLGLNFRAVEADSGAIGGSGSKEFMVLAQNGEDDIL 222 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 79/142 (55%), Gaps = 1/142 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A +IE+ HD KG I Sbjct: 407 KGIEVGHIFQLGQKYSKAMNAIFLDENGKAVPFFMGCYGIGVSRLLAVMIEAGHDEKGCI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W APFK+ +I + D+ + ++Y + G DD E+ G + +L+G Sbjct: 467 WNTQTAPFKLEIIISNSKDEDASNFAIQLYEKCKNAGISTLLDDRKERFGVKMNDFELIG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHR 421 FP V+VG K + D VE+ R Sbjct: 527 FPFAVLVG-KGLKDGNVELIER 547 >gi|238854745|ref|ZP_04645075.1| proline--tRNA ligase [Lactobacillus jensenii 269-3] gi|260663977|ref|ZP_05864830.1| prolyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|282932864|ref|ZP_06338261.1| proline--tRNA ligase [Lactobacillus jensenii 208-1] gi|313472268|ref|ZP_07812760.1| proline--tRNA ligase [Lactobacillus jensenii 1153] gi|238832535|gb|EEQ24842.1| proline--tRNA ligase [Lactobacillus jensenii 269-3] gi|239529664|gb|EEQ68665.1| proline--tRNA ligase [Lactobacillus jensenii 1153] gi|260561863|gb|EEX27832.1| prolyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|281302899|gb|EFA95104.1| proline--tRNA ligase [Lactobacillus jensenii 208-1] Length = 565 Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 106/225 (47%), Positives = 140/225 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA ASHK+M+R G I Q + G+YS+LPLG + L II EE Sbjct: 1 MRQSNFFMPTLKEAPADAVAASHKIMIRGGYIRQVTAGVYSYLPLGYRVLRKAERIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDRINVPEMIMPHLLPATLWQESGRYYKYGDEMFKLKDRHGRDSLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 83/138 (60%), Gaps = 2/138 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++A +E + G+ WP Sbjct: 406 IEVGHIFKLGTYYTETMGADFLDQNGKAQPVIMGSYGIGVTRMLSAAVEQNLTEHGVAWP 465 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF + LI +K +D+ E + + S+ DV +DD E+ G +FA ADL+G P Sbjct: 466 KEIAPFTLHLIQMKMNDEDQTKLAESLETKFSE-KYDVLYDDRKERAGVKFADADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIK 419 +++ +G K +D VE+K Sbjct: 525 IRITIGKK-AADGIVEVK 541 >gi|300173485|ref|YP_003772651.1| prolyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] gi|299887864|emb|CBL91832.1| Prolyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] Length = 571 Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 101/230 (43%), Positives = 146/230 (63%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+L+L+ G I + G++S+LP+ ++ L+ + IIREE Sbjct: 1 MKQSKLLMPTLREIPADAEVKSHQLLLKAGFIRPVAAGMFSYLPMAKRVLNKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N A EM VP + A+LW +SGRY++YG + + +R D+ I GPTHEE T + Sbjct: 61 MNAIDANEMLVPEILPAELWEKSGRYETYGPALYKFKNRQDRDFILGPTHEETFTQLMSD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG++R+REF+MKDAYSF G +++ M + Sbjct: 121 DIKSYKKLPLVVYQIQPKFRDENRPRFGLLRTREFIMKDAYSFSADQAGLDQAFHNMETA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y++IF R+GL + ++G +GG S EF A GE + D D+ Sbjct: 181 YIKIFDRIGLSYRAIVGDAGAMGGSDSKEFSAPAAAGE-DIIAYSDATDY 229 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 66/168 (39%), Positives = 100/168 (59%), Gaps = 5/168 (2%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIE+GHIF GT+YS + A +G+ + MGSYGIG R+++A++E D G+IW Sbjct: 407 GIEIGHIFKLGTRYSKVLGAQVLNENGRQTDMIMGSYGIGVSRLLSAIVEQKADADGLIW 466 Query: 341 PDSVAPFKISL--INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 P +VAPF + + +NIK DQV ++ L+ G +V DD E+ G +FA ADL+ Sbjct: 467 PANVAPFDVHIVPVNIKDADQVR--VAGQLETLLTTQGLEVLVDDRKERAGVKFADADLI 524 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 G P+++ VG K S+ VE+K R + +M L EV++ S S ++ Sbjct: 525 GLPIRITVGKK-ASEDIVEVKVRASNTNIEMRLSEVVDSVSVLLSGDK 571 >gi|281357583|ref|ZP_06244070.1| prolyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] gi|281315840|gb|EFA99866.1| prolyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] Length = 575 Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 103/218 (47%), Positives = 143/218 (65%), Gaps = 1/218 (0%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 ++E+P+DA+ SHK ++R G + S GIYS LPLG++ ++ + AIIREE NR E+ Sbjct: 9 IKEDPKDAKTVSHKFLVRGGYVRPVSAGIYSLLPLGKRIVEKIEAIIREEMNRIEGQEVL 68 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 +P + ADLW ESGRY+S G E+LR DRNDK MI THEE + + R+ + SY+ LP Sbjct: 69 MPVVLPADLWKESGRYESVGAELLRFRDRNDKPMILAMTHEEGIVHLVRTELNSYKQLPV 128 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 YQIQ K+RDE RPR G++R REF MKDAYSF + Y + +Y RIF R+G+ Sbjct: 129 MLYQIQTKYRDEARPRAGLIRVREFTMKDAYSFHTDQADLEKYYYRCHEAYERIFRRVGM 188 Query: 191 KSI-PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 K++ + A SG +GG +SHEF+ + D GE V + D+ Sbjct: 189 KNVLSIEANSGMMGGKVSHEFMAICDCGEDTVITNADY 226 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 73/154 (47%), Positives = 98/154 (63%), Gaps = 2/154 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RGIEVG+IF GTKY+ M + DGK H + MG YGIG R +AAVIE S D G Sbjct: 404 SRGIEVGNIFQLGTKYTESMHCDYLDRDGKSHPMIMGCYGIGVGRAMAAVIEQSCDEYGP 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP S+AP+++ L I +ACEK+YA L+ G +V +DD GE+ GS F+ ADL+ Sbjct: 464 IWPMSIAPYQVELCAINPDKAGVGEACEKLYADLTAAGIEVLYDDRGEKAGSMFSDADLI 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G PL+++V K ++D+ VE K R G R+ LE Sbjct: 524 GIPLRLVVSPKTLADNAVEFKVR--GSRDAEKLE 555 >gi|84394652|ref|ZP_00993343.1| prolyl-tRNA synthetase [Vibrio splendidus 12B01] gi|84374725|gb|EAP91681.1| prolyl-tRNA synthetase [Vibrio splendidus 12B01] Length = 551 Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 101/205 (49%), Positives = 138/205 (67%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 SH+LMLR GMI + + G+Y+WLP G + L V I+R+E + GA+E+ +P +Q +LW Sbjct: 2 SHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFELWE 61 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 E+GR + G E+LR DR+ + + PT EEV+T + R+ I SY+ LP YQIQ KFRD Sbjct: 62 ETGRSEKMGPELLRFTDRHSRPFVLSPTAEEVVTSLVRNEISSYKQLPLNLYQIQTKFRD 121 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 E RPRFGVMR+REF M DAYSFD+ EG + SY M +Y + F R+GL+ P+ A+SG Sbjct: 122 ERRPRFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLEYRPVLADSGA 181 Query: 202 IGGDLSHEFIVLADTGETQVFCSKD 226 IGG S EF VLA++GE + S + Sbjct: 182 IGGSGSQEFHVLAESGEDLIAFSSE 206 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 104/165 (63%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK ++MG YGIG RVVA+ IE +HD GI Sbjct: 387 RGIEVGHIFQLGNTYSKAMNCNVLGPDGKSVILEMGCYGIGVSRVVASAIEQNHDKFGIT 446 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF++++I + H + ++A EK+YA L+ +G +V +DD E+ G F +L+ Sbjct: 447 WPDALAPFQVAIIPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFKDIELV 506 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R TG +E ++++ VI + + + Sbjct: 507 GIPHTIVIGDRSMDEGNFEYKNRRTGDKEVIAMDTVIEHLKAQLA 551 >gi|33519754|ref|NP_878586.1| prolyl-tRNA synthetase [Candidatus Blochmannia floridanus] gi|81836111|sp|Q7VRC8|SYP_BLOFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33504099|emb|CAD83360.1| prolyl-tRNA synthetase [Candidatus Blochmannia floridanus] Length = 581 Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 105/266 (39%), Positives = 160/266 (60%), Gaps = 2/266 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L ++E P+ E SH+LMLR+GM+ Q S G+Y+WLP G + L + II EE Sbjct: 1 MRTTQYLLATIKEIPKSCEPISHQLMLRSGMVRQISSGVYTWLPTGLRVLKKIENIIHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G +E+ +P Q A+LW +SGR+ YG E+LR +R ++ + GPTHEE++TD+ + Sbjct: 61 MNKIGFLEIFMPITQPANLWKQSGRWSEYGLELLRFKNRTNQKFVLGPTHEEMITDLVCN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I S++ P YQI K+RDE RP+FGV+RS+EF+MKD YSF + + + +Y ++ Sbjct: 121 EILSHKQFPIKLYQINTKYRDEARPQFGVIRSKEFIMKDGYSFHIHQKSLEDTYYNIYQQ 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT--GETQVFCSKDFMDFPIPSENTD 238 Y IF R+GLK ++A+ G IGG +SHEF + ET +F D + + Sbjct: 181 YHIIFKRIGLKFCVVQADPGNIGGIVSHEFQAYYNNTQNETAIFTETFNKDMSNINTRKN 240 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHN 264 D +I+ I+ ++D HN Sbjct: 241 NDIVINNIHILNTIQTIKLTSADFHN 266 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 4/168 (2%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IE+GHIF G KYS +++ + + + + MG YGIG R+V VIE HD GIIWP Sbjct: 414 IEIGHIFQLGKKYSNCINSCIQKKNKDNLNITMGCYGIGITRIVPMVIEQHHDKHGIIWP 473 Query: 342 DSVAPFKISLINIKAHDQV-CRDACEKIYARLSK---VGCDVFWDDMGEQIGSQFAVADL 397 + +APFK+++I I + + ++ E++Y +LS +G D+ DD E G F DL Sbjct: 474 NEIAPFKLAIIPINMYRFINVQNTAEELYTQLSSIPVIGFDILLDDRKENPGIMFTDIDL 533 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 LG P +I+ + +++ +VE K+R TGI + + L +I + + + NN Sbjct: 534 LGIPHILIISERNLNNQEVEYKYRKTGIIQKIKLNLIIQFLTEKLMNN 581 >gi|313891975|ref|ZP_07825576.1| proline--tRNA ligase [Dialister microaerophilus UPII 345-E] gi|313119618|gb|EFR42809.1| proline--tRNA ligase [Dialister microaerophilus UPII 345-E] Length = 574 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 146/226 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P L+E P +A + SHK ML+ GMI + S G YS+LPL +++ + II EE Sbjct: 1 MKASKLYAPTLREIPSEAVVISHKYMLKAGMIRKISSGFYSYLPLAWRSIKKIENIIHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ + Q A++W ++GR+D YG+EM RL DR+++ PTHEE++T + Sbjct: 61 MAKIESQEILMSIAQPAEIWQQTGRWDVYGEEMFRLKDRHERDYCLAPTHEELVTTLVHM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY+ LP + YQIQ K+RDE RPRFG+MRSREF+MKDAY+FD+ EG Y+ M+ + Sbjct: 121 DTFSYKQLPVSLYQIQNKYRDEKRPRFGLMRSREFIMKDAYTFDVDEEGLDKQYHDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF + GL + A+SG IGG SHEF VLA+ GE + D Sbjct: 181 YTNIFTKCGLNFRTVIADSGAIGGSSSHEFEVLAEAGEADIVYEVD 226 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 90/145 (62%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVG +F GTKYS ++ T+ +GK + MG YGIG R +AA IE +HD GII Sbjct: 404 KGIEVGQVFKLGTKYSESLNCTYLDKNGKSKPMVMGCYGIGVTRTMAASIEQNHDKDGII 463 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W S+AP+++ +I + E++Y +SK ++ +DD E+ G +F ADL+G Sbjct: 464 WAVSIAPYEVVIIPANNKNSEVMKVAEELYRNMSKENNEIVFDDRNERAGIKFKDADLIG 523 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTG 424 +P++V +G K+ + KVEIK R TG Sbjct: 524 YPIRVTIGKKWEENGKVEIKIRRTG 548 >gi|239944683|ref|ZP_04696620.1| prolyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|239991146|ref|ZP_04711810.1| prolyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379] gi|291448145|ref|ZP_06587535.1| prolyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998] gi|291351092|gb|EFE77996.1| prolyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998] Length = 567 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 104/238 (43%), Positives = 146/238 (61%), Gaps = 1/238 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + +++ GI++WLPLG+K LDN++ ++REE Sbjct: 6 RMSRLMIKTLRDDPADAETLSHKLLVRAGYVRRNAAGIWTWLPLGKKVLDNISNVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + Sbjct: 66 DAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKDRKGGDYLLGPTHEEIFTQTVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG HSY +Y Sbjct: 126 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTTDEGLAHSYALHRAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++IF RLGL + A SG +GG S EF+ A GE F D+ +E F Sbjct: 186 IKIFERLGLDHRIVSAVSGAMGGSASEEFLAPAAAGE-DTFADCPNCDYAANTEAVTF 242 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 8/159 (5%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 406 RAIEIGHIFQLGRKYADTFQLDVLGQQGKPVRVTMGSYGIGVSRAVAALTEQTADDKGLC 465 Query: 340 WPDSVAPFKISLINI-KA-HDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVAD 396 WP +AP + ++ KA ++ D EK L+ G V DD G G +F ++ Sbjct: 466 WPREIAPADVHVVAAGKALQTELALDVSEK----LNAAGLRVLVDDRAGVSPGVKFTDSE 521 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G P +++V + +D +E+K R TG RE+++++E I Sbjct: 522 LIGVP-KILVAGRRSADGVLELKDRRTGEREELTVDEAI 559 >gi|332024431|gb|EGI64629.1| Putative prolyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior] Length = 437 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 128/397 (32%), Positives = 200/397 (50%), Gaps = 34/397 (8%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D SHKLM+ G+I S G+Y+ LPLG + L+ + I+ +E GA ++ +P L Sbjct: 30 DITSKSHKLMINYGIIKPLSIGMYALLPLGMRILNKLIDIVDKEMMNIGAQKILLPALTP 89 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR---SHIKSYRNLPFTFY 133 A LW ++ RYDS E+ L DR+ K I PTHEE + D+ + + LP Y Sbjct: 90 AALWKKTDRYDSNKTELFTLTDRHKKEYILSPTHEEAICDLISLAGPTVPISKLLPLKLY 149 Query: 134 QIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 QI K+RDE++PR G +RSREF+MKD Y+FD + + ++H+Y+ + SY IF ++G+K Sbjct: 150 QISSKWRDEMKPRLGFLRSREFIMKDLYTFDSSLDNARHTYDLVCESYNNIFRQIGIKYT 209 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 + G IGG +SHE+ ++D GE + PS + S+N + + T Sbjct: 210 KSIGDVGTIGGLMSHEYHYVSDIGEDTI--------LQCPSCH------FSINQSISKTT 255 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +++H S EVGH F TKYS P+ F K + Sbjct: 256 SCPECKNELH--------------SYTAAEVGHTFLLDTKYSRPLEVMFFMEQNKPTPMV 301 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA--HDQVCRDACEKIYAR 371 MG +G+G R++ V+E + WP +AP+ + +I KA ++ E+++ Sbjct: 302 MGCFGLGLSRIITLVVEILSINDEMRWPVKLAPYTVCIIPPKAGSKEESTSAYIEQLFEI 361 Query: 372 LSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVG 407 K D DD IG + A LLG+P +++G Sbjct: 362 FYKRNIDTILDDRTHYTIGKRLVFARLLGYPYIIVIG 398 >gi|313124034|ref|YP_004034293.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280597|gb|ADQ61316.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 565 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 103/221 (46%), Positives = 138/221 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA SH++MLR G I Q + G+YS+LPLG K L II EE Sbjct: 1 MRQSIFFMPTLKETPADAVAKSHQVMLRGGYIRQVTAGVYSYLPLGYKVLRKTEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +EM +P + + +W ESGR YG EM RL DR+ + M+ GPTHEE TD+ Sbjct: 61 MANAGVVEMIMPHMLPSSMWEESGRLPKYGPEMFRLKDRHGREMLLGPTHEETFTDVVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF + E ++ + Sbjct: 121 SLKSYKQMPLHLYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAASQEQLDKQFDNEKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 YL+IF R G++ P+ A+SG +GG S EF A GE + Sbjct: 181 YLKIFKRTGVEVRPVIADSGTMGGKNSIEFQAPAAVGEDTI 221 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/139 (41%), Positives = 83/139 (59%), Gaps = 3/139 (2%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++AV+E G+ WP Sbjct: 407 IEVGHIFKLGTYYTETMGAKFLDQNGKSQPVIMGSYGIGVTRLLSAVVEQHATENGVAWP 466 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF I +I +K D++ E + A+ +K DV +DD E+ G +F ADL+G P Sbjct: 467 KEIAPFGIHIIQMKMKDEIQSKLAEDLEAKFAK--YDVLYDDRNERPGVKFNDADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIKH 420 +++ VG + +D VE+K Sbjct: 525 IRITVG-RDAADGIVEVKR 542 >gi|153003352|ref|YP_001377677.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] gi|166980097|sp|A7H7J7|SYP_ANADF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152026925|gb|ABS24693.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] Length = 575 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 105/221 (47%), Positives = 140/221 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S+ F+P L+E P DA++ASHKL++R G I Q GIY +LPL ++ L + AI+REE Sbjct: 4 VRLSQAFVPTLKEAPADAQVASHKLLVRAGFIRQLGAGIYDYLPLAKRTLAKIEAIVREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E +P L A++W ESGR++ G M RL DR + G THEE+ T I R Sbjct: 64 MDAIGGQEFYLPALHPAEIWKESGRWEVMGDNMFRLKDRKNGDYCLGMTHEEIFTAIARD 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP +YQIQ KFRDE RP+ G++R R+F MKDAYSFD+ G SY + Sbjct: 124 ELRSYRQLPQVWYQIQTKFRDEPRPKSGLLRVRQFTMKDAYSFDVDRAGLDKSYEDQRRA 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R GL + ++A SG +GG S EF+V D GE V Sbjct: 184 YERIFTRCGLDFVAVQAHSGAMGGSESSEFMVRTDAGEDLV 224 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/196 (38%), Positives = 108/196 (55%), Gaps = 3/196 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 T P+A +++ + + P + +EVGHIF GTKYS M AT ADGK Sbjct: 381 TGPHATVAELRTVRAGEGCPRCDGTLDVFKALEVGHIFKLGTKYSESMKATVLDADGKAV 440 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MGSYGIG R++AA IE HD GI WP ++APF+ +++ + ++ + A E + A Sbjct: 441 PIVMGSYGIGVERIMAAAIELHHDELGIRWPPAIAPFQATVLTLGPEPELKKAADELVKA 500 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 LS G +V DD E+ G +F ADL+G PL++ VG K +++ KVE K R E + Sbjct: 501 -LSDAGLEVLHDDREERAGVKFKDADLVGIPLRISVGKKGLAEGKVEWKLRGDKAVELVP 559 Query: 431 LEEVINYASHRFSNNR 446 L EV A+ R Sbjct: 560 LAEVARRAAEHVRAGR 575 >gi|326692543|ref|ZP_08229548.1| prolyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773] Length = 571 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 102/230 (44%), Positives = 145/230 (63%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+L+L+ G I + G++++LPL Q+ L+ + AIIREE Sbjct: 1 MKQSKLLMPTLREVPADAEVKSHQLLLKAGFIRPVAAGMFAYLPLAQRVLNKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A EM VP + A+LW +SGRY++YG + + +R + I GPTHEE T + Sbjct: 61 MDRIDANEMLVPEILPAELWEKSGRYETYGPALYKFKNRQARDFILGPTHEETFTQLMAD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE RPRFG++R+REF+MKDAYSF G +Y+ M + Sbjct: 121 DIKSYKKLPLIVYQLQAKFRDENRPRFGLLRTREFIMKDAYSFSADQAGLDQAYHDMEAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y IF R+GL + ++G +GG S EF A GE + D D+ Sbjct: 181 YTNIFDRIGLSYRAIVGDAGAMGGSDSKEFSAPAAAGE-DIIAYSDASDY 229 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 1/153 (0%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V RGIE+GHIF GT+YS M A +G+ + MGSYGIG R+++A+ E D Sbjct: 403 VFTRGIEIGHIFKLGTRYSKTMGAQILDENGRQIDMIMGSYGIGVSRLLSAIAEQMADDD 462 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G++WP SVAPF + ++ + D+ ++ A L+ G DV DD E+ G +FA AD Sbjct: 463 GLVWPASVAPFDVHIVPVNLKDEDQARITSQLEAELTAQGLDVLVDDRKERAGVKFADAD 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L+G P+++ VG K D VE+K R + +M Sbjct: 523 LIGLPIRITVGKKAAEDV-VEVKVRASNTNIEM 554 >gi|33239959|ref|NP_874901.1| prolyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81835850|sp|Q7VD75|SYP_PROMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33237485|gb|AAP99553.1| Prolyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 603 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 105/229 (45%), Positives = 149/229 (65%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +AEI SH+L++R G I + + GIY+++PL K + + +I++EE Sbjct: 1 MRVSRLMLVTLRDVPAEAEIVSHQLLIRGGFIKRVTSGIYAYMPLMWKVIKKITSIVQEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + G +E +P L A+LW ESGR+D Y M L+DR + + GPTHEEV+T I Sbjct: 61 LDSKGCLETLLPQLHPAELWKESGRWDGYTAGEGIMFHLSDRQGRELGLGPTHEEVITKI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SY+ LP YQIQ KFRDE+RPRFG+MRSREF+MKDAYSF K +Y +M Sbjct: 121 ANEFLQSYKQLPVNLYQIQTKFRDEIRPRFGLMRSREFIMKDAYSFHADETNLKETYLEM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y +IF R GL+++ + A+SG IGG S EF+V A+ GE + S D Sbjct: 181 NDAYEKIFKRCGLETVAVDADSGAIGGAESREFMVTAEAGEDLILLSPD 229 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 97/173 (56%), Gaps = 1/173 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P+ K ++ RGIEVGHIF G KYS + A+F G + MG YGIG R+ A +E Sbjct: 422 PKQKLIAKRGIEVGHIFQLGRKYSSCLQASFTNEMGLEEPFWMGCYGIGISRLAQASVEQ 481 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++D GIIWP +APF++ +I D + R+ EK+Y++L G DV DD E+ G + Sbjct: 482 NYDQSGIIWPLGIAPFEVIVIVANMKDDLQRELGEKLYSQLKDEGVDVLIDDRKERAGVK 541 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 F ADL+G P ++I G + VE+ R TGI + + EE I SN Sbjct: 542 FKDADLIGIPWKIISGRDSAT-GIVELVERSTGISKSLKAEEAIKELLEEISN 593 >gi|195587264|ref|XP_002083385.1| GD13380 [Drosophila simulans] gi|194195394|gb|EDX08970.1| GD13380 [Drosophila simulans] Length = 458 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 136/425 (32%), Positives = 213/425 (50%), Gaps = 47/425 (11%) Query: 2 RRSKYFLPILQENPRDAEIA-------SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G++ S G Y +P+ Q+++D Sbjct: 3 KASRIFCPALI-TPKNAVVKQTEQLSRSQKLLTELGLVKSGSNGTYQIMPMAQRSVDKCI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ + G ++++P L LW ++GR + E + DR+ K + PTHEE + Sbjct: 62 DLVQSNMQQAGGQKITLPILTPTGLWKKTGRLEGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP +QI KFRDEL+ RFG+MR++EFLMKD Y+FD++ E ++ + Sbjct: 122 TAMLATTSPISYRQLPLRLFQIGPKFRDELKTRFGLMRAKEFLMKDMYTFDVSEESARET 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPI 232 Y+ + +Y R+F +L + + + A +G +GG +SHE+ ++ GE + CS F Sbjct: 182 YSVVNSAYDRLFKQLEVPFVKVNAATGMMGGSVSHEYHYVSPVGEDNLLQCSS--CGFAG 239 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 SE + P +SD+ RG+EV H F G Sbjct: 240 NSE-----------VVTAPARCPSCNSSDLKE--------------VRGVEVAHTFLLGD 274 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS P+ ATF GK + MG YGIG RV+AA +E + WP +AP+ + LI Sbjct: 275 KYSKPLGATFLNTSGKPQSLVMGCYGIGITRVIAAALEVLSSDHELRWPKLLAPYDVCLI 334 Query: 353 NIK--AHDQVCRDACEKIYARLSKVG--C---DVFWDDMGE-QIGSQFAVADLLGFPLQV 404 K + +Q + E L VG C ++ DD E IG + A LG PL + Sbjct: 335 GPKQGSKEQPQAEVIEN--ELLLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTI 392 Query: 405 IVGSK 409 +VG+K Sbjct: 393 VVGAK 397 >gi|58337540|ref|YP_194125.1| prolyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227904181|ref|ZP_04021986.1| prolyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] gi|81311450|sp|Q5FJN0|SYP_LACAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|58254857|gb|AAV43094.1| prolyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227868200|gb|EEJ75621.1| prolyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] Length = 565 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 104/225 (46%), Positives = 140/225 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L +II +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAESIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDNINVPEMMMPHLLPATLWQESGRYQKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDQQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 95/161 (59%), Gaps = 2/161 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++AV+E +G+ WP Sbjct: 406 IEVGHIFKLGTYYTKTMGADFLDQNGKAQPVIMGSYGIGVTRMLSAVVEQHLTDRGVAWP 465 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF+I ++ +K + + + EK+ + S+ DV +DD E+ G +FA ADL+G P Sbjct: 466 KEIAPFEIHIVQMKMNKEDQTELAEKLEKKFSE-KYDVLYDDRKERAGVKFADADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +++ +G K +D VE+K +MS++E+ + + Sbjct: 525 VRITIGKK-AADGIVEVKRPTDEKAVEMSIDELDKFVNQEL 564 >gi|296269038|ref|YP_003651670.1| prolyl-tRNA synthetase [Thermobispora bispora DSM 43833] gi|296091825|gb|ADG87777.1| prolyl-tRNA synthetase [Thermobispora bispora DSM 43833] Length = 580 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 144/224 (64%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DAE+ SHKL++R G I + + G+YSWLPLG+ L+N+ ++REE Sbjct: 3 LRMSTLFLRTLREDPADAELPSHKLLVRAGYIRRVAPGVYSWLPLGKIVLENIARVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ P L + + +GR+ YG + RL DR + GPTHEE+ TD+ + Sbjct: 63 MDRMGAQEVLFPALLPREYYEATGRWTEYGDTLFRLKDRKGADYLLGPTHEEMFTDMVKG 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++ P T YQIQ K+RDE RPR G++R+REF+MKD+YSFDL +G K SY + Sbjct: 123 ELSSYKDFPVTLYQIQTKYRDEARPRAGLLRAREFVMKDSYSFDLDDDGLKRSYEAHRET 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y+RIF RLGL A SG +GG S EF+ GE T V C Sbjct: 183 YIRIFDRLGLDYRICFAVSGAMGGSASEEFLAPCPNGEDTFVAC 226 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KYS G DGK + MGSYGIG R+VA + E HD G++ Sbjct: 418 RGIEIGHIFQLGRKYSDAAGLDALGPDGKPIRITMGSYGIGVSRLVAVIAEQRHDELGLV 477 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLL 398 WP VAP + ++ +Q+ + ++ L G V DD G G +F A+LL Sbjct: 478 WPREVAPADVHIVGTGKENQI--EVAVELAETLESRGLRVLVDDRPGVSPGVKFKDAELL 535 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P VIVG + +++ +E++ R +G RE++ L E + Sbjct: 536 GMPTIVIVG-RGLANGVLELRDRASGAREEIPLGEAAD 572 >gi|329120957|ref|ZP_08249588.1| proline--tRNA ligase [Dialister micraerophilus DSM 19965] gi|327471119|gb|EGF16573.1| proline--tRNA ligase [Dialister micraerophilus DSM 19965] Length = 574 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 146/226 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P L+E P +A + SHK ML+ GMI + S G YS+LPL +++ + II EE Sbjct: 1 MKASKLYAPTLREIPSEAVVISHKYMLKAGMIRKISSGFYSYLPLAWRSIKKIENIIHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ + Q A++W ++GR+D YG+EM RL DR+++ PTHEE++T + Sbjct: 61 MAKIESQEILMSIAQPAEIWQQTGRWDVYGEEMFRLKDRHERDYCLAPTHEELVTTLVHI 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY+ LP + YQIQ K+RDE RPRFG+MRSREF+MKDAY+FD+ EG Y+ M+ + Sbjct: 121 DTFSYKQLPVSLYQIQNKYRDEKRPRFGLMRSREFIMKDAYTFDVDEEGLDKQYHDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF + GL + A+SG IGG SHEF VLA+ GE + D Sbjct: 181 YTNIFTKCGLNFRTVIADSGAIGGSSSHEFEVLAEAGEADIVYEVD 226 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 90/145 (62%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVG +F GTKYS ++ T+ +GK + MG YGIG R +AA IE +HD GII Sbjct: 404 KGIEVGQVFKLGTKYSESLNCTYLDKNGKSKPMVMGCYGIGVTRTMAASIEQNHDKDGII 463 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W S+AP+++ +I + E++Y +SK ++ +DD E+ G +F ADL+G Sbjct: 464 WAVSIAPYEVVIIPANNKNSEIMKVAEELYRNMSKENNEIVFDDRNERAGIKFKDADLIG 523 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTG 424 +P++V +G K+ + KVEIK R TG Sbjct: 524 YPIRVTIGKKWEENGKVEIKIRRTG 548 >gi|195492914|ref|XP_002094195.1| GE21696 [Drosophila yakuba] gi|194180296|gb|EDW93907.1| GE21696 [Drosophila yakuba] Length = 458 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 145/456 (31%), Positives = 229/456 (50%), Gaps = 48/456 (10%) Query: 2 RRSKYFLPILQENPRDAEIA-------SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G++ S G Y +P+ Q+++D Sbjct: 3 KASRIFCPALI-TPKNAVVKQTEQLSRSQKLLTELGLVKSGSNGTYQIMPMAQRSVDKFI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ G ++++P L LW ++GR + E + DR+ K + PTHEE + Sbjct: 62 DLVQSNMLLAGGQKITLPILTPTALWRKTGRLEGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + S SYR LP +QI KFRDEL+ RFG+MR++EFLMKD YSFD+ E ++ + Sbjct: 122 TAMLASTSPISYRQLPLRLFQIGPKFRDELKTRFGLMRAKEFLMKDMYSFDVCEETARET 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPI 232 Y+ + +Y R+F +L + + + A++G +GG +SHE+ ++ GE + CS Sbjct: 182 YSVVNAAYDRLFKQLEVPFVKVNADTGMMGGSVSHEYHYVSAVGEDNLLQCSSCGF---- 237 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + NT+ + + P ++D+ RG+EV H F G Sbjct: 238 -AGNTEV--------VKTPASCPSCNSTDLKE--------------VRGVEVAHTFLLGD 274 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS P+ ATF GK + MG YGIG RV+AA +E + WP +AP+ + LI Sbjct: 275 KYSKPLGATFLNTKGKPQSLVMGCYGIGITRVIAAALEVLSSDHELHWPKLLAPYDVCLI 334 Query: 353 NIKAHDQVCRDACEKIYARLS-KVG--C---DVFWDDMGE-QIGSQFAVADLLGFPLQVI 405 K + +A E I L VG C ++ DD E IG + A LG PL ++ Sbjct: 335 GPKQGSKEQSEA-EMIENELVLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLIIV 393 Query: 406 VGSKFV-SDS-KVEIKHRLTGIREDMSLEEVINYAS 439 VG+K + DS K+E+ H G ++ L E + + Sbjct: 394 VGAKAIRQDSPKLEV-HTSKGETLELDLSETLKLVA 428 >gi|187924092|ref|YP_001895734.1| Proline--tRNA ligase [Burkholderia phytofirmans PsJN] gi|187715286|gb|ACD16510.1| Proline--tRNA ligase [Burkholderia phytofirmans PsJN] Length = 380 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 129/429 (30%), Positives = 201/429 (46%), Gaps = 63/429 (14%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 Q+N R + L + ++HQ + G+YSW+ LG +A V +++REE R G E+ + Sbjct: 15 QDNTR---LELTDLARKACLVHQDAAGLYSWMSLGLRAQRRVESVVREEMERAGFCEIQM 71 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 LQ ADLW ++GR D+YG E++RL R+ + G T EE+ T + R+H ++ Sbjct: 72 SLLQDADLWRQTGRLDAYGDELMRLTSRSGRLFCLGATCEELATQMVRTHYNRT-DMSLG 130 Query: 132 FYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 YQ K+RDELR R G+ R++EF+MKD YSF+ T +G++ +Y + +YLRIF RLGL Sbjct: 131 LYQFGNKYRDELRTRGGLARAKEFIMKDGYSFNATEDGARAAYEAVREAYLRIFRRLGLD 190 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 +I +++G IGG S E F + SE Sbjct: 191 AIVKSSDNGEIGGQSSEE--------------------FHVVSE---------------- 214 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 L E++ +E HIF G +YS M + K + Sbjct: 215 -------------------LGEDETDGQTSLECAHIFDLGDRYSKAMGLV----NAKGKF 251 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 V+MG +G+G R+ ++ D +G +S F + L I Q ++A E + Sbjct: 252 VRMGCFGVGISRLAMLLLSRQRDERGFWGSESFNTFDVVLTVIDWERQERQEAAETLRRE 311 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G V DD Q G + A A+L+ +V+V K ++ + E R T R D S Sbjct: 312 LQAAGLSVLMDDRLAQAGKKLADAELIACRQRVVVSGKALASGRFEWMDRRTFARRDASA 371 Query: 432 EEVINYASH 440 E++ + Sbjct: 372 AEIVTLCAR 380 >gi|57242133|ref|ZP_00370073.1| prolyl-tRNA synthetase [Campylobacter upsaliensis RM3195] gi|57017325|gb|EAL54106.1| prolyl-tRNA synthetase [Campylobacter upsaliensis RM3195] Length = 568 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 101/225 (44%), Positives = 140/225 (62%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+++ P +E P+DA + SH + R G I Q+ G+Y++LPLG+ + II+EE Sbjct: 1 MKFSQFYAPTFKEAPKDATLPSHIFLTRAGFIEQNGSGLYNFLPLGKMVYSKIENIIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E S+ A W ESGRY+ +GKE+LR DR + + GPTHEE M ++ ++ Sbjct: 61 MDKAGALETSLSFTTPASFWQESGRYNVFGKELLRFKDRKENDFVLGPTHEEAMLNVVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REF+MKDAYSF E + M + Sbjct: 121 KITSYKQLPLNLYQIGLKFRDEARPRFGLLRCREFVMKDAYSFHKDEEDLTREFENMQGT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCS 224 Y +I RL L + A+SG IGG S EF+VLA GE + CS Sbjct: 181 YSKILKRLELDFRIVEADSGAIGGSGSKEFMVLAQNGEDDILLCS 225 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 1/147 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K ++GIEVGHIF GTKYS M ATF +GK MG YG+G R+VA +E+S D Sbjct: 401 KLTKSKGIEVGHIFKLGTKYSAAMQATFLDENGKAKPFVMGCYGMGVSRLVAVAVEASFD 460 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 +GI+W ++++PFK+ +I D+ + +Y L K+G +V DD E+ G + Sbjct: 461 ERGIVWQEALSPFKLVIILSNIKDEKALNLGISLYEDLRKLGINVLLDDRNERYGVKMND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +L+GF +I+G K + ++++E+ R Sbjct: 521 FELMGFNYALIIG-KSLENNELELVKR 546 >gi|322392576|ref|ZP_08066036.1| proline--tRNA ligase [Streptococcus peroris ATCC 700780] gi|321144568|gb|EFX39969.1| proline--tRNA ligase [Streptococcus peroris ATCC 700780] Length = 617 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 99/213 (46%), Positives = 141/213 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM VP L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLVPALLSADLWRESGRYETYGEDLYKLKNRESSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG+ S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGEDSQEFMAI 213 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGTDVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ I L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEASLALTNHIEEALVNKGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K ++ VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AAEGIVEVKIKATG 597 >gi|312867906|ref|ZP_07728110.1| proline--tRNA ligase [Streptococcus parasanguinis F0405] gi|311096310|gb|EFQ54550.1| proline--tRNA ligase [Streptococcus parasanguinis F0405] Length = 616 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 100/216 (46%), Positives = 139/216 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKGIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRYD+YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYDTYGEDLYKLKNREGSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 Y RIF R GL + + G +GG S EF+ + T Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPT 216 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 19/188 (10%) Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 +TA Y +V ++ P+ K V ARGIE+GHIF GT+YS M A +G+ Sbjct: 414 FTAEYVDIREVREGEIS---PDGKGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRA 470 Query: 310 HYVQMGSYGIGAMRVVAAVIES--------SHDGK-----GIIWPDSVAPFKISLINIKA 356 + MG YGIG R+++AV+E + G+ GI +P +APF + LI + Sbjct: 471 VPIIMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNV 530 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D+ +I L G +V DD E+ G +F+ +DL+G P++V VG K ++ V Sbjct: 531 KDEASLALTNRIEEALVNKGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIV 589 Query: 417 EIKHRLTG 424 E+K + TG Sbjct: 590 EVKIKATG 597 >gi|320008235|gb|ADW03085.1| prolyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331] Length = 565 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 105/238 (44%), Positives = 144/238 (60%), Gaps = 10/238 (4%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE +HKL++R G + + + GI+SWLPLG+K L+NV ++REE Sbjct: 6 RMSRLMIKTLRDDPADAETLNHKLLVRAGYVRRTAAGIWSWLPLGKKVLENVTRVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ +P L + + SGRYD YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGGQEVLLPALLPKEAYEASGRYDEYGDLLFRLQDRKGADYLLGPTHEEIFTQVVKDM 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG +Y +Y Sbjct: 126 CSSYKDLPVILYQIQTKYRDEARPRAGVLRGREFQMKDSYSFDTTDEGLAEAYQLHRAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +RIF RLGL + A SG +GG S EF+ A GE F+D P N D+ Sbjct: 186 IRIFERLGLDHRVVSAVSGAMGGSASEEFLAPAPAGEDT------FVDCP----NCDY 233 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 91/165 (55%), Gaps = 8/165 (4%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ S G GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 405 RAIEIGHIFQLGRKYADIFSLDVLGQQGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLC 464 Query: 340 WPDSVAPFKISLINI-KA-HDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVAD 396 WP +AP + ++ KA ++ D EK L+ G V DD G G +F ++ Sbjct: 465 WPREIAPADVHVVAAGKALQTELALDVSEK----LNAAGLRVLVDDRAGVSPGVKFTDSE 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 L+G P +++V + ++ +E+K R TG RE+++++E I + R Sbjct: 521 LIGVP-KILVAGRRSAEGVLELKDRRTGEREELTVDEAIARLTDR 564 >gi|296110429|ref|YP_003620810.1| prolyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] gi|295831960|gb|ADG39841.1| prolyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] Length = 571 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 144/224 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+L+L+ G I + G++S+LPL ++ L+ + IIREE Sbjct: 1 MKQSKLLMPTLREVPADAEVKSHQLLLKAGFIRPVAAGMFSYLPLAKRVLNKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A EM VP + A+LW +SGRY +YG ++ + +R D+ I GPTHEE T + Sbjct: 61 MANIDANEMLVPEVLPAELWQKSGRYATYGPDLYKFKNRQDRDFILGPTHEETYTQLMAD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R+REF+MKDAYSF EG +++ M + Sbjct: 121 EIKSYKKLPLTVYQIQPKFRDENRPRFGLLRTREFIMKDAYSFSADQEGLDQTFHAMENA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y+ IF R+G+ + ++G +GG S EF A GE + S Sbjct: 181 YINIFDRIGISYRAIVGDAGAMGGSDSKEFSAPAAAGEDTIAYS 224 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 1/167 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIE+GHIF GT+YS M A +G+ + MGSYGIG R+++A+ E D G++ Sbjct: 406 KGIEIGHIFKLGTRYSKAMGAQVLDENGRQTDMIMGSYGIGVSRLLSAIAEQKADDLGLV 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP S+APF + ++ + D ++ L G +V DD E+ G +FA ADL+G Sbjct: 466 WPASIAPFDVHIVPVNMKDDEQSRVANQLETLLMAQGLEVLVDDRKERAGVKFADADLIG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 P+++ VG K D VE+K R + +M + EV++ S + ++ Sbjct: 526 LPIRITVGKKAGEDI-VEVKVRASNTNIEMRMSEVVDSVSVLLNGDK 571 >gi|261417283|ref|YP_003250966.1| prolyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373739|gb|ACX76484.1| prolyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327884|gb|ADL27085.1| proline--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 564 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 100/226 (44%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SKYF L+E P DA + SH ++R G I S GIYS +P+G + + + IIREE Sbjct: 1 MKLSKYFYVTLRETPSDATMPSHIFLMRGGYIKPVSTGIYSMMPIGYRVIQKIVNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G IE+ +P +Q+A+LW ESGRY + G+E+LR DRN+ M+ THEE MTD+ R Sbjct: 61 MNKIGGIEVDLPVVQTAELWSESGRYQAIGEELLRFKDRNNHNMVLAMTHEEAMTDLVRY 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQ + K+RDE R R G++R REFLMKDAYSF + E Y + + + Sbjct: 121 VLNSYKQLPVMLYQFKTKYRDEARARGGLIRVREFLMKDAYSFHTSQEDLDRHYQEEYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 YLRI+ R+G++ + +++++G +GG ++HEF++ GE + C K Sbjct: 181 YLRIYRRVGIEPVVVQSDTGIMGGKVAHEFMLDTPNGEDYLILCKK 226 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 95/165 (57%), Gaps = 1/165 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+G+IF GTK+S M A F A+ MG YGIG R++A+V+E+SHD G Sbjct: 400 TRGIEMGNIFKLGTKFSESMGAKFLTAEKTTAPAIMGCYGIGVGRLMASVVENSHDDFGP 459 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP S+APF++ ++ I ++ A EK L G DV DD E+ G +F ADL Sbjct: 460 IWPKSIAPFQVEIVPIGKEAELMELA-EKFEKELEAAGIDVLVDDRDERPGVKFKDADLW 518 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P+++ +G K +++ +VE K R + +E+VI A F+ Sbjct: 519 GSPVRIAIGKKGLANGEVEWKFRNEKQFTMVKVEDVIAKAKEYFA 563 >gi|328885400|emb|CCA58639.1| Prolyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712] Length = 566 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 106/238 (44%), Positives = 145/238 (60%), Gaps = 10/238 (4%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + GI+SWLPLG+K L N+ I+REE Sbjct: 8 RMSQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGIWSWLPLGKKVLSNIERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+++P L + + +GR+D YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVTLPALLPREPYEATGRWDEYGAELFRLQDRKGGDYLLGPTHEEIFTLLVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ KFRDE RPR G++R REFLMKD+YSFD EG SY +Y Sbjct: 128 CSSYKDLPVILYQIQNKFRDEARPRAGILRGREFLMKDSYSFDTEDEGLAQSYALHRQAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 R+F RLGL + A +G +GG S EF+ A+ GE F D P N DF Sbjct: 188 QRVFERLGLDYRIVAATAGAMGGSKSEEFLAPAEAGEDT------FADCP----NCDF 235 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 88/158 (55%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ + G +GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 408 RAIEIGHIFQLGRKYADALKLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADEKGLC 467 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP VAP + + + A + + ++ +LS G V DD G G +F A+L+ Sbjct: 468 WPAEVAPADVHV--VAAGKALQTELALEVSDKLSAAGLRVLVDDRAGVSPGVKFTDAELM 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P +++V + + VE+K R TG RE++++EE + Sbjct: 526 GVP-KILVAGRRSGEGIVELKDRRTGDREELTVEEALT 562 >gi|328907631|gb|EGG27395.1| proline--tRNA ligase [Propionibacterium sp. P08] Length = 585 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 103/225 (45%), Positives = 143/225 (63%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + L + AI REE Sbjct: 4 RMSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVLRRIEAICREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 64 AGIGAQEVSFPALLASDPYKETGRWAEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y Sbjct: 124 YSSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDDAYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +RIF+RLG ++A SGP+GG S EF+ +A GE S D Sbjct: 184 IRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVHSAD 228 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 85/146 (58%), Gaps = 2/146 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 422 SRGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 481 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP VAPF + ++ + D +I + L++VG +V DD G +FA +++L Sbjct: 482 VWPREVAPFDVQVLATGKGTDIL-DEATRIASELAEVGLEVLLDDRKASPGVKFADSEIL 540 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G P V+VG + + D VE++ R TG Sbjct: 541 GVPTSVVVG-RGLKDGLVEVRDRATG 565 >gi|282861434|ref|ZP_06270499.1| prolyl-tRNA synthetase [Streptomyces sp. ACTE] gi|282564092|gb|EFB69629.1| prolyl-tRNA synthetase [Streptomyces sp. ACTE] Length = 566 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 112/275 (40%), Positives = 157/275 (57%), Gaps = 17/275 (6%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE +HKL++R G + + + G++SWLPLG+K L+NV+ ++REE Sbjct: 6 RMSRLMIKTLRDDPADAETLNHKLLVRAGYVRRTAAGLWSWLPLGKKVLENVSRVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ +P L + + SGRYD YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGGQEVLLPALLPKEPYEASGRYDEYGDLLFRLRDRKGAEYLLGPTHEEIFTQVVKDM 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG SY +Y Sbjct: 126 CSSYKDLPVILYQIQTKYRDEARPRAGVLRGREFQMKDSYSFDTTDEGLAESYQLHRAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK----------DFMDF 230 +RIF RLGL + A SG +GG S EF+ A GE T V C ++ Sbjct: 186 IRIFERLGLDHRIVSAVSGAMGGSASEEFLAPAPAGEDTFVDCPNCDYAANTEAVTYVAT 245 Query: 231 PI------PSENTDFDDIISLNSIVEQWTAPYAAT 259 P P E D D ++ S+ + P +AT Sbjct: 246 PAEAPAAGPVEELDTPDTPTIESLADFLGVPASAT 280 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 8/159 (5%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ S G GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 406 RAIEIGHIFQLGRKYADIFSLDVLGQQGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLC 465 Query: 340 WPDSVAPFKISLINI-KA-HDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVAD 396 WP VAP + ++ KA ++ D EK L G V DD G G +F ++ Sbjct: 466 WPREVAPADVHVVAAGKALQTELALDVSEK----LGAAGLRVIVDDRAGVSPGVKFTDSE 521 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G P +++V + ++ +E+K R TG RE+++++E + Sbjct: 522 LIGVP-KILVAGRRSAEGVLELKDRRTGEREELTVDEAL 559 >gi|94968092|ref|YP_590140.1| prolyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] gi|122986393|sp|Q1IST4|SYP_ACIBL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|94550142|gb|ABF40066.1| prolyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] Length = 587 Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 105/220 (47%), Positives = 143/220 (65%), Gaps = 1/220 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+P L+E P DAE+ASHK ++R G I Q + GIYS+L LG ++++ + I+REE Sbjct: 3 RWSKLFIPTLREAPADAEVASHKFLVRAGYIRQLAAGIYSYLFLGNRSMNKIIGIVREEM 62 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 ++ G E +P L ++W SGR+ G M RL DR + G THEE+MT+I R Sbjct: 63 DKIGQ-EYYLPALNPREIWEASGRWAVMGDNMFRLKDRKGAELCLGMTHEEIMTEIARKE 121 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SY+ LP +YQIQ KFRDE RPR G++R R+F+MKD+YSFD+ G SY K +Y Sbjct: 122 LRSYKQLPQIWYQIQTKFRDEPRPRSGLLRVRQFIMKDSYSFDIDAAGLDISYQKHHDAY 181 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 RIF R GLK + + A+SG +GG S EF+V D GE V Sbjct: 182 CRIFDRCGLKYVVVHADSGAMGGSGSQEFMVYTDAGEDLV 221 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 89/157 (56%), Gaps = 1/157 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +E+GHIF G KY+ M A DGK+ MGSYGIG R++ A +E S+D G Sbjct: 421 GKTVEIGHIFKLGYKYTDAMGARVLDKDGKEVMPIMGSYGIGMERILTASVEQSNDDNGF 480 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 P +APF++ + D+ E+I A+L G DV DD E+ G +F ADL+ Sbjct: 481 WLPAQIAPFEVVVTPTNVSDEKLAKGAEEIAAKLEAAGFDVILDDRDERPGVKFKDADLV 540 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P+++ VG KFV + KVE+ HR T D ++ E++ Sbjct: 541 GIPVRINVGKKFV-EGKVEVIHRSTRESLDATIPEIV 576 >gi|32491346|ref|NP_871600.1| prolyl-tRNA synthetase [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|81844435|sp|Q8D1V9|SYP_WIGBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|25166553|dbj|BAC24743.1| proS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 561 Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 114/290 (39%), Positives = 165/290 (56%), Gaps = 6/290 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y+L L+++P + E SH+LM+R+GMI + S G+Y+WLP G + L + IIR E Sbjct: 1 MRTSQYYLATLKDSPSETEGISHRLMIRSGMIRKLSSGLYAWLPTGFRVLKKIENIIRHE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q + +W SGRY+ YG E+L+ DR K + PTHEEV++ I Sbjct: 61 MNKIGAIEILMPIIQPSLIWKNSGRYEEYGLELLKFYDRKKKQFVLAPTHEEVISKIILK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I + P FYQI KFRDE RPR G MRS+EF+MKD+YSF L + + +Y+ M + Sbjct: 121 EINFNKVFPINFYQIYSKFRDEARPRCGTMRSKEFVMKDSYSFHLNEKSLEKTYHIMQET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN--TD 238 Y +IF+RL L +RA++G IGG +SHEF + + + K D N Sbjct: 181 YKKIFNRLNLDYFVIRAKTGKIGGFISHEFHAYYNKSDVLINSYKKIFD----KNNIINK 236 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 F I + +++E TSD+ + D K + IE H F Sbjct: 237 FKKKIEIKNLIEINAEDILLTSDLAKKFNIDIKQIIKILLVHSIEKNHPF 286 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/145 (37%), Positives = 87/145 (60%), Gaps = 2/145 (1%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 IE+GHIF G KYS P++ + D + MG YGIG R+V+ IE ++D GIIW Sbjct: 395 SIEIGHIFQLGDKYSKPLNYSL-LKDYNKKKIFMGCYGIGISRLVSTYIEQNYDSNGIIW 453 Query: 341 PDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 + +APFK+++I I + + ++ E+IY +L + DV + D E+ G F+ +L+G Sbjct: 454 NEEIAPFKVAIIPININFSIKVKNFSEEIYYKLCNLKIDVLFYDNVERPGIMFSNIELIG 513 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTG 424 P +I+ K + +S +E K+R+TG Sbjct: 514 IPHILIISDKNLKNSIIEYKNRITG 538 >gi|225166271|ref|ZP_03727968.1| Proline--tRNA ligase [Opitutaceae bacterium TAV2] gi|224799484|gb|EEG18016.1| Proline--tRNA ligase [Opitutaceae bacterium TAV2] Length = 302 Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 103/231 (44%), Positives = 157/231 (67%), Gaps = 9/231 (3%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+YF+P L+E+P DAEIASHKL++R G++ + S G+Y+++PLG +AL ++ I REE Sbjct: 3 RWSQYFIPTLKESPADAEIASHKLLVRAGLVRKLSGGLYTFMPLGLRALHKISQICREEI 62 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR--------NDKAMIYGPTHEEV 113 + G IE+ +P L A+LW + R+ + +E++ AD D + GPTHEE+ Sbjct: 63 DAGGGIELWMPHLHPAELWEQGPRWAA-AREIMFRADSAGDGKRAPRDPEFVLGPTHEEI 121 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 +T + +S I SYR+LP FYQI KFR+E+RPR+G+MR+REF+M DAYSFD+ + + + Sbjct: 122 ITPLVKSEISSYRDLPKNFYQIATKFRNEIRPRYGLMRAREFVMMDAYSFDVDDDSAVKA 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y M +Y + F RLG+++I + A++G +GG SHEF+V A+ G+ V S Sbjct: 182 YFAMKTAYEKFFARLGVQAIAVEADTGVMGGSYSHEFMVPAEVGDDDVIYS 232 >gi|329936661|ref|ZP_08286368.1| prolyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] gi|329303891|gb|EGG47774.1| prolyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] Length = 564 Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 112/272 (41%), Positives = 157/272 (57%), Gaps = 6/272 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + ++S GI+SWLPLG+K LDNV+ ++REE Sbjct: 6 RMSRLLVKTLRDDPADAETLSHKLLVRAGYVRRNSAGIWSWLPLGKKVLDNVSRVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + S R++ YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGAQEVLLPALLPKEPYEASARWEEYGDLLFRLKDRKGGEYLLGPTHEEIFTLVVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG SY +Y Sbjct: 126 VSSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTTDEGLAESYRLHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +IF RLGL + A SG +GG S EF+ A GE F+D P + + Sbjct: 186 QKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDT------FVDCPNCDYAANTEA 239 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + VE P A D + +SL E Sbjct: 240 VTFALTPVEGAAHPAAEELDTPDTPTIESLAE 271 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 87/159 (54%), Gaps = 8/159 (5%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G +GK V MGSYGIG R VAA+ E D +G+ Sbjct: 406 RAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQHADEQGLY 465 Query: 340 WPDSVAPFKISLINI-KA-HDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 WP +AP + ++ KA ++ D EK L+ G V D+ G G +F A+ Sbjct: 466 WPKEIAPADVHVVAAGKALQTELALDVSEK----LAAAGVRVLVDERSGVSPGVKFTDAE 521 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G P Q++V + + VE+K R TG RE++++EE I Sbjct: 522 LIGVP-QILVAGRRSGEGVVELKDRRTGEREELTVEEAI 559 >gi|300780959|ref|ZP_07090813.1| proline--tRNA ligase [Corynebacterium genitalium ATCC 33030] gi|300532666|gb|EFK53727.1| proline--tRNA ligase [Corynebacterium genitalium ATCC 33030] Length = 611 Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 104/223 (46%), Positives = 139/223 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+YSWLPLG KA+ N+ I+REE Sbjct: 17 RLSTLFLRTLREDPADAEVPSHKLLVRAGYIRRAAPGVYSWLPLGLKAVRNIEEIVREEM 76 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + + R+ YG ++ RL DR M+ GPTHEE+ T + Sbjct: 77 NAIGAQELLFPALLPREPYEATNRWTEYGDDLFRLQDRKGTDMLLGPTHEEMFTLAVKDL 136 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T EG SY +Y Sbjct: 137 YSSYKDFPVTLYQIQTKYRDEARPRAGILRGREFVMKDSYSFDMTDEGLSESYAAHRRAY 196 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 IF R+GLK +A SG +GG S EF+ +D GE S Sbjct: 197 QAIFDRVGLKYEICQATSGAMGGSASEEFLAYSDNGEDTFVVS 239 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 80/144 (55%), Gaps = 3/144 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ M +GK MGSYGIG R++A + E HD KG+ Sbjct: 442 ARGIELGHIFQLGRKYTEAMDVQILDENGKRAVPTMGSYGIGVTRMLAVIAEQLHDDKGL 501 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 +WP +AP+++ L + D +A E++ G DV DD + G +F A+L Sbjct: 502 VWPVEIAPYQVHL-AVANKDAAAMEASERLVGEFEAAGIDVLVDDRPKVSPGVKFKDAEL 560 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 LG P VI+G F +D +E++ R Sbjct: 561 LGMPFIVILGRSF-ADGIIELRIR 583 >gi|320105902|ref|YP_004181492.1| prolyl-tRNA synthetase [Terriglobus saanensis SP1PR4] gi|319924423|gb|ADV81498.1| prolyl-tRNA synthetase [Terriglobus saanensis SP1PR4] Length = 613 Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 107/225 (47%), Positives = 144/225 (64%), Gaps = 1/225 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+P L+E P DA +ASH+++LR G + Q G+YS+L L ++++ + AI+REE Sbjct: 30 RWSKLFIPTLREAPADAVVASHQILLRAGYVRQLGAGLYSYLFLATRSINKIVAIVREEM 89 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G EM +P L A++W ESGR+ G M RL DR + G THEEVMT I RS Sbjct: 90 DRIGQ-EMYLPALNPAEVWQESGRWTGMGDNMFRLKDRKGADLCLGMTHEEVMTSIARSE 148 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 I+SY+ LP +YQIQ KFRDE RP+ G++R R+F MKD+YSFDL EG SY +Y Sbjct: 149 IRSYKQLPQIWYQIQTKFRDEPRPKSGLLRVRQFTMKDSYSFDLNEEGLDVSYKLHDEAY 208 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 IF R GL + + A+SG +GG S EF+V + GE + S D Sbjct: 209 RCIFTRCGLSFVAVEADSGAMGGSQSQEFMVYTEAGEDLIASSPD 253 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 84/165 (50%), Gaps = 9/165 (5%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +E+GHIF G KY+ M A +GK+ MG YGIG R++ A +E S G+ Sbjct: 441 GKAVEIGHIFKLGYKYTESMGARVLDQNGKETMPIMGCYGIGIERILTAAMERSAASMGL 500 Query: 339 --------IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 P S+APF++ + K D +A E I L G DV DD + G Sbjct: 501 SDRGDIRYALPASIAPFQVIVTVTKQSDATLAEAGETIAKALDSAGFDVLLDDRDQSAGV 560 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +F ADL+G P +V VG K V D VE+ RLTG + ++ EV+ Sbjct: 561 KFKDADLIGVPYRVNVGKKLV-DGLVELVDRLTGNTIECAVNEVV 604 >gi|297156817|gb|ADI06529.1| prolyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1] Length = 566 Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 116/275 (42%), Positives = 158/275 (57%), Gaps = 17/275 (6%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L L+E+P DAE ASHKL++R G + + S GI++WLP+G+K L+NV I+REE Sbjct: 6 RMSRLMLKTLREDPADAETASHKLLVRAGYVRRTSAGIWTWLPIGKKVLENVARIVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + R+ DR + GPTHEE+ T + Sbjct: 66 DAIGAQEVLLPALLPREPYEASGRWEEYGDLLFRIKDRKGADYLLGPTHEEIFTQTVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG SY +Y Sbjct: 126 CTSYKDLPVILYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTTDEGLAESYRLHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK-DFMD---------F 230 RIF RLGL + A SG +GG S EF+ A GE T V C D+ Sbjct: 186 QRIFERLGLDYRIVSAISGAMGGSASEEFLAPAAAGEDTFVDCPNCDYAANTEAVTLALT 245 Query: 231 PI------PSENTDFDDIISLNSIVEQWTAPYAAT 259 P+ P E D D +++++ E P +AT Sbjct: 246 PVEGAEHGPVEELDTPDTPTIDTLAEHLNIPASAT 280 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G +GK V MGSYGIG R VAA+ E +HD G+ Sbjct: 408 RAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTHDESGLC 467 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP VAP + + + A + + ++ +L G V DD G G +F A+L+ Sbjct: 468 WPREVAPADVHI--VAAGKALQTELALELADKLGTAGVRVMVDDRAGVSPGVKFTDAELI 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P ++VG + D VE+K R TG RE++ ++E ++ Sbjct: 526 GVPTILVVG-RGAKDGVVELKDRRTGEREELPVDEALS 562 >gi|307179779|gb|EFN67969.1| Probable prolyl-tRNA synthetase, mitochondrial [Camponotus floridanus] Length = 422 Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 142/455 (31%), Positives = 228/455 (50%), Gaps = 52/455 (11%) Query: 4 SKYFLPI---LQENPRDAEIA-SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 SK F P+ L + EI+ SHKLM++ G+I + G+Y+ LPLG + L+ + ++ + Sbjct: 2 SKIFQPMATELSDTGDKTEISRSHKLMIKYGIIKPCNVGMYALLPLGMRVLNKLINLVDK 61 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E GA ++ +P L S LW ++ RYDS E+ + DR++K I PT+EE + D+ Sbjct: 62 EMTNLGAEKILLPALTSTSLWKKTNRYDSNKNELFTIKDRHEKEYILSPTYEEAICDLIS 121 Query: 120 SHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S S + LP YQI K+RDE++PR G +RSREF+MKD Y+FD + ++++Y+ + Sbjct: 122 STGSLSTKLLPLRLYQISSKWRDEMKPRLGFLRSREFIMKDLYTFDTNLDNAQYTYDLVC 181 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENT 237 SY IF ++G+K + + G IGG +SHE+ +++ GE + C + Sbjct: 182 ESYNNIFKQIGIKYEKVIGDVGTIGGLISHEYHYISNIGEDVILQCPSCYF--------- 232 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI--EVGHIFYFGTKYS 295 S+N + + T + P+ K R I E+GH F KYS Sbjct: 233 ------SINQTISKTT----------------NCPQCKNELQRHIAAEIGHTFLLNIKYS 270 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 P+ A + + V MG +G+G R++ IE I WP +AP+ + +I K Sbjct: 271 QPLKAMYVEQNELKPVV-MGCFGLGLSRIIMLTIEILSTINEIRWPVKLAPYTVCIIPPK 329 Query: 356 AHDQVCRDACEKIYARLSKVGC----DVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKF 410 A + + K +LS++ C D DD IG +F +A LGFP +I+G Sbjct: 330 AGSK--EENSSKYIEQLSEILCKRDIDTVLDDRTHLTIGKRFVLARALGFPYIIIIGKAS 387 Query: 411 V-SDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 S E+ + ++SLE++ +H F N Sbjct: 388 TRSIPSFEVHDINNSVTNELSLEQI----NHYFDN 418 >gi|257055068|ref|YP_003132900.1| prolyl-tRNA synthetase [Saccharomonospora viridis DSM 43017] gi|256584940|gb|ACU96073.1| prolyl-tRNA synthetase, family II [Saccharomonospora viridis DSM 43017] Length = 586 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 103/217 (47%), Positives = 137/217 (63%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G + + + G YSWLPLG + L NV AI+REE Sbjct: 4 RMSSLFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGGYSWLPLGLRVLRNVEAIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + +GR+ YG + RL DR + GPTHEE+ + Sbjct: 64 DAIGAQEIQFPALLPKEPYETTGRWTEYGPSLFRLVDRKGADYLLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFDL EG SY +Y Sbjct: 124 YSSYKDYPVILYQIQTKYRDEARPRAGILRGREFIMKDSYSFDLDDEGLARSYELHRNAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 LRIF RLGL + + A SG +GG S EF+ +A+TGE Sbjct: 184 LRIFDRLGLDYVVVAATSGAMGGSASEEFLAVAETGE 220 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 95/161 (59%), Gaps = 2/161 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V+ARGIE+GHIF G KY+ G D K + MGSYGIG RVVAA+ E HD Sbjct: 417 VTARGIEIGHIFQLGRKYTDAFEVDALGPDSKPIRITMGSYGIGVSRVVAAIAEQHHDEL 476 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G++WP SVAP + ++ I D + E++ A+L++ G V DD G +FA A+ Sbjct: 477 GLVWPRSVAPADVHVV-IAGKDDAVTEGGERLAAQLAERGVRVLLDDRKATPGVKFADAE 535 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 L+G P V+VG + ++ VE+K R TG R +++++ + + Sbjct: 536 LIGVPTIVVVG-RGLAKGVVEVKDRATGERTEVAVDSAVGH 575 >gi|237785730|ref|YP_002906435.1| prolyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] gi|237758642|gb|ACR17892.1| Prolyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] Length = 594 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 139/223 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ SHKL++R G I + + G+YSWLPLG K L N+ I+REE Sbjct: 8 RMSSLFVRTLREDPADAEVPSHKLLVRAGFIRRIAPGVYSWLPLGLKVLRNIERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L D + +GR+ YG + RL DR + GPTHEE+ T+ + Sbjct: 68 DGIGAQEIELPALLPRDAYEVTGRWTEYGDALFRLKDRKKGDYLLGPTHEEIFTETVKGE 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+M D+YSFD+ EG + SY K +Y Sbjct: 128 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMCDSYSFDMKDEGLEESYQKHRAAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 R+F+RLGL A SG +GG S EF+ ++ GE S Sbjct: 188 QRMFNRLGLDYAICAATSGAMGGSASEEFLAVSPVGEDTFVTS 230 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIE+GHIF G KY+ +GK MGSYG+G R+VA V E HD KG+ Sbjct: 431 QGIEIGHIFQLGRKYTNAFELDVLDENGKRSRPTMGSYGVGVSRLVAVVAEQYHDDKGLK 490 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP SVAPF + L+ + D +A + LS G D+ +DD + G +F ++LL Sbjct: 491 WPVSVAPFPVHLV-VANKDAEAAEAASTLAEELSNRGLDILFDDRPKVSPGVKFKDSELL 549 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P V++G F + K+E++ RL E + +++ + Sbjct: 550 GMPYVVVLGRAF-KEGKIEVRDRLADSVETVPVDDAAEH 587 >gi|295693140|ref|YP_003601750.1| prolyl-tRNA synthetase [Lactobacillus crispatus ST1] gi|295031246|emb|CBL50725.1| Prolyl-tRNA synthetase [Lactobacillus crispatus ST1] Length = 565 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 103/225 (45%), Positives = 140/225 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L II +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEGIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFDDQKNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 2/161 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++A +E +G+ WP Sbjct: 406 IEVGHIFKLGTYYTKTMGADFLDQNGKAKPVIMGSYGIGVTRMLSAAVEQHLTERGVAWP 465 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF I ++ +K + + + EK+ + S+ DV +DD E+ G +FA ADL+G P Sbjct: 466 KEIAPFAIHIVQMKMNKEDQTELAEKLEKKFSE-KYDVLYDDRKERAGVKFADADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +++ +G K +D VE+K +MS++E+ + + Sbjct: 525 IRITIGKK-AADGIVEVKRPTDNKATEMSIDELDKFVNQEL 564 >gi|309811510|ref|ZP_07705292.1| proline--tRNA ligase [Dermacoccus sp. Ellin185] gi|308434561|gb|EFP58411.1| proline--tRNA ligase [Dermacoccus sp. Ellin185] Length = 587 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 101/217 (46%), Positives = 141/217 (64%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ HKL++R G I + + G+Y+WLPLG K L NV I+REE Sbjct: 4 RMSNLFLRTLREDPADAELPGHKLLVRAGYIRRAAPGVYTWLPLGLKVLRNVETIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+S P L + + + R+D YG + RL DR M+ GPTHEE+ T + Sbjct: 64 EAIGAQELSFPALLPREPYEATNRWDEYGPNLFRLQDRKGVDMLLGPTHEEMFTITVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T +QIQ K+RDE RPR G++R REF+MKD+YSFD T +G + SY K +Y Sbjct: 124 FSSYKDLPTTLFQIQTKYRDEARPRAGLLRGREFIMKDSYSFDHTKQGLEESYAKHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 ++IF RLG + + + A+SG +GG S EF+ ++ GE Sbjct: 184 VKIFDRLGFEYVVVHADSGAMGGSASEEFLAVSRHGE 220 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 3/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF GTKY+ + +GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 422 ARGIEMGHIFQLGTKYAEALGLKVLDENGKLVTVTMGSYGIGVSRAVAAIAEDNLDDKGL 481 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 IWP +APF + ++ D + E++ A L G V +DD + G +F A+L Sbjct: 482 IWPRHIAPFDVHVVAT-GKDAAVFEKAEQVVADLESAGLGVLFDDRPKVSPGVKFKDAEL 540 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G P V++G + +SD +E+K R +G D+ ++EV Sbjct: 541 IGVPTIVVLG-RGLSDGTIEVKDRRSGTSRDVGVDEV 576 >gi|227878822|ref|ZP_03996729.1| prolyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256843344|ref|ZP_05548832.1| prolyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256849837|ref|ZP_05555268.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|262046917|ref|ZP_06019877.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|293381211|ref|ZP_06627219.1| prolyl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|312978246|ref|ZP_07789990.1| proline--tRNA ligase [Lactobacillus crispatus CTV-05] gi|227861570|gb|EEJ69182.1| prolyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256614764|gb|EEU19965.1| prolyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256713326|gb|EEU28316.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|260572899|gb|EEX29459.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|290922251|gb|EFD99245.1| prolyl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|310894964|gb|EFQ44034.1| proline--tRNA ligase [Lactobacillus crispatus CTV-05] Length = 565 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 103/225 (45%), Positives = 140/225 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L II +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEGIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFDDQKNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 2/161 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++A +E +G+ WP Sbjct: 406 IEVGHIFKLGTYYTKTMGADFLDQNGKAKPVIMGSYGIGVTRMLSAAVEQHLTERGVAWP 465 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF I ++ +K + + + EK+ + S+ DV +DD E+ G +FA ADL+G P Sbjct: 466 KEIAPFAIHIVQMKMNKEDQTELAEKLEKKFSE-KYDVLYDDRKERAGVKFADADLVGAP 524 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +++ +G K +D VE+K +MS++E+ + + Sbjct: 525 IRITIGKK-AADGIVEVKRPTDDKATEMSIDELDKFVNQEL 564 >gi|259503119|ref|ZP_05746021.1| proline-tRNA ligase [Lactobacillus antri DSM 16041] gi|259168985|gb|EEW53480.1| proline-tRNA ligase [Lactobacillus antri DSM 16041] Length = 578 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 137/218 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +ENP DAE SH +M R G I+Q S G++++LPL + + V II+EE Sbjct: 1 MKQSKLLIPTKKENPSDAEALSHIMMERAGYIYQISAGVWAYLPLAYRVIRKVKGIIQEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA EM P++ ADLW ++GRY++YG + + D ND+ I GPT EE MT+I R Sbjct: 61 MEKAGAYEMETPSMLPADLWRQTGRYEAYGDTLYKFKDHNDREYILGPTDEEAMTEILRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQI KFR+E RPR+GV+R +EF M DAYSF EG +Y + Sbjct: 121 SVKSYKKLPLVVYQITDKFRNEPRPRYGVLRGKEFSMLDAYSFAADEEGLDEAYQAQAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y IF R GL + A+SG IGGD S EF A+ GE Sbjct: 181 YHNIFDRAGLHYKVILADSGTIGGDNSQEFSAPAEIGE 218 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/156 (39%), Positives = 93/156 (59%), Gaps = 1/156 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIE+GHIF GT YS + A +G+ + MG YGIG R+++AV E + D G++W Sbjct: 408 GIEIGHIFKLGTGYSKKLGAQVLDKNGRLVDMIMGCYGIGVTRMLSAVAEQNADENGLVW 467 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 PDS+APF + +I + A ++ +L+ G +V DD E+ G +FA +DL+G Sbjct: 468 PDSIAPFDVHVIPVNAKKDEQMAMANELEQQLTAAGYEVLVDDRKERAGVKFADSDLIGI 527 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 PL+V VG K +D VE+K R TG ++ EE++N Sbjct: 528 PLRVTVGKK-AADGIVEVKIRKTGETLEVKQEELVN 562 >gi|161507687|ref|YP_001577641.1| prolyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] gi|172048310|sp|A8YVR3|SYP_LACH4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160348676|gb|ABX27350.1| Prolyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] Length = 565 Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 103/225 (45%), Positives = 139/225 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L II +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEGIIEDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MEKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 11/208 (5%) Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 EN + D ++ V+ TA V D LP S IEVGHIF GT Y Sbjct: 368 ENANLDRDFKVDEFVDIRTANEGEPDPV------DHLPLKFTTS---IEVGHIFKLGTYY 418 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + M A F +GK V MGSYGIG R+++A +E G+ WP +APF I ++ + Sbjct: 419 TKTMGADFLDQNGKAKPVIMGSYGIGVTRMLSAAVEQHLTEHGVAWPKEIAPFAIHIVQM 478 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 K + + + EK+ + S+ DV +DD E+ G +FA ADL+G P+++ VG K +D Sbjct: 479 KMNKEDQTELAEKLEKKFSE-KYDVLYDDRKERAGVKFADADLVGAPIRITVGKK-AADG 536 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRF 442 VE+K ++S++E+ + + Sbjct: 537 IVEVKRPTDDKATEISIDELDKFVNQEL 564 >gi|260101368|ref|ZP_05751605.1| proline-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|260084820|gb|EEW68940.1| proline-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|328465729|gb|EGF36933.1| prolyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463] Length = 565 Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 103/225 (45%), Positives = 139/225 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L II +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEGIIEDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MEKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 11/208 (5%) Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 EN + D ++ V+ TA V D LP S IEVGHIF GT Y Sbjct: 368 ENANLDRDFKVDEFVDIRTANEGEPDPV------DHLPLKFTTS---IEVGHIFKLGTYY 418 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + M A F +GK V MGSYGIG R+++A +E G+ WP +APF I ++ + Sbjct: 419 TKTMGADFLDQNGKAKPVIMGSYGIGVTRMLSAAVEQHLTEHGVAWPKEIAPFAIHIVQM 478 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 K + + + EK+ + S+ DV +DD E+ G +FA ADL+G P+++ VG K +D Sbjct: 479 KMNKEDQTELAEKLEKKFSE-KYDVLYDDRKERAGVKFADADLVGAPIRITVGKK-AADG 536 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRF 442 VE+K + +MS++E+ + + Sbjct: 537 IVEVKRPIDDKATEMSIDELDKFVNQEL 564 >gi|323466334|gb|ADX70021.1| Proline-tRNA ligase [Lactobacillus helveticus H10] Length = 565 Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 103/225 (45%), Positives = 139/225 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L II +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEGIIEDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MEKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 11/208 (5%) Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 EN + D ++ V+ TA V D LP S IEVGHIF GT Y Sbjct: 368 ENANLDRDFKVDEFVDIRTANEGEPDPV------DHLPLKFTTS---IEVGHIFKLGTYY 418 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + M A F +GK V MGSYGIG R+++A +E G+ WP +APF I ++ + Sbjct: 419 TKTMGADFLDQNGKAKPVIMGSYGIGVTRMLSAAVEQHLTEHGVAWPKEIAPFAIHIVQM 478 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 K + + + EK+ + S+ DV +DD E+ G +FA ADL+G P+++ VG K +D Sbjct: 479 KMNKEDQTELAEKLEKKFSE-KYDVLYDDRKERAGVKFADADLVGAPIRITVGKK-AADG 536 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRF 442 VE+K +MS++E+ + + Sbjct: 537 IVEVKRPTDDKATEMSIDELDKFVNQEL 564 >gi|313681998|ref|YP_004059736.1| prolyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] gi|313154858|gb|ADR33536.1| prolyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] Length = 567 Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 143/224 (63%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++P +E P+DA++ SH + R G + Q + G+Y++LP+G++ L + II EE Sbjct: 1 MRFSKAYIPTTKEAPKDAQLPSHIYLSRAGFVTQVAAGLYNFLPMGKRVLRKIETIINEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A E+ + + A+LW ESGR + +GKE+LR DR D + GPTHEE+M +I R+ Sbjct: 61 MAACDAQEVDLSFVTPAELWEESGRIEKFGKELLRFRDRKDNLFVLGPTHEEMMVNIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI+ KFRDE RPRFG+MR REF+MKD YSF + E ++ M + Sbjct: 121 RVTSYKQLPLNLYQIKTKFRDEARPRFGLMRGREFVMKDGYSFHSSNEDLDREFDAMEAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y RI RLGL+ + A+SG IGG S E +VLA +GE T C Sbjct: 181 YKRILERLGLEFRIVEADSGAIGGTGSKELMVLAGSGEDTLAIC 224 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 63/151 (41%), Positives = 89/151 (58%), Gaps = 5/151 (3%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K + +GIEVGHIF GT YS P+ A F +G+ MG+YG+G R+VAAVIE HD Sbjct: 400 KILHTKGIEVGHIFKLGTVYSAPLKAEFLDENGRSQPFIMGTYGMGVSRLVAAVIEQHHD 459 Query: 335 GKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG IW + AP+ ++++ NIK + E++YA L G + DD E+ G + Sbjct: 460 EKGCIWTHATAPYLVNVMVSNIKEESHMAY--AEELYASLQSRGIETMLDDRKERFGFKM 517 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + A+L+GFP VIVG K + + V+I R T Sbjct: 518 SDAELIGFPYTVIVG-KELENGSVQIMVRAT 547 >gi|296272187|ref|YP_003654818.1| prolyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] gi|296096362|gb|ADG92312.1| prolyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] Length = 572 Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 100/226 (44%), Positives = 145/226 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P +E P DA +ASH+ ++R G I Q G+Y++LPLG+ LD + A+++EE Sbjct: 1 MKFSQMFMPTTKETPNDATLASHQYLIRGGFITQTGSGLYNFLPLGKIVLDKIRAVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + TGA E+ + + +LW +SGR G E+L+ DR + PT+EE + DI ++ Sbjct: 61 MDNTGANELLMSFVTPLELWEQSGRASVMGPELLKFKDRKGAGFVLSPTNEETVVDIVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y I KFRDE RPRFG+MR REFLMKDAYSF T E ++ M + Sbjct: 121 RITSYKDLPINLYHINTKFRDEARPRFGLMRGREFLMKDAYSFHATHEDLVREFHVMEDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y +I+ RLGL+ + A+SG IGG S EF+VLA++GE + +D Sbjct: 181 YKKIYERLGLEYRVVAADSGAIGGSGSKEFMVLANSGEDTIVVCED 226 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/163 (43%), Positives = 96/163 (58%), Gaps = 2/163 (1%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 K + +GIE GHIF GTKYS M ATF +GK MG YGIG R+VAAVIE +HD Sbjct: 405 KLIHTKGIEAGHIFQLGTKYSSAMDATFLDNNGKAQPFIMGCYGIGVSRLVAAVIEQNHD 464 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFA 393 KG IW APF + +I A + +A +KIY L G DD + + G + + Sbjct: 465 DKGCIWTKETAPFMVDVIVSNAKKEEELNAGKKIYNDLKIAGISTILDDRVNARFGFKMS 524 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +L+GFP V+VG K + + VEI +R T +E++SL+EV+N Sbjct: 525 DFELIGFPYAVVVGKK-LPEGIVEIVNRKTLEKEEVSLDEVVN 566 >gi|313836817|gb|EFS74531.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA2] gi|314929774|gb|EFS93605.1| prolyl-tRNA synthetase [Propionibacterium acnes HL044PA1] gi|314972203|gb|EFT16300.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA3] Length = 581 Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 142/223 (63%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + L + AI REE Sbjct: 2 SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVLRRIEAICREEMAG 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 62 IGAQEVSFPALLASDPYKETGRWAEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+R Sbjct: 122 SYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDDAYQAQRDAYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 IF+RLG ++A SGP+GG S EF+ +A GE S D Sbjct: 182 IFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVHSAD 224 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 85/146 (58%), Gaps = 2/146 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 418 SRGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP VAPF + ++ + D +I + L++VG +V DD G +FA +++L Sbjct: 478 VWPREVAPFDVQVLATGKGTDIL-DEATRIASELAEVGLEVLLDDRKASPGVKFADSEIL 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G P V+VG + + D VE++ R TG Sbjct: 537 GVPTSVVVG-RGLKDGLVEVRDRATG 561 >gi|260662303|ref|ZP_05863199.1| prolyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] gi|260553686|gb|EEX26578.1| prolyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] Length = 573 Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 140/218 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P +E P DAE+ SHK+M+R G I+Q S G++++LPL + + + IIREE Sbjct: 1 MKQSQMLIPTQKEAPADAEVLSHKMMVRAGYIYQVSAGVWAYLPLAYRVIRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E+ +P L ADLW ESGRYD+YG + +L DR ++ I GPTHEE +T I R Sbjct: 61 MDKAGAVEILLPGLLPADLWKESGRYDAYGDNLFKLKDRRERDFILGPTHEETVTSILRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q K+RDE RPR+G++R +EF M D YSF G +Y+ + Sbjct: 121 AIHSYKKLPLVVYQLQDKYRDEDRPRYGILRGKEFEMLDGYSFSADQAGLDQAYDLQAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y IF R+GL + A+SG +GG S EF A GE Sbjct: 181 YRNIFDRIGLDYKVILADSGTMGGKNSQEFSAPAAIGE 218 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 1/154 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIE+GHIF GT YS AT +G+D + MG YGIG R+++A+ E + D G++W Sbjct: 408 GIEIGHIFKLGTHYSEVFGATVLDQNGRDVPMIMGCYGIGVSRLLSAISEQNADENGLVW 467 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P +VAPF I +I + A + E+I A L + G +V DD E+ G +FA ADL+G Sbjct: 468 PQAVAPFDIHVIPVNAKKEDQMAMAEEITANLEEAGYEVLVDDRKERAGVKFADADLIGV 527 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 P++V VG K + VEIK R TG ++ EE+ Sbjct: 528 PIRVTVGKK-AGEGIVEIKIRKTGETLEVHKEEL 560 >gi|29829100|ref|NP_823734.1| prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680] gi|81838439|sp|Q82K46|SYP1_STRAW RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|29606206|dbj|BAC70269.1| putative prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680] Length = 564 Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 120/329 (36%), Positives = 172/329 (52%), Gaps = 37/329 (11%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE +HKL++R + + + GI+SWLPLG+K L+NV ++REE Sbjct: 6 RMSRLMVKTLRDDPADAETLNHKLLVRADYVRRTAAGIWSWLPLGKKVLENVARVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ +P L + + +GR++ YG E+ RL DR + GPTHEE+ T + + Sbjct: 66 DAMGGQEVLLPALLPKEPYEATGRWEEYGPELFRLKDRKGAEYLLGPTHEEIFTQLVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REFLMKD+YSFD EG SY +Y Sbjct: 126 CSSYKDLPVILYQIQAKYRDEARPRAGILRGREFLMKDSYSFDTADEGLAQSYALHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++IF+RLGL + A SG +GG S EF+ A GE F+D P + + Sbjct: 186 IKIFNRLGLDHRIVSAVSGAMGGSASEEFLAPAPAGEDT------FVDCPACDYAANTEA 239 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + VE P D + +SL E Y G +P SAT Sbjct: 240 VTFVAPAVESVEHPAVEELDTPDTPTIESLAE---------------YLG----VPASAT 280 Query: 302 FKG----ADGK--------DHYVQMGSYG 318 K ADG+ D V +G G Sbjct: 281 LKNLLVKADGEIVAVGVPGDREVDLGKLG 309 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 88/159 (55%), Gaps = 8/159 (5%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G +GK V MGSYGIG R VAA+ E + D +G+ Sbjct: 406 RAIEIGHIFQLGRKYADAFQLDVLGKEGKPVRVTMGSYGIGVSRAVAALAEQTADEQGLC 465 Query: 340 WPDSVAPFKISLINI-KA-HDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVAD 396 WP +AP + ++ KA ++ D EK L G V DD G G +F A+ Sbjct: 466 WPKEIAPADVHVVAAGKALQTELALDVAEK----LGAAGVRVLVDDRAGVSPGVKFTDAE 521 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G P Q++V + ++ +E+K R TG RE++++EE I Sbjct: 522 LIGVP-QILVAGRRSAEGVLELKDRKTGEREELTVEEAI 559 >gi|333024111|ref|ZP_08452175.1| putative prolyl-tRNA synthetase [Streptomyces sp. Tu6071] gi|332743963|gb|EGJ74404.1| putative prolyl-tRNA synthetase [Streptomyces sp. Tu6071] Length = 563 Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 113/275 (41%), Positives = 157/275 (57%), Gaps = 17/275 (6%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + + + GI+SWLPLG+K LDN++ I+REE Sbjct: 6 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRTAAGIWSWLPLGKKVLDNISQIVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGAQEVLLPALLPREPYEASGRWEEYGDLLFRLKDRKGADYLLGPTHEEIFTQVVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ+Q K+RDE RPR GV+R REF+MKD+YSFD T EG SY +Y Sbjct: 126 CTSYKDLPVMLYQVQTKYRDEARPRSGVLRGREFVMKDSYSFDTTDEGLAESYALHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE--------------TQVFCSKD- 226 +IF RLGL + A SG +GG S EF+ A GE T+ K Sbjct: 186 RKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDTFADCPNCGFAANTEAVTFKGA 245 Query: 227 FMDFPI--PSENTDFDDIISLNSIVEQWTAPYAAT 259 MD P E D D ++ S+ E P +AT Sbjct: 246 AMDGSAHGPVEELDTPDTPTIESLAEHLGVPASAT 280 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 87/157 (55%), Gaps = 4/157 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G +GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 405 RAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLC 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP VAP + + + A + + +I +L+ G V DD G G +F A+L+ Sbjct: 465 WPAEVAPADVHV--VAAGKVLQTELALEIADKLAAAGARVLVDDRAGVSPGVKFTDAELI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P VI G + ++ VE+K R TG RE++S+EE + Sbjct: 523 GVPKTVIAGRRS-AEGIVELKDRRTGEREELSVEEAV 558 >gi|284030961|ref|YP_003380892.1| prolyl-tRNA synthetase [Kribbella flavida DSM 17836] gi|283810254|gb|ADB32093.1| prolyl-tRNA synthetase [Kribbella flavida DSM 17836] Length = 587 Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 101/218 (46%), Positives = 142/218 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DAE+ SHKL++R G I + + G+Y+WLPLG + L NV I+REE Sbjct: 3 LRMSSLFLRTLREDPADAEVPSHKLLVRAGYIRRTAPGMYTWLPLGLRVLRNVEKIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ P L + + +GR+ YG + RL DR M+ GPTHEE+ T + Sbjct: 63 MDAIGAQELVFPALLPREPYEATGRWTEYGPNLFRLKDRKGADMLLGPTHEEMFTLAVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQIQ K+RDE RPR GV+R REF+MKD+YSFD+ G + SY+ + Sbjct: 123 LYSSYKDLPLSIYQIQNKYRDEARPRAGVLRGREFVMKDSYSFDVDQAGLQASYDLHRKA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y+RIF RLG + ++A SG +GG S EF+ +A+ GE Sbjct: 183 YIRIFDRLGFDYVIVQAMSGAMGGSASEEFLAVAENGE 220 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 92/161 (57%), Gaps = 5/161 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E +HD G Sbjct: 422 SARGIEMGHIFQLGQKYAEALDLKVLDQNGKLVTVTMGSYGVGVTRAVAAIAEGNHDELG 481 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI--GSQFAVA 395 +IWP + P + L+ +V A E + L G V +DD E++ G +F A Sbjct: 482 LIWPREITPADVHLVATGKETEVFAKAAE-LATELESRGLTVLYDDR-EKVSPGVKFKDA 539 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +LLG P +VG K ++D +E+K R +G R D+++ EV++ Sbjct: 540 ELLGIPTIAVVG-KGLADGTIEVKDRRSGDRTDVAVTEVVD 579 >gi|318056620|ref|ZP_07975343.1| prolyl-tRNA synthetase [Streptomyces sp. SA3_actG] gi|318080757|ref|ZP_07988089.1| prolyl-tRNA synthetase [Streptomyces sp. SA3_actF] Length = 563 Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 112/281 (39%), Positives = 155/281 (55%), Gaps = 29/281 (10%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + + + GI+SWLPLG+K LDN++ I+REE Sbjct: 6 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRTAAGIWSWLPLGKKVLDNISQIVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGAQEVLLPALLPREPYEASGRWEEYGDLLFRLKDRKGADYLLGPTHEEIFTQVVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ+Q K+RDE RPR GV+R REF+MKD+YSFD T EG SY +Y Sbjct: 126 CTSYKDLPVMLYQVQTKYRDEARPRSGVLRGREFVMKDSYSFDTTEEGLAESYALHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI--------- 232 +IF RLGL + A SG +GG S EF+ A GE F D P Sbjct: 186 RKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDT------FADCPNCGFAANTEA 239 Query: 233 --------------PSENTDFDDIISLNSIVEQWTAPYAAT 259 P E D D ++ S+ E P +AT Sbjct: 240 VTFKGAEVDGSAHGPVEELDTPDTPTIESLAEHLGVPASAT 280 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 87/157 (55%), Gaps = 4/157 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G +GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 405 RAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLC 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP V+P + + + A + + +I +L+ G V DD G G +F A+L+ Sbjct: 465 WPAEVSPADVHV--VAAGKVLQTELALEIADKLAAAGARVLVDDRAGVSPGVKFTDAELI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P VI G + ++ VE+K R TG RE++S+EE + Sbjct: 523 GVPKTVIAGRRS-AEGIVELKDRRTGEREELSVEEAV 558 >gi|184155197|ref|YP_001843537.1| prolyl-tRNA synthase [Lactobacillus fermentum IFO 3956] gi|226701302|sp|B2GBM5|SYP_LACF3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|183226541|dbj|BAG27057.1| prolyl-tRNA synthase [Lactobacillus fermentum IFO 3956] Length = 573 Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 140/218 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P +E P DAE+ SHK+M+R G I+Q S G++++LPL + + + IIREE Sbjct: 1 MKQSQMLIPTQKEAPADAEVLSHKMMVRAGYIYQVSAGVWAYLPLAYRVIRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM +P L ADLW ESGRY++YG + +L DR ++ I GPTHEE +T I R Sbjct: 61 MDKAGAVEMLLPGLLPADLWKESGRYEAYGDNLFKLKDRRERDFILGPTHEETVTSILRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q K+RDE RPR+G++R +EF M D YSF G +Y+ + Sbjct: 121 AIHSYKKLPLVVYQLQDKYRDEDRPRYGILRGKEFEMLDGYSFSADQAGLDQAYDLQAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y IF R+GL + A+SG +GG S EF A GE Sbjct: 181 YRNIFDRIGLDYKVILADSGTMGGKNSQEFSAPAAIGE 218 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/154 (42%), Positives = 91/154 (59%), Gaps = 1/154 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIE+GHIF GT YS AT +G+D + MG YGIG R+++A+ E + D G++W Sbjct: 408 GIEIGHIFKLGTHYSEVFGATVLDQNGRDVPMIMGCYGIGVSRLLSAISEQNADENGLVW 467 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P +VAPF I +I + A + E I A L + G +V DD E+ G +FA ADL+G Sbjct: 468 PQAVAPFDIHVIPVNAKKEDQMAMAEGITANLEEAGYEVLVDDRKERAGVKFADADLIGV 527 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 P++V VG K + VEIK R TG ++ EE+ Sbjct: 528 PIRVTVGKK-AGEGIVEIKIRKTGETLEVHKEEL 560 >gi|302542146|ref|ZP_07294488.1| proline-tRNA ligase [Streptomyces hygroscopicus ATCC 53653] gi|302459764|gb|EFL22857.1| proline-tRNA ligase [Streptomyces himastatinicus ATCC 53653] Length = 569 Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 114/275 (41%), Positives = 158/275 (57%), Gaps = 17/275 (6%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S L L+E+P DAE ASHKL++R G + + S GI++WLP+G+K L+NV+ I+REE Sbjct: 9 RMSTLMLKTLREDPADAETASHKLLVRAGYVRRASAGIWTWLPVGKKVLENVSRIVREEM 68 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + Sbjct: 69 DAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKDRKGGDYLLGPTHEEIFTQTVKDQ 128 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD + EG SY +Y Sbjct: 129 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTSDEGLAESYRLHREAY 188 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC-------SKDFMDFPIP 233 RIF RLGL + A SG +GG S EF+ A GE T V C + + + +P Sbjct: 189 QRIFERLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDTFVDCPNCDYAANTEAVTTAVP 248 Query: 234 S---------ENTDFDDIISLNSIVEQWTAPYAAT 259 + E D D ++ ++ E P +AT Sbjct: 249 AVEGAEHGPVEELDTPDTPTIETLAEHLGVPASAT 283 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/160 (39%), Positives = 87/160 (54%), Gaps = 8/160 (5%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G +GK V MGSYGIG RVVAA+ E + D G+ Sbjct: 411 RAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGIGVSRVVAALAEQTFDDSGLC 470 Query: 340 WPDSVAPFKISLINI-KA-HDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVAD 396 WP VAP + ++ KA ++ D EK L G V DD G G +F A+ Sbjct: 471 WPREVAPADVHIVAAGKALQTELALDLAEK----LGTAGVRVMVDDRAGVSPGVKFTDAE 526 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+G P ++VG + D VE+K R TG RE++ ++E ++ Sbjct: 527 LIGVPTILVVG-RGAKDGVVELKDRRTGDREELPIDEALS 565 >gi|282854645|ref|ZP_06263980.1| proline--tRNA ligase [Propionibacterium acnes J139] gi|282582227|gb|EFB87609.1| proline--tRNA ligase [Propionibacterium acnes J139] Length = 585 Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 100/217 (46%), Positives = 141/217 (64%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 4 RMSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 64 ANIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y Sbjct: 124 YSSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 +RIF+RLG ++A SGP+GG S EF+ +A GE Sbjct: 184 IRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGE 220 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 422 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 481 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 482 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 540 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + + D VE++ R TG +S+ E + Sbjct: 541 GMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 576 >gi|332296932|ref|YP_004438854.1| Prolyl-tRNA synthetase [Treponema brennaborense DSM 12168] gi|332180035|gb|AEE15723.1| Prolyl-tRNA synthetase [Treponema brennaborense DSM 12168] Length = 615 Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 102/226 (45%), Positives = 145/226 (64%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ + L+E P +A IASH+LMLR G+I + G++++LP G ++ V IIREE Sbjct: 1 MKTSETLISTLREVPAEAVIASHQLMLRAGLIRKLGNGLFTYLPFGLRSFRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ + +LW ESGR+D+ G MLR+ +R D+ ++ PT EE +T + R Sbjct: 61 MDAIGALEIKPSVVVPGELWRESGRWDTMGAGMLRIKNRVDQELVVSPTAEEAVTALIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI K+RDE+RPR+GVMR REF+MKDAYSF E +Y M + Sbjct: 121 ELSSYKQLPIVAYQINTKYRDEIRPRYGVMRGREFMMKDAYSFHADAESLDKTYLAMEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFCSK 225 Y RIF RLGL IP+ A+SG +GG S EF+V + G +T + C K Sbjct: 181 YKRIFKRLGLSVIPVSADSGAMGGSGSEEFMVESPIGDDTLILCPK 226 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 90/144 (62%), Gaps = 3/144 (2%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 S +G E+GHIF G KY+ M+ T+ +GK MG YGIG R +A++IE HDG G Sbjct: 445 SKKGNELGHIFKLGYKYTKSMNVTYLDENGKQQVPTMGCYGIGVDRSLASIIEEHHDGNG 504 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I+WP S AP+++ ++ +K ++ ++ + +YA L + G +V DD E+ G +F DL Sbjct: 505 IVWPMSAAPYQVVIVPVK-YEGTMKEIADSLYAELRQAGIEVLLDDRNERPGVKFKDMDL 563 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 +G P++++VG K + + VE+K R Sbjct: 564 IGIPVRIVVGEKNLPN--VELKLR 585 >gi|302522218|ref|ZP_07274560.1| prolyl-tRNA synthetase [Streptomyces sp. SPB78] gi|302431113|gb|EFL02929.1| prolyl-tRNA synthetase [Streptomyces sp. SPB78] Length = 563 Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 112/281 (39%), Positives = 155/281 (55%), Gaps = 29/281 (10%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + + + GI+SWLPLG+K LDN++ I+REE Sbjct: 6 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRTAAGIWSWLPLGKKVLDNISQIVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGAQEVLLPALLPREPYEASGRWEEYGDLLFRLKDRKGADYLLGPTHEEIFTQVVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ+Q K+RDE RPR GV+R REF+MKD+YSFD T EG SY +Y Sbjct: 126 CTSYKDLPVMLYQVQTKYRDEARPRSGVLRGREFVMKDSYSFDTTDEGLAESYALHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI--------- 232 +IF RLGL + A SG +GG S EF+ A GE F D P Sbjct: 186 RKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDT------FADCPNCGFAANTEA 239 Query: 233 --------------PSENTDFDDIISLNSIVEQWTAPYAAT 259 P E D D ++ S+ E P +AT Sbjct: 240 VTFKGAAVDGSAHGPVEELDTPDTPTIESLAEHLGVPASAT 280 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 87/157 (55%), Gaps = 4/157 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G +GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 405 RAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLC 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP V+P + + + A + + +I +L+ G V DD G G +F A+L+ Sbjct: 465 WPAEVSPADVHV--VAAGKVLQTELALEIADKLAAAGARVLVDDRAGVSPGVKFTDAELI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P VI G + ++ VE+K R TG RE++S+EE + Sbjct: 523 GVPKTVIAGRRS-AEGIVELKDRRTGEREELSVEEAV 558 >gi|149193855|ref|ZP_01870953.1| prolyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] gi|149135808|gb|EDM24286.1| prolyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] Length = 574 Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 105/226 (46%), Positives = 145/226 (64%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F L+E P+DA SH ++R G I Q + GIY + PLG+ LDN+ II++E Sbjct: 1 MRFSRLFCYTLKEAPKDAVTPSHIYLIRGGYIKQVAAGIYDFAPLGKIVLDNIRDIIKKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +GA E+ + + +LW E+GR YG E+LR+ DR + PT+EE + D+ RS Sbjct: 61 MDNSGAQEVMLSFITPYELWEETGRAKKYGDELLRIEDRKGNKFVLSPTNEESIVDLVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP YQI LKFRDE RPRFG++R REF+MKDAYSF E +N M + Sbjct: 121 YVKSYKQLPINLYQINLKFRDEARPRFGLLRGREFIMKDAYSFHKDEEDLDREFNLMEET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK 225 Y +IF ++GL + A+SG IGG S EF+VLA+TGE V CS+ Sbjct: 181 YKKIFSKMGLDFRVVEADSGAIGGSGSKEFMVLANTGEDDIVVCSE 226 Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 69/169 (40%), Positives = 97/169 (57%), Gaps = 5/169 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVGHIF G YS PM+ATF +GK MG YGIG R++AA IE +HD KGI Sbjct: 409 TKGIEVGHIFKLGDVYSKPMNATFLDENGKAKPFIMGCYGIGVSRLIAAAIEQNHDDKGI 468 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP +APF + +I ++K +QV E +Y +L V DD E+ G + + Sbjct: 469 IWPKEIAPFVVDIIIGDVKKENQV--KFAENLYEKLKSENIKVLLDDRKERFGVKINDFE 526 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 LLGFP VIVG K + D VEI+ R + + ++ +EV ++ + + Sbjct: 527 LLGFPYAVIVGKK-LKDGIVEIRDRRSDEKIEVKSDEVFDFLKEKLKKD 574 >gi|50842977|ref|YP_056204.1| prolyl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|289428734|ref|ZP_06430417.1| proline--tRNA ligase [Propionibacterium acnes J165] gi|295131048|ref|YP_003581711.1| proline--tRNA ligase [Propionibacterium acnes SK137] gi|81826419|sp|Q6A7L9|SYP_PROAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|50840579|gb|AAT83246.1| prolyl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|289158132|gb|EFD06352.1| proline--tRNA ligase [Propionibacterium acnes J165] gi|291375052|gb|ADD98906.1| proline--tRNA ligase [Propionibacterium acnes SK137] gi|332675928|gb|AEE72744.1| proline--tRNA ligase [Propionibacterium acnes 266] Length = 585 Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 100/217 (46%), Positives = 141/217 (64%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 4 RMSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 64 ASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y Sbjct: 124 YSSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 +RIF+RLG ++A SGP+GG S EF+ +A GE Sbjct: 184 IRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGE 220 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 422 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 481 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 482 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 540 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + + D VE++ R TG +S+ E + Sbjct: 541 GMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 576 >gi|227514714|ref|ZP_03944763.1| proline--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227086918|gb|EEI22230.1| proline--tRNA ligase [Lactobacillus fermentum ATCC 14931] Length = 581 Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 140/218 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P +E P DAE+ SHK+M+R G I+Q S G++++LPL + + + IIREE Sbjct: 9 MKQSQMLIPTQKEAPADAEVLSHKMMVRAGYIYQVSAGVWAYLPLAYRVIRKIEQIIREE 68 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM +P L ADLW ESGRY++YG + +L DR ++ I GPTHEE +T I R Sbjct: 69 MDKAGAVEMLLPGLLPADLWKESGRYEAYGDNLFKLKDRRERDFILGPTHEETVTSILRD 128 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q K+RDE RPR+G++R +EF M D YSF G +Y+ + Sbjct: 129 AIHSYKKLPLVVYQLQDKYRDEDRPRYGILRGKEFEMLDGYSFSADQAGLDQAYDLQAKA 188 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y IF R+GL + A+SG +GG S EF A GE Sbjct: 189 YRNIFDRIGLDYKVILADSGTMGGKNSQEFSAPAAIGE 226 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/156 (43%), Positives = 94/156 (60%), Gaps = 5/156 (3%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIE+GHIF GT YS AT +G+D + MG YGIG R+++A+ E + D G++W Sbjct: 416 GIEIGHIFKLGTHYSEVFGATVLDQNGRDVPMIMGCYGIGVSRLLSAISEQNADENGLVW 475 Query: 341 PDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 P +VAPF I +I N K DQ+ E+I A L + G +V DD E+ G +FA ADL+ Sbjct: 476 PQAVAPFDIHVIPVNAKKEDQMA--MAEEITANLEEAGYEVLVDDRKERAGVKFADADLI 533 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P++V VG K + VEIK R TG ++ EE+ Sbjct: 534 GVPIRVTVGKK-AGEGIVEIKIRKTGETLEVHKEEL 568 >gi|289426352|ref|ZP_06428095.1| proline--tRNA ligase [Propionibacterium acnes SK187] gi|289153080|gb|EFD01798.1| proline--tRNA ligase [Propionibacterium acnes SK187] Length = 585 Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 100/217 (46%), Positives = 141/217 (64%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 4 RMSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 64 ASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y Sbjct: 124 YSSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 +RIF+RLG ++A SGP+GG S EF+ +A GE Sbjct: 184 IRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGE 220 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 422 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 481 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 482 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 540 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + + D VE++ R TG +S+ E + Sbjct: 541 GMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 576 >gi|270292053|ref|ZP_06198268.1| proline--tRNA ligase [Streptococcus sp. M143] gi|270279581|gb|EFA25423.1| proline--tRNA ligase [Streptococcus sp. M143] Length = 617 Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDLTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 92/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ G+ +P +APF + LI + D+ + EK+ A L + G +V DD Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDEEAQALTEKLEANLMEAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|306828825|ref|ZP_07462017.1| proline--tRNA ligase [Streptococcus mitis ATCC 6249] gi|304429003|gb|EFM32091.1| proline--tRNA ligase [Streptococcus mitis ATCC 6249] Length = 617 Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ G+ +P +APF + LI + A D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNAKDEEAQALTEKLEANLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|290957026|ref|YP_003488208.1| prolyl tRNA synthetase [Streptomyces scabiei 87.22] gi|260646552|emb|CBG69649.1| prolyl tRNA synthetase [Streptomyces scabiei 87.22] Length = 567 Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 104/239 (43%), Positives = 143/239 (59%), Gaps = 1/239 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + G+++WLPLG+K L NV I+REE Sbjct: 8 RMSQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGVWTWLPLGKKVLANVERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR+D YG E+ RL DR + GPTHEE+ T I + Sbjct: 68 DAIGAQEVLLPALLPKEPYEATGRWDEYGPELFRLKDRKGGDYLLGPTHEEIFTLIVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ KFRDE RPR G++R REFLMKD+YSFD EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQTKFRDEARPRAGILRGREFLMKDSYSFDTEDEGLAQSYALHRAAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++F RLGL A +G +GG S EF+ A GE F DF +E F+ Sbjct: 188 QKVFERLGLDYRICAATAGAMGGSKSEEFLAPAGAGE-DTFADCPACDFAANTEAITFE 245 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 89/159 (55%), Gaps = 8/159 (5%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ + G GK V MGSYGIG R VAA+ E S D KG+ Sbjct: 409 RAIEIGHIFQLGRKYADALKLDVLGQHGKPVRVTMGSYGIGVSRAVAALAEQSADDKGLC 468 Query: 340 WPDSVAPFKISLINI-KA-HDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVAD 396 WP VAP + ++ KA ++ D EK+ A G V DD G G +F ++ Sbjct: 469 WPAEVAPADVHVVAAGKALQTELALDVSEKLRA----AGLRVLVDDRAGVSPGVKFTDSE 524 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G P +++V + ++ +E+K R TG RE+++++E I Sbjct: 525 LIGVP-KILVAGRRSAEGVLELKDRRTGEREELTVDEAI 562 >gi|86608604|ref|YP_477366.1| prolyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] gi|114152268|sp|Q2JMD8|SYP_SYNJB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|86557146|gb|ABD02103.1| prolyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 609 Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 108/230 (46%), Positives = 146/230 (63%), Gaps = 5/230 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+E+P +AE+ SHKL+LR I + S GIY++LPL + L ++ I+R+E Sbjct: 6 RLSQMLFVTLREDPVEAELPSHKLLLRGCFIRRLSPGIYTYLPLLWRVLQKISEIVRQEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDIF 118 N G E +P LQ A++W ESGR+D Y + M L DR + GPTHEEV+T + Sbjct: 66 NAIGGQECLLPQLQPAEIWRESGRWDVYTQAEGIMFALKDRQGREQSLGPTHEEVITLLA 125 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 R I+SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y M+ Sbjct: 126 RDLIRSYRQLPQTLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHANEESLRQTYQDMY 185 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGD--LSHEFIVLADTGETQVFCSKD 226 +Y RI R GL+ + A++G IGG S EF+VLA GE ++ + D Sbjct: 186 RAYSRILRRCGLEFRVVDADAGAIGGPSAASQEFMVLASAGEDEILYTPD 235 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P DV + D P+ +ARGIE+GHIF G K+SLPM ATF G + Sbjct: 412 PLPEVVDVRKAQAGDRCLLNPDQILETARGIEIGHIFQLGLKFSLPMRATFTDEQGSEQP 471 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + MG YGIG R+ A +E SHD GIIWP ++AP+ + ++ D EK+ Sbjct: 472 LWMGCYGIGVSRLAQAAVEQSHDANGIIWPVAIAPYHVVVVVPNISDPEQMSVAEKLVQD 531 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G + WDD E+ G +F ADL+G P ++ G + + KVE+ R +G ++ + Sbjct: 532 LATAGIETLWDDRDERAGVKFKDADLIGIPYRITTG-RSLKQGKVELTERASGQATEIPI 590 Query: 432 EEVINYASHRF 442 EEV+ R Sbjct: 591 EEVVTTLKERI 601 >gi|331267089|ref|YP_004326719.1| prolyl-tRNA synthetase [Streptococcus oralis Uo5] gi|326683761|emb|CBZ01379.1| prolyl-tRNA synthetase [Streptococcus oralis Uo5] Length = 617 Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ G+ +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|293364306|ref|ZP_06611032.1| proline--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307702728|ref|ZP_07639680.1| prolyl-tRNA synthetase [Streptococcus oralis ATCC 35037] gi|291317152|gb|EFE57579.1| proline--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307623844|gb|EFO02829.1| prolyl-tRNA synthetase [Streptococcus oralis ATCC 35037] Length = 617 Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ G+ +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDEEAQTLTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+IG +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERIGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|239928618|ref|ZP_04685571.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291436943|ref|ZP_06576333.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291339838|gb|EFE66794.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 567 Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 106/238 (44%), Positives = 144/238 (60%), Gaps = 10/238 (4%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + GI++WLPLG+K L NV I+REE Sbjct: 8 RMSQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGIWTWLPLGKKVLANVERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR+D YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVLLPALLPREPYEATGRWDEYGPELFRLQDRKGGDYLLGPTHEEIFTLLVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ KFRDE RPR G++R REFLMKD+YSFDL EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQTKFRDEARPRAGILRGREFLMKDSYSFDLEDEGLARSYALHRQAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++F RLGL A +G +GG S EF+ A+ GE F D P N DF Sbjct: 188 QKVFERLGLDYRICAATAGAMGGSKSEEFLAPAEAGEDT------FADCP----NCDF 235 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 90/159 (56%), Gaps = 8/159 (5%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ + G +GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 408 RAIEIGHIFQLGRKYTDALKLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLC 467 Query: 340 WPDSVAPFKISLINI-KA-HDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 WP VAP + ++ KA ++ D EK L+ G V DD G G +F ++ Sbjct: 468 WPQEVAPADVHVVAAGKALQTELALDVSEK----LAAAGVRVLVDDRPGVSPGVKFTDSE 523 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G P +++V + ++ VE+K R TG RE++++EE I Sbjct: 524 LIGVP-RILVAGRRAAEGVVELKDRRTGEREELTVEEAI 561 >gi|309799607|ref|ZP_07693832.1| prolyl-tRNA synthetase [Streptococcus infantis SK1302] gi|308116758|gb|EFO54209.1| prolyl-tRNA synthetase [Streptococcus infantis SK1302] Length = 617 Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 98/214 (45%), Positives = 139/214 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKMGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAIT 214 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 19/188 (10%) Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 +TA Y +V ++ P+ K V ARGIE+GHIF GT+YS M A +G+ Sbjct: 414 FTAEYVDIREVREGEIS---PDGKGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRA 470 Query: 310 HYVQMGSYGIGAMRVVAAVIES--------SHDGK-----GIIWPDSVAPFKISLINIKA 356 + MG YGIG R+++AV+E + G+ GI +P +APF + LI + Sbjct: 471 VPIIMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNV 530 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D+ +I L G +V DD E++G +F+ +DL+G P+++ VG K +D V Sbjct: 531 KDEASLTLTNRIEEALVNKGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIV 589 Query: 417 EIKHRLTG 424 E+K + TG Sbjct: 590 EVKIKATG 597 >gi|319945653|ref|ZP_08019905.1| proline--tRNA ligase [Streptococcus australis ATCC 700641] gi|319748252|gb|EFW00494.1| proline--tRNA ligase [Streptococcus australis ATCC 700641] Length = 616 Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + KI +L K G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEASLELTSKIEDQLVKAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P+++ VG K +D VE+K + +G Sbjct: 560 ERAGVKFSDSDLIGLPIRITVGKK-AADGVVEVKIKASG 597 >gi|322374996|ref|ZP_08049510.1| proline--tRNA ligase [Streptococcus sp. C300] gi|321280496|gb|EFX57535.1| proline--tRNA ligase [Streptococcus sp. C300] Length = 617 Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ G+ +P +APF + LI + D+ + +K+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDEEAQALTDKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|320535781|ref|ZP_08035862.1| prolyl-tRNA synthetase [Treponema phagedenis F0421] gi|320147329|gb|EFW38864.1| prolyl-tRNA synthetase [Treponema phagedenis F0421] Length = 576 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 99/226 (43%), Positives = 145/226 (64%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P +A IASH+L+LR GMI + G++++LPLG ++ + IIREE Sbjct: 1 MKMSQMFMPTLREVPSEAVIASHQLLLRAGMIRKIGNGLFAYLPLGLRSFHKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G +E + +LW ESGR+D+ G E+LR+ +R ++ ++ PT EE T + R Sbjct: 61 LDAIGCLECKPSVVIPGELWQESGRWDAMGDELLRMKNRLNQDLVVSPTAEEAFTALLRF 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ P T YQI K+RDE+RPR+G+MR+REF M DAYSF T E Y + Sbjct: 121 ELSSYKQFPLTLYQINTKYRDEIRPRYGLMRAREFTMMDAYSFHTTQESLDEVYEHFSQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFCSK 225 Y +IF R GL IP+RA+SG +GG S EF+V ++ G +T + C K Sbjct: 181 YRKIFARCGLSVIPVRADSGAMGGSGSEEFMVESEVGDDTLILCPK 226 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/160 (37%), Positives = 94/160 (58%), Gaps = 3/160 (1%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 S +G E+GHIF G KY+ M+ TF +GK Y MG YGIG R +A+VIE HD G Sbjct: 408 SKKGNELGHIFKLGFKYTKSMNMTFLDENGKQQYPTMGCYGIGVDRTLASVIEEHHDEDG 467 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I+WP +VAP+ ++ IK ++ ++A + +Y L G +V DD E+ G +F DL Sbjct: 468 IVWPLTVAPYHAVIVPIKYEGKM-KEAADALYTELQTAGVEVLLDDRHERPGVKFKDMDL 526 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +G P++++VG K + ++E K R + ++ +EV + Sbjct: 527 IGIPIRLVVGEKNL--PQIECKLRTEKESKLIAQKEVCAF 564 >gi|307331523|ref|ZP_07610636.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] gi|306882840|gb|EFN13913.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] Length = 573 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 109/238 (45%), Positives = 144/238 (60%), Gaps = 10/238 (4%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S L L+E+P DAE ASHKL++R G + + + GI++WLP+G+K L+NV I+REE Sbjct: 9 RLSTTMLKTLREDPADAETASHKLLVRAGYVRRAAAGIWTWLPIGKKVLENVARIVREEM 68 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR+D YG + R+ DR + GPTHEE+ T + Sbjct: 69 DAIGAQEVLLPALLPREPYEVSGRWDEYGDLLFRIKDRKGADYLLGPTHEEIFTLTVKDQ 128 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REFLMKD+YSFD T EG SY +Y Sbjct: 129 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFLMKDSYSFDTTDEGLAESYRLHREAY 188 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 RIF RLGL + A SG +GG S EF+ A GE F+D P N D+ Sbjct: 189 QRIFQRLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDT------FVDCP----NCDY 236 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/158 (37%), Positives = 85/158 (53%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G +GK V MGSYG+G R VAA+ E +HD G+ Sbjct: 411 RAIEIGHIFQLGRKYADAFQLDVLGQNGKPARVTMGSYGVGVSRAVAALAEQTHDESGLC 470 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP VAP + + + A + + I +L G V DD G G +F A+L+ Sbjct: 471 WPREVAPADVHI--VAAGKALQTELALDIAEKLGTAGVRVMVDDRAGVSPGVKFTDAELI 528 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P ++VG + D VE+K R TG RE++ ++E I+ Sbjct: 529 GVPTILVVG-RGAKDGVVELKDRRTGEREELPIDEAIS 565 >gi|322388633|ref|ZP_08062233.1| proline--tRNA ligase [Streptococcus infantis ATCC 700779] gi|321140553|gb|EFX36058.1| proline--tRNA ligase [Streptococcus infantis ATCC 700779] Length = 617 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKMGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 89/159 (55%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEASLALTDRIEEALVNKGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|300783993|ref|YP_003764284.1| prolyl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|299793507|gb|ADJ43882.1| prolyl-tRNA synthetase [Amycolatopsis mediterranei U32] Length = 582 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 99/217 (45%), Positives = 139/217 (64%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SH+L++R G + + + G YSWLPLG + L + A++REE Sbjct: 4 RTSSLFLRTLREDPADAEVPSHRLLVRAGYVRRVAPGGYSWLPLGLRVLRRIEAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + +GR+ YG + RL DR + GPTHEE+ + Sbjct: 64 NAMGAQEIQFPALLPREPYETTGRWTEYGDGLFRLKDRKGADYLLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+ P T YQIQ K+RDE RPR G++R REF+MKD+YSFDL EG SY +Y Sbjct: 124 YSSYRDYPVTLYQIQTKYRDEARPRAGILRGREFVMKDSYSFDLDDEGLARSYQAHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 +++F RLGL+ + ++A SG +GG S EF+ +A+TGE Sbjct: 184 VKLFDRLGLEYVVVKATSGAMGGSASEEFLAVAETGE 220 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 94/161 (58%), Gaps = 2/161 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V+ARGIE+GHIF G KY+ G D K + MGSYG+G R+V + E +HD Sbjct: 417 VAARGIEIGHIFQLGRKYTDAFEVDALGPDSKPIRITMGSYGVGVSRLVGVLAEQNHDDL 476 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+IWP +PF + ++ I D+ EKI A L G +V DD G +FA A+ Sbjct: 477 GLIWPRVASPFDVHIV-IAGKDETIAAGAEKIAAELDAAGVEVILDDRKATPGVKFADAE 535 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 L+G P ++VG + +++ VE+K R +G RE++++E V+ + Sbjct: 536 LVGVPTILVVG-RGLANGVVEVKDRRSGEREEIAVEAVVEH 575 >gi|315612430|ref|ZP_07887343.1| proline--tRNA ligase [Streptococcus sanguinis ATCC 49296] gi|315315411|gb|EFU63450.1| proline--tRNA ligase [Streptococcus sanguinis ATCC 49296] Length = 617 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ G+ +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|327446413|gb|EGE93067.1| prolyl-tRNA synthetase [Propionibacterium acnes HL013PA2] Length = 581 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 141/215 (65%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 2 SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMAS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 62 IGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+R Sbjct: 122 SYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RLG ++A SGP+GG S EF+ +A +GE Sbjct: 182 IFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAASGE 216 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 418 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 478 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + + D VE++ R TG +S+ E + Sbjct: 537 GMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 >gi|68536224|ref|YP_250929.1| prolyl-tRNA synthetase [Corynebacterium jeikeium K411] gi|260578924|ref|ZP_05846827.1| proline--tRNA ligase [Corynebacterium jeikeium ATCC 43734] gi|114152185|sp|Q4JV46|SYP_CORJK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|68263823|emb|CAI37311.1| proS [Corynebacterium jeikeium K411] gi|258602898|gb|EEW16172.1| proline--tRNA ligase [Corynebacterium jeikeium ATCC 43734] Length = 596 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 99/217 (45%), Positives = 140/217 (64%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I + + G+YSWLPLG + L N+ A++REE Sbjct: 4 RMSQLFLRTLRDDPADAEVPSHKLLVRAGYIRRVAPGVYSWLPLGLRVLRNIEAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+S P L + + +GR+ YG + RL DR + + GPTHEE+ T + +S Sbjct: 64 NAIGAQEISFPALLPREPYDTTGRWVEYGDALFRLKDRKNADYLLGPTHEEMFTSVVKSE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQ+Q K+RDE RPR G++R REF+MKD+YSF++ EG + SY +Y Sbjct: 124 YNSYKDFPVILYQVQTKYRDEERPRAGILRGREFIMKDSYSFNMDDEGLEESYQLHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RLG+K A SG +GG S EF+ +A GE Sbjct: 184 QNIFDRLGIKYAICSATSGAMGGSASEEFLAVAANGE 220 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/147 (40%), Positives = 83/147 (56%), Gaps = 3/147 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ GK MGSYG+G R+V + E D G+ Sbjct: 428 ARGIEIGHIFQLGRKYTEAFDVKILDESGKRSVPTMGSYGVGVSRLVGVIAEQMLDDSGL 487 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP SVAPF + ++ I D +A ++ LS G +V +DD + G +F ++L Sbjct: 488 RWPASVAPFDVHVV-IANKDAAAGEAAVELVETLSNDGLEVLFDDRPKVSPGVKFKDSEL 546 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTG 424 LG PL V+VG F +D KVE+++RLTG Sbjct: 547 LGMPLVVVVGRGF-ADGKVELRNRLTG 572 >gi|306825925|ref|ZP_07459263.1| proline--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431857|gb|EFM34835.1| proline--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 617 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYNSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ G+ +P +APF + LI + D+ + EK+ A L + G +V DD Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMEAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|170016989|ref|YP_001727908.1| prolyl-tRNA synthetase [Leuconostoc citreum KM20] gi|226701307|sp|B1MY62|SYP_LEUCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169803846|gb|ACA82464.1| Prolyl-tRNA synthetase [Leuconostoc citreum KM20] Length = 571 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 101/230 (43%), Positives = 142/230 (61%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+L+L+ G I S G +S+LP+ ++ L+ + IIREE Sbjct: 1 MKQSKLLMPTLREVPADAEVKSHQLLLKAGFIRPVSAGTFSYLPMAKRVLNKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A EM VP + A+LW +SGRY +YG + + +R D+ I GPTHEE T + Sbjct: 61 MDRIDANEMLVPEILPAELWQKSGRYTTYGPNLYKFKNRQDRDFILGPTHEETFTQLMAD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG++R+REF+MKDAYSF G ++ M + Sbjct: 121 DIKSYKKLPLVVYQIQPKFRDENRPRFGLLRTREFIMKDAYSFSADQAGLDTAFRNMESA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y +F R+GL + ++G +GG S EF A GE + D D+ Sbjct: 181 YTNVFDRIGLNYRAIVGDAGAMGGSDSKEFSAPAAAGE-DIIAYSDTTDY 229 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 59/153 (38%), Positives = 90/153 (58%), Gaps = 1/153 (0%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V +GIE+GHIF GT+YS M A +G+ + MGSYGIG R+++A++E D Sbjct: 403 VFTKGIEIGHIFKLGTRYSKAMGAQVLDENGRQVDMIMGSYGIGVSRLLSAIVEQKADDD 462 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G++WP SVAPF + ++ + D ++ L+K G +V DD E+ G +FA AD Sbjct: 463 GLVWPASVAPFDVHIVPVNTKDDEQAGVASQLEELLTKQGLEVLIDDRKERAGVKFADAD 522 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L+G P+++ VG K S+ VE+K R + +M Sbjct: 523 LIGLPIRITVGKK-ASEDVVEVKVRASNTNIEM 554 >gi|314923910|gb|EFS87741.1| prolyl-tRNA synthetase [Propionibacterium acnes HL001PA1] gi|314966030|gb|EFT10129.1| prolyl-tRNA synthetase [Propionibacterium acnes HL082PA2] gi|314981915|gb|EFT26008.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA3] gi|315090730|gb|EFT62706.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA4] gi|315094978|gb|EFT66954.1| prolyl-tRNA synthetase [Propionibacterium acnes HL060PA1] gi|315104203|gb|EFT76179.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA2] gi|327328087|gb|EGE69856.1| proline--tRNA ligase [Propionibacterium acnes HL103PA1] Length = 581 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 140/215 (65%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 2 SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMAN 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 62 IGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+R Sbjct: 122 SYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RLG ++A SGP+GG S EF+ +A GE Sbjct: 182 IFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGE 216 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 418 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 478 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + + D VE++ R TG +S+ E + Sbjct: 537 GMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 >gi|295698550|ref|YP_003603205.1| prolyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] gi|291157056|gb|ADD79501.1| prolyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] Length = 583 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 99/210 (47%), Positives = 142/210 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+Y L L + ++EI S +LM+R+GMI + S GIY WLP G K ++ + +IIR+E Sbjct: 1 MKTSQYLLSTLTDYQVNSEILSDRLMMRSGMIRKLSSGIYYWLPTGVKVIEKLKSIIRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G IE S P +Q LW +SGR D YG+E+ R+ DR + I PT+EE + + + Sbjct: 61 MDSIGLIEFSSPLIQPMKLWKKSGRLDQYGEELFRINDRKSRPFILSPTNEESIIYLMKH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP + YQI+ KFRDELRP+FG++RS+EF+MKDAYSF + + +Y M + Sbjct: 121 EIQSYKQLPISLYQIRTKFRDELRPQFGIIRSKEFIMKDAYSFHTNLQSLQKTYEMMLDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 Y RIF+R+GL + AE+G IGG+LSHEF Sbjct: 181 YKRIFNRIGLDFRVILAENGFIGGNLSHEF 210 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 5/167 (2%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IE+GHIF G KYS M+A F+ G+ + MG YGIG RV+AA+IE +HD GI+WP Sbjct: 412 IEIGHIFQIGNKYSRAMNAFFQDERGERKLITMGCYGIGIGRVIAAIIEQNHDINGIVWP 471 Query: 342 DSVAPFKISLINIKAHD-QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD--LL 398 D +APF+++++ I + + R +Y L K +V +DD QIG + D L+ Sbjct: 472 DVLAPFQVAILPINMYKFNIVRKVSNDLYCDLKKNNFEVIFDD--RQIGFSKMLKDIELI 529 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G P +I+ + + + + ++R E + L +++ F N Sbjct: 530 GVPNILIINKENLLSNNIIYRNRSNHSEEMIHLSCTLSFLKKLFIKN 576 >gi|239982632|ref|ZP_04705156.1| prolyl-tRNA synthetase [Streptomyces albus J1074] gi|291454473|ref|ZP_06593863.1| prolyl-tRNA synthetase 1 [Streptomyces albus J1074] gi|291357422|gb|EFE84324.1| prolyl-tRNA synthetase 1 [Streptomyces albus J1074] Length = 564 Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 112/275 (40%), Positives = 156/275 (56%), Gaps = 17/275 (6%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + + + GI+SWLPLG+K LDN++ I+REE Sbjct: 6 RMSRLMVKTLRDDPADAETISHKLLVRAGYVRRTAAGIWSWLPLGKKVLDNISHIVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKDRKGADYLLGPTHEEIFTQVVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG + SY +Y Sbjct: 126 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTTDEGLEESYQLHRAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK----------DFMDF 230 +IF RLGL + A SG +GG S EF+ A GE T C F Sbjct: 186 QKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAPAGEDTFADCPNCSYAANTEAVTFALA 245 Query: 231 PI------PSENTDFDDIISLNSIVEQWTAPYAAT 259 P+ P E D D ++ ++ P +AT Sbjct: 246 PVEGAEHGPVEVLDTPDTPTIETLAAHLGVPASAT 280 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 86/157 (54%), Gaps = 4/157 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G GK V MGSYGIG R VAA+ E + DG+G+ Sbjct: 406 RAIEIGHIFQLGRKYADTFQLDVLGQQGKPVRVTMGSYGIGVSRAVAALAEQTADGQGLC 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP VAP + + + A + + ++ +L+ G V DD G G +F A+L+ Sbjct: 466 WPAEVAPADVHV--VAAGKALQTELALEVSEKLNAAGVRVLVDDRAGVSPGVKFTDAELI 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P +++V + +D VE+K R TG RE++ + E + Sbjct: 524 GVP-KILVAGRRSADGIVELKDRRTGEREELPVAEAV 559 >gi|257867713|ref|ZP_05647366.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257874040|ref|ZP_05653693.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257876619|ref|ZP_05656272.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257801796|gb|EEV30699.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257808204|gb|EEV37026.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257810785|gb|EEV39605.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 569 Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 98/230 (42%), Positives = 148/230 (64%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE SH+L++R G I Q + GIY +LPL Q+ L+ + +IREE Sbjct: 1 MKQSKCLIPTLRETPSDAETLSHQLLVRAGYIRQVAAGIYVYLPLAQRVLEKIKRVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM++P+L + W ESGR YG+ + RL DRN++ ++ GPTHEE T + ++ Sbjct: 61 LAQIDAVEMAMPSLLPYEPWKESGRASLYGESLYRLTDRNEREIVLGPTHEEPFTTLIKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ K+RDE RPRFG++RSREF+M+D YSF +YN+ ++ Sbjct: 121 EITSYKRLPLSLYQIQTKYRDEQRPRFGLIRSREFIMQDGYSFHADEASLDQTYNRYEMA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I R G++ + ++G +GG S EF+ L+ GE ++ C D+ Sbjct: 181 YHAILKRCGIEYRAVVGDNGLMGGRDSKEFLALSGIGE-ELICYSTESDY 229 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 1/167 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIEVGHIF GTKYS AT +G + + MG YG+G R+++ ++E + GI Sbjct: 403 TRGIEVGHIFKLGTKYSEAQEATVVDENGDEQPIIMGCYGLGVSRLLSTIVEQYGNEFGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +APF + +I D E++ +++VG V DD E+ G +FA ADL+ Sbjct: 463 DWPQEIAPFDVHIIQTSIEDSYQNALSEEVEEMMNQVGYQVLVDDRNERAGVKFADADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G P+++ +G K V + VEIK + TG ++ EEV + + +N Sbjct: 523 GCPIRLTIGKKAV-EGIVEIKIKHTGATVEVRKEEVASTLTILLANQ 568 >gi|315180910|gb|ADT87824.1| prolyl-tRNA synthetase [Vibrio furnissii NCTC 11218] Length = 546 Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/201 (49%), Positives = 135/201 (67%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+R+E +R GAIE +P +Q +LW E+GR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQEIDRAGAIETLMPVVQPFELWEETGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 + G E+LR DR+ + + PT EEV+T + R+ + SY+ LP YQIQ KFRDE RP Sbjct: 61 SEKMGPELLRFTDRHVRPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMR+REF M DAYSFDL +G + SY+ M +Y + F R+GL P+ A+SG IGG+ Sbjct: 121 RFGVMRAREFSMMDAYSFDLDKQGLQKSYDAMHAAYCKAFDRMGLDYRPVLADSGAIGGN 180 Query: 206 LSHEFIVLADTGETQVFCSKD 226 S EF VLA++GE + S + Sbjct: 181 GSQEFHVLAESGEDLIVFSTE 201 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ + G DGK+ ++MG YGIG RVVAA IE ++D GII Sbjct: 382 RGIEVGHIFQLGTNYSEKMNCSVLGPDGKNVILEMGCYGIGVSRVVAAAIEQNNDKYGII 441 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A EK+YA LS G DV +DD E+ G F+ +L+ Sbjct: 442 WPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELSAAGIDVLFDDRKERPGVMFSDMELI 501 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R G + +++++++ + + + Sbjct: 502 GVPHTIVIGDRSMDEGNFEYKNRRNGEKTAIAIDQIVEHIKAQLA 546 >gi|313793980|gb|EFS42004.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA1] gi|313801367|gb|EFS42618.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA2] gi|313839912|gb|EFS77626.1| prolyl-tRNA synthetase [Propionibacterium acnes HL086PA1] gi|314963668|gb|EFT07768.1| prolyl-tRNA synthetase [Propionibacterium acnes HL082PA1] gi|315079518|gb|EFT51511.1| prolyl-tRNA synthetase [Propionibacterium acnes HL053PA2] gi|327451998|gb|EGE98652.1| prolyl-tRNA synthetase [Propionibacterium acnes HL092PA1] Length = 581 Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 140/215 (65%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 2 SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMAS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 62 IGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+R Sbjct: 122 SYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RLG ++A SGP+GG S EF+ +A GE Sbjct: 182 IFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGE 216 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 418 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 478 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + + D VE++ R TG +S+ E + Sbjct: 537 GMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 >gi|313813363|gb|EFS51077.1| prolyl-tRNA synthetase [Propionibacterium acnes HL025PA1] Length = 581 Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 140/215 (65%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 2 SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMAS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 62 IGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+R Sbjct: 122 SYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RLG ++A SGP+GG S EF+ +A GE Sbjct: 182 IFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGE 216 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 418 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 478 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + + D VE++ R TG +S+ E + Sbjct: 537 GMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 >gi|221231165|ref|YP_002510317.1| prolyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|225853864|ref|YP_002735376.1| prolyl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|254782918|sp|B8ZKT3|SYP_STRPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782920|sp|C1CC55|SYP_STRZJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|220673625|emb|CAR68112.1| prolyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|225723520|gb|ACO19373.1| prolyl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|332076711|gb|EGI87173.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA17545] Length = 617 Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM PTL SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPTLLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|327334245|gb|EGE75959.1| proline--tRNA ligase [Propionibacterium acnes HL097PA1] Length = 581 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 140/215 (65%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 2 SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMAS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 62 IGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+R Sbjct: 122 SYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RLG ++A SGP+GG S EF+ +A GE Sbjct: 182 IFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGE 216 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 418 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 478 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + + D VE++ R TG +S+ E + Sbjct: 537 GMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 >gi|313763586|gb|EFS34950.1| prolyl-tRNA synthetase [Propionibacterium acnes HL013PA1] gi|313807954|gb|EFS46435.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA2] gi|313822153|gb|EFS59867.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA1] gi|313823613|gb|EFS61327.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA2] gi|313825936|gb|EFS63650.1| prolyl-tRNA synthetase [Propionibacterium acnes HL063PA1] gi|314914740|gb|EFS78571.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA4] gi|314919298|gb|EFS83129.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA1] gi|314920792|gb|EFS84623.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA3] gi|314924644|gb|EFS88475.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA3] gi|314930471|gb|EFS94302.1| prolyl-tRNA synthetase [Propionibacterium acnes HL067PA1] gi|314954371|gb|EFS98777.1| prolyl-tRNA synthetase [Propionibacterium acnes HL027PA1] gi|314957443|gb|EFT01546.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA1] gi|314962089|gb|EFT06190.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA2] gi|314968504|gb|EFT12602.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA1] gi|314978817|gb|EFT22911.1| prolyl-tRNA synthetase [Propionibacterium acnes HL072PA2] gi|314986526|gb|EFT30618.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA2] gi|314990885|gb|EFT34976.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA3] gi|315081252|gb|EFT53228.1| prolyl-tRNA synthetase [Propionibacterium acnes HL078PA1] gi|315083450|gb|EFT55426.1| prolyl-tRNA synthetase [Propionibacterium acnes HL027PA2] gi|315087136|gb|EFT59112.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA3] gi|315089308|gb|EFT61284.1| prolyl-tRNA synthetase [Propionibacterium acnes HL072PA1] gi|315099214|gb|EFT71190.1| prolyl-tRNA synthetase [Propionibacterium acnes HL059PA2] gi|315100435|gb|EFT72411.1| prolyl-tRNA synthetase [Propionibacterium acnes HL046PA1] gi|315106771|gb|EFT78747.1| prolyl-tRNA synthetase [Propionibacterium acnes HL030PA1] gi|315109012|gb|EFT80988.1| prolyl-tRNA synthetase [Propionibacterium acnes HL030PA2] gi|327329728|gb|EGE71484.1| proline--tRNA ligase [Propionibacterium acnes HL096PA3] gi|327454965|gb|EGF01620.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA3] gi|327457749|gb|EGF04404.1| prolyl-tRNA synthetase [Propionibacterium acnes HL083PA2] gi|328752168|gb|EGF65784.1| prolyl-tRNA synthetase [Propionibacterium acnes HL020PA1] gi|328755200|gb|EGF68816.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA1] gi|328758320|gb|EGF71936.1| prolyl-tRNA synthetase [Propionibacterium acnes HL025PA2] Length = 581 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 140/215 (65%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 2 SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMAS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 62 IGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+R Sbjct: 122 SYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RLG ++A SGP+GG S EF+ +A GE Sbjct: 182 IFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGE 216 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 418 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 478 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + + D VE++ R TG +S+ E + Sbjct: 537 GMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 >gi|313773524|gb|EFS39490.1| prolyl-tRNA synthetase [Propionibacterium acnes HL074PA1] gi|313831317|gb|EFS69031.1| prolyl-tRNA synthetase [Propionibacterium acnes HL007PA1] gi|313834927|gb|EFS72641.1| prolyl-tRNA synthetase [Propionibacterium acnes HL056PA1] gi|314974192|gb|EFT18288.1| prolyl-tRNA synthetase [Propionibacterium acnes HL053PA1] gi|314976699|gb|EFT20794.1| prolyl-tRNA synthetase [Propionibacterium acnes HL045PA1] gi|314984337|gb|EFT28429.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA1] gi|315095331|gb|EFT67307.1| prolyl-tRNA synthetase [Propionibacterium acnes HL038PA1] gi|327328406|gb|EGE70168.1| proline--tRNA ligase [Propionibacterium acnes HL096PA2] gi|327444193|gb|EGE90847.1| prolyl-tRNA synthetase [Propionibacterium acnes HL043PA2] gi|327444928|gb|EGE91582.1| prolyl-tRNA synthetase [Propionibacterium acnes HL043PA1] gi|328760064|gb|EGF73644.1| proline--tRNA ligase [Propionibacterium acnes HL099PA1] Length = 581 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 140/215 (65%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 2 SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMAS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 62 IGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+R Sbjct: 122 SYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RLG ++A SGP+GG S EF+ +A GE Sbjct: 182 IFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGE 216 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 418 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 478 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + D VE++ R TG +S+ E + Sbjct: 537 GMPTSVVVGRRL-KDGLVEVRDRSTGENRQVSVAEAV 572 >gi|21224048|ref|NP_629827.1| prolyl-tRNA synthetase [Streptomyces coelicolor A3(2)] gi|256784874|ref|ZP_05523305.1| prolyl-tRNA synthetase [Streptomyces lividans TK24] gi|289768768|ref|ZP_06528146.1| prolyl-tRNA synthetase [Streptomyces lividans TK24] gi|15214317|sp|Q9KYR6|SYP_STRCO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|7801271|emb|CAB91135.1| prolyl tRNA synthetase [Streptomyces coelicolor A3(2)] gi|289698967|gb|EFD66396.1| prolyl-tRNA synthetase [Streptomyces lividans TK24] Length = 567 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 103/238 (43%), Positives = 144/238 (60%), Gaps = 1/238 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK L+++P DAE+ SHKL++R G + + + G++SWLPLG+K L N+ I+REE Sbjct: 8 RMSKLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGLWSWLPLGKKVLGNIERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR+ YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVQLPALLPREPYEATGRWQEYGPELFRLQDRKGGDYLLGPTHEEIFTLLVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REFLMKD+YSFD+ EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQNKYRDEARPRAGILRGREFLMKDSYSFDVADEGLAESYALHRAAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 RIF RLGL + A +G +GG S EF+ A+ GE F D+ +E F Sbjct: 188 QRIFERLGLDYRIVAATAGAMGGSKSEEFLAPAEAGE-DTFADCPNCDYAANTEAITF 244 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ + G +GK V MGSYGIG R VAA+ E D KG++ Sbjct: 409 RAIEIGHIFQLGRKYADALKLDVLGQNGKPARVTMGSYGIGVSRAVAALAEQHADDKGLV 468 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 W VAP + + + A + + ++ +L+ G V DD G G +F A+L+ Sbjct: 469 WSKEVAPADVHV--VAAGKALQTELALEVSDKLAAAGVRVLVDDRAGVSPGVKFTDAELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P Q++V + + VE+K R TG RE++++EE + Sbjct: 527 GVP-QILVAGRRSGEGVVELKDRRTGEREEVTVEEALT 563 >gi|213964749|ref|ZP_03392949.1| prolyl-tRNA synthetase [Corynebacterium amycolatum SK46] gi|213952942|gb|EEB64324.1| prolyl-tRNA synthetase [Corynebacterium amycolatum SK46] Length = 590 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 101/225 (44%), Positives = 141/225 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G I + + G+YSWLPLG K L NV ++REE Sbjct: 4 RMSQLFLRTLREDPADAEVPSHKLLVRAGYIRRTAPGVYSWLPLGLKVLRNVEKVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E++ P L + + + R+ YG E+ RL DR + GPTHEE+ + Sbjct: 64 EGIGAQELAFPALLPREPYEATNRWTEYGPELFRLKDRKGADYLLGPTHEEMFALAVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T +QIQ K+RDE RPR G++R REF+MKD+YSFD+ EG ++SY + +Y Sbjct: 124 FSSYKDFPTTLFQIQTKYRDEARPRAGILRGREFVMKDSYSFDMDDEGLENSYQQHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 RIF RLG+K A SG +GG S EF+ +++ GE S D Sbjct: 184 QRIFDRLGIKYEICHATSGAMGGSASEEFLAVSENGEDSFVVSTD 228 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 3/166 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ +GK MGSYGIG R+VA + E D KG+ Sbjct: 426 RGIEIGHIFQLGRKYTNAFEIDILDVNGKRARPTMGSYGIGVSRLVAVLAEQQLDEKGLK 485 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP + AP+K+ I + + +A E++ LS+ G +V +DD + G +F A+LL Sbjct: 486 WPVAAAPYKVH-IAVAGKNAEAAEAAEQLAEDLSQQGIEVLFDDRPKVSPGVKFKDAELL 544 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G P VI G + +D KVE+++RLT ++++ + + + + S Sbjct: 545 GMPFVVIFGRGY-ADGKVELRNRLTNETDEVAADGIAAHVAELVSK 589 >gi|313811577|gb|EFS49291.1| prolyl-tRNA synthetase [Propionibacterium acnes HL083PA1] Length = 581 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 140/215 (65%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 2 SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMAS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 62 IGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+R Sbjct: 122 SYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RLG ++A SGP+GG S EF+ +A GE Sbjct: 182 IFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGE 216 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 418 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 478 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + D VE++ R TG +S+ E + Sbjct: 537 GMPTSVVVGRRL-KDGLVEVRDRSTGENRQVSVAEAV 572 >gi|322390835|ref|ZP_08064345.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 903] gi|321142505|gb|EFX37973.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 903] Length = 616 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKGIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREGSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R G+ + + G +GG S EF+ + Sbjct: 181 YERIFTRSGIDYKAIIGDGGAMGGKDSQEFMAV 213 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 19/188 (10%) Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 +TA Y +V ++ P+ K V ARGIE+GHIF GT+YS M A +G+ Sbjct: 414 FTAEYVDIREVREGEIS---PDGKGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRA 470 Query: 310 HYVQMGSYGIGAMRVVAAVIES--------SHDGK-----GIIWPDSVAPFKISLINIKA 356 + MG YGIG R+++AV+E + G+ GI +P +APF + LI + Sbjct: 471 VPIIMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNV 530 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D+ ++I L G +V DD E+ G +F+ +DL+G P++V VG K ++ V Sbjct: 531 KDEASLALTDRIEEALVNKGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIV 589 Query: 417 EIKHRLTG 424 E+K + TG Sbjct: 590 EVKIKATG 597 >gi|302537254|ref|ZP_07289596.1| prolyl-tRNA synthetase [Streptomyces sp. C] gi|302446149|gb|EFL17965.1| prolyl-tRNA synthetase [Streptomyces sp. C] Length = 570 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 105/238 (44%), Positives = 144/238 (60%), Gaps = 1/238 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+E+P DAE SH+L++R G + + S G+++WLPLG+K LDNV+ I+REE Sbjct: 13 RMSRLMAKTLREDPADAETLSHRLLVRAGYVRRSSAGVWTWLPLGKKVLDNVSRIVREEM 72 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR+ YG + RL DR + GPTHEE+ T + + Sbjct: 73 DAIGAQEVLLPALLPKEPYEVSGRWSEYGDLLFRLKDRKGADYLLGPTHEEIFTLVVKDQ 132 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD++ EG SY +Y Sbjct: 133 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDVSDEGLAESYRLHREAY 192 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +RIF RLGL + A SG +GG S EF+ A GE F D+ +E F Sbjct: 193 VRIFERLGLDHRIVSAVSGAMGGSASEEFLAPAGAGE-DTFADCPSCDYAANTEAVTF 249 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 4/157 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G +GK V MGSYGIG R VAA+ E + D +G+ Sbjct: 413 RAIEIGHIFQLGRKYADAFGLDVLGKEGKPVRVTMGSYGIGVSRAVAALAEQTADERGLR 472 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLL 398 WP +VAP + + + A V E+ A L+ G V DD G G + A+L+ Sbjct: 473 WPAAVAPADVHV--VAAGKAVPLALAEEAAAALAAAGRRVLLDDRPGLSPGVKLTDAELI 530 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++V + ++ VE++ R G RE++ L E + Sbjct: 531 GVPW-ILVAGRRSAEGVVELQDRAAGTREELPLTEAL 566 >gi|257068210|ref|YP_003154465.1| prolyl-tRNA synthetase [Brachybacterium faecium DSM 4810] gi|256559028|gb|ACU84875.1| prolyl-tRNA synthetase, family II [Brachybacterium faecium DSM 4810] Length = 594 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 140/224 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S F+ L+E+P DAE+ASHKL++R G I + + G+Y+WLPLG K L V I+REE Sbjct: 2 IRLSSSFIRTLREDPADAEVASHKLLVRAGYIRRSAAGVYTWLPLGLKVLRKVEQIVREE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ G E+ LQ + + +GR++ YG + RL DR + PTHEE+ T + Sbjct: 62 QDAIGGQEVLFSALQPREPYEATGRWEDYGPNLFRLQDRKQDDYLLAPTHEEMFTLTVKD 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP YQIQ K+RDE RPR G++R+REFLMKDAYSFD+ EG SY K ++ Sbjct: 122 LFSSYKDLPTMLYQIQAKYRDEARPRAGLLRTREFLMKDAYSFDVDDEGLDASYEKQRLA 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y R F RLGL ++ RA++G +GG S EF+ GE S Sbjct: 182 YQRTFERLGLPTVICRADAGAMGGSRSEEFLHPTPVGEDTFVVS 225 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 3/158 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+GHIF G Y+ + +GK V MGSYGIG R +AAV E HD KG+ Sbjct: 430 RGMEMGHIFQLGRTYAEALGLKVLDENGKSVVVTMGSYGIGVTRAIAAVAELCHDEKGLC 489 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP + ++ + +A E+I L G +V +DD + G +F ++LL Sbjct: 490 WPRQLAPADVHIVATGKDPAIFAEA-ERIAGALEARGLEVLYDDRPKVSPGVKFKDSELL 548 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P V+VG + ++ VE++ R G ++S EEV++ Sbjct: 549 GVPTSVVVG-RGLATGVVEVRDRAGGEIREVSPEEVVD 585 >gi|295836236|ref|ZP_06823169.1| proline-tRNA ligase [Streptomyces sp. SPB74] gi|295825921|gb|EFG64555.1| proline-tRNA ligase [Streptomyces sp. SPB74] Length = 563 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 111/281 (39%), Positives = 155/281 (55%), Gaps = 29/281 (10%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + + + G++SWLPLG+K LDN++ I+REE Sbjct: 6 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRTAAGVWSWLPLGKKVLDNISQIVREEL 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR++ YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGAQEVLLPALLPREPYEATGRWEEYGDLLFRLKDRKGADYLLGPTHEEIFTQVVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REFLMKD+YSFD T EG SY +Y Sbjct: 126 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFLMKDSYSFDTTDEGLAESYALHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI--------- 232 +IF RLGL + A SG +GG S EF+ A GE F D P Sbjct: 186 RKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDT------FADCPNCGFAANTEA 239 Query: 233 --------------PSENTDFDDIISLNSIVEQWTAPYAAT 259 P E D D ++ ++ E P +AT Sbjct: 240 VTFKGAAVDGSAHGPVEELDTPDTPTIETLAEHLGVPASAT 280 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 86/157 (54%), Gaps = 4/157 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G +GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 405 RAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLC 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP VAP + + + A + + ++ +L+ G V DD G G +F A+L+ Sbjct: 465 WPAEVAPADVHV--VAAGKVLQTELALEVADKLAAAGARVLVDDRAGVSPGVKFTDAELI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P VI G + ++ VE+K R TG RE++ +EE + Sbjct: 523 GVPKTVIAGRR-AAEGIVELKDRRTGEREELPVEEAV 558 >gi|302558076|ref|ZP_07310418.1| prolyl-tRNA synthetase [Streptomyces griseoflavus Tu4000] gi|302475694|gb|EFL38787.1| prolyl-tRNA synthetase [Streptomyces griseoflavus Tu4000] Length = 566 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 105/238 (44%), Positives = 144/238 (60%), Gaps = 10/238 (4%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + GI++WLPLG+K L NV I+REE Sbjct: 8 RMSQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGIWTWLPLGKKVLANVERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR+D YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVLLPALLPREPYEATGRWDEYGPELFRLQDRKGGDYLLGPTHEEIFTLMVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REFLMKD+YSFDL EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQSKYRDEARPRAGILRGREFLMKDSYSFDLEDEGLAKSYALHRAAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++F RLGL A +G +GG S EF+ A+ GE F D P N DF Sbjct: 188 QKVFERLGLDYRICAATAGAMGGSKSEEFLAPAEAGEDT------FADCP----NCDF 235 Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 89/158 (56%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ + G +GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 408 RAIEIGHIFQLGRKYADALKLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLC 467 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLL 398 WP VAP + + + A + + ++ +LS G V DD G G +F ++L+ Sbjct: 468 WPAEVAPADVHV--VAAGKALQTELALEVSEKLSAAGLRVLVDDRPGVSPGVKFTDSELI 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P Q++V + ++ VE+K R TG RE++++EE + Sbjct: 526 GVP-QILVAGRRAAEGVVELKDRRTGEREELTIEEALT 562 >gi|325571083|ref|ZP_08146655.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325156168|gb|EGC68354.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 569 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 98/230 (42%), Positives = 147/230 (63%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE SH+L++R G I Q + GIY +LPL Q+ L+ + +IREE Sbjct: 1 MKQSKCLIPTLRETPSDAETLSHQLLVRAGYIRQVAAGIYVYLPLAQRVLEKIKRVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+EM++P+L + W ESGR YG+ + RL DRN++ ++ GPTHEE T + ++ Sbjct: 61 LAEIDAVEMAMPSLLPYEPWKESGRASLYGESLYRLTDRNEREIVLGPTHEEPFTTLIKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ K+RDE RPRFG++RSREF+M+D YSF +YN+ ++ Sbjct: 121 EITSYKRLPLSLYQIQTKYRDEQRPRFGLIRSREFIMQDGYSFHADEASLDQTYNRYEMA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I R G++ + ++G +GG S EF+ L+ GE ++ C D+ Sbjct: 181 YHAILKRCGIEYRAVVGDNGLMGGRDSKEFLALSGIGE-ELICYSTESDY 229 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 1/167 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIEVGHIF GTKYS AT +G + + MG YG+G R+++ ++E + GI Sbjct: 403 TRGIEVGHIFKLGTKYSEAQEATVVDENGDEQPIIMGCYGLGVSRLLSTIVEQYGNEFGI 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +APF + +I D E++ +++VG V DD E+ G +FA ADL+ Sbjct: 463 DWPQEIAPFDVHIIQTSIEDSYQNALSEEVEEMMNQVGYQVLVDDRNERAGVKFADADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G P+++ +G K V + VEIK + TG ++ EEV + + +N Sbjct: 523 GCPIRLTIGKKAV-EGIVEIKIKHTGATVEVRKEEVASTLTILLANQ 568 >gi|319441431|ref|ZP_07990587.1| prolyl-tRNA synthetase [Corynebacterium variabile DSM 44702] Length = 585 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 100/225 (44%), Positives = 140/225 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S +FL L+E+P DAE+ SHKL++R G I + + G+YSWLPLG + L N+ AI+R E Sbjct: 4 RMSSFFLRTLREDPADAEVPSHKLLVRAGYIRRVTPGVYSWLPLGLRVLHNIEAIVRREM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ +P L + + S R+ YG +LRL DR + GPTHEE+ TD+ + Sbjct: 64 NAIGAQEIRLPALLPREPYERSNRWTEYGDSLLRLKDRKGADYLLGPTHEEMFTDLVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSF + G +Y V+Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFIMKDSYSFTMDDAGLDEAYQAHRVAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 RIF LG++ A SG +GG S EF+ ++ +GE + D Sbjct: 184 QRIFDSLGVEYAICAATSGAMGGSASEEFLAVSASGEDTFVRATD 228 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 3/146 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ +GK MGSYG+G R++A + E HD KG+ Sbjct: 422 RGIEIGHIFQLGRKYTEAFDVKILDENGKRSVPTMGSYGLGVSRLIAVLAEQMHDDKGLR 481 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +VAPF + ++ I D +A + L G +V +D+ + G +F A+LL Sbjct: 482 WPTTVAPFDVHVV-IANKDAAAGEAAGSLAGELDAAGLEVIFDERPKVGPGVKFKDAELL 540 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G PL VIVG F ++ VE+++RLTG Sbjct: 541 GMPLVVIVGRGF-AEGTVELRNRLTG 565 >gi|296877243|ref|ZP_06901283.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 15912] gi|296431763|gb|EFH17570.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 15912] Length = 616 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKGIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREGSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R G+ + + G +GG S EF+ + Sbjct: 181 YERIFTRSGIDFKAIIGDGGAMGGKDSQEFMAV 213 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 19/188 (10%) Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 +TA Y +V ++ P+ K V ARGIE+GHIF GT+YS M A +G+ Sbjct: 414 FTAEYVDIREVREGEIS---PDGKGVLKFARGIEIGHIFKLGTRYSASMGADVLDENGRA 470 Query: 310 HYVQMGSYGIGAMRVVAAVIES--------SHDGK-----GIIWPDSVAPFKISLINIKA 356 + MG YGIG R+++AV+E + G+ GI +P +APF + LI + Sbjct: 471 VPIIMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNI 530 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D+ +I L G +V DD E+ G +F+ +DL+G P++V VG K ++ V Sbjct: 531 KDEASLALTNQIEESLVNKGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIV 589 Query: 417 EIKHRLTG 424 E+K + TG Sbjct: 590 EVKIKATG 597 >gi|327468388|gb|EGF13873.1| proline--tRNA ligase [Streptococcus sanguinis SK330] Length = 616 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDAAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + +I + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHMIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|288904427|ref|YP_003429648.1| prolyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|306830460|ref|ZP_07463630.1| proline--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977424|ref|YP_004287140.1| prolyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731152|emb|CBI12700.1| prolyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|304427485|gb|EFM30587.1| proline--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177352|emb|CBZ47396.1| proS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 618 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ AI+REE Sbjct: 1 MKQSQMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKAIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF EG +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHADYEGLDTTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 16/190 (8%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ K + P+ K V ARGIE+GHIF GT+YS M AT +G+ + MG YG Sbjct: 420 DIREVKEGEISPDGKGVLKFARGIEIGHIFKLGTRYSESMGATILDQNGRAIPIVMGCYG 479 Query: 319 IGAMRVVAAVIES------SHDGK-------GIIWPDSVAPFKISLINIKAHDQVCRDAC 365 IG R+++AVIE S K GI +P +APF + +I + D+ + Sbjct: 480 IGVSRILSAVIEQHARLFVSKTPKGAYRFAWGINFPKELAPFDVHVITVNVKDEEAQALT 539 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 K+ A L G +V DD E++GS+F+ +DL+G P++V VG K +D VE+K + TG Sbjct: 540 AKVEAELVAKGYEVLVDDRNERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKATGD 598 Query: 426 REDMSLEEVI 435 +++ E +I Sbjct: 599 TIEVNAENLI 608 >gi|170782218|ref|YP_001710551.1| prolyl-tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] gi|189083492|sp|B0RDZ1|SYP_CLAMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169156787|emb|CAQ01950.1| prolyl tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] Length = 590 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 103/217 (47%), Positives = 138/217 (63%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+ L+E+P DAE+ASH+L++R G I + + GI++WLPLG + + V AI+REE Sbjct: 4 RLSKLFVRTLREDPVDAEVASHRLLVRAGYIRRQAPGIFAWLPLGLRVKNKVEAIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 R GA E+ P L A+ + +GRYD YG M RL DR M+ PTHEE + + Sbjct: 64 ERIGAQEVHFPALLPAEPYQATGRYDEYGPGMFRLEDRKRAPMVLAPTHEEFFALLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQIQ K+RDE RPR G++R REF MKDAYSFD T G SY +Y Sbjct: 124 YSSYKDLPLSIYQIQDKYRDEARPRAGILRGREFTMKDAYSFDHTDAGLAVSYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RLGL+ + + A++G +GG S EF+ GE Sbjct: 184 ERIFQRLGLEYVIVAADAGAMGGSKSEEFLHPTPIGE 220 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 88/158 (55%), Gaps = 3/158 (1%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARG E+GH+F G KY+ + +GK V MGSYGIG R +A V E++ DG+G Sbjct: 427 TARGTEIGHVFELGRKYAEALGLKVLDENGKLVTVTMGSYGIGITRNLALVAEATQDGRG 486 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVAD 396 ++WP S++PF + ++ + D A E++ L G DV +DD + G +F A+ Sbjct: 487 LLWPASISPFDVHVV-MTGKDPAVGTAAEELVDALDAAGLDVLFDDRPKVSPGVKFGDAE 545 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L+G P VIVG V D E+ R T R ++L +V Sbjct: 546 LIGVPTVVIVGRGAV-DGMAELWDRRTNERTPVALADV 582 >gi|306832697|ref|ZP_07465834.1| proline--tRNA ligase [Streptococcus bovis ATCC 700338] gi|304425153|gb|EFM28282.1| proline--tRNA ligase [Streptococcus bovis ATCC 700338] Length = 618 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ AI+REE Sbjct: 1 MKQSQMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKAIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF EG +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHADYEGLDTTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 16/190 (8%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ K + P+ K V ARGIE+GHIF GT+YS M AT +G+ + MG YG Sbjct: 420 DIREVKEGEISPDGKGVLKFARGIEIGHIFKLGTRYSESMGATILDQNGRAIPIIMGCYG 479 Query: 319 IGAMRVVAAVIES------SHDGKG-------IIWPDSVAPFKISLINIKAHDQVCRDAC 365 IG R+++AVIE S KG I +P +APF + +I + D+ + Sbjct: 480 IGVSRILSAVIEQHARLFVSKTPKGAYRFAWGINFPKELAPFDVHVITVNVKDEEAQALT 539 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 K+ A L G +V DD E++GS+F+ +DL+G P++V VG K +D VE+K + TG Sbjct: 540 AKVEAELVAKGYEVLVDDRNERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKATGD 598 Query: 426 REDMSLEEVI 435 +++ E +I Sbjct: 599 TIEVNAENLI 608 >gi|148273336|ref|YP_001222897.1| prolyl-tRNA synthetase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|166980116|sp|A5CSZ7|SYP_CLAM3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|147831266|emb|CAN02222.1| proS [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 590 Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 103/217 (47%), Positives = 138/217 (63%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+ L+E+P DAE+ASH+L++R G I + + GI++WLPLG + + V AI+REE Sbjct: 4 RLSKLFVRTLREDPVDAEVASHRLLVRAGYIRRQAPGIFAWLPLGLRVKNKVEAIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 R GA E+ P L A+ + +GRYD YG M RL DR M+ PTHEE + + Sbjct: 64 ERIGAQEVHFPALLPAEPYQATGRYDEYGPGMFRLEDRKRAPMVLAPTHEEFFALLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQIQ K+RDE RPR G++R REF MKDAYSFD T G SY +Y Sbjct: 124 YSSYKDLPLSIYQIQDKYRDEARPRAGILRGREFTMKDAYSFDHTDAGLAVSYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RLGL+ + + A++G +GG S EF+ GE Sbjct: 184 ERIFQRLGLEYVIVAADAGAMGGSKSEEFLHPTPIGE 220 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 3/161 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + RG E+GH+F G KY+ + +GK V MGSYGIG R +A V E++ DG+ Sbjct: 426 TAGRGTEIGHVFELGRKYAEALGLKVLDENGKLVTVTMGSYGIGITRNLALVAEATQDGR 485 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVA 395 G++WP S++PF + ++ D++ A E++ L G DV +DD + G +F A Sbjct: 486 GLLWPASISPFDVHVVMTGKGDEIA-SASEELVDALDAAGLDVLFDDRPKVSPGVKFGDA 544 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +L+G P VIVG V D E+ R T R ++L +V+ Sbjct: 545 ELIGVPTIVIVGRGAV-DGMAELWDRRTNERTPVALADVVG 584 >gi|312869026|ref|ZP_07729203.1| proline--tRNA ligase [Lactobacillus oris PB013-T2-3] gi|311095452|gb|EFQ53719.1| proline--tRNA ligase [Lactobacillus oris PB013-T2-3] Length = 578 Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 137/218 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +ENP DAE SH +M R G I+Q S G++++LPL + + ++ I+ EE Sbjct: 1 MKQSKLLIPTKKENPSDAEALSHIMMERAGYIYQISAGVWAYLPLAYRVIRKIHQIMHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA +M P++ ADLW ++GRY++YG + + D ND+ I GPT EE MT+I R Sbjct: 61 MEKAGAFQMETPSMLPADLWKQTGRYEAYGDTLYKFKDHNDREYILGPTDEEAMTEILRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQI KFR+E RPR+GV+R +EF M DAYSF EG +Y + Sbjct: 121 SVKSYKKLPLVVYQITDKFRNEPRPRYGVLRGKEFSMLDAYSFAADEEGLDEAYQAQAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y IF R GL + A+SG IGGD S EF A+ GE Sbjct: 181 YRNIFDRAGLSYKVILADSGTIGGDNSQEFSAPAEIGE 218 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/156 (39%), Positives = 93/156 (59%), Gaps = 1/156 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIE+GHIF GT YS + A +G+ + MG YGIG R+++AV E + D G++W Sbjct: 408 GIEIGHIFKLGTGYSKKLGAQVLDKNGRLVDMIMGCYGIGVTRMLSAVAEQNADENGLVW 467 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 PDS+APF + +I + A ++ +L+ G +V DD E+ G +FA +DL+G Sbjct: 468 PDSIAPFDVHVIPVNAKKDEQMTMANELEQQLTAAGYEVLVDDRKERAGVKFADSDLIGI 527 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 PL+V +G K +D VE+K R TG ++ EE++N Sbjct: 528 PLRVTIGKK-AADGIVEVKIRKTGETLEVKQEELVN 562 >gi|332359971|gb|EGJ37785.1| proline--tRNA ligase [Streptococcus sanguinis SK1056] Length = 616 Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDAAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPLIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALTLTDQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|325688976|gb|EGD30984.1| proline--tRNA ligase [Streptococcus sanguinis SK115] Length = 616 Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDAAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALTLTDQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|313819523|gb|EFS57237.1| prolyl-tRNA synthetase [Propionibacterium acnes HL046PA2] Length = 581 Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 139/215 (64%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 2 SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMAS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 62 IGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY+ LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+R Sbjct: 122 SYKALPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RLG ++A SGP+GG S EF+ +A GE Sbjct: 182 IFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGE 216 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 418 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 478 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + + D VE++ R TG +S+ E + Sbjct: 537 GMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 >gi|262202081|ref|YP_003273289.1| prolyl-tRNA synthetase [Gordonia bronchialis DSM 43247] gi|262085428|gb|ACY21396.1| prolyl-tRNA synthetase [Gordonia bronchialis DSM 43247] Length = 576 Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 107/269 (39%), Positives = 158/269 (58%), Gaps = 7/269 (2%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+++P DAE+ SHKL++R G + + + G+Y+WLPLG + L + ++REE + Sbjct: 2 STLFLRTLRDDPADAEVPSHKLLVRGGYVRRAAPGVYTWLPLGLRVLKAIENVVREEMDA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ +P L D + +GR+ YG + RL DR M+ GPTHEE+ ++ + Sbjct: 62 IGAQEILLPALLPRDPYETTGRWTEYGDALFRLKDRKGADMLLGPTHEELFANLVKGEYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP YQIQ K+RDE RPR G++R REF+MKDAYSFDL +G K SY +Y R Sbjct: 122 SYKDLPVILYQIQTKYRDEERPRAGILRGREFVMKDAYSFDLDDDGLKVSYQAHREAYQR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDFDDI 242 +F RLG+K + + A SG +GG S EF+ ++ GE T V C + + + T + Sbjct: 182 LFARLGVKYVIVAATSGAMGGSASEEFLAESEVGEDTFVRCLESGYAANVEAVITPAPEP 241 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 I + + P A T D + D+L Sbjct: 242 IPFDGL------PVATTYDTGDTPTIDTL 264 Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 63/170 (37%), Positives = 90/170 (52%), Gaps = 4/170 (2%) Query: 269 DSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ K VSA+GIE+GHIF G KY+ G GK + MGSYG+G R+VA Sbjct: 401 DPSPDGKGPLVSAKGIEIGHIFQLGQKYTDAFEVDVLGESGKPVRLTMGSYGVGVSRLVA 460 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + E HD KG+ WP VAPF + L+ D A E + L G V DD Sbjct: 461 VIAEQCHDDKGLRWPREVAPFAVHLVIANKDDAAVTGAGE-LAEDLDAAGVSVLLDDRKA 519 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G +F A+LLG P V+VG + ++ +EI+ R TG +++++ ++ Sbjct: 520 SPGVKFKDAELLGMPTVVVVGRGY-ANGTIEIRDRFTGETTEVAVDSAVD 568 >gi|308176793|ref|YP_003916199.1| proline--tRNA ligase [Arthrobacter arilaitensis Re117] gi|307744256|emb|CBT75228.1| proline--tRNA ligase [Arthrobacter arilaitensis Re117] Length = 595 Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 101/218 (46%), Positives = 142/218 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ S FL L+E+P DAE+ASHKL++R G I + + GIY+WLPLG K L V AI+REE Sbjct: 3 LKLSTTFLRTLREDPVDAEVASHKLLVRAGYIRRAAPGIYTWLPLGLKVLARVEAIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P L + + ++GR+ YG + RL DR D + PTHEE+ T + + Sbjct: 63 MNAIGAQEVHFPALLPREPYEQTGRWAEYGDGLFRLKDRKDADYLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF++ EG +Y + Sbjct: 123 LYNSYKDLPVYLYQIQNKYRDEARPRAGLLRGREFIMKDSYSFNIDDEGLDEAYMAHRGA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 YL+IF RLGL+ +P+ A++G +GG S EF+ GE Sbjct: 183 YLKIFERLGLEVVPVFAQAGAMGGSKSEEFLHPTAIGE 220 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 3/159 (1%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RGIE+GHIF G KY+ ++ +GK V MGSYGIG R VAA+ E+ HD G Sbjct: 434 TERGIEMGHIFQLGRKYAEALNLKVLDQNGKQTVVTMGSYGIGVTRAVAALAEAYHDENG 493 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVAD 396 + WP VAP I ++ + +A EK+ + G +V DD + G +F+ A+ Sbjct: 494 LAWPKQVAPADIHIV-VTGKGPELLEAAEKLAGQFEAAGKEVILDDRPKVSAGVKFSDAE 552 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L+G P V+VG + ++D VE+K R TG R D+++E V+ Sbjct: 553 LIGIPTIVVVG-RGLADGVVEVKDRATGERRDVNVENVV 590 >gi|261212071|ref|ZP_05926357.1| prolyl-tRNA synthetase [Vibrio sp. RC341] gi|260838679|gb|EEX65330.1| prolyl-tRNA synthetase [Vibrio sp. RC341] Length = 546 Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 97/201 (48%), Positives = 135/201 (67%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+R+E + GAIE +P +Q +LW E+GR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGLRVLRKVETIVRQEIDNAGAIETLMPVVQPFELWEETGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 + G E+LR DR+++ + PT EEV+T + R+ + SY+ LP YQIQ KFRDE RP Sbjct: 61 SEKMGPELLRFTDRHERPFVLSPTAEEVITALVRNEVNSYKQLPLNLYQIQTKFRDERRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMR+REF M DAYSFD+ +G + SY+ M +Y + F R+GL P+ A+SG IGG+ Sbjct: 121 RFGVMRAREFSMMDAYSFDIDKDGLQKSYDAMHAAYCKAFDRMGLDYRPVLADSGAIGGN 180 Query: 206 LSHEFIVLADTGETQVFCSKD 226 S EF VLA++GE + S + Sbjct: 181 GSQEFHVLAESGEDLIVFSTE 201 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 107/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 382 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 441 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 442 WPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 501 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +I+G + + + E K+R G +E +++E +I++ + + Sbjct: 502 GVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 546 >gi|325695492|gb|EGD37392.1| proline--tRNA ligase [Streptococcus sanguinis SK150] Length = 616 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALTLTDQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + +G Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKASG 597 >gi|328944571|gb|EGG38732.1| proline--tRNA ligase [Streptococcus sanguinis SK1087] Length = 616 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEDAVALTDQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|327488783|gb|EGF20582.1| proline--tRNA ligase [Streptococcus sanguinis SK1058] Length = 616 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDAAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ +I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNIKDEEALALTNQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|198413603|ref|XP_002126928.1| PREDICTED: similar to prolyl-tRNA synthetase (mitochondrial)(putative) [Ciona intestinalis] Length = 435 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 138/450 (30%), Positives = 219/450 (48%), Gaps = 51/450 (11%) Query: 11 LQENP----RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +QEN R ++ S L+L++ I SKGIY ++P K+L+ + ++I E+ A Sbjct: 19 MQENIISTFRASDSRSANLLLQSSFISPSSKGIYHFMPPLVKSLEKLTSLIDEKMKNICA 78 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK--- 123 ++ + L D+W SGR+D++GKE++ + + PTHEE + + Sbjct: 79 QKVQMSMLSGKDIWSLSGRWDAFGKELIT-TNLGEAKHCLSPTHEEAVCKVLSQTFNKFL 137 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR+LP YQ KFR+E P+ G++R REFLM D Y+FD T + + +YN + Y Sbjct: 138 SYRHLPLRLYQTNTKFRNEPDPQRGLLRCREFLMNDLYTFDTTKKAAVETYNAVCNIYEE 197 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 F L + +A SG IGGD SHE+ +LA GE +F D Sbjct: 198 FFKELNIPVTKAQAGSGLIGGDFSHEYHILAGVGEDNIFICPD----------------- 240 Query: 244 SLNSIVEQWTAPYAATSDVHN-EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A S+ N EK D+L + GIEVGH FY G KYS +F Sbjct: 241 ----------TGQAWNSECTNIEKKLDTLKQ-----VDGIEVGHTFYLGKKYSKMFKTSF 285 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 D K +MG YG+G R++AA +E G+ WP +AP+K+ L+ K + Sbjct: 286 LTPDSKPVPCEMGCYGLGVTRILAACLEVLSTESGMRWPHKIAPYKVCLVLPKTGSKEFE 345 Query: 363 D---ACEKIYARLSK---VGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKFVSD-- 413 + A ++ +L + DV DD ++ IG + A+L+G+PL ++ G S+ Sbjct: 346 NGTAAVNNVFDKLQNYPLLKNDVIIDDTPKRSIGWKTKHANLIGYPLVIVFGKGLNSEEQ 405 Query: 414 -SKVEIKHRLTGIREDMSLEEVINYASHRF 442 ++V I++ + + + L+ V+ + F Sbjct: 406 YAEVIIQNPDQQLTKHVPLQNVVEFIHDYF 435 >gi|195336930|ref|XP_002035086.1| GM14112 [Drosophila sechellia] gi|194128179|gb|EDW50222.1| GM14112 [Drosophila sechellia] Length = 458 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 136/425 (32%), Positives = 212/425 (49%), Gaps = 47/425 (11%) Query: 2 RRSKYFLPILQENPRDAEIA-------SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G++ S G Y +P+ Q+++D Sbjct: 3 KASRIFCPSLI-TPKNAVVKQTEQLSRSQKLLTELGLVKSGSNGTYQIMPMAQRSVDKFI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ + G ++++P L LW ++GR + E + DR+ K + PTHEE + Sbjct: 62 NLVQSNMQQAGGQKITLPILTPTGLWKKTGRLEGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 TDIFRSHIK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP +QI KFRDEL+ RFG+MR++EFLMKD YSFD++ E ++ + Sbjct: 122 TAMLATTSPISYRQLPLRLFQIGPKFRDELKTRFGLMRAKEFLMKDMYSFDVSEETARET 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPI 232 Y+ + +Y R+F +L + + + A +G +GG +SHE+ ++ GE + CS F Sbjct: 182 YSVVNSAYDRLFKQLEVPFVKVNAATGIMGGSVSHEYHYVSSVGEDNLLQCSS--CGFAG 239 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 SE + + P +SD+ RG+EV H F Sbjct: 240 NSE-----------VVKAPASCPSCNSSDLKE--------------VRGVEVAHTFLLED 274 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS P+ ATF GK + MG YGIG RV+AA +E + WP +AP+ LI Sbjct: 275 KYSKPLGATFLNTSGKPQSLVMGCYGIGITRVIAAALEVLSSDHELHWPKLLAPYDACLI 334 Query: 353 NIK--AHDQVCRDACEKIYARLSKVG--C---DVFWDDMGE-QIGSQFAVADLLGFPLQV 404 K + +Q + E L VG C ++ DD E IG + A LG PL + Sbjct: 335 GPKQGSKEQPQAEVIEN--ELLLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTI 392 Query: 405 IVGSK 409 +VG+K Sbjct: 393 VVGAK 397 >gi|162139703|ref|YP_819759.2| prolyl-tRNA synthetase [Streptococcus thermophilus LMD-9] gi|148887037|sp|Q03MK9|SYP_STRTD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 620 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 140/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY+++PL +A++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTVLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDAYSFHQNYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL+ + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLEFKAIIGDGGAMGGKDSQEFMAV 213 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +AP+ + LI + D+ +++ A L+ G DV DD Sbjct: 500 KTPKGQYRYAWGINFPKELAPYDVHLITVNTKDEEANALTDRLEAALAAEGYDVLIDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + TG Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATG 597 >gi|332365115|gb|EGJ42878.1| proline--tRNA ligase [Streptococcus sanguinis SK1059] Length = 616 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEDAVALTDQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|307708104|ref|ZP_07644572.1| prolyl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307615889|gb|EFN95094.1| prolyl-tRNA synthetase [Streptococcus mitis NCTC 12261] Length = 617 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDDEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|289168683|ref|YP_003446952.1| prolyl-tRNA synthetase [Streptococcus mitis B6] gi|288908250|emb|CBJ23092.1| prolyl-tRNA synthetase [Streptococcus mitis B6] Length = 617 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|324989750|gb|EGC21693.1| proline--tRNA ligase [Streptococcus sanguinis SK353] Length = 616 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEDAVALTDQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|322377188|ref|ZP_08051680.1| proline--tRNA ligase [Streptococcus sp. M334] gi|321281901|gb|EFX58909.1| proline--tRNA ligase [Streptococcus sp. M334] Length = 617 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|307710999|ref|ZP_07647421.1| prolyl-tRNA synthetase [Streptococcus mitis SK321] gi|307616961|gb|EFN96139.1| prolyl-tRNA synthetase [Streptococcus mitis SK321] Length = 617 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|332359309|gb|EGJ37130.1| proline--tRNA ligase [Streptococcus sanguinis SK49] Length = 616 Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPLIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEAVTLTDQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|307704119|ref|ZP_07641047.1| prolyl-tRNA synthetase [Streptococcus mitis SK597] gi|307622341|gb|EFO01350.1| prolyl-tRNA synthetase [Streptococcus mitis SK597] Length = 617 Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNIKDEEAQALTEKLEANLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|254446533|ref|ZP_05060009.1| prolyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] gi|198260841|gb|EDY85149.1| prolyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] Length = 588 Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 101/225 (44%), Positives = 149/225 (66%), Gaps = 7/225 (3%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK ++P L+E+P +AEI SHKL+LR G++ + GIY++LPLG KAL+NV + EE NR Sbjct: 5 SKNYIPTLKESPAEAEIDSHKLLLRAGLVRKVGSGIYAFLPLGTKALENVKRLCCEEMNR 64 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-------MIYGPTHEEVMTD 116 GA+E+ +P + A+ W R+++ + M ++A +KA + GPTHEE++T Sbjct: 65 AGAMELLMPAVVPAEYWKAGPRWNAAREIMYQVASAGEKAEFPEEPAFVLGPTHEEIVTL 124 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + SYR++ TFYQ+Q KFR+E+RPR+G+MR+REF+MKD YSFD T E + +Y Sbjct: 125 LIGGEGMSYRDMGKTFYQVQTKFRNEIRPRYGLMRAREFIMKDGYSFDATDEEATATYKN 184 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 M +Y F R GLK I + A++G +GG SHEF+V A+ G+ V Sbjct: 185 MAKAYEAFFSRCGLKFISVEADTGVMGGAFSHEFMVPAEVGDDDV 229 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 77/144 (53%), Gaps = 2/144 (1%) Query: 280 RGIEVGHIFYFGTKYSL--PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 R IEVGHIF GTKYS A + DG MG YGIG R + ++IE HD G Sbjct: 419 RAIEVGHIFKLGTKYSENEEFGALYVDKDGNRQPSVMGCYGIGISRTLQSIIEQKHDKNG 478 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I+WP +VAP+++ + + + K+ G V DD E+ G +F ADL Sbjct: 479 IVWPWAVAPYQVIITVLDPGMEEADTLAIKLGEAAEAAGASVLVDDREERPGVKFKDADL 538 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 +G PL+V +G + + + +VE+K R Sbjct: 539 IGIPLRVTIGGRGLKNGEVEMKWR 562 >gi|325686585|gb|EGD28611.1| proline--tRNA ligase [Streptococcus sanguinis SK72] gi|325697433|gb|EGD39319.1| proline--tRNA ligase [Streptococcus sanguinis SK160] Length = 616 Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKTKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEKALALTDQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|307709960|ref|ZP_07646407.1| prolyl-tRNA synthetase [Streptococcus mitis SK564] gi|307619331|gb|EFN98460.1| prolyl-tRNA synthetase [Streptococcus mitis SK564] Length = 617 Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|323350534|ref|ZP_08086196.1| proline--tRNA ligase [Streptococcus sanguinis VMC66] gi|322123216|gb|EFX94901.1| proline--tRNA ligase [Streptococcus sanguinis VMC66] Length = 616 Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSSGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|324992477|gb|EGC24398.1| proline--tRNA ligase [Streptococcus sanguinis SK405] gi|324995993|gb|EGC27904.1| proline--tRNA ligase [Streptococcus sanguinis SK678] gi|327460709|gb|EGF07044.1| proline--tRNA ligase [Streptococcus sanguinis SK1] gi|327472430|gb|EGF17861.1| proline--tRNA ligase [Streptococcus sanguinis SK408] Length = 616 Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ +I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNIKDEEALALTNQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|254382091|ref|ZP_04997453.1| prolyl-tRNA synthetase 1 [Streptomyces sp. Mg1] gi|194340998|gb|EDX21964.1| prolyl-tRNA synthetase 1 [Streptomyces sp. Mg1] Length = 565 Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 104/238 (43%), Positives = 143/238 (60%), Gaps = 1/238 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+E+P DAE SHKL++R G + + S G+++WLPLG++ LDNV+ ++REE Sbjct: 8 RMSRLMAKTLREDPADAETLSHKLLVRAGYVRRSSAGVWTWLPLGKRVLDNVSRVVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR+ YG + RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVLLPALLPKEPYEVSGRWSEYGDLLFRLKDRKGADYLLGPTHEEIFTLVVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD++ EG SY +Y Sbjct: 128 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDVSDEGLAESYALHRAAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 RIF RLGL + A SG +GG S EF+ A GE F D+ +E F Sbjct: 188 RRIFERLGLDHRIVSAVSGAMGGSASEEFLAPAAAGE-DTFVDCPSCDYAANTEAVTF 244 Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 84/157 (53%), Gaps = 4/157 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ G +GK V MGSYGIG R VAA+ E + D +G+ Sbjct: 408 RAIEIGHIFQLGRKYADAFGLDVLGREGKPVRVTMGSYGIGVSRAVAALAEQTADERGLC 467 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP VAP + + + A V E A LS G V DD G G + A+L+ Sbjct: 468 WPAEVAPADVHV--VAAGKAVPLALAESAAAALSASGLRVLLDDRAGLSPGVKLTDAELI 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++V + D VE++HR TG RE+++L+E + Sbjct: 526 GVPW-ILVAGRRSGDGVVELQHRPTGTREELTLDEAL 561 >gi|316974411|gb|EFV57903.1| proline--tRNA ligase [Trichinella spiralis] Length = 413 Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 139/401 (34%), Positives = 207/401 (51%), Gaps = 42/401 (10%) Query: 22 SHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 S +LML G+I + KG++ +LP+G +AL+ + IIR E + GA M++ L +W Sbjct: 5 SQRLMLDNGLIEYVGGKGLFHYLPVGLRALEKLCIIIRHEMDLLGAGRMALSNLCERSVW 64 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR--SHIKSYRNLPFTFYQIQLK 138 ++GR++ E+LRL DR K PTHEE +T + S I S R LP YQI LK Sbjct: 65 EQTGRWEEVSAELLRLKDRKGKEYCLCPTHEESVTSLISRFSPITSSR-LPLLLYQITLK 123 Query: 139 FRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE 198 +RDE PRFG+ R+REF MKD YSFDL + + +Y+ + +Y IF LG+K + A Sbjct: 124 YRDEPNPRFGLARAREFFMKDMYSFDLDTKSAMKTYDAVNKAYFSIFQTLGIKVHRVEAA 183 Query: 199 SGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 G IGG+LSHEF + GE + C K F + + +NS Sbjct: 184 VGSIGGNLSHEFHCESQYGEDYILMCEKC---------QKKFTEEVLVNS---------- 224 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 T V NE P K R +E+ H F+ G KYS + AT G +QMG + Sbjct: 225 TTCPVCNE------PFQK---VRSLELAHTFFLGEKYSQALGATVTCNPGSPIPLQMGCF 275 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ------VCRDACEKIYAR 371 GIG R++AA+++ + I WP +AP+K+ +I K + + E++ + Sbjct: 276 GIGISRLLAAIVDYFSSDEEIRWPLCIAPYKVCVIPPKNGSREYPATPMALHLAEQL-SS 334 Query: 372 LSKVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKFV 411 L+ ++ +DD Q +G++ A G+P VIV +K V Sbjct: 335 LANFNEEIVYDDRTHQTVGTRLRDAKRRGYPY-VIVANKTV 374 >gi|15900198|ref|NP_344802.1| prolyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|81855097|sp|Q97SR1|SYP_STRPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|14971734|gb|AAK74442.1| prolyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] Length = 617 Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|148994606|ref|ZP_01823748.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|168489739|ref|ZP_02713938.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|147927136|gb|EDK78174.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|183571778|gb|EDT92306.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|332075929|gb|EGI86396.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA17570] Length = 617 Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|294631730|ref|ZP_06710290.1| prolyl-tRNA synthetase [Streptomyces sp. e14] gi|292835063|gb|EFF93412.1| prolyl-tRNA synthetase [Streptomyces sp. e14] Length = 567 Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 105/238 (44%), Positives = 143/238 (60%), Gaps = 10/238 (4%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + G++SWLPLG++ L NV I+REE Sbjct: 8 RMSQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGVWSWLPLGRRVLANVERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR+D YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVLLPALLPKEPYEATGRWDEYGGELFRLKDRKGGDYLLGPTHEEIFTLLVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REFLMKD+YSFD EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQSKYRDEARPRAGILRGREFLMKDSYSFDTADEGLAESYALHRQAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 RIF RLGL A +G +GG S EF+ A+ GE F D P N DF Sbjct: 188 QRIFERLGLDYRICAATAGAMGGSKSEEFLAPAEAGEDT------FADCP----NCDF 235 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ + G +GK V MGSYGIG R VAA+ E D G++ Sbjct: 409 RAIEIGHIFQLGRKYTDALKLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQHADEHGLV 468 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP VAP + + + A + + + +L+ G V DD G G +F A+L+ Sbjct: 469 WPAEVAPADVHV--VAAGKALQTEVALDVSQKLAAAGVRVLVDDRAGVSPGVKFTDAELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P Q++V + + +E+K+R TG RE++++EE + Sbjct: 527 GVP-QILVAGRRAGEGVLELKNRRTGEREELTVEEALT 563 >gi|168485970|ref|ZP_02710478.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] gi|183570860|gb|EDT91388.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] Length = 617 Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLTPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|182683244|ref|YP_001834991.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|303259373|ref|ZP_07345350.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|303261128|ref|ZP_07347077.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|303263456|ref|ZP_07349379.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|303265748|ref|ZP_07351646.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|303267821|ref|ZP_07353623.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|226701345|sp|B2ISI9|SYP_STRPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|182628578|gb|ACB89526.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|302637965|gb|EFL68451.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|302639307|gb|EFL69765.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|302642517|gb|EFL72862.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|302644656|gb|EFL74905.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|302647229|gb|EFL77453.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS397] Length = 617 Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-ATDGIVEVKIKATG 597 >gi|148988004|ref|ZP_01819467.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|148996688|ref|ZP_01824406.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|149001621|ref|ZP_01826594.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|168484646|ref|ZP_02709598.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|168493960|ref|ZP_02718103.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|168576309|ref|ZP_02722192.1| prolyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|169833273|ref|YP_001693792.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|225860301|ref|YP_002741810.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|237649666|ref|ZP_04523918.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974] gi|237821366|ref|ZP_04597211.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2] gi|298229643|ref|ZP_06963324.1| prolyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298256044|ref|ZP_06979630.1| prolyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502082|ref|YP_003724022.1| proline--tRNA ligase [Streptococcus pneumoniae TCH8431/19A] gi|307066942|ref|YP_003875908.1| prolyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|226701344|sp|B1I8Z1|SYP_STRPI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782922|sp|C1CPD8|SYP_STRZT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|147757263|gb|EDK64302.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|147760079|gb|EDK67068.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|147926468|gb|EDK77541.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|168995775|gb|ACA36387.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|172042164|gb|EDT50210.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|183576158|gb|EDT96686.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|183577873|gb|EDT98401.1| prolyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|225727194|gb|ACO23045.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298237677|gb|ADI68808.1| proline--tRNA ligase [Streptococcus pneumoniae TCH8431/19A] gi|301801205|emb|CBW33879.1| prolyl-tRNA synthetase [Streptococcus pneumoniae INV200] gi|306408479|gb|ADM83906.1| Prolyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|327390681|gb|EGE89021.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA04375] gi|332077566|gb|EGI88027.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA41301] gi|332202178|gb|EGJ16247.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA41317] gi|332203430|gb|EGJ17497.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA47368] gi|332204272|gb|EGJ18337.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA47901] Length = 617 Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|326382934|ref|ZP_08204624.1| prolyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] gi|326198524|gb|EGD55708.1| prolyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] Length = 576 Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 137/215 (63%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+++P DAE+ SHKL++R G I + + GIY WLPLG K V ++REE + Sbjct: 2 SNLFLRTLRDDPADAEVPSHKLLVRAGYIRRAAPGIYEWLPLGLKVFRAVENLVREEMDA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ +P L D + +GR+ YG + R+ DR M+ GPTHEE+ T + + Sbjct: 62 MGAQEILLPALLPRDPYETTGRWTEYGPALFRVKDRKGADMMLGPTHEEIFTQLVKGEYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G + SY+ +Y R Sbjct: 122 SYKDLPVTLYQIQTKYRDEERPRAGLLRGREFVMKDSYSFDIDDAGLQASYDAHRAAYQR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RLG+K + + A SG +GG S EF+ + GE Sbjct: 182 IFDRLGVKYVIVAATSGAMGGSASEEFLAECEVGE 216 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 90/158 (56%), Gaps = 4/158 (2%) Query: 269 DSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ K V +A+GIE+GHIF G KY+ + G +GK MGSYG+G R+VA Sbjct: 401 DPSPDGKGVLETAKGIEIGHIFQLGRKYTDAFAFDVLGENGKPVRPTMGSYGLGVSRMVA 460 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + E HD KG+ WP VAPF + L+ I D+ +++ A L G V +DD Sbjct: 461 VLAEQLHDEKGLRWPREVAPFDVHLV-IANKDEAAVAGAQRLAADLDAAGVSVLFDDRKA 519 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 G +F A+LLG P+ V+VG + +D +EI+ RL+G Sbjct: 520 SPGVKFKDAELLGMPVVVVVGRGW-ADGTIEIRDRLSG 556 >gi|168492219|ref|ZP_02716362.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|183573637|gb|EDT94165.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] Length = 617 Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|149011134|ref|ZP_01832439.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|147764770|gb|EDK71700.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] Length = 617 Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-ATDGIVEVKIKATG 597 >gi|319940262|ref|ZP_08014614.1| prolyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] gi|319810564|gb|EFW06900.1| prolyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] Length = 619 Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 98/214 (45%), Positives = 137/214 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ V I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQISAGVYSYLPLANRVIEKVKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRYD+YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYDTYGEDLYKLKNREGSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 Y IF R + + + G +GG S EF+ + Sbjct: 181 YENIFTRSEVDFKGIIGDGGAMGGKDSQEFMAIT 214 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+AT +G+ V MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSESMNATVLDENGRAVPVVMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + D+ E++ A L K G +V DD Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLIPVNVKDEEALALTEQLEAELLKAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V +G K +D VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTIGKK-AADRIVEVKIKATG 597 >gi|290579880|ref|YP_003484272.1| putative prolyl-tRNA synthetase [Streptococcus mutans NN2025] gi|254996779|dbj|BAH87380.1| putative prolyl-tRNA synthetase [Streptococcus mutans NN2025] Length = 616 Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 139/214 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S +P L+E P DA++ SH LM+R G + Q S GIYS+LPL + ++ + I+REE Sbjct: 1 MKQSNMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYSYLPLAHRVIEKIKEIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T++ R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTNLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHADYDSLDATYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 Y IF R+GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRVGLDFKAIIGDGGAMGGKDSQEFMAVT 214 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 16/198 (8%) Query: 257 AATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 AA D+ ++ P+ K V ARGIE+GHIF GT+YS M + +G+ + M Sbjct: 416 AAYVDIREVCEGEASPDGKGVLKFARGIEIGHIFKLGTRYSESMGSNILDENGRSIPIIM 475 Query: 315 GSYGIGAMRVVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQVC 361 GSYGIG R+++AVIE + G+ +P ++APF + LI + D+V Sbjct: 476 GSYGIGVSRILSAVIEQNARIFVNKTPKGAYRFSWGVNFPKTLAPFDVHLITVNVKDEVS 535 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + K+ L V D+ E+IGS+F+ +DL+G P++V VG K SD VE+K + Sbjct: 536 QQLTAKVEESLVDAHYSVLTDNRNERIGSKFSDSDLIGLPIRVTVGKK-ASDGIVEVKIK 594 Query: 422 LTGIREDMSLEEVINYAS 439 TG +++ E ++ S Sbjct: 595 STGDTIEVNAENLLETLS 612 >gi|148983669|ref|ZP_01816988.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|147923816|gb|EDK74928.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|301799407|emb|CBW31944.1| prolyl-tRNA synthetase [Streptococcus pneumoniae OXC141] Length = 617 Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|327462766|gb|EGF09088.1| proline--tRNA ligase [Streptococcus sanguinis SK1057] Length = 616 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|194397930|ref|YP_002036964.1| prolyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|307126481|ref|YP_003878512.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] gi|226701343|sp|B5E6T8|SYP_STRP4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|194357597|gb|ACF56045.1| prolyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|306483543|gb|ADM90412.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] Length = 617 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|149006018|ref|ZP_01829747.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|147762374|gb|EDK69335.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] Length = 617 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|301793532|emb|CBW35907.1| prolyl-tRNA synthetase [Streptococcus pneumoniae INV104] Length = 617 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALIEKLEASLMGDGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|313816766|gb|EFS54480.1| prolyl-tRNA synthetase [Propionibacterium acnes HL059PA1] Length = 581 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 138/215 (64%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F+ L+E P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 2 SQLFVRTLREAPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMAS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 62 IGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY+ LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+R Sbjct: 122 SYKALPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RLG ++A SGP+GG S EF+ +A GE Sbjct: 182 IFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGE 216 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 418 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 478 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + + D VE++ R TG +S+ E + Sbjct: 537 GMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 >gi|225856022|ref|YP_002737533.1| prolyl-tRNA synthetase [Streptococcus pneumoniae P1031] gi|254782921|sp|C1CIE5|SYP_STRZP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225724634|gb|ACO20486.1| prolyl-tRNA synthetase [Streptococcus pneumoniae P1031] Length = 617 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKIPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|225858114|ref|YP_002739624.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|254782917|sp|C1CB39|SYP_STRP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225721841|gb|ACO17695.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 70585] Length = 617 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|303255041|ref|ZP_07341117.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|302597871|gb|EFL64941.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS455] Length = 617 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +AP + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPLDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|125718857|ref|YP_001035990.1| prolyl-tRNA synthetase [Streptococcus sanguinis SK36] gi|152112958|sp|A3CQI5|SYP_STRSV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|125498774|gb|ABN45440.1| Prolyl-tRNA synthetase, putative [Streptococcus sanguinis SK36] Length = 616 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|15902287|ref|NP_357837.1| prolyl-tRNA synthetase [Streptococcus pneumoniae R6] gi|116515963|ref|YP_815764.1| prolyl-tRNA synthetase [Streptococcus pneumoniae D39] gi|81845175|sp|Q8DRB0|SYP_STRR6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|122279350|sp|Q04MI4|SYP_STRP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|15457791|gb|AAK99047.1| Prolyl-tRNA synthetase [Streptococcus pneumoniae R6] gi|116076539|gb|ABJ54259.1| prolyl-tRNA synthetase [Streptococcus pneumoniae D39] Length = 617 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|326333619|ref|ZP_08199856.1| proline--tRNA ligase [Nocardioidaceae bacterium Broad-1] gi|325948525|gb|EGD40628.1| proline--tRNA ligase [Nocardioidaceae bacterium Broad-1] Length = 582 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 142/215 (66%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S F+ L+E+P DAE+ASHKL++R G I + + GIYSWLPLG + L V IIREE Sbjct: 2 STLFVRTLREDPADAEVASHKLLVRAGYIRRAAPGIYSWLPLGLRVLGKVEQIIREEMAS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G+ E+ P L + + +GR+ YG + RL DR + + GPTHEE+ T + + Sbjct: 62 IGSQEVHFPALLPREPYEATGRWTEYGDGIFRLKDRKEADYLLGPTHEEMFTLLVKDLYG 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+T EG + +Y +Y+R Sbjct: 122 SYKDLPLSIYQIQTKYRDEARPRAGLLRGREFIMKDSYSFDVTDEGLEAAYQAHRDAYVR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 +F RLG + + ++A SG +GG S EF+ +++ GE Sbjct: 182 VFDRLGFEYVIVKATSGAMGGSASEEFLAVSEAGE 216 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 89/163 (54%), Gaps = 3/163 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GH+F G KY+ + +GK V MGSYGIG R VAA+ E + D G+ Sbjct: 418 ARGIEMGHVFQLGRKYADALGLQVLDENGKLVTVTMGSYGIGVTRAVAAIAEGTLDEIGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP +VAP+ + L+ D +A + L G DV +DD + G +F A+L Sbjct: 478 AWPRNVAPYDVHLVAT-GKDSAVFEAAATLAEELEAAGIDVLYDDRPKVSPGVKFKDAEL 536 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +G P V VG V + K+E+K R +G + +++L + + + + Sbjct: 537 IGVPTIVTVGKGLV-EGKIEVKDRKSGEKTEVALADAVAHLTE 578 >gi|55820298|ref|YP_138740.1| prolyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|55822188|ref|YP_140629.1| prolyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] gi|81820361|sp|Q5M1N3|SYP_STRT1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81820523|sp|Q5M674|SYP_STRT2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|55736283|gb|AAV59925.1| prolyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|55738173|gb|AAV61814.1| prolyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] Length = 620 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY+++PL +A++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTVLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDAYSFHQNYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL+ + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLEFKAIIGDGGAMGGKDSQEFMAV 213 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +AP+ + LI + D+ +++ A L+ G DV DD Sbjct: 500 KTPKGQYRYAWGINFPKELAPYDVHLITVNTKDEEANALTDRLEAALAAEGYDVLIDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + TG Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATG 597 >gi|86146905|ref|ZP_01065224.1| prolyl-tRNA synthetase [Vibrio sp. MED222] gi|85835357|gb|EAQ53496.1| prolyl-tRNA synthetase [Vibrio sp. MED222] Length = 546 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/201 (48%), Positives = 134/201 (66%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+R+E + GA+E+ +P +Q +LW E+GR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFELWEETGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 + G E+LR DR+ + + PT EEV+T + R+ I SY+ LP YQIQ KFRDE RP Sbjct: 61 SEKMGPELLRFTDRHSRPFVLSPTAEEVVTSLVRNEISSYKQLPLNLYQIQTKFRDERRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMR+REF M DAYSFD+ EG + SY M +Y + F R+GL+ P+ A+SG IGG Sbjct: 121 RFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLEYRPVLADSGAIGGS 180 Query: 206 LSHEFIVLADTGETQVFCSKD 226 S EF VLA++GE + S + Sbjct: 181 GSQEFHVLAESGEDLIAFSSE 201 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 105/165 (63%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G YS M+ G DGK ++MG YGIG RVVA+ IE +HD GI Sbjct: 382 RGIEVGHIFQLGNTYSKAMNCNVLGPDGKSVILEMGCYGIGVSRVVASAIEQNHDKFGIT 441 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ +G +V +DD E+ G F +L+ Sbjct: 442 WPDALAPFQVAIVPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFKDIELV 501 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R TG +E ++++ VI + + + + Sbjct: 502 GIPHTIVIGDRSMDEGNFEYKNRRTGDKEAIAMDTVIEHLTAQLA 546 >gi|171778813|ref|ZP_02919875.1| hypothetical protein STRINF_00734 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282459|gb|EDT47883.1| hypothetical protein STRINF_00734 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 618 Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 137/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSQMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF EG +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHADYEGLDTTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/170 (37%), Positives = 97/170 (57%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------S 332 ARGIE+GHIF GT+YS M AT +G+ + MG YGIG R+++AVIE S Sbjct: 440 ARGIEIGHIFKLGTRYSESMGATILDQNGRAIPIVMGCYGIGVSRILSAVIEQHARLFVS 499 Query: 333 HDGK-------GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 K GI +P +APF + +I + D+ + K+ A L G +V D+ Sbjct: 500 KTPKGAYRFAWGINFPKELAPFDVHVITVNVKDEEAQALTAKVEAELVAKGYEVLVDNRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P++V VG K +D VE+K + TG +++ E +I Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKATGDTIEVNAENLI 608 >gi|322373816|ref|ZP_08048351.1| proline--tRNA ligase [Streptococcus sp. C150] gi|321277188|gb|EFX54258.1| proline--tRNA ligase [Streptococcus sp. C150] Length = 620 Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY+++PL +A++ AI+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKAIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHQNYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL+ + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLEFKGIIGDGGAMGGKDSQEFMAV 213 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +AP+ + LI + D+ E++ A L G DV DD Sbjct: 500 KTPKGQYRYAWGINFPKDLAPYDVHLITVNTKDEEATALTERLEAALMAEGYDVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + TG Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATG 597 >gi|312863998|ref|ZP_07724234.1| proline--tRNA ligase [Streptococcus vestibularis F0396] gi|322517545|ref|ZP_08070414.1| proline--tRNA ligase [Streptococcus vestibularis ATCC 49124] gi|311100411|gb|EFQ58618.1| proline--tRNA ligase [Streptococcus vestibularis F0396] gi|322123805|gb|EFX95379.1| proline--tRNA ligase [Streptococcus vestibularis ATCC 49124] Length = 620 Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY+++PL +A++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDAYSFHQNYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL+ + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLEFKGIIGDGGAMGGKDSQEFMAV 213 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +AP+ + LI + D+ +++ + L+ G DV DD Sbjct: 500 KTPKGQYRYAWGINFPKELAPYDVHLITVNTKDEEANALTDRLESALAAEGYDVLIDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + TG Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATG 597 >gi|206889362|ref|YP_002248875.1| prolyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|226701352|sp|B5YKW0|SYP_THEYD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|206741300|gb|ACI20357.1| prolyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 571 Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 109/247 (44%), Positives = 150/247 (60%), Gaps = 1/247 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+P ++E P SH LML+ G + Q + G++ +LPLG + L+ +N I++EE Sbjct: 1 MRYSKLFIPTMREIPSGINAISHILMLKAGYVRQLAAGLFIFLPLGWRVLNKINMILKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA E+S+P L A++W E+GR+ + +EM RL DR + M G THEE+MT I Sbjct: 61 MERIGAQEISMPILHPAEIWQETGRWYTIKEEMFRLKDRTGRDMCLGMTHEEIMTWIASK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP +YQIQ K RDE RPR GV+R+REF+MKD+YSFD+ EG SYN + Sbjct: 121 EIKSYRQLPQIWYQIQTKLRDEARPRGGVLRTREFIMKDSYSFDIDWEGLDKSYNLHAEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDF 239 Y RIF + GLK + ++ G +G SHEF+ GE + V C I ++ Sbjct: 181 YHRIFTKCGLKYYQVESDPGIMGDMESHEFMAPTPAGEDEIVLCDSCGYSANIEVAKSEL 240 Query: 240 DDIISLN 246 + SLN Sbjct: 241 PTLPSLN 247 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/171 (39%), Positives = 101/171 (59%), Gaps = 9/171 (5%) Query: 257 AATSDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ K D P+ N + IEVG+IF GTKY+ P+ A F DGK+ + M Sbjct: 373 AQWADIRRVKEEDRCPKCGNSLKIEKAIEVGNIFKLGTKYTEPLHAYFLDKDGKEKPIIM 432 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 GSYGIG RV AA IE +HD GIIWP S++PF I +I + D+ E++Y ++++ Sbjct: 433 GSYGIGPARVAAAAIEQNHDSDGIIWPKSISPFDIEIIPLNMDDEKTVSIAEELYEKVTE 492 Query: 375 V-------GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +V DD E+ G +F ADL+G P+Q+++G K + ++KVEI Sbjct: 493 IYNSFADRHMEVLIDDRDERPGVKFKDADLIGIPIQIVIGKKGLKENKVEI 543 >gi|116669968|ref|YP_830901.1| prolyl-tRNA synthetase [Arthrobacter sp. FB24] gi|152074746|sp|A0JUT1|SYP_ARTS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116610077|gb|ABK02801.1| prolyl-tRNA synthetase [Arthrobacter sp. FB24] Length = 603 Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 110/271 (40%), Positives = 154/271 (56%), Gaps = 6/271 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R SK FL L+E+P DAE+ASH+L++R G I + + GIY+WLPLG L V +IREE Sbjct: 3 LRLSKLFLRTLREDPADAEVASHRLLVRAGYIRRAAPGIYTWLPLGLSVLRKVEKVIREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ P L + + + R+ YG+ + RL DR + PTHEE+ T + + Sbjct: 63 MAAIGAQEVHFPALLPKEPYEATNRWTEYGEGIFRLKDRKGGDYLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SYN + Sbjct: 123 LYSSYKDLPLSIYQIQNKYRDEARPRAGLLRGREFIMKDSYSFDVDDAGLDASYNAHRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF RLGL+ IP+ A +G +GG S EF+ + GE S + + T Sbjct: 183 YLKIFERLGLEVIPVAATAGAMGGSRSEEFLHPTEIGEDTFVRSAGGYAANVEAVTTVVP 242 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 I ++ AP A D N D+L Sbjct: 243 AEIDFSN------APAAEIRDTPNTPTIDTL 267 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 97/161 (60%), Gaps = 3/161 (1%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ ES+HD KG Sbjct: 437 TARGIEMGHIFQLGRKYAEALELKVLDQNGKQVVVTMGSYGVGVTRAVAALAESNHDAKG 496 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVAD 396 ++WP +VAP + ++ + +++ A E++ L G +V +DD + G +F A+ Sbjct: 497 LVWPRAVAPADVHVVAVGRGEEIFA-AAEQLSLELEAAGLEVIYDDRPKVSPGVKFGDAE 555 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 L+G P + VG V D VEIK R +G E++++E+ ++Y Sbjct: 556 LIGVPTILAVGRGLV-DGVVEIKDRRSGEAENVAVEKAVDY 595 >gi|84498663|ref|ZP_00997420.1| prolyl-tRNA synthetase [Janibacter sp. HTCC2649] gi|84381060|gb|EAP96946.1| prolyl-tRNA synthetase [Janibacter sp. HTCC2649] Length = 593 Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 105/271 (38%), Positives = 157/271 (57%), Gaps = 5/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S FL L+E+P DAE+ H+L++R G + + + GIY+WLPLG + L V AI+REE Sbjct: 1 MRMSSLFLRTLREDPVDAELPGHRLLVRAGYVRRAAPGIYTWLPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E++ P L + + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 61 MDAIGAQELTFPALLPREPYEATNRWTEYGDNIFRLKDRKGGDYLLGPTHEEMFTLAVKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD++ EG + SY + Sbjct: 121 MFSSYKDLPLSLYQIQNKYRDEARPRAGLLRGREFVMKDSYSFDVSDEGLEASYQAHRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF RLG + + + A SG +GG S EF+ ++ GE F D + E Sbjct: 181 YIKIFDRLGFEYVIVSAMSGAMGGSASEEFLAVSAIGE-DTFVRNDAGTYAANVEAV--- 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +++ + V+ P A D + D+L Sbjct: 237 -VVTQAAPVDASGVPAAHVEDTPDTPTIDTL 266 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/175 (34%), Positives = 97/175 (55%), Gaps = 9/175 (5%) Query: 269 DSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ V +ARGIE+GHIF G K++ + +GK V MGSYG+G R VA Sbjct: 410 DPSPDGNGVLHTARGIEMGHIFQLGRKFAEALDLKVLDENGKLVTVTMGSYGVGVSRAVA 469 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDD 383 A+ E + D G+IWP +V P + ++ + D ++I A L G V +DD Sbjct: 470 AIAEDNLDDLGLIWPRAVTPADVHVVATGKNRDRDGDVFAKADEITASLEAQGISVLYDD 529 Query: 384 MGEQI--GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E++ G +F ++L+G P V+VG K + + +EIK R +G R +++++ VI+ Sbjct: 530 R-EKVSPGVKFKDSELIGIPTIVVVG-KSLENGVIEIKDRRSGERREVAVDSVID 582 >gi|320547753|ref|ZP_08042037.1| proline--tRNA ligase [Streptococcus equinus ATCC 9812] gi|320447513|gb|EFW88272.1| proline--tRNA ligase [Streptococcus equinus ATCC 9812] Length = 618 Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++++ +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQTQMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTSLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF EG +Y + + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHADYEGLDETYEEYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 16/190 (8%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ K + P+ K V ARGIE+GHIF GT+YS M AT +G+ + MG YG Sbjct: 420 DIREVKEGEISPDGKGVLKFARGIEIGHIFKLGTRYSESMGATILDQNGRAVPIIMGCYG 479 Query: 319 IGAMRVVAAVIES------SHDGKG-------IIWPDSVAPFKISLINIKAHDQVCRDAC 365 IG R+++AVIE S KG I +P +APF + +I + D+ + Sbjct: 480 IGVSRILSAVIEQHARLFVSKTPKGAYRFAWGINFPKELAPFDVHVITVNVKDEEAQALT 539 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 K+ A L + G +V DD E++GS+F+ +DL+G P++V VG K +D VE+K + TG Sbjct: 540 AKVEAELVEKGYEVLVDDRNERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKATGD 598 Query: 426 REDMSLEEVI 435 +++ E +I Sbjct: 599 TIEVNAENLI 608 >gi|313891198|ref|ZP_07824817.1| proline--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] gi|313120561|gb|EFR43681.1| proline--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] Length = 617 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S GIY++LPL + ++ + I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGIYAYLPLANRTIEKLKGIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG+++ +L +R I GPTHEE T + R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRESSDFILGPTHEETFTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHQNDEDLDITYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL+ + + G +GG S EF+ + Sbjct: 181 YEAIFTRSGLEFKGIIGDGGAMGGKDSQEFMAI 213 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 93/159 (58%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS + AT +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEIGHIFKLGTRYSNSLGATILDENGRAVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P+ +APF + LI + DQ +D K+ L+ G +V DD Sbjct: 500 KTPKGDYRFAWGINFPEELAPFDVHLITVNTKDQEAQDLTSKVEKDLTAKGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P+++ VG K ++ VEIK + +G Sbjct: 560 ERVGSKFSDSDLIGLPIRITVGKK-AAEGIVEIKIKASG 597 >gi|332523321|ref|ZP_08399573.1| proline--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] gi|332314585|gb|EGJ27570.1| proline--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] Length = 617 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 96/214 (44%), Positives = 138/214 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S GIY++LPL + ++ + I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGIYAYLPLANRTIEKLKGIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG+++ +L +R I GPTHEE T + R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRESSDFILGPTHEETFTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHQNDEDLDITYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 Y IF R GL+ + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLEFKGIIGDGGAMGGKDSQEFMAIT 214 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS + AT +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEIGHIFKLGTRYSKSLGATILDENGRAVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P+ +APF + LI + DQ +D K+ L G +V DD Sbjct: 500 KTPKGDYRFAWGINFPEELAPFDVHLITVNTKDQDAQDLTSKVEHDLMTKGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P+++ VG K S+ VEIK + +G Sbjct: 560 ERVGSKFSDSDLIGLPIRITVGKK-ASEGIVEIKIKASG 597 >gi|325475063|gb|EGC78249.1| prolyl-tRNA synthetase [Treponema denticola F0402] Length = 595 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 95/224 (42%), Positives = 145/224 (64%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ ++P L+E P +A + SHKL+LR GMI + G++++LPLG KA V IIREE Sbjct: 1 MKMTQMYMPTLREIPNEAVVESHKLLLRAGMIRNLANGLFAYLPLGLKAFRKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G +E P + ++W ESGR+DS G E+LR+ +R ++ ++ PT EE T + ++ Sbjct: 61 MDAIGCLEFKPPVIVPGEIWQESGRWDSMGPELLRIKNRLNQELVVSPTAEEAFTALLKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+N P YQI K+RDE+RPR+G+MR+REF MKDAYSF + +Y + Sbjct: 121 ELSSYKNYPLLTYQINTKYRDEIRPRYGLMRTREFTMKDAYSFHTNDKSLDEAYLSFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFC 223 Y++IF R GL I ++A+SG +GG S EF+V + G +T + C Sbjct: 181 YIKIFKRCGLTVIGVKADSGAMGGSGSQEFMVESSVGDDTLLLC 224 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 90/144 (62%), Gaps = 3/144 (2%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + +G E+GHIF G KY+ M+ T+ +GK + MG YGIG R+ A+++E HD G Sbjct: 426 TKKGNELGHIFKLGYKYTKAMNMTYLDENGKQQHPSMGCYGIGLDRLTASIVEEHHDEDG 485 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP S+APF+++++ IK ++ ++A +++Y K G + DD E+ G +F DL Sbjct: 486 IIWPMSIAPFQVAIVPIKYEGEMQKEA-DRLYEECKKRGIEALLDDRKERTGVKFKDMDL 544 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 +G P++++VG K + + +E K R Sbjct: 545 IGIPIRLVVGEKNLPN--IEFKLR 566 >gi|289705162|ref|ZP_06501565.1| proline--tRNA ligase [Micrococcus luteus SK58] gi|289558106|gb|EFD51394.1| proline--tRNA ligase [Micrococcus luteus SK58] Length = 608 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 102/226 (45%), Positives = 141/226 (62%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+++P +AE+ASH+L++R G I + + GIYSWLPLG K L V I+REE Sbjct: 3 LRMSTLFLRTLRDDPAEAEVASHRLLVRAGYIRRAAPGIYSWLPLGLKVLAQVERIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ P L + + +GR+D YG + RL DR + PTHEE+ T + + Sbjct: 63 MDAIGAQEVHFPALLPREPYEATGRWDEYGDGLFRLQDRRGNDYLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF + G +Y + Sbjct: 123 LYSSYKDLPAYLYQIQTKYRDEARPRAGLLRGREFIMKDSYSFTVDDAGLDAAYEAHRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 YLRIF RLGL+ +P+RA SG +GG S EF+ + GE F D Sbjct: 183 YLRIFDRLGLEVVPVRATSGAMGGSRSEEFLHPTEVGE-DTFVESD 227 Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 5/147 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+GHIF G KY+ + GK V MGSYGIG R VAA+ E HD KG+ Sbjct: 443 RGMEMGHIFQLGRKYAEALDLKVLDVHGKQVVVTMGSYGIGITRAVAAIAERYHDDKGLA 502 Query: 340 WPDSVAPFKIS-LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP +VAP + ++ K D + A E + A L G V DD + G +F A+L Sbjct: 503 WPRAVAPADVHVVVATKGEDGLA--AAETLAAGLEAEGLTVLVDDRPKVSPGVKFKDAEL 560 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +G P V+VG + ++D ++E+K R TG Sbjct: 561 IGVPTAVVVG-RGLADGELELKDRATG 586 >gi|54026044|ref|YP_120286.1| prolyl-tRNA synthetase [Nocardia farcinica IFM 10152] gi|81822939|sp|Q5YSB9|SYP_NOCFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|54017552|dbj|BAD58922.1| putative prolyl-tRNA synthetase [Nocardia farcinica IFM 10152] Length = 585 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 139/223 (62%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ SHKL++R G + + + G+YSWLPLG + L V ++R E Sbjct: 4 RLSHLFLRTLRDDPADAEVPSHKLLVRAGYVRRVAPGVYSWLPLGLRVLRKVEDVVRAEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+S+P L D + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 NAIGGQEISLPALLPRDPYETTNRWTEYGDSLFRLHDRKGADYLLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKD+YSFDL +G K SYN +Y Sbjct: 124 YNSYKDLPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDLDEDGLKASYNAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF RLG+K + + A SG +GG S EF+ + GE T V C Sbjct: 184 QRIFDRLGVKYVIVAATSGAMGGSASEEFLADSPVGEDTYVIC 226 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 62/151 (41%), Positives = 89/151 (58%), Gaps = 2/151 (1%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIE+GHIF G KY+ G +GK + MGSYGIG R+VA + E HD KG Sbjct: 421 AARGIEIGHIFQLGYKYTDAFEVDVLGENGKPVRLIMGSYGIGVSRMVAVIAEQQHDEKG 480 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 + WP +VAPF + ++ + D+ R E++ A L G DV +DD G +F A+L Sbjct: 481 LRWPAAVAPFDVHVV-VANKDEAARTGAEQVVAGLDAQGLDVLFDDRTASPGVKFKDAEL 539 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 LG P V++G + +D VE+++R TG E+ Sbjct: 540 LGMPWVVVIGRGW-ADGTVELRNRFTGEAEN 569 >gi|322386937|ref|ZP_08060561.1| proline--tRNA ligase [Streptococcus cristatus ATCC 51100] gi|321269219|gb|EFX52155.1| proline--tRNA ligase [Streptococcus cristatus ATCC 51100] Length = 616 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|239917224|ref|YP_002956782.1| prolyl-tRNA synthetase, family II [Micrococcus luteus NCTC 2665] gi|281414302|ref|ZP_06246044.1| prolyl-tRNA synthetase [Micrococcus luteus NCTC 2665] gi|259511606|sp|C5C9S6|SYP_MICLC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|239838431|gb|ACS30228.1| prolyl-tRNA synthetase, family II [Micrococcus luteus NCTC 2665] Length = 608 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 102/226 (45%), Positives = 141/226 (62%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+++P +AE+ASH+L++R G I + + GIYSWLPLG K L V I+REE Sbjct: 3 LRMSTLFLRTLRDDPAEAEVASHRLLVRAGYIRRAAPGIYSWLPLGLKVLAKVERIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ P L + + +GR+D YG + RL DR + PTHEE+ T + + Sbjct: 63 MDAIGAQEVHFPALLPREPYEATGRWDEYGDGLFRLQDRRGNDYLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF + G +Y + Sbjct: 123 LYSSYKDLPAYLYQIQTKYRDEARPRAGLLRGREFIMKDSYSFTVDDAGLDAAYEAHRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 YLRIF RLGL+ +P+RA SG +GG S EF+ + GE F D Sbjct: 183 YLRIFDRLGLEVVPVRATSGAMGGSRSEEFLHPTEVGE-DTFVESD 227 Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 5/147 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+GHIF G KY+ + GK V MGSYGIG R VAA+ E HD KG+ Sbjct: 443 RGMEMGHIFQLGRKYAEALDLKVLDVHGKQVVVTMGSYGIGITRAVAAIAERYHDDKGLA 502 Query: 340 WPDSVAPFKIS-LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP +VAP + ++ K D + A E + A L G V DD + G +F A+L Sbjct: 503 WPRAVAPADVHVVVATKGEDGLA--AAETLAASLEAEGLTVLVDDRPKVSPGVKFKDAEL 560 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +G P V++G + ++D ++E+K R TG Sbjct: 561 IGVPTTVVIG-RGLADGELELKDRATG 586 >gi|210623134|ref|ZP_03293600.1| hypothetical protein CLOHIR_01550 [Clostridium hiranonis DSM 13275] gi|210153811|gb|EEA84817.1| hypothetical protein CLOHIR_01550 [Clostridium hiranonis DSM 13275] Length = 580 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 137/225 (60%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+P +E P D EI SHKLM+R+GMI + + GIY+ LPLG K + II+EE Sbjct: 17 MRFSKMFIPTKREIPTDVEIESHKLMIRSGMIKKSASGIYNQLPLGLKVERKIENIIKEE 76 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM L ++LW ESGR+ G EM RL DR K GPTHEEV TDI R Sbjct: 77 VEDADFREMLCSALIPSELWQESGRWARRGAEMFRLEDRTGKEFCLGPTHEEVFTDIVRQ 136 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE +PRFG +R++ F M DAYSFD E SY +M + Sbjct: 137 EVSSYKQLPVKLYQIQSKYRDEKKPRFGAIRTKSFTMFDAYSFDKDEESLNKSYEEMIAA 196 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCS 224 + RIF R G+K + AESG G S EF+V ++ GE ++ CS Sbjct: 197 FKRIFDRCGVKYSLVEAESGIEGAPSSIEFMVKSEIGEDELAICS 241 Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 93/151 (61%), Gaps = 1/151 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G K+S M+A ++ + D Y+ +G Y IG R+ A +IE + D GI+ Sbjct: 418 RGIEIGHIFKAGQKFSENMNAMYRSEEETDEYIHLGCYEIGTERLTATIIEQNFDADGIV 477 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP SVAPF++ +I + ++ + E+IY L +G DV DD + G++F +DL+G Sbjct: 478 WPLSVAPFEVEIIPVNLKNEDVVNTAERIYKELKLMGVDVLIDDRDARPGTKFKDSDLIG 537 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 P+++ VG + + + VE+K R + RE +S Sbjct: 538 IPVRITVG-RDLKEGLVEMKFRNSEERELIS 567 >gi|24380149|ref|NP_722104.1| prolyl-tRNA synthetase [Streptococcus mutans UA159] gi|81845206|sp|Q8DSJ9|SYP_STRMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|24378150|gb|AAN59410.1|AE015006_3 putative prolyl-tRNA synthetase [Streptococcus mutans UA159] Length = 616 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 138/214 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S +P L+E P DA++ SH LM+R G + Q S GIYS+LPL + ++ + I+REE Sbjct: 1 MKQSNMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYSYLPLAHRVIEKIKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY +YG+++ +L +R+ I GPTHEE T++ R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYGTYGEDLYKLKNRDQSDFILGPTHEETFTNLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHADYDSLDATYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 Y IF R+GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRVGLDFKAIIGDGGAMGGKDSQEFMAVT 214 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/174 (36%), Positives = 96/174 (55%), Gaps = 14/174 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD---- 334 ARGIE+GHIF GT+YS M A +G+ + MGSYGIG R+++AVIE + Sbjct: 440 ARGIEIGHIFKLGTRYSESMGANILDENGRSIPIIMGSYGIGVSRILSAVIEQNARIFVN 499 Query: 335 ---------GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 G+ +P ++APF + LI + D+V + K+ L V D+ Sbjct: 500 KTPKGAYRFSWGVNFPKTLAPFDVHLITVNVKDEVSQQLTAKVEESLVDAHYSVLTDNRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 E+IGS+F+ +DL+G P++V VG K SD VE+K + TG +++ E ++ S Sbjct: 560 ERIGSKFSDSDLIGLPIRVTVGKK-ASDGIVEVKIKSTGDTIEVNAENLLETLS 612 >gi|42527722|ref|NP_972820.1| prolyl-tRNA synthetase [Treponema denticola ATCC 35405] gi|81831353|sp|Q73KJ8|SYP_TREDE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|41818550|gb|AAS12739.1| prolyl-tRNA synthetase [Treponema denticola ATCC 35405] Length = 595 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 95/224 (42%), Positives = 145/224 (64%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ ++P L+E P +A + SHKL+LR GMI + G++++LPLG KA V IIREE Sbjct: 1 MKMTQMYMPTLREIPNEAVVESHKLLLRAGMIRNLANGLFAYLPLGLKAFRKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G +E P + ++W ESGR+DS G E+LR+ +R ++ ++ PT EE T + ++ Sbjct: 61 MDAIGCLEFKPPVIVPGEIWQESGRWDSMGPELLRIKNRLNQELVVSPTAEEAFTALLKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+N P YQI K+RDE+RPR+G+MR+REF MKDAYSF + +Y + Sbjct: 121 ELSSYKNYPLLTYQINTKYRDEIRPRYGLMRTREFTMKDAYSFHTNDKSLDEAYLSFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFC 223 Y++IF R GL I ++A+SG +GG S EF+V + G +T + C Sbjct: 181 YIKIFKRCGLTVIGVKADSGAMGGSGSQEFMVESSVGDDTLLLC 224 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 90/144 (62%), Gaps = 3/144 (2%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + +G E+GHIF G KY+ M+ T+ +GK + MG YGIG R+ A+++E HD G Sbjct: 426 TKKGNELGHIFKLGYKYTKAMNMTYLDENGKQQHPSMGCYGIGLDRLTASIVEEHHDEDG 485 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP S+APF+++++ IK ++ ++A +++Y K G + DD E+ G +F DL Sbjct: 486 IIWPMSIAPFQVAIVPIKYEGEMQKEA-DRLYEECKKRGIEALLDDRKERTGVKFKDMDL 544 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 +G P++++VG K + + +E K R Sbjct: 545 IGIPIRLVVGEKNLPN--IEFKLR 566 >gi|227486766|ref|ZP_03917082.1| proline--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227235236|gb|EEI85251.1| proline--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 563 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 96/219 (43%), Positives = 144/219 (65%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +P L+E+P DAE ASHKL++R I Q + GIYS+LPLG+K L+ + AI+R+ + GAI Sbjct: 1 MPTLREDPVDAETASHKLLVRGAFIRQQASGIYSFLPLGKKVLNKIEAIVRDAMDSYGAI 60 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E++ LQ +W +S R++++G EM +L DR+++ GPT EE D+ + + SY+ Sbjct: 61 EVATSILQPRQIWDKSTRWETFGPEMFKLKDRHEREYALGPTAEEAFVDLIKDELNSYKQ 120 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP YQI KFRDE RPRFG+ RSR+FLMKDAY+FD G + +Y M+ SY F + Sbjct: 121 LPVNLYQIVDKFRDEKRPRFGINRSRDFLMKDAYTFDEDQAGLEKAYMNMWESYEYAFDK 180 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + L + ++G +GG SHEFI L+++GE + +++ Sbjct: 181 MKLDYKIVEGDTGAMGGHKSHEFIALSESGEGVILYTEN 219 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 72/159 (45%), Positives = 94/159 (59%), Gaps = 1/159 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIEVG+IF GTKYS + ATF +G Y +MGSYGIG R ++A++E HD KG Sbjct: 394 SARGIEVGNIFQLGTKYSKALDATFLDQNGVSKYFEMGSYGIGISRSISAIVEQYHDDKG 453 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP SVAPF++ + IK +D+ E IY +L DV DD E+ G +F DL Sbjct: 454 IIWPTSVAPFEVIITLIKPNDEDQAKLAEDIYKKLKARRIDVVLDDRKERPGVKFNDRDL 513 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +G P ++ VG K DS VE R +++ E IN Sbjct: 514 IGIPYRITVG-KDAKDSIVEYSTRAEMENKNIDANEAIN 551 >gi|300933077|ref|ZP_07148333.1| prolyl-tRNA synthetase [Corynebacterium resistens DSM 45100] Length = 592 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 98/217 (45%), Positives = 139/217 (64%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ SHKL++R G I + + G+YSWLPLG + L V ++R E Sbjct: 4 RMSTLFLRTLRDDPADAEVPSHKLLVRAGYIRRAAPGVYSWLPLGLRVLRKVENVVRNEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+S P L + + +GR+ YG +LRL DR + GPTHEE+ T + + Sbjct: 64 DAIGAQELSFPALLPREPYETTGRWTEYGDALLRLKDRKGADYLLGPTHEEMFTSVVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+ EG + SY+K +Y Sbjct: 124 YNSYKDFPVTLYQIQNKYRDEERPRAGILRGREFIMKDSYSFDMDDEGLERSYHKHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 +IF LG++ A SG +GG S EF+ +A+ GE Sbjct: 184 QKIFDTLGVQYAICAATSGAMGGSASEEFLAVAENGE 220 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 63/166 (37%), Positives = 96/166 (57%), Gaps = 3/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ +GK MGSYGIG R+VA + E HD G+ Sbjct: 428 ARGIEIGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSYGIGVSRLVAVLAEQMHDEYGL 487 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP +VAP+ + ++ I D +A EK+ LS G DV DD + G +F ++L Sbjct: 488 RWPVAVAPYDVHVV-IANKDAAAAEAAEKLTTELSSTGLDVLIDDRPKVSPGVKFKDSEL 546 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 LG PL V+VG F ++ KVE+++RL+G + +++ E+ ++ + + Sbjct: 547 LGMPLVVVVGRGF-AEGKVELRNRLSGDKLEVAYEDAVSAVQQQLT 591 >gi|149017957|ref|ZP_01834416.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|147931521|gb|EDK82499.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] Length = 617 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMSSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM PTL SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPTLLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y RIF R GL + + G +GG S EF+ + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 597 >gi|182414610|ref|YP_001819676.1| prolyl-tRNA synthetase [Opitutus terrae PB90-1] gi|177841824|gb|ACB76076.1| prolyl-tRNA synthetase [Opitutus terrae PB90-1] Length = 590 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 96/226 (42%), Positives = 148/226 (65%), Gaps = 7/226 (3%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+YF+P L+E+P DAEIASHKL++R G++ + G+Y++LPLG + + + + REE R Sbjct: 5 SQYFVPTLKESPADAEIASHKLLIRAGLVRKLGGGLYTYLPLGLRVMQKLTQLCREELER 64 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-------KAMIYGPTHEEVMTD 116 GAIE+ +P + +LW + R+ + + M R D + GPTHEE++T Sbjct: 65 AGAIELWMPHVHPVELWQQGPRWAAAREIMFRADSAGDGKHGPREPEFVLGPTHEEIVTP 124 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + ++ I SYR+LP F+QI KFR+E+RPRFG+MR+REF+M DAYSFD+ + + SY Sbjct: 125 LVKAEITSYRDLPKNFFQIATKFRNEIRPRFGLMRAREFVMMDAYSFDVDDDRAIKSYQA 184 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 M +Y F R+G+++I + A++G +GG SHEF+V A+ G+ V Sbjct: 185 MKAAYEAFFRRIGVQAIAVEADTGVMGGSFSHEFMVPAEVGDDDVI 230 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/142 (42%), Positives = 81/142 (57%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS A + + H + MGSYGIG R + A+IE SHD GI+ Sbjct: 419 RGIEVGHIFKLGTKYSEKSGAVYTDDQKQSHLMVMGSYGIGISRTLQAIIEQSHDADGIV 478 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP + APF + + + D K+ A K G +V DD E+ G +F ADL+G Sbjct: 479 WPWNSAPFHVLICVLDPQLAEAVDLARKLAAAAEKAGAEVLVDDRAERPGVKFKDADLVG 538 Query: 400 FPLQVIVGSKFVSDSKVEIKHR 421 PL++ +G K + + VE+K R Sbjct: 539 IPLRLTIGGKGLKEGVVELKWR 560 >gi|260773310|ref|ZP_05882226.1| prolyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] gi|260612449|gb|EEX37652.1| prolyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] Length = 548 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 96/193 (49%), Positives = 131/193 (67%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+R+E + GAIE +P +Q +LW E+GR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFELWEETGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 + G E+LR DR+ + + PT EEV+T + R+ + SY+ LP YQIQ KFRDE RP Sbjct: 61 SEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMR+REF M DAYSFD+ +G + SY M +Y + F R+GL P+ A++G IGG+ Sbjct: 121 RFGVMRAREFSMMDAYSFDIDKDGLEKSYQAMHDAYCKAFDRMGLDYRPVLADTGAIGGN 180 Query: 206 LSHEFIVLADTGE 218 SHEF VLA++GE Sbjct: 181 GSHEFHVLAESGE 193 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 103/167 (61%), Gaps = 1/167 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK ++MG YGIG RVVA+ IE +HD GII Sbjct: 382 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKHTILEMGCYGIGVSRVVASAIEQNHDKYGII 441 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A E +YA L+ G +V +DD E+ G F+ +L+ Sbjct: 442 WPDALAPFQVAIVPMNMHKSERVQQAAETLYAELTAAGIEVLFDDRKERPGVMFSDMELI 501 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G P +I+G + + + E KHR +G + + + ++++ + ++ Sbjct: 502 GIPHTIIIGDRSMDEGNFEYKHRRSGEKSAVPMANMVSFIHEQLGDS 548 >gi|297202727|ref|ZP_06920124.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] gi|197713306|gb|EDY57340.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] Length = 567 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 106/254 (41%), Positives = 148/254 (58%), Gaps = 8/254 (3%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + GI+SWLPLG+K L NV I+REE Sbjct: 8 RMSQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGIWSWLPLGKKVLANVERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P + + + +GR+D YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVLLPAILPREPYEATGRWDEYGPELFRLQDRKGGDYLLGPTHEEIFTLLVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REFLMKD+YSFD EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQHKYRDEARPRAGILRGREFLMKDSYSFDTEDEGLARSYALHRQAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN----- 236 ++F RLGL A +G +GG S EF+ A+ GE F DF +E Sbjct: 188 QKVFERLGLDYRICAATAGAMGGSKSEEFLAPAEAGE-DTFADCPNCDFAANTEAITYEL 246 Query: 237 --TDFDDIISLNSI 248 D D + +L I Sbjct: 247 KPVDADGVAALEEI 260 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 56/157 (35%), Positives = 88/157 (56%), Gaps = 4/157 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ + G +GK V MGSYGIG R VAA+ E + D KG+ Sbjct: 409 RAIEIGHIFQLGRKYADALKLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLC 468 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP VAP + ++ Q+ + + +L + G V DD G G +F ++L+ Sbjct: 469 WPAEVAPADVHVVAAGKALQI--ELALDVSEKLREAGLRVLVDDRAGVSPGVKFTDSELI 526 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P +++V + ++ +E+K R TG RE+++++E I Sbjct: 527 GVP-KILVAGRRSAEGVLELKDRRTGEREELTVDEAI 562 >gi|145295898|ref|YP_001138719.1| prolyl-tRNA synthetase [Corynebacterium glutamicum R] gi|166980117|sp|A4QF01|SYP_CORGB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|140845818|dbj|BAF54817.1| hypothetical protein [Corynebacterium glutamicum R] Length = 588 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 99/217 (45%), Positives = 137/217 (63%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + GIYSWLPLG +A+ N+ A++REE Sbjct: 4 RLSTLFLRTLREDPADAEVPSHKLLVRAGYIRRVAPGIYSWLPLGLRAVRNIEAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L + + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DAIGGQELLFPALLPREPYETTQRWTEYGDSLFRLKDRKGADYLLGPTHEEMFAATVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF+MKD+YSFD++ G SY K +Y Sbjct: 124 YNSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFVMKDSYSFDMSDAGLDESYAKHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RLGL+ +A SG +GG S EF+ +++ GE Sbjct: 184 QRIFDRLGLEYAICQATSGAMGGSASEEFLAVSENGE 220 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 3/144 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ +GK MGSYG+G R++A + E HD G+ Sbjct: 422 ARGIEIGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGLGVTRLLAVLAEQRHDDAGL 481 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 W VAP+++ ++ D +A E+ A LS G DV +DD + G +F A+L Sbjct: 482 NWSVEVAPYQVHVVAAN-KDAAAIEAAERFAAELSAAGLDVLFDDRPKVSPGVKFKDAEL 540 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 LG P +I+G + ++ KVE++ R Sbjct: 541 LGMPFALILGRGY-AEGKVELRVR 563 >gi|302554518|ref|ZP_07306860.1| prolyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302472136|gb|EFL35229.1| prolyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] Length = 566 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 104/238 (43%), Positives = 143/238 (60%), Gaps = 10/238 (4%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + GI+SWLPLG+K L NV I+REE Sbjct: 8 RMSQLLAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGIWSWLPLGKKVLANVERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P + + + +GR++ YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAVGAQEVLLPAILPREPYEATGRWEEYGPELFRLQDRKGGDYLLGPTHEEIFTLLVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REFLMKD+YSFD EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQNKYRDEARPRAGILRGREFLMKDSYSFDTDDEGLAQSYALHREAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +IF RLGL A +G +GG S EF+ A+ GE F D P N DF Sbjct: 188 QKIFARLGLDYRICAATAGAMGGSKSEEFLAPAEAGEDT------FADCP----NCDF 235 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 4/157 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IE+GHIF G KY+ + G +GK V MGSYGIG R VAA+ E S D KG+ Sbjct: 408 RAIEIGHIFQLGRKYADALKLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQSADDKGLC 467 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP VAP + + + A + + I +L+ G V DD G G +F ++L+ Sbjct: 468 WPKEVAPADVHV--VAAGKALQTELALDISGKLAAAGVRVLVDDRAGVSPGVKFTDSELI 525 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P Q++V + +D VE+K R TG RE++++EE + Sbjct: 526 GVP-QILVAGRRAADGVVELKDRRTGEREELTVEEAV 561 >gi|19746872|ref|NP_608008.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS8232] gi|81847886|sp|Q8NZB4|SYP_STRP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|19749114|gb|AAL98507.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes MGAS8232] Length = 618 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R+ Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 99/170 (58%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIEVGHIF GT+YS M AT +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEVGHIFKLGTRYSDSMGATILDENGRAVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + DQV +D K+ A L G DV DD Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P++V VG K ++ VEIK + TG +++ E +I Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLI 608 >gi|19553198|ref|NP_601200.1| prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|62390834|ref|YP_226236.1| prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|81847611|sp|Q8NP31|SYP_CORGL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|21324764|dbj|BAB99387.1| Prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|41326172|emb|CAF20335.1| PROBABLE PROLYL-TRNA SYNTHETASE PROTEIN [Corynebacterium glutamicum ATCC 13032] Length = 588 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 99/217 (45%), Positives = 137/217 (63%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + GIYSWLPLG +A+ N+ A++REE Sbjct: 4 RLSTLFLRTLREDPADAEVPSHKLLVRAGYIRRVAPGIYSWLPLGLRAVRNIEAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L + + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DAIGGQELLFPALLPREPYETTQRWTEYGDSLFRLKDRKGADYLLGPTHEEMFAATVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF+MKD+YSFD++ G SY K +Y Sbjct: 124 YNSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFVMKDSYSFDISDAGLDESYAKHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RLGL+ +A SG +GG S EF+ +++ GE Sbjct: 184 QRIFDRLGLEYAICQATSGAMGGSASEEFLAVSENGE 220 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 3/144 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ +GK MGSYG+G R++A + E HD G+ Sbjct: 422 ARGIEIGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGLGVTRLLAVLAEQRHDDAGL 481 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 W VAP+++ ++ D +A E+ A LS G DV +DD + G +F A+L Sbjct: 482 NWSVEVAPYQVHVVAAN-KDAAAIEAAERFAAELSAAGLDVLFDDRPKVSPGVKFKDAEL 540 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 LG P +I+G + ++ KVE++ R Sbjct: 541 LGMPFALILGRGY-AEGKVELRVR 563 >gi|21911224|ref|NP_665492.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28896602|ref|NP_802952.1| prolyl-tRNA synthetase [Streptococcus pyogenes SSI-1] gi|81847409|sp|Q8K5S7|SYP_STRP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|21905437|gb|AAM80295.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28811856|dbj|BAC64785.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes SSI-1] Length = 618 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R+ Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 99/170 (58%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIEVGHIF GT+YS M AT +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEVGHIFKLGTRYSDSMGATILDENGRTVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + DQV +D K+ A L G DV DD Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P++V VG K ++ VEIK + TG +++ E +I Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLI 608 >gi|319948036|ref|ZP_08022210.1| prolyl-tRNA synthetase [Dietzia cinnamea P4] gi|319438275|gb|EFV93221.1| prolyl-tRNA synthetase [Dietzia cinnamea P4] Length = 581 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 101/225 (44%), Positives = 140/225 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ SHKL++R G I + + G+YSWLPLG + L V ++REE Sbjct: 4 RLSHLFLRTLRDDPSDAEVLSHKLLVRAGYIRRVAPGVYSWLPLGLRTLRRVEQVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+S+P L + + +GR+ YG + RL DR M+ GPTHEE+ T + Sbjct: 64 DAFGAQEISLPALLPREPYETTGRWTEYGPALFRLKDRKGNDMMLGPTHEELFTLTVQGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY +Y Sbjct: 124 YSSYKDLPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDVDDAGLGRSYRAHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 RIF RLG++ + A SG +GG S EF+ ++ GE S D Sbjct: 184 QRIFDRLGIEYVICAATSGAMGGSASEEFLAVSAAGEDTFVRSTD 228 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 6/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ G +GK V MGSYGIG R+VA + E D KG+ Sbjct: 418 ARGIEIGHIFQLGRKYTDAFGFDVLGENGKPARVTMGSYGIGVSRLVAVLAEQFADDKGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP AP + ++ I DQ D + + +V +DD G +F A+L+ Sbjct: 478 VWPAEAAPADVHVV-IANKDQAAIDGAATLVEAFDRARLEVLFDDRKASPGVKFKDAELI 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEVI 435 G P V+VG + S+ VE++HR TG + D + EE+I Sbjct: 537 GVPWVVVVGRGW-SEGTVELRHRATGDVTQVAVDGAAEEII 576 >gi|163839404|ref|YP_001623809.1| prolyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] gi|162952880|gb|ABY22395.1| prolyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] Length = 619 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 119/311 (38%), Positives = 166/311 (53%), Gaps = 26/311 (8%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DAEIASHKLM+R G I + + GIYSWLPLG + L V AIIREE Sbjct: 16 LRLSTLFLRTLREDPVDAEIASHKLMVRAGYIRRAAPGIYSWLPLGLRVLGKVEAIIREE 75 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G+ E+ P L + + + R+ YG + RL DR + PTHEE+ T + + Sbjct: 76 MAAIGSQEVHFPALLPCEPYEATNRWTEYGDGIFRLKDRKGNDYLLAPTHEEMFTLLVKD 135 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + +QIQ K+RDE RPR G+MR REF+MKD+YSFD+ G SY + Sbjct: 136 LYGSYKDLPVSLFQIQNKYRDEARPRAGLMRGREFIMKDSYSFDIDDAGLDISYEAHRAA 195 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE------------------TQVF 222 Y +IF RL L+ + ++A +G +GG S EF+ GE T V Sbjct: 196 YFKIFERLSLEVVAVKATAGAMGGSKSEEFLHPTPVGEDTYVRSAGGYAANVEAVSTVVP 255 Query: 223 CSKDFMDFP------IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE--N 274 DF D P+ T + + NS+V + AP+ A + N L LP + Sbjct: 256 ADIDFADLADAMVHDTPNTPTIETLVAAANSMVPRADAPWTAADTLKNVVLAVDLPAVGD 315 Query: 275 KRVSARGIEVG 285 K+ R + +G Sbjct: 316 KKAERRLVVIG 326 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/147 (39%), Positives = 83/147 (56%), Gaps = 3/147 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE GH+F G KY+ +GK V MGSYG+G R VAA+ E ++D +G+ Sbjct: 453 ARGIETGHVFQLGRKYAEIFDLKVLDQNGKQVVVTMGSYGVGVTRAVAAIAEGNNDDRGL 512 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 +WP +VAP + ++ + D + EK+ A L G DV DD + G +F A+L Sbjct: 513 VWPIAVAPADVHVVAV-GRDSEVFETAEKLAADLEAAGLDVILDDRQKVSPGVKFGDAEL 571 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +G P+ + VG V D VE+K+R TG Sbjct: 572 IGVPMVLAVGRGLV-DGVVELKNRRTG 597 >gi|164658475|ref|XP_001730363.1| hypothetical protein MGL_2745 [Malassezia globosa CBS 7966] gi|159104258|gb|EDP43149.1| hypothetical protein MGL_2745 [Malassezia globosa CBS 7966] Length = 509 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 146/476 (30%), Positives = 230/476 (48%), Gaps = 61/476 (12%) Query: 2 RRSKYFLPILQENPRDA--EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 R S+ ++P + + + + S + +LR G I Q + G Y++LP+G + L + AII + Sbjct: 24 RLSRLYVPTVSADALGSLDTLESVRRLLRGGYIRQSASGTYTYLPIGLRMLKKLTAIIED 83 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E ++ A ++ +P L S LW ++GR+++ G E+ RL DR MI PTHEE +T + Sbjct: 84 EMHQISASQLELPQLLSPALWHKTGRFEAMGSELFRLKDRRGNDMILAPTHEEEITKLVG 143 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 I S ++LP +QI KFRDE RPR G++R++EFLMKD YSFD++ E ++ +Y + Sbjct: 144 MEIDSAKSLPVRVFQIGRKFRDEPRPRAGLLRTKEFLMKDMYSFDVSVEDARITYEDVLC 203 Query: 180 SYLRIFHRL-------GLKSIPMR--AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 +Y RIF R+ ++ MR A+SG +GG LSHEF V GE + S D + Sbjct: 204 AYERIFQRVFCWDQARSSETTWMRATADSGTMGGKLSHEFHVPDPAGEDTLL-SCDQCSY 262 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK----LFDSLPENKRVSARGIEVGH 286 + N + + + E+ + V N S + IEVGH Sbjct: 263 ---TSNVECAKSLGRGTKQEEQGHQHGRDETVTNAARAGDRCASCTHGTLREHKAIEVGH 319 Query: 287 IFYFGTKYS--LPMSATFKGADGKDHY---VQMGSYGIGAMRVVAAVIESS-------HD 334 F GT+YS L + AD K +QMG YGIG RV+ A+ + + H Sbjct: 320 TFLLGTRYSEALGYHVVPRHADPKRPERVPLQMGCYGIGITRVLGALAQRAAREFDAWHA 379 Query: 335 GK----------------GIIWPDSVAPFK-ISLINIKAHDQVCRDACEKIYARLSKVGC 377 G WP +APF+ + L + H + C ++ L+ Sbjct: 380 ATAQTSSMPLQRRRPQRVGFFWPCEIAPFRALVLPSTPQHMDIAMRLCTQLDGGLAVTWA 439 Query: 378 ------------DVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 DV DD Q +GS+ +DL+G+P+ +I+G + +VE++ Sbjct: 440 DGMQELLHVPNEDVALDDRTHQSLGSRLFDSDLMGYPIVLILGKHYDQTGEVEVRQ 495 >gi|157736649|ref|YP_001489332.1| prolyl-tRNA synthetase [Arcobacter butzleri RM4018] gi|166980098|sp|A8ERT9|SYP_ARCB4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157698503|gb|ABV66663.1| prolyl-tRNA synthetase [Arcobacter butzleri RM4018] Length = 568 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 140/224 (62%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F+P +E P DA + SH+ ++R G I Q GIY ++PLG+ L+ + AI++EE Sbjct: 1 MKFSKMFIPTTKETPNDATLPSHQYLVRGGFIAQTGAGIYDFMPLGKIVLEKIRAIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ + LW ESGR + G EMLR DR + + PT+EE + ++ ++ Sbjct: 61 MDEAGANEVQFGFVTPLTLWQESGRATTMGAEMLRFKDRKNGEFVLSPTNEEAVVNMVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP YQI KFRDE RPRFG+MR REFLMKD YSF + E +N M + Sbjct: 121 RITSYKDLPLHLYQINTKFRDEARPRFGLMRGREFLMKDGYSFHSSEEDLVREFNLMETT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y +I+ +LGL + A+SG IGG S EF V+AD+GE T V C Sbjct: 181 YKKIYTKLGLDFRVVAADSGAIGGSGSKEFHVIADSGEDTLVVC 224 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 93/159 (58%), Gaps = 2/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIE GHIF GTKYS M+A F +GK MG YGIG R+VAAVIE +HD KG Sbjct: 404 TKGIEAGHIFQLGTKYSSAMNANFLDENGKAKPFIMGCYGIGVSRLVAAVIEQNHDDKGC 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADL 397 IW + APF + +I + + E++Y++L + G DD + + G + + +L Sbjct: 464 IWTKATAPFMVDIIVSNSKKEEEAKVGEELYSKLKQAGISTILDDRINARFGFKMSDFEL 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 LGFP V++G K + D VEI R T + D+ ++EVI+ Sbjct: 524 LGFPYAVVIGKK-LEDGLVEIVDRKTLEKIDVKVDEVIS 561 >gi|303557|dbj|BAA03654.1| DrpA protein [Escherichia coli W3110] Length = 155 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 91/155 (58%), Positives = 116/155 (74%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREF 155 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREF Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREF 155 >gi|56808720|ref|ZP_00366440.1| COG0442: Prolyl-tRNA synthetase [Streptococcus pyogenes M49 591] gi|94995163|ref|YP_603261.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] gi|209560100|ref|YP_002286572.1| prolyl-tRNA synthetase [Streptococcus pyogenes NZ131] gi|114152263|sp|Q1J4L9|SYP_STRPF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701346|sp|B5XIL5|SYP_STRPZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|94548671|gb|ABF38717.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] gi|209541301|gb|ACI61877.1| Prolyl-tRNA synthetase [Streptococcus pyogenes NZ131] Length = 618 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 137/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 99/170 (58%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIEVGHIF GT+YS M AT +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEVGHIFKLGTRYSDSMGATILDENGRTVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + DQV +D K+ A L G DV DD Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P++V VG K ++ VEIK + TG +++ E +I Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLI 608 >gi|258652410|ref|YP_003201566.1| prolyl-tRNA synthetase [Nakamurella multipartita DSM 44233] gi|258555635|gb|ACV78577.1| prolyl-tRNA synthetase [Nakamurella multipartita DSM 44233] Length = 585 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 100/217 (46%), Positives = 137/217 (63%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SH+L++R G I + + GIY+WLPLG + L NV I+REE Sbjct: 4 RLSTLFLRTLREDPADAEVPSHRLLVRAGYIRRAAPGIYTWLPLGYRVLRNVERIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + +GR+ YG + RL DR + GPTHEE+ T + + Sbjct: 64 DAIGAQEVHFPALLPREPYEATGRWTEYGDNLFRLQDRKQGDYLLGPTHEEMFTLLVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY+ LP + YQIQ K+RDE RPR G++R REF+MKD+YSFDL G SY + +Y Sbjct: 124 YSSYKGLPLSLYQIQTKYRDEARPRAGILRGREFVMKDSYSFDLDDAGLAASYQRHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 +RIF RLGL+ + + A SG +GG S EF+ GE Sbjct: 184 IRIFDRLGLRYVIVAAMSGAMGGSASEEFLADCVNGE 220 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 2/164 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYGIG R VAA+ ESS+D KG+ Sbjct: 422 ARGIEMGHIFQLGRKYAQALGLQVLDENGKLVTVTMGSYGIGVSRAVAAIAESSYDDKGL 481 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP VAP + ++ I D E I A L G V DD +G +FA A+L+ Sbjct: 482 IWPREVAPADVHVV-IAGKSAEIVDTAELIAAGLDAAGITVMLDDRNASVGVKFADAELI 540 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P +VG + V++ VE++ R +G + ++ L EV+ R Sbjct: 541 GVPTICVVG-RGVANGVVEVRDRASGDKTEVPLVEVVEQLRARV 583 >gi|94989304|ref|YP_597405.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94993193|ref|YP_601292.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] gi|114152260|sp|Q1J9R3|SYP_STRPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152261|sp|Q1JJW2|SYP_STRPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|94542812|gb|ABF32861.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94546701|gb|ABF36748.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] Length = 618 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 137/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 100/170 (58%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIEVGHIF GT+YS M AT +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEVGHIFKLGTRYSDSMGATILDENGRAVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G G+ +P +APF + LI + DQV +D K+ A L+ G DV DD Sbjct: 500 KTPKGDYRYAWGVNFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLTAKGYDVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P++V VG K ++ VEIK + TG +++ E +I Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGASIEVNAENLI 608 >gi|332365812|gb|EGJ43569.1| proline--tRNA ligase [Streptococcus sanguinis SK355] Length = 616 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVHD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R L + + G +GG S EF+ + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSESMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ ++I A L G +V DD Sbjct: 500 KTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 >gi|15675760|ref|NP_269934.1| prolyl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|71911486|ref|YP_283036.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] gi|81856026|sp|Q99XY4|SYP_STRP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|13622982|gb|AAK34655.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|71854268|gb|AAZ52291.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] Length = 618 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 137/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 99/170 (58%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIEVGHIF GT+YS M AT +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEVGHIFKLGTRYSDSMGATILDENGRTVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + DQV +D K+ A L G DV DD Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P++V VG K ++ VEIK + TG +++ E +I Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLI 608 >gi|50915027|ref|YP_060999.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] gi|139474448|ref|YP_001129164.1| prolyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] gi|81822684|sp|Q5X9U7|SYP_STRP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152112957|sp|A2RGI4|SYP_STRPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|50904101|gb|AAT87816.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] gi|134272695|emb|CAM30966.1| prolyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] Length = 618 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 137/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 97/170 (57%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIEVGHIF GT+YS M A +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEVGHIFKLGTRYSDSMGAKILDENGRAVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + DQ +D K+ A L G DV DD Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQAAQDLTAKLEADLMAKGYDVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P++V VG K ++ VEIK + TG +++ E +I Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLI 608 >gi|94991250|ref|YP_599350.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] gi|114152262|sp|Q1JEV3|SYP_STRPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|94544758|gb|ABF34806.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] Length = 618 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 137/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 98/170 (57%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIEVGHIF GT+YS M AT + + + MG YGIG R+++AVIE Sbjct: 440 ARGIEVGHIFKLGTRYSDSMGATILDENSRAVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + DQV +D K+ A L G DV DD Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P++V VG K ++ VEIK + TG +++ E +I Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLI 608 >gi|315222088|ref|ZP_07863998.1| prolyl-tRNA synthetase [Streptococcus anginosus F0211] gi|315188838|gb|EFU22543.1| prolyl-tRNA synthetase [Streptococcus anginosus F0211] Length = 619 Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 96/214 (44%), Positives = 137/214 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQISAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREGSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 Y IF R ++ + + G +GG S EF+ + Sbjct: 181 YENIFTRSEIEFKGIIGDGGAMGGKDSQEFMAIT 214 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+AT +G+ V MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSESMNATVLDENGRAVPVVMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + D+ E++ A L K G +V DD Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLIPVNVKDEEALVLTEQLEAELVKAGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+ G +F+ +DL+G P++V VG K +D VE+K + TG Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AADRIVEVKIKATG 597 >gi|325962798|ref|YP_004240704.1| prolyl-tRNA synthetase, family II [Arthrobacter phenanthrenivorans Sphe3] gi|323468885|gb|ADX72570.1| prolyl-tRNA synthetase, family II [Arthrobacter phenanthrenivorans Sphe3] Length = 603 Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 101/217 (46%), Positives = 138/217 (63%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ASH+L++R G I + + GIY+WLPLG L V A+IREE Sbjct: 4 RLSQLFLRTLREDPVDAEVASHRLLVRAGYIRRAAPGIYTWLPLGLSVLRKVEAVIREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+ P L + + + R+ YG+ + RL DR + PTHEE+ T + + Sbjct: 64 AAIGAQEVHFPALLPREPYEATNRWTEYGEGLFRLQDRKGADYLLAPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY +Y Sbjct: 124 YSSYKDLPLSLYQIQNKYRDEARPRAGLLRGREFIMKDSYSFDVDDAGLDASYAAHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 LRIF RLGL+ IP+ A +G +GG S EF+ D GE Sbjct: 184 LRIFERLGLEVIPVTATAGAMGGSKSEEFLHPTDIGE 220 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 96/160 (60%), Gaps = 3/160 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ ES+HD +G+ Sbjct: 438 ARGIEMGHIFQLGRKYAEALELKVLDQNGKQVTVTMGSYGVGVTRAVAALAESNHDARGL 497 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 +WP +VAP + ++ + +++ A E++ A L G DV DD + G +F A+L Sbjct: 498 VWPRAVAPADVHVVAVGKGEEIFATA-ERLAAELEAAGLDVLLDDRPKVSPGVKFGDAEL 556 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +G P + VG V D VEIK R +G E++++++ ++Y Sbjct: 557 VGVPTILAVGRGLV-DGVVEIKDRRSGEAENVAVDKAVDY 595 >gi|323341796|ref|ZP_08082029.1| proline--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464221|gb|EFY09414.1| proline--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 569 Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 101/218 (46%), Positives = 141/218 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F ++E+ RD + S L++R G I + S G+Y ++PLG K + + IIREE Sbjct: 9 MKLSKSFFYTIREDVRDEDSTSGNLLVRAGYIKKSSSGVYMYMPLGLKVKNKIENIIREE 68 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N A EM++PTL D++V SGR D G M +L DR K + GPTHEE+ + Sbjct: 69 MNAIDAQEMTMPTLIPEDVYVASGRRDIIGTSMFQLDDRFKKPFVLGPTHEELFAQAAQM 128 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+++PF+ YQ Q KFRDE RPRFG++R REF+MKD+Y+FD E + SY+ MF + Sbjct: 129 KIRSYKDMPFSLYQFQTKFRDEARPRFGLIRVREFVMKDSYTFDADLESADKSYDAMFEA 188 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF R+GL +RA++G +GG LS EF + D GE Sbjct: 189 YKRIFDRVGLDYRIVRADTGIMGGLLSEEFQAVTDIGE 226 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/178 (37%), Positives = 106/178 (59%), Gaps = 3/178 (1%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 DV N K D P+ K V ++GIEVG+ F GTKYS M + + K V MGSYG Sbjct: 387 DVSNVKEGDPNPDGKGVLTFSKGIEVGNTFKLGTKYSKAMGLEYLDQNNKLQDVYMGSYG 446 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R +AAV+E ++D GI+WP ++APF+++++ I ++ + +Y LS+ G + Sbjct: 447 IGLGRTLAAVVEQNNDENGIVWPMNLAPFQVAIVVINNKNEEHMAFADDLYQELSQAGLE 506 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 V DD ++ G +F DL+G PL++ VG + V +VE+K R +G + + E+++N Sbjct: 507 VILDDRKQRPGIKFNDMDLIGVPLRITVG-RDVEHGEVELKERKSGNEQKIKREDILN 563 >gi|71904323|ref|YP_281126.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] gi|114152264|sp|Q48R89|SYP_STRPM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71803418|gb|AAX72771.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] Length = 618 Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 137/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAV 213 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 99/170 (58%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIEVGHIF GT+YS M AT +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEVGHIFKLGTRYSDSMGATILDENGRTVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + DQV +D K+ A L G DV DD Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P++V VG K ++ VEIK + TG +++ E +I Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLI 608 >gi|297626631|ref|YP_003688394.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922396|emb|CBL56968.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 588 Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 107/264 (40%), Positives = 154/264 (58%), Gaps = 19/264 (7%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK F+ L+++P AEI SH+ ++R G I + + GIYSWLPLG K L V I+REE + Sbjct: 2 SKLFVRTLRDDPAAAEIPSHRFLVRAGYIRRVAPGIYSWLPLGLKVLQRVENIVREEMDA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ +P L + + S R+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 62 MGGQEVLLPALLPREPYEISNRWAEYGPNLFRLVDRKGADMLLGPTHEEMFTLLVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ EG SY K +Y+R Sbjct: 122 SYKDLPVILYQIQTKYRDEARPRAGILRGREFVMKDSYSFDVDDEGLDASYLKHRDAYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK------------------ 225 IF RLG + + ++A +G +GG S EF+ L++ GE S Sbjct: 182 IFDRLGFEYVIVKANAGAMGGSASEEFLALSENGEDTFVRSAGGYAANVEAVTVPVPDPI 241 Query: 226 DFMDFPIPSENTDFDDIISLNSIV 249 DF D P P+ D D+ +++++V Sbjct: 242 DFTDAP-PARVVDTPDVPTIDTLV 264 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 4/181 (2%) Query: 258 ATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +DV + + D P+N ARG+E+GHIF G KY+ + +GK V MG Sbjct: 400 GVADVADVREGDPAPDNSGPLTLARGVEMGHIFQLGRKYAESLDLKVLDKNGKLVTVTMG 459 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R V + ES+ D KG+ WP VAPF++ ++ ++ +A +I +L Sbjct: 460 SYGIGVSRAVGMIAESTCDDKGLCWPAEVAPFQVQIVATGKGGEIL-EAATRIAEQLDAA 518 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD G +F A+LLG P ++VG + ++D VE++ R TG + ++S+EE + Sbjct: 519 GVRVLLDDRKASPGVKFTDAELLGMPTSLVVG-RGLADGVVELRDRKTGSKREVSVEEAV 577 Query: 436 N 436 + Sbjct: 578 D 578 >gi|295426319|ref|ZP_06818978.1| proline--tRNA ligase [Lactobacillus amylolyticus DSM 11664] gi|295063992|gb|EFG54941.1| proline--tRNA ligase [Lactobacillus amylolyticus DSM 11664] Length = 566 Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 101/225 (44%), Positives = 138/225 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLMLR G I Q + G+YS+LPLG + L I+ +E Sbjct: 1 MRQSKFFMPTLKEAPADAVAESHKLMLRGGYIRQVTAGVYSYLPLGFRVLRKAENIMEDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MEKINVPEMMMPHFLPATLWQESGRYKKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M DAYSF T E ++ + Sbjct: 121 NLKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDAYSFAATREQLDEQFDDEKRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 + ++ R G+ P+ A+SG +GG S EF A GE + ++ Sbjct: 181 FENVYRRCGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNE 225 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 62/162 (38%), Positives = 92/162 (56%), Gaps = 3/162 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS-HDGKGIIW 340 IEVGHIF GT Y+ M A F +GK V MGSYGIG R+++AV+E + GI W Sbjct: 406 IEVGHIFKLGTYYTKTMGADFLDNNGKAKPVIMGSYGIGVTRMLSAVVEQHLTNHGGIAW 465 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P +APF I LI +K ++ EK+ LS DV +DD E+ G +F ADL+G Sbjct: 466 PKEIAPFSIHLIQMKMNNDEQTQLAEKLEKELS-AKYDVLYDDRKERPGVKFNDADLVGA 524 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 P+++ +G K +D VE+K ++S++++ +Y + Sbjct: 525 PVRITIGRK-AADGIVEVKRPNDDKATEISVDQLNDYLTKEL 565 >gi|257869604|ref|ZP_05649257.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257803768|gb|EEV32590.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 575 Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 97/230 (42%), Positives = 146/230 (63%), Gaps = 1/230 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE SH+L++R G I Q + GIY +LPL Q+ L+ + ++REE Sbjct: 9 MKQSKLFIPTLREIPSDAETLSHQLLVRAGYIRQVAAGIYMYLPLAQRVLEKIKKLMREE 68 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM++P L +LW +GR YG+ + +L DRN++ + GPTHEE T++ +S Sbjct: 69 LAKIDAVEMTMPVLLPLELWQSTGRDGLYGRSLYQLTDRNEREYVLGPTHEEPFTELIKS 128 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ K+RDE RPRFG++RSREF+M+D YSF +Y + + Sbjct: 129 EISSYKRLPISLYQIQSKYRDEQRPRFGLIRSREFIMQDGYSFHADESSLDTTYRRYEAA 188 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y I R GL+ + ++G +GG S EF+ L+ GE ++ C D+ Sbjct: 189 YHAILQRCGLEYRAVIGDNGLMGGHDSKEFMALSQIGE-ELICYSTESDY 237 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 3/168 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ K V RGIEVGHIF GTKYS + AT +G++ V MG YGIG R+++ Sbjct: 397 DPSPDGKGVLTFTRGIEVGHIFKLGTKYSERLGATVVDENGQETPVMMGCYGIGVSRLLS 456 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++E + +GI WP +AP+ I +I D CE++ + VG +V DD E Sbjct: 457 TIVEQHGNEEGIDWPKEIAPYDIHIIQTTMEDSYQTALCEEVEQAMLAVGYEVLVDDRNE 516 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +FA ADL+G P+++ +G+K ++ VEIK + T ++ EEV Sbjct: 517 RAGVKFADADLIGCPIRLTIGNK-ATEGIVEIKIKHTNATVEVRKEEV 563 >gi|332670041|ref|YP_004453049.1| prolyl-tRNA synthetase [Cellulomonas fimi ATCC 484] gi|332339079|gb|AEE45662.1| prolyl-tRNA synthetase [Cellulomonas fimi ATCC 484] Length = 597 Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 106/272 (38%), Positives = 152/272 (55%), Gaps = 8/272 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S F+ L+E+P DAE+ASHKL++R G I + + GIY+WLPLG + L V A++REE Sbjct: 3 LRLSTLFVRTLREDPADAEVASHKLLVRAGYIRRAAPGIYTWLPLGLRVLAKVEAVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ P L + + +GR+ YG + RL DR + PTHEE+ T + + Sbjct: 63 MAAAGAQEVHFPALLPKEPYEATGRWTEYGPNIFRLKDRKGGDYLLAPTHEELFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T +QIQ K+RDE RPR G++R REF+MKDAYSFD+ G SY + Sbjct: 123 LYSSYKDLPLTLFQIQTKYRDEARPRAGLIRGREFVMKDAYSFDVDDAGLDASYAAQRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y R+F RLGL+ + + A SG +GG S EF+ GE S + + Sbjct: 183 YQRVFERLGLEYVIVSATSGAMGGSRSEEFLTPTAIGEDTFVRSAG-------GYAANVE 235 Query: 241 DIISLNSIVEQWT-APYAATSDVHNEKLFDSL 271 + ++ W+ AP A D + D+L Sbjct: 236 AVTTVAPPALDWSDAPAAHVEDTPDTPTIDTL 267 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 98/167 (58%), Gaps = 3/167 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + T +GK V MGSYGIG RV+AA+ E++HD +G+ Sbjct: 429 ARGIEIGHIFQLGRKYAQALGLTVLDQNGKSQVVTMGSYGIGVTRVLAALAEANHDDRGL 488 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP VAP + ++ D +A E + A+L G +V +DD + G +FA A+L Sbjct: 489 AWPAHVAPAHVHVVA-TGKDASVFEAAEDVAAQLVARGVEVLYDDRPKVSPGVKFADAEL 547 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL V+VG + +++ VE++ R+ G + + +V+ + + R + Sbjct: 548 FGVPLVVVVG-RGLAEGLVEVRPRVGGEPVQVPVADVVEHVAGRVAE 593 >gi|213024165|ref|ZP_03338612.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 194 Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 93/164 (56%), Positives = 123/164 (75%) Query: 58 REEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDI 117 REE N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ Sbjct: 1 REEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDL 60 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R+ + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M Sbjct: 61 VRNELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAM 120 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 + +Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + Sbjct: 121 YAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDI 164 >gi|25028444|ref|NP_738498.1| prolyl-tRNA synthetase [Corynebacterium efficiens YS-314] gi|259507503|ref|ZP_05750403.1| proline--tRNA ligase [Corynebacterium efficiens YS-314] gi|81846817|sp|Q8FP97|SYP_COREF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|23493729|dbj|BAC18698.1| putative prolyl-tRNA synthetase [Corynebacterium efficiens YS-314] gi|259164888|gb|EEW49442.1| proline--tRNA ligase [Corynebacterium efficiens YS-314] Length = 588 Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 97/225 (43%), Positives = 139/225 (61%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+YSWLPLG +AL N+ ++REE Sbjct: 4 RLSTLFLRTLREDPADAEVPSHKLLVRAGYIRRVAPGVYSWLPLGLRALRNIEQVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L + + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DAIGGQELLFPGLLPREPYETTQRWTEYGDSLFRLKDRKGADYLLGPTHEEMFASTVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T G + SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMTDAGLEESYARHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 RIF RLG++ + +A SG +GG S EF+ ++ GE + D Sbjct: 184 QRIFDRLGIEYVICKATSGAMGGSASEEFLAVSANGEDTFVRATD 228 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 6/171 (3%) Query: 269 DSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D PE + ARGIE+GHIF G KY+ +GK MGSYGIG R++A Sbjct: 410 DPAPEGQGTLTLARGIEIGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGIGVSRLLA 469 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + E HD G+ W +VAP+++ ++ D +A E+ LS+ G DV +DD + Sbjct: 470 VLAEQRHDEAGLNWSPAVAPYQVHVVAAN-KDAAAIEAAERYATELSQAGIDVLFDDRPK 528 Query: 387 -QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G +F A+LLG P +I+G + +D VE++ R G + ++ ++E + Sbjct: 529 VSPGVKFKDAELLGMPFALILGRGY-ADGTVELRVR-GGEKTELPVDEAVE 577 >gi|227833360|ref|YP_002835067.1| Prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|262184346|ref|ZP_06043767.1| prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|254782894|sp|C3PH25|SYP_CORA7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|227454376|gb|ACP33129.1| Prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] Length = 589 Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 98/217 (45%), Positives = 136/217 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G + + + G+Y+WLPLG +A+ + +IR+E Sbjct: 4 RLSELFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGVYTWLPLGLRAMRKIEDVIRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G EM P L + + ES R+ YG + RL DR M+ GPTHEE+ T + Sbjct: 64 NAIGGQEMLFPALLPREPYEESNRWTEYGDNLFRLKDRKGADMLLGPTHEEMFTTAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF MKD+YSFD+T EG SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFTMKDSYSFDMTDEGLDESYARHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RL + +A SG +GG S EF+ +++ GE Sbjct: 184 QNIFDRLEIDYAICKATSGAMGGSASEEFLAVSEVGE 220 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 3/149 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ +GK MGSYGIG R++A + E HD KG+ Sbjct: 427 RGIELGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSYGIGVTRMLAVLAEQRHDEKGLN 486 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +VAP+++ + + D +A +K+ L + G +V +DD + G +F A+LL Sbjct: 487 WPVAVAPYQVH-VAVANKDAAALEAGQKLVEDLDRAGIEVLYDDRPKVSPGVKFKDAELL 545 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 G P I+G F +D +E++ R RE Sbjct: 546 GMPFIAILGRAF-ADGIIELRIRGGETRE 573 >gi|313829616|gb|EFS67330.1| prolyl-tRNA synthetase [Propionibacterium acnes HL063PA2] Length = 581 Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 137/215 (63%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F +E P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 2 SQLFARPRREAPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMAS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 62 IGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+R Sbjct: 122 SYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RLG ++A SGP+GG S EF+ +A GE Sbjct: 182 IFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGE 216 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E + D KG+ Sbjct: 418 ARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMGSYGLGVSRAVAAIAEGTCDEKGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP VAP+ + ++ ++ D +I + L++ G +V DD G +FA +++L Sbjct: 478 CWPREVAPYDVQVLATGKGTEIL-DEATRIASELAEAGLEVLLDDRKASPGVKFADSEIL 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + + D VE++ R TG +S+ E + Sbjct: 537 GMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 >gi|312864390|ref|ZP_07724623.1| proline--tRNA ligase [Streptococcus downei F0415] gi|311100111|gb|EFQ58322.1| proline--tRNA ligase [Streptococcus downei F0415] Length = 633 Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 136/213 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DA++ SH LM+R G + Q + G+YS+LPL + ++ I+REE Sbjct: 15 MKQSQMLIPTLREMPSDAQVISHALMVRAGYVRQVTAGVYSYLPLANRVIEKFKTIMREE 74 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG ++ +L +R+ I GPTHEE T + R Sbjct: 75 FDKIGAVEMLAPALLTADLWKESGRYETYGDDLYKLKNRDQAEFILGPTHEETFTALVRD 134 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y + Sbjct: 135 SIKSYKQLPMNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDEAYEAYRQA 194 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 195 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAV 227 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AVIE Sbjct: 455 ARGIEIGHIFKLGTRYSDSMGANILDENGRSIPIIMGCYGIGVSRILSAVIEQHARLFVN 514 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + DQV +D + ++L K G V DD Sbjct: 515 KTPKGAYRFSWGINFPKELAPFDVHLITVNTKDQVAQDLTANLESQLVKAGYQVLTDDRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 575 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 612 >gi|222152444|ref|YP_002561619.1| prolyl-tRNA synthetase [Streptococcus uberis 0140J] gi|254782919|sp|B9DTD1|SYP_STRU0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|222113255|emb|CAR40772.1| prolyl-tRNA synthetase [Streptococcus uberis 0140J] Length = 618 Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 137/214 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ + I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMMRAGYVRQVSAGIYAYLPLANRTIEKLKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG ++ +L +R I GPTHEE T + R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYETYGDDLYKLKNRESSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHQNYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 Y IF R GL+ + + G +GG S EF+ + Sbjct: 181 YEAIFTRSGLEFKGIIGDGGAMGGKDSQEFMAIT 214 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/170 (38%), Positives = 97/170 (57%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIEVGHIF GT+YS + A +GK + MG YGIG R+++AVIE Sbjct: 440 ARGIEVGHIFKLGTRYSDSLGANILDENGKSIPIVMGCYGIGVSRILSAVIEQHARLFVS 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF I LI + D+ + +K+ L G +V DD Sbjct: 500 KTPKGEYRYSWGINFPKELAPFDIHLITVNTKDEEAQTLTDKLEKELMTKGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P+++ VG K S+ VEIK + +G +++ E VI Sbjct: 560 ERVGSKFSDSDLIGLPIRITVGKK-ASEGIVEIKIKASGDSIEVNAENVI 608 >gi|256824985|ref|YP_003148945.1| prolyl-tRNA synthetase [Kytococcus sedentarius DSM 20547] gi|256688378|gb|ACV06180.1| prolyl-tRNA synthetase, family II [Kytococcus sedentarius DSM 20547] Length = 596 Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 96/218 (44%), Positives = 139/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S FL L+E+P DAE+ H+L++R G + + + GIY+WLPLG K ++ V I+REE Sbjct: 3 MRMSTLFLRTLREDPTDAELPGHRLLVRAGYVRRVAPGIYTWLPLGLKVMEKVKGIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E++ P+L + + S R+ YG ++ RL DR M+ GPTHEE+ T + Sbjct: 63 MEAIGDQEIAFPSLLPREPYEASNRWTEYGDDLFRLTDRKGADMLLGPTHEEMFTLAVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP +QI K+RDELRPR GV+R REF MKDAYSFD+ G + +Y + + Sbjct: 123 LYTSYKDLPLGLFQILPKYRDELRPRAGVLRGREFTMKDAYSFDVDEAGLEAAYQRHRKA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y R+F RLG + + + A+SG +GG S EF+ + D+GE Sbjct: 183 YTRVFDRLGFEYVAVHADSGAMGGSASEEFLAVMDSGE 220 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 83/147 (56%), Gaps = 3/147 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARG+E+GHIF GTKY+ + +GK VQMGSYGIG R V V E+ HD G+ Sbjct: 431 ARGVEMGHIFQLGTKYAEALGLKVLDQNGKLVTVQMGSYGIGITRAVGVVAETHHDEIGL 490 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 +WP ++P + ++ D + E++ A L + G V DD + G +F A+L Sbjct: 491 VWPRELSPADVHVVAT-GKDAAVLEKAEELTAALEQQGLTVLLDDRPKVSPGVKFKDAEL 549 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +G P ++VG K +++ +VEIK R G Sbjct: 550 IGVPTILVVG-KGLAEGEVEIKDRAAG 575 >gi|228476457|ref|ZP_04061147.1| prolyl-tRNA synthetase [Streptococcus salivarius SK126] gi|228251878|gb|EEK10924.1| prolyl-tRNA synthetase [Streptococcus salivarius SK126] Length = 621 Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 138/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK + L+E P DA++ SH LM+R G + Q S GIY+++PL +A++ I+REE Sbjct: 2 MKQSKMLISTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKTIMREE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 62 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTALVRD 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF E +Y + Sbjct: 122 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDAYSFHQNYEDLDVTYEDYRKA 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL+ + + G +GG S EF+ + Sbjct: 182 YEAIFTRAGLEFKGIIGDGGAMGGKDSQEFMAV 214 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AVIE Sbjct: 441 ARGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVSRILSAVIEQHARLFVN 500 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +AP+ + LI + D+ E++ A L G DV DD Sbjct: 501 KTPKGQYRYAWGINFPKELAPYDVHLITVNTKDEEANALTERLEAALMAEGYDVLTDDRN 560 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + TG Sbjct: 561 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATG 598 >gi|302864555|ref|YP_003833192.1| prolyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|302567414|gb|ADL43616.1| prolyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] Length = 589 Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 114/304 (37%), Positives = 162/304 (53%), Gaps = 17/304 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S L L+E+P DAE+ SH+L+LR G + + + G Y+WLPLG+ LD + AI+R+E Sbjct: 3 LRMSTLLLRTLREDPADAEVPSHRLLLRAGYVRRAAPGGYTWLPLGKLVLDRITAIVRDE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P L A+ + SGR+ YG ++ LADR + PTHEE+ + + Sbjct: 63 MTGIGDQEVHFPALLPAEPYRTSGRWTEYGDDIFTLADRKGAEHLLAPTHEELAALLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SYR+ P T +QIQ KFRDE RPR G++R REFLMKDAYSFDL G + +Y++ + Sbjct: 123 LFTSYRDFPVTLFQIQTKFRDEARPRAGLLRGREFLMKDAYSFDLDEAGLQAAYDRHRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDF 239 Y R+F RLGL + A SG +GG S EF+ GE T V C T Sbjct: 183 YERVFTRLGLDFTTVHAMSGAMGGSASEEFLAATPVGEDTFVGC-------------TAC 229 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + ++V + AP A D + PE ++A +E+ G + + Sbjct: 230 DYAANTEAVVTR--APAAGDPDAYPPAEVHDTPETPTIAAL-VELAEARELGGRTGWTAA 286 Query: 300 ATFK 303 T K Sbjct: 287 DTLK 290 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G +Y+ + G +GK MG YGIG R VAAV E HD +G++ Sbjct: 421 RGIEIGHIFQLGRRYTDAFAVDVLGPEGKPVRPTMGCYGIGVSRAVAAVAEQHHDDRGLV 480 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +VAP + LI Q+ DA + RL+ G V DD G +F A+L+ Sbjct: 481 WPAAVAPCDVHLIAAGKGPQL--DAALDLGGRLAAAGLRVLVDDRTHVSAGVKFTDAELI 538 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P V+VG + ++ VE++ R TG R ++ +E ++ Sbjct: 539 GIPRAVVVGRRL-AEGYVELRDRATGERTELPVEAIVE 575 >gi|227874914|ref|ZP_03993066.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35243] gi|269976484|ref|ZP_06183469.1| prolyl-tRNA synthetase [Mobiluncus mulieris 28-1] gi|306818238|ref|ZP_07451968.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35239] gi|307701739|ref|ZP_07638753.1| proline--tRNA ligase [Mobiluncus mulieris FB024-16] gi|227844491|gb|EEJ54648.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35243] gi|269935285|gb|EEZ91834.1| prolyl-tRNA synthetase [Mobiluncus mulieris 28-1] gi|304648977|gb|EFM46272.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35239] gi|307612997|gb|EFN92252.1| proline--tRNA ligase [Mobiluncus mulieris FB024-16] Length = 633 Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 118/319 (36%), Positives = 169/319 (52%), Gaps = 38/319 (11%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S YF L+E+P +AE+ SHKL++R G I + + GIY+WLPLG + L N+ ++REE Sbjct: 4 RMSSYFARTLREDPVEAEVDSHKLLVRAGYIRRAAPGIYTWLPLGLRVLRNIENVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G E+ P L + + + R++ +G + +L DR + GPTHEE+ T I + Sbjct: 64 DRIGGQELQFPVLLPREPYEATNRWEEFGSSLFKLQDRKGGDYLLGPTHEEMFTVIVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQI+ K+RDE RPR GV+R REF+MKD YSFDLT EG HSY +Y Sbjct: 124 FSSYKDLPILLYQIKEKYRDEARPRAGVIRGREFVMKDLYSFDLTDEGLAHSYALNRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE------------------TQVFC 223 R++ RLGL+ +A+SG +GG S EF+ D GE T V Sbjct: 184 RRVYTRLGLEFAICQAQSGAMGGSASEEFLFPCDIGEDTFVRSPGGYAANAEAVTTAVPE 243 Query: 224 SKDFMDFPIPSENTDFDDIISLNSIVEQ-----------WTAP--------YAATSDVHN 264 + F D P P E D ++ S+V + W A A D H+ Sbjct: 244 ALPFDDAPAP-EVLPTPDSTTIESLVAKANELYPRKDRPWRAEDTLKNVVVVAEEPDGHS 302 Query: 265 EKLFDSLPENKRVSARGIE 283 E + +P N+ V + +E Sbjct: 303 EVIVVGVPGNREVDMKRLE 321 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 3/158 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + T +GK V MGSYGIG R+VAA+ E++HD KG+ Sbjct: 433 ARGIEIGHIFALGRKYAKALGLTVLDENGKAQVVTMGSYGIGVSRLVAAIAENTHDDKGL 492 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 +WP +VAPF++ ++ QV A EK+ L G V +DD + G +F A+L Sbjct: 493 VWPVNVAPFQVHVLATGKDPQVFA-AAEKLARELEAAGIPVLYDDRAKASAGVKFKDAEL 551 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G P ++VG K +++ VEI+ R G D ++E + Sbjct: 552 MGMPYLLVVG-KGLANGTVEIRDRRAGNTLDCTVEAAV 588 >gi|315500848|ref|YP_004079735.1| prolyl-tRNA synthetase [Micromonospora sp. L5] gi|315407467|gb|ADU05584.1| prolyl-tRNA synthetase [Micromonospora sp. L5] Length = 589 Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 114/304 (37%), Positives = 162/304 (53%), Gaps = 17/304 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S L L+E+P DAE+ SH+L+LR G + + + G Y+WLPLG+ LD + AI+R+E Sbjct: 3 LRMSTLLLRTLREDPADAEVPSHRLLLRAGYVRRAAPGGYTWLPLGKLVLDRITAIVRDE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P L A+ + SGR+ YG ++ LADR + PTHEE+ + + Sbjct: 63 MTGIGDQEVHFPALLPAEPYRTSGRWTEYGDDIFTLADRKGAEHLLAPTHEELAALLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SYR+ P T +QIQ KFRDE RPR G++R REFLMKDAYSFDL G + +Y++ + Sbjct: 123 LFTSYRDFPVTLFQIQTKFRDEARPRAGLLRGREFLMKDAYSFDLDEAGLQAAYDRHRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDF 239 Y R+F RLGL + A SG +GG S EF+ GE T V C T Sbjct: 183 YERVFTRLGLDFTTVHAMSGAMGGSASEEFLAATPVGEDTFVGC-------------TAC 229 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + ++V + AP A D + PE ++A +E+ G + + Sbjct: 230 DYAANTEAVVTR--APAAGDPDAYPPAEVHDTPETPTIAAL-VELAEARELGGRTGWTAA 286 Query: 300 ATFK 303 T K Sbjct: 287 DTLK 290 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G +Y+ + G +GK MG YGIG R VAAV E HD +G++ Sbjct: 421 RGIEIGHIFQLGRRYTDAFAVDVLGPEGKPVRPTMGCYGIGVSRAVAAVAEQHHDDRGLV 480 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +VAP + LI Q+ DA + RL+ G V DD G +F A+L+ Sbjct: 481 WPAAVAPCDVHLIAAGKGPQL--DAALDLGGRLAAAGLRVLVDDRTHVSAGVKFTDAELI 538 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P V+VG + ++ VE++ R TG R ++ +E ++ Sbjct: 539 GIPRAVVVGRRL-AEGYVELRDRATGERTELPVEAIVE 575 >gi|324998197|ref|ZP_08119309.1| prolyl-tRNA synthetase [Pseudonocardia sp. P1] Length = 577 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 97/215 (45%), Positives = 135/215 (62%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+E+P DAE+ SHKL++R G + + + G+YSWLPLG K L + ++REE + Sbjct: 2 SSLFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGVYSWLPLGLKVLRRIENVVREEMDA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L + + + R+ YG + R+ DR + GPTHEE+ T + Sbjct: 62 MGGQEIQFPALLPREPYEATNRWTEYGPALFRIQDRKGGDYLLGPTHEELFTLAVKGEYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFDL+ EG SY K +Y+R Sbjct: 122 SYKDYPVVLYQIQTKYRDEERPRAGILRGREFLMKDSYSFDLSDEGLSESYGKHRDTYIR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RL LK + + A SG +GG S EF+ ++TGE Sbjct: 182 IFDRLALKYVIVAATSGAMGGSASEEFLAESETGE 216 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 2/152 (1%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIE+GHIF G KY+ S G D K + MGSYGIG R+VAA+ E HD G Sbjct: 412 AARGIEIGHIFQLGRKYADAFSLDALGPDSKPVRITMGSYGIGVSRLVAAIAEQCHDDSG 471 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 ++WP SVAPF + ++ + + E + A L G V DD G +FA A+L Sbjct: 472 LVWPRSVAPFDVHVV-VAGKSAELLEGGEVLAAELEAEGLSVILDDRKASPGVKFADAEL 530 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +G P V+VG + ++D K+E+K R TG R ++ Sbjct: 531 VGVPTIVVVG-RGLADGKIELKDRATGERTEI 561 >gi|315635814|ref|ZP_07891076.1| proline--tRNA ligase [Arcobacter butzleri JV22] gi|315479793|gb|EFU70464.1| proline--tRNA ligase [Arcobacter butzleri JV22] Length = 568 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 139/224 (62%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F+P +E P DA + SH+ ++R G I Q GIY ++PLG+ L+ + I++EE Sbjct: 1 MKFSKMFIPTTKETPNDATLPSHQYLVRGGFIAQTGAGIYDFMPLGKIVLEKIRTIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ + LW ESGR + G EMLR DR + + PT+EE + ++ ++ Sbjct: 61 MDEAGANEVQFGFVTPLTLWQESGRATTMGAEMLRFKDRKNGEFVLSPTNEEAVVNMVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP YQI KFRDE RPRFG+MR REFLMKD YSF + E +N M + Sbjct: 121 RITSYKDLPLHLYQINTKFRDEARPRFGLMRGREFLMKDGYSFHSSEEDLVREFNLMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y +I+ +LGL + A+SG IGG S EF V+AD+GE T V C Sbjct: 181 YKKIYTKLGLDFRVVAADSGAIGGSGSKEFHVIADSGEDTLVVC 224 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 64/158 (40%), Positives = 93/158 (58%), Gaps = 2/158 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIE GHIF GTKYS M+A F +GK MG YGIG R+VAAVIE +HD KG + Sbjct: 405 KGIEAGHIFQLGTKYSSAMNANFLDENGKAKPFIMGCYGIGVSRLVAAVIEQNHDDKGCV 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 W + APF + +I + + E++Y++L + G DD + + G + + +LL Sbjct: 465 WTKATAPFMVDIIVSNSKKEEEAKVGEELYSKLKQAGISTILDDRINARFGFKMSDFELL 524 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 GFP V++G K + D VEI R T + D+ ++EVI+ Sbjct: 525 GFPYAVVIGKK-LEDGLVEIVDRKTLEKIDLKVDEVIS 561 >gi|227488647|ref|ZP_03918963.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227543250|ref|ZP_03973299.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] gi|227091541|gb|EEI26853.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181059|gb|EEI62031.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] Length = 588 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 97/225 (43%), Positives = 137/225 (60%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+Y+WLPLG + L + I+REE Sbjct: 4 RLSTLFLRTLREDPADAEVPSHKLLVRAGYIRRVAPGVYTWLPLGLRVLRKIENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + + R+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 64 NAIGGQELRFPALLPREPYELTQRWTEYGNSLFRLKDRKGNDMLLGPTHEEMFTQVVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSF++ EG SY +Y Sbjct: 124 YSSYKDFPVLLYQIQTKYRDEERPRAGILRGREFVMKDSYSFNMDDEGLDESYQNHRQAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 IF+RLGL + +A SG +GG S EF+ +++ GE S D Sbjct: 184 QNIFNRLGLDYVICKATSGAMGGSASEEFLAVSENGEDTFVQSSD 228 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 92/161 (57%), Gaps = 6/161 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ M +GK MGSYGIG R +A ++E S+D KG++ Sbjct: 422 RGIEIGHIFQLGRKYTTAMDVQILDENGKRSVPTMGSYGIGVSRAMAVIVEQSYDDKGLV 481 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP VAP+ + ++ + D+ +DA EK+ A L G +V +DD + G +F A+LL Sbjct: 482 WPACVAPYHVHVV-VANKDKEAQDAAEKLVADLDAAGIEVLFDDRPKVSPGVKFKDAELL 540 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR---LTGIREDMSLEEVIN 436 G P V++G F D ++E + R + I D +LE ++ Sbjct: 541 GIPYTVVLGRAF-KDGEIEFRVRAGETSTIPVDGALEHIVT 580 >gi|119963667|ref|YP_947320.1| prolyl-tRNA synthetase [Arthrobacter aurescens TC1] gi|152074745|sp|A1R508|SYP_ARTAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119950526|gb|ABM09437.1| prolyl-tRNA synthetase [Arthrobacter aurescens TC1] Length = 603 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 109/271 (40%), Positives = 154/271 (56%), Gaps = 6/271 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S+ FL L+E+P DAE+ SHKL++R G I + + GIY+WLPLG L V IIR+E Sbjct: 3 LRLSQLFLRTLREDPVDAEVDSHKLLVRAGYIRRAAPGIYTWLPLGLSVLRKVEDIIRQE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ P L + + + R+ YG+ + RL DR + PTHEE+ T + + Sbjct: 63 MSAIGAQEVHFPALLPREPYEATNRWTEYGEGLFRLQDRKGADYLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY + Sbjct: 123 LYSSYKDLPLSLYQIQNKYRDEARPRAGLLRGREFIMKDSYSFDIDDAGLDASYAAHRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF RLGL+ IP+ A +G +GG S EF+ + GE S + + T Sbjct: 183 YLKIFERLGLEVIPVAATAGAMGGSKSEEFLFPTEIGEDTFVRSAGGYYANVEAVTTVVP 242 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D I ++ AP A D N D+L Sbjct: 243 DEIDFSN------APAAEVLDTPNTPTIDTL 267 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 98/161 (60%), Gaps = 3/161 (1%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E+++D +G Sbjct: 437 TARGIEMGHIFQLGRKYAEALDLKVLDQNGKQQVVTMGSYGVGVTRAVAALAEANNDDRG 496 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVAD 396 ++WP SVAP + ++ + D++ +A EK+ L G DV +DD + G +F A+ Sbjct: 497 LVWPRSVAPADVHVVAVGRGDEIF-EAAEKLSLELEAAGLDVIFDDRPKVSPGVKFGDAE 555 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 L+G P + VG V D VEIK R +G E++S+++ ++Y Sbjct: 556 LVGVPTILAVGRGLV-DGVVEIKDRRSGEAENISVDKAVDY 595 >gi|225867815|ref|YP_002743763.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] gi|259511619|sp|C0MFA1|SYP_STRS7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225701091|emb|CAW97925.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] Length = 618 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLAHRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + + +Y+ + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHQSYDDLDVTYDAYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 103/183 (56%), Gaps = 16/183 (8%) Query: 257 AATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ K ++ P+ V ARGIE+GHIF GT+YS M+A +G+ + M Sbjct: 416 AEYADIREVKEGETSPDGHGVLQFARGIEIGHIFKLGTRYSDSMAANILDENGRAVPIVM 475 Query: 315 GSYGIGAMRVVAAVIES------SHDGKG-------IIWPDSVAPFKISLINIKAHDQVC 361 G YGIG R+++AVIE S KG I +P +APF + LI + DQ Sbjct: 476 GCYGIGVSRILSAVIEQHARLFVSKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQEA 535 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +D EK+ A L G DV DD E++GS+F+ +DL+G P++V +G K ++ VEIK + Sbjct: 536 QDLTEKVEASLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTIGKK-AAEGIVEIKIK 594 Query: 422 LTG 424 TG Sbjct: 595 ATG 597 >gi|330464914|ref|YP_004402657.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032] gi|328807885|gb|AEB42057.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032] Length = 583 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 102/225 (45%), Positives = 139/225 (61%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S L L+++P DAE+ SH+L+LR G + + + G Y+WLPLG+ LD V+ I+R E Sbjct: 3 LRMSTTLLRTLRDDPADAEVPSHRLLLRAGYLRRAAPGGYTWLPLGKLVLDRVSEIVRAE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P L A+ + SGR+ YG ++ LADR + PTHEE+ + + Sbjct: 63 MAAIGGQEVHFPALLPAEPYRTSGRWTEYGDDIFTLADRRGAEHLLAPTHEEMAALLVKE 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SYR+LP T +QIQ KFRDE RPR G++R REFLMKDAYSFDL EG + +Y + + Sbjct: 123 LFTSYRDLPVTLFQIQTKFRDEARPRAGLLRGREFLMKDAYSFDLDDEGLRAAYGRHRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 Y +IF RLGL + A SG +GG S EF+ A GE T V C+ Sbjct: 183 YQKIFDRLGLDYTVVHAVSGAMGGSASEEFLATAAVGEDTYVGCT 227 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 4/157 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G +Y+ + G GK + MG YGIG R VAA+ E HD +G++ Sbjct: 421 RGIEIGHIFQLGRRYTDAFAVDVLGPQGKPVRLTMGCYGIGVSRAVAAIAEQHHDERGLV 480 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP SVAP + L+ Q+ DA + A+L+ G V DD +G G +F A+L+ Sbjct: 481 WPTSVAPCDVHLVAAGKGPQL--DAAVDLGAQLAAAGLRVLVDDRVGVSAGVKFTDAELI 538 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P V+VG + +D VE++ R TG R ++SL +++ Sbjct: 539 GIPRTVVVGRRL-ADGYVELRDRATGERVELSLPDLL 574 >gi|225871275|ref|YP_002747222.1| prolyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] gi|254782916|sp|C0M9E6|SYP_STRE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225700679|emb|CAW95268.1| prolyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] Length = 618 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 139/213 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLAHRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + + +Y+ + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHQSYDDLDVTYDAYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 70/183 (38%), Positives = 103/183 (56%), Gaps = 16/183 (8%) Query: 257 AATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ K ++ P+ V ARGIE+GHIF GT+YS M+A +G+ + M Sbjct: 416 AEYADIREVKEGETSPDRHGVLQFARGIEIGHIFKLGTRYSDSMAANILDENGRAVPIVM 475 Query: 315 GSYGIGAMRVVAAVIES------SHDGKG-------IIWPDSVAPFKISLINIKAHDQVC 361 G YGIG R+++AVIE S KG I +P +APF + LI + DQ Sbjct: 476 GCYGIGVSRILSAVIEQHARLFVSKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQEA 535 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +D E++ A L G DV DD E++GS+F+ +DL+G P++V +G K ++ VEIK + Sbjct: 536 QDLTERVEASLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTIGKK-AAEGIVEIKIK 594 Query: 422 LTG 424 TG Sbjct: 595 ATG 597 >gi|256379843|ref|YP_003103503.1| prolyl-tRNA synthetase [Actinosynnema mirum DSM 43827] gi|255924146|gb|ACU39657.1| prolyl-tRNA synthetase [Actinosynnema mirum DSM 43827] Length = 581 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 135/217 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G + + + G YSWLPLG + L N+ ++REE Sbjct: 4 RMSSLFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGGYSWLPLGLRVLRNIERVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DAIGAQEIQFPALLPKEPYEATNRWTEYGPNIFRLKDRKGADYLLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFDLT EG +Y + +Y Sbjct: 124 YSSYKDYPVALYQIQTKYRDEARPRAGILRGREFVMKDSYSFDLTDEGLAEAYQRHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 ++IF RLG+ + + A SG +GG S EF+ +A GE Sbjct: 184 IKIFDRLGMDYVIVSATSGAMGGSASEEFLAVAPNGE 220 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 102/182 (56%), Gaps = 4/182 (2%) Query: 258 ATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T DV + D P+ K V +ARGIE+GHIF G KY+ S G DGK + MG Sbjct: 395 GTIDVAEVREGDPSPDGKGVLVAARGIEIGHIFQLGRKYADAFSLDALGPDGKPVRITMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VAA+ E SHD +G+IWP +VAP + ++ + D + EK+ LS Sbjct: 455 SYGIGVSRLVAAIAEQSHDDRGLIWPRNVAPADVHVV-VAGKDATLLEGGEKLAGELSSA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD G +FA A+L+G P ++VG S VE+K R +G R ++ ++E + Sbjct: 514 GLSVLLDDRKASPGVKFADAELVGVPTILVVGRGLAS-GLVEVKDRRSGERVEVPVDEAV 572 Query: 436 NY 437 + Sbjct: 573 QH 574 >gi|50550793|ref|XP_502869.1| YALI0D15620p [Yarrowia lipolytica] gi|49648737|emb|CAG81057.1| YALI0D15620p [Yarrowia lipolytica] Length = 445 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 147/433 (33%), Positives = 219/433 (50%), Gaps = 48/433 (11%) Query: 25 LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESG 84 L+ TG + S G+ + LPLG + + IIR E + G E+S+ DLW ++G Sbjct: 25 LLAVTGYVSYPSSGLANLLPLGLRVQRKIENIIRSELDSIGCAEVSLSNFSDPDLWRKTG 84 Query: 85 RYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 R ++ E+ R+ D ++ I PTHEE +T++ I S ++LP +YQI K+R+E R Sbjct: 85 RINN--GELFRVNDGSEDPPIIAPTHEEEITNLIAQKISSPKDLPILWYQIGKKYRNEAR 142 Query: 145 PRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGG 204 PR G++R +EF MKD YSFD+ + SY+ + +Y +IF +LG+ + A+SG IGG Sbjct: 143 PRGGLLRGKEFTMKDLYSFDVDEPRALESYDLVRKAYDQIFGKLGVPVKSVAADSGAIGG 202 Query: 205 DLSHEFIVLADTGE-TQVFCSK-DFMDFPIPSENTDFDD---IISLNSIVEQWTAPYAAT 259 SHE+ V+ +GE T V CS D+ +E D +N ++ + +A Sbjct: 203 SHSHEYHVIDASGEDTLVTCSSCDYSANIEVAERAAGDSETICTEVNGVLVTHESSHAVN 262 Query: 260 SDV-----------------------HN---EKLFDSLPENKRVS---ARGIEVGHIFYF 290 + HN K DS P N S + IEVGH FY Sbjct: 263 PRLVDRALSSYGHDAYKISMLRDGVSHNLTTPKEGDSCP-NCTSSLKFSNAIEVGHTFYL 321 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK-I 349 GTKYS +S FK ++ K MG YGIG R+VAA+ E S D G+ WP +VAP++ + Sbjct: 322 GTKYSKSLSCDFKNSENKLTPAFMGCYGIGITRLVAAIAEVSRDQHGLKWPSNVAPYETV 381 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGS 408 ++ A + D ++ A L D DD ++ IG + A L+GFP QV+V Sbjct: 382 VILGGGATESTLLDKASELGALLQ----DAVIDDRPKRSIGWKINEAKLMGFP-QVVV-- 434 Query: 409 KFVSDSKVEIKHR 421 V +E+ HR Sbjct: 435 --VKKDGIEVIHR 445 >gi|251781674|ref|YP_002995976.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390303|dbj|BAH80762.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 618 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 135/213 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG ++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGDDLYKLKNRDKSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHPNYDDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 97/170 (57%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIEVGHIF GT+YS M AT +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEVGHIFKLGTRYSDSMGATILDENGRAVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + DQ +D + A L G +V DD Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQAAQDLTATLEADLMAKGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P++V VG K +D VEIK + TG +++ + +I Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEIKIKATGDSIEVTADNLI 608 >gi|323126466|gb|ADX23763.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 618 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 135/213 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG ++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGDDLYKLKNRDKSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHPNYDDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 97/170 (57%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIEVGHIF GT+YS M AT +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEVGHIFKLGTRYSDSMGATILDENGRAVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + DQ +D + A L G DV DD Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQAAQDLTATLEADLMANGYDVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P++V VG K +D VEIK + TG +++ + +I Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEIKIKATGDSIEVTADNLI 608 >gi|289674658|ref|ZP_06495548.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5] Length = 172 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 89/163 (54%), Positives = 122/163 (74%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF Sbjct: 121 ELNSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSF 163 >gi|72383677|ref|YP_293032.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] gi|114152229|sp|Q46GR7|SYP_PROMT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|72003527|gb|AAZ59329.1| prolyl-tRNA synthetase, bacterial [Prochlorococcus marinus str. NATL2A] Length = 596 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 101/229 (44%), Positives = 145/229 (63%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +A+I SH+L++R G + + + GIY+++PL K L + +I+ EE Sbjct: 1 MRVSRLMLNTLRDVPAEADIISHQLLVRGGYVKRLTGGIYAYMPLLWKVLKKITSIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + G ++ +P LQ +++W SGR+ SY K M L DR K + GPTHEEV+T I Sbjct: 61 LSTKGCLQTLLPQLQPSEIWERSGRWKSYTKGEGIMFSLKDRQGKELGLGPTHEEVITQI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 I SY+ LP +QIQ KFRDE+RPRFG+MRSREF+MKDAYSF + +Y+ M Sbjct: 121 ISQTIHSYKQLPINIFQIQTKFRDEIRPRFGLMRSREFIMKDAYSFHANENDLQSTYSDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y IF + GL + + A+SG IGG S EF+V A++GE + S D Sbjct: 181 RNAYENIFTKCGLDFVCVDADSGAIGGAASQEFMVTAESGEDLILISSD 229 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 92/276 (33%), Positives = 132/276 (47%), Gaps = 29/276 (10%) Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-----CSKDFMDF----PIPSE 235 + G+ +IP G IG DLS + + E + +KD F I E Sbjct: 335 MQKQGISNIPF----GFIGPDLSDNLLAQSKAWEKKFIRIADNSAKDLKSFICGNNIKDE 390 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS---ARGIEVGHIFYFGT 292 + F + +N++ D+ K D +K RGIE+GHIF GT Sbjct: 391 HKIFYNWNLINTV--------QMICDIRKAKPGDRCIHDKTQKLQECRGIEIGHIFQLGT 442 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI--S 350 KYS ++ATF G + + MG YGIG R+ A +E +HD GIIWP S+APF + Sbjct: 443 KYSKSLNATFTNEKGVEDHFWMGCYGIGISRLAQAAVEQNHDDLGIIWPTSIAPFTVIII 502 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + NIK +DQ C E IY +L + DV DD E+ G +F ADL+G P +++ G + Sbjct: 503 IANIKNNDQKC--LAEDIYQKLIQDRVDVLLDDRDERAGIKFKDADLIGIPWRIVAGRE- 559 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 S VE+ +R T I E + L V S F+ + Sbjct: 560 ASSGLVELHNRKTKITELLDLNSVFKKLSEEFNTEK 595 >gi|297571190|ref|YP_003696964.1| prolyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] gi|296931537|gb|ADH92345.1| prolyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] Length = 595 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 96/215 (44%), Positives = 137/215 (63%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F+ L+++P DAE+ SHKL++R G + + + GIY+WLPLG K L V A++REE + Sbjct: 2 SELFVRTLRDDPADAEVRSHKLLVRAGYVRRAAPGIYTWLPLGLKVLRKVEAVVREEMDA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G+ EM P L + + + R++ YG + RL DR + + PTHEE+ T + Sbjct: 62 AGSQEMHFPALLPREPYEATNRWEEYGPNLFRLKDRRENDYLLAPTHEEMFTLAVKDMYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP + YQIQ K+RDE RPR G++R+REF+MKDAYSFD+ G HSY M +Y R Sbjct: 122 SYKDLPVSLYQIQHKYRDEARPRAGIIRTREFIMKDAYSFDIDDSGLDHSYETMRNAYQR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RLG+ + A+SG +GG S EF+ GE Sbjct: 182 IFTRLGVPFVICSAQSGAMGGSRSEEFLAPCAIGE 216 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/146 (40%), Positives = 84/146 (57%), Gaps = 3/146 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ + +GK V MGSYGIG RV+AA+ E + D KG+ Sbjct: 430 RGIEIGHIFQLGRKYAKALDLKVLDQNGKAVVVTMGSYGIGVSRVMAALAELNSDDKGLA 489 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP +AP + +I D V D + A LS+ G +V +DD + G +FA +L+ Sbjct: 490 WPAHLAPATVHVIATGKDDAVF-DTASRFAAELSEQGVEVIYDDRVKVSAGVKFADYELI 548 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G P ++VG + + D KVEI+ R +G Sbjct: 549 GVPFAIVVG-RGLKDGKVEIRDRRSG 573 >gi|322411037|gb|EFY01945.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 618 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 135/213 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG ++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGDDLYKLKNRDKSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHPNYDDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 97/170 (57%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIEVGHIF GT+YS M AT +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEVGHIFKLGTRYSDSMGATILDDNGRAVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + DQ +D + A L G DV DD Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQAAQDLTATLEADLMAKGYDVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P++V VG K +D VEIK + TG +++ + +I Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEIKIKATGDSVEVTADNLI 608 >gi|319745866|gb|EFV98156.1| proline--tRNA ligase [Streptococcus agalactiae ATCC 13813] Length = 617 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 136/214 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVT 214 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 94/159 (59%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + + MG YGIG R+++AVIE Sbjct: 440 ARGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P+ +APF + LI + DQ +D EKI A L G +V DD Sbjct: 500 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + +G Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASG 597 >gi|157150969|ref|YP_001451117.1| prolyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] gi|189083519|sp|A8AZA7|SYP_STRGC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157075763|gb|ABV10446.1| prolyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] Length = 616 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 137/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L+LR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRY++YG ++ +L +R I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYETYGDDLFKLKNREGSDFILGPTHEETFTALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVTYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R + + + G +GG S EF+ + Sbjct: 181 YEKIFTRSEIDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+AT +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNATVLDENGRAVPLVMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ +KI L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEESLALTDKIEESLVGAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P++V VG K ++ VE+K + +G Sbjct: 560 ERVGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKASG 597 >gi|220912189|ref|YP_002487498.1| prolyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] gi|219859067|gb|ACL39409.1| prolyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] Length = 599 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 114/301 (37%), Positives = 161/301 (53%), Gaps = 29/301 (9%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ FL L+E+P DAE+ASHKL++R G I + + GIY+WLPLG L V +IREE Sbjct: 2 SQLFLRTLREDPVDAEVASHKLLVRAGYIRRAAPGIYTWLPLGLSVLRKVEQVIREEMAA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L + + + R+ YG+ + RL DR + PTHEE+ T + + Sbjct: 62 IGAQEVHFPALLPREPYEATNRWTEYGEGLFRLQDRKGADYLLAPTHEEMFTLLVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY +YL+ Sbjct: 122 SYKDLPLSLYQIQNKYRDEARPRAGLLRGREFIMKDSYSFDVDDAGLDASYAAHRSAYLK 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE------------------TQVFCSK 225 IF RLGL +P+ A +G +GG S EF+ + GE T V Sbjct: 182 IFERLGLDVVPVAATAGAMGGSRSEEFLFPTEIGEDTFVRSAAGYAANVEAVTTVVPADI 241 Query: 226 DFMDFPIPSENTDFDDIISLNSIV----------EQWTAPYAATSDVHNEKLFDSLPENK 275 DF P +E D D ++ ++V E P+ A + N L +LP + Sbjct: 242 DFTGAPA-AEVLDTPDTPTIETLVNASNQIAPRAEADGGPWTAADTLKNVVLAVTLPTGE 300 Query: 276 R 276 R Sbjct: 301 R 301 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/169 (37%), Positives = 97/169 (57%), Gaps = 3/169 (1%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E++HD KG Sbjct: 433 TARGIEMGHIFQLGRKYAAALDLKVLDQNGKQVTVTMGSYGVGVTRAVAALAEANHDAKG 492 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVAD 396 + WP +VAP + ++ + + + A E++ L G DV +DD G +F A+ Sbjct: 493 LTWPRAVAPADVHVVAVGKGEDIFA-AAEQLSVGLEAAGLDVIYDDRFKVSPGVKFGDAE 551 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 LLG P + VG V D VEIK R TG E++++++ ++Y + N+ Sbjct: 552 LLGVPTILAVGRGLV-DGVVEIKDRRTGEAENVAVDKAVDYVVNAVRNS 599 >gi|77405643|ref|ZP_00782731.1| prolyl-tRNA synthetase [Streptococcus agalactiae H36B] gi|161486742|ref|YP_330466.2| prolyl-tRNA synthetase [Streptococcus agalactiae A909] gi|114152259|sp|Q3JZ37|SYP_STRA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|77175716|gb|EAO78497.1| prolyl-tRNA synthetase [Streptococcus agalactiae H36B] Length = 617 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 136/214 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVT 214 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 +RGIE+GHIF GT+YS M A +G+ + + MG YGIG R+++AVIE Sbjct: 440 SRGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P+ +APF + LI + DQ +D EKI A L G +V DD Sbjct: 500 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + +G Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASG 597 >gi|22538051|ref|NP_688902.1| prolyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76798737|ref|ZP_00780956.1| prolyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77414704|ref|ZP_00790836.1| prolyl-tRNA synthetase [Streptococcus agalactiae 515] gi|81845373|sp|Q8DXD8|SYP_STRA5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|22534955|gb|AAN00775.1|AE014278_2 prolyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76585916|gb|EAO62455.1| prolyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77159248|gb|EAO70427.1| prolyl-tRNA synthetase [Streptococcus agalactiae 515] Length = 617 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 136/214 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVT 214 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 94/159 (59%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + + MG YGIG R+++AVIE Sbjct: 440 ARGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P+ +APF + LI + DQ +D EKI A L G +V DD Sbjct: 500 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + +G Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASG 597 >gi|262283493|ref|ZP_06061259.1| prolyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] gi|262260984|gb|EEY79684.1| prolyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] Length = 616 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 137/213 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L+LR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRY++YG ++ +L +R I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYETYGDDLFKLKNREGSDFILGPTHEETFTALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVTYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y +IF R + + + G +GG S EF+ + Sbjct: 181 YEKIFTRSEIDFKAIIGDGGAMGGKDSQEFMAI 213 Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+AT +G+ + MG YGIG R+++AV+E Sbjct: 440 ARGIEIGHIFKLGTRYSDSMNATVLDENGRAVPLVMGCYGIGVSRLLSAVMEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ +KI L G +V DD Sbjct: 500 KTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEESLALTDKIEESLVGAGYEVLVDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P++V VG K ++ VE+K + +G Sbjct: 560 ERVGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKASG 597 >gi|77412297|ref|ZP_00788612.1| prolyl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|77161644|gb|EAO72640.1| prolyl-tRNA synthetase [Streptococcus agalactiae CJB111] Length = 617 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 136/214 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVT 214 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 94/159 (59%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + + MG YGIG R+++AVIE Sbjct: 440 ARGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P+ +APF + LI + DQ +D EKI A L G +V DD Sbjct: 500 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + +G Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASG 597 >gi|308235415|ref|ZP_07666152.1| prolyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018] gi|311114822|ref|YP_003986043.1| proline--tRNA ligase [Gardnerella vaginalis ATCC 14019] gi|310946316|gb|ADP39020.1| proline--tRNA ligase [Gardnerella vaginalis ATCC 14019] Length = 602 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 139/215 (64%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ FL L+E+P DA++ S KLM R G I + + G+++WLPLG K L+ V AIIREE N Sbjct: 2 SQLFLRTLREDPADADVTSAKLMQRAGYIRKSAPGVWTWLPLGLKVLNKVQAIIREEING 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L + + + R++ YG + RL DR++ + PTHEEV T + + Sbjct: 62 IGAQEVHFPALLPREPYEATNRWEEYGDNIFRLKDRHEADYLLAPTHEEVFTLLVKDMYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+M+DAYSF + +G K +Y + +Y R Sbjct: 122 SYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMQDAYSFSIDEDGLKSAYVEERAAYAR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RLG+K + + A SGP+GG S EF+ GE Sbjct: 182 IFDRLGIKYVIVHAVSGPMGGSDSEEFLAPMAIGE 216 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 83/143 (58%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + + +GK V MG YGIG RV+A + E+ HD G+ Sbjct: 436 RGVEIGQVFQLGLKYSKALGLSVLNENGKAVPVWMGCYGIGVSRVIACLAETHHDDAGLA 495 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP ++AP ++ ++ DQV DA EK+ LSK G +V +DD + G +F A+L+ Sbjct: 496 WPMAIAPAQVHVVAT-GKDQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFKDAELV 554 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL + G V++ +EI+ R Sbjct: 555 GVPLIAVAGRDTVNNGTIEIRDR 577 >gi|111658322|ref|ZP_01409011.1| hypothetical protein SpneT_02000512 [Streptococcus pneumoniae TIGR4] Length = 612 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/206 (46%), Positives = 133/206 (64%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E + GA+ Sbjct: 3 IPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQEFEKIGAV 62 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R +KSY+ Sbjct: 63 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 122 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ +Y RIF R Sbjct: 123 LPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYERIFTR 182 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVL 213 GL + + G +GG S EF+ + Sbjct: 183 SGLDFKAIIGDGGAMGGKDSQEFMAI 208 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AV+E Sbjct: 435 ARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVN 494 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + EK+ A L G +V DD Sbjct: 495 KTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRN 554 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P+++ VG K +D VE+K + TG Sbjct: 555 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATG 592 >gi|25011939|ref|NP_736334.1| prolyl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|81845546|sp|Q8E362|SYP_STRA3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|24413481|emb|CAD47559.1| prolyl-tRNA synthetase [Streptococcus agalactiae NEM316] Length = 617 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 136/214 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVT 214 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 94/159 (59%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + + MG YGIG R+++AVIE Sbjct: 440 ARGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P+ +APF + LI + DQ +D EKI A L G +V DD Sbjct: 500 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + +G Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASG 597 >gi|119717421|ref|YP_924386.1| prolyl-tRNA synthetase [Nocardioides sp. JS614] gi|152112937|sp|A1SLL4|SYP_NOCSJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119538082|gb|ABL82699.1| prolyl-tRNA synthetase [Nocardioides sp. JS614] Length = 589 Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 101/225 (44%), Positives = 141/225 (62%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F+ L+E+P DAE+ SH+L++R G I + + GIY+WLPLG + L + +IREE Sbjct: 3 MRMSSLFVRTLREDPADAEVPSHRLLVRAGYIRRAAPGIYTWLPLGLRVLRKIENVIREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA EM P L + + + R+ YG + RL DR + GPTHEE+ T + + Sbjct: 63 MDAIGAQEMLFPALLPREPYEATNRWTEYGDGIFRLQDRKGADYLLGPTHEEMFTLVVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY K + Sbjct: 123 LYSSYKDLPLSIYQIQTKYRDEARPRAGLLRGREFVMKDSYSFDVDDAGLDVSYQKHRDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 Y+RIF RLG + + + A SG +GG S EF+ A GE T V C+ Sbjct: 183 YVRIFDRLGFEYVIVEAMSGAMGGSKSEEFLAKASVGEDTYVRCT 227 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 91/160 (56%), Gaps = 3/160 (1%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +ARGIE+GHIF G KY+ + GK V MGSYGIG R VAA+ E +HD G Sbjct: 424 TARGIEMGHIFQLGRKYADALDLKVLDEQGKLVTVTMGSYGIGPSRAVAAIAEGTHDELG 483 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVAD 396 + WP VAP + ++ + V A E+I L K G +V +DD + G +F A+ Sbjct: 484 LAWPREVAPADVHIVATGKDEHVFA-AAERIAHELDKQGVEVLYDDRPKVSPGVKFKDAE 542 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+G P V+VG K ++ +E+K R TG R+D+ + +++ Sbjct: 543 LIGVPTIVVVG-KGLAAGTIEVKDRRTGQRQDVPADHLVD 581 >gi|124025277|ref|YP_001014393.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] gi|152112940|sp|A2C0W8|SYP_PROM1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|123960345|gb|ABM75128.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] Length = 596 Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 101/229 (44%), Positives = 145/229 (63%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +A+I SH+L++R G I + + GIY+++PL K L + +I+ EE Sbjct: 1 MRVSRLMLNTLRDVPSEADIISHQLLVRGGYIKRITGGIYAYMPLLWKVLKKITSIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + G ++ +P LQ +++W SGR+ SY + M L DR K + GPTHEEV+T I Sbjct: 61 LSTKGCLQTLLPQLQPSEIWERSGRWKSYTQGEGIMFSLKDRQGKELGLGPTHEEVITQI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 I SY+ LP +QIQ KFRDE+RPRFG+MRSREF+MKDAYSF + +Y+ M Sbjct: 121 ISQTIHSYKQLPINIFQIQTKFRDEIRPRFGLMRSREFIMKDAYSFHANENDLQSTYSDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y IF + GL + + A+SG IGG S EF+V A++GE + S D Sbjct: 181 RNAYQNIFTKCGLDFVCVDADSGAIGGAASQEFMVTAESGEDLILISSD 229 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 98/170 (57%), Gaps = 5/170 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 RGIE+GHIF GTKYS ++ATF G + ++ MG YGIG R+ A +E +HD GI Sbjct: 429 CRGIEIGHIFQLGTKYSKSLNATFTNEKGIEDHLWMGCYGIGISRLAQAAVEQNHDDLGI 488 Query: 339 IWPDSVAPFKI--SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 IWP S+APF + + NIK +DQ C E IY +L + DV DD ++ G +F AD Sbjct: 489 IWPTSIAPFTVIIIIANIKNNDQKC--LAEDIYQKLIQNRVDVLLDDRDDRAGIKFKDAD 546 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 L+G P +++ G + S VE+ +R T E + L V+ S F+ + Sbjct: 547 LIGIPWRIVAGRE-ASSGLVELHNRKTKTTELLDLNSVLKKLSEEFNTEK 595 >gi|256371437|ref|YP_003109261.1| prolyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331] gi|256008021|gb|ACU53588.1| prolyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331] Length = 572 Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 95/218 (43%), Positives = 146/218 (66%), Gaps = 1/218 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +E+PRDAE+ASH+L++R G + + G++S LPLG + L+ + AI+ EE Sbjct: 1 MRASDLVFATQREDPRDAEVASHRLLVRGGYMRALASGVWSLLPLGFRVLERIGAIVAEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G ++ +P L +LW E+GR + ++R+ D +++ GPTHEE + Sbjct: 61 FDRAGGNQLLLPALHPVELWQETGRNVTMDDVLMRV-DSKLGSLVLGPTHEEAVIAAVGP 119 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP YQIQ KFRDE R RFG+MR+REF+M D Y+FD+ E + SY +++ + Sbjct: 120 DLASYRSLPAFVYQIQTKFRDEPRARFGLMRTREFVMADGYTFDVDREHMRVSYQRVYEA 179 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 YLR++ RLGLK++P+ A++G IGGD++HEF+V + GE Sbjct: 180 YLRVYRRLGLKAVPVEADAGAIGGDVNHEFMVPSAIGE 217 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/156 (35%), Positives = 84/156 (53%), Gaps = 2/156 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMS-ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +EVGH F G YS MS TF G DG H MG YGIG R++A + E G+ Sbjct: 402 RAVEVGHTFQLGQLYSSRMSRGTFVGEDGATHPFWMGCYGIGVSRLIAVIAEEYQRDGGL 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP +APF+++++ + D V A I L ++G V +D G G +L+ Sbjct: 462 AWPLEIAPFQVAVVPAGSSDDVAATAA-NIAEELERMGRRVLLEDRGLSFGVAARDQELV 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL V+VG++ ++ +VE+++R+ G + L +V Sbjct: 521 GAPLWVVVGARSLARGEVELRNRVDGRTLTVQLRDV 556 >gi|283458510|ref|YP_003363138.1| prolyl-tRNA synthetase [Rothia mucilaginosa DY-18] gi|283134553|dbj|BAI65318.1| prolyl-tRNA synthetase [Rothia mucilaginosa DY-18] Length = 624 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 138/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S F+ L+E+P DAE+ASHKL++R G I + + G+Y+WLPLG K L V IIREE Sbjct: 17 LRLSNLFVRTLREDPVDAEVASHKLLVRAGYIRRAAPGVYTWLPLGLKVLRKVENIIREE 76 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ P L + + + R+D YG + RL DR M+ PTHEE+ T + + Sbjct: 77 MDAIGAQEVHFPALLPREPYEATNRWDEYGDNLFRLKDRKGADMLLAPTHEEMFTLLVKD 136 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF++ EG +Y + Sbjct: 137 LYSSYKDLPVYLYQIQTKYRDEARPRAGLLRGREFVMKDSYSFNIDDEGLNEAYMAHRAA 196 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ + + A+SG +GG S EF+ GE Sbjct: 197 YQRIFERLGLEIVIVTAQSGAMGGSRSEEFLHPTPIGE 234 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 3/160 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V+ARGIE+GHIF G KY+ + +GK V MGSYG+G R +AA+ E +HD K Sbjct: 457 VAARGIEMGHIFALGRKYAEALGLKVLDQNGKLQTVTMGSYGVGVTRALAAIAEGNHDEK 516 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVA 395 G+IWP ++AP + ++ I D + E++ A L G V DD + G +F A Sbjct: 517 GLIWPRNLAPADVHIV-ITGKDAASHEYAEELSASLESAGLQVMLDDRPKTSPGVKFGDA 575 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +LLG P +++G F D +E+K R +G ++S+E + Sbjct: 576 ELLGVPTILVIGRGF-KDGVLELKDRRSGEAREVSVENAV 614 >gi|255326388|ref|ZP_05367472.1| proline--tRNA ligase [Rothia mucilaginosa ATCC 25296] gi|255296605|gb|EET75938.1| proline--tRNA ligase [Rothia mucilaginosa ATCC 25296] Length = 610 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 138/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S F+ L+E+P DAE+ASHKL++R G I + + G+Y+WLPLG K L V IIREE Sbjct: 3 LRLSNLFVRTLREDPVDAEVASHKLLVRAGYIRRAAPGVYTWLPLGLKVLRKVENIIREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ P L + + + R+D YG + RL DR M+ PTHEE+ T + + Sbjct: 63 MDAIGAQEVHFPALLPREPYEATNRWDEYGDNLFRLKDRKGADMLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF++ EG +Y + Sbjct: 123 LYSSYKDLPVYLYQIQTKYRDEARPRAGLLRGREFVMKDSYSFNIDDEGLNEAYMAHRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ + + A+SG +GG S EF+ GE Sbjct: 183 YQRIFERLGLEIVIVTAQSGAMGGSRSEEFLHPTPIGE 220 Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 3/160 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V+ARGIE+GHIF G KY+ + +GK V MGSYG+G R +AA+ E +HD K Sbjct: 443 VAARGIEMGHIFALGRKYAEALGLKVLDQNGKLQTVTMGSYGVGVTRALAAIAEGNHDEK 502 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVA 395 G+IWP ++AP + ++ I + + E++ A L G V DD + G +F A Sbjct: 503 GLIWPRNLAPADVHIV-ITGKEAASHEYAEELSASLESAGLQVMLDDRPKTSPGVKFGDA 561 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +LLG P +++G F D +E+K R +G ++S+E + Sbjct: 562 ELLGVPTILVIGRGF-KDGVLELKDRRSGEAREVSVENAV 600 >gi|270284377|ref|ZP_05966008.2| proline--tRNA ligase [Bifidobacterium gallicum DSM 20093] gi|270276752|gb|EFA22606.1| proline--tRNA ligase [Bifidobacterium gallicum DSM 20093] Length = 602 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 138/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R G + + + GI++WLPLG L+ + AIIREE Sbjct: 5 LRMSSLFLRTLREDPADADVDSDKLLQRAGYLRKAAPGIWTWLPLGLSVLNKIEAIIREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P L + + R++ YG+ + RL DR++ + PTHEE+ T + + Sbjct: 65 MNGIGAQEVHFPALLPRAPYEATHRWEEYGENLFRLKDRHEADYLLAPTHEEMFTLLVKD 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG K Y + + Sbjct: 125 MYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDEEGMKRCYMEERAA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RL L+ +P+ A SGP+GG S EF+ GE Sbjct: 185 YERIFQRLDLQYVPVFAMSGPMGGSASEEFLAPLAIGE 222 Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 2/166 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + ES HD +G+ Sbjct: 437 RGVEIGQVFQLGLKYSEALGLNVLNQNGKSVPVWMGCYGIGVSRVLACIAESHHDERGLA 496 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP ++AP ++ ++ D+ +A EK+ A L G +V +DD + G +F A+L+ Sbjct: 497 WPANIAPAQVHVVAT-GKDEAAFEAAEKLVAELEARGVEVIFDDRKKVSPGVKFKDAELI 555 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL + G V+D +E++ R ++ + E + R +N Sbjct: 556 GVPLIAVAGRDTVNDGTIEVRLRDGSDKQAVPAETAAQVIADRVAN 601 >gi|311064741|ref|YP_003971466.1| prolyl-tRNA synthetase ProS [Bifidobacterium bifidum PRL2010] gi|310867060|gb|ADP36429.1| ProS Prolyl-tRNA synthetase [Bifidobacterium bifidum PRL2010] Length = 616 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 140/218 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA+ S KL+LR G + + + GI++WLPLG K L+ + AI+REE Sbjct: 16 LRMSTMFLRTLREDPADADTDSAKLLLRAGYVRKAAPGIWTWLPLGLKVLNKIEAIVREE 75 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ P L + + + R++ YG+ + RL DR++ + PTHEE+ T + + Sbjct: 76 IDGIGAQEVHFPALLPREPYEATHRWEEYGENLFRLKDRHEADYLLAPTHEEMFTLLVKD 135 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG K +Y + Sbjct: 136 MYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTIDEEGMKKAYYDERGA 195 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RL LK +P+ A SGP+GG S EF+ GE Sbjct: 196 YERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMAIGE 233 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD +G+ Sbjct: 448 RGVEIGQVFQLGLKYSKALDLKVLDQNGKTVPVWMGCYGIGVSRVLACIAETHHDERGLA 507 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP ++ ++ D DA EK+ A L + G +V +DD + G +F A+L+ Sbjct: 508 WPAVIAPAQVHVVAT-GKDAAAFDAAEKLVAELEERGIEVIYDDRKKVSPGVKFKDAELI 566 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL + G V++ +EI++R Sbjct: 567 GVPLIAVAGRDTVNNGTIEIRNR 589 >gi|296139421|ref|YP_003646664.1| prolyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] gi|296027555|gb|ADG78325.1| prolyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] Length = 585 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 137/217 (63%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G + + + G+YSWLPLG + L NV ++REE Sbjct: 4 RFSQLFLRTLRDDPADAEVPSHKLLVRAGYVRRIAPGVYSWLPLGLRVLRNVEHVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ +P L + + + R+ YG + RL DR M+ GPTHEE+ + Sbjct: 64 NAIGGQEILLPALLPREPYETTNRWTEYGDSLFRLQDRKGADMMLGPTHEEIFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD + EG +Y K +Y Sbjct: 124 YNSYKDLPVILYQIQNKYRDEERPRAGILRGREFVMKDSYSFDTSDEGLSEAYAKHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RL ++ + + A SG +GG S EF+ ++ GE Sbjct: 184 QRIFARLAIEHVIVSATSGAMGGSASEEFLAVSPVGE 220 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/158 (40%), Positives = 87/158 (55%), Gaps = 4/158 (2%) Query: 269 DSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D+ P+ + VSARGIE+GHIF G KY+ G +GK + GSYGIG R+VA Sbjct: 411 DASPDGRGTLVSARGIEIGHIFQLGRKYTDAFEVDVLGENGKPVRLTQGSYGIGVSRLVA 470 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + E HD KG+ WP VAPF + ++ I D+ E + A L G V DD Sbjct: 471 VIAEQQHDDKGLRWPKGVAPFDVHVV-IANKDEGAWTGAESLAAELDAAGLQVLLDDRKA 529 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 G +F ++LLG P V+VG + +D VE++ RLTG Sbjct: 530 SPGIKFKDSELLGVPTVVVVGRGW-ADGVVELRDRLTG 566 >gi|306826599|ref|ZP_07459905.1| proline--tRNA ligase [Streptococcus pyogenes ATCC 10782] gi|304431207|gb|EFM34210.1| proline--tRNA ligase [Streptococcus pyogenes ATCC 10782] Length = 618 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 136/213 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMSSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI 213 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 99/170 (58%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIEVGHIF GT+YS M AT +G+ + MG YGIG R+++AVIE Sbjct: 440 ARGIEVGHIFKLGTRYSDSMGATILDENGRTVPIVMGCYGIGVSRILSAVIEQHARLFVN 499 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P +APF + LI + DQV +D K+ A L G DV DD Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++GS+F+ +DL+G P++V VG K ++ VEIK + TG +++ E +I Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLI 608 >gi|116100417|gb|ABJ65563.1| Prolyl-tRNA synthetase [Streptococcus thermophilus LMD-9] Length = 615 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 94/207 (45%), Positives = 135/207 (65%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +P L+E P DA++ SH LM+R G + Q S GIY+++PL +A++ I+REE + GA Sbjct: 2 LIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKTIMREEFEKIGA 61 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 +EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R +KSY+ Sbjct: 62 VEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTVLVRDAVKSYK 121 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP YQIQ K+RDE RPR G++R+REF+MKDAYSF E +Y +Y IF Sbjct: 122 QLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDAYSFHQNYEDLDVTYEDYRKAYEAIFT 181 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVL 213 R GL+ + + G +GG S EF+ + Sbjct: 182 RAGLEFKAIIGDGGAMGGKDSQEFMAV 208 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AVIE Sbjct: 435 ARGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVSRILSAVIEQHARLFVN 494 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +AP+ + LI + D+ +++ A L+ G DV DD Sbjct: 495 KTPKGQYRYAWGINFPKELAPYDVHLITVNTKDEEANALTDRLEAALAAEGYDVLIDDRN 554 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + TG Sbjct: 555 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATG 592 >gi|312277616|gb|ADQ62273.1| Prolyl-tRNA synthetase [Streptococcus thermophilus ND03] Length = 615 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 94/207 (45%), Positives = 135/207 (65%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +P L+E P DA++ SH LM+R G + Q S GIY+++PL +A++ I+REE + GA Sbjct: 2 LIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKTIMREEFEKIGA 61 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 +EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R +KSY+ Sbjct: 62 VEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTVLVRDAVKSYK 121 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP YQIQ K+RDE RPR G++R+REF+MKDAYSF E +Y +Y IF Sbjct: 122 QLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDAYSFHQNYEDLDVTYEDYRKAYEAIFT 181 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVL 213 R GL+ + + G +GG S EF+ + Sbjct: 182 RAGLEFKAIIGDGGAMGGKDSQEFMAV 208 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + MG YGIG R+++AVIE Sbjct: 435 ARGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVSRILSAVIEQHARLFVN 494 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +AP+ + LI + D+ +++ A L+ G DV DD Sbjct: 495 KTPKGQYRYAWGINFPKELAPYDVHLITVNTKDEEANALTDRLEAALAAEGYDVLIDDRN 554 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + TG Sbjct: 555 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATG 592 >gi|331698443|ref|YP_004334682.1| Prolyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] gi|326953132|gb|AEA26829.1| Prolyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] Length = 577 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 97/215 (45%), Positives = 135/215 (62%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+E+P DAE+ SHKL++R G + + + G+YSWLPLG + L + I+REE + Sbjct: 2 SSLFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGVYSWLPLGLRVLRRIEEIVREEMDA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L D + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 62 IGAQEIQFPALLPRDPYESTNRWTEYGPNLFRLKDRKGNDYLLGPTHEELFTLAVKGEYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFDL+ EG SY +Y++ Sbjct: 122 SYKDYPVILYQIQNKYRDEERPRAGILRGREFLMKDSYSFDLSDEGLSESYALHRKAYVK 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 +F RL L+ + + A SG +GG S EF+ A+TGE Sbjct: 182 VFDRLSLRYVIVSATSGAMGGSASEEFLAEAETGE 216 Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 96/160 (60%), Gaps = 2/160 (1%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE+GHIF G KY+ G D K + MGSYGIG R+VA + E SHD G Sbjct: 413 SARGIEIGHIFQLGRKYTNAFGLDALGPDSKPVRITMGSYGIGVSRLVAVIAEQSHDESG 472 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 ++WP +V+P+ + ++ ++++ EK+ A L G V DD G +FA A+L Sbjct: 473 LVWPRAVSPYDVHVVVAGKNEEITA-GGEKLAAELEAAGLSVLLDDRKASPGVKFADAEL 531 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +G P V+VG + ++D K+E+K R +G RE+++L+ + + Sbjct: 532 VGVPTIVVVG-RGLADGKIEVKDRRSGEREEIALDGAVAH 570 >gi|297243824|ref|ZP_06927754.1| prolyl-tRNA synthetase [Gardnerella vaginalis AMD] gi|296888245|gb|EFH26987.1| prolyl-tRNA synthetase [Gardnerella vaginalis AMD] Length = 604 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 139/215 (64%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ FL L+E+P DA++ S KLM R G I + + G+++WLPLG K L+ V AIIREE N Sbjct: 2 SQLFLRTLREDPADADVTSAKLMQRAGYIRKSAPGVWTWLPLGLKVLNKVQAIIREEING 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L + + + R++ YG + RL DR++ + PTHEEV T + + Sbjct: 62 IGAQEVHFPALLPREPYEATNRWEEYGDNIFRLKDRHEADYLLAPTHEEVFTLLVKDMYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+M+D YSF + +G K +Y + +Y R Sbjct: 122 SYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMQDGYSFSIDEDGLKSAYVEERAAYAR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RLG+K + + A SGP+GG S EF+ GE Sbjct: 182 IFNRLGIKYVIVHAVSGPMGGSDSEEFLAPMPIGE 216 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 83/143 (58%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + + +GK V MG YGIG RV+A + E+ HD G+ Sbjct: 436 RGVEIGQVFQLGLKYSKALGLSVLNENGKAVPVWMGCYGIGVSRVIACLAETHHDDAGLA 495 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP ++AP ++ ++ DQV DA EK+ LSK G +V +DD + G +F A+L+ Sbjct: 496 WPMAIAPAQVHVVAT-GKDQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFKDAELV 554 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL + G V++ +EI+ R Sbjct: 555 GVPLIAVAGRDTVNNGTIEIRDR 577 >gi|317125361|ref|YP_004099473.1| prolyl-tRNA synthetase [Intrasporangium calvum DSM 43043] gi|315589449|gb|ADU48746.1| prolyl-tRNA synthetase [Intrasporangium calvum DSM 43043] Length = 588 Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 139/223 (62%), Gaps = 1/223 (0%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+E+P DAE+ SH+L++R G I + S G+Y+WLPLG + L NV I+REE + Sbjct: 6 SSLFLRTLREDPADAEVPSHRLLVRAGYIRRVSPGVYTWLPLGLRVLRNVERIVREEMDA 65 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L + + SGR+ YG + RL DR + GPTHEE+ T + Sbjct: 66 IGAQELLFPALLPREPFDASGRWAEYGDNIFRLQDRKGADHLLGPTHEEMFTLTVKDLYS 125 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY +Y+R Sbjct: 126 SYKDLPLSIYQIQTKYRDEARPRAGLLRGREFVMKDSYSFDIDEAGLDKSYQAHRDAYVR 185 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 IF RLG + + A +G +GG S EF+ A+ GE T V C+ Sbjct: 186 IFDRLGFHYVIVEAMAGAMGGSKSEEFLATAEVGEDTYVHCTN 228 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 5/174 (2%) Query: 266 KLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + D P V ARGIE+GH+F G KY+ + +GK V MGSYG+G R Sbjct: 408 RFGDPCPNCDHVLEGARGIEMGHVFQLGKKYAEALDLRVLDQNGKLTTVVMGSYGVGVSR 467 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 VA V+E ++D GIIWP + P + ++ + + R A + I L G DD Sbjct: 468 AVACVVEGNYDDSGIIWPRELTPADVHIVAAGKDEPLFR-AADDIARDLEAHGLTCIVDD 526 Query: 384 -MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G G +F ++L+G P ++VG + ++D KVEIK R +G R +++L+ V+ Sbjct: 527 RKGVSPGVKFKDSELIGVPTIIVVG-RGLADGKVEIKDRRSGERREVALDSVVE 579 >gi|300743963|ref|ZP_07072983.1| proline--tRNA ligase [Rothia dentocariosa M567] gi|300380324|gb|EFJ76887.1| proline--tRNA ligase [Rothia dentocariosa M567] Length = 605 Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 98/218 (44%), Positives = 138/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S F+ L+E+P DAE+ASHKL++R G I + + G+Y+WLPLG K L V I+REE Sbjct: 3 LRLSNLFVRTLREDPVDAEVASHKLLVRAGYIRRAAPGVYTWLPLGLKVLRKVENIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P L + + + R++ YG + RL DR M+ PTHEE+ T + + Sbjct: 63 MNAIGAQEVLFPALLPREPYEATNRWEEYGDNLFRLQDRKGADMLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF + EG +Y + Sbjct: 123 LYSSYKDLPLYIYQIQNKYRDEARPRAGLLRGREFVMKDSYSFTVDDEGLNEAYEAHRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF+RLGL ++ + A+SG +GG S EF+ GE Sbjct: 183 YQRIFNRLGLDTVIVTAQSGAMGGSRSEEFLHPTPVGE 220 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/160 (36%), Positives = 90/160 (56%), Gaps = 3/160 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 ++ARGIE+GHIF G KY+ + +GK V MGSYGIG R +AA+ E +HD K Sbjct: 439 IAARGIEMGHIFQLGRKYAEALGLKVLDQNGKLQTVTMGSYGIGVTRALAAIAEGNHDEK 498 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVA 395 G+IWP ++AP + ++ I D + E + A L G V DD + G +F A Sbjct: 499 GLIWPRNLAPADVHIV-ITNKDAQSHEYAETLSAELEGAGVQVLLDDRLKTSPGVKFGDA 557 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +LLG P +++G F D +E+K R +G D+++ + + Sbjct: 558 ELLGVPTILVIGRGF-KDGTLELKDRRSGEARDIAVSDAV 596 >gi|291004232|ref|ZP_06562205.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 581 Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 98/217 (45%), Positives = 136/217 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SH+L++R G + + GIYSWLPLG + L N+ I+R+E Sbjct: 4 RMSTLFLRTLREDPADAEVPSHRLLVRAGYVRRIGPGIYSWLPLGLRVLRNIEEIVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 DAIGAQEIHFPALLPKEPYEATNRWTEYGPNLFRLKDRKGGDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFDL EG +SY +Y Sbjct: 124 YSSYKDYPVILYQIQTKYRDEERPRAGILRGREFVMKDSYSFDLDDEGLTNSYRLHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 +RIF R+GL+ + + A SG +GG S EF+ A TGE Sbjct: 184 IRIFDRVGLRYVIVAATSGAMGGSASEEFLAEAPTGE 220 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 97/165 (58%), Gaps = 2/165 (1%) Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 E V+ARGIE+GHIF G KY+ S G DGK + MGSYG+G R+VAA+ E S Sbjct: 412 EGTLVAARGIEIGHIFQLGRKYADAFSLDALGQDGKPKRITMGSYGVGVSRMVAAIAEQS 471 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 HD G++WP VAP + ++ I D+ R+ E++ A L G V DD G +F Sbjct: 472 HDELGLVWPREVAPADVHVV-IAGKDESVREGAERLAADLDAAGVRVLLDDRNASPGVKF 530 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 A A+L+G P ++VG K ++ VE+K R +G RE++ ++ + + Sbjct: 531 ADAELVGVPTILVVG-KGLAKGVVEVKDRRSGDREEVPVDGAVEH 574 >gi|329117585|ref|ZP_08246302.1| proline--tRNA ligase [Streptococcus parauberis NCFD 2020] gi|326907990|gb|EGE54904.1| proline--tRNA ligase [Streptococcus parauberis NCFD 2020] Length = 618 Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 103/253 (40%), Positives = 154/253 (60%), Gaps = 3/253 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG ++ +L +R+ I GPTHEE T + R Sbjct: 61 FDKIGAVEMLSPALLTADLWRESGRYETYGDDLYKLKNRDQSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHPDYEDLDIAYEDYRRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + + G +GG S EF+ + T E +D IPS + + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAI--TPERTDLDRWLVLDKSIPSVDEIPE 238 Query: 241 DII-SLNSIVEQW 252 D++ ++ + ++ W Sbjct: 239 DVLDAIKAELKAW 251 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 14/169 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------S 332 ARGIE+GHIF GT+YS + AT +G+ + MG YGIG R+++AVIE S Sbjct: 440 ARGIEIGHIFKLGTRYSDSLGATILDENGRAVPIVMGCYGIGVSRILSAVIEQHARLFVS 499 Query: 333 HDGKG-------IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 KG I +P +APF + LI + DQ ++ +I L G +V DD Sbjct: 500 KTPKGDYRFAWGINFPKELAPFDVHLITVNTKDQEAQELTNRIETDLMAKGYEVLTDDRN 559 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 E++GS+F+ +DL+G P++V VG K S+ VEIK + +G +++ E + Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEIKIKSSGASIEVNAENL 607 >gi|146319615|ref|YP_001199327.1| prolyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|146321813|ref|YP_001201524.1| prolyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|253752613|ref|YP_003025754.1| prolyl-tRNA synthetase [Streptococcus suis SC84] gi|253754439|ref|YP_003027580.1| prolyl-tRNA synthetase [Streptococcus suis P1/7] gi|253756372|ref|YP_003029512.1| prolyl-tRNA synthetase [Streptococcus suis BM407] gi|166980162|sp|A4W435|SYP_STRS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980163|sp|A4VXT8|SYP_STRSY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145690421|gb|ABP90927.1| Prolyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|145692619|gb|ABP93124.1| Prolyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|251816902|emb|CAZ52551.1| prolyl-tRNA synthetase [Streptococcus suis SC84] gi|251818836|emb|CAZ56679.1| prolyl-tRNA synthetase [Streptococcus suis BM407] gi|251820685|emb|CAR47447.1| prolyl-tRNA synthetase [Streptococcus suis P1/7] gi|292559230|gb|ADE32231.1| Prolyl-tRNA synthetase [Streptococcus suis GZ1] Length = 620 Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 135/213 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA + SH LMLR G + Q S GIYS+LPL + ++ I+REE Sbjct: 1 MKQSKMIIPTLREMPSDASVISHALMLRAGYVRQISAGIYSYLPLANRVIEKAKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ AIE P L SAD+W ESGRY++YG ++ +L +R I GPTHEE +T + R Sbjct: 61 FDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKNREGSDFILGPTHEETVTLLARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF + E +Y+ + Sbjct: 121 AVQSYKQLPLNIYQIQPKYRDEKRPRNGLLRGREFIMKDGYSFHASYESLDQTYDDYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL+ + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLEFKAIIGDGGAMGGKDSQEFMAI 213 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 441 ARGIEIGHIFKLGTRYSDSMNANILDENGRSMPIIMGCYGIGVSRLLSAVLEQHARLFVN 500 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + + I A L G +V DD Sbjct: 501 KTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRN 560 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P++V VG K +D VE+K + TG Sbjct: 561 ERVGVKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKGTG 598 >gi|311113213|ref|YP_003984435.1| proline--tRNA ligase [Rothia dentocariosa ATCC 17931] gi|310944707|gb|ADP41001.1| proline--tRNA ligase [Rothia dentocariosa ATCC 17931] Length = 605 Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 98/218 (44%), Positives = 138/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S F+ L+E+P DAE+ASHKL++R G I + + G+Y+WLPLG K L V I+REE Sbjct: 3 LRLSNLFVRTLREDPVDAEVASHKLLVRAGYIRRAAPGVYTWLPLGLKVLRKVENIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P L + + + R++ YG + RL DR M+ PTHEE+ T + + Sbjct: 63 MNAIGAQEVLFPALLPREPYEATNRWEEYGDNLFRLQDRKGADMLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF + EG +Y + Sbjct: 123 LYSSYKDLPLYIYQIQNKYRDEARPRAGLLRGREFVMKDSYSFTVDDEGLNEAYEAHRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF+RLGL ++ + A+SG +GG S EF+ GE Sbjct: 183 YQRIFNRLGLDTVIVTAQSGAMGGSRSEEFLHPTPVGE 220 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 59/160 (36%), Positives = 89/160 (55%), Gaps = 3/160 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 ++ARGIE+GHIF G KY+ + +GK V MGSYGIG R +AA+ E +HD K Sbjct: 439 IAARGIEMGHIFQLGRKYAEALGLKVLDQNGKLQTVTMGSYGIGVTRALAAIAEGNHDEK 498 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVA 395 G+IWP ++AP + ++ I D + E + A L G V DD + G +F A Sbjct: 499 GLIWPRNLAPADVHIV-ITNKDAQSHEYAETLSAELEGAGVQVLLDDRLKTSPGVKFGDA 557 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +LLG P +++G F D +E+K R G D+++ + + Sbjct: 558 ELLGVPTILVIGRGF-KDGTLELKDRRNGEARDIAVSDAV 596 >gi|302024530|ref|ZP_07249741.1| prolyl-tRNA synthetase [Streptococcus suis 05HAS68] Length = 620 Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 135/213 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA + SH LMLR G + Q S GIYS+LPL + ++ I+REE Sbjct: 1 MKQSKMIIPTLREMPSDASVISHALMLRAGYVRQISAGIYSYLPLANRVIEKAKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ AIE P L SAD+W ESGRY++YG ++ +L +R I GPTHEE +T + R Sbjct: 61 FDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKNREGSDFILGPTHEETVTLLARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF + E +Y+ + Sbjct: 121 AVQSYKQLPLNIYQIQSKYRDEKRPRNGLLRGREFIMKDGYSFHASYESLDQTYDDYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL+ + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLEFKAIIGDGGAMGGKDSQEFMAI 213 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 441 ARGIEIGHIFKLGTRYSDSMNANILDENGRSMPIIMGCYGIGVSRLLSAVLEQHARLFVN 500 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + + I A L G +V DD Sbjct: 501 KTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRN 560 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P++V VG K +D VE+K + TG Sbjct: 561 ERVGVKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKGTG 598 >gi|223933900|ref|ZP_03625863.1| prolyl-tRNA synthetase [Streptococcus suis 89/1591] gi|223897426|gb|EEF63824.1| prolyl-tRNA synthetase [Streptococcus suis 89/1591] Length = 620 Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 135/213 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA + SH LMLR G + Q S GIYS+LPL + ++ I+REE Sbjct: 1 MKQSKMIIPTLREMPSDASVISHALMLRAGYVRQISAGIYSYLPLANRVIEKAKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ AIE P L SAD+W ESGRY++YG ++ +L +R I GPTHEE +T + R Sbjct: 61 FDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKNREGSDFILGPTHEETVTLLARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF + E +Y+ + Sbjct: 121 AVQSYKQLPLNIYQIQSKYRDEKRPRNGLLRGREFIMKDGYSFHASYESLDQTYDDYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 Y IF R GL+ + + G +GG S EF+ + Sbjct: 181 YEAIFTRAGLEFKAIIGDGGAMGGKDSQEFMAI 213 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 14/170 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 441 ARGIEIGHIFKLGTRYSDSMNANILDENGRSMPIIMGCYGIGVSRLLSAVLEQHARLFVN 500 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + + I A L G +V DD Sbjct: 501 KTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRN 560 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++G +F+ +DL+G P++V VG K +D VE+K + TG ++ +++++ Sbjct: 561 ERVGVKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKGTGDTVEVHVDQLL 609 >gi|283783528|ref|YP_003374282.1| proline--tRNA ligase [Gardnerella vaginalis 409-05] gi|283441181|gb|ADB13647.1| proline--tRNA ligase [Gardnerella vaginalis 409-05] Length = 610 Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 98/218 (44%), Positives = 139/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S+ FL L+E+P DA++ S KLM R G I + + G+++WLPLG K L+ V AIIR+E Sbjct: 6 LRMSQLFLRTLREDPADADVTSAKLMQRAGYIRKSAPGVWTWLPLGLKVLNKVQAIIRDE 65 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P L + + + R++ YG + RL DR+ + PTHEEV T + + Sbjct: 66 INGIGAQEVHFPALLPREPYEATNRWEEYGDNIFRLKDRHQADYLLAPTHEEVFTLLVKD 125 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+M+D YSF + +G K +Y + + Sbjct: 126 MYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMQDGYSFSIDEDGLKSAYVEERAA 185 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLG+K + + A SGP+GG S EF+ GE Sbjct: 186 YARIFDRLGIKYVIVHAVSGPMGGSDSEEFLAPMPIGE 223 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 90/165 (54%), Gaps = 2/165 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + + +GK V MG YGIG RV+A + E+ HD G+ Sbjct: 443 RGVEIGQVFQLGLKYSKALGLSVLNENGKAVPVWMGCYGIGVSRVIACLAETHHDDAGLA 502 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP ++AP ++ ++ DQV DA EK+ LSK G +V +DD + G +F A+L+ Sbjct: 503 WPMAIAPAQVHVV-ATGKDQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFKDAELV 561 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G PL + G V++ +EI+ R E + ++E R S Sbjct: 562 GVPLIAVAGRDTVNNGTIEIRDRNGSNVEAVPVDEAAARIVERVS 606 >gi|269219602|ref|ZP_06163456.1| proline--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] gi|269210844|gb|EEZ77184.1| proline--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] Length = 594 Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 135/215 (62%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S F+ L+E+P DAE+ASH+L++R G I + + GIY+WLPLG + L + I+REE Sbjct: 2 SSLFVRTLREDPADAEVASHRLLVRAGYIRRAAPGIYTWLPLGLRVLRKIERIVREEMEA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G+ E+ P L + + SGR+ YG + +L DR + + PTHEE+ T + + Sbjct: 62 AGSQEVHFPALLPREPYEASGRWSDYGPTLFKLKDRKESDYLLAPTHEELFTLLVKDMYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP + YQIQ K+RDE RPR GV+RSREF+MKDAYSFD+ G SY M +Y R Sbjct: 122 SYKDLPLSLYQIQTKYRDEARPRAGVIRSREFVMKDAYSFDVDEAGLDASYAAMRSAYQR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RLGL + A SG +GG S EF+ + GE Sbjct: 182 IFARLGLPFVICSAVSGAMGGSRSEEFLFPCEIGE 216 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 3/144 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVGHIF G KY+ + + +GK V MGSYGIG RV+AA+ E +HDG+G+ Sbjct: 425 AKGIEVGHIFQLGRKYAKALGLSVLDENGKSRTVTMGSYGIGITRVLAALAEENHDGRGL 484 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 +WP SVAP + ++ D A E+I A L G +V DD + G +FA +L Sbjct: 485 MWPASVAPAHVHIVA-AGKDDALYAAAEEIAAGLEADGVEVLLDDRRKVSAGVKFADYEL 543 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 LG P V+VG + +++ VEI+ R Sbjct: 544 LGVPFGVVVG-RGLAEGLVEIRDR 566 >gi|269795644|ref|YP_003315099.1| prolyl-tRNA synthetase, family II [Sanguibacter keddieii DSM 10542] gi|269097829|gb|ACZ22265.1| prolyl-tRNA synthetase, family II [Sanguibacter keddieii DSM 10542] Length = 591 Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 97/218 (44%), Positives = 138/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S F+ L+E+P DAE+ASH+L++R G I + + GIY+WLPLG + L V A++REE Sbjct: 3 LRLSTLFVRTLREDPADAEVASHRLLVRAGYIRRAAPGIYTWLPLGLRVLAKVEAVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ P L + + +GR+ YG + RL DR D + PTHEE+ T + + Sbjct: 63 MQAAGAQEVHFPALLPREPYEATGRWTEYGPNLFRLKDRRDNDYLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T +Q+Q K+RDE RPR G++R REF+MKDAYSFD+ G + SY + Sbjct: 123 LYSSYKDLPVTLFQVQTKYRDEARPRAGLIRGREFVMKDAYSFDVDDAGLEASYLVQRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF RLGL+ + + A SG +GG S EF+ GE Sbjct: 183 YEKIFTRLGLEYVVVAATSGAMGGSRSEEFLHPTAIGE 220 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 3/147 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYGIG R +AA+ E++HD KG+ Sbjct: 426 ARGIEIGHIFQLGRKYADALGLKVLDVNGKQVTVTMGSYGIGVTRALAALAEANHDEKGL 485 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP VAP + ++ D A E I LS +V +DD + G +FA A+L Sbjct: 486 AWPAHVAPAHVHVVA-TGKDPAVFAAAETIAQELSAQRVEVLYDDRPKVSPGVKFADAEL 544 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTG 424 LG V+V + ++D VE++ R+ G Sbjct: 545 LGV-PLVVVVGRGLADGVVEVRPRVGG 570 >gi|328869252|gb|EGG17630.1| prolyl-tRNA synthetase [Dictyostelium fasciculatum] Length = 642 Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 147/223 (65%), Gaps = 2/223 (0%) Query: 3 RSKYFLPILQENPRDAEIA-SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 RSK F+P++++ P D E++ S LM +TGMI + S G+Y LPL Q+A++N+ II EE Sbjct: 77 RSKLFIPVVRDQPMDKEMSQSQLLMQKTGMIRRASLGMYMTLPLAQRAMENLIKIIDEEM 136 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G ++++P L S DLW ++GR+++ G E++++ DR ++ PTHEE+ T + + Sbjct: 137 QGVGGQKLTMPLLVSKDLWEKTGRWETTGAELIKVKDRKEEEYCLAPTHEEIFTSLVANE 196 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 S N P YQI K+RDE+RPRFG++R REFLMKD YSFD T + +YN + +Y Sbjct: 197 RLSNSNFPLRLYQIGNKYRDEIRPRFGLVRGREFLMKDLYSFDQTRVEAVATYNDIKGAY 256 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 R+F R+GLK + A+SG IGG +SHEF VL +GE T V C Sbjct: 257 HRVFDRVGLKYACVEADSGNIGGSMSHEFQVLTGSGEDTVVSC 299 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 12/173 (6%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIFY GTKYS + A K +GK+ ++MG YGIG R++AA+IES D +GI+ Sbjct: 469 QGIEVGHIFYLGTKYSSKLGANMKDKNGKNQPIEMGCYGIGVSRLLAAMIESKRDDRGIV 528 Query: 340 WPDSVAPFKISLINIKAHDQVCR---DACEKIYARLSK----VGCDVFWDDMGEQIGSQF 392 W VAP+K I I DQ R ++ E +Y L + V + + IG + Sbjct: 529 WSKCVAPYK--AIIIPFSDQRNRGSYESAEHLYDLLIRDPFLRNQIVLENRLDMSIGKRI 586 Query: 393 AVADLLGFPLQVIV---GSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 A+L+GFP + V SK + E++ R G + + E+ ++ ++F Sbjct: 587 NEANLIGFPYLIFVNNNASKKNGEDVFEVEDRDNGQKSYFTAFELYHFFRYQF 639 >gi|296394267|ref|YP_003659151.1| prolyl-tRNA synthetase [Segniliparus rotundus DSM 44985] gi|296181414|gb|ADG98320.1| prolyl-tRNA synthetase [Segniliparus rotundus DSM 44985] Length = 599 Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 104/247 (42%), Positives = 148/247 (59%), Gaps = 7/247 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+E+P DAE+A+HKL++R G + + S G+++WLPLG K L V A++REE Sbjct: 4 RLSELFVRTLREDPADAEVANHKLLVRGGYVRRVSPGVFTWLPLGLKVLRQVEAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + S R+ YG + RL DR + PTHEE+ I + Sbjct: 64 DAIGAQEILLPALAPRQPYETSNRWTEYGDNLFRLKDRKGGDYLLAPTHEELFALIVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKDAYSFD+ G+K +Y+ +Y Sbjct: 124 YTSYKDLPVILYQIQTKYRDEERPRAGILRGREFVMKDAYSFDVDEAGNKAAYHAHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPI------PS 234 RIF RLG+ + + A SG +GG S EF+ + GE T V C + + P+ Sbjct: 184 QRIFDRLGVSYVIVAATSGAMGGSASEEFLAESAIGEDTYVRCLESGYAANVEAVATPPA 243 Query: 235 ENTDFDD 241 E DF D Sbjct: 244 EPVDFSD 250 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 63/169 (37%), Positives = 88/169 (52%), Gaps = 3/169 (1%) Query: 258 ATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T D + D P+ + V+ARGIE+GH+F GTKY+ S G +GK + MG Sbjct: 394 GTIDAAEVREGDPSPDGRGPLVAARGIEIGHVFALGTKYTDAFSVDVLGENGKPARLIMG 453 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+V + E D KG+ WP VAPF++ +++ A S Sbjct: 454 SYGIGVSRLVGVIAEQWLDEKGLRWPPQVAPFQVHVLSTGKGGAEAEAAERYAAELESH- 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 G V DD G +FA A+LLG P+ V+VG + + KVE+K R +G Sbjct: 513 GLRVLLDDRKASPGVKFADAELLGAPVVVVVGRDWAGEGKVELKERFSG 561 >gi|227495079|ref|ZP_03925395.1| proline--tRNA ligase [Actinomyces coleocanis DSM 15436] gi|226831531|gb|EEH63914.1| proline--tRNA ligase [Actinomyces coleocanis DSM 15436] Length = 603 Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 96/215 (44%), Positives = 138/215 (64%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S +F+ L+E+P DAE+ SHKL++R G I + + GIY+WLPLG + L + ++REE + Sbjct: 6 SSFFVRTLREDPADAEVTSHKLLVRAGYIRRTAPGIYTWLPLGLQVLKRIEKVVREEMDA 65 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L A+ + ++ R++ YG + +L DR + PTHEE+ T + + Sbjct: 66 VGAQEVHFPALLPAEPYQKTNRWEEYGPTLFKLRDRKAADYLLAPTHEEMFTLLVKDMYS 125 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFD+ EG SY+ +Y R Sbjct: 126 SYKDLPVTLYQIQTKYRDEARPRAGLIRGREFVMKDAYSFDIDQEGLNTSYDLQRQAYQR 185 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RLGL+ + A SG +GG S EF+ + GE Sbjct: 186 IFERLGLEYVICSAMSGAMGGSRSEEFLHPCEIGE 220 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 3/169 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYG+G RV+AA+ ES +D G+ Sbjct: 433 ARGIEIGHIFQLGKKYAEALDLKVLDQNGKTQVVTMGSYGVGVSRVLAALAESCNDENGL 492 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP +APF + ++ +++ A I +S G DV +DD + G +FA A+L Sbjct: 493 AWPMILAPFHLQVLATGKGEELFETAG-SIAKAVSDAGFDVLYDDRPKVSAGVKFADAEL 551 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 LG P ++VG + + D VE++ R G ++ + E NR Sbjct: 552 LGMPYVLVVG-RGLKDGVVELRDRRNGTAVELPVAEASAEILRVLEENR 599 >gi|260771311|ref|ZP_05880237.1| prolyl-tRNA synthetase [Vibrio furnissii CIP 102972] gi|260613627|gb|EEX38820.1| prolyl-tRNA synthetase [Vibrio furnissii CIP 102972] Length = 541 Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 95/196 (48%), Positives = 131/196 (66%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI + + G+Y+WLP G + L V I+R+E +R GAIE +P +Q +LW E+GR + G Sbjct: 1 MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDRAGAIETLMPVVQPFELWEETGRSEKMG 60 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM 150 E+LR DR+ + + PT EEV+T + R+ + SY+ LP YQIQ KFRDE RPRFGVM Sbjct: 61 PELLRFTDRHVRPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRFGVM 120 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R+REF M DAYSFDL +G + SY+ M +Y + F R+GL P+ A+SG IGG+ S EF Sbjct: 121 RAREFSMMDAYSFDLDKQGLQKSYDAMHAAYCKAFDRMGLDYRPVLADSGAIGGNGSQEF 180 Query: 211 IVLADTGETQVFCSKD 226 VLA++GE + S + Sbjct: 181 HVLAESGEDLIVFSTE 196 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ + G DGK+ ++MG YGIG RVVAA IE ++D GII Sbjct: 377 RGIEVGHIFQLGTNYSEKMNCSVLGPDGKNVILEMGCYGIGVSRVVAAAIEQNNDKYGII 436 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + + A EK+YA LS G DV +DD E+ G F+ +L+ Sbjct: 437 WPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELSAAGIDVLFDDRKERPGVMFSDMELI 496 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P +++G + + + E K+R G + +++++++ + + + Sbjct: 497 GVPHTIVIGDRSMDEGNFEYKNRRNGEKTAIAIDQIVEHIKAQLA 541 >gi|296454700|ref|YP_003661843.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] gi|296184131|gb|ADH01013.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] Length = 604 Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 139/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE Sbjct: 6 LRMSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREE 65 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 66 INGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 125 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y + Sbjct: 126 MYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTIDEEGMRKAYYDERGA 185 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RL LK +P+ A SGP+GG S EF+ GE Sbjct: 186 YERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGE 223 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 2/165 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD G+ Sbjct: 438 RGVEIGQVFQLGLKYSKALDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLA 497 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP + ++ D V + EK+ A L G +V +DD + G +F A+L+ Sbjct: 498 WPSVIAPAAVHVVAT-GKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELI 556 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G PL +VG +V+D +EI+ R + + E + RF+ Sbjct: 557 GVPLIAVVGRDYVNDGTIEIRDRNGENKVAVPAAEAAGTLADRFA 601 >gi|298346548|ref|YP_003719235.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 43063] gi|298236609|gb|ADI67741.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 43063] Length = 623 Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 96/217 (44%), Positives = 140/217 (64%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + S +F+ L+E+P +AE+ SHKL++R G I + + GIY+WLPLG K L V I+REE Sbjct: 4 KMSSFFVRTLREDPVEAEVDSHKLLVRAGYIRRAAPGIYTWLPLGLKTLRRVENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G E+ P L S++ +V + R++ +G + +L DR + + PTHEE+ T + Sbjct: 64 DRIGGQELQFPMLLSSEPYVATNRWEEFGPSLFKLKDRKEGDYLLAPTHEEMFTLAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ++ K+RDE RPR G++R REF+MKD+YSFDLT +G +HSY +Y Sbjct: 124 YTSYKDLPVILYQMKEKYRDEARPRAGIIRGREFVMKDSYSFDLTDDGLEHSYALHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 R+F RLGL + A SGP+GG S EF+ GE Sbjct: 184 RRVFTRLGLDFVICHAMSGPMGGSASEEFLFPCAIGE 220 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 94/158 (59%), Gaps = 3/158 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ + + +GK V MGSYGIG R+VAA+ E +HD +G++ Sbjct: 434 RGIEIGHIFALGRKYAKALGLSVLDENGKSQVVTMGSYGIGVSRLVAAIAEENHDDRGLM 493 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP ++APF++ ++ ++ A EK+ +L G V +DD + G +F A+LL Sbjct: 494 WPLNIAPFQVHVLATGKDPEIFATA-EKLACQLDAAGLQVLYDDRPKASAGVKFKDAELL 552 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P ++VG K +++ KVEI+ R G ++ + E + Sbjct: 553 GMPYALVVG-KGLAEGKVEIRQRREGTTQETTPESCVE 589 >gi|218282600|ref|ZP_03488838.1| hypothetical protein EUBIFOR_01424 [Eubacterium biforme DSM 3989] gi|218216471|gb|EEC90009.1| hypothetical protein EUBIFOR_01424 [Eubacterium biforme DSM 3989] Length = 564 Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 98/221 (44%), Positives = 143/221 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F L+EN +D + S L++R GMI + S GIY +P+G+K L V IIREE Sbjct: 1 MKLSQSFFYTLRENAKDEDSVSSNLLVRAGMIKKCSNGIYMIMPMGKKVLSKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A E+ +P L D++V+SGR +++G M L+DR +K + GPTHEE+ Sbjct: 61 MDAKDAQELLMPALIPEDVYVQSGRREAFGSNMFSLSDRYNKRYVLGPTHEELFAVASSM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSY++ P+ YQIQ K+RDE RPR+G++R REF+MKDAY+FD+ G +YNKM+ + Sbjct: 121 DGKSYKDFPYNLYQIQTKYRDETRPRYGLIRVREFIMKDAYTFDVDEAGLDVAYNKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y RI RLGL+ ++A++G +GG LS E+ L+ GE V Sbjct: 181 YCRIMDRLGLEYKIVKADTGAMGGLLSEEYQALSSIGEDVV 221 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 1/163 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVG++F GTKYS M+ + A+ + V MGSYGIG R +AAV + HD GI W Sbjct: 402 GIEVGNLFKLGTKYSKSMNLYYTDANNQLQPVWMGSYGIGLERCMAAVADQHHDDFGIKW 461 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P +APF+++++ + D+ +Y + DV DD E+ G +F +L+G Sbjct: 462 PVEIAPFRLAIVPVSLKDEEQVKIANDLYEYCKEHKFDVILDDRNERPGVKFKDMELIGI 521 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 P ++ VG + V + K+E R TG + ++++E+V + F+ Sbjct: 522 PYRITVG-RGVKEGKLEWTDRYTGEKSEIAIEDVYSEIEKVFA 563 >gi|315657037|ref|ZP_07909922.1| proline--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492429|gb|EFU82035.1| proline--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 623 Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 96/217 (44%), Positives = 140/217 (64%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + S +F+ L+E+P +AE+ SHKL++R G I + + GIY+WLPLG K L V I+REE Sbjct: 4 KMSSFFVRTLREDPVEAEVDSHKLLVRAGYIRRAAPGIYTWLPLGLKTLRRVENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G E+ P L S++ +V + R++ +G + +L DR + + PTHEE+ T + Sbjct: 64 DRIGGQELQFPMLLSSEPYVATNRWEEFGPSLFKLKDRKEGDYLLAPTHEEMFTLAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ++ K+RDE RPR G++R REF+MKD+YSFDLT +G +HSY +Y Sbjct: 124 YTSYKDLPVILYQMKEKYRDEARPRAGIIRGREFVMKDSYSFDLTDDGLEHSYALHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 R+F RLGL + A SGP+GG S EF+ GE Sbjct: 184 RRVFTRLGLDFVICHAMSGPMGGSASEEFLFPCAIGE 220 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 94/158 (59%), Gaps = 3/158 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ + + +GK V MGSYGIG R+VAA+ E +HD +G++ Sbjct: 434 RGIEIGHIFALGRKYAKALGLSVLDENGKSQVVTMGSYGIGVSRLVAAIAEENHDDRGLM 493 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP ++APF++ ++ ++ A EK+ +L G V +DD + G +F A+LL Sbjct: 494 WPLNIAPFQVHVLATGKDPEIFATA-EKLACQLDAAGLQVLYDDRPKASAGVKFKDAELL 552 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P ++VG K +++ KVEI+ R G ++ + E + Sbjct: 553 GMPYALVVG-KGLAEGKVEIRQRREGTTQETTPESCVE 589 >gi|315655105|ref|ZP_07908007.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 51333] gi|315490586|gb|EFU80209.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 51333] Length = 623 Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 96/217 (44%), Positives = 140/217 (64%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + S +F+ L+E+P +AE+ SHKL++R G I + + GIY+WLPLG K L V I+REE Sbjct: 4 KMSSFFVRTLREDPVEAEVDSHKLLVRAGYIRRAAPGIYTWLPLGLKTLRRVENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G E+ P L S++ +V + R++ +G + +L DR + + PTHEE+ T + Sbjct: 64 DRIGGQELQFPMLLSSEPYVATNRWEEFGPSLFKLKDRKEGDYLLAPTHEEMFTLAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ++ K+RDE RPR G++R REF+MKD+YSFDLT +G +HSY +Y Sbjct: 124 YTSYKDLPVILYQMKEKYRDEARPRAGIIRGREFVMKDSYSFDLTDDGLEHSYALHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 R+F RLGL + A SGP+GG S EF+ GE Sbjct: 184 RRVFTRLGLDFVICHAMSGPMGGSASEEFLFPCAIGE 220 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 95/167 (56%), Gaps = 3/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ + + +GK V MGSYGIG R+VAA+ E +HD KG+I Sbjct: 434 RGIEIGHIFALGRKYAKALGLSVLDENGKSQVVTMGSYGIGVSRLVAAIAEENHDDKGLI 493 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP ++APF++ ++ ++ A EK+ +L G V +DD + G +F A+LL Sbjct: 494 WPLNIAPFQVHVLATGKDPEIFATA-EKLACQLDAAGLQVLYDDRPKASAGVKFKDAELL 552 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G P ++VG K +++ K+EI+ R G ++ + E + N Sbjct: 553 GMPYALVVG-KGLAEGKIEIRQRREGTTQETTPESCVEELLQAIENE 598 >gi|213691491|ref|YP_002322077.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522952|gb|ACJ51699.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457566|dbj|BAJ68187.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 604 Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 139/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE Sbjct: 6 LRMSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREE 65 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 66 INGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 125 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y + Sbjct: 126 MYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTIDEEGMRKAYYDERGA 185 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RL LK +P+ A SGP+GG S EF+ GE Sbjct: 186 YERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGE 223 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 79/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD G+ Sbjct: 438 RGVEIGQVFQLGLKYSKALDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLA 497 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP + ++ D V + EK+ + L G +V +DD + G +F A+L+ Sbjct: 498 WPSVIAPAAVHVVAT-GKDAVAFEGAEKLVSELEAKGLEVIYDDRKKVSPGVKFKDAELI 556 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL +VG +V+D +E++ R Sbjct: 557 GVPLVAVVGRDYVNDGTIELRDR 579 >gi|304389734|ref|ZP_07371693.1| proline--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326910|gb|EFL94149.1| proline--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 623 Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 96/217 (44%), Positives = 140/217 (64%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + S +F+ L+E+P +AE+ SHKL++R G I + + GIY+WLPLG K L V I+REE Sbjct: 4 KMSSFFVRTLREDPVEAEVDSHKLLVRAGYIRRAAPGIYTWLPLGLKTLRRVENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G E+ P L S++ +V + R++ +G + +L DR + + PTHEE+ T + Sbjct: 64 DRIGGQELQFPMLLSSEPYVATNRWEEFGPSLFKLKDRKEGDYLLAPTHEEMFTLAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ++ K+RDE RPR G++R REF+MKD+YSFDLT +G +HSY +Y Sbjct: 124 YTSYKDLPVILYQMKEKYRDEARPRAGIIRGREFVMKDSYSFDLTDDGLEHSYALHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 R+F RLGL + A SGP+GG S EF+ GE Sbjct: 184 RRVFTRLGLDFVICHAMSGPMGGSASEEFLFPCAIGE 220 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 94/158 (59%), Gaps = 3/158 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ + + +GK V MGSYGIG R+VAA+ E +HD +G++ Sbjct: 434 RGIEIGHIFALGRKYAKALGLSVLDENGKSQVVTMGSYGIGVSRLVAAIAEENHDDRGLM 493 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP ++APF++ ++ ++ A EK+ +L G V +DD + G +F A+LL Sbjct: 494 WPLNIAPFQVHVLATGKDPEIFATA-EKLACQLDAAGLQVLYDDRPKASAGVKFKDAELL 552 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P ++VG K +++ KVEI+ R G ++ + E + Sbjct: 553 GMPYALVVG-KGLAEGKVEIRQRREGTTQETTPESCVE 589 >gi|312134020|ref|YP_004001359.1| pros [Bifidobacterium longum subsp. longum BBMN68] gi|311773326|gb|ADQ02814.1| ProS [Bifidobacterium longum subsp. longum BBMN68] Length = 604 Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 139/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE Sbjct: 6 LRMSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREE 65 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 66 INGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 125 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y + Sbjct: 126 MYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGA 185 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RL LK +P+ A SGP+GG S EF+ GE Sbjct: 186 YERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGE 223 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD G+ Sbjct: 438 RGVEIGQVFQLGLKYSKALDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLA 497 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP + ++ D V + EK+ A L G +V +DD + G +F A+L+ Sbjct: 498 WPSVIAPAAVHVVAT-GKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELI 556 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL +VG +V+D +E++ R Sbjct: 557 GVPLVAVVGRDYVNDGTIELRDR 579 >gi|322689774|ref|YP_004209508.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] gi|322691722|ref|YP_004221292.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456578|dbj|BAJ67200.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|320461110|dbj|BAJ71730.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] Length = 614 Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 139/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE Sbjct: 16 LRMSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREE 75 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 76 INGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 135 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y + Sbjct: 136 MYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGA 195 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RL LK +P+ A SGP+GG S EF+ GE Sbjct: 196 YERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGE 233 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD G+ Sbjct: 448 RGVEIGQVFQLGLKYSKALDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLA 507 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP + ++ D V + EK+ A L G +V +DD + G +F A+L+ Sbjct: 508 WPSVIAPAAVHVVAT-GKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELI 566 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL +VG +V+D +E++ R Sbjct: 567 GVPLVAVVGRDYVNDGTIELRDR 589 >gi|298252610|ref|ZP_06976404.1| prolyl-tRNA synthetase [Gardnerella vaginalis 5-1] gi|297532974|gb|EFH71858.1| prolyl-tRNA synthetase [Gardnerella vaginalis 5-1] Length = 603 Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 138/215 (64%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ FL L+E+P DA++ S KLM R G I + + G+++WLPLG K L+ V AIIR+E N Sbjct: 2 SQLFLRTLREDPADADVTSAKLMQRAGYIRKSAPGVWTWLPLGLKVLNKVQAIIRDEING 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L + + + R++ YG + RL DR+ + PTHEEV T + + Sbjct: 62 IGAQEVHFPALLPREPYEATNRWEEYGDNIFRLKDRHQADYLLAPTHEEVFTLLVKDMYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+M+DAYSF + +G K +Y + +Y R Sbjct: 122 SYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMQDAYSFSIDEDGLKSAYVEERAAYAR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RLG+K + + A SGP+GG S EF+ GE Sbjct: 182 IFDRLGIKYVIVHAVSGPMGGSDSEEFLAPMPIGE 216 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 84/143 (58%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + + +GK V MG YGIG RV+A + E+ HD G+ Sbjct: 436 RGVEIGQVFQLGLKYSKALGLSVLNENGKAVPVWMGCYGIGVSRVIACLAETHHDDAGLA 495 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP ++AP ++ ++ DQV DA EK+ LSK G +V +DD + G +F A+L+ Sbjct: 496 WPMAIAPAQVHVVAT-GKDQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFKDAELV 554 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL + G V++ +EI++R Sbjct: 555 GVPLIAVAGRDTVNNGTIEIRNR 577 >gi|296129352|ref|YP_003636602.1| prolyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] gi|296021167|gb|ADG74403.1| prolyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] Length = 597 Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 97/218 (44%), Positives = 134/218 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S F+ L+E+P DAE+ASH+L++R G I + + GIY+WLPLG + L V ++REE Sbjct: 3 LRMSTLFVRTLREDPADAEVASHRLLVRAGYIRRAAPGIYTWLPLGLRVLAKVEQVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ P L + + +GR+ YG + RL DR + PTHEE+ T + + Sbjct: 63 MAAIGAQEVHFPALLPKEPYEATGRWTEYGPNIFRLKDRKGGDYLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP YQIQ K+RDE RPR G++R REF+MKDAYSFD+ G SY + Sbjct: 123 LYSSYKDLPLALYQIQTKYRDEARPRAGLIRGREFVMKDAYSFDVDDAGLAASYEAQRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL+ + + A SG +GG S EF+ GE Sbjct: 183 YQRIFDRLGLEYVIVAATSGAMGGSRSEEFLTPTAIGE 220 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 3/154 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + T +GK V MGSYGIG RV+AA+ E++HD +G+ Sbjct: 429 ARGIEIGHIFQLGRKYAQALGLTVLDQNGKAQVVTMGSYGIGVTRVLAALAEANHDERGL 488 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP VAP + ++ D +A E + LS G +V +DD + G +FA A+L Sbjct: 489 AWPADVAPAHVHVLA-TGKDAAVFEAAEALATTLSARGVEVLYDDRPKVSPGVKFADAEL 547 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LG V+V + ++D VE++ R G E + + Sbjct: 548 LGV-PLVVVVGRGLADGVVEVRPRAGGTSEQVPV 580 >gi|189440768|ref|YP_001955849.1| prolyl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|189429203|gb|ACD99351.1| Prolyl-tRNA synthetase [Bifidobacterium longum DJO10A] Length = 604 Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 139/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE Sbjct: 6 LRMSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREE 65 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 66 INGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 125 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y + Sbjct: 126 MYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGA 185 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RL LK +P+ A SGP+GG S EF+ GE Sbjct: 186 YERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGE 223 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD G+ Sbjct: 438 RGVEIGQVFQLGLKYSKALDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLA 497 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP + ++ D V + EK+ A L G +V +DD + G +F A+L+ Sbjct: 498 WPSVIAPAAVHVVAT-GKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELI 556 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL +VG +V+D +E++ R Sbjct: 557 GVPLVAVVGRDYVNDGTIELRDR 579 >gi|239621659|ref|ZP_04664690.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515534|gb|EEQ55401.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 607 Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 139/218 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE Sbjct: 9 LRMSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREE 68 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 69 INGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 128 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y + Sbjct: 129 MYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGA 188 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RL LK +P+ A SGP+GG S EF+ GE Sbjct: 189 YERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGE 226 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD G+ Sbjct: 441 RGVEIGQVFQLGLKYSKALDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLA 500 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP + ++ D V + EK+ A L G +V +DD + G +F A+L+ Sbjct: 501 WPSVIAPAAVHVVAT-GKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELI 559 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL +VG +V+D +E++ R Sbjct: 560 GVPLVAVVGRDYVNDGTIELRDR 582 >gi|295396369|ref|ZP_06806535.1| proline--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] gi|294970809|gb|EFG46718.1| proline--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] Length = 609 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 94/218 (43%), Positives = 142/218 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S F+ L+E P DA++ SHKL+ R I + + GIY+WLPLG + LD V AI+R+E Sbjct: 3 LRMSTLFVRTLKEEPADADVKSHKLLHRASYIRRSAPGIYTWLPLGLRVLDKVEAIVRDE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G+ E+ P L A+ + +SGR++++G+ + RL DR + PTHEEV T + + Sbjct: 63 MSKAGSQEVHFPALLPAEPYEKSGRWEAFGEGIFRLQDRKKADYLLAPTHEEVFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQIQ K+RDE RPR G++R REF+MKDAYSFD G +Y KM + Sbjct: 123 LYSSYKDLPASLYQIQTKYRDEARPRAGLLRGREFIMKDAYSFDTDDAGLDAAYEKMRKA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y+ +++RL L + + A G +GG +HEF+ ++ GE Sbjct: 183 YINVYNRLQLPFVMVEATPGAMGGSGTHEFLYPSEVGE 220 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 84/147 (57%), Gaps = 3/147 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARG+E+G IF GT+Y+ + + +GK V MGSYGIG RV+A + E D KG+ Sbjct: 432 ARGVEIGQIFKLGTRYAEALGLSVLDENGKARVVTMGSYGIGVSRVLACIAEEHADDKGL 491 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 +WP ++AP + ++ QV D E++ A + K G V DD + G +F A+L Sbjct: 492 VWPANLAPADVHIVATGKDAQVF-DVAEELTAEVEKAGYTVLLDDRPKVSPGMKFGDAEL 550 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTG 424 LG P V+VG + + D VE++ R TG Sbjct: 551 LGMPTIVVVG-RGLKDGVVELRDRATG 576 >gi|225021160|ref|ZP_03710352.1| hypothetical protein CORMATOL_01172 [Corynebacterium matruchotii ATCC 33806] gi|224946067|gb|EEG27276.1| hypothetical protein CORMATOL_01172 [Corynebacterium matruchotii ATCC 33806] Length = 584 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 100/249 (40%), Positives = 143/249 (57%), Gaps = 19/249 (7%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+Y+WLPLG + L + ++REE Sbjct: 4 RLSSLFLRTLREDPADAEVPSHKLLVRAGYIRRAAPGVYTWLPLGLRTLRKIEKVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L S + + ++ R+ YG + RL DR M+ GPTHEE+ + Sbjct: 64 DHIGAQELLFPALLSREPYEQTRRWTEYGDNLFRLKDRKGNDMLLGPTHEEMFARQVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T G + SY +Y Sbjct: 124 FTSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMTDAGLEQSYLAHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-------------------TQVF 222 IF RL L+ +A SG +GG S EF+ ++ GE TQ Sbjct: 184 QAIFDRLNLEYAICKATSGAMGGSASEEFLAISPNGEDTFVRATEGDYAANVEAVTTQPG 243 Query: 223 CSKDFMDFP 231 ++DF + P Sbjct: 244 TTRDFTNLP 252 Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 5/156 (3%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ + V RGIE+GHIF G KY+ GK MGSYGIG R+V Sbjct: 409 DPAPDGQGVLTLERGIEIGHIFQLGRKYTEVFDVQILDEHGKRAIPTMGSYGIGVSRLVG 468 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + E HD G+ WP VAP+++ ++ + D+ A + I +L G +V +DD + Sbjct: 469 VIAEQHHDDNGLNWPVEVAPYQVHVV-VANKDKAALAAGDDIVVQLDAAGVEVLFDDRPK 527 Query: 387 -QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +F ++LLG P V++G F S+ VE++ R Sbjct: 528 VSPGVKFKDSELLGMPYIVVLGRSF-SNGIVELRIR 562 >gi|294790672|ref|ZP_06755830.1| proline--tRNA ligase [Scardovia inopinata F0304] gi|294458569|gb|EFG26922.1| proline--tRNA ligase [Scardovia inopinata F0304] Length = 598 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 107/271 (39%), Positives = 155/271 (57%), Gaps = 6/271 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+++P DA++ S KL++R G I + G+YSWLPLG + L+ + AIIREE Sbjct: 6 LRMSSLFLRTLRDDPADADVDSAKLLIRAGYIRKIGPGLYSWLPLGLRVLNKIEAIIREE 65 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P + + + S R++ YG + R DR+ + PTHEE+ T + + Sbjct: 66 INAIGAQEVHFPAMMPREPYQMSNRWEEYGDNIFRFKDRHGADYLLAPTHEEMFTLMVKD 125 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R R+F+MKDAYSFD+ EG K +Y + + Sbjct: 126 MYTSYKDLPVTLYQIQGKYRDEFRPRAGMIRGRQFVMKDAYSFDIDEEGLKKAYLQERGA 185 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIFHRL L + + A SGP+GG S EF+ GE + + + + T Sbjct: 186 YERIFHRLDLNYVIVHAVSGPMGGSESEEFLAPMPIGEDTFALAPSGKAWNVEALTTPES 245 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + + +SI P A D + DSL Sbjct: 246 EPLDFSSI------PAAQVKDTPDSTTIDSL 270 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 92/158 (58%), Gaps = 2/158 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS M +G+ V MG YGIG RV++ + E+ HD KG+I Sbjct: 432 RGVEIGQVFQLGLKYSHAMGLKVLNKNGQAVPVWMGCYGIGVSRVMSCIAETHHDDKGLI 491 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 WP ++AP ++ L+ D+ A + ++ +L G +V +DD + G +F ++LL Sbjct: 492 WPAAIAPAQVHLVATGKDDRAFHIADDLLH-QLEGEGIEVLYDDRLKVSPGVKFKDSELL 550 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G PL ++VG V++ VEI++R +G + + LE+ + Sbjct: 551 GMPLVLVVGRDAVNNGTVEIRNRRSGQVQIVPLEQAFH 588 >gi|305681315|ref|ZP_07404122.1| proline--tRNA ligase [Corynebacterium matruchotii ATCC 14266] gi|305659520|gb|EFM49020.1| proline--tRNA ligase [Corynebacterium matruchotii ATCC 14266] Length = 666 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 100/249 (40%), Positives = 143/249 (57%), Gaps = 19/249 (7%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+Y+WLPLG + L + ++REE Sbjct: 86 RLSSLFLRTLREDPADAEVPSHKLLVRAGYIRRAAPGVYTWLPLGLRTLRKIEKVVREEM 145 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L S + + ++ R+ YG + RL DR M+ GPTHEE+ + Sbjct: 146 DNIGAQELLFPALLSREPYEQTRRWTEYGDNLFRLKDRKGNDMLLGPTHEEMFARQVKDM 205 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T G + SY +Y Sbjct: 206 FTSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMTDAGLEQSYLAHRAAY 265 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-------------------TQVF 222 IF RL L+ +A SG +GG S EF+ ++ GE TQ Sbjct: 266 QAIFDRLNLEYAICKATSGAMGGSASEEFLAISPNGEDTFVRATEGDYAANVEAVTTQPG 325 Query: 223 CSKDFMDFP 231 ++DF + P Sbjct: 326 TTRDFTNLP 334 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 5/156 (3%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ + V RGIE+GHIF G KY+ GK MGSYGIG R+V Sbjct: 491 DPAPDGQGVLTLERGIEIGHIFQLGRKYTEVFDVQILDEHGKRTIPTMGSYGIGISRLVG 550 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + E HD G+ WP VAP+++ ++ + D+ A + I A+L G +V +DD + Sbjct: 551 VIAEQHHDDNGLNWPVEVAPYQVHVV-VANKDKAALAAGDDIVAQLDATGVEVLFDDRPK 609 Query: 387 -QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +F ++LLG P V++G F S+ VE++ R Sbjct: 610 VSPGVKFKDSELLGMPYIVVLGRSF-SNGIVELRIR 644 >gi|38234063|ref|NP_939830.1| prolyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129] gi|81829888|sp|Q6NGM7|SYP_CORDI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|38200325|emb|CAE50010.1| prolyl-tRNA synthetase [Corynebacterium diphtheriae] Length = 585 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 136/217 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+Y+WLPLG + L V ++REE Sbjct: 4 RLSTLFLRTLREDPADAEVPSHKLLVRAGYIRRTAPGVYTWLPLGLRTLRKVETVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + ++ R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DAIGAQELLFPALLPREPYEQTHRWTEYGDSLFRLKDRKGGDYLLGPTHEEMFASAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD++ G + SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMSDAGLEDSYQRHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RI RLG++ + A SG +GG S EF+ ++D GE Sbjct: 184 QRILDRLGVEYVICAATSGAMGGSASEEFLAVSDNGE 220 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 5/156 (3%) Query: 269 DSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D PE + ARGIEVGHIF G KY+ GK MGSYGIG R++A Sbjct: 410 DPAPEGQGTLTLARGIEVGHIFQLGRKYTEAFDVQILDESGKRAIPTMGSYGIGVSRLMA 469 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + E HD G+ WP VAP+++ ++ + D+ +A + + A L G +V +DD + Sbjct: 470 VLAEQRHDETGLNWPLEVAPYQVHVV-VANKDKEAIEAGDALVAALDSHGIEVLFDDRPK 528 Query: 387 -QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +F A+LLG P V++G F D +E++ R Sbjct: 529 VSPGVKFKDAELLGMPFVVVLGRAF-KDGNIELRER 563 >gi|309809554|ref|ZP_07703412.1| proline--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|308170226|gb|EFO72261.1| proline--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] Length = 483 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 103/218 (47%), Positives = 130/218 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L N II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRNAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF R G++ P+ A SG +GG S EF A GE Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGE 218 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/73 (47%), Positives = 47/73 (64%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M+A F +GK + MGSYGIG R+++A++E GI WP Sbjct: 407 IEVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFWP 466 Query: 342 DSVAPFKISLINI 354 VAPF+I +I + Sbjct: 467 KEVAPFEIHIIQM 479 >gi|229820980|ref|YP_002882506.1| prolyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] gi|229566893|gb|ACQ80744.1| prolyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] Length = 586 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 140/215 (65%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ FL L+E+P DAE+ SH+L++R G I + + GIY+WLPLG + L V AI+REE + Sbjct: 2 SRLFLRTLREDPVDAEVDSHRLLVRAGYIRRAAPGIYTWLPLGLRVLARVEAIVREEMDA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L + + SGR+ +YG+ + RL DR + + PTHEE+ T + + Sbjct: 62 AGAQEVHFPALLPREPYEASGRWTTYGQGIFRLKDRREGDYLLAPTHEEMFTLLVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFD+ + SY+ +Y R Sbjct: 122 SYKDLPLTLYQIQTKYRDEARPRAGLLRGREFIMKDAYSFDVDLARFERSYDAQRHAYQR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RLGL+ + ++A SG +GG S EF+ GE Sbjct: 182 IFDRLGLEYVIVKASSGLMGGTRSEEFLSPCAIGE 216 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 92/163 (56%), Gaps = 6/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF GT +S + T +GK MGSYG+G R VAA+ E+ HD +G+ Sbjct: 418 ARGIEIGHIFDLGTTFSDALGLTVLDENGKAIVPTMGSYGVGVSRAVAALAETHHDERGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP VAP ++ ++ D V A E A ++ DV DD + G +FA +L Sbjct: 478 TWPVHVAPAQVHIVATGKDDAVFAAAEELGAALTARR-IDVLLDDRRKVSAGVKFADGEL 536 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 LG P+ V+VG + ++D +E++ R + +RED+ EV A H Sbjct: 537 LGMPVIVVVG-RGLADGTIEVRLRASDLREDV---EVARAADH 575 >gi|223984654|ref|ZP_03634777.1| hypothetical protein HOLDEFILI_02073 [Holdemania filiformis DSM 12042] gi|223963395|gb|EEF67784.1| hypothetical protein HOLDEFILI_02073 [Holdemania filiformis DSM 12042] Length = 566 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 143/226 (63%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F L+EN +D + S L++R GMI + S G+Y +LPLG K L + I+REE Sbjct: 1 MRLSQSFFTTLRENVKDEDSVSGNLLVRAGMIKKSSAGVYMYLPLGYKVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G+ E+ +P L +++V SGR D++G M L DR +K+ + GPTHEE+ Sbjct: 61 MDQAGSQELLMPALIPEEVYVASGRRDNFGSSMFSLKDRFNKSYVLGPTHEELFAVAAGM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+++PF YQ Q K+RDE RPR+G++R REF+MKDAYSFD G +Y KMF + Sbjct: 121 KIRSYKDMPFNLYQFQTKYRDEARPRYGLIRVREFIMKDAYSFDKDEAGMDVAYQKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 Y R F R+ + +RA++G +GG LS EF + + GE V C + Sbjct: 181 YKRAFDRMHMDYKIVRADTGVMGGLLSEEFQAVTEIGEDVLVLCDQ 226 Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 5/188 (2%) Query: 250 EQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 E + A Y T+DV D+ P K V +GIE+G+ F GTKY+ M + + Sbjct: 371 EDFKADY--TADVRQIMEGDTCPICGGKIVFKKGIEIGNTFKLGTKYAQAMDLEYLDQEN 428 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 K + V MGSYGIG R +AA+ E D G+ WP ++AP+ ++++ I D+ A E+ Sbjct: 429 KLNPVWMGSYGIGIGRCMAALAEQHSDEHGLCWPINIAPYPVAIVVIAKKDEQQMAAAEQ 488 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA+L G DV DD E+ G +F DL+G P+++ VG K + D VE+K R E Sbjct: 489 LYAQLQAAGVDVMLDDRDERPGVKFKDMDLIGTPIRLTVGKK-IGDGLVEMKLRKAEKAE 547 Query: 428 DMSLEEVI 435 D+S++ V+ Sbjct: 548 DISIDNVV 555 >gi|224283879|ref|ZP_03647201.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] gi|310287860|ref|YP_003939118.1| prolyl-tRNA synthetase [Bifidobacterium bifidum S17] gi|309251796|gb|ADO53544.1| prolyl-tRNA synthetase [Bifidobacterium bifidum S17] Length = 599 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 138/215 (64%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+E+P DA+ S KL+LR G + + + GI++WLPLG K L+ + AI+REE + Sbjct: 2 STMFLRTLREDPADADTDSAKLLLRAGYVRKAAPGIWTWLPLGLKVLNKIEAIVREEIDG 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L + + + R++ YG+ + RL DR++ + PTHEE+ T + + Sbjct: 62 IGAQEVHFPALLPREPYEATHRWEEYGENLFRLKDRHEADYLLAPTHEEMFTLLVKDMYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG K +Y +Y R Sbjct: 122 SYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTIDEEGMKKAYYDERGAYER 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RL LK +P+ A SGP+GG S EF+ GE Sbjct: 182 IFQRLDLKYVPVFAMSGPMGGSASEEFLAPMAIGE 216 Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD +G+ Sbjct: 431 RGVEIGQVFQLGLKYSKALDLKVLDQNGKTVPVWMGCYGIGVSRVLACIAETHHDERGLA 490 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP ++ ++ D DA EK+ A L + G +V +DD + G +F A+L+ Sbjct: 491 WPAVIAPAQVHVVAT-GKDAAAFDAAEKLVAELEERGIEVIYDDRKKVSPGVKFKDAELI 549 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL + G V++ +EI++R Sbjct: 550 GVPLIAVAGRDTVNNGTIEIRNR 572 >gi|293401596|ref|ZP_06645738.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304854|gb|EFE46101.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 563 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 100/253 (39%), Positives = 150/253 (59%), Gaps = 10/253 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S F ++EN +D + S L++R GMI + S GIY +P+G++ L + I+REE Sbjct: 1 MKLSNSFFYTIRENAKDEDSVSGNLLVRAGMIKKSSSGIYMIMPMGKRVLQKIETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + TGA E+ +P L +++ +SGR +++G M L DR K + GPTHEE+ T Sbjct: 61 MDATGAQELLMPVLIPEEVYEKSGRREAFGANMFALKDRYQKRYVMGPTHEELFTIAATM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P+ YQIQ KFRDE RPR+G++R REF+MKDAYSFD+ E SY KMF + Sbjct: 121 KGSSYKDFPYNLYQIQTKFRDETRPRYGLIRVREFIMKDAYSFDVDEESMHVSYMKMFHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I RLGL ++A++G +GG LS EF + GE D + E+ +F Sbjct: 181 YKKIMERLGLTYKIVKADTGAMGGSLSEEFQAITPIGE----------DVVVGCEHCNFS 230 Query: 241 DIISLNSIVEQWT 253 + + +V+Q + Sbjct: 231 SNLEITEVVDQAS 243 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/155 (38%), Positives = 87/155 (56%), Gaps = 1/155 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIEVG+ F GTKY+ + ++ K H VQMG YG G R +AA++E +D GI Sbjct: 400 AKGIEVGNTFKLGTKYAESLGLEYQDETNKLHPVQMGCYGFGLGRAMAAIVEQHNDASGI 459 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAP++++++ + D+ +Y LS G DV DD E+ G +F +L+ Sbjct: 460 IWPASVAPYQVAIVVVAIKDEEQMRVATALYEELSAAGIDVVLDDRKERPGVKFKDMELI 519 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G P ++ VG V D KVE + R E+ + E Sbjct: 520 GIPYRITVGRGAV-DGKVEFRARTASENEEWLISE 553 >gi|296117670|ref|ZP_06836254.1| proline--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] gi|295969401|gb|EFG82642.1| proline--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] Length = 585 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 106/283 (37%), Positives = 159/283 (56%), Gaps = 21/283 (7%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P +AE+ SHKL++R G + + + GIYSWLPLG + L + ++REE Sbjct: 4 RLSELFLRTLREDPAEAEVPSHKLLVRAGYLRRAAPGIYSWLPLGLRTLRKIEDVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + + R+ YG + RL DR M+ GPTHEE+ + Sbjct: 64 NAIGGQELLFPALLPREPYELTDRWTEYGDNLFRLKDRKGADMLLGPTHEEMFAQTVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD++ EG SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFIMKDSYSFDMSDEGLDKSYARHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD--------FMDFPIP 233 +IF RLG++ +A SG +GG S EF+ +++ GE + D + P+P Sbjct: 184 QKIFDRLGIEYAICQATSGAMGGSASEEFLAVSEVGEDTFVRATDGDYAANVEAVVTPVP 243 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 +E D+ ++ P A D + + D+L E R Sbjct: 244 AE-IDYSNL------------PEAKEYDTPDSETIDTLVEWAR 273 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 8/169 (4%) Query: 256 YAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + S+VH D PE + RGIE+GHIF G KY+ +GK Sbjct: 399 FVEASEVHE---GDPAPEGQGTLTLKRGIELGHIFQLGRKYTQAFDVQILDENGKRAIPT 455 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MGSYGIG R++A + E HD KG+ WP VAP+++ + + D+ A ++ L Sbjct: 456 MGSYGIGVSRMMAVLAEQRHDEKGLNWPLDVAPYQVH-VAVANKDEDATKAGNELVEALD 514 Query: 374 KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 K G +V +DD + G +F A+LLG P I+G F D +E++ R Sbjct: 515 KAGVEVLFDDRPKVSPGVKFKDAELLGMPYCAILGRSF-KDGIIELRIR 562 >gi|323356826|ref|YP_004223222.1| prolyl-tRNA synthetase [Microbacterium testaceum StLB037] gi|323273197|dbj|BAJ73342.1| prolyl-tRNA synthetase [Microbacterium testaceum StLB037] Length = 600 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 97/217 (44%), Positives = 136/217 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S +FL L+E+P DAE+ASH+L++R G I +++ GI++WLPLG K + ++REE Sbjct: 6 RLSNFFLRTLREDPSDAEVASHRLLVRAGYIRRNAPGIFAWLPLGLKVKAKIETVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+ P L + + +GR++ YG + RL DR + PTHEE+ T + + Sbjct: 66 ANAGAFEVHFPALLPREPYEVTGRWEEYGDALFRLQDRKGADYLLAPTHEEMFTLLVKDL 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF MKDAYSFD T G SY +Y Sbjct: 126 YSSYKDLPLTIYQIQDKYRDEARPRAGLLRGREFTMKDAYSFDATDAGLNASYQAQRDAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RLGL+ + + A++G +GG S EF+ GE Sbjct: 186 ERIFTRLGLEYVIVAADAGAMGGSKSEEFLHPTPIGE 222 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 92/158 (58%), Gaps = 3/158 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARG+E+GH+F G KY+ + +GK V MGSYGIG R++A + E ++D KG+ Sbjct: 440 ARGMEIGHVFQLGRKYAEALGLKVLDENGKLATVTMGSYGIGVTRILAIIAELNNDEKGL 499 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 IWP SVAPF + ++ D + E++ A L G DV +DD + G +F A+L Sbjct: 500 IWPASVAPFDVHVVA-TGRDAAAFELAEQVSADLEAAGLDVLYDDRPKVSPGVKFGDAEL 558 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G P +IVG + ++ +VE+ R TG RE + + + + Sbjct: 559 VGIPRILIVG-RGAAEGQVELWDRRTGERETLPVADAL 595 >gi|320096236|ref|ZP_08027820.1| proline--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] gi|319976817|gb|EFW08576.1| proline--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] Length = 594 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 138/215 (64%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+E+P DAE+ SHKL++R G I + + GIY+WLPLG + L + I+REE +R Sbjct: 6 STLFLRTLREDPADAEVNSHKLLVRAGYIRRAAPGIYTWLPLGLRTLRKIEGIVREEMDR 65 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L A+ + + R++ YG + +LADR + PTHEE+ T + + Sbjct: 66 MGAQEVHFPGLIPAEPYKATNRWEDYGPTLFKLADRKGGDYLLAPTHEEMFTLLVKDMYS 125 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFD+ G + SY +Y R Sbjct: 126 SYKDLPTTLYQIQTKYRDEARPRAGLIRGREFVMKDAYSFDIDEAGLEASYQAERDTYER 185 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RLGL+ + + A SG +GG S EF+ + GE Sbjct: 186 IFTRLGLEYVIVSAMSGAMGGSRSEEFLHPSPIGE 220 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/81 (43%), Positives = 51/81 (62%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G+KY+ + + +GK V MGSYGIG RV+AA+ E++ D KG+ Sbjct: 426 RGIEIGHIFQLGSKYAEALGLSVLDENGKSRVVTMGSYGIGVTRVMAALAEANCDDKGLS 485 Query: 340 WPDSVAPFKISLINIKAHDQV 360 WP +APF + ++ + V Sbjct: 486 WPAGIAPFDVHVLATGKDNAV 506 >gi|134102383|ref|YP_001108044.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133915006|emb|CAM05119.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 574 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 96/212 (45%), Positives = 134/212 (63%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 FL L+E+P DAE+ SH+L++R G + + GIYSWLPLG + L N+ I+R+E + GA Sbjct: 2 FLRTLREDPADAEVPSHRLLVRAGYVRRIGPGIYSWLPLGLRVLRNIEEIVRQEMDAIGA 61 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P L + + + R+ YG + RL DR + GPTHEE+ T + SY+ Sbjct: 62 QEIHFPALLPKEPYEATNRWTEYGPNLFRLKDRKGGDYLLGPTHEELFTLTVKGEYSSYK 121 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 + P YQIQ K+RDE RPR G++R REF+MKD+YSFDL EG +SY +Y+RIF Sbjct: 122 DYPVILYQIQTKYRDEERPRAGILRGREFVMKDSYSFDLDDEGLTNSYRLHRDAYIRIFD 181 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 R+GL+ + + A SG +GG S EF+ A TGE Sbjct: 182 RVGLRYVIVAATSGAMGGSASEEFLAEAPTGE 213 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 97/165 (58%), Gaps = 2/165 (1%) Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 E V+ARGIE+GHIF G KY+ S G DGK + MGSYG+G R+VAA+ E S Sbjct: 405 EGTLVAARGIEIGHIFQLGRKYADAFSLDALGQDGKPKRITMGSYGVGVSRMVAAIAEQS 464 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 HD G++WP VAP + ++ I D+ R+ E++ A L G V DD G +F Sbjct: 465 HDELGLVWPREVAPADVHVV-IAGKDESVREGAERLAADLDAAGVRVLLDDRNASPGVKF 523 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 A A+L+G P ++VG K ++ VE+K R +G RE++ ++ + + Sbjct: 524 ADAELVGVPTILVVG-KGLAKGVVEVKDRRSGDREEVPVDGAVEH 567 >gi|169630222|ref|YP_001703871.1| prolyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977] gi|226701313|sp|B1MD96|SYP_MYCA9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169242189|emb|CAM63217.1| Prolyl-tRNA synthetase ProS [Mycobacterium abscessus] Length = 580 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 97/223 (43%), Positives = 138/223 (61%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+++P DAE+ SHKL++R G + + G+YSWLPLG + L + I+REE Sbjct: 4 RLSELFVRTLRDDPADAEVPSHKLLIRAGYVRPVAPGVYSWLPLGLRVLRKIENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ +P L + + R+ YG + RL DR D M+ GPTHEE+ + Sbjct: 64 NAIGGQEILLPALLPRAPYETTNRWTEYGDSLFRLKDRRDNDMMLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQ+Q K+RDE RPR G++R REF+MKD+YSFD + +G K +Y+ +Y Sbjct: 124 YSSYKDFPVILYQVQTKYRDEARPRAGILRGREFVMKDSYSFDTSDDGLKAAYHAHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF RLGL + + A SG +GG S EF+ + TGE T V C Sbjct: 184 QRIFGRLGLDYVIVAATSGAMGGSASEEFLAESPTGEDTFVRC 226 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 2/159 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 VSARGIE+GHIF G KY+ + G +GK + GSYGIG R+VA V E HD Sbjct: 416 VSARGIEIGHIFQLGRKYTDAFTVDVLGENGKPVRLTQGSYGIGVSRLVAVVAEQQHDEL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP +V+PF + ++ I D R E++ A L ++G +V DD G +F A+ Sbjct: 476 GLRWPSAVSPFDVHVV-IANKDDAARAGAEELAAELDRLGHEVLLDDRTASPGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LLG P V++G + +D +E+++R TG + +++ + + Sbjct: 535 LLGVPWIVVIGRGW-ADGTIELRNRFTGETQPIAVTDAV 572 >gi|325972766|ref|YP_004248957.1| prolyl-tRNA synthetase [Spirochaeta sp. Buddy] gi|324028004|gb|ADY14763.1| Prolyl-tRNA synthetase [Spirochaeta sp. Buddy] Length = 588 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 137/224 (61%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F L+E P A+ ++ +LR G I Q GI+S LP G A + IIR+E Sbjct: 1 MRMSRLFSKTLREAPNGADSKGYEYLLRAGFIRQLGAGIFSLLPFGFNATKKIEQIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E+ +P + AD+W E+GRY S KEM R +DR + M+ THEE +TD+ R Sbjct: 61 MNAIGGQEILMPLVNPADIWKETGRYYSIDKEMSRFSDRVGRDMVLAMTHEEAVTDLARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RD+ RPR G++R REF MKD+YSFD+ EG Y + + Sbjct: 121 EIDSYKRLPLLVYQIQTKWRDDPRPRAGLIRVREFTMKDSYSFDVDQEGLDAQYAAHYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y RIF R GL I + A+SG +GG +SHE++ L+ GE T + C Sbjct: 181 YFRIFSRCGLPVIVVGADSGMMGGKISHEYMYLSSIGEDTIITC 224 Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 104/176 (59%), Gaps = 7/176 (3%) Query: 259 TSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ + S PE + S++G+EVG+IF T+YS M+ +++ G V MGS Sbjct: 387 VADIASAAAGYSCPECSKPLSSSKGVEVGNIFQLNTRYSESMNCSYQDEGGLRKPVIMGS 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R++A + E+ D +G+ P SVAP ++ L+++ ++ E+IY +LS G Sbjct: 447 YGIGVGRLLACLAENYSDEQGLSLPISVAPMQVHLVSLVKDAEI----GEQIYNKLSDAG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +V +DD E G +FA ADL+G P+++ +G++ + + KVE+K R + E S E Sbjct: 503 IEVLYDDRKESAGVKFADADLIGLPIRITLGNRSLKEGKVEVKLR-RNLEESFSFE 557 >gi|293189858|ref|ZP_06608572.1| proline--tRNA ligase [Actinomyces odontolyticus F0309] gi|292821273|gb|EFF80218.1| proline--tRNA ligase [Actinomyces odontolyticus F0309] Length = 602 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 138/221 (62%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S +FL L+E+P DAE+ SHKL++R G I + + GIY+WLPLG + L + I+REE + Sbjct: 6 STFFLRTLREDPADAEVNSHKLLVRAGYIRRSAPGIYTWLPLGLRTLRKIEDIVREEMDA 65 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L A+ + + R++ YG + +L DR + PTHEE+ T + + Sbjct: 66 MGAQEVHFPGLIPAEPYKATNRWEEYGPTLFKLNDRKGGDYLLAPTHEEMFTLLVKDMYS 125 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFD+ EG SY +Y R Sbjct: 126 SYKDLPATLYQIQTKYRDEARPRAGLIRGREFVMKDAYSFDIDDEGLNASYQAERDTYER 185 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 IF RLGL+ + + A SG +GG S EF+ + GE S Sbjct: 186 IFQRLGLRYVIVSAMSGAMGGSRSEEFLHPSPIGEDTFVAS 226 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 91/157 (57%), Gaps = 3/157 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ + T +GK V MGSYGIG RV+AA+ E++ D KG+ Sbjct: 434 RGIEIGHIFQLGRKYAKALGLTVLDENGKTQVVTMGSYGIGVTRVMAALAEANCDDKGLS 493 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +APF + ++ D+V A + + L G DV DD + G +F +L+ Sbjct: 494 WPAQIAPFDVHVLATGKGDEVFETA-QSLGEELDAAGLDVLVDDRRKVSAGVKFKDYELV 552 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++VG + ++DS+VEI+ R TG + +EE + Sbjct: 553 GVPFGLVVG-RSLADSEVEIRVRATGETIVLPVEEAV 588 >gi|154509145|ref|ZP_02044787.1| hypothetical protein ACTODO_01666 [Actinomyces odontolyticus ATCC 17982] gi|153798779|gb|EDN81199.1| hypothetical protein ACTODO_01666 [Actinomyces odontolyticus ATCC 17982] Length = 602 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 138/221 (62%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S +FL L+E+P DAE+ SHKL++R G I + + GIY+WLPLG + L + I+REE + Sbjct: 6 STFFLRTLREDPADAEVNSHKLLVRAGYIRRSAPGIYTWLPLGLRTLRKIEDIVREEMDA 65 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L A+ + + R++ YG + +L DR + PTHEE+ T + + Sbjct: 66 MGAQEVHFPGLIPAEPYKATNRWEEYGPTLFKLNDRKGGDYLLAPTHEEMFTLLVKDMYS 125 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFD+ EG SY +Y R Sbjct: 126 SYKDLPATLYQIQTKYRDEARPRAGLIRGREFVMKDAYSFDIDDEGLNASYQAERDTYER 185 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 IF RLGL+ + + A SG +GG S EF+ + GE S Sbjct: 186 IFQRLGLRYVIVSAMSGAMGGSRSEEFLHPSPIGEDTFVAS 226 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 89/157 (56%), Gaps = 3/157 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ + T +GK V MGSYGIG RV+AA+ E++ D KG+ Sbjct: 434 RGIEIGHIFQLGRKYAKALGLTVLDENGKTQVVTMGSYGIGVTRVMAALAEANCDDKGLS 493 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +APF + ++ D+V A + + L G DV DD + G +F +L+ Sbjct: 494 WPAQIAPFDVHVLATGKGDEVFETA-QSLGEELDAAGLDVLVDDRRKVSAGVKFKDYELV 552 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++VG + ++D VEI+ R TG + +EE + Sbjct: 553 GVPFGLVVG-RSLADGDVEIRVRGTGETIVVPVEEAV 588 >gi|227497547|ref|ZP_03927775.1| proline--tRNA ligase [Actinomyces urogenitalis DSM 15434] gi|226833001|gb|EEH65384.1| proline--tRNA ligase [Actinomyces urogenitalis DSM 15434] Length = 614 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 97/215 (45%), Positives = 136/215 (63%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S F+ L+E+P DAE+ASHKL++R I + + GIY+WLPLG + + AI+REE NR Sbjct: 6 STAFIRTLREDPADAEVASHKLLVRASYIRRTAPGIYTWLPLGLAVVRKIEAIVREEMNR 65 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L A+ + + R+D YG + L DR + PTHEE+ T + + Sbjct: 66 MGGQEVHFPALLPAEPYKATQRWDEYGPTLFTLQDRKGGDYLLAPTHEEMFTLLAKDMFS 125 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY + +Y R Sbjct: 126 SYKDLPATLYQIQTKYRDEARPRAGLIRGREFIMKDSYSFDVDDAGLDASYQRHRDAYER 185 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RLGL+ +P+ A +G +GG S EF+ + GE Sbjct: 186 IFRRLGLEYVPVNAMAGAMGGSHSEEFLHPSPIGE 220 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 60/148 (40%), Positives = 85/148 (57%), Gaps = 2/148 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KY+ + T +GK V MGSYGIG RV+AA+ E++HD +G+ Sbjct: 439 RGIEVGHIFALGRKYAQALGFTVLDENGKARVVTMGSYGIGVSRVMAALAEANHDERGLA 498 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP VAP+ + ++ +QV A + L G +V +DD + G +FA ++LL Sbjct: 499 WPIQVAPYHVQVLATGKDEQVFATA-HALARELDAAGLEVLYDDRRKVSAGVKFADSELL 557 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 G P V+VG + VEI+ R +G R Sbjct: 558 GVPFTVVVGRDLAKEGTVEIRDRRSGER 585 >gi|294786669|ref|ZP_06751923.1| proline--tRNA ligase [Parascardovia denticolens F0305] gi|294485502|gb|EFG33136.1| proline--tRNA ligase [Parascardovia denticolens F0305] Length = 601 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 107/271 (39%), Positives = 152/271 (56%), Gaps = 6/271 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+++P DA++ S KL++R G I + G+YSWLPLG K L+ + AIIREE Sbjct: 10 LRMSTLFLRTLRDDPADADVDSAKLLIRAGYIRKIGPGLYSWLPLGLKVLNKIEAIIREE 69 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P + + + S R++ YG + R DR+ + PTHEE+ T + + Sbjct: 70 INALGAQEVHFPAMMPREPYQMSNRWEEYGDNIFRFKDRHGADYLLAPTHEEMFTLMVKD 129 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R R+F+MKDAYSFD+ EG K SY + Sbjct: 130 MYTSYKDLPVTLYQIQGKYRDEFRPRAGMIRGRQFVMKDAYSFDIDEEGLKKSYLAERAA 189 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIFHRL + + + A SGP+GG S EF+ GE + + + + T Sbjct: 190 YERIFHRLAVDYVIVHAVSGPMGGSESEEFLAPLPIGEDTFALAPSGKAWNVEALTTPAM 249 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D + + P A D + DSL Sbjct: 250 DPVDYSQ------TPAATVVDTPDSPTIDSL 274 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 62/155 (40%), Positives = 90/155 (58%), Gaps = 2/155 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS M +GK V MG YGIG RV++ + E+ HD KG+I Sbjct: 436 RGVEIGQVFQLGLKYSKAMGLNVLNQNGKAVPVWMGCYGIGVSRVMSCIAEAHHDDKGLI 495 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP SVAP ++ LI DQ D E + L K +V +DD + G +F ++LL Sbjct: 496 WPLSVAPAQVHLIAT-GKDQKAYDLAESLLGDLEKADVEVLYDDRAKMSPGVKFKDSELL 554 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G P+ V+VG +SD VEI++R TG ++ + L++ Sbjct: 555 GLPMIVVVGRDTLSDGTVEIRNRATGEKDVVPLDQ 589 >gi|302206413|gb|ADL10755.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231] gi|302330969|gb|ADL21163.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002] gi|308276656|gb|ADO26555.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19] Length = 585 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 135/217 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+Y+WLPLG + L + I+REE Sbjct: 4 RLSALFLRTLREDPADAEVPSHKLLVRAGYIRRAAPGVYTWLPLGLRTLKKIENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DGIGAQELLFPALLPREPYQATNRWTEYGDSLFRLKDRKGADYLLGPTHEEMFAGAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T +G + SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMTDDGLESSYQRHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RI RLG++ A SG +GG S EF+ +++ GE Sbjct: 184 QRILDRLGVEYAICSATSGAMGGSASEEFLAISENGE 220 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 59/156 (37%), Positives = 84/156 (53%), Gaps = 5/156 (3%) Query: 269 DSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D PE + ARGIEVGHIF G KY+ +GK MGSYGIG R++A Sbjct: 410 DPAPEGQGTLTLARGIEVGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGIGVSRLMA 469 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + E HD KG+ WP VAPF + ++ + D +A + + + L G +V +DD + Sbjct: 470 VLAEQRHDEKGLNWPIEVAPFAVHVV-VANKDTAAIEAGDALVSELDAAGVEVLFDDRPK 528 Query: 387 -QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +F A+LLG P V++G F + KVE++ R Sbjct: 529 VSPGVKFKDAELLGMPYVVVLGRSF-KEGKVELRVR 563 >gi|283769476|ref|ZP_06342372.1| proline--tRNA ligase [Bulleidia extructa W1219] gi|283103744|gb|EFC05130.1| proline--tRNA ligase [Bulleidia extructa W1219] Length = 561 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 96/226 (42%), Positives = 142/226 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + L+EN +D + S L++R GMI + S G+Y LP+G K + + +II+EE Sbjct: 1 MRLKNSYFFTLRENAKDEDSQSSNLLVRAGMIKKSSTGVYMILPMGLKVFNKIKSIIQEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ +P+L +++V SGR + +G +M L DR ++ + GPTHEE+ + Sbjct: 61 MEAIHCQELLMPSLIPEEVYVASGRREGFGSDMFSLKDRKNQNYVLGPTHEELFATAAKL 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+++PF+ YQIQ KFRDE RPR+G++R REF MKDAYSFD G SYNK F + Sbjct: 121 KIRSYKDMPFSIYQIQTKFRDEPRPRYGLIRVREFQMKDAYSFDANEAGMDSSYNKQFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y IF RLGL + ++A++G +GG LS EF L+ GE + ++D Sbjct: 181 YKNIFDRLGLNYVVVKADTGVMGGLLSEEFQALSPVGEDTLALNED 226 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/162 (39%), Positives = 96/162 (59%), Gaps = 2/162 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVG+ F GTKYS M + A+ + YV MG YGIG R +AA++E ++D GI Sbjct: 401 KGIEVGNTFKLGTKYSKAMDLQYSNANNQLEYVWMGCYGIGPARAMAALVEQNYDENGIN 460 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++AP++ S+ I D +Y +L K G DV DD E+ G +F DL+G Sbjct: 461 WPKNLAPYRCSITIISMKDDQQIQVANDLYDQLRKAGIDVLLDDRDERPGVKFKDMDLIG 520 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 P Q+ VG K V D +VEIK R +++ +S++ V++Y + + Sbjct: 521 IPTQITVG-KNVVDGQVEIKER-GHMKQSISIDSVLDYLTQK 560 >gi|313141032|ref|ZP_07803225.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] gi|313133542|gb|EFR51159.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] Length = 596 Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 97/212 (45%), Positives = 137/212 (64%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 FL L+E+P DA+ S KL+LR G + + + GI++WLPLG K L+ + AI+REE + GA Sbjct: 2 FLRTLREDPADADTDSAKLLLRAGYVRKAAPGIWTWLPLGLKVLNKIEAIVREEIDGIGA 61 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P L + + + R++ YG+ + RL DR++ + PTHEE+ T + + SY+ Sbjct: 62 QEVHFPALLPREPYEATHRWEEYGENLFRLKDRHEADYLLAPTHEEMFTLLVKDMYSSYK 121 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 +LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG K +Y +Y RIF Sbjct: 122 DLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTIDEEGMKKAYYDERGAYERIFQ 181 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RL LK +P+ A SGP+GG S EF+ GE Sbjct: 182 RLDLKYVPVFAMSGPMGGSASEEFLAPMAIGE 213 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD +G+ Sbjct: 428 RGVEIGQVFQLGLKYSKALDLKVLDQNGKTVPVWMGCYGIGVSRVLACIAETHHDERGLA 487 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP ++ ++ D DA EK+ A L + G +V +DD + G +F A+L+ Sbjct: 488 WPAVIAPAQVHVVAT-GKDAAAFDAAEKLVAELEERGIEVIYDDRKKVSPGVKFKDAELI 546 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL + G V++ +EI++R Sbjct: 547 GVPLIAVAGRDTVNNGTIEIRNR 569 >gi|117928726|ref|YP_873277.1| prolyl-tRNA synthetase [Acidothermus cellulolyticus 11B] gi|152074742|sp|A0LV31|SYP_ACIC1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|117649189|gb|ABK53291.1| prolyl-tRNA synthetase [Acidothermus cellulolyticus 11B] Length = 583 Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 137/223 (61%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+ L+E+P DAE+ SH+L++R G I + + GIYSWLPLG L + I+R+E Sbjct: 4 RMSKLFVRTLREDPADAEVPSHRLLVRAGYIRRVAPGIYSWLPLGYAVLRKIEEIVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P L +++ SGR++ YG + RL DR + GPTHEE+ T + + Sbjct: 64 LHIGGQEVHFPALIPREIYEASGRWNEYGDTLFRLKDRKGADYLLGPTHEELFTLLVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P +QIQ K+RDE RPR G++R REF+MKD+YSFDL G SY +Y Sbjct: 124 YSSYKDYPVILFQIQTKYRDEARPRAGILRGREFVMKDSYSFDLDDAGLAASYTAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFC 223 RIF RLGL+ + A SG +GG S EF+ + + GE V+C Sbjct: 184 RRIFDRLGLRYRIVSAVSGAMGGSASEEFLAVTEVGEDAFVYC 226 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 87/158 (55%), Gaps = 4/158 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+GIE+GHIF G KY+ G DG+ + MGSYGIG R VAA+ E HD G+ Sbjct: 419 AQGIEIGHIFQLGRKYTDAFELDALGPDGRPIRITMGSYGIGVSRAVAAIAEQCHDDAGL 478 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADL 397 IWP SV+P + ++ +Q E+ A L G DV DD + G +FA A+L Sbjct: 479 IWPRSVSPADVHVVIAGKGEQ--EKLAEEFAAALDTAGLDVLLDDRVDASAGVKFADAEL 536 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G P +VG + + VE++ R +G R +++L + + Sbjct: 537 IGIPSIAVVG-RGAARGVVEVRDRGSGERRELALTDAV 573 >gi|311739686|ref|ZP_07713521.1| proline--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305502|gb|EFQ81570.1| proline--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] Length = 589 Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 93/217 (42%), Positives = 136/217 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G + + + G+Y+WLPLG + L + ++R+E Sbjct: 4 RLSELFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGVYTWLPLGLRTLRKIEDVVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM P L + + ++ R+ YG + RL DR + M+ GPTHEE+ + Sbjct: 64 DAIGGQEMLFPALLPREPYEKTNRWVEYGDNLFRLKDRKNADMLLGPTHEEMFASAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF MKD+YSFD+T EG SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFTMKDSYSFDMTDEGLDESYGRHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RL + +A SG +GG S EF+ +++ GE Sbjct: 184 QNIFNRLEIDYAICKATSGAMGGSASEEFLAVSEVGE 220 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 5/156 (3%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D PEN RGIE+GHIF G KY+ +GK MGSYGIG R++A Sbjct: 414 DLAPENHGTLTLERGIELGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSYGIGITRMLA 473 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + E HD KG+ WP +VAP+++ + + D +A +K+ LS G +V +DD + Sbjct: 474 VLAEQRHDDKGLNWPVAVAPYQVH-VAVANKDAAAMEAGDKLVEELSAKGLEVLFDDRPK 532 Query: 387 -QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +F A+LLG P I+G F + K+E++ R Sbjct: 533 VSPGVKFKDAELLGMPFVAILGRAF-KEGKIELRIR 567 >gi|172040525|ref|YP_001800239.1| prolyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109] gi|226699134|sp|B1VGB6|SYP_CORU7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|171851829|emb|CAQ04805.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 592 Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 137/217 (63%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ASHKL++R G I + + G+YSWLP+G + L V ++R E Sbjct: 4 RMSSLFLHTLRDDPADAELASHKLLVRAGYIRRVAPGVYSWLPMGLRVLRKVENVVRREM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L + + + R+D YG E+ RL DR + + GPTHEE+ T + + Sbjct: 64 DAIGGQELMFPALLPKEPYEVTRRWDEYGPELFRLKDRKEADYLLGPTHEELFTWLVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSF++T EG SY +Y Sbjct: 124 LNSYKDFPKVLYQIQTKYRDEARPRAGILRGREFVMKDSYSFNMTDEGLDESYRLHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF LG++ + A SG +GG S EF+ +A GE Sbjct: 184 QRIFDALGIEYVICYATSGAMGGSASEEFLAVAADGE 220 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 5/171 (2%) Query: 269 DSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ K V +RGIE+GHIF G KY+ +G+ MGSYGIG R++A Sbjct: 416 DPSPDGKGVLTLSRGIEIGHIFQLGRKYTEAFDVQILDENGRRTVPTMGSYGIGVSRLLA 475 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 V E HD KG+ WP S+AP+ + ++ I D+ +A ++ LS G +V +DD + Sbjct: 476 VVAEQMHDEKGLRWPRSIAPYDVHVV-IANKDEAAGEAARELAEALSDAGLEVLFDDRPK 534 Query: 387 -QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G +F ++LLG P V+VG F ++ KVE++ RL R ++ + ++ Sbjct: 535 VSPGVKFKDSELLGMPQVVVVGRGF-AEGKVELRDRLNDERSEIDYADAVD 584 >gi|220919170|ref|YP_002494474.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|254782880|sp|B8J9M0|SYP_ANAD2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219957024|gb|ACL67408.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 574 Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 105/221 (47%), Positives = 140/221 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S+ F+P L+E P DA++ASHKL++R G I Q GIY +LPL +++L V AI+REE Sbjct: 4 VRYSQAFIPTLKEAPADAQVASHKLLVRAGFIRQLGAGIYDYLPLAKRSLAKVEAIVREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E +P L A++W ESGR+D G M RL DR G THEE+ T + R Sbjct: 64 MDAIGGQEFYLPALHPAEIWKESGRWDVMGDNMFRLKDRKGGDYCLGMTHEEIFTAVARD 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP +YQIQ KFRDE RP+ G++R R+F MKDAYSFD+ G SY + Sbjct: 124 ELRSYRQLPQVWYQIQTKFRDEPRPKSGLLRVRQFTMKDAYSFDVDRAGLDRSYEDQRRA 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y +IF R GL + ++A SG +GG S EF+V D GE V Sbjct: 184 YEKIFTRCGLDFVAVQAHSGSMGGSESSEFMVRTDAGEDLV 224 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 67/161 (41%), Positives = 98/161 (60%), Gaps = 1/161 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +E+GHIF GTKYS M AT A+GK + MGSYGIG R++AA IE HD GI+ Sbjct: 409 KALEIGHIFKLGTKYSESMKATVLDAEGKQVPIVMGSYGIGVERILAAAIELHHDDNGIV 468 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P ++APF +++ + ++ R A E++ A L K G +V +DD E+ G +F ADLLG Sbjct: 469 FPMAIAPFHATVLTLGPEPEL-RKAAEEVVAALGKEGVEVLFDDRDERAGVKFKDADLLG 527 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 P+++ VG K ++ VE K R G E + + EV A+ Sbjct: 528 IPIRIAVGKKGLAAGNVEWKLRKGGAVELVPVGEVARKAAE 568 >gi|255325212|ref|ZP_05366318.1| proline--tRNA ligase [Corynebacterium tuberculostearicum SK141] gi|255297777|gb|EET77088.1| proline--tRNA ligase [Corynebacterium tuberculostearicum SK141] Length = 589 Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 93/217 (42%), Positives = 136/217 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G + + + G+Y+WLPLG + L + ++R+E Sbjct: 4 RLSELFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGVYTWLPLGLRTLRKIEDVVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM P L + + ++ R+ YG + RL DR + M+ GPTHEE+ + Sbjct: 64 DAIGGQEMLFPALLPREPYEKTNRWVEYGDNLFRLKDRKNADMLLGPTHEEMFASAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF MKD+YSFD+T EG SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFTMKDSYSFDMTDEGLDESYGRHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RL + +A SG +GG S EF+ +++ GE Sbjct: 184 QNIFNRLEIDYAICKATSGAMGGSASEEFLAVSEVGE 220 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 5/156 (3%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D PEN RGIE+GHIF G KY+ +GK MGSYGIG R++A Sbjct: 414 DLAPENHGTLTLERGIELGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSYGIGITRMLA 473 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + E HD KG+ WP +VAP+++ + + D +A +K+ LS G +V +DD + Sbjct: 474 VLAEQRHDDKGLNWPVAVAPYQVH-VAVANKDAAAMEAGDKLVEELSAKGLEVLFDDRPK 532 Query: 387 -QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +F A+LLG P I+G F + K+E++ R Sbjct: 533 VSPGVKFKDAELLGMPFVAILGRAF-KEGKIELRIR 567 >gi|227504819|ref|ZP_03934868.1| prolyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] gi|227198669|gb|EEI78717.1| prolyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] Length = 591 Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 133/217 (61%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G + + + G+Y+WLPLG + L + I+REE Sbjct: 4 RLSNLFLRTLREDPADAEVLSHKLLVRAGYVRRAAPGVYTWLPLGLRTLTKIENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G EM P L + + + R+ YG + RL DR M+ GPTHEE+ + Sbjct: 64 NAIGGQEMLFPALLPREPYELTDRWTEYGDNLFRLKDRKGADMLLGPTHEEMFAGAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T EG SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMTDEGLDESYMRHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF+RL + +A SG +GG S EF+ ++ GE Sbjct: 184 QNIFNRLEIDYAICKATSGAMGGSASEEFLAVSPAGE 220 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 3/143 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ +GK MGSYGIG R++A + E D KG+ Sbjct: 429 RGIELGHIFQLGRKYTKAFDVQILDENGKRAVPTMGSYGIGVSRMMAVLAEQQADEKGLR 488 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP VAPF++ + + D +A +K+ L G +V +DD + G +F A+LL Sbjct: 489 WPVDVAPFQVH-VAVANKDAAALEAGQKLVEDLDAAGIEVLFDDRPKVSPGVKFKDAELL 547 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P I+G F +D +E++ R Sbjct: 548 GMPFIAILGRSF-ADGIIELRIR 569 >gi|312871363|ref|ZP_07731459.1| proline--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|312872484|ref|ZP_07732553.1| proline--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|312873339|ref|ZP_07733392.1| proline--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|311091129|gb|EFQ49520.1| proline--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|311092066|gb|EFQ50441.1| proline--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|311093115|gb|EFQ51463.1| proline--tRNA ligase [Lactobacillus iners LEAF 3008A-a] Length = 566 Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 129/218 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF R G++ P+ A SG +GG S EF A GE Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPASIGE 218 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 94/164 (57%), Gaps = 8/164 (4%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M+A F +GK + MGSYGIG R+++A++E I WP Sbjct: 407 IEVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNSIFWP 466 Query: 342 DSVAPFKISLI--NIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 VAPF+I +I N+K +Q V E+I++ DV +DD E+ G +F ADL+ Sbjct: 467 KEVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSD----KYDVLYDDRNERPGVKFNDADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P+++IVG + VS+ VE+K +MSL+ + Y S Sbjct: 523 GAPIRIIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKEL 565 >gi|23466273|ref|NP_696876.1| prolyl-tRNA synthetase [Bifidobacterium longum NCC2705] gi|227546627|ref|ZP_03976676.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|81847214|sp|Q8G3N0|SYP_BIFLO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|23327022|gb|AAN25512.1| prolyl-tRNA synthetase [Bifidobacterium longum NCC2705] gi|227212944|gb|EEI80823.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|291516313|emb|CBK69929.1| prolyl-tRNA synthetase, family II [Bifidobacterium longum subsp. longum F8] Length = 597 Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 137/215 (63%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE N Sbjct: 2 STMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREEING 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 62 IGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDMYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y R Sbjct: 122 SYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAYER 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RL LK +P+ A SGP+GG S EF+ GE Sbjct: 182 IFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGE 216 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD G+ Sbjct: 431 RGVEIGQVFQLGLKYSKALDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLA 490 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP + ++ D V + EK+ A L G +V +DD + G +F A+L+ Sbjct: 491 WPSVIAPAAVHVVAT-GKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELI 549 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL +VG +V+D +E++ R Sbjct: 550 GVPLVAVVGRDYVNDGTIELRDR 572 >gi|281206251|gb|EFA80440.1| prolyl-tRNA synthetase [Polysphondylium pallidum PN500] Length = 880 Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 100/225 (44%), Positives = 146/225 (64%), Gaps = 2/225 (0%) Query: 3 RSKYFLPILQENPRDAE-IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 RSK F+P+ ++ P D + + S LM +TGMI + S G+Y LPL +AL+N+ II +E Sbjct: 342 RSKLFIPMQRDQPLDKDMLKSQLLMQKTGMIRRASLGMYMTLPLAHRALENLIKIIDQEM 401 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G ++S+P L S +LW ++GR++S G E++++ DR + PTHEE+ T + + Sbjct: 402 SNIGGQKLSMPKLLSKELWEKTGRWESSGDELIKVKDRKGEEYCLAPTHEEIFTSMLANE 461 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + NLP YQI K+RDE+RPRFG++R REFLMKD YSFD + ++ +YN + +Y Sbjct: 462 RIATNNLPMKLYQIGDKYRDEIRPRFGLLRGREFLMKDMYSFDKSVADAEETYNLVKTAY 521 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 RIF RLG+ + A+SG IGG SHEF ++ D GE T V CSK Sbjct: 522 HRIFSRLGVNYACVEADSGNIGGSTSHEFQIITDVGEDTIVSCSK 566 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 8/171 (4%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS+P+ A K ++G D ++MG YGIG R++AA++E+ D GI+ Sbjct: 711 RGIEVGHIFRLGTKYSVPLKANIKNSEGVDVPMEMGCYGIGVSRLMAALVEAHKDLDGIV 770 Query: 340 WPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSK----VGCDVFWDDMGEQIGSQFA 393 WP VAP+K+ ++ + + R A E +Y LSK + D + + Sbjct: 771 WPIQVAPYKLIILPYATELETENLRKATE-LYDYLSKEPSLTNQIILEDRLDITFARRIK 829 Query: 394 VADLLGFPLQVIVGSKFVSDSKV-EIKHRLTGIREDMSLEEVINYASHRFS 443 A ++G P + V D V E++ R TG + ++ E++ + + S Sbjct: 830 EATIIGVPYILFVTQSKTRDQDVYELEDRTTGEKSFFNMVELLYFFRFKLS 880 >gi|315604524|ref|ZP_07879587.1| proline--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313536|gb|EFU61590.1| proline--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] Length = 602 Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 138/221 (62%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S +FL L+E+P DAE+ SHKL++R G I + + GIY+WLPLG + L + I+REE + Sbjct: 6 STFFLRTLREDPADAEVNSHKLLVRAGYIRRTAPGIYTWLPLGLRTLRKIEDIVREEMDA 65 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L A+ + + R++ YG + +L DR + PTHEE+ T + + Sbjct: 66 MGAQEVHFPGLIPAEPYKATNRWEEYGPTLFKLEDRKGGDYLLAPTHEEMFTLLVKDMFS 125 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFD+T G SY +Y R Sbjct: 126 SYKDLPTTLYQIQTKYRDEARPRAGLIRGREFVMKDAYSFDVTEVGLDASYQAERDTYER 185 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 IF RLGL+ + + A SG +GG S EF+ + GE S Sbjct: 186 IFTRLGLRYVIVSAMSGAMGGSRSEEFLHPSPIGEDTFVAS 226 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 3/146 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G KY+ + T GK V MGSYGIG RV+AA+ E++ D +G+ Sbjct: 434 RGIEIGHIFQLGRKYAQALGLTVLDECGKTQVVTMGSYGIGVTRVMAALAEANCDERGLS 493 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +APF + ++ ++V A + L G DV DD + G +F +L+ Sbjct: 494 WPAQIAPFDVHVLATGKGEEVFATAA-SLGDELDVAGLDVLVDDRRKVSAGVKFKDFELV 552 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G P ++VG + ++D KVEI+ R TG Sbjct: 553 GIPFGLVVG-RSLADGKVEIRVRATG 577 >gi|309805512|ref|ZP_07699557.1| proline--tRNA ligase [Lactobacillus iners LactinV 09V1-c] gi|308165163|gb|EFO67401.1| proline--tRNA ligase [Lactobacillus iners LactinV 09V1-c] Length = 472 Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 129/218 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF R G++ P+ A SG +GG S EF A GE Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGE 218 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 37/66 (56%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M+A F +GK + MGSYGIG R+++A++E GI Sbjct: 407 IEVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFLA 466 Query: 342 DSVAPF 347 F Sbjct: 467 KRSCSF 472 >gi|227503402|ref|ZP_03933451.1| prolyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] gi|227075905|gb|EEI13868.1| prolyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] Length = 594 Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 93/217 (42%), Positives = 137/217 (63%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G + + + GIY+WLPLG +AL + ++R+E Sbjct: 9 RLSELFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGIYTWLPLGLRALRKIEDVVRQEM 68 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM P L + + ++ R+ YG + RL DR + ++ GPTHEE+ + + Sbjct: 69 DAIGGQEMLFPALLPREPYEKTNRWVEYGPNLFRLQDRKNADLLLGPTHEEMFANAVKDM 128 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF+MKD+YSFD+ EG SY + +Y Sbjct: 129 YSSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFVMKDSYSFDMNDEGLDSSYARHRKAY 188 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 +F RL + +A SG +GG S EF+ L++ GE Sbjct: 189 QNVFDRLEIDYAICKATSGAMGGSASEEFLALSEVGE 225 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/156 (37%), Positives = 86/156 (55%), Gaps = 5/156 (3%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+N+ A RGIE+GHIF G KY+ +GK MGSYGIG R++A Sbjct: 419 DPAPDNQGTLALQRGIELGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGIGISRMLA 478 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + E HD KG+ WP +VAP+++ + + D +A +K+ LS+ G +V +DD + Sbjct: 479 VLAEQRHDDKGLNWPVAVAPYQVH-VAVANKDAAAMEAGDKLVEELSQAGLEVLFDDRPK 537 Query: 387 -QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +F A+LLG P IVG F D +E++ R Sbjct: 538 VSPGVKFKDAELLGMPFVAIVGRAF-KDGIIELRIR 572 >gi|309807201|ref|ZP_07701175.1| proline--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|308166422|gb|EFO68627.1| proline--tRNA ligase [Lactobacillus iners LactinV 03V1-b] Length = 472 Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 129/218 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF R G++ P+ A SG +GG S EF A GE Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGE 218 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 37/66 (56%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M+A F +GK + MGSYGIG R+++A++E GI Sbjct: 407 IEVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFLA 466 Query: 342 DSVAPF 347 F Sbjct: 467 KRSCSF 472 >gi|309808806|ref|ZP_07702691.1| proline--tRNA ligase [Lactobacillus iners LactinV 01V1-a] gi|308167932|gb|EFO70065.1| proline--tRNA ligase [Lactobacillus iners LactinV 01V1-a] Length = 472 Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 129/218 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF R G++ P+ A SG +GG S EF A GE Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGE 218 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 37/66 (56%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M+A F +GK + MGSYGIG R+++A++E GI Sbjct: 407 IEVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFLA 466 Query: 342 DSVAPF 347 F Sbjct: 467 KRSCSF 472 >gi|302191444|ref|ZP_07267698.1| prolyl-tRNA synthetase [Lactobacillus iners AB-1] Length = 566 Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 129/218 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF R G++ P+ A SG +GG S EF A GE Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGE 218 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 95/164 (57%), Gaps = 8/164 (4%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M+A F +GK + MGSYGIG R+++A++E GI WP Sbjct: 407 IEVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFWP 466 Query: 342 DSVAPFKISLI--NIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 VAPF+I +I N+K +Q V E+I++ DV +DD E+ G +F ADL+ Sbjct: 467 KEVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSD----KYDVLYDDRNERPGVKFNDADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P+++IVG + VS+ VE+K +MSL+ + Y S Sbjct: 523 GAPIRIIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKEL 565 >gi|325913484|ref|ZP_08175850.1| proline--tRNA ligase [Lactobacillus iners UPII 60-B] gi|325477253|gb|EGC80399.1| proline--tRNA ligase [Lactobacillus iners UPII 60-B] Length = 566 Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 129/218 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF R G++ P+ A SG +GG S EF A GE Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGE 218 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 95/164 (57%), Gaps = 8/164 (4%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M+A F +GK + MGSYGIG R+++A++E GI WP Sbjct: 407 IEVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFWP 466 Query: 342 DSVAPFKISLI--NIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 VAPF+I +I N+K +Q V E+I++ DV +DD E+ G +F ADL+ Sbjct: 467 KEVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSD----KYDVLYDDRNERPGVKFNDADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P+++IVG + VS+ VE+K +MSL+ + Y S Sbjct: 523 GAPIRIIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKEL 565 >gi|315653428|ref|ZP_07906350.1| proline--tRNA ligase [Lactobacillus iners ATCC 55195] gi|315489353|gb|EFU78993.1| proline--tRNA ligase [Lactobacillus iners ATCC 55195] Length = 487 Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 129/218 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 16 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 75 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 76 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 135 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 136 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 195 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF R G++ P+ A SG +GG S EF A GE Sbjct: 196 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGE 233 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 37/66 (56%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M+A F +GK + MGSYGIG R+++A++E GI Sbjct: 422 IEVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFLA 481 Query: 342 DSVAPF 347 F Sbjct: 482 KRSCSF 487 >gi|329919866|ref|ZP_08276804.1| proline--tRNA ligase [Lactobacillus iners SPIN 1401G] gi|328936956|gb|EGG33386.1| proline--tRNA ligase [Lactobacillus iners SPIN 1401G] Length = 566 Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 129/218 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF R G++ P+ A SG +GG S EF A GE Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGE 218 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 95/164 (57%), Gaps = 8/164 (4%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M+A F +GK + MGSYGIG R+++A++E GI WP Sbjct: 407 IEVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFWP 466 Query: 342 DSVAPFKISLI--NIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 VAPF+I +I N+K +Q V E+I++ DV +DD E+ G +F ADL+ Sbjct: 467 KEVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSD----KYDVLYDDRNERPGVKFNDADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P+++IVG + VS+ VE+K +MSL+ + Y S Sbjct: 523 GAPIRIIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKEL 565 >gi|325911837|ref|ZP_08174241.1| proline--tRNA ligase [Lactobacillus iners UPII 143-D] gi|325476343|gb|EGC79505.1| proline--tRNA ligase [Lactobacillus iners UPII 143-D] Length = 566 Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 129/218 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF R G++ P+ A SG +GG S EF A GE Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGE 218 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 94/164 (57%), Gaps = 8/164 (4%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M+A F +GK + MGSYGIG R+++A++E I WP Sbjct: 407 IEVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNSIFWP 466 Query: 342 DSVAPFKISLI--NIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 VAPF+I +I N+K +Q V E+I++ DV +DD E+ G +F ADL+ Sbjct: 467 KEVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSD----KYDVLYDDRNERPGVKFNDADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P+++IVG + VS+ VE+K +MSL+ + Y S Sbjct: 523 GAPIRIIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKEL 565 >gi|309804213|ref|ZP_07698290.1| proline--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|312875784|ref|ZP_07735776.1| proline--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|308163616|gb|EFO65886.1| proline--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|311088688|gb|EFQ47140.1| proline--tRNA ligase [Lactobacillus iners LEAF 2053A-b] Length = 566 Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 129/218 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF R G++ P+ A SG +GG S EF A GE Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGE 218 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 95/164 (57%), Gaps = 8/164 (4%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M+A F +GK + MGSYGIG R+++A++E GI WP Sbjct: 407 IEVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFWP 466 Query: 342 DSVAPFKISLI--NIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 VAPF+I +I N+K +Q V E+I++ DV +DD E+ G +F ADL+ Sbjct: 467 KEVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSD----KYDVLYDDRNERPGVKFNDADLI 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P+++IVG + VS+ VE+K +MSL+ + Y S Sbjct: 523 GAPIRIIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKEL 565 >gi|259501582|ref|ZP_05744484.1| proline-tRNA ligase [Lactobacillus iners DSM 13335] gi|259167100|gb|EEW51595.1| proline-tRNA ligase [Lactobacillus iners DSM 13335] Length = 581 Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 129/218 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 16 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 75 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 76 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 135 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 136 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 195 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y +IF R G++ P+ A SG +GG S EF A GE Sbjct: 196 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGE 233 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 95/164 (57%), Gaps = 8/164 (4%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGHIF GT Y+ M+A F +GK + MGSYGIG R+++A++E GI WP Sbjct: 422 IEVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFWP 481 Query: 342 DSVAPFKISLI--NIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 VAPF+I +I N+K +Q V E+I++ DV +DD E+ G +F ADL+ Sbjct: 482 KEVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSD----KYDVLYDDRNERPGVKFNDADLI 537 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P+++IVG + VS+ VE+K +MSL+ + Y S Sbjct: 538 GAPIRIIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKEL 580 >gi|118472270|ref|YP_886958.1| prolyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] gi|302595855|sp|A0QVM0|SYP_MYCS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118173557|gb|ABK74453.1| prolyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] Length = 585 Score = 199 bits (506), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 139/223 (62%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G + GIYSWLPLG + L + ++R E Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYVRAVGPGIYSWLPLGLRVLRKIENVVRSEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ +P L + + R+ YG + RL DR + + GPTHEE+ T + Sbjct: 64 NAIGAQEILLPALLPRGPYETTNRWTEYGDTLFRLQDRRNNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFD+ +G K++Y + +Y Sbjct: 124 YSSYKDFPVILYQIQTKYRDEARPRAGILRGREFVMKDSYSFDVDDDGLKNAYYQHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF RLG++ + + A SG +GG S EF+ ++ GE T V C Sbjct: 184 QRIFARLGVRYVIVSAVSGAMGGSASEEFLAESEVGEDTFVRC 226 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 88/148 (59%), Gaps = 2/148 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 SARGIE+GHIF G KY+ SA G DGK + MGSYGIG R+VA + E HD Sbjct: 420 TSARGIEIGHIFQLGRKYTDAFSADVLGEDGKPLRLTMGSYGIGVSRLVAVIAEQQHDQL 479 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP SVAPF + ++ + D R ++ A L ++G +V +DD G +F A+ Sbjct: 480 GLRWPSSVAPFDVHVV-VANKDAGARAGAAELVADLDRLGHEVLFDDRQASPGVKFKDAE 538 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 LLG P V+VG + +D VE+++R TG Sbjct: 539 LLGMPWIVVVGRGW-ADGVVELRNRFTG 565 >gi|46190981|ref|ZP_00120791.2| COG0442: Prolyl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|317482435|ref|ZP_07941452.1| prolyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] gi|316916095|gb|EFV37500.1| prolyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] Length = 594 Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 97/212 (45%), Positives = 136/212 (64%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE N GA Sbjct: 2 FLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREEINGIGA 61 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + SY+ Sbjct: 62 QEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDMYSSYK 121 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 +LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y RIF Sbjct: 122 DLPVTLYQIQTKYRDEFRPRAGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAYERIFQ 181 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RL LK +P+ A SGP+GG S EF+ GE Sbjct: 182 RLDLKYVPVFAMSGPMGGSASEEFLAPMPIGE 213 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD G+ Sbjct: 428 RGVEIGQVFQLGLKYSKALDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLA 487 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP + ++ D V + EK+ A L G +V +DD + G +F A+L+ Sbjct: 488 WPSVIAPAAVHVVAT-GKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELI 546 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL +VG +V+D +E++ R Sbjct: 547 GVPLVAVVGRDYVNDGTIELRDR 569 >gi|37522094|ref|NP_925471.1| prolyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] gi|81834313|sp|Q7NHL0|SYP_GLOVI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|35213093|dbj|BAC90466.1| prolyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] Length = 589 Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 106/230 (46%), Positives = 141/230 (61%), Gaps = 8/230 (3%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIRE 59 R S F L+E P +A SHKL+LR G I + G+Y++ PL Q+ L V I+RE Sbjct: 3 RLSSSFFFTLREAPAEAVAVSHKLLLRAGFIRPLAGTAGLYAYGPLMQRVLQKVGRIVRE 62 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE--MLRLAD-RNDKAMIYG--PTHEEVM 114 E + TGA E LQ A++W ESGR+ Y ++ M L D + ++A YG PTHEE + Sbjct: 63 EMDATGAQEALFCQLQPAEIWKESGRWTVYTQDGTMFTLKDGQGEQAREYGLGPTHEEAV 122 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 D R+ + SY+ LPF YQ+Q KFR+E RPRFG+MR REF+MKD YSF TPE +Y Sbjct: 123 CDFVRASLNSYKQLPFHLYQVQTKFRNEKRPRFGLMRGREFIMKDGYSFHATPESLDETY 182 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 M+ +Y +F R GL + A+SG IGG SHEF+ L D GE T ++C Sbjct: 183 RAMYRAYTNMFRRCGLDFRAVEADSGAIGGSGSHEFMALCDIGEDTILYC 232 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 69/164 (42%), Positives = 94/164 (57%), Gaps = 1/164 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 PE SARG+E+GHIF GTKYS PM F G+ MG YG+G R+ AAV+E Sbjct: 410 PEATLQSARGVELGHIFKLGTKYSRPMQVLFADEAGELQPALMGCYGVGVSRLPAAVVEQ 469 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 SHD GI+WP ++AP+++ L+ + R A E++Y L+ G D DD E+ G + Sbjct: 470 SHDNDGILWPIAIAPYQVVLVPANVAVEAQRQAAEELYRSLTAAGIDTLLDDRPERAGVK 529 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 F ADL+G PL+V +G + VEIK R G E + L E + Sbjct: 530 FKDADLIGIPLRVTLGRDLEA-GLVEIKVRGGGAAEKVPLAEAL 572 >gi|241190576|ref|YP_002967970.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195982|ref|YP_002969537.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|240248968|gb|ACS45908.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250536|gb|ACS47475.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793563|gb|ADG33098.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9] Length = 605 Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 97/218 (44%), Positives = 137/218 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG L+ + +IREE Sbjct: 5 LRMSTLFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLAVLNKIEDVIREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 65 INGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y + Sbjct: 125 MYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTVDEEGMRQAYMDERGA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RL LK +P+ A SGP+GG S EF+ GE Sbjct: 185 YERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGE 222 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 88/156 (56%), Gaps = 2/156 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD KG+ Sbjct: 438 RGVEIGQVFQLGLKYSEALDLKVLNQNGKTVPVWMGCYGIGVSRVLACIAETHHDDKGLA 497 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP ++AP ++ ++ D+ +A E++ LS G +V +DD + G +F A+L+ Sbjct: 498 WPMNIAPAQVHVM-ATGKDEAAFEAAERLVDELSANGIEVLYDDRRKVSPGVKFKDAELI 556 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+ + G V++ +E++ R E++S++ V Sbjct: 557 GVPIIAVAGRDTVNNGTIEVRDRDGSNSENISVDSV 592 >gi|291457352|ref|ZP_06596742.1| proline--tRNA ligase [Bifidobacterium breve DSM 20213] gi|291381187|gb|EFE88705.1| proline--tRNA ligase [Bifidobacterium breve DSM 20213] Length = 597 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 136/215 (63%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG K L+ + IIREE N Sbjct: 2 STMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLKVLNKIEDIIREEING 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 62 IGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDMYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y R Sbjct: 122 SYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTIDEEGMRKAYYDERGAYER 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RL LK +P+ A SGP+GG S EF+ GE Sbjct: 182 IFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGE 216 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 2/165 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD G+ Sbjct: 431 RGVEIGQVFQLGLKYSKALDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLA 490 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP + ++ D+ + EK+ A L G +V +DD + G +F A+L+ Sbjct: 491 WPSVIAPAAVHVVAT-GKDEKAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELI 549 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G PL +VG +V+D +EI+ R + + E + RF+ Sbjct: 550 GVPLVAVVGRDYVNDGTIEIRDRNGENKVAVPAAEAAGTLADRFA 594 >gi|149198845|ref|ZP_01875887.1| prolyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] gi|149138043|gb|EDM26454.1| prolyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] Length = 577 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 99/227 (43%), Positives = 141/227 (62%), Gaps = 1/227 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++E P+DA+ ASH ++R G I S GIY+ LPL ++ + IIREE Sbjct: 1 MRLSKLVGKRVKEAPKDAQSASHIFLMRGGYIRPVSTGIYTLLPLAKRMTTKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ +P + A++W ESGRYDS + +LR DRN K M+ THEE + + R+ Sbjct: 61 MEAVDCQEIMMPVVNPAEIWQESGRYDSVDQSLLRFKDRNQKDMVLAMTHEEAVCHMART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ K+RDE R R G++R REF MKDAYSF + + Y+++ + Sbjct: 121 EITSYKQLPASVYQIQTKYRDEARARAGLIRVREFTMKDAYSFHDSEKCLSDYYDRVHQA 180 Query: 181 YLRIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y RIF R+GL + + +++G IGG LSHEF+ ++D GE +F S D Sbjct: 181 YERIFERVGLSDCVSIESDAGMIGGSLSHEFMAISDIGEDTLFLSPD 227 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 88/162 (54%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVG+IF GTKYS M + +GK MG YGIG R +A+V E +D G + Sbjct: 407 KGIEVGNIFQLGTKYSDSMGVRYLDKNGKAQIPTMGCYGIGVGRALASVCEQRNDKWGPV 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP S+AP+++ +I + ++ E++Y L K G +V +DD + G F ADL+G Sbjct: 467 WPISIAPYQVHVIALTGGQPEIKEEAEELYKNLQKEGIEVIFDDRDPKPGFAFNDADLIG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 PL++I+ K ++ E K R +E + E + +R Sbjct: 527 VPLRLIISKKSMAQDSYEFKTRDGSEKELIPKAEAFEFIVNR 568 >gi|312195504|ref|YP_004015565.1| prolyl-tRNA synthetase [Frankia sp. EuI1c] gi|311226840|gb|ADP79695.1| prolyl-tRNA synthetase [Frankia sp. EuI1c] Length = 580 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 89/218 (40%), Positives = 140/218 (64%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ F+ L+E+P DAE A+H+L++R G + + + GIYS+LPLG + L + A++R+E Sbjct: 14 SRTFIRTLREDPADAETANHRLLVRGGYVRKAASGIYSYLPLGLRVLRRIEAVVRQEMAA 73 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ +P L +LW SGR+ YG M R+ DR GPTHEE++T + + + Sbjct: 74 AGCQELLMPALMPRELWDRSGRWADYGDLMFRVVDRKGTEFCLGPTHEELITSLVANELG 133 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 +R+LP +QIQ K+RDELRPR G++RSR+F+MKDAY+F + + +Y +M+ +Y R Sbjct: 134 GHRDLPLRVFQIQTKYRDELRPRSGLVRSRDFVMKDAYTFHADEDSLRETYREMYAAYER 193 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 +F R GL+ + A++G +GG + EF+ + GE V Sbjct: 194 VFTRCGLRFRAVEAQAGEMGGGRNQEFMAPTEIGEDLV 231 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 6/180 (3%) Query: 260 SDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +DV N + D+ P++ R +E+GHIF GT+YS+P+ ATF A G + MG Y Sbjct: 395 ADVVNVRAGDASPDDSGPLTLERAVEIGHIFQLGTRYSVPLGATFLDAAGVERPALMGCY 454 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++ VIE HD GI WP +AP+ + +I + +V D + L+ VG Sbjct: 455 GIGISRLMSVVIEQHHDEHGIRWPAELAPYDVQVIPLG--RRVDEDLVRSVADMLAGVGL 512 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD G G +FA ADL+G P QV++G + ++ E++ R +++L E+ N Sbjct: 513 EVLVDDRSGASAGVKFADADLIGAPFQVVLGRR-AAEGIAELRTRDRSTVTEVALTELTN 571 >gi|306785673|ref|ZP_07423995.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu003] gi|308329673|gb|EFP18524.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu003] Length = 582 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 136/217 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ASHKL++R G I + G+YSWLPLG + L N+ +IR+E Sbjct: 4 RMSELFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRNIERVIRDEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTQYGDSVFRLKDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RL ++ + + A SG +GG S EF+ + +GE Sbjct: 184 QRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGE 220 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 86/148 (58%), Gaps = 2/148 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V ARGIE+GHIF G+KY+ +A G DGK + MGSYGIG R+VA V E HD Sbjct: 416 VMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDEL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP +VAPF + L+ I D R + A L ++G +V DD G +F A+ Sbjct: 476 GLRWPSTVAPFDVHLV-IANKDAQARAGATALAADLDRLGVEVLLDDRQASAGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 LLG P V+VG + +D VE++ R +G Sbjct: 535 LLGMPWIVVVGRGW-ADGVVELRDRFSG 561 >gi|289178315|gb|ADC85561.1| Prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis BB-12] Length = 615 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 97/218 (44%), Positives = 137/218 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG L+ + +IREE Sbjct: 15 LRMSTLFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLAVLNKIEDVIREE 74 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 75 INGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 134 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y + Sbjct: 135 MYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTVDEEGMRQAYMDERGA 194 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RL LK +P+ A SGP+GG S EF+ GE Sbjct: 195 YERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGE 232 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 88/156 (56%), Gaps = 2/156 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD KG+ Sbjct: 448 RGVEIGQVFQLGLKYSEALDLKVLNQNGKTVPVWMGCYGIGVSRVLACIAETHHDDKGLA 507 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP ++AP ++ ++ D+ +A E++ LS G +V +DD + G +F A+L+ Sbjct: 508 WPMNIAPAQVHVM-ATGKDEAAFEAAERLVDELSANGIEVLYDDRRKVSPGVKFKDAELI 566 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+ + G V++ +E++ R E++S++ V Sbjct: 567 GVPIIAVAGRDTVNNGTIEVRDRDGSNSENISVDSV 602 >gi|15609982|ref|NP_217361.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv] gi|148662686|ref|YP_001284209.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|148824035|ref|YP_001288789.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis F11] gi|161350062|ref|NP_337423.2| prolyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|167967198|ref|ZP_02549475.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|215404817|ref|ZP_03416998.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|215412677|ref|ZP_03421395.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|215428284|ref|ZP_03426203.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T92] gi|215431786|ref|ZP_03429705.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|218754593|ref|ZP_03533389.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503] gi|219558862|ref|ZP_03537938.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T17] gi|253798069|ref|YP_003031070.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 1435] gi|254232940|ref|ZP_04926267.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis C] gi|254365491|ref|ZP_04981536.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis str. Haarlem] gi|254551909|ref|ZP_05142356.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260201976|ref|ZP_05769467.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|260206156|ref|ZP_05773647.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis K85] gi|289444396|ref|ZP_06434140.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289553367|ref|ZP_06442577.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 605] gi|289571033|ref|ZP_06451260.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T17] gi|289575546|ref|ZP_06455773.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis K85] gi|289746643|ref|ZP_06506021.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|289751506|ref|ZP_06510884.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T92] gi|289754953|ref|ZP_06514331.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|289763021|ref|ZP_06522399.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis GM 1503] gi|297635458|ref|ZP_06953238.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207] gi|297732457|ref|ZP_06961575.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506] gi|298526313|ref|ZP_07013722.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|306777129|ref|ZP_07415466.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu001] gi|306781035|ref|ZP_07419372.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu002] gi|306789713|ref|ZP_07428035.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu004] gi|306794347|ref|ZP_07432649.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu005] gi|306798770|ref|ZP_07437072.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu006] gi|306804616|ref|ZP_07441284.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu008] gi|306807350|ref|ZP_07444018.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu007] gi|306968909|ref|ZP_07481570.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu009] gi|306973245|ref|ZP_07485906.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu010] gi|307080954|ref|ZP_07490124.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu011] gi|307085549|ref|ZP_07494662.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu012] gi|313659789|ref|ZP_07816669.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475] gi|2501040|sp|O05814|SYP_MYCTU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|2078014|emb|CAB08445.1| PROBABLE PROLYL-TRNA SYNTHETASE PROS (PROLINE--TRNA LIGASE) (PRORS) (GLOBAL RNA SYNTHESIS FACTOR) (PROLINE TRANSLASE) [Mycobacterium tuberculosis H37Rv] gi|124601999|gb|EAY61009.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis C] gi|134151004|gb|EBA43049.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis str. Haarlem] gi|148506838|gb|ABQ74647.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|148722562|gb|ABR07187.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis F11] gi|253319572|gb|ACT24175.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 1435] gi|289417315|gb|EFD14555.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289437999|gb|EFD20492.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 605] gi|289539977|gb|EFD44555.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis K85] gi|289544787|gb|EFD48435.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T17] gi|289687171|gb|EFD54659.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|289692093|gb|EFD59522.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T92] gi|289695540|gb|EFD62969.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|289710527|gb|EFD74543.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis GM 1503] gi|298496107|gb|EFI31401.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|308214498|gb|EFO73897.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu001] gi|308326143|gb|EFP14994.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu002] gi|308333812|gb|EFP22663.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu004] gi|308337323|gb|EFP26174.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu005] gi|308340981|gb|EFP29832.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu006] gi|308346273|gb|EFP35124.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu007] gi|308348796|gb|EFP37647.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu008] gi|308353522|gb|EFP42373.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu009] gi|308357363|gb|EFP46214.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu010] gi|308361316|gb|EFP50167.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu011] gi|308364916|gb|EFP53767.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu012] gi|323718544|gb|EGB27714.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis CDC1551A] gi|326904458|gb|EGE51391.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis W-148] gi|328457842|gb|AEB03265.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 4207] Length = 582 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 136/217 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ASHKL++R G I + G+YSWLPLG + L N+ +IR+E Sbjct: 4 RMSELFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRNIERVIRDEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTQYGDSVFRLKDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RL ++ + + A SG +GG S EF+ + +GE Sbjct: 184 QRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGE 220 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 86/148 (58%), Gaps = 2/148 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V ARGIE+GHIF G+KY+ +A G DGK + MGSYGIG R+VA V E HD Sbjct: 416 VMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDEL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP +VAPF + L+ I D R + A L ++G +V DD G +F A+ Sbjct: 476 GLRWPSTVAPFDVHLV-IANKDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 LLG P V+VG + +D VE++ R +G Sbjct: 535 LLGMPWIVVVGRGW-ADGVVELRDRFSG 561 >gi|260187861|ref|ZP_05765335.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A] gi|289448507|ref|ZP_06438251.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis CPHL_A] gi|289421465|gb|EFD18666.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis CPHL_A] Length = 582 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 136/217 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ASHKL++R G I + G+YSWLPLG + L N+ +IR+E Sbjct: 4 RMSELFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRNIERVIRDEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTQYGDSVFRLKDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RL ++ + + A SG +GG S EF+ + +GE Sbjct: 184 QRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGE 220 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 86/148 (58%), Gaps = 2/148 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V ARGIE+GHIF G+KY+ +A G DGK + MGSYGIG R+VA V E HD Sbjct: 416 VMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDEL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP +VAPF + L+ I D R + A L ++G +V DD G +F A+ Sbjct: 476 GLRWPSTVAPFDVHLV-IANKDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 LLG P V+VG + +D VE++ R +G Sbjct: 535 LLGMPWIVVVGRGW-ADGVVELRDRFSG 561 >gi|197124440|ref|YP_002136391.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. K] gi|226731425|sp|B4UGI0|SYP_ANASK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|196174289|gb|ACG75262.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. K] Length = 574 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 104/221 (47%), Positives = 140/221 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S+ F+P L+E P DA++ASHKL++R G I Q GIY +LPL +++L V AI+REE Sbjct: 4 VRYSQAFIPTLKEAPADAQVASHKLLVRAGFIRQLGAGIYDYLPLAKRSLAKVEAIVREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E +P L A++W ESGR+D G M RL DR G THEE+ T + R Sbjct: 64 MDAIGGQEFYLPALHPAEIWKESGRWDVMGDNMFRLKDRKGGDYCLGMTHEEIFTAVARD 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP +YQIQ KFRDE RP+ G++R R+F MKDAYSFD+ G SY + Sbjct: 124 ELRSYRQLPQVWYQIQTKFRDEPRPKSGLLRVRQFTMKDAYSFDVDRAGLDRSYEDQRRA 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y +IF R GL + ++A SG +GG S EF+V + GE V Sbjct: 184 YEKIFTRCGLDFVAVQAHSGSMGGSESSEFMVRTEAGEDLV 224 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 67/161 (41%), Positives = 98/161 (60%), Gaps = 1/161 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +E+GHIF GTKYS M AT A+GK + MGSYGIG R++AA IE HD GI+ Sbjct: 409 KALEIGHIFKLGTKYSESMKATVLDAEGKQVPIVMGSYGIGVERILAAAIELHHDDNGIV 468 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P ++APF +++ + ++ R A E++ A L K G +V +DD E+ G +F ADLLG Sbjct: 469 FPMAIAPFHATVLTLGPEPEL-RKAAEEVVAALGKEGVEVLFDDRDERAGVKFKDADLLG 527 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 P+++ VG K ++ VE K R G E + + EV A+ Sbjct: 528 IPIRIAVGKKGLAAGNVEWKLRKGGAVELVPVGEVARKAAE 568 >gi|269956006|ref|YP_003325795.1| prolyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269304687|gb|ACZ30237.1| prolyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] Length = 607 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 97/218 (44%), Positives = 137/218 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S F+ L+E+P DAE+ASH+L++R G I + + GIY+WLPLG + L V AI+REE Sbjct: 11 LRLSSLFVRTLREDPADAEVASHRLLIRAGYIRRAAPGIYTWLPLGLRVLAKVEAIVREE 70 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P L + + +GR++ YG + RL DR + PTHEE+ T + + Sbjct: 71 MAAIGGQEVHFPALLPREPYEATGRWEEYGPNLFRLQDRKRADYLLAPTHEEMFTLLVKD 130 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T +QIQ K+RDE RPR G++R REF+MKD+YSFD T G +Y + + Sbjct: 131 LYSSYKDLPLTLFQIQTKYRDEARPRAGLIRGREFVMKDSYSFDHTDAGLDEAYQRHRDA 190 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RLGL + + A SG +GG S EF+ + GE Sbjct: 191 YERIFTRLGLDYVIVSAMSGAMGGSRSEEFLSPSVIGE 228 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 82/144 (56%), Gaps = 3/144 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + +GK V MGSYGIG R +AA+ E++HD +G+ Sbjct: 441 ARGIEMGHIFQLGRKYAEALGLKVLDENGKAVTVTMGSYGIGVTRALAALAEANHDERGL 500 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP VAP + ++ +V DA ++ L G +V +DD + G +FA A+L Sbjct: 501 AWPAHVAPAHVHVVATGRGAEVF-DAAAELAEGLVANGVEVVYDDRPKVSPGVKFADAEL 559 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 LG ++V + ++D VE++ R Sbjct: 560 LGV-PLLVVVGRGLADGVVEVRPR 582 >gi|195978861|ref|YP_002124105.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975566|gb|ACG63092.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 613 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 91/207 (43%), Positives = 134/207 (64%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E ++ GA Sbjct: 2 LIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLAHRTIEKFKTIMRQEFDKIGA 61 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 +EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R +KSY+ Sbjct: 62 VEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTTLVRDAVKSYK 121 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP YQIQ K+RDE RPR G++R+REF+MKD YSF + + +Y+ +Y IF Sbjct: 122 QLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHQSYDDLDVTYDAYRQAYEAIFT 181 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVL 213 R GL + + G +GG S EF+ + Sbjct: 182 RAGLDFKGIIGDGGAMGGKDSQEFMAI 208 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 103/183 (56%), Gaps = 16/183 (8%) Query: 257 AATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ K ++ P+ V ARGIE+GHIF GT+YS M+A +G+ + M Sbjct: 411 AEYADIREVKEGETSPDGHGVLQFARGIEIGHIFKLGTRYSDSMAANILDENGRAVPIVM 470 Query: 315 GSYGIGAMRVVAAVIES------SHDGKG-------IIWPDSVAPFKISLINIKAHDQVC 361 G YGIG R+++AVIE S KG I +P +APF + LI + DQ Sbjct: 471 GCYGIGVSRILSAVIEQHARLFVSKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQEA 530 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +D EK+ A L G DV DD E++GS+F+ +DL+G P++V +G K ++ VEIK + Sbjct: 531 QDLTEKVEASLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTIGKK-AAEGIVEIKIK 589 Query: 422 LTG 424 TG Sbjct: 590 ATG 592 >gi|315226277|ref|ZP_07868065.1| proline--tRNA ligase [Parascardovia denticolens DSM 10105] gi|315120409|gb|EFT83541.1| proline--tRNA ligase [Parascardovia denticolens DSM 10105] Length = 590 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 106/268 (39%), Positives = 150/268 (55%), Gaps = 6/268 (2%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+++P DA++ S KL++R G I + G+YSWLPLG K L+ + AIIREE N Sbjct: 2 STLFLRTLRDDPADADVDSAKLLIRAGYIRKIGPGLYSWLPLGLKVLNKIEAIIREEINA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P + + + S R++ YG + R DR+ + PTHEE+ T + + Sbjct: 62 LGAQEVHFPAMMPREPYQMSNRWEEYGDNIFRFKDRHGADYLLAPTHEEMFTLMVKDMYT 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R R+F+MKDAYSFD+ EG K SY +Y R Sbjct: 122 SYKDLPVTLYQIQGKYRDEFRPRAGMIRGRQFVMKDAYSFDIDEEGLKKSYLAERAAYER 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 IFHRL + + + A SGP+GG S EF+ GE + + + + T D + Sbjct: 182 IFHRLAVDYVIVHAVSGPMGGSESEEFLAPLPIGEDTFALAPSGKAWNVEALTTPAMDPV 241 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + P A D + DSL Sbjct: 242 DYSQ------TPAATVVDTPDSPTIDSL 263 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 62/155 (40%), Positives = 90/155 (58%), Gaps = 2/155 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS M +GK V MG YGIG RV++ + E+ HD KG+I Sbjct: 425 RGVEIGQVFQLGLKYSKAMGLNVLNQNGKAVPVWMGCYGIGVSRVMSCIAEAHHDDKGLI 484 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP SVAP ++ LI DQ D E + L K +V +DD + G +F ++LL Sbjct: 485 WPLSVAPAQVHLIAT-GKDQKAYDLAESLLGDLEKADVEVLYDDRAKMSPGVKFKDSELL 543 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G P+ V+VG +SD VEI++R TG ++ + L++ Sbjct: 544 GLPMIVVVGRDTLSDGTVEIRNRATGEKDVVPLDQ 578 >gi|238061935|ref|ZP_04606644.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149] gi|237883746|gb|EEP72574.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149] Length = 582 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 98/219 (44%), Positives = 133/219 (60%), Gaps = 1/219 (0%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E+P DAE+ SH+L+LR G I + + G Y+WLPLG+ LD V ++R E G Sbjct: 2 LLRTLREDPADAEVPSHRLLLRAGYIRRAAPGGYTWLPLGKLVLDRVTDVVRGEMTAIGD 61 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P L A+ + SGR+ YG ++ LADR + PTHEE+ + + SYR Sbjct: 62 QEVHFPALLPAEPYRTSGRWTEYGDDIFTLADRRGAEHLLAPTHEELAALLVKDLFTSYR 121 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 + P T +Q+Q KFRDE RPR G++R REFLMKDAYSFDL G +Y + +Y RIF Sbjct: 122 DFPVTLFQVQTKFRDEARPRAGLLRGREFLMKDAYSFDLDDAGLTAAYERHRAAYQRIFD 181 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 +LGL+ +RA SG +GG S EF+ GE T V C+ Sbjct: 182 QLGLEYAVVRATSGAMGGSASEEFLAATQVGEDTFVGCT 220 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G +Y+ + G GK MG YGIG R VAA+ E HD +G++ Sbjct: 414 RGIEVGHIFQLGRRYTDAFTVDVLGPAGKPVRPTMGCYGIGVSRAVAAIAEQHHDERGLV 473 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +VAP + L+ Q+ DA + RL+ G V DD G +F A+L+ Sbjct: 474 WPAAVAPCDVHLVAAGKGPQL--DAALDLGTRLAAAGLRVLVDDRTHVSAGVKFTDAELI 531 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P V+VG + +D VE++ R TG R ++ + +++ Sbjct: 532 GLPRAVVVGRRL-ADGYVELRDRATGERTELPVAGLVD 568 >gi|31794022|ref|NP_856515.1| prolyl-tRNA synthetase [Mycobacterium bovis AF2122/97] gi|121638725|ref|YP_978949.1| prolyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991217|ref|YP_002645906.1| prolyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|81834897|sp|Q7TXQ5|SYP_MYCBO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152112932|sp|A1KMI8|SYP_MYCBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|31619616|emb|CAD95055.1| PUTATIVE PROLYL-TRNA SYNTHETASE PROS (PROLINE--TRNA LIGASE) (PRORS) (GLOBAL RNA SYNTHESIS FACTOR) (PROLINE TRANSLASE) [Mycobacterium bovis AF2122/97] gi|121494373|emb|CAL72854.1| Putative prolyl-tRNA synthetase proS [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774332|dbj|BAH27138.1| prolyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] Length = 582 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 135/217 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ASHKL++R G I + G+YSWLPLG + L N+ +IR+E Sbjct: 4 RMSELFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRNIERVIRDEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTQYGDSVFRLKDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y +Y Sbjct: 124 YSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDIDAAGLKAAYRAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RL ++ + + A SG +GG S EF+ + +GE Sbjct: 184 QRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGE 220 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 86/148 (58%), Gaps = 2/148 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V ARGIE+GHIF G+KY+ +A G DGK + MGSYGIG R+VA V E HD Sbjct: 416 VMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDEL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP +VAPF + L+ I D R + A L ++G +V DD G +F A+ Sbjct: 476 GLRWPSTVAPFDVHLV-IANKDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 LLG P V+VG + +D VE++ R +G Sbjct: 535 LLGMPWIVVVGRGW-ADGVVELRDRFSG 561 >gi|306836356|ref|ZP_07469334.1| proline--tRNA ligase [Corynebacterium accolens ATCC 49726] gi|304567716|gb|EFM43303.1| proline--tRNA ligase [Corynebacterium accolens ATCC 49726] Length = 594 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 92/217 (42%), Positives = 136/217 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G + + + GIY+WLPLG + L + ++R+E Sbjct: 9 RLSELFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGIYTWLPLGLRTLRKIEDVVRQEM 68 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM P L + + ++ R+ YG + RL DR + ++ GPTHEE+ + + Sbjct: 69 DAIGGQEMLFPALLPREPYEKTNRWVEYGPNLFRLQDRKNADLLLGPTHEEMFANAVKDM 128 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF+MKD+YSFD+ EG SY + +Y Sbjct: 129 YSSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFVMKDSYSFDMNDEGLDSSYARHRKAY 188 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 +F RL + +A SG +GG S EF+ L++ GE Sbjct: 189 QNVFDRLEIDYAICKATSGAMGGSASEEFLALSEVGE 225 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/156 (37%), Positives = 86/156 (55%), Gaps = 5/156 (3%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+N+ A RGIE+GHIF G KY+ +GK MGSYGIG R++A Sbjct: 419 DPAPDNQGTLALQRGIELGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGIGISRMLA 478 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + E HD KG+ WP +VAP+++ + + D +A +K+ LS+ G +V +DD + Sbjct: 479 VLAEQRHDDKGLNWPVAVAPYQVH-VAVANKDAAAMEAGDKLVEELSQAGLEVLFDDRPK 537 Query: 387 -QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +F A+LLG P IVG F D +E++ R Sbjct: 538 VSPGVKFKDAELLGMPFVAIVGRAF-KDGIIELRIR 572 >gi|184201256|ref|YP_001855463.1| prolyl-tRNA synthetase [Kocuria rhizophila DC2201] gi|226701301|sp|B2GKS1|SYP_KOCRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|183581486|dbj|BAG29957.1| prolyl-tRNA synthetase [Kocuria rhizophila DC2201] Length = 606 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 113/298 (37%), Positives = 159/298 (53%), Gaps = 24/298 (8%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ SHKL++R G I + + GIY+WLPLG L V I+REE Sbjct: 3 LRLSSLFLRTLREDPVDADVDSHKLLVRAGYIRRAAPGIYTWLPLGLAVLRRVEGIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ P L + + S R+ YG+ + RL DR + PTHEE+ T + + Sbjct: 63 MDAIGAQEVHFPALLPREPYEASNRWTEYGENLFRLQDRKGADYLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G +Y K + Sbjct: 123 MYSSYKDLPVMLYQIQTKYRDEARPRAGLLRGREFIMKDSYSFDVDDAGLDDAYAKHRAA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE------------------TQVF 222 Y+RIF RLGL + + A SG +GG S EF+ + GE T V Sbjct: 183 YVRIFERLGLPVVAVSATSGAMGGSRSEEFMHPSVVGEDTFVRSAGGYAANVEAVTTVVP 242 Query: 223 CSKDFMDFPIPS-----ENTDFDDIISL-NSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D D P ++ D ++S N + + P+ A + N L SLPE Sbjct: 243 EPVDCTDAPAAQVHRTPDSPTIDTLVSRSNELHPREGQPWTAADTLKNVLLSVSLPEG 300 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 91/158 (57%), Gaps = 3/158 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARG+E+GH+F G KY+ + +GK V MGSYGIG R +AAV E HD G+ Sbjct: 435 ARGMEMGHVFQLGRKYAEALGLKVLDNNGKLVTVTMGSYGIGVTRALAAVAEFYHDEHGL 494 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 +WP +++P + ++ +V +A E+I A L G V +DD + G +F A+L Sbjct: 495 LWPRNLSPADVHVVATGKGPEVL-EAAEEIVAHLEAAGVSVLFDDRPKVSPGVKFRDAEL 553 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 LG P ++VG + ++D +E+K R +G D++ + V+ Sbjct: 554 LGVPTVLVVG-RGLADGVLELKDRRSGTSRDIARDRVV 590 >gi|76563495|gb|ABA46079.1| prolyl-tRNA synthetase [Streptococcus agalactiae A909] Length = 612 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 92/208 (44%), Positives = 131/208 (62%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E + GA Sbjct: 2 LIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQEFEKIGA 61 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 +EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R +KSY+ Sbjct: 62 VEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRDAVKSYK 121 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y +Y IF Sbjct: 122 QLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKAYEAIFT 181 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLA 214 R GL + + G +GG S EF+ + Sbjct: 182 RAGLDFKGIIGDGGAMGGKDSQEFMAVT 209 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 +RGIE+GHIF GT+YS M A +G+ + + MG YGIG R+++AVIE Sbjct: 435 SRGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVSRILSAVIEQHARLFVN 494 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P+ +APF + LI + DQ +D EKI A L G +V DD Sbjct: 495 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 554 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + +G Sbjct: 555 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASG 592 >gi|86160363|ref|YP_467148.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|114152165|sp|Q2IGK6|SYP1_ANADE RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|85776874|gb|ABC83711.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 575 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/221 (47%), Positives = 140/221 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R ++ F+P L+E P DA++ASHKL++R G I Q GIY +LPL +++L + AI+REE Sbjct: 4 VRYTQAFIPTLKEAPADAQVASHKLLVRAGFIRQLGAGIYDYLPLAKRSLTKIEAIVREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E +P L A++W ESGR++ G M RL DR G THEE+ T I R Sbjct: 64 MNAIGGQEFFLPALHPAEIWKESGRWEVMGDNMFRLKDRKGGDYGLGMTHEEIFTAIARD 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP +YQIQ KFRDE RP+ G++R R+F MKDAYSFD+ G SY + Sbjct: 124 ELRSYRQLPQVWYQIQTKFRDEPRPKSGLLRVRQFTMKDAYSFDVDRAGLDKSYEDQRQA 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y +IF R GL + ++A SG +GG S EF+V D GE V Sbjct: 184 YEKIFTRCGLDFVAVQAHSGSMGGSESSEFMVRTDAGEDLV 224 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/161 (43%), Positives = 97/161 (60%), Gaps = 1/161 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF GTKYS M AT A GK + MGSYGIG R++AA IE HD GI+ Sbjct: 409 KALEVGHIFKLGTKYSESMKATVLDAGGKQVPIVMGSYGIGVERILAAAIELHHDDNGIV 468 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P ++APF +++ + ++ R A E++ A L K G +V +DD E+ G +F ADLLG Sbjct: 469 FPMAIAPFHATVLTLGPEPEL-RKAAEEVVAALGKEGVEVLFDDRDERAGVKFKDADLLG 527 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 P++V VG K ++ VE K R G E + L EV A+ Sbjct: 528 IPIRVAVGKKGLAAGNVEWKLRRGGAVELVPLGEVARKAAE 568 >gi|229491433|ref|ZP_04385257.1| prolyl-tRNA synthetase [Rhodococcus erythropolis SK121] gi|229321718|gb|EEN87515.1| prolyl-tRNA synthetase [Rhodococcus erythropolis SK121] Length = 581 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 111/271 (40%), Positives = 154/271 (56%), Gaps = 7/271 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ASHKL++R G + + + G+YSWLPLG + L V ++REE Sbjct: 4 RLSHLFLRTLRDDPSDAEVASHKLLVRAGYVRRIAPGVYSWLPLGLRVLREVERVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ +P L D + S R+ YG + RL DR + GPTHEE+ + Sbjct: 64 NAIGGQEILLPALLPRDPYEASNRWTEYGPNLFRLKDRKGNDYMLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQ+Q K+RDE RPR G++R REFLMKD+YSFDLT EG SY +Y Sbjct: 124 YNSYKDFPVTLYQVQTKYRDEERPRAGILRGREFLMKDSYSFDLTDEGLTESYQAHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDFD 240 +IF RLG+K + + A SG +GG S EF+ ++ GE T V C + + + T Sbjct: 184 EKIFTRLGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRCLESGYAANVEAVKTVVP 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D I + + P A D N D+L Sbjct: 244 DSIPFDGL------PEAKVYDTANTPTIDTL 268 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 96/164 (58%), Gaps = 6/164 (3%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 VSARGIE+GH+F G KY+ + +GK MGSYG+G R+VA + E HD K Sbjct: 416 VSARGIEIGHVFQLGRKYTDVFTVDVLAENGKPVRPTMGSYGVGVSRLVAVIAEQHHDEK 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP V+P + L+ I D+ R+ E + A+L + G +V DD G +F ++ Sbjct: 476 GLRWPAEVSPADVYLV-IANKDETAREGAEGLAAQLDRAGLEVILDDRKASPGVKFKDSE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEVIN 436 L+G PL V+VG + +D KVEI+ R TG I + ++EE+I+ Sbjct: 535 LIGVPLIVVVGRGW-ADGKVEIRDRFTGESREIDANSAIEEIIS 577 >gi|313898260|ref|ZP_07831797.1| proline--tRNA ligase [Clostridium sp. HGF2] gi|312956642|gb|EFR38273.1| proline--tRNA ligase [Clostridium sp. HGF2] Length = 564 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 96/250 (38%), Positives = 146/250 (58%), Gaps = 10/250 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + L+EN +D + S L++R GMI + S GIY +P+G++ L + I+REE Sbjct: 1 MKLSKSYFYTLRENVKDEDSTSGNLLVRAGMIKKSSSGIYMIMPMGKRVLKKIEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + +++ +SGR +++G M L DR K + GPTHEE+ T Sbjct: 61 MDAAGAQELLMPAMIPEEIYEKSGRREAFGSNMFALKDRYQKNYVLGPTHEELFTMAAMM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P+ YQIQ KFRDE RPR+G++R REF+MKDAYSFD+ G + SY KMF + Sbjct: 121 KGSSYKDFPYNLYQIQTKFRDETRPRYGLIRVREFIMKDAYSFDIDEAGLQESYMKMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I R L ++A++G +GG LS EF + + GE D + E DF Sbjct: 181 YKNIMDRCNLNYKIVKADTGAMGGSLSEEFQAITEIGE----------DVVVTCEGCDFS 230 Query: 241 DIISLNSIVE 250 + + +++ Sbjct: 231 SNLEITEVID 240 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 92/158 (58%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVG+ F GTKY+ + ++ + K H V+MG YG G R +AA++E +D GI Sbjct: 400 CKGIEVGNTFKLGTKYAKALGLEYQDVNNKLHPVEMGCYGFGLERCMAAIVEQHNDASGI 459 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAPF+++++ + + D ++Y L K G DV DD E+ G +F +L+ Sbjct: 460 IWPTSVAPFEVAVVVVSSKDDEQMRIGNELYEALKKEGIDVLLDDRKERPGVKFKDMELI 519 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P ++ VG + + D VE + R D+SL E+++ Sbjct: 520 GIPYRITVG-RGIKDGNVEFRARTADESSDVSLHEIVD 556 >gi|183981901|ref|YP_001850192.1| prolyl-tRNA synthetase ProS [Mycobacterium marinum M] gi|183175227|gb|ACC40337.1| prolyl-tRNA synthetase ProS [Mycobacterium marinum M] Length = 582 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 137/223 (61%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I G+YSWLPLG + L N+ +IREE Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYIRPVGPGLYSWLPLGLRVLRNIERVIREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTEYGDGVFRLQDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ+K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YNSYKDFPLTLYQIQIKYRDEARPRAGILRAREFVMKDSYSFDIDSGGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF RL ++ + + A SG +GG S EF+ + GE T V C Sbjct: 184 QRIFDRLRVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRC 226 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/155 (39%), Positives = 86/155 (55%), Gaps = 2/155 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V ARGIE+GHIF G KY+ +A G DGK + MGSYGIG R+VA + E HD Sbjct: 416 VMARGIEIGHIFQLGRKYTDAFTADVLGEDGKPVRLTMGSYGIGVSRLVAVIAEQHHDNL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP +APF + L+ I D R + + L +G +V DD G +F A+ Sbjct: 476 GLRWPAEIAPFGVHLV-IANKDAEARAGAIGLASELDGLGVEVLLDDRQASPGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LLG P V+VG + +D VE++ R G ++++ Sbjct: 535 LLGMPWVVVVGRGW-ADGVVELRDRFGGQTRELTV 568 >gi|13882685|gb|AAK47237.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] Length = 578 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 94/215 (43%), Positives = 135/215 (62%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ FL L+++P DAE+ASHKL++R G I + G+YSWLPLG + L N+ +IR+E N Sbjct: 2 SELFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRNIERVIRDEMNA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 62 IGGQEILFPALLPRAPYETTNRWTQYGDSVFRLKDRRGNDYLLGPTHEELFTLTVKGEYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++ P T YQIQ K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y+ +Y R Sbjct: 122 SYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAYQR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RL ++ + + A SG +GG S EF+ + +GE Sbjct: 182 IFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGE 216 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 86/148 (58%), Gaps = 2/148 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V ARGIE+GHIF G+KY+ +A G DGK + MGSYGIG R+VA V E HD Sbjct: 412 VMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDEL 471 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP +VAPF + L+ I D R + A L ++G +V DD G +F A+ Sbjct: 472 GLRWPSTVAPFDVHLV-IANKDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAE 530 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 LLG P V+VG + +D VE++ R +G Sbjct: 531 LLGMPWIVVVGRGW-ADGVVELRDRFSG 557 >gi|145224625|ref|YP_001135303.1| prolyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] gi|145217111|gb|ABP46515.1| prolyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] Length = 588 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 101/250 (40%), Positives = 147/250 (58%), Gaps = 1/250 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G + G+YSWLPLG K L + I+R E Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYVRPVGPGLYSWLPLGLKVLRKIEHIVRSEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L + + R+ YG + RL DR D + GPTHEE+ T + Sbjct: 64 DAIGGQEILFPALLPRAPYETTNRWTEYGDTLFRLQDRRDNDYLLGPTHEEMFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFD+ +G K++Y+ +Y Sbjct: 124 YSSYKDFPLRLYQIQNKYRDEARPRAGILRGREFLMKDSYSFDVDDDGLKNAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDFD 240 RIF RL ++ + + A SG +GG S EF+ ++ GE T V C++ + + T Sbjct: 184 QRIFDRLKVRYVIVSAVSGAMGGSASEEFLAESEVGEDTFVRCAQSGYAANVEAVVTTAP 243 Query: 241 DIISLNSIVE 250 D I L+ + E Sbjct: 244 DPIPLDGLPE 253 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/155 (39%), Positives = 89/155 (57%), Gaps = 2/155 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V+ARGIE+GH+F G KY+ +A G +GK + MGSYGIG R+VA + E HD Sbjct: 420 VAARGIEIGHVFQLGRKYADAFNADVLGENGKPVRLTMGSYGIGVSRLVAVIAEQHHDEL 479 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP SVAPF + ++ I D R ++ L + G DV DD G +F A+ Sbjct: 480 GLRWPGSVAPFAVHVV-IANKDAEARAGATELATALDRAGADVLLDDRTASPGVKFKDAE 538 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LLG P V+VG + +D VE++ R +G + ++ + Sbjct: 539 LLGVPWIVVVGRGW-ADGVVELRDRFSGEKREIPV 572 >gi|118617676|ref|YP_906008.1| prolyl-tRNA synthetase [Mycobacterium ulcerans Agy99] gi|152112934|sp|A0PQB8|SYP_MYCUA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118569786|gb|ABL04537.1| prolyl-tRNA synthetase ProS [Mycobacterium ulcerans Agy99] Length = 582 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 137/223 (61%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I G+YSWLPLG + L N+ +IREE Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYIRPVGPGLYSWLPLGLRVLRNIERVIREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTEYGDGVFRLEDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ+K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YNSYKDFPLTLYQIQIKYRDEARPRAGILRAREFVMKDSYSFDIDSGGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF RL ++ + + A SG +GG S EF+ + GE T V C Sbjct: 184 QRIFDRLRVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRC 226 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/155 (39%), Positives = 85/155 (54%), Gaps = 2/155 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V ARGIE+GHIF G KY+ +A G DGK + MGSYGIG R+VA + E HD Sbjct: 416 VMARGIEIGHIFQLGRKYTDAFTADVLGEDGKPVRLTMGSYGIGVSRLVAVIAEQHHDNL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP +APF + L+ I D R + L +G +V DD G +F A+ Sbjct: 476 GLRWPAEIAPFGVHLV-IANKDAEARAGAIGLAGELDGLGVEVLLDDRQASPGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LLG P V+VG + +D VE++ R G ++++ Sbjct: 535 LLGMPWVVVVGRGW-ADGVVELRDRFGGQTRELTV 568 >gi|300858703|ref|YP_003783686.1| prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] gi|300686157|gb|ADK29079.1| Prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] Length = 585 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 93/217 (42%), Positives = 134/217 (61%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R I + + G+Y+WLPLG + L + I+REE Sbjct: 4 RLSALFLRTLREDPADAEVPSHKLLVRARYIRRAAPGVYTWLPLGLRTLKKIENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DGIGAQELLFPALLPREPYQATNRWTEYGDSLFRLKDRKGADYLLGPTHEEMFAGAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T +G + SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMTDDGLESSYQRHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RI RLG++ A SG +GG S EF+ +++ GE Sbjct: 184 QRILDRLGVEYAICSATSGAMGGSASEEFLAISENGE 220 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 59/156 (37%), Positives = 84/156 (53%), Gaps = 5/156 (3%) Query: 269 DSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D PE + ARGIEVGHIF G KY+ +GK MGSYGIG R++A Sbjct: 410 DPAPEGQGTLTLARGIEVGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGIGVSRLMA 469 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + E HD KG+ WP VAPF + ++ + D +A + + + L G +V +DD + Sbjct: 470 VLAEQRHDEKGLNWPIEVAPFAVHVV-VANKDTAAIEAGDALVSELDAAGVEVLFDDRPK 528 Query: 387 -QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +F A+LLG P V++G F + KVE++ R Sbjct: 529 VSPGVKFKDAELLGMPYVVVLGRSF-KEGKVELRVR 563 >gi|123965807|ref|YP_001010888.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] gi|152112942|sp|A2BVH0|SYP_PROM5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|123200173|gb|ABM71781.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] Length = 600 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 102/226 (45%), Positives = 139/226 (61%), Gaps = 4/226 (1%) Query: 1 MRRSKYF-LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 MR + F L L++ P +AEI SH+L+L+ G I + + GIY+++P+ K ++ ++ II + Sbjct: 1 MRVTTSFPLGTLRDTPSEAEIISHQLLLKGGYIRRVNSGIYAYMPIMLKVIEKISNIIEK 60 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTD 116 E N G ++ +P L A+LW S R++ Y M L DR K PTHEEV+T+ Sbjct: 61 ELNNNGCSKLLLPQLHPAELWKRSERWEGYTAGEGIMFNLKDRQGKEFGLAPTHEEVITN 120 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 I I SY+ LP FYQIQ KFRDE+RPRFG+MRSREF+MKD YSF + E Y K Sbjct: 121 IASEIINSYKQLPLCFYQIQTKFRDEIRPRFGLMRSREFIMKDGYSFHSSKEDLSSFYEK 180 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 M SY IF GL ++ + A+SG IGG S EF+V AD GE + Sbjct: 181 MERSYENIFKNCGLDTVGVDADSGAIGGAASKEFMVTADAGEDYIL 226 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/151 (41%), Positives = 82/151 (54%), Gaps = 3/151 (1%) Query: 260 SDVHNEKLFD--SLPENKRV-SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 SD+ N K D SL N+ + RGIE+GHIF G KYS ++A F DGK + MG Sbjct: 408 SDIRNAKKGDRISLESNEELKEKRGIEIGHIFQLGQKYSEKLNAKFSDKDGKLKNLWMGC 467 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+ A IE +HD GI WP ++PF+I +I D E+IY Sbjct: 468 YGIGVTRIAQAAIEQNHDENGISWPIQISPFEILIIPTNLKDPYQTKLTEEIYKEFESKK 527 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 DV DD + G +F ADL+G P Q+I+G Sbjct: 528 IDVLLDDRDVRAGVKFKDADLIGIPFQIIIG 558 >gi|319759028|gb|ADV70970.1| prolyl-tRNA synthetase [Streptococcus suis JS14] Length = 615 Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 93/207 (44%), Positives = 130/207 (62%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +P L+E P DA + SH LMLR G + Q S GIYS+LPL + ++ I+REE ++ A Sbjct: 2 IIPTLREMPSDASVISHALMLRAGYVRQISAGIYSYLPLANRVIEKAKNIMREEFDKIDA 61 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 IE P L SAD+W ESGRY++YG ++ +L +R I GPTHEE +T + R ++SY+ Sbjct: 62 IEFLAPALLSADIWRESGRYETYGDDLYKLKNREGSDFILGPTHEETVTLLARDAVQSYK 121 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP YQIQ K+RDE RPR G++R REF+MKD YSF + E +Y+ +Y IF Sbjct: 122 QLPLNIYQIQPKYRDEKRPRNGLLRGREFIMKDGYSFHASYESLDQTYDDYKAAYEAIFT 181 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVL 213 R GL+ + + G +GG S EF+ + Sbjct: 182 RAGLEFKAIIGDGGAMGGKDSQEFMAI 208 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 436 ARGIEIGHIFKLGTRYSDSMNANILDENGRSMPIIMGCYGIGVSRLLSAVLEQHARLFVN 495 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + + I A L G +V DD Sbjct: 496 KTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRN 555 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P++V VG K +D VE+K + TG Sbjct: 556 ERVGVKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKGTG 593 >gi|123968100|ref|YP_001008958.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] gi|152112943|sp|A2BPZ0|SYP_PROMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|123198210|gb|ABM69851.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] Length = 600 Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 101/229 (44%), Positives = 142/229 (62%), Gaps = 4/229 (1%) Query: 1 MRRSKYF-LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 MR + F L L++ P +AEI SH+L+L+ G I + + GIY+++PL + ++ ++AII + Sbjct: 1 MRVTTSFPLGTLRDTPSEAEIISHQLLLKAGYIRRVNSGIYAYMPLMLRVIEKISAIIEK 60 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTD 116 E N G ++ +P L ADLW +S R++ Y M L DR K PTHEEV+T Sbjct: 61 ELNSIGCTKLLLPQLHPADLWKKSERWEGYTAGEGIMFNLKDRQGKEFGLAPTHEEVITS 120 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 I I SY+ LP FYQIQ KFRDE+RPRFG+MRSREF+MKD YSF + Y K Sbjct: 121 IASETINSYKQLPQCFYQIQTKFRDEIRPRFGLMRSREFIMKDGYSFHSSQNDLASFYEK 180 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 + +Y IF GL+++ + A+SG IGG S EF+V AD GE + ++ Sbjct: 181 VSNAYENIFKSCGLQTVGVEADSGAIGGASSKEFMVTADAGEDSILFTQ 229 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%) Query: 261 DVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N K D + + + +GIE+GHIF G KYS ++A F DG+ + MG Y Sbjct: 409 DIRNAKKGDKISVYDDEELKEKKGIEIGHIFQLGQKYSEKLNAKFSDKDGQLKNLWMGCY 468 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+ A IE +HD KGI WP ++PF++ +I D + D E+IY+ Sbjct: 469 GIGVTRIAQAAIEQNHDQKGICWPIHISPFEVIIIPTNLKDPIQSDLTEQIYSNFLINKI 528 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DV DD ++ G +F A+L+G P Q+I+G + + +VE+ R + +S ++++ Sbjct: 529 DVLLDDRNDRAGVKFKDAELIGIPFQIIIGRDSI-NKEVELLCRTNNTKLKISTDKLL 585 >gi|291059576|gb|ADD72311.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Chicago] Length = 619 Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 97/252 (38%), Positives = 143/252 (56%), Gaps = 11/252 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S +F P L+ P DA IASH+L++R G + + + G++++LPLG + + AIIREE Sbjct: 1 MKMSAFFAPTLRSAPADATIASHQLLMRAGYVRKIANGLFAYLPLGLRVRHKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +E + P + A+LW ESGR+ G E+LR +R D +++ PT EE T + R Sbjct: 61 LEAIGCLECTAPVVTPAELWKESGRWYRMGAELLRAKNRLDHELLFSPTAEESFTALVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P + YQI K+RDE+RPR+G+MR+REF M DAYSF +Y K + Sbjct: 121 DCTSYKHFPLSLYQINAKYRDEIRPRYGLMRAREFTMADAYSFHTDCACLARTYEKFAHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF----------CSKDFMDF 230 Y IF R+GL I + A G +GG S EF+V + G+ + C K Sbjct: 181 YRAIFRRIGLSVIAVHAHLGAMGGQESEEFMVESAVGDNTLLLCPHCTYAANCEKAVGQR 240 Query: 231 PIP-SENTDFDD 241 P+P + +T D Sbjct: 241 PLPDTHDTHLKD 252 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 85/142 (59%), Gaps = 3/142 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +G E+GH+F G KY+ M TF G + MG YGIG R +A+V+E+ HD +GI Sbjct: 451 KGNELGHLFKLGDKYTRSMHLTFTDEQGVRQFPLMGCYGIGLDRTLASVVENHHDTRGIS 510 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP +++P+ + LI I H Q A E +Y +L G +V +DD E+ G +FA ADL+G Sbjct: 511 WPLAISPYAVVLIPIP-HTQAPYAAAEALYVQLRTRGVEVLFDDRAERPGVKFADADLIG 569 Query: 400 FPLQVIVGSKFVSDSKVEIKHR 421 PL+V++ +K + +VE R Sbjct: 570 IPLRVVLSAKTL--PRVECTTR 589 >gi|330833575|ref|YP_004402400.1| prolyl-tRNA synthetase [Streptococcus suis ST3] gi|329307798|gb|AEB82214.1| prolyl-tRNA synthetase [Streptococcus suis ST3] Length = 615 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 93/207 (44%), Positives = 130/207 (62%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +P L+E P DA + SH LMLR G + Q S GIYS+LPL + ++ I+REE ++ A Sbjct: 2 IIPTLREMPSDASVISHALMLRAGYVRQISAGIYSYLPLANRVIEKAKNIMREEFDKIDA 61 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 IE P L SAD+W ESGRY++YG ++ +L +R I GPTHEE +T + R ++SY+ Sbjct: 62 IEFLAPALLSADIWRESGRYETYGDDLYKLKNREGSDFILGPTHEETVTLLARDAVQSYK 121 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP YQIQ K+RDE RPR G++R REF+MKD YSF + E +Y+ +Y IF Sbjct: 122 QLPLNIYQIQSKYRDEKRPRNGLLRGREFIMKDGYSFHASYESLDQTYDDYKAAYEAIFT 181 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVL 213 R GL+ + + G +GG S EF+ + Sbjct: 182 RAGLEFKAIIGDGGAMGGKDSQEFMAI 208 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M+A +G+ + MG YGIG R+++AV+E Sbjct: 436 ARGIEIGHIFKLGTRYSDSMNANILDENGRSMPIIMGCYGIGVSRLLSAVLEQHARLFVN 495 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G+ GI +P +APF + LI + D+ + + I A L G +V DD Sbjct: 496 KTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRN 555 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G +F+ +DL+G P++V VG K +D VE+K + TG Sbjct: 556 ERVGVKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKGTG 593 >gi|183602502|ref|ZP_02963867.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219683545|ref|YP_002469928.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|254782886|sp|B8DTM3|SYP_BIFA0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|183218143|gb|EDT88789.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219621195|gb|ACL29352.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] Length = 599 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 96/215 (44%), Positives = 135/215 (62%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG L+ + +IREE N Sbjct: 2 STLFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLAVLNKIEDVIREEING 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 62 IGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDMYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y R Sbjct: 122 SYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTVDEEGMRQAYMDERGAYER 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 IF RL LK +P+ A SGP+GG S EF+ GE Sbjct: 182 IFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGE 216 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 88/156 (56%), Gaps = 2/156 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ HD KG+ Sbjct: 432 RGVEIGQVFQLGLKYSEALDLKVLNQNGKTVPVWMGCYGIGVSRVLACIAETHHDDKGLA 491 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP ++AP ++ ++ D+ +A E++ LS G +V +DD + G +F A+L+ Sbjct: 492 WPMNIAPAQVHVM-ATGKDEAAFEAAERLVDELSANGIEVLYDDRRKVSPGVKFKDAELI 550 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+ + G V++ +E++ R E++S++ V Sbjct: 551 GVPIIAVAGRDTVNNGTIEVRDRDGSNSENISVDSV 586 >gi|126695873|ref|YP_001090759.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] gi|166980139|sp|A3PBN3|SYP_PROM0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|126542916|gb|ABO17158.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] Length = 600 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 101/229 (44%), Positives = 142/229 (62%), Gaps = 4/229 (1%) Query: 1 MRRSKYF-LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 MR + F L L++ P +AEI SH+L+L+ G I + + GIY+++PL + ++ ++AII + Sbjct: 1 MRVTTSFPLGTLRDTPSEAEIISHQLLLKAGYIRRVNSGIYAYMPLMLRVVEKISAIIEK 60 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTD 116 E N G ++ +P L ADLW +S R++ Y M L DR K PTHEEV+T Sbjct: 61 ELNSIGCTKLLLPQLHPADLWKKSERWEGYTAGEGIMFNLKDRQGKEFGLAPTHEEVITS 120 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 I I SY+ LP FYQIQ KFRDE+RPRFG+MRSREF+MKD YSF + Y K Sbjct: 121 IASETINSYKQLPQCFYQIQTKFRDEIRPRFGLMRSREFIMKDGYSFHSSENDLASFYEK 180 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 + +Y IF GL+++ + A+SG IGG S EF+V AD GE + ++ Sbjct: 181 VGNAYENIFESCGLQTVGVDADSGAIGGASSKEFMVTADAGEDSILFTQ 229 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 97/178 (54%), Gaps = 4/178 (2%) Query: 261 DVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N K D + + + +GIE+GHIF G KYS ++A F DG+ + MG Y Sbjct: 409 DIRNAKKGDKISIDDDEELKEKKGIEIGHIFQLGQKYSEKLNAKFSDKDGQLKNLWMGCY 468 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+ A IE +HD KGI WP ++PF++ +I D + D E+IY Sbjct: 469 GIGVTRIAQAAIEQNHDQKGICWPIQISPFEVIIIPTNLKDPIQSDLTEQIYNNFLINKI 528 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DV DD ++ G +F A+L+G P QVI+G + + +VE+ R + +S ++++ Sbjct: 529 DVLLDDRNDRAGVKFKDAELIGIPFQVIIGRDSI-NKEVELFCRTNNTKIKISTDKLL 585 >gi|157412925|ref|YP_001483791.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] gi|166980140|sp|A8G3M4|SYP_PROM2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157387500|gb|ABV50205.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] Length = 600 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 101/229 (44%), Positives = 142/229 (62%), Gaps = 4/229 (1%) Query: 1 MRRSKYF-LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 MR + F L L++ P +AEI SH+L+L+ G I + + GIY+++P+ + ++ ++AII Sbjct: 1 MRVTTSFPLGTLRDTPSEAEIISHQLLLQAGYIRRVNSGIYAYMPIMLRVIEKISAIIER 60 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTD 116 E N G ++ +P L ADLW +S R++ Y M L DR K PTHEEV+T Sbjct: 61 ELNSIGCTKLLLPQLHPADLWRKSERWEGYTAGEGIMFNLKDRQGKEFGLAPTHEEVITS 120 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 I I SY+ LP FYQIQ KFRDE+RPRFG+MRSREF+MKD YSF + + Y K Sbjct: 121 IASETINSYKQLPQCFYQIQTKFRDEIRPRFGLMRSREFIMKDGYSFHSSEKDLASFYEK 180 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 + +Y IF GL+++ + A+SG IGG S EF+V AD GE + +K Sbjct: 181 VGNAYENIFKSCGLETVGVEADSGAIGGASSKEFMVTADAGEDSILFTK 229 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 96/178 (53%), Gaps = 4/178 (2%) Query: 261 DVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N K D + + + +GIE+GHIF G KYS ++A F DG + MG Y Sbjct: 409 DIRNAKKGDKISIANDEELKEKKGIEIGHIFQLGQKYSEKLNAKFSDKDGTLKNLWMGCY 468 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+ A IE +HD KGI WP ++PF++ +I D + + E+IY Sbjct: 469 GIGVTRIAQAAIEQNHDQKGICWPIQISPFEVIIIPTNLKDPIQSELTEQIYNNFLINKI 528 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DV DD ++ G +F A+L+G P Q+I+G V + +VE+ R + +S ++++ Sbjct: 529 DVLLDDRNDRAGVKFKDAELIGIPFQIIIGRDSV-NKEVELLSRTNNTKFKISTDKLL 585 >gi|88855365|ref|ZP_01130029.1| prolyl-tRNA synthetase [marine actinobacterium PHSC20C1] gi|88815272|gb|EAR25130.1| prolyl-tRNA synthetase [marine actinobacterium PHSC20C1] Length = 593 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 98/217 (45%), Positives = 137/217 (63%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+E+P DAE+ASH+L++R G I + + G+++WLPLG K + AIIREE Sbjct: 4 RLSQLFVRTLREDPVDAEVASHRLLVRAGYIRRQAPGVFAWLPLGLKVRRKIEAIIREEL 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+ P L + + +GR+ YG + RL DR D + PTHEEV T + + Sbjct: 64 ESFGAQEVLFPALLPREPYELTGRWTEYGDGIFRLKDRKDADYLLAPTHEEVFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQIQ K+RDE RPR G++R REF MKD+YSFD T G SY + +Y Sbjct: 124 YSSYKDLPLSLYQIQDKYRDEARPRAGLLRGREFSMKDSYSFDYTDAGLDLSYQQHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RLGL+ + + A++G +GG S EF+ GE Sbjct: 184 ERIFTRLGLEYVVVSADAGAMGGSKSEEFLHPTPIGE 220 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 101/180 (56%), Gaps = 5/180 (2%) Query: 258 ATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T +V + + D P+ +ARG+E+GH+F G KY+ + +GK V MG Sbjct: 410 GTVEVSDVRAGDPAPDGSGPIETARGMEIGHVFQLGRKYAEVLGLKVLDENGKLVTVTMG 469 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R++AA+ E+++DGKG++WP +++PF + ++ D V + E + L Sbjct: 470 SYGIGVTRLMAAIAETTNDGKGLLWPKNISPFDVHIVA-AGKDAVVFETAESLVTTLESA 528 Query: 376 GCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD + G +F A+LLG P VIVG + ++ VE+ R+T R ++ +V Sbjct: 529 GLDVLFDDRVKVSPGVKFGDAELLGVPKIVIVG-RDAANGMVEVWDRVTNERTSTAIADV 587 >gi|312139298|ref|YP_004006634.1| prolyl-tRNA ligase pros [Rhodococcus equi 103S] gi|311888637|emb|CBH47949.1| prolyl-tRNA ligase ProS [Rhodococcus equi 103S] Length = 581 Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 111/267 (41%), Positives = 155/267 (58%), Gaps = 18/267 (6%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ASHKL++R G + + + G+YSWLPLG + L V ++REE Sbjct: 4 RMSHLFLRTLRDDPADAEVASHKLLVRAGYVRRIAPGVYSWLPLGLRVLREVERVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ +P L D + S R+ YG + RL DR M+ GPTHEE+ + Sbjct: 64 NAMGAQEILLPALLPRDPYETSNRWTEYGAGLFRLKDRKGNDMMLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQ+Q K+RDE RPR G++R REF+MKD+YSFDLT EG SY +Y Sbjct: 124 YNSYKDFPVTLYQVQTKYRDEERPRAGILRGREFVMKDSYSFDLTDEGLTASYQAHRDTY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC-----------SKDFMD 229 RI RLG+K + + A SG +GG S EF+ ++ GE T V C K Sbjct: 184 ERILARLGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRCLESGYAANVEAVKTLAP 243 Query: 230 FPI------PSENTDFDDIISLNSIVE 250 P+ P+E D D +++++VE Sbjct: 244 APVPFDGLPPAEVRDTPDTETIDTLVE 270 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 93/164 (56%), Gaps = 6/164 (3%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V+ARGIEVGH+F G KY+ G +GK MGSYGIG R+VA + E HD K Sbjct: 416 VAARGIEVGHVFQLGRKYTDVFGVDVLGENGKPVRPTMGSYGIGVSRLVAVIAEQHHDDK 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP V+PF + L+ I D R+ E + A L K DV +DD G +F ++ Sbjct: 476 GLRWPSEVSPFDVHLV-IANKDDAAREGAEALAAELDKARVDVLFDDRKASPGVKFKDSE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEVIN 436 L+G PL V+VG F ++ VE++ R TG + D +L+E++ Sbjct: 535 LIGVPLVVVVGRGF-AEGNVELRDRFTGESREVPVDAALDEILT 577 >gi|325673396|ref|ZP_08153087.1| proline--tRNA ligase [Rhodococcus equi ATCC 33707] gi|325555417|gb|EGD25088.1| proline--tRNA ligase [Rhodococcus equi ATCC 33707] Length = 581 Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 111/267 (41%), Positives = 155/267 (58%), Gaps = 18/267 (6%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ASHKL++R G + + + G+YSWLPLG + L V ++REE Sbjct: 4 RMSHLFLRTLRDDPADAEVASHKLLVRAGYVRRIAPGVYSWLPLGLRVLREVERVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ +P L D + S R+ YG + RL DR M+ GPTHEE+ + Sbjct: 64 NAMGAQEILLPALLPRDPYETSNRWTEYGAGLFRLKDRKGNDMMLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQ+Q K+RDE RPR G++R REF+MKD+YSFDLT EG SY +Y Sbjct: 124 YNSYKDFPVTLYQVQTKYRDEERPRAGILRGREFVMKDSYSFDLTDEGLTASYQAHRDTY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC-----------SKDFMD 229 RI RLG+K + + A SG +GG S EF+ ++ GE T V C K Sbjct: 184 ERILARLGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRCLESGYAANVEAVKTLAP 243 Query: 230 FPI------PSENTDFDDIISLNSIVE 250 P+ P+E D D +++++VE Sbjct: 244 APVPFDGLPPAEVRDTPDTETIDTLVE 270 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 93/164 (56%), Gaps = 6/164 (3%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V+ARGIEVGH+F G KY+ G +GK MGSYGIG R+VA + E HD K Sbjct: 416 VAARGIEVGHVFQLGRKYTDVFGVDVLGENGKPVRPTMGSYGIGVSRLVAVIAEQHHDDK 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP V+PF + L+ I D R+ E + A L K DV +DD G +F ++ Sbjct: 476 GLRWPSEVSPFDVHLV-IANKDDAAREGAEALAAELDKARVDVLFDDRKASPGVKFKDSE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEVIN 436 L+G PL V+VG F ++ VE++ R TG + D +L+E++ Sbjct: 535 LIGVPLVVVVGRGF-AEGNVELRDRFTGESREVPVDAALDEILT 577 >gi|152965404|ref|YP_001361188.1| prolyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] gi|189083501|sp|A6W7Y5|SYP_KINRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|151359921|gb|ABS02924.1| prolyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] Length = 586 Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 96/218 (44%), Positives = 135/218 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S FL L+E+P +AE+ASHKL++R G + + + GIY+WLPLG K L V ++REE Sbjct: 3 MRMSTLFLRTLREDPVEAEVASHKLLVRAGYVRRAAPGIYTWLPLGLKVLRKVEQVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ P L + + + R+ YG + +L DR + PTHEE+ T + + Sbjct: 63 MDAAGAQEVHFPALLPREPYEATNRWSDYGDGIFKLKDRKGADYLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQIQ K+RDE RPR G++R REF MKD+YSFD+ G + SY + Sbjct: 123 LYSSYKDLPLSIYQIQTKYRDEARPRAGIIRGREFTMKDSYSFDVDDAGLERSYELHRQA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y+RIF RLGL + + A SG +GG S EF+ GE Sbjct: 183 YVRIFERLGLDFVIVSAVSGAMGGSRSEEFLHPTAIGE 220 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 92/159 (57%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+ HIF G +++ + +GK V MGSYG+G R +A V E +HD KG+ Sbjct: 422 ARGIEIAHIFALGRRFAQALDLKVLDENGKQVVVTMGSYGVGVTRALACVAEGNHDEKGL 481 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 +WP ++AP + ++ ++ A E++ L G +V +DD + G +F A+L Sbjct: 482 VWPRALAPADVHVVATGKDPEIFATA-ERLAGELVAQGLEVLYDDRPKVSPGVKFKDAEL 540 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +G P ++VG K +++ VE+K R +G E ++L++ ++ Sbjct: 541 IGVPTILVVG-KGLAEGLVELKDRRSGDSEQVALDDAVS 578 >gi|226306102|ref|YP_002766062.1| prolyl-tRNA synthetase [Rhodococcus erythropolis PR4] gi|259511615|sp|C0ZY88|SYP_RHOE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226185219|dbj|BAH33323.1| prolyl-tRNA synthetase [Rhodococcus erythropolis PR4] Length = 581 Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 110/271 (40%), Positives = 154/271 (56%), Gaps = 7/271 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ASHKL++R G + + + G+YSWLPLG + L V ++REE Sbjct: 4 RLSHLFLRTLRDDPSDAEVASHKLLVRAGYVRRIAPGVYSWLPLGLRVLREVERVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ +P L D + S R+ YG + RL DR + GPTHEE+ + Sbjct: 64 NAIGGQEILLPALLPRDPYEASNRWTEYGPNLFRLKDRKGNDYMLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQ+Q K+RDE RPR G++R REFLMKD+YSFDL+ EG SY +Y Sbjct: 124 YNSYKDFPVTLYQVQTKYRDEERPRAGILRGREFLMKDSYSFDLSDEGLTESYQAHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDFD 240 +IF RLG+K + + A SG +GG S EF+ ++ GE T V C + + + T Sbjct: 184 EKIFTRLGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRCLESGYAANVEAVKTVVP 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D I + + P A D N D+L Sbjct: 244 DSIPFDGL------PEAKVYDTANTPTIDTL 268 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 95/164 (57%), Gaps = 6/164 (3%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 VSARGIE+GH+F G KY+ + +GK MGSYG+G R+VA + E HD K Sbjct: 416 VSARGIEIGHVFQLGRKYTDVFTVDVLAENGKPVRPTMGSYGVGVSRLVAVIAEQHHDEK 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP V+P + L+ I D+ R+ E + A+L + G +V DD G +F ++ Sbjct: 476 GLRWPAEVSPADVYLV-IANKDETAREGAEGLAAQLDRAGLEVILDDRKASPGVKFKDSE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEVIN 436 L+G PL V+VG + +D KVEI+ R TG I D ++E +I+ Sbjct: 535 LIGVPLIVVVGRGW-ADGKVEIRDRFTGESREIDADSAIEAIIS 577 >gi|315444957|ref|YP_004077836.1| prolyl-tRNA synthetase, family II [Mycobacterium sp. Spyr1] gi|315263260|gb|ADU00002.1| prolyl-tRNA synthetase, family II [Mycobacterium sp. Spyr1] Length = 584 Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 100/248 (40%), Positives = 146/248 (58%), Gaps = 1/248 (0%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+ FL L+++P DAE+ SHKL++R G + G+YSWLPLG K L + I+R E + Sbjct: 2 SELFLRTLRDDPADAEVPSHKLLIRAGYVRPVGPGLYSWLPLGLKVLRKIEHIVRSEMDA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L + + R+ YG + RL DR D + GPTHEE+ T + Sbjct: 62 IGGQEILFPALLPRAPYETTNRWTEYGDTLFRLQDRRDNDYLLGPTHEEMFTLTVKGEYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFD+ +G K++Y+ +Y R Sbjct: 122 SYKDFPLRLYQIQNKYRDEARPRAGILRGREFLMKDSYSFDVDDDGLKNAYHAHREAYQR 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDFDDI 242 IF RL ++ + + A SG +GG S EF+ ++ GE T V C++ + + T D Sbjct: 182 IFDRLKVRYVIVSAVSGAMGGSASEEFLAESEVGEDTFVRCAQSGYAANVEAVVTTAPDP 241 Query: 243 ISLNSIVE 250 I L+ + E Sbjct: 242 IPLDGLPE 249 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/155 (39%), Positives = 89/155 (57%), Gaps = 2/155 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V+ARGIE+GH+F G KY+ +A G +GK + MGSYGIG R+VA + E HD Sbjct: 416 VAARGIEIGHVFQLGRKYADAFNADVLGENGKPVRLTMGSYGIGVSRLVAVIAEQHHDEL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP SVAPF + ++ I D R ++ L + G DV DD G +F A+ Sbjct: 476 GLRWPGSVAPFAVHVV-IANKDAEARAGATELATALDRAGADVLLDDRTASPGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LLG P V+VG + +D VE++ R +G + ++ + Sbjct: 535 LLGVPWIVVVGRGW-ADGVVELRDRFSGEKREIPV 568 >gi|309775936|ref|ZP_07670928.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] gi|308916218|gb|EFP61966.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] Length = 564 Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 97/263 (36%), Positives = 148/263 (56%), Gaps = 10/263 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+EN +D + S L++R GMI + S GIY +P+G++ L + I+REE Sbjct: 1 MKLSNSYFYTLRENVKDEDSTSGNLLVRAGMIKKSSSGIYMIMPMGKRVLKKIEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + +++ +SGR +++G M L DR K + GPTHEE+ T Sbjct: 61 MDAAGAQELLMPAMIPEEIYEKSGRREAFGSNMFALKDRYQKNYVLGPTHEELFTMAAMM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P+ YQIQ KFRDE RPR+G++R REF+MKDAYSFD+ G SY KMF + Sbjct: 121 KGSSYKDFPYNLYQIQTKFRDETRPRYGLIRVREFIMKDAYSFDIDEAGLHESYKKMFHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I R L ++A++G +GG LS EF + + GE D + + DF Sbjct: 181 YENIMERCDLTYKIVKADTGAMGGSLSEEFQAITEIGE----------DVVVTCDGCDFS 230 Query: 241 DIISLNSIVEQWTAPYAATSDVH 263 + + +++ T A D+ Sbjct: 231 SNLEITEVIDTSTPSDAPMQDME 253 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 92/157 (58%), Gaps = 1/157 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVG+ F GTKY+ + ++ + K H V+MG YG G R +AA++E +D GI Sbjct: 400 CKGIEVGNTFKLGTKYAKALGLEYQDVNNKLHPVEMGCYGFGLERCMAAIVEQHNDASGI 459 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAPF+++++ + + D+ ++Y L K G DV DD E+ G +F +L+ Sbjct: 460 IWPASVAPFEVAVVVVSSKDEEQMRIGNELYEALKKEGVDVLLDDRKERPGVKFKDMELI 519 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P ++ VG + + D VE + R D++L EV+ Sbjct: 520 GIPYRITVG-RGIKDGNVEFRARTASESSDIALSEVV 555 >gi|33861065|ref|NP_892626.1| prolyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|81835597|sp|Q7V2H0|SYP_PROMP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33639797|emb|CAE18967.1| Prolyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 600 Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 116/310 (37%), Positives = 169/310 (54%), Gaps = 12/310 (3%) Query: 1 MRRSKYF-LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 MR + F L L++ P +AEI SH+L+L+ G I + + GIY+++P+ + ++ ++ II + Sbjct: 1 MRVTTSFPLGTLRDTPSEAEIISHQLLLKGGYIRRVNSGIYAYMPIMLRVIEKISTIIEK 60 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTD 116 E N ++ +P L A+LW +S R++ Y M L DR K PTHEEV+T Sbjct: 61 ELNNIYCSKLLLPQLHPAELWKKSERWEGYTAGEGIMFNLKDRQGKEFGLAPTHEEVITS 120 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 I I SY+ LP FYQIQ KFRDE+RPRFG+MRSREF+MKDAYSF + E Y K Sbjct: 121 IASEMINSYKQLPLCFYQIQTKFRDEIRPRFGLMRSREFIMKDAYSFHSSKEDLASFYEK 180 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 M +Y IF GL ++ + A+SG IGG S EF+V AD GE + ++ S Sbjct: 181 MEKAYENIFKNCGLDTVGVDADSGAIGGAASKEFMVTADAGEDSILFTES------GSYA 234 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY--FGTKY 294 + + +SL S + + N+K + +N + A I IF F K Sbjct: 235 ANIEKAVSLPSKEIPLIRSHEEWIETPNQKSIVDICQNNNLDASQIIKVVIFLAKFEDKS 294 Query: 295 SLPMSATFKG 304 +P+ A +G Sbjct: 295 EVPILACIRG 304 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 86/151 (56%), Gaps = 3/151 (1%) Query: 260 SDVHNEKLFDSLPE--NKRVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 SD+ N K D + + N+ + RGIE+GHIF G KYS ++A F +G+ + MG Sbjct: 408 SDIRNAKKGDCISQESNEELKEKRGIEIGHIFQLGQKYSEKLNAKFSDKNGQLKNLWMGC 467 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+ A IE +HD GI WP ++PF+I +I D + ++ ++IY Sbjct: 468 YGIGVTRIAQAAIEQNHDENGISWPIQISPFEILIIPTNLKDPIQKELTQEIYEEFISNQ 527 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 DV DD ++ G +F ADL+G P Q+I+G Sbjct: 528 IDVLLDDRDDRAGVKFKDADLIGIPFQIIIG 558 >gi|317508518|ref|ZP_07966185.1| prolyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] gi|316253209|gb|EFV12612.1| prolyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] Length = 606 Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 137/223 (61%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ +HKL++R G + S G+++WLPLG KAL + ++REE Sbjct: 4 RLSELFLRTLREDPADAEVPNHKLLVRGGYFRRVSPGVFAWLPLGLKALRQIENVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ +P L + S R+ YG + RL DR + PTHEE+ + + Sbjct: 64 DGIGGQEILLPALAPRQPYETSNRWTEYGDNLFRLKDRKGGDYLLAPTHEELFALLVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G+K +Y+ +Y Sbjct: 124 YTSYKDLPVILYQIQTKYRDEERPRAGILRGREFVMKDSYSFDVDEAGNKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF RLG+ + + A SG +GG S EF+ + GE T V C Sbjct: 184 QRIFDRLGISYVIVAATSGAMGGSASEEFLAESAIGEDTYVRC 226 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/151 (42%), Positives = 87/151 (57%), Gaps = 1/151 (0%) Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 K V+ARGIE+GH+F GTKY+ S G +GK + MGSYGIG R+V + E H Sbjct: 417 GKLVAARGIEIGHVFALGTKYTDAFSVDVLGENGKPARLIMGSYGIGVSRLVGVIAEQWH 476 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 D KG+ WP VAPF++ +++ +A E+ A L G V DD G +FA Sbjct: 477 DEKGLRWPPQVAPFQVHVLST-GKGSAEAEAAEQYAAELEAHGLRVLLDDRKASPGVKFA 535 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 A+LLG P+ V+VG + S+ KVE+K R G Sbjct: 536 DAELLGAPVIVVVGRDWASEGKVELKERFAG 566 >gi|254525440|ref|ZP_05137492.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] gi|221536864|gb|EEE39317.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] Length = 598 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 98/225 (43%), Positives = 140/225 (62%), Gaps = 3/225 (1%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + + L L++ P +AEI SH+L+L+ G I + + GIY+++P+ + ++ ++AII E N Sbjct: 3 TSFPLGTLRDTPSEAEIISHQLLLQAGYIRRVNSGIYAYMPIMLRVIEKISAIIERELNS 62 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G ++ +P L ADLW +S R++ Y M L DR K PTHEEV+T I Sbjct: 63 IGCTKLLLPQLHPADLWRKSERWEGYTAGEGIMFNLKDRQGKEFGLAPTHEEVITSIASE 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFG+MRSREF+MKD YSF + + Y K+ + Sbjct: 123 TINSYKQLPQCFYQIQTKFRDEIRPRFGLMRSREFIMKDGYSFHSSEKDLASFYEKVGNA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y IF GL+++ + A+SG IGG S EF+V AD GE + +K Sbjct: 183 YENIFKSCGLETVGVEADSGAIGGASSKEFMVTADAGEDSILFTK 227 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 97/178 (54%), Gaps = 4/178 (2%) Query: 261 DVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N K D + + + +GIE+GHIF G KYS ++A F DGK + MG Y Sbjct: 407 DIRNAKKGDKISIANDEELKEKKGIEIGHIFQLGQKYSEKLNAKFSDKDGKLKNLWMGCY 466 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+ A IE +HD KGI WP ++PF++ +I D + + E+IY Sbjct: 467 GIGVTRIAQAAIEQNHDQKGICWPIQISPFEVIIIPTNLKDPIQSELTEQIYNNFLINKI 526 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DV DD ++ G +F A+L+G P Q+I+G V + +VE+ R + +S ++++ Sbjct: 527 DVLLDDRNDRAGVKFKDAELIGIPFQIIIGRDSV-NKEVELLSRTNNTKFKISTDKLL 583 >gi|160915433|ref|ZP_02077644.1| hypothetical protein EUBDOL_01441 [Eubacterium dolichum DSM 3991] gi|158432553|gb|EDP10842.1| hypothetical protein EUBDOL_01441 [Eubacterium dolichum DSM 3991] Length = 553 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 96/241 (39%), Positives = 144/241 (59%), Gaps = 10/241 (4%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 ++EN +D + S L++R GMI + S GIY +P+G++ L + I+REE + GA E+ Sbjct: 1 MRENAKDEDSVSGNLLVRAGMIKKSSAGIYMIMPMGKRVLKKIEDIVREEMDAAGAQELL 60 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 +P L +++ SGR D++G M L DR K + GPTHEE+ T +SY++ P+ Sbjct: 61 MPALIPEEVYEISGRRDAFGSNMFALKDRYQKNYVLGPTHEELFTLAAMMKGRSYKDFPY 120 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 YQIQ KFRDE RPR+G++R+REF+MKDAYSFD+ E SY KMF +Y +IF R L Sbjct: 121 NLYQIQTKFRDETRPRYGLIRTREFIMKDAYSFDIDNEHLHESYMKMFDAYKKIFDRCDL 180 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 ++A++G +GG LS EF + D GE D + E+ F + + +V+ Sbjct: 181 NYKIVKADTGAMGGSLSEEFQAICDVGE----------DVVVTCEHCGFSSNLEITEVVD 230 Query: 251 Q 251 + Sbjct: 231 R 231 Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 1/165 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVG+ F G KY+ + + A+ H V+MG YG+G R +A+++E HD GI Sbjct: 390 CKGIEVGNTFKLGNKYAKALGLEYLDANNTLHPVEMGCYGLGLERTLASIVEQHHDDDGI 449 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAP++++++ + D+ ++Y L G DV DD E+ G +F +L+ Sbjct: 450 IWPLSVAPYQVAIVIVSMKDEEQVRIANELYETLKAEGYDVLLDDRKERPGVKFKDMELI 509 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P ++ VG + ++ VE++ R E++++E V+ Y ++ Sbjct: 510 GIPYRITVG-RGIAQGNVELRARGAHENEEVAIENVVTYLQNKLQ 553 >gi|331087039|ref|ZP_08336114.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330409489|gb|EGG88932.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 564 Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 100/251 (39%), Positives = 147/251 (58%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+EN ++ + S L++R GMI + S GIY +P+G++ L + I+REE Sbjct: 1 MKLSNSYFYTLRENVKEEDSTSGNLLVRAGMIKKSSSGIYMIMPMGKRVLKKIEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + +++ +SGR +++G M L DR K + GPTHEE+ T Sbjct: 61 MDAAGAQELLMPAMIPEEIYEKSGRREAFGSNMFALKDRYQKNYVLGPTHEELFTMAAMM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P+ YQIQ KFRDE RPR+G++R REF+MKDAYSFD+ G SY KMF + Sbjct: 121 KGSSYKDFPYNLYQIQTKFRDETRPRYGLIRVREFIMKDAYSFDIDEAGLHESYMKMFHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I R L ++A++G +GG LS EF + D GE V + D DF E T+ Sbjct: 181 YQNIMERCKLNYKIVKADTGAMGGSLSEEFQAITDIGE-DVIVTCDGCDFSSNLEITEVI 239 Query: 241 DIISLNSIVEQ 251 D+ + EQ Sbjct: 240 DVSEPSDAEEQ 250 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 93/165 (56%), Gaps = 1/165 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVG+ F GTKY+ + ++ D K H V+MG YG G R +AA++E +D GI Sbjct: 400 CKGIEVGNTFKLGTKYAKTLGLEYQDVDNKLHPVEMGCYGFGLERCMAAIVEQHNDEAGI 459 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAPF+++++ + + D+ ++Y L K G DV DD E+ G +F +L+ Sbjct: 460 IWPASVAPFEVAVVVVSSKDEEQMRIGSELYEALKKEGIDVLLDDRKERPGVKFKDMELI 519 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P ++ VG + + + KVE + R +++L EVI Sbjct: 520 GIPYRITVG-RGIQEGKVEFRARTAAENREIALGEVIKLVKEELQ 563 >gi|330791908|ref|XP_003284033.1| hypothetical protein DICPUDRAFT_74994 [Dictyostelium purpureum] gi|325086079|gb|EGC39475.1| hypothetical protein DICPUDRAFT_74994 [Dictyostelium purpureum] Length = 606 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 141/223 (63%), Gaps = 1/223 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 RSK F+P + I S LM + G+I + + G YS LP QKAL+N+ +I EE Sbjct: 45 RSKMFIPFQDQKMETDLIESQLLMQKGGLIRKLAVGSYSTLPFAQKALENLIKVIDEEME 104 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G +M++P + +LW ++GR+D++GK++++L DR + GPTHEEV+T I + Sbjct: 105 QVGGQKMTMPKMIPKELWDKTGRWDAFGKDLIKLKDRRENEYCMGPTHEEVVTSIVGNEK 164 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 + N P YQI KFRDE+RPRFG++R +EFLMKD YSFD+T E ++ +Y ++ +Y Sbjct: 165 LPFNNFPIKLYQIGEKFRDEIRPRFGLLRGKEFLMKDMYSFDVTKEDAEKTYYQVKQAYH 224 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCS 224 I RL L + A+SG IGG++SHEF V+ GE + + CS Sbjct: 225 NILDRLELPYACVEADSGNIGGNMSHEFQVVTKAGEDKLIHCS 267 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 22/181 (12%) Query: 280 RGIEVGHIFYFGTKYSLPMSAT-FKGADGKDHYVQMGSYGIGAMRVVAAVIES-SHDGK- 336 +GIEVGHIFY G KYS +AT K KD ++MG +GIG R++AA +E+ S GK Sbjct: 429 KGIEVGHIFYLGNKYSSSFNATSCKNNIVKD--LEMGCFGIGVSRLLAASVEALSKSGKE 486 Query: 337 --------GIIWPDSVAPFKISLINIKAHDQVCRDACE---KIYARLSKVGCDVFWDDMG 385 I +P + P+ I ++ K Q +DA E ++ ++ ++ + DD Sbjct: 487 IDGTVTKDKITFPKEITPYHIIIVPKKESLQ--KDAEEISQQLQQQIPELKGRIIIDDRH 544 Query: 386 E-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED---MSLEEVINYASHR 441 + +G + + LG P +++ + ++++ I+E+ ++ + ++Y ++ Sbjct: 545 DANVGHKIFESKFLGIPYLLVLNIDKSKQTNYKVEYDYGQIKEENNYLNQPDTLDYFKNK 604 Query: 442 F 442 F Sbjct: 605 F 605 >gi|170055177|ref|XP_001863466.1| prolyl-tRNA synthetase [Culex quinquefasciatus] gi|167875210|gb|EDS38593.1| prolyl-tRNA synthetase [Culex quinquefasciatus] Length = 315 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 114/321 (35%), Positives = 169/321 (52%), Gaps = 37/321 (11%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDN-VNAIIREEQNRTGAIEMSVPTLQSADLW 80 S +LML G+I Q G + +PL Q++L V+ + Q A ++++P L +A LW Sbjct: 13 SQRLMLEQGLIRQAGNGTFYLMPLLQRSLQKAVDLVDHFMQRHASAQKLTLPILTAASLW 72 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS-HIKSYRNLPFTFYQIQLKF 139 +SGR +S G E++R DR+ K I GPTHEE +T + S SYR P YQI KF Sbjct: 73 RQSGRLESAGPELMRTTDRHGKQQILGPTHEESITALVASISPVSYRAFPLRLYQISTKF 132 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE++PRFG+MR++EFLMKD Y+FD+ ++ +Y ++ +Y ++F +G+ + +R ++ Sbjct: 133 RDEMKPRFGLMRAKEFLMKDLYTFDVGRGEARETYEEVNEAYRKLFDAVGVGYVKVRGDT 192 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 G IGG SHE+ ++ GE Q+ C + W Sbjct: 193 GTIGGSESHEYHFPSEVGEDQLVCCGE---------------------CGMGW------- 224 Query: 260 SDVHNEKLFDSLPE--NKRVSAR-GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 N+++F VS + GIEV H F KYS M A F +GK +QMG Sbjct: 225 ----NQEMFGGCERCGGANVSRQAGIEVAHAFILDDKYSKTMGAKFLAQNGKPETLQMGC 280 Query: 317 YGIGAMRVVAAVIESSHDGKG 337 YGIG R++AA +E KG Sbjct: 281 YGIGVTRLLAAGVEVLSGEKG 301 >gi|15639153|ref|NP_218599.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Nichols] gi|189025393|ref|YP_001933165.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|6094411|sp|O83195|SYP_TREPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701353|sp|B2S2A7|SYP_TREPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|3322426|gb|AAC65149.1| prolyl-tRNA synthetase (proS) [Treponema pallidum subsp. pallidum str. Nichols] gi|189017968|gb|ACD70586.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] Length = 617 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 96/249 (38%), Positives = 141/249 (56%), Gaps = 11/249 (4%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S +F P L+ P DA IASH+L++R G + + + G++++LPLG + + AIIREE Sbjct: 2 SAFFAPTLRSAPADATIASHQLLMRAGYVRKIANGLFAYLPLGLRVRHKIEAIIREELEA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E + P + A+LW ESGR+ G E+LR +R D +++ PT EE T + R Sbjct: 62 IGCLECTAPVVTPAELWKESGRWYRMGAELLRAKNRLDHELLFSPTAEESFTALVRGDCT 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++ P + YQI K+RDE+RPR+G+MR+REF M DAYSF +Y K +Y Sbjct: 122 SYKHFPLSLYQINAKYRDEIRPRYGLMRAREFTMADAYSFHTDCACLARTYEKFAHAYRA 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF----------CSKDFMDFPIP 233 IF R+GL I + A G +GG S EF+V + G+ + C K P+P Sbjct: 182 IFRRIGLSVIAVHAHLGAMGGQESEEFMVESAVGDNTLLLCPHCTYAANCEKAVGQRPLP 241 Query: 234 -SENTDFDD 241 + +T D Sbjct: 242 DTHDTHLKD 250 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 85/142 (59%), Gaps = 3/142 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +G E+GH+F G KY+ M TF G + MG YGIG R +A+V+E+ HD +GI Sbjct: 449 KGNELGHLFKLGDKYTRSMHLTFTDEQGVRQFPLMGCYGIGLDRTLASVVENHHDTRGIS 508 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP +++P+ + LI I H Q A E +Y +L G +V +DD E+ G +FA ADL+G Sbjct: 509 WPLAISPYAVVLIPIP-HTQAPYAAAEALYVQLRTRGVEVLFDDRAERPGVKFADADLIG 567 Query: 400 FPLQVIVGSKFVSDSKVEIKHR 421 PL+V++ +K + +VE R Sbjct: 568 IPLRVVLSAKTL--PRVECTTR 587 >gi|325663512|ref|ZP_08151922.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|325470411|gb|EGC73642.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] Length = 564 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 98/243 (40%), Positives = 145/243 (59%), Gaps = 4/243 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+EN ++ + S L++R GMI + S GIY +P+G++ L + I+REE Sbjct: 1 MKLSNSYFYTLRENVKEEDSTSGNLLVRAGMIKKSSSGIYMIMPMGKRVLKKIEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + +++ +SGR +++G M L DR K + GPTHEE+ T Sbjct: 61 MDAAGAQELLMPAMIPEEIYEKSGRREAFGSNMFALKDRYQKNYVLGPTHEELFTMAAMM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P+ YQIQ KFRDE RPR+G++R REF+MKDAYSFD+ G SY KMF + Sbjct: 121 KGSSYKDFPYNLYQIQTKFRDETRPRYGLIRVREFIMKDAYSFDIDEAGLHESYMKMFHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I R L ++A++G +GG LS EF + D GE V + D DF S N + Sbjct: 181 YQNIMERCKLNYKIVKADTGAMGGSLSEEFQAITDIGE-DVIVTCDGCDF---SSNLEIT 236 Query: 241 DII 243 ++I Sbjct: 237 EVI 239 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 94/165 (56%), Gaps = 1/165 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVG+ F GTKY+ + ++ D K H V+MG YG G R +AA++E +D GI Sbjct: 400 CKGIEVGNTFKLGTKYAKTLGLEYQDVDNKLHPVEMGCYGFGLERCMAAIVEQHNDEAGI 459 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAPF+++++ + + D+ ++Y L K G DV DD E+ G +F +L+ Sbjct: 460 IWPASVAPFEVAVVVVSSKDEEQMRIGNELYEALKKEGIDVLLDDRKERPGVKFKDMELI 519 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P ++ VG + + + KVE + R +++L+EVI Sbjct: 520 GIPYRITVG-RGIQEGKVEFRARTAAENREIALDEVIKLVKEELQ 563 >gi|254819680|ref|ZP_05224681.1| prolyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950] Length = 583 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 135/223 (60%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ASHKL++R G I + G+YSWLPLG + L + I+REE Sbjct: 4 RMSQLFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRRIEGIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYEATNRWTEYGDSVFRLKDRRGSDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPVLLYQIQNKYRDEARPRAGILRVREFLMKDSYSFDVDDAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF RL ++ + + A SG +GG S EF+ + GE T V C Sbjct: 184 QRIFARLQVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRC 226 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 64/154 (41%), Positives = 87/154 (56%), Gaps = 2/154 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 VSARGIEV HIF G KY+ +A G DGK + MGSYG+G R+VA + E HD Sbjct: 416 VSARGIEVAHIFQLGRKYTDAFTADVLGEDGKPVRLTMGSYGLGVSRMVAVIAEQHHDEL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP SVAPF + L+ I D R ++ L ++G DV DD G +F A+ Sbjct: 476 GLRWPSSVAPFDVHLV-IANKDDRARTGATELAGELDRLGVDVLLDDRQASPGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 LLG P V+VG + +D VE++ R G +++ Sbjct: 535 LLGVPWIVVVGRGW-ADGVVELRDRFGGQTRELA 567 >gi|226366073|ref|YP_002783856.1| prolyl-tRNA synthetase [Rhodococcus opacus B4] gi|254782912|sp|C1B2Z4|SYP_RHOOB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226244563|dbj|BAH54911.1| prolyl-tRNA synthetase [Rhodococcus opacus B4] Length = 581 Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 141/223 (63%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ SHKL++R G + + + G+YSWLPLG + L V ++REE Sbjct: 4 RLSHLFLRTLRDDPADAEVPSHKLLVRAGYVRRIAPGVYSWLPLGLRVLREVERVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+S+P L + + S R+ YG+ + RL DR + GPTHEE+ + Sbjct: 64 NGIGAQEISLPALLPREPYEASNRWTEYGEGLFRLKDRKGGDYLLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQ+Q K+RDE RPR G++R REF+MKD+YSFDLT EG SY +Y Sbjct: 124 YNSYKDFPVTLYQVQTKYRDEERPRAGILRGREFVMKDSYSFDLTDEGLTESYRAHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF RLG+K + + A SG +GG S EF+ ++ GE T V C Sbjct: 184 ERIFARLGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRC 226 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 91/160 (56%), Gaps = 2/160 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V+ARGIE+GH+F G KY+ S G +GK MGSYG+G R+VA + E HD K Sbjct: 416 VAARGIEIGHVFQLGRKYTDVFSVDVLGENGKPVRPTMGSYGVGVSRLVAVIAEQHHDDK 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP V+P + ++ I D R+ E + A L K G +V DD G +F ++ Sbjct: 476 GLRWPAEVSPADVHVV-IANKDDTAREGAEGLAADLDKAGLEVILDDRKASPGVKFKDSE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 LLG PL V+VG + + KVE++ R TG +++ E ++ Sbjct: 535 LLGVPLVVVVGRGW-GEGKVEVRDRFTGESREVAAESALS 573 >gi|240172755|ref|ZP_04751414.1| prolyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478] Length = 582 Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 95/225 (42%), Positives = 136/225 (60%), Gaps = 1/225 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G + + G+YSWLPLG + L N+ ++REE Sbjct: 4 RMSQLFLRTLRDDPADAEVPSHKLLIRAGYVRPIAPGLYSWLPLGLRVLRNIERVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTEYGDSVFRLQDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YNSYKDFPLVLYQIQNKYRDEARPRAGILRVREFVMKDSYSFDIDSAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 RIF RL ++ + + A SG +GG S EF+ + GE T V C + Sbjct: 184 QRIFERLRVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCPE 228 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/154 (40%), Positives = 87/154 (56%), Gaps = 2/154 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V ARGIE+GHIF G KY+ SA G DGK + MGSYGIG R+VA V E HD Sbjct: 416 VMARGIEIGHIFQLGQKYTDAFSADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDEL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP ++APF + L+ I D R + L++ G +V DD G +F A+ Sbjct: 476 GLRWPPAIAPFDVHLV-IANKDAEARTGAVALATELNQQGVEVLLDDRQASPGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 LLG P V+VG + +D VE++ R +G +++ Sbjct: 535 LLGMPWIVVVGRGW-ADGVVELRDRFSGQTRELA 567 >gi|311897171|dbj|BAJ29579.1| putative prolyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 586 Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 104/221 (47%), Positives = 140/221 (63%), Gaps = 1/221 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P L+E+P DA+ ASH+L++R G + Q + G YS LPL + + A++REE Sbjct: 1 MRWSQLYVPTLREDPADADAASHRLLVRAGYVRQLAAGHYSLLPLAARVRARIVAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA E +P L A+LW +GR++S G+EM RL DR G THEEV + Sbjct: 61 MERIGAQEFLLPALHPAELWRRTGRWESMGEEMFRLTDRKGAEQALGMTHEEVFAHLA-E 119 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP T+YQ Q KFRDE RPR G++R REF MKD+YSFDL G S+ ++ Sbjct: 120 ELRSYRQLPQTWYQFQTKFRDEARPRSGLLRVREFTMKDSYSFDLDEAGMARSFEAHRLA 179 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 YLRIF RLGL + +RA SG +GG S EF+ + GE V Sbjct: 180 YLRIFERLGLPAFGVRASSGAMGGSGSVEFMSPSAAGEDLV 220 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 19/240 (7%) Query: 200 GPIGGDLSHEFIVLADT---GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 GP+GG H VLAD G T + C + F + + D ++ + + + TA Sbjct: 354 GPLGG---HGLPVLADEALRGRTGLTCGANRDGFHLRGVSIGRDVRVTRWADLREVTAGE 410 Query: 257 -AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A E L R IEVGHIF G +Y+ + G G+ MG Sbjct: 411 PCAECGAALEVL------------RTIEVGHIFQLGRRYTEALGVAVAGPAGERVVPLMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R++AA++E+ HD +GI WP +VAPF + L + +A E++ L Sbjct: 459 SYGIGVERLLAALVEAHHDERGIRWPAAVAPFDLVLTVLPDRGGAVAEAAERLCGELGAA 518 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD E+ G +FA A+L+G P ++ +G++ ++ E+ R G ++ L+ + Sbjct: 519 GVRVLLDDRAERPGVKFADAELIGVPWRLTLGARGLAAGTAELTARADGSTRELGLDAAV 578 >gi|111023587|ref|YP_706559.1| prolyl-tRNA synthetase [Rhodococcus jostii RHA1] gi|122955090|sp|Q0S235|SYP1_RHOSR RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|110823117|gb|ABG98401.1| proline--tRNA ligase [Rhodococcus jostii RHA1] Length = 581 Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 140/223 (62%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ SHKL++R G + + + G+YSWLPLG + L V ++REE Sbjct: 4 RLSHLFLRTLRDDPADAEVPSHKLLVRAGYVRRIAPGVYSWLPLGLRVLREVERVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+S+P L + + S R+ YG + RL DR + GPTHEE+ + Sbjct: 64 NGIGAQEISLPALLPREPYEASNRWTEYGDGLFRLKDRKGGDYLLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQ+Q K+RDE RPR G++R REF+MKD+YSFDLT EG SY +Y Sbjct: 124 YNSYKDFPVTLYQVQTKYRDEERPRAGILRGREFVMKDSYSFDLTDEGLTASYRAHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF RLG+K + + A SG +GG S EF+ ++ GE T V C Sbjct: 184 ERIFSRLGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRC 226 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 2/160 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V+ARGIE+GH+F G KY+ S G +GK MGSYG+G R+VA + E HD K Sbjct: 416 VAARGIEIGHVFQLGRKYTDVFSVDVLGENGKPVRPTMGSYGVGVSRLVAVIAEQHHDEK 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP V+P + ++ I D+ R+ E + A L K G +V DD G +F ++ Sbjct: 476 GLRWPAEVSPADVHVV-IANKDETAREGAEGLAAELDKAGLEVILDDRKASPGVKFKDSE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 LLG PL V+VG + + KVE++ R TG +++ E ++ Sbjct: 535 LLGVPLVVVVGRGW-GEGKVEVRDRFTGESREVAAESALS 573 >gi|120403299|ref|YP_953128.1| prolyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] gi|152112935|sp|A1T7H2|SYP_MYCVP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119956117|gb|ABM13122.1| prolyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] Length = 585 Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 134/223 (60%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G + G+YSWLPLG K L + I+R E Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYVRPVGPGLYSWLPLGLKVLRKIENIVRNEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTEYGDTLFRLQDRRNNDYLLGPTHEEMFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFD+ +G K++Y +Y Sbjct: 124 YSSYKDFPLRLYQIQNKYRDEARPRAGILRGREFLMKDSYSFDIDDDGLKNAYIAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF L ++ + + A SG +GG S EF+ +D GE T V C Sbjct: 184 QRIFDLLKVRYVIVSAVSGAMGGSASEEFLAESDVGEDTYVRC 226 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 63/167 (37%), Positives = 94/167 (56%), Gaps = 6/167 (3%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V+ARGIE+GH+F G KY+ A G +GK + MGSYGIG R+VA + E HD Sbjct: 419 VAARGIEIGHVFQLGRKYADAFGADVLGENGKPVRLTMGSYGIGVSRLVAVIAEQHHDEL 478 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP +V+PF + ++ I D R ++ A L ++G DV DD G +F A+ Sbjct: 479 GLRWPSTVSPFDVHVV-IANKDADARTGATELAAELDRLGVDVLLDDRTASPGVKFKDAE 537 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 LLG P V+VG + +D VE++ R G + ++ ++ A+ R S Sbjct: 538 LLGVPWIVVVGRGW-ADGIVELRDRFGGDKHEIP----VDGAAERIS 579 >gi|145594337|ref|YP_001158634.1| prolyl-tRNA synthetase [Salinispora tropica CNB-440] gi|189083512|sp|A4X5V6|SYP_SALTO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145303674|gb|ABP54256.1| prolyl-tRNA synthetase [Salinispora tropica CNB-440] Length = 595 Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 3/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S F L P +E H+L+ R M+ Q +GI+++LPLG + + + A++R E Sbjct: 1 MKMSTMFGATLHTAPGRSESEGHQLLQRAAMLRQVGQGIFAYLPLGWRTIRKIEAVLRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G E+S+P + A+LW ++GRY + G E+ R DR + ++ THEE++T + RS Sbjct: 61 LERVGGQEVSMPVVNPAELWKQTGRYFTIGPELARFRDRRGRDLVLAMTHEELVTFLGRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR+LP +Q+Q KFRD+ RPR G++R REF+MKDAYSFD+ G Y + + Sbjct: 121 EIESYRHLPRMVFQLQTKFRDDPRPRAGLIRVREFVMKDAYSFDVDAAGLAARYRAQYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDF 239 YL IF R GL + ++ G +GG L+HEF+ L GE T + C D F E F Sbjct: 181 YLTIFRRCGLPVAAVLSDVGMMGGSLAHEFVYLTPIGEDTLLIC--DSCGFAANREAATF 238 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 61/190 (32%), Positives = 105/190 (55%), Gaps = 2/190 (1%) Query: 259 TSDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T D+ + D+ E ++ +ARG+EVG IF GT+YS + A + ADG+ + MG Sbjct: 387 TGDITAARAGDACAECGSELRTARGVEVGQIFKLGTRYSTALGAEYLDADGQRKPLTMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R++A + E D +G+ P ++AP+++ L + + ++Y L G Sbjct: 447 YGIGVGRLLACLAEEHRDERGLRLPVTIAPYQVHLTLLDDLASAAGELARRVYDELWAAG 506 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD E+ G +FA AD++G PL+V +G + V++ E++ R TG+ + +EV+ Sbjct: 507 VEVLFDDRDERAGVKFADADVIGLPLRVTIGRRSVANGAAEVRDRATGVTAQVPFDEVVA 566 Query: 437 YASHRFSNNR 446 R + R Sbjct: 567 ELVRRIAALR 576 >gi|284992392|ref|YP_003410946.1| prolyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] gi|284065637|gb|ADB76575.1| prolyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] Length = 582 Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 93/218 (42%), Positives = 133/218 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+++P DAE+ SH+L++R G I + + G ++WLPLG + NV ++REE Sbjct: 3 LRMSTLFLRTLRDDPADAEVPSHRLLVRAGYIRRAAPGGFTWLPLGYRVFRNVERVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ P L + + + R+ YG + RL DR + GPTHEE+ T + + Sbjct: 63 MDRMGAQEVHFPALLPREPYEATNRWTEYGPNLFRLQDRRGADFLLGPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQIQ K+RDE RPR G+ R REF MKD+YSFD+ G SY + Sbjct: 123 LYSSYKDLPLSLYQIQTKYRDEARPRAGLFRGREFTMKDSYSFDVDDAGLDKSYAAHRDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y+R+F RLGL + + A SG +GG S EF+ GE Sbjct: 183 YIRVFDRLGLDYVIVSAMSGAMGGSRSEEFLHPTPIGE 220 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 88/157 (56%), Gaps = 3/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARG+E+GHIF G KY+ + +GK V MGSYGIG R VAA+ ES+HD G+ Sbjct: 418 ARGVEMGHIFQLGRKYAEALDLKVLDENGKLVTVTMGSYGIGVSRAVAAIAESTHDELGL 477 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 +WP VAP + ++ D + E + L G V +DD + G +F A+L Sbjct: 478 VWPREVAPADVHVVA-TGKDAAVFETAEALAQELLAAGLTVLYDDRPKVSPGVKFKDAEL 536 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 LG P V VG + +++ +E++ R TG RE++ + EV Sbjct: 537 LGMPTIVTVG-RGLAEGVLELRDRATGEREEVPVGEV 572 >gi|295100007|emb|CBK89096.1| prolyl-tRNA synthetase, family II [Eubacterium cylindroides T2-87] Length = 564 Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 95/250 (38%), Positives = 148/250 (59%), Gaps = 10/250 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F L+EN +D + S L++R GMI + S G+Y +P+G+K L + I+REE Sbjct: 1 MKLSKSFFYTLRENAKDEDSVSSNLLVRAGMIKKSSNGMYMIMPMGKKVLAKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A E+ +P L +++++SGR + +G M + DR K + GPTHEE+ Sbjct: 61 MDAKDAQELLMPALIPEEVYIKSGRREVFGSNMFTMNDRYMKRYVLGPTHEELFAVAASM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSY++ P+ YQIQ KFRDE RPR+G++R REF+MKDAY+FD+ G +Y KM+ + Sbjct: 121 DGKSYKDFPYNLYQIQTKFRDETRPRYGLIRVREFIMKDAYTFDIDEAGLDEAYAKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+ L+ ++A++G +GG LS E+ ++ GE D + E DF Sbjct: 181 YCRIFDRMELEYKIVKADTGAMGGLLSEEYQAISGIGE----------DIVVGCEGCDFS 230 Query: 241 DIISLNSIVE 250 + + +V+ Sbjct: 231 SNLEITEVVD 240 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/154 (38%), Positives = 91/154 (59%), Gaps = 1/154 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVG++F GTKY+ M+ + A+ + V MGSYGIG R +AA++E HD KGIIW Sbjct: 402 GIEVGNLFKLGTKYAQSMNLYYTDANNQLQPVWMGSYGIGLERCMAAIVEQHHDDKGIIW 461 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P VAPF +S++ I D+ + +Y +K V DD E+ G +F +L+G Sbjct: 462 PKEVAPFILSIVPISLKDEKQMEIANDLYNYCTKNKYSVLLDDRNERPGVKFKDMELIGI 521 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 P ++ VG K + +E +R TG +E++S++ + Sbjct: 522 PYRITVGRK-AQEGILEFSNRYTGEKEEVSIDSI 554 >gi|317177054|dbj|BAJ54843.1| prolyl-tRNA synthetase [Helicobacter pylori F16] Length = 577 Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 99/226 (43%), Positives = 133/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + M + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNMQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLHQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D LEE I Sbjct: 532 ERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKI 570 >gi|261839095|gb|ACX98860.1| prolyl-tRNA synthetase [Helicobacter pylori 52] Length = 577 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 99/226 (43%), Positives = 133/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + M + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNMQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 79/142 (55%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G DV DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDVLLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHR 421 L +I+G + + + + E R Sbjct: 532 ERLALIIGKQTLENKEFECIKR 553 >gi|320531911|ref|ZP_08032821.1| prolyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] gi|320135880|gb|EFW27918.1| prolyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] Length = 610 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 91/217 (41%), Positives = 134/217 (61%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASH+L++R + + + G+Y+WLPLG + L + I+R+E Sbjct: 4 RLSTSFIRTLREDPADAEVASHRLLVRACYVRRAAPGVYTWLPLGLRTLRKIEDIVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L A+ + +GR+D YG + +L DR D + PTHEE+ T + Sbjct: 64 DAMGGQEVHFPALLPAEPYQATGRWDDYGPTLFKLRDRKDGDYLLAPTHEEMFTLAVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G +Y +Y Sbjct: 124 YSSYKDLPAIVYQIQTKYRDEARPRAGIIRGREFVMKDSYSFDIDDAGLAAAYQAHRDTY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RLGL + + A +G +GG S EF+ + GE Sbjct: 184 ERIFTRLGLDYVIVNAMAGAMGGSHSEEFLYPCEIGE 220 Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 62/147 (42%), Positives = 86/147 (58%), Gaps = 2/147 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KYS + + +GK V MGSYGIG RV+AA+ E++HD KG+ Sbjct: 438 ARGIEIGHIFELGRKYSQALGLSVLDENGKARVVTMGSYGIGVSRVMAALAEANHDDKGL 497 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP +AP+ + ++ DQ D +I + L G +V +DD + G +FA A+L Sbjct: 498 TWPVQIAPYHVQVLA-TGKDQAVFDVAGQIASSLDADGVEVLYDDRRKVSAGVKFADAEL 556 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTG 424 LG P V+VG + VEI+ R TG Sbjct: 557 LGLPYTVVVGRDLAREGTVEIRDRRTG 583 >gi|317010519|gb|ADU84266.1| prolyl-tRNA synthetase [Helicobacter pylori SouthAfrica7] Length = 577 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 134/226 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQIGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDEEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I + LGL + A+SG IGG+ S EF+VL + GE + K+ Sbjct: 181 YKEILNDLGLDFRIVEADSGAIGGNKSKEFVVLTECGEDTIVVCKN 226 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G DV DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGVDVLLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D LEE I Sbjct: 532 ERLALIVGKQTLESREFECIKRANLEKQTLKDTELEEKI 570 >gi|325067070|ref|ZP_08125743.1| prolyl-tRNA synthetase [Actinomyces oris K20] Length = 605 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 91/217 (41%), Positives = 134/217 (61%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASH+L++R + + + G+Y+WLPLG + L + I+R+E Sbjct: 4 RLSTSFIRTLREDPADAEVASHRLLVRACYVRRAAPGVYTWLPLGLRTLRKIEDIVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L A+ + +GR+D YG + +L DR D + PTHEE+ T + Sbjct: 64 DAMGGQEVHFPALLPAEPYQATGRWDDYGPTLFKLRDRKDGDYLLAPTHEEMFTLAVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G +Y +Y Sbjct: 124 YSSYKDLPAVIYQIQTKYRDEARPRAGIIRGREFVMKDSYSFDIDDAGLAAAYQAHRDTY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RLGL + + A +G +GG S EF+ + GE Sbjct: 184 ERIFTRLGLDYVIVNAMAGAMGGSHSEEFLHPCEIGE 220 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 2/155 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KYS + T +GK V MGSYGIG RV+AA+ E++HD KG+ Sbjct: 438 ARGIEIGHIFELGRKYSQALGLTVLDENGKARVVTMGSYGIGVSRVMAALAEANHDDKGL 497 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP +AP+ + ++ DQ D E+I + L G +V +DD + G +FA A+L Sbjct: 498 TWPVQIAPYHVQVLA-TGKDQAVFDVAEQIASSLDADGVEVLYDDRRKVSAGVKFADAEL 556 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 LG P ++VG + VEI+ R TG R +S + Sbjct: 557 LGLPYTLVVGRDLAKEGTVEIRDRRTGERRSVSAD 591 >gi|159039093|ref|YP_001538346.1| prolyl-tRNA synthetase [Salinispora arenicola CNS-205] gi|189083509|sp|A8LYE7|SYP_SALAI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157917928|gb|ABV99355.1| prolyl-tRNA synthetase [Salinispora arenicola CNS-205] Length = 584 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 97/225 (43%), Positives = 134/225 (59%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S L L+E+P DAE+ SH+L+LR G + + + G Y+WLPLG+ LD V +IR E Sbjct: 3 LRMSTLLLRTLREDPADAEVPSHRLLLRAGYLRRAAPGGYTWLPLGKLVLDRVAEVIRTE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P L A+ + SGR+ YG +++ L DR + PTHEE + + Sbjct: 63 MLAIGDQEVHFPALLPAEPYRTSGRWTEYGDDLITLVDRRGAEHLLAPTHEEPAALLVKE 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SYR+ P +QIQ KFRDE RPR G++R REFLMKDAYSFDL G + +Y++ + Sbjct: 123 LFTSYRDFPVGIFQIQTKFRDEARPRAGLLRGREFLMKDAYSFDLDEAGLQAAYDRHRSA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 Y +IF RLGL + A SG +GG S EF+ + GE V C+ Sbjct: 183 YQKIFARLGLDYAVVHAVSGAMGGSASEEFLATSKIGEDVYVGCT 227 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 86/159 (54%), Gaps = 4/159 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIE+GHIF G +Y+ + G +G+ MG YGIG R VA + E HD +G++ Sbjct: 421 RGIEIGHIFQLGRRYTDAFTVDVLGPEGQSVRPTMGCYGIGVSRAVAVIAEQHHDERGLV 480 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP VAP + L+ QV + + RL++ G V DD G G +F A+L+ Sbjct: 481 WPTEVAPCDVHLVAAGRGPQV--ETALGLGNRLAEAGLRVLVDDRGHVSAGVKFTDAELV 538 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P V+VG + +D E++ R +G R D+ ++ ++ + Sbjct: 539 GIPRTVVVGRRL-ADGYAEVRDRPSGKRADVRVDALVEH 576 >gi|28493150|ref|NP_787311.1| prolyl-tRNA synthetase [Tropheryma whipplei str. Twist] gi|81839144|sp|Q83GR4|SYP_TROWT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|28476190|gb|AAO44280.1| prolyl-tRNA synthetase [Tropheryma whipplei str. Twist] Length = 613 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 132/223 (59%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S + +E+P E + +LR G I Q GI+SW+PLG K + IIR E + Sbjct: 6 SGFLFRTFREDPATTESRGYGFLLRAGYIRQTGSGIFSWMPLGLKVRHKIENIIRYEMGQ 65 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 AIE+ P L SADL+ +SGR+ YG ++ RL DR + PTHEE T + + Sbjct: 66 VNAIEVLFPALFSADLFKQSGRWSEYGDDIFRLKDRRQGDYLLAPTHEEAFTQMMKEICT 125 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR+LP T YQIQ K+RDELRPR G++RSREF MKDAYSFDL +G + SY +Y + Sbjct: 126 SYRDLPRTVYQIQDKYRDELRPRAGLLRSREFSMKDAYSFDLDEKGLRQSYEAQKRAYKK 185 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 IF RL + + ++A +G +GG +S EF+ + G+ + D Sbjct: 186 IFDRLKIDYVIVKANAGAMGGSVSEEFLHPTEMGDDTFVVTAD 228 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 8/181 (4%) Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + T DV + K D RGIE+GH+F G KYS + DG + V MG Sbjct: 407 FDCTLDVSSIKTGDKSEWGPVTVKRGIEIGHLFQLGLKYSNALGLKVLDKDGYNKAVFMG 466 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+ A + E + D +G+ WP +APF + ++ + + A ++ L+ Sbjct: 467 SYGIGVSRLFALIAEKNCDERGLKWPAVLAPFDLHVVLLSS-------ARAELIDSLTDC 519 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G +F A L+G P +++G K VE+ R R + L+E+I Sbjct: 520 GLDVLVDDRRVSPGVKFTDAQLIGVPKIIVIGDK-TRGEDVEVWDRANDQRTVLPLKEMI 578 Query: 436 N 436 Sbjct: 579 Q 579 >gi|322786154|gb|EFZ12760.1| hypothetical protein SINV_13030 [Solenopsis invicta] Length = 347 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 106/329 (32%), Positives = 174/329 (52%), Gaps = 30/329 (9%) Query: 25 LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESG 84 LM+ G+I S G+Y+ LPLG + L+ + ++ +E GA ++ +P L S LW ++ Sbjct: 18 LMINYGIIKPVSIGMYALLPLGMRILNKLINLVDKEMTSIGAEKILLPALTSVALWKKTD 77 Query: 85 RYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLPFTFYQIQLKFRDEL 143 RYD E+ L DR+ K I PTHEE + D+ S + S ++LP YQI K+RDE+ Sbjct: 78 RYDCNKTELFTLMDRHKKEYILSPTHEEAICDLISSAGQFSAKSLPLKLYQISSKWRDEM 137 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 +PR G++RSREF+MKD Y+FD + + ++++YN + SY IF ++G++ + G IG Sbjct: 138 KPRLGLLRSREFIMKDLYTFDTSLDNARYTYNLVCESYNNIFRKIGVEYTKSIGDMGTIG 197 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 G +SHE+ +++ GE + + F S+N + + T+ +++H Sbjct: 198 GLMSHEYHYISNIGEDTILRCR-LCHF-------------SINQSISKTTSCPECKNELH 243 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 EVGH F TKYS P+ A + + K + MGS+G+G R Sbjct: 244 QHT--------------AAEVGHTFLLDTKYSQPLKALY-VEENKSKPMIMGSFGLGLSR 288 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLI 352 ++ +E + WP +AP+ I +I Sbjct: 289 IITLAVEILSTKNELRWPVKLAPYTICVI 317 >gi|218132358|ref|ZP_03461162.1| hypothetical protein BACPEC_00217 [Bacteroides pectinophilus ATCC 43243] gi|217992696|gb|EEC58698.1| hypothetical protein BACPEC_00217 [Bacteroides pectinophilus ATCC 43243] Length = 578 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 131/217 (60%), Gaps = 1/217 (0%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 +E P D I S++ +R G I + GIYS P ++ + IIREE + G E+ Sbjct: 11 FKEKPADCVIDSYEFCIRGGYIKYVANGIYSLFPPMRRITQKIEKIIREEMDSVGCQEVL 70 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + LW ESGRY S G E+LR DRN M+ G THEE + R + +SY PF Sbjct: 71 FPVTLPSSLWEESGRYQSVGDELLRFKDRNGSQMVLGMTHEEAAVHLVREYGRSYARYPF 130 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + YQIQ KFRDE RPR G++R REF MKDAYSF LT + + Y +M SY RIF ++G+ Sbjct: 131 SIYQIQTKFRDEARPRAGLIRVREFTMKDAYSFHLTQKSLEDYYQQMANSYNRIFAKVGI 190 Query: 191 -KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + I ++++SG IGG++SHE+++L D GE + D Sbjct: 191 PEVISVKSDSGMIGGNVSHEYMLLCDAGEDSIVLCDD 227 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 59/157 (37%), Positives = 93/157 (59%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RGIEVG+IF GTKYS M + +G++ MG YGIG R+ A++ E+ HD G Sbjct: 403 SRGIEVGNIFQLGTKYSDAMGLKYVDTNGEEKVPIMGCYGIGIGRLAASICEAHHDDYGP 462 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP SVAP+++ + ++A C++ ++IY L +V +DD G F+ ADLL Sbjct: 463 IWPISVAPWQVHICCMRADKIECKEVTDRIYNELQSSNVEVLYDDRKVSAGVMFSDADLL 522 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P+++I G K + KVEI R +++ + ++ V+ Sbjct: 523 GIPIRIIAGPKNIEQGKVEILTRNKAVKKLVDIDSVV 559 >gi|50954884|ref|YP_062172.1| prolyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] gi|81826655|sp|Q6AEX8|SYP_LEIXX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|50951366|gb|AAT89067.1| prolyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 590 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 132/217 (60%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R + YFL L+E+P DAE+ SH+L++R G I + + G+++WLPLG + + IIREE Sbjct: 4 RLTNYFLRTLREDPADAEVTSHRLLVRAGYIRRQAPGVFAWLPLGLRVKAKIERIIREEL 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+ P L + + +GR++ YG + L DR + PTHEE T + + Sbjct: 64 AAAGAHEVHFPALLPREPYEITGRWEEYGDALFHLKDRKGADYLLAPTHEEAFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T +QIQ K+RDE RPR G++R REF MKDAYSFD T G SY +Y Sbjct: 124 YSSYKDLPLTIFQIQDKYRDEARPRAGLLRGREFTMKDAYSFDATDAGLDVSYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RLGL + ++A++G +GG S EF+ GE Sbjct: 184 ERIFARLGLDFVIVQADAGAMGGSRSEEFLHPTPIGE 220 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 101/183 (55%), Gaps = 5/183 (2%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + T +V K D P+ ARG+E+GH+F G KY+ + T +GK V Sbjct: 403 WDGTVEVAEVKAGDPAPDGSGPVELARGMEIGHVFQLGRKYADALGLTVLDENGKLVTVT 462 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MGSYGIG R++A + E ++D KG++WP++VAPF + ++ +QV D E+ A+L Sbjct: 463 MGSYGIGVTRILAIIAEENNDDKGLVWPEAVAPFDVHVV-AAGREQVAFDVAEQAVAQLE 521 Query: 374 KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 VG DV +DD + G +F A+L+G P ++VG + + +VE+ R G + L Sbjct: 522 AVGLDVLYDDRPKVSPGVKFGDAELIGVPRVLVVG-RGAAQGEVELWDRRGGNHTTLPLS 580 Query: 433 EVI 435 E + Sbjct: 581 EAV 583 >gi|317181547|dbj|BAJ59331.1| prolyl-tRNA synthetase [Helicobacter pylori F57] Length = 577 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 133/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E ++ + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDTESLDKEFSNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D LEE I Sbjct: 532 ERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKI 570 >gi|28572736|ref|NP_789516.1| prolyl-tRNA synthetase [Tropheryma whipplei TW08/27] gi|81839165|sp|Q83HI1|SYP_TROW8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|28410869|emb|CAD67254.1| prolyl-tRNA synthetase [Tropheryma whipplei TW08/27] Length = 601 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 132/223 (59%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S + +E+P E + +LR G I Q GI+SW+PLG K + IIR E + Sbjct: 6 SDFLFRTFREDPATTESRGYGFLLRAGYIRQTGSGIFSWMPLGLKVRHKIENIIRYEMRQ 65 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 AIE+ P L SADL+ +SGR+ YG ++ RL DR + PTHEE T + + Sbjct: 66 VNAIEVLFPALFSADLFKQSGRWSEYGDDIFRLKDRRQGDYLLAPTHEEAFTQMMKEICT 125 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR+LP T YQIQ K+RDELRPR G++RSREF MKDAYSFDL +G + SY +Y + Sbjct: 126 SYRDLPRTVYQIQDKYRDELRPRAGLLRSREFSMKDAYSFDLDEKGLRQSYEAQKRAYKK 185 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 IF RL + + ++A +G +GG +S EF+ + G+ + D Sbjct: 186 IFDRLEIDYVIVKANAGAMGGSVSEEFLHPTEMGDDTFVVTAD 228 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 88/186 (47%), Gaps = 8/186 (4%) Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + T DV + K D RGIE+GH+F G KYS + DG + V MG Sbjct: 407 FDCTLDVSSIKTGDKSEWGPVTVKRGIEIGHLFQLGLKYSNALGLKVLDKDGYNKAVFMG 466 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+ A + E + D +G+ WP +APF + ++ + + A ++ L+ Sbjct: 467 SYGIGVSRLFALIAEKNCDERGLKWPAVLAPFDLHVVLLSS-------ARAELIDSLTDC 519 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G +F A L+G P +++G K VE+ R R + L+E+I Sbjct: 520 GLDVLVDDRRVSPGVKFTDAQLIGVPKIIVIGDK-TRGEDVEVWDRANDQRTVLPLKEMI 578 Query: 436 NYASHR 441 R Sbjct: 579 QGVIQR 584 >gi|317013684|gb|ADU81120.1| prolyl-tRNA synthetase [Helicobacter pylori Gambia94/24] Length = 577 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 133/224 (59%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + + + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENVTHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + M + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDTESLGEEFLNMQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y I LGL + A+SG IGG S EF+VL + GE T V C Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVC 224 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G DV DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGVDVLLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D LEE I Sbjct: 532 ERLALIVGKQTLESKEFECIKRANLEKQTIKDTELEEKI 570 >gi|326771743|ref|ZP_08231028.1| proline--tRNA ligase [Actinomyces viscosus C505] gi|326637876|gb|EGE38777.1| proline--tRNA ligase [Actinomyces viscosus C505] Length = 610 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 91/217 (41%), Positives = 134/217 (61%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASH+L++R + + + G+Y+WLPLG + L + I+R+E Sbjct: 4 RLSTSFIRTLREDPADAEVASHRLLVRACYVRRAAPGVYTWLPLGLRTLRKIEDIVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L A+ + +GR+D YG + +L DR D + PTHEE+ T + Sbjct: 64 DAMGGQEVHFPALLPAEPYQATGRWDDYGPTLFKLRDRKDGDYLLAPTHEEMFTLAVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G +Y +Y Sbjct: 124 YSSYKDLPAVVYQIQTKYRDEARPRAGIIRGREFVMKDSYSFDIDDAGLAAAYQAHRDTY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RLGL + + A +G +GG S EF+ + GE Sbjct: 184 ERIFTRLGLDYVIVNAMAGAMGGSHSEEFLHPCEIGE 220 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 2/149 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KYS + T +GK V MGSYGIG RV+AA+ E++HD KG+ Sbjct: 438 ARGIEIGHIFELGRKYSQALGLTVLDENGKARVVTMGSYGIGVSRVMAALAEANHDDKGL 497 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP +AP+ + ++ DQ D E+I + L G +V +DD + G +FA A+L Sbjct: 498 TWPAQIAPYHVQVLAT-GKDQAVFDVAEQIASSLDADGVEVLYDDRRKVSAGVKFADAEL 556 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 LG P ++VG + VEI+ R TG R Sbjct: 557 LGLPYTLVVGRDLAKEGTVEIRDRRTGER 585 >gi|320528402|ref|ZP_08029564.1| prolyl-tRNA synthetase [Solobacterium moorei F0204] gi|320131316|gb|EFW23884.1| prolyl-tRNA synthetase [Solobacterium moorei F0204] Length = 561 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 96/224 (42%), Positives = 138/224 (61%), Gaps = 1/224 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ YF I +EN +D + S L++R GMI + S G+Y LP+G + L + AIIR+E N Sbjct: 4 KNSYFFTI-RENAKDEDSVSSNLLVRAGMIKKSSAGVYMMLPMGNRVLSKIYAIIRDEMN 62 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+S+P+L +++V SGR +GK M L DR + GPTHEE+ + I Sbjct: 63 KIDCQELSMPSLIPEEVYVSSGRRAGFGKGMFSLEDRKGVPYVLGPTHEELFAMAAKMQI 122 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 +SY+++PF+ YQIQ KFRDE RPR+G++R REF MKD+Y+FD G SY K F +Y Sbjct: 123 RSYKDMPFSLYQIQTKFRDEPRPRYGLIRVREFTMKDSYTFDKDEAGLDVSYAKQFNAYK 182 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 I +RL L +RA++G +GG LS EF + GE + S D Sbjct: 183 NIMNRLHLDYRIVRADTGVMGGLLSEEFQAITPLGEDILVLSDD 226 Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 4/190 (2%) Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGAD 306 V Q D+ N + D P + V A GIEVG+ F GTKYS + + + Sbjct: 368 VNQRDFTLTGHGDLRNIQEGDKNPNGEGVVHFAHGIEVGNTFKLGTKYSKALDLQYLDQN 427 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + YV MGSYGIG R +AA+ E + D GI WP +APF+++++ I D+ Sbjct: 428 NQLQYVWMGSYGIGPARAMAALAEQNADENGINWPKDLAPFQVAVVIISMKDEEQVRIGN 487 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 +++ L G +V D+ E+ G +F +L+G P ++ VG + V+D KVE+K R TG Sbjct: 488 ELHDELQAQGIEVVLDNRDERPGVKFKDMELIGIPFRITVG-RGVADGKVELKSR-TGES 545 Query: 427 EDMSLEEVIN 436 ++ + E I+ Sbjct: 546 MEVPVTEAID 555 >gi|328947267|ref|YP_004364604.1| Prolyl-tRNA synthetase [Treponema succinifaciens DSM 2489] gi|328447591|gb|AEB13307.1| Prolyl-tRNA synthetase [Treponema succinifaciens DSM 2489] Length = 603 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 90/224 (40%), Positives = 138/224 (61%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ L+++P +A I+SH+LM+R +I + G+Y+++P G +A + II+EE Sbjct: 1 MKTSQIPFRTLRDSPSEAIISSHQLMMRADLIRKLGNGLYTYMPFGLRAYRKLEKIIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +GA+E + D+W ESGR+++ G +ML+ +R + M+ PT EE T I R Sbjct: 61 IEASGAMEFKPTVIVPGDIWKESGRWETMGPQMLKAQNRQQQDMVVSPTAEEAYTAIMRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI K+RDE+RPR+GVMR REF M D Y+ + E SY + Sbjct: 121 GLTSYKQLPINCYQINTKYRDEIRPRYGVMRGREFNMMDGYTLNADDESLDQSYQAYAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFC 223 YLRIF RLGL I ++A++G +GG S EF+V ++ G +T + C Sbjct: 181 YLRIFKRLGLDVITVKADTGAMGGSGSEEFMVESEIGDDTLILC 224 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/184 (38%), Positives = 107/184 (58%), Gaps = 5/184 (2%) Query: 259 TSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T+D+ K D P + + +G E+GHIF G KY+ M+ T+ +GK MG Sbjct: 412 TADLRTAKAGDICPVCGKPFYTTKGNELGHIFKLGKKYTESMNVTYLDKNGKSAVPTMGC 471 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG RV+A++IE+ HD +GIIWP S AP++++++ IK + ++A +KIY L K Sbjct: 472 YGIGVDRVLASIIEAFHDDRGIIWPMSTAPYQVAIVPIK-YSGAMKEAADKIYDELLKAS 530 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +F DL+GFP+++ VG K + + VEIK R + E + LE Sbjct: 531 VEVLLDDRDERPGVKFNDMDLIGFPVRITVGDKNLPN--VEIKMRSSEQAELVPLENAAA 588 Query: 437 YASH 440 AS Sbjct: 589 KASE 592 >gi|108562666|ref|YP_626982.1| prolyl-tRNA synthetase [Helicobacter pylori HPAG1] gi|123373844|sp|Q1CUR4|SYP_HELPH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|107836439|gb|ABF84308.1| prolyl-tRNA synthetase [Helicobacter pylori HPAG1] Length = 577 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 133/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I + LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILNDLGLDFRIVEADSGAIGGSKSKEFVVLTECGEDTIVVCKN 226 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLRASFLDKNGKEQFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +I+G + + + + E R ++ D+ LEE I Sbjct: 532 ERLALIIGKQTLENKEFECIKRANLEKQTIKDIELEEKI 570 >gi|261837685|gb|ACX97451.1| prolyl-tRNA synthetase [Helicobacter pylori 51] Length = 577 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 132/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENATHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + M + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNMQST 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRVVEADSGAIGGSKSKEFVVLTECGEDTIVVCKN 226 Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDNLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D LEE I Sbjct: 532 ERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKI 570 >gi|254778944|ref|YP_003057049.1| prolyl-tRNA synthetase [Helicobacter pylori B38] gi|254000855|emb|CAX28787.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) (Global RNA synthesis factor) [Helicobacter pylori B38] Length = 577 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 132/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R++ A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGISRLLGAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +I+G + + + E R ++ D+ LEE I Sbjct: 532 ERLALIIGKQTLESKEFECIKRANLEKQTIKDIELEEKI 570 >gi|108799043|ref|YP_639240.1| prolyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119868158|ref|YP_938110.1| prolyl-tRNA synthetase [Mycobacterium sp. KMS] gi|126434646|ref|YP_001070337.1| prolyl-tRNA synthetase [Mycobacterium sp. JLS] gi|122977105|sp|Q1BAA0|SYP_MYCSS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152112933|sp|A1UER2|SYP_MYCSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|108769462|gb|ABG08184.1| prolyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119694247|gb|ABL91320.1| prolyl-tRNA synthetase [Mycobacterium sp. KMS] gi|126234446|gb|ABN97846.1| prolyl-tRNA synthetase [Mycobacterium sp. JLS] Length = 584 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 92/223 (41%), Positives = 134/223 (60%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G + G+Y+WLPLG + + I+R+E Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYVRPVGPGLYTWLPLGLRVFRKIEQIVRDEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P L + + R+ YG + RL DR D + GPTHEE+ T + Sbjct: 64 TAIGGQEILFPALLPRAPYETTNRWTEYGDTLFRLKDRRDNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P +QIQ K+RDE RPR G++R REF+MKD+YSFD+ +G K +Y+ +Y Sbjct: 124 YSSYKDFPLILFQIQTKYRDEARPRAGILRGREFVMKDSYSFDVDDDGLKTAYHLHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF RLG+ + + A SG +GG S EF+ ++ GE T V C Sbjct: 184 QRIFARLGVHYVIVSAVSGAMGGSASEEFLAESEVGEDTFVRC 226 Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 91/157 (57%), Gaps = 2/157 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 VSARGIE+GHIF G KY+ SA G DGK + MGSYGIG R+VA + E HD Sbjct: 420 VSARGIEIGHIFQLGRKYTEAFSADVLGEDGKPVRLTMGSYGIGVSRLVAVIAEQQHDEL 479 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP +VAPF + ++ I D R ++ L ++G +V DD G +F A+ Sbjct: 480 GLRWPAAVAPFDVHVV-IANKDDGARTGATELAGELDRLGLEVLLDDRKSSPGVKFKDAE 538 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 LLG P V+VG + D VE++ R +G + ++ +++ Sbjct: 539 LLGVPWIVVVGRGW-GDGVVELRDRFSGEKREIGVDD 574 >gi|118463800|ref|YP_882877.1| prolyl-tRNA synthetase [Mycobacterium avium 104] gi|152112931|sp|A0QIY9|SYP_MYCA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118165087|gb|ABK65984.1| prolyl-tRNA synthetase [Mycobacterium avium 104] Length = 582 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 134/223 (60%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I + G+YSWLPLG + L + I+REE Sbjct: 4 RMSQLFLRTLRDDPADAEVPSHKLLIRAGYIRPVAPGLYSWLPLGLRVLRRIEHIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYEATNRWTEYGDSVFRLQDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPVLLYQIQNKYRDEARPRAGILRVREFVMKDSYSFDIDDAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF RL ++ + + A SG +GG S EF+ + GE T V C Sbjct: 184 QRIFARLQVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRC 226 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 63/154 (40%), Positives = 86/154 (55%), Gaps = 2/154 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 VSARGIEV HIF G KY+ +A G DGK + MGSYG+G R+VA + E HD Sbjct: 416 VSARGIEVAHIFQLGRKYTDAFTADVLGEDGKPVRLTMGSYGLGVSRMVAVIAEQHHDEL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP SVAPF + L+ I D R + L ++G +V DD G +F A+ Sbjct: 476 GLRWPASVAPFDVHLV-IANKDAQARAGATALADDLDRLGVEVLLDDRQASPGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 LLG P V+VG + +D VE++ R G +++ Sbjct: 535 LLGVPWIVVVGRGW-ADGVVELRDRFAGQTRELA 567 >gi|254776130|ref|ZP_05217646.1| prolyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291] Length = 582 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 134/223 (60%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I + G+YSWLPLG + L + I+REE Sbjct: 4 RMSQLFLRTLRDDPADAEVPSHKLLIRAGYIRPVAPGLYSWLPLGLRVLRRIEHIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYEATNRWTEYGDSVFRLQDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPVLLYQIQNKYRDEARPRAGILRVREFVMKDSYSFDIDDAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF RL ++ + + A SG +GG S EF+ + GE T V C Sbjct: 184 QRIFARLQVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRC 226 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 63/154 (40%), Positives = 86/154 (55%), Gaps = 2/154 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 VSARGIEV HIF G KY+ +A G DGK + MGSYG+G R+VA + E HD Sbjct: 416 VSARGIEVAHIFQLGRKYTDAFTADVLGEDGKPVRLTMGSYGLGVSRMVAVIAEQHHDEL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP SVAPF + L+ I D R + L ++G +V DD G +F A+ Sbjct: 476 GLRWPASVAPFDVHLV-IANKDAQARAGATALADDLDRLGVEVLLDDRQASPGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 LLG P V+VG + +D VE++ R G +++ Sbjct: 535 LLGVPWIVVVGRGW-ADGVVELRDRFAGQTRELA 567 >gi|41409011|ref|NP_961847.1| prolyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis K-10] gi|81831677|sp|Q73VU8|SYP_MYCPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|41397370|gb|AAS05230.1| ProS [Mycobacterium avium subsp. paratuberculosis K-10] Length = 582 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 134/223 (60%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I + G+YSWLPLG + L + I+REE Sbjct: 4 RMSQLFLRTLRDDPADAEVPSHKLLIRAGYIRPVAPGLYSWLPLGLRVLRRIEHIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYEATNRWTEYGDSVFRLQDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPVLLYQIQNKYRDEARPRAGILRVREFVMKDSYSFDIDDAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF RL ++ + + A SG +GG S EF+ + GE T V C Sbjct: 184 QRIFARLQVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRC 226 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 63/154 (40%), Positives = 86/154 (55%), Gaps = 2/154 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 VSARGIEV HIF G KY+ +A G DGK + MGSYG+G R+VA + E HD Sbjct: 416 VSARGIEVAHIFQLGRKYTDAFTADVLGEDGKPVRLTMGSYGLGVSRMVAVIAEQHHDEL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP SVAPF + L+ I D R + L ++G +V DD G +F A+ Sbjct: 476 GLRWPASVAPFDVHLV-IANKDAQARAGATALADDLDRLGVEVLLDDRQASPGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 LLG P V+VG + +D VE++ R G +++ Sbjct: 535 LLGVPWIVVVGRGW-ADGVVELRDRFAGQTRELA 567 >gi|308063100|gb|ADO04987.1| prolyl-tRNA synthetase [Helicobacter pylori Sat464] Length = 577 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 132/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIASN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F + K+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNAKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDGAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D+ LEE I Sbjct: 532 ERLALIVGKQTLESKEFECIKRANLEKQTLKDIELEEKI 570 >gi|291538408|emb|CBL11519.1| prolyl-tRNA synthetase, family II [Roseburia intestinalis XB6B4] Length = 567 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 102/231 (44%), Positives = 139/231 (60%), Gaps = 5/231 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYS-WLPLGQKALDNVNAIIRE 59 M+ K +E P D I SH LM++ G + + GIYS +LPL ++ + I+RE Sbjct: 1 MKLEKLIGERFRERPADCVIDSHALMVKGGYMKYMANGIYSSYLPL-KRITHKIEQILRE 59 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E ++ E+S P + A LW ESGRY+S G+E+LR DRN+ M+ G THEE + R Sbjct: 60 EMDKLDGQEVSFPVVMPASLWEESGRYESVGEELLRFTDRNNAKMVLGMTHEEAAVHLVR 119 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 + KSY PF YQIQ KFRDE RPR G++R REF MKDAYSF + E Y K Sbjct: 120 EYAKSYNKYPFMIYQIQTKFRDEARPRAGLIRVREFTMKDAYSFHTSQEDLNQYYEKCHK 179 Query: 180 SYLRIFHRLGL-KSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK-DF 227 +Y RIF R G+ + + + ++SG +GG LSHEF++L GE V C++ DF Sbjct: 180 AYERIFERAGIPEVVSVASDSGMMGGSLSHEFMLLTPVGEDSIVLCNECDF 230 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/155 (38%), Positives = 92/155 (59%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RGIEVG+IF G KY+ M T+ +G+ MG YGIG R+ AAV E+ HD G Sbjct: 404 SRGIEVGNIFQLGDKYTKAMKMTYVDQNGESKTPIMGCYGIGVGRLAAAVCEAHHDEYGP 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP S+AP+++ L ++A ++ R + +Y +L ++G +V +DD G F+ ADLL Sbjct: 464 IWPKSIAPWQVHLCAVRADNEEVRKFADDLYEKLQEMGIEVIYDDRTVSAGVMFSDADLL 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G PL+VIV + + VE+ R ++ + +EE Sbjct: 524 GIPLRVIVSPRNMKQGVVEVASRDKTLQTQVKMEE 558 >gi|332673080|gb|AEE69897.1| proline--tRNA ligase [Helicobacter pylori 83] Length = 577 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 132/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRVVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDREAHFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D LEE I Sbjct: 532 ERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKI 570 >gi|291535914|emb|CBL09026.1| prolyl-tRNA synthetase, family II [Roseburia intestinalis M50/1] Length = 567 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 102/231 (44%), Positives = 139/231 (60%), Gaps = 5/231 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYS-WLPLGQKALDNVNAIIRE 59 M+ K +E P D I SH LM++ G + + GIYS +LPL ++ + I+RE Sbjct: 1 MKLEKLIGERFRERPADCVIDSHALMVKGGYMKYMANGIYSSYLPL-KRITRKIEQILRE 59 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E ++ E+S P + A LW ESGRY+S G+E+LR DRN+ M+ G THEE + R Sbjct: 60 EMDKLDGQEVSFPVVMPASLWEESGRYESVGEELLRFTDRNNAKMVLGMTHEEAAVHLVR 119 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 + KSY PF YQIQ KFRDE RPR G++R REF MKDAYSF + E Y K Sbjct: 120 EYAKSYNKYPFMIYQIQTKFRDEARPRAGLIRVREFTMKDAYSFHTSQEDLNQYYEKCHK 179 Query: 180 SYLRIFHRLGL-KSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSK-DF 227 +Y RIF R G+ + + + ++SG +GG LSHEF++L GE V C++ DF Sbjct: 180 AYERIFERAGIPEVVSVASDSGMMGGSLSHEFMLLTPVGEDSIVLCNECDF 230 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/155 (38%), Positives = 92/155 (59%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RGIEVG+IF G KY+ M T+ +G+ MG YGIG R+ AAV E+ HD G Sbjct: 404 SRGIEVGNIFQLGDKYTRAMKMTYVDQNGESKTPIMGCYGIGVGRLAAAVCEAHHDEYGP 463 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP S+AP+++ L ++A ++ R + +Y +L ++G +V +DD G F+ ADLL Sbjct: 464 IWPKSIAPWQVHLCAVRADNEEVRKFADDLYEKLQEIGIEVIYDDRTVSAGVMFSDADLL 523 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G PL+VIV + + VE+ R ++ + +EE Sbjct: 524 GIPLRVIVSPRNMKQGVVEVASRDKTLQTQVKMEE 558 >gi|328779973|ref|XP_001122171.2| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Apis mellifera] Length = 428 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 122/442 (27%), Positives = 215/442 (48%), Gaps = 38/442 (8%) Query: 2 RRSKYFLPILQE--NPRDAEI--ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAII 57 + S+ F P+ + EI S++ +L+ G+I Q + G+Y+ LPLG + + + A++ Sbjct: 11 KLSQLFQPVTATIATTKQTEIRSKSYENLLKYGLIKQVTTGMYAILPLGLRIFNKLTALV 70 Query: 58 REEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDI 117 E + GA ++ +P L LW ++ R ++ E+ ++ DR + I PTHEE + + Sbjct: 71 DNEMQKIGAQKLLLPALTPTHLWKKTDRLNNV-TELFKIQDRAQRQYILSPTHEESICSV 129 Query: 118 FRS-HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + I S + LP YQI K+RDE++PRFG +RSREF+MKD Y+FD+ ++ +Y Sbjct: 130 MSTIGILSPKMLPLKLYQISNKWRDEIKPRFGFLRSREFMMKDLYTFDINLNNAQETYAL 189 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + +Y IF ++G+ I + G IG +SHE+ ++D GE + C PS Sbjct: 190 VCNAYENIFKKIGITYIKSIGDPGLIGDSISHEYHYISDIGE-DIVCI-------CPSCQ 241 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + I S + + NEK EVGH F TKY++ Sbjct: 242 YSINKTICKESYCPK-------CKNAFNEK-------------SAAEVGHTFLLNTKYTI 281 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 P+ K + + + MG +G+G R+ + E + + WP ++AP+ + LI KA Sbjct: 282 PLEVKIK-INNESIPLVMGCFGLGLSRIFTVMTELLSTKEELRWPKNLAPYTVCLIPPKA 340 Query: 357 --HDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 ++ +++ L+++ D DD IG +F A + GFP +I+ + Sbjct: 341 GSKEENKSQYVKEVMEILNQLNIDTILDDRTNLTIGKRFMHARITGFPYVIIIDCSGLQI 400 Query: 414 SKVEIKHRLTGIREDMSLEEVI 435 +++ + G E +L + + Sbjct: 401 AEITGISCIAGALEKSTLSQSV 422 >gi|317012082|gb|ADU82690.1| prolyl-tRNA synthetase [Helicobacter pylori Lithuania75] Length = 577 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 132/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 77/142 (54%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDGAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHR 421 L +I+G + + + + E R Sbjct: 532 ERLALIIGKQTLENKEFECIKR 553 >gi|317180044|dbj|BAJ57830.1| prolyl-tRNA synthetase [Helicobacter pylori F32] Length = 577 Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 132/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D LEE I Sbjct: 532 ERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKI 570 >gi|168334910|ref|ZP_02693030.1| prolyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B'] Length = 570 Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 99/225 (44%), Positives = 137/225 (60%), Gaps = 2/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK +E P++A+ SH +LR G I Q + G+++ L QK N+ IIREE Sbjct: 1 MLLSKLLGERFKEKPQEAKSISHIFLLRGGYIRQVANGLFTMLLPAQKVKVNIEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ E+ P + +LW ESGR++S G E+LR+ DR DK ++ G THEE + RS Sbjct: 61 MNKIDGQEVIFPVVLPGELWQESGRFESVGSELLRMKDRTDKDLVLGMTHEEAAVHLARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSY PF YQIQ KFRDE R R G++R REF MKDAYSF + E Y+K + Sbjct: 121 EAKSYTQYPFMIYQIQTKFRDEARSRGGLIRVREFTMKDAYSFHTSNEDLDAYYDKCLKA 180 Query: 181 YLRIFHRLGL-KSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y I+ R G+ + + + ++SG +GG++SHEF++LAD GE T V C Sbjct: 181 YNEIYRRTGVPEVVCVESDSGMMGGNVSHEFMLLADIGEDTIVVC 225 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/155 (41%), Positives = 95/155 (61%), Gaps = 1/155 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVG+IF GTKY+ M T+ DGK MG YGIG R++A+ IE+ HD G I Sbjct: 402 RGIEVGNIFKLGTKYTDVMKMTYVDQDGKSKTPIMGCYGIGVGRLIASAIEAHHDDYGPI 461 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP S+AP+++ + +K+ +IY +LS+ +V +DD G G QFA ADLLG Sbjct: 462 WPISIAPWQVHICALKSKTMDINAIGAEIYGKLSQ-EFEVIFDDRGAAPGVQFADADLLG 520 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 P+++++G K + + VEI R I++ ++ E+V Sbjct: 521 VPVRIVLGEKNLKNGNVEIVTRDKSIKKLIAKEDV 555 >gi|297379463|gb|ADI34350.1| prolyl-tRNA synthetase [Helicobacter pylori v225d] Length = 577 Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 132/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++ ++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSTILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D LEE I Sbjct: 532 ERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKI 570 >gi|225377425|ref|ZP_03754646.1| hypothetical protein ROSEINA2194_03073 [Roseburia inulinivorans DSM 16841] gi|225210771|gb|EEG93125.1| hypothetical protein ROSEINA2194_03073 [Roseburia inulinivorans DSM 16841] Length = 575 Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 106/270 (39%), Positives = 153/270 (56%), Gaps = 14/270 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYS-WLPLGQKALDNVNAIIRE 59 M+ K +E P D ++ SH LM+R G + + GIYS ++PL ++ + IIRE Sbjct: 1 MKLEKLVGDRFKERPADCQVDSHALMIRGGYMKNVANGIYSSYMPL-RRITRKIEQIIRE 59 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E + E+ P + A LW ESGRYDS GKE+LR DRN M+ G THEE + R Sbjct: 60 EMDAIDGQEVQFPVVMPASLWQESGRYDSIGKELLRFTDRNGAPMVLGMTHEEAAVQLVR 119 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 + +SY PF YQIQ KFRDE RPR G++R REF MKDAYSF + E + Y+K Sbjct: 120 EYGQSYAKYPFMIYQIQTKFRDEARPRAGLIRVREFTMKDAYSFHTSQEDLEQYYDKCHK 179 Query: 180 SYLRIFHRLGL-KSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENT 237 +Y RI+ R G+ + + ++++SG +GG++SHEF++L GE V C++ D+ E Sbjct: 180 AYERIYARAGIPEVVSVKSDSGMMGGNVSHEFMLLTPIGEDSIVICNE--CDYRANMEAA 237 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + +IVE T + VH ++ Sbjct: 238 E--------NIVENETEAMQELTKVHTPEM 259 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 75/245 (30%), Positives = 122/245 (49%), Gaps = 23/245 (9%) Query: 200 GPIGGDLSHEFIVLAD---TGETQVFCSKDFMDFPIPSENTD--FDDI--ISLNSIVEQW 252 GP+ + + + IVL D G T + C + +D+ N + F D+ + L +VE Sbjct: 331 GPV--NQNADCIVLFDRSLKGTTNLVCGANEVDYHYTGLNMEREFPDVEYVDLAKVVEGG 388 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P + +RGIEVG+IF GTKY+ M+ T+ DG Sbjct: 389 ICPCCGKKSL--------------TISRGIEVGNIFQLGTKYTKTMNMTYVDKDGISKNP 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R+ A++ E+ HD G IWP S+AP+++ + + + R+ + +Y L Sbjct: 435 IMGCYGIGVGRMAASICEAHHDDYGPIWPMSIAPWQVHICAMNLDKEGVREVADTLYENL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G +V +DD G++F+ ADLLG P++V+V + + +S VE+ R + E + +E Sbjct: 495 QNAGVEVIYDDRSVSAGNKFSDADLLGVPVRVVVSPRNLKESVVEVSTRDKSLMEKVPVE 554 Query: 433 EVINY 437 Y Sbjct: 555 NAEQY 559 >gi|317008889|gb|ADU79469.1| prolyl-tRNA synthetase [Helicobacter pylori India7] Length = 577 Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 132/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDEEFLNTQNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++ ++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSTILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +I+G + + + E R ++ D+ LEE I Sbjct: 532 ERLALIIGKQTLESREFECIKRANLEKQTLKDIELEEKI 570 >gi|315586236|gb|ADU40617.1| proline--tRNA ligase [Helicobacter pylori 35A] Length = 577 Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 132/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +I+G + + + E R ++ D LEE I Sbjct: 532 ERLALIIGKQTLESKEFECIKRANLEKQTLKDTELEEKI 570 >gi|188527045|ref|YP_001909732.1| prolyl-tRNA synthetase [Helicobacter pylori Shi470] gi|226701297|sp|B2US70|SYP_HELPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|188143285|gb|ACD47702.1| prolyl-tRNA synthetase [Helicobacter pylori Shi470] Length = 577 Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 132/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D LEE I Sbjct: 532 ERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKI 570 >gi|210134438|ref|YP_002300877.1| prolyl-tRNA synthetase [Helicobacter pylori P12] gi|226701295|sp|B6JKG9|SYP_HELP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|210132406|gb|ACJ07397.1| prolyl-tRNA synthetase [Helicobacter pylori P12] Length = 577 Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 132/224 (58%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y I LGL + A+SG IGG S EF+VL + GE T V C Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVC 224 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D+ LEE I Sbjct: 532 ERLALIVGKQTLESKEFECIKRANLEKQTIKDIELEEKI 570 >gi|308061592|gb|ADO03480.1| prolyl-tRNA synthetase [Helicobacter pylori Cuz20] Length = 577 Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 132/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIR---EDMSLEEVI 435 L +IVG + + + E R + +D LEE I Sbjct: 532 ERLALIVGKQTLESKEFECIKRANLEKRTLKDTELEEKI 570 >gi|296171596|ref|ZP_06852836.1| proline--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894051|gb|EFG73813.1| proline--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 582 Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 135/223 (60%), Gaps = 1/223 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I + G+YSWLPLG + L + I+REE Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYIRPVAPGLYSWLPLGLRVLRRIERIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 DAIGGQEILFPALLPRAPYETTNRWTEYGDGVFRLKDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPVLLYQIQNKYRDEARPRAGILRVREFLMKDSYSFDIDDAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 RIF+RL ++ + + A SG +GG S EF+ + GE T V C Sbjct: 184 QRIFNRLRVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRC 226 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/155 (39%), Positives = 87/155 (56%), Gaps = 2/155 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 VSARGIEV HIF G KY+ +A G DGK + MGSYG+G R+VA + E HD Sbjct: 416 VSARGIEVAHIFQLGRKYTDAFAADVLGEDGKPVRLTMGSYGLGVSRMVAVIAEQHHDEL 475 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP SVAPF + L+ I D R + L ++G +V DD G +F A+ Sbjct: 476 GLRWPSSVAPFDVHLV-IANKDAEARTGATGLATDLDRLGVEVLLDDRQASPGVKFKDAE 534 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LLG P ++VG + ++ VE++ R G ++++ Sbjct: 535 LLGVPWILVVGRGW-ANGVVELRDRFGGQTRELAV 568 >gi|297664845|ref|XP_002810834.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Pongo abelii] Length = 436 Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 91/209 (43%), Positives = 134/209 (64%), Gaps = 1/209 (0%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 LQ+ D S +LML+ G+I+ S G Y LP +A++ + +I +E G +++ Sbjct: 59 LQDKSDDLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVN 118 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK-SYRNLP 129 +P+L A+LW + R+D GKE+LRL DR+ K GPTHEE +T + S K SY+ LP Sbjct: 119 MPSLNPAELWQATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAITALIASQKKLSYKQLP 178 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F+RLG Sbjct: 179 FLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNRLG 238 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGE 218 L + ++A+ G IGG +SHEF + D GE Sbjct: 239 LPFVKVQADVGTIGGTVSHEFQLPVDIGE 267 >gi|15644866|ref|NP_207036.1| prolyl-tRNA synthetase [Helicobacter pylori 26695] gi|2501038|sp|P56124|SYP_HELPY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|2313329|gb|AAD07305.1| prolyl-tRNA synthetase (proS) [Helicobacter pylori 26695] Length = 577 Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 132/224 (58%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y I LGL + A+SG IGG S EF+VL + GE T V C Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVC 224 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 85/159 (53%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +I+G + + + E R ++ D+ LEE I Sbjct: 532 ERLALIIGKQTLESKEFECIKRANLEKQTIKDIELEEKI 570 >gi|308184043|ref|YP_003928176.1| prolyl-tRNA synthetase [Helicobacter pylori SJM180] gi|308059963|gb|ADO01859.1| prolyl-tRNA synthetase [Helicobacter pylori SJM180] Length = 577 Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 100/225 (44%), Positives = 132/225 (58%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 Y I LGL + A+SG IGG S EF+VL + GE T V C Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCQ 225 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDTLLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +I+G + + + + E R ++ D+ LEE I Sbjct: 532 ERLALIIGKQTLENKEFECIKRANLEKQTIKDIELEEKI 570 >gi|208434185|ref|YP_002265851.1| prolyl-tRNA synthetase [Helicobacter pylori G27] gi|226701296|sp|B5ZA05|SYP_HELPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|208432114|gb|ACI26985.1| prolyl-tRNA synthetase [Helicobacter pylori G27] Length = 577 Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 132/224 (58%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y I LGL + A+SG IGG S EF+VL + GE T V C Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVC 224 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D LEE I Sbjct: 532 ERLALIVGKQALESKEFECIKRANLEKQTLKDTELEEKI 570 >gi|308182413|ref|YP_003926540.1| prolyl-tRNA synthetase [Helicobacter pylori PeCan4] gi|308064598|gb|ADO06490.1| prolyl-tRNA synthetase [Helicobacter pylori PeCan4] Length = 577 Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 132/224 (58%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y I LGL + A+SG IGG S EF+VL + GE T V C Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVC 224 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D+ LEE I Sbjct: 532 ERLALIVGKQTLESKEFECIKRANLEKQTIKDIELEEKI 570 >gi|307636931|gb|ADN79381.1| prolyl tRNA synthetase [Helicobacter pylori 908] gi|325995521|gb|ADZ50926.1| Prolyl-tRNA synthetase [Helicobacter pylori 2018] gi|325997119|gb|ADZ49327.1| Prolyl-tRNA synthetase [Helicobacter pylori 2017] Length = 577 Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 132/224 (58%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDTESLDKEFLNTQNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y I LGL + A+SG IGG S EF+VL + GE T V C Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVC 224 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G DV DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGVDVLLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +I+G + + + E R ++ D+ LEE I Sbjct: 532 ERLALIIGKQTLESKEFECIKRANLEKQTIKDIELEEKI 570 >gi|317179366|dbj|BAJ57154.1| prolyl-tRNA synthetase [Helicobacter pylori F30] Length = 577 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 131/226 (57%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWERSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKN 226 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLT---GIREDMSLEEVI 435 L +IVG + + + E R + +D LEE I Sbjct: 532 ERLVLIVGKQTLESKEFECIKRANLEKQVLKDTELEEKI 570 >gi|329947841|ref|ZP_08294773.1| proline--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] gi|328523465|gb|EGF50563.1| proline--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] Length = 619 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 90/217 (41%), Positives = 134/217 (61%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASH+L++R I + + G+Y+WLPLG + L + AI+R+ Sbjct: 12 RLSTSFIRTLREDPADAEVASHRLLVRACYIRRAAPGVYTWLPLGLRTLRKIEAIVRQGM 71 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L ++ + +GR++ YG + +L DR D + PTHEE+ T + Sbjct: 72 DAMGGQEVHFPALLPSEPYQATGRWNDYGPTLFKLHDRKDGDYLLAPTHEEMFTLAVKDL 131 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G +Y +Y Sbjct: 132 YSSYKDLPAIVYQIQTKYRDEARPRAGIIRGREFVMKDSYSFDIDDAGLAAAYQAHRDAY 191 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 RIF RLGL + + A +G +GG S EF+ + GE Sbjct: 192 ERIFARLGLDYVIVNAMAGAMGGSHSEEFLYPCEIGE 228 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 88/149 (59%), Gaps = 2/149 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KYS + T +GK V MGSYGIG RV+AA+ E++HD KG+ Sbjct: 446 ARGIEIGHIFELGRKYSQALGLTVLDENGKARVVTMGSYGIGVSRVMAALAEANHDDKGL 505 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 WP +AP+ + ++ DQ D E++ + L G +V +DD + G +FA A+L Sbjct: 506 SWPVQIAPYHVQVL-ATGKDQAVFDVAEQVASALDADGVEVLYDDRRKVSAGVKFADAEL 564 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 LG P ++VG + VEI+ R TG R Sbjct: 565 LGLPYTLVVGRDLAKEGTVEIRDRRTGDR 593 >gi|298736816|ref|YP_003729346.1| prolyl-tRNA synthetase [Helicobacter pylori B8] gi|298356010|emb|CBI66882.1| prolyl-tRNA synthetase [Helicobacter pylori B8] Length = 577 Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 97/226 (42%), Positives = 132/226 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR + + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKNNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSKEFVVLTECGEDTIVVCKN 226 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + + E R ++ D+ LEE I Sbjct: 532 ERLALIVGKQTLENKEFECVKRANLEKQTIKDIELEEKI 570 >gi|207108695|ref|ZP_03242857.1| prolyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1] Length = 254 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 132/224 (58%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y I LGL + A+SG IGG S EF+VL + GE T V C Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSKEFVVLTECGEDTIVVC 224 >gi|257413581|ref|ZP_04743496.2| proline--tRNA ligase [Roseburia intestinalis L1-82] gi|257203071|gb|EEV01356.1| proline--tRNA ligase [Roseburia intestinalis L1-82] Length = 241 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 102/231 (44%), Positives = 140/231 (60%), Gaps = 5/231 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYS-WLPLGQKALDNVNAIIRE 59 M+ K +E P D I SH LM++ G + + GIYS +LPL ++ + I+RE Sbjct: 9 MKLEKLIGERFRERPADCVIDSHALMVKGGYMKYMANGIYSSYLPL-KRITCKIEQILRE 67 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E ++ E+S P + A LW ESGRY+S G+E+LR DRN+ M+ G THEE + R Sbjct: 68 EMDKLDGQEVSFPVVMPASLWEESGRYESVGEELLRFTDRNNAKMVLGMTHEEAAVHLVR 127 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 + KSY PF YQIQ KFRDE RPR G++R REF MKDAYSF + E Y K Sbjct: 128 EYAKSYNKYPFMIYQIQTKFRDEARPRAGLIRVREFTMKDAYSFHTSQEDLNQYYEKCHK 187 Query: 180 SYLRIFHRLGL-KSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK-DF 227 +Y RIF R G+ + + + ++SG +GG LSHEF++L GE + V C++ DF Sbjct: 188 AYERIFERAGIPEVVSVASDSGMMGGSLSHEFMLLTPVGEDSIVLCNECDF 238 >gi|330836102|ref|YP_004410743.1| Prolyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] gi|329748005|gb|AEC01361.1| Prolyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] Length = 586 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 92/224 (41%), Positives = 136/224 (60%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F L+E P A+ ++L+LR G I Q GI++ LPLG +++ + +IIR+E Sbjct: 1 MRMSALFSKTLREAPSGADAKGYELLLRAGFIRQLGAGIFTMLPLGYRSVKKIESIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P + AD+W +GRY S KEM R DR + M+ THEE +TD+ + Sbjct: 61 MDAIGGQEILMPVVNPADIWKSTGRYYSIDKEMSRFQDRVGRDMVLAMTHEEAVTDVAKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q K+RD+ RPR G++R REF MKD+YSFD G + Y + + Sbjct: 121 EIDSYKRLPQLVYQLQTKWRDDPRPRAGLIRVREFTMKDSYSFDRDQAGMEKQYRAHYSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y RIF GL + ++SG +GG ++HE++ L+ GE T + C Sbjct: 181 YFRIFGHAGLPVTVVGSDSGMMGGKIAHEYMYLSPVGEDTIITC 224 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 91/143 (63%), Gaps = 4/143 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++G+EVG+IF GT+YS M ++ DG V MGSYGIG R++A + E HD G+ Sbjct: 409 SKGVEVGNIFQLGTRYSEAMGCLYQDEDGVRKPVIMGSYGIGVGRMLACLAEEYHDDSGL 468 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 P +VAP+++ L+++ +QV + IY RL+ G +V +DD E G +FA ADLL Sbjct: 469 ALPVTVAPYQVHLVSLVKDEQV----GDTIYGRLTHAGIEVLYDDRKESAGVKFADADLL 524 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P+++ VG++ + + KVE+K R Sbjct: 525 GMPIRITVGNRSLKEGKVEVKLR 547 >gi|302525268|ref|ZP_07277610.1| prolyl-tRNA synthetase [Streptomyces sp. AA4] gi|302434163|gb|EFL05979.1| prolyl-tRNA synthetase [Streptomyces sp. AA4] Length = 578 Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 94/215 (43%), Positives = 135/215 (62%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+E+P DAE+ SH+L++R G + + + G YSWLPLG + L V ++REE N Sbjct: 2 SSLFLRTLREDPADAEVPSHRLLVRAGYVRRVAPGGYSWLPLGLRVLRRVEEVVREEMNA 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA E+ P L + + + R+ YG + RL DR + GPTHEE+ + Sbjct: 62 IGAQEIQFPALLPREPYEATNRWTEYGDNLFRLKDRKGADYLLGPTHEELFALTVKGEYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFDL EG + SY +Y++ Sbjct: 122 SYKDFPVTLYQIQTKYRDEARPRAGILRGREFVMKDSYSFDLDDEGLERSYQAHRDAYIK 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 +F RLG++ + + A SG +GG S EF+ +A+ GE Sbjct: 182 LFDRLGIEYVIVAATSGAMGGSASEEFLAVAENGE 216 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 100/161 (62%), Gaps = 2/161 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V+ARGIE+GHIF G KY+ G D K + MGSYG+G R+VA + E +HD + Sbjct: 413 VAARGIEIGHIFQLGRKYTDAFEVDALGPDSKPVRITMGSYGVGVSRLVAVLAEQNHDEQ 472 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G++WP V+PF + ++ I D+ R+ EK+ A L G ++ DD G +FA A+ Sbjct: 473 GLVWPREVSPFDVHVV-IAGKDETVREGAEKLAAELDAAGLEIILDDRKATPGVKFADAE 531 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 L+G P ++VG + +++ VE+K R TG RE+++++ V+++ Sbjct: 532 LVGVPTILVVG-RGLANGLVEVKDRRTGEREEIAVDSVVDH 571 >gi|154486903|ref|ZP_02028310.1| hypothetical protein BIFADO_00736 [Bifidobacterium adolescentis L2-32] gi|154084766|gb|EDN83811.1| hypothetical protein BIFADO_00736 [Bifidobacterium adolescentis L2-32] Length = 611 Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 102/263 (38%), Positives = 149/263 (56%), Gaps = 2/263 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 5 LRMSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLNVLNKIENIIREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 65 MASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y + Sbjct: 125 LYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF+RL LK +P+ A +GP+GG S EF+ + GE S + + + T Sbjct: 185 YERIFNRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEP 244 Query: 241 DIISLNSI--VEQWTAPYAATSD 261 + I + E+ P AAT D Sbjct: 245 EAIDFTATPAAEKRPTPDAATID 267 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MGSYGIG RV+A + E+ HD KG+ Sbjct: 444 RGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMGSYGIGVSRVMACIAETHHDEKGLA 503 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP ++ ++ D +A E++ L G +V +DD + G +F A+L+ Sbjct: 504 WPAVIAPAQVHVVAT-GKDAAAFEAAEQLIGELEAKGIEVIFDDRKKVSPGVKFKDAELI 562 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P+ + G V++ +E++ R Sbjct: 563 GVPIIAVAGRDTVNNGTIEVRDR 585 >gi|237756770|ref|ZP_04585264.1| prolyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691073|gb|EEP60187.1| prolyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] Length = 162 Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 84/162 (51%), Positives = 114/162 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK+F+P L+ENP DA + SH ++R G I S GIY +LPLG + L + IIR+ Sbjct: 1 MLASKFFMPTLKENPSDAVVPSHIYLVRGGFIRSLSAGIYEYLPLGLRVLRKIENIIRKH 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +GA+E+ +P L A+LW E+GR+ YGKE+ RL DR D GPTHEE +TD+ R Sbjct: 61 MDDSGALEVLLPILTPAELWKETGRWYVYGKELFRLKDRKDAEFALGPTHEETITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 +++SY++LP FYQIQ KFRDE RPR+G++R REF+MKD YS Sbjct: 121 NVRSYKDLPLNFYQIQTKFRDEARPRYGLIRGREFIMKDGYS 162 >gi|229817161|ref|ZP_04447443.1| hypothetical protein BIFANG_02420 [Bifidobacterium angulatum DSM 20098] gi|229784950|gb|EEP21064.1| hypothetical protein BIFANG_02420 [Bifidobacterium angulatum DSM 20098] Length = 637 Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 93/218 (42%), Positives = 133/218 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R G + + + GI++WLPLG L+ + IIREE Sbjct: 36 LRMSTMFLRTLREDPADADVVSDKLLQRAGYLRKAAPGIWTWLPLGLNVLNKIENIIREE 95 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 96 MASINAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 155 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y + Sbjct: 156 LYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGA 215 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF RL L +P+ A +GP+GG S EF+ + GE Sbjct: 216 YERIFKRLDLDYVPVHAMAGPMGGFESEEFLAPMEIGE 253 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MGSYGIG RV+A + E+ HD +G+ Sbjct: 475 RGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMGSYGIGVSRVMACIAETHHDERGLA 534 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP ++ ++ D+ + E++ A L G +V +DD + G +F A+L+ Sbjct: 535 WPSCIAPAQVHVVAT-GKDEKAFEGAEQLIAELEAKGVEVIFDDRKKVSPGVKFKDAELI 593 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P +VG +V+D +EI+ R Sbjct: 594 GVPQIAVVGRDYVNDGTIEIRDR 616 >gi|217033470|ref|ZP_03438900.1| hypothetical protein HP9810_1g84 [Helicobacter pylori 98-10] gi|216944175|gb|EEC23603.1| hypothetical protein HP9810_1g84 [Helicobacter pylori 98-10] Length = 577 Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 97/226 (42%), Positives = 131/226 (57%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ L YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLSVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y I LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSKEFVVLTECGEDTIVVCKN 226 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 412 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 471 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFELIG 531 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +I+G + + + E R ++ D LEE I Sbjct: 532 ERLALIIGKQTLESKEFECIKRANLEKQTLKDTELEEKI 570 >gi|15835287|ref|NP_297046.1| prolyl-tRNA synthetase [Chlamydia muridarum Nigg] gi|270285461|ref|ZP_06194855.1| prolyl-tRNA synthetase [Chlamydia muridarum Nigg] gi|270289472|ref|ZP_06195774.1| prolyl-tRNA synthetase [Chlamydia muridarum Weiss] gi|301336858|ref|ZP_07225060.1| prolyl-tRNA synthetase [Chlamydia muridarum MopnTet14] gi|13633968|sp|Q9PK01|SYP_CHLMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|7190706|gb|AAF39493.1| prolyl-tRNA synthetase [Chlamydia muridarum Nigg] Length = 579 Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 94/229 (41%), Positives = 141/229 (61%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S F + ++A + S++L+ + G + + SKGIYS+ PL Q+ + + IIREE Sbjct: 1 MKTSLLFYRTSKNANKEASVLSYELLEKAGYLFKTSKGIYSYTPLFQRVILKMTEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P LQSA+LW ++GR++++ E L L DR +K M PTHEEV+++ Sbjct: 61 LNAIGGQEVCLPLLQSAELWQKTGRWEAFLSEKLLYVLKDRENKEMCLAPTHEEVVSEFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + + LP YQI KFRDE+RPRFG+MR++EFLM+D+Y+F +PE + Y K+ Sbjct: 121 SQWLTGRKQLPVHLYQIGTKFRDEIRPRFGLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++Y RIF RL LK + + A+ G IG S EF VL GE + S + Sbjct: 181 LAYQRIFDRLNLKYVIVTADGGKIGKGKSEEFHVLCSLGEDTICVSGSY 229 Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 5/174 (2%) Query: 269 DSLPENKRVSA---RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 D P+N +G+EV HIF GT+Y+ S F+ +G+ MG+YGIG R + Sbjct: 393 DLCPQNNEAPYEIFQGVEVAHIFNLGTRYTECFSVGFQDENGEKQLCWMGTYGIGVGRTL 452 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 AA IE D KGI+WP +VAPF I+++ D + Y L+ G + DD Sbjct: 453 AACIEQLADSKGIVWPLAVAPFSITIL-YNGGDTEGEAVASQFYQSLNTAGFEPLLDDRN 511 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 E++G + +DLLG P ++I+G F +EI+ R +G + ++S E ++++ S Sbjct: 512 ERLGFKLKDSDLLGIPYKLIIGKSFQKTGMLEIESR-SGEKYNISPENLLDWCS 564 >gi|291557497|emb|CBL34614.1| prolyl-tRNA synthetase, family II [Eubacterium siraeum V10Sc8a] Length = 574 Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 95/222 (42%), Positives = 130/222 (58%), Gaps = 1/222 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ K +E P D +I SH +M+R G I + GI+S ++ + IIREE Sbjct: 1 MKLDKLVGDRFKERPSDCQIDSHAIMVRGGYIKYMANGIFSSYTPTKRITKKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + A LW ESGRYDS G E+LR DRN M+ G THEE + R Sbjct: 61 MDKIDGQEVQFPVVMPASLWQESGRYDSIGSELLRFTDRNRMPMVLGMTHEEAAVHLVRE 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + KSY PF YQIQ KFRDE RPR G++R REF MKDAYSF + E + Y+K + Sbjct: 121 YGKSYTKYPFMIYQIQTKFRDEARPRGGLIRVREFTMKDAYSFHTSQEDLEQYYDKCHKA 180 Query: 181 YLRIFHRLGL-KSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R G+ + I ++++SG +GG +SHEF++L GE + Sbjct: 181 YENIFRRAGVPEVISVKSDSGMMGGSISHEFMLLTPVGEDTI 222 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 91/156 (58%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RGIEVG+IF GTKY+ M+ T+ ++G++ MG YGIG R+ A+V E+ HD G Sbjct: 402 SRGIEVGNIFQLGTKYTKTMNMTYLDSNGEEKTPIMGCYGIGVGRLAASVCEAHHDDYGP 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP +AP+++ + +++ D + +K+Y L G +V +DD G F+ ADLL Sbjct: 462 IWPMPIAPWQVHICAVRSDDADVKACADKLYNTLQNAGAEVIYDDRQVSAGVMFSDADLL 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL+V+V + + D+ EI R + +EE Sbjct: 522 GVPLRVVVSPRNLKDNCCEISARDKSFSYKVPVEET 557 >gi|284044947|ref|YP_003395287.1| prolyl-tRNA synthetase [Conexibacter woesei DSM 14684] gi|283949168|gb|ADB51912.1| prolyl-tRNA synthetase [Conexibacter woesei DSM 14684] Length = 560 Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 102/266 (38%), Positives = 149/266 (56%), Gaps = 11/266 (4%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S Y LP ++ P DAE SH+LM+R G+I Q G++++LP G + V IIREE Sbjct: 3 RLSSYLLPTEKQAPADAEAISHQLMVRAGLIRQLGAGLWTYLPAGWRVHRRVEQIIREEM 62 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM +P L A+ W +GR + E+ +L DR M+ THEE++T Sbjct: 63 DAIGGQEMLMPLLNPAEPWRRTGRIEI--DEIFKLEDRKGTEMVLAMTHEEIVTTHVAQV 120 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SYR+LP YQIQ+K RDE RPR GV+R+REF MKD+YSFD G + SY K V+Y Sbjct: 121 VRSYRDLPQILYQIQVKERDEPRPRAGVLRTREFRMKDSYSFDRDEAGLEESYAKHIVAY 180 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF R GL+ + ++ G +GG +HE++ GE +V + + + N + Sbjct: 181 DRIFERTGLEWYRVESDVGMMGGTAAHEYMAPCAAGEDEVALAPGY------AANL---E 231 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKL 267 + S + + AP + +VH L Sbjct: 232 VASADPQPAELPAPLSQPEEVHTPGL 257 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 60/153 (39%), Positives = 86/153 (56%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + IEVG+IF GT+YS + A+F G V MG YGIG R+VAA +E D GI Sbjct: 394 KAIEVGNIFKLGTRYSSALGASFLDESGAQQLVTMGCYGIGPARIVAAAVEQYADDAGIA 453 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP ++APF L+ I + R +++Y L G DV +DD G +FA A+LLG Sbjct: 454 WPRALAPFDAELVVISRGESEERAFADRLYEELKATGLDVLYDDRDAGPGEKFADAELLG 513 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 PL+V VG + ++ ++E++ R R + LE Sbjct: 514 APLRVTVGKRTLAAGELEVQLRRGRERRSVPLE 546 >gi|237802818|ref|YP_002888012.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] gi|237804740|ref|YP_002888894.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|231273040|emb|CAX09953.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|231274052|emb|CAX10846.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] Length = 581 Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 95/229 (41%), Positives = 139/229 (60%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F + ++A + S++L+ + G + + SKGIYS+ PL Q+ + + IIREE Sbjct: 1 MRTSLLFYRTSKNANKEASVLSYELLQKAGYLFKTSKGIYSYTPLFQRVILKMTEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P LQ A+LW ++GR+ ++ E L L DR +KAM PTHEEV+++ Sbjct: 61 LNAIGGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKDRENKAMCLAPTHEEVVSEFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + LP YQI KFRDE+RPRFG+MR++EFLM+D+Y+F +PE + Y K+ Sbjct: 121 AQWLTGREQLPIHLYQIGTKFRDEIRPRFGLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++Y RIF RL LK + + A+ G IG S EF VL GE + S + Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFHVLCSLGEDTICVSGSY 229 Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 5/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA---RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P A D + D P+N +G+EV HIF GT+Y+ S F+ +G Sbjct: 379 PLPAFGDFLLAEAGDLCPQNGGAPYEIFQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQL 438 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 MG+YGIG R +AA IE D KG++WP +V PF I+++ D ++Y Sbjct: 439 CWMGTYGIGVGRTLAACIEQLADNKGLVWPLAVTPFSITIL-YNGGDTEGEATALQLYQS 497 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G + DD E++G + +DLLG P ++I+G F S +EI+ R +G + ++S Sbjct: 498 LNTEGFEPLLDDRNERLGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIESR-SGEKCNVSP 556 Query: 432 EEVINYASHRF 442 E ++++ S Sbjct: 557 ENLLDWCSKNL 567 >gi|166154604|ref|YP_001654722.1| prolyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|166155479|ref|YP_001653734.1| prolyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335871|ref|ZP_07224115.1| prolyl-tRNA synthetase [Chlamydia trachomatis L2tet1] gi|226699129|sp|B0B7W3|SYP_CHLT2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226699130|sp|B0BC28|SYP_CHLTB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|165930592|emb|CAP04089.1| prolyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|165931467|emb|CAP07043.1| prolyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 581 Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 95/229 (41%), Positives = 139/229 (60%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F + ++A + S++L+ + G + + SKGIYS+ PL Q+ + + IIREE Sbjct: 1 MRTSLLFYRTSKNANKEASVLSYELLQKAGYLFKTSKGIYSYTPLFQRVILKMTEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P LQ A+LW ++GR+ ++ E L L DR +KAM PTHEEV+++ Sbjct: 61 LNAIGGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKDRENKAMCLAPTHEEVVSEFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + LP YQI KFRDE+RPRFG+MR++EFLM+D+Y+F +PE + Y K+ Sbjct: 121 AQWLTGREQLPIHLYQIGTKFRDEIRPRFGLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++Y RIF RL LK + + A+ G IG S EF VL GE + S + Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFHVLCSLGEDTICVSGSY 229 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 5/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA---RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P A D + D P+N +G+EV HIF GT+Y+ S F+ +G Sbjct: 379 PLPAFGDFLLAEAGDLCPQNGGAPYEIFQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQL 438 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 MG+YGIG R +AA IE D KG++WP +VAPF I+++ D ++Y Sbjct: 439 CWMGTYGIGVGRTLAACIEQLADNKGLVWPLAVAPFSITIL-YNGGDTEGEATALQLYQS 497 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G + DD E++G + +DLLG P ++I+G F S +EI+ R +G + ++S Sbjct: 498 LNTEGFEPLLDDRNERLGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIESR-SGEKCNVSP 556 Query: 432 EEVINYASHRF 442 E ++++ S Sbjct: 557 ENLLDWCSKNL 567 >gi|296436840|gb|ADH19010.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/11222] Length = 581 Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 95/229 (41%), Positives = 139/229 (60%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F + ++A + S++L+ + G + + SKGIYS+ PL Q+ + + IIREE Sbjct: 1 MRTSLLFYRTSKNANKEASVLSYELLQKAGYLFKTSKGIYSYTPLFQRVILKMTEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P LQ A+LW ++GR+ ++ E L L DR +KAM PTHEEV+++ Sbjct: 61 LNAIGGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKDRENKAMCLAPTHEEVVSEFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + LP YQI KFRDE+RPRFG+MR++EFLM+D+Y+F +PE + Y K+ Sbjct: 121 AQWLTGREQLPIHLYQIGTKFRDEIRPRFGLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++Y RIF RL LK + + A+ G IG S EF VL GE + S + Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFHVLCSLGEDTICVSGSY 229 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 5/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA---RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P A D + D P+N +G+EV HIF GT+Y+ S F+ +G Sbjct: 379 PLPAFGDFLLAEAGDLCPQNGGAPYEIFQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQL 438 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 MG+YGIG R +AA IE D KG++WP +VAPF I+++ D ++Y Sbjct: 439 CWMGTYGIGVGRTLAACIEQLADNKGLVWPLAVAPFSITIL-YNGGDTEGEATALQLYQS 497 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G + +D E++G + +DLLG P ++I+G F S +EI+ R +G + ++S Sbjct: 498 LNTEGFEPLLNDRNERLGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIESR-SGEKCNVSP 556 Query: 432 EEVINYASHRF 442 E ++++ S Sbjct: 557 ENLLDWCSKNL 567 >gi|296435914|gb|ADH18088.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/9768] gi|296437774|gb|ADH19935.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/11074] gi|297140274|gb|ADH97032.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/9301] Length = 581 Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 95/229 (41%), Positives = 139/229 (60%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F + ++A + S++L+ + G + + SKGIYS+ PL Q+ + + IIREE Sbjct: 1 MRTSLLFYRTSKNANKEASVLSYELLQKAGYLFKTSKGIYSYTPLFQRVILKMTEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P LQ A+LW ++GR+ ++ E L L DR +KAM PTHEEV+++ Sbjct: 61 LNAIGGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKDRENKAMCLAPTHEEVVSEFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + LP YQI KFRDE+RPRFG+MR++EFLM+D+Y+F +PE + Y K+ Sbjct: 121 AQWLTGREQLPIHLYQIGTKFRDEIRPRFGLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++Y RIF RL LK + + A+ G IG S EF VL GE + S + Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFHVLCSLGEDTICVSGSY 229 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 5/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA---RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P A D + D P+N +G+EV HIF GT+Y+ S F+ +G Sbjct: 379 PLPAFGDFLLAEAGDLCPQNGGAPYEIFQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQL 438 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 MG+YGIG R +AA IE D KG++WP +VAPF I+++ D ++Y Sbjct: 439 CWMGTYGIGVGRTLAACIEQLADNKGLVWPLAVAPFSITIL-YNGGDTEGEATALQLYQS 497 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G + DD E++G + +DLLG P ++I+G F S +EI+ R +G + ++S Sbjct: 498 LNTEGFEPLLDDRNERLGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIESR-SGEKCNVSP 556 Query: 432 EEVINYASHRF 442 E ++++ S Sbjct: 557 ENLLDWCSKNL 567 >gi|109947885|ref|YP_665113.1| prolyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba] gi|123173273|sp|Q17W62|SYP_HELAH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|109715106|emb|CAK00114.1| proS [Helicobacter acinonychis str. Sheeba] Length = 577 Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 98/225 (43%), Positives = 132/225 (58%), Gaps = 1/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQIGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKGNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 Y I + LGL + A++G IGG S EF+VL + GE T V C Sbjct: 181 YKEILNDLGLDFRIVEADNGAIGGSKSKEFVVLTECGEDTIVVCQ 225 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 5/181 (2%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P +R + +EVGHIF Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIIQVKESDCCPNCQRALKYHKSLEVGHIFKLSQGYAKSLKASFLDKNGKEQFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+V + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNLKDEVQKKLAFEVYERLLQRGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEV 434 DV DD + G++ +L+G L +IVG + + + + E R ++ D LEE Sbjct: 510 DVLLDDRDVRFGAKMRDFELIGERLALIVGKQTLENKEFECIKRANLEKQTLKDRELEEK 569 Query: 435 I 435 I Sbjct: 570 I 570 >gi|76789124|ref|YP_328210.1| prolyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|114152182|sp|Q3KLW0|SYP_CHLTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|76167654|gb|AAX50662.1| prolyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] Length = 581 Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 95/229 (41%), Positives = 139/229 (60%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F + ++A + S++L+ + G + + SKGIYS+ PL Q+ + + IIREE Sbjct: 1 MRTSLLFYRTSKNANKEASVLSYELLQKAGYLFKTSKGIYSYTPLFQRVILKMTEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P LQ A+LW ++GR+ ++ E L L DR +KAM PTHEEV+++ Sbjct: 61 LNAIGGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKDRENKAMCLAPTHEEVVSEFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + LP YQI KFRDE+RPRFG+MR++EFLM+D+Y+F +PE + Y K+ Sbjct: 121 AQWLTGREQLPIHLYQIGTKFRDEIRPRFGLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++Y RIF RL LK + + A+ G IG S EF VL GE + S + Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFHVLCSLGEDTICVSGSY 229 Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 5/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA---RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P A D + D P+N +G+EV HIF GT+Y+ S F+ +G Sbjct: 379 PLPAFGDFLLAEAGDLCPQNGGAPYEIFQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQL 438 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 MG+YGIG R +AA IE D KG++WP +V PF I+++ D ++Y Sbjct: 439 CWMGTYGIGVGRTLAACIEQLADNKGLVWPLAVTPFSITIL-YNGGDTEGEATALQLYQS 497 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G + DD E++G + +DLLG P ++I+G F S +EI+ R +G + ++S Sbjct: 498 LNTEGFEPLLDDRNERLGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIESR-SGEKCNVSP 556 Query: 432 EEVINYASHRF 442 E ++++ S Sbjct: 557 ENLLDWCSKNL 567 >gi|255311199|ref|ZP_05353769.1| prolyl-tRNA synthetase [Chlamydia trachomatis 6276] gi|255317500|ref|ZP_05358746.1| prolyl-tRNA synthetase [Chlamydia trachomatis 6276s] Length = 581 Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 95/229 (41%), Positives = 139/229 (60%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F + ++A + S++L+ + G + + SKGIYS+ PL Q+ + + IIREE Sbjct: 1 MRTSLLFYRTSKNANKEASVLSYELLQKAGYLFKTSKGIYSYTPLFQRVILKMTEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P LQ A+LW ++GR+ ++ E L L DR +KAM PTHEEV+++ Sbjct: 61 LNAIGGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKDRENKAMCLAPTHEEVVSEFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + LP YQI KFRDE+RPRFG+MR++EFLM+D+Y+F +PE + Y K+ Sbjct: 121 AQWLTGREQLPIHLYQIGTKFRDEIRPRFGLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++Y RIF RL LK + + A+ G IG S EF VL GE + S + Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFHVLCSLGEDTICVSGSY 229 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 5/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA---RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P A D + D P+N +G+EV HIF GT+Y+ S F+ +G Sbjct: 379 PLPAFGDFLLAEAGDLCPQNGGAPYEIFQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQL 438 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 MG+YGIG R +AA IE D KG++WP +VAPF I+++ D ++Y Sbjct: 439 CWMGTYGIGVGRTLAACIEQLADNKGLVWPLAVAPFSITIL-YNGGDTEGEATALQLYQS 497 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G + DD E++G + +DLLG P ++I+G F S +EI+ R +G + ++S Sbjct: 498 LNTEGFEPLLDDRNERLGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIESR-SGEKCNVSP 556 Query: 432 EEVINYASHRF 442 E ++++ S Sbjct: 557 ENLLDWCSKNL 567 >gi|15605118|ref|NP_219903.1| prolyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX] gi|6686306|sp|P36431|SYP_CHLTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|3328819|gb|AAC67990.1| Prolyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX] gi|297748523|gb|ADI51069.1| Prolyl-tRNA synthetase [Chlamydia trachomatis D-EC] gi|297749403|gb|ADI52081.1| Prolyl-tRNA synthetase [Chlamydia trachomatis D-LC] Length = 581 Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 95/229 (41%), Positives = 139/229 (60%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F + ++A + S++L+ + G + + SKGIYS+ PL Q+ + + IIREE Sbjct: 1 MRMSLLFYRTSKNANKEASVLSYELLQKAGYLFKTSKGIYSYTPLFQRVILKMTEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P LQ A+LW ++GR+ ++ E L L DR +KAM PTHEEV+++ Sbjct: 61 LNAIGGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKDRENKAMCLAPTHEEVVSEFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + LP YQI KFRDE+RPRFG+MR++EFLM+D+Y+F +PE + Y K+ Sbjct: 121 AQWLTGREQLPIHLYQIGTKFRDEIRPRFGLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++Y RIF RL LK + + A+ G IG S EF VL GE + S + Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFHVLCSLGEDTICVSGSY 229 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 5/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA---RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P A D + D P+N +G+EV HIF GT+Y+ S F+ +G Sbjct: 379 PLPAFGDFLLAEAGDLCPQNGGAPYEIFQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQL 438 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 MG+YGIG R +AA IE D KG++WP +VAPF I+++ D ++Y Sbjct: 439 CWMGTYGIGVGRTLAACIEQLADNKGLVWPLAVAPFSITIL-YNGGDTEGEATALQLYQS 497 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G + DD E++G + +DLLG P ++I+G F S +EI+ R +G + ++S Sbjct: 498 LNTEGFEPLLDDRNERLGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIESR-SGEKCNVSP 556 Query: 432 EEVINYASHRF 442 E ++++ S Sbjct: 557 ENLLDWCSKNL 567 >gi|225350874|ref|ZP_03741897.1| hypothetical protein BIFPSEUDO_02448 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158330|gb|EEG71572.1| hypothetical protein BIFPSEUDO_02448 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 611 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 93/218 (42%), Positives = 134/218 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 5 LRMSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLNVLNKIENIIREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 65 MASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y + Sbjct: 125 LYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF+RL LK +P+ A +GP+GG S EF+ + GE Sbjct: 185 YERIFNRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGE 222 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MGSYGIG RV+A + E+ HD KG+ Sbjct: 444 RGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMGSYGIGVSRVMACIAETHHDEKGLA 503 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP ++ ++ D +A E++ A L G +V +DD + G +F A+L+ Sbjct: 504 WPAIIAPAQVHVV-ATGKDAAAFEAAEQLIADLEAKGIEVIFDDRKKVSPGVKFKDAELI 562 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL + G V++ +E++ R Sbjct: 563 GVPLIAVAGRDTVNNGTIEVRDR 585 >gi|212716449|ref|ZP_03324577.1| hypothetical protein BIFCAT_01373 [Bifidobacterium catenulatum DSM 16992] gi|212660702|gb|EEB21277.1| hypothetical protein BIFCAT_01373 [Bifidobacterium catenulatum DSM 16992] Length = 611 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 93/218 (42%), Positives = 134/218 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 5 LRMSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLNVLNKIENIIREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 65 MASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y + Sbjct: 125 LYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 Y RIF+RL LK +P+ A +GP+GG S EF+ + GE Sbjct: 185 YERIFNRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGE 222 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MGSYGIG RV+A + E+ HD KG+ Sbjct: 444 RGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMGSYGIGVSRVMACIAETHHDEKGLA 503 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP ++ ++ D +A E++ A L G +V +DD + G +F A+L+ Sbjct: 504 WPAIIAPAQVHVV-ATGKDAAAFEAAERLIAELEAKGIEVIFDDRKKVSPGVKFKDAELI 562 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL + G V++ +E++ R Sbjct: 563 GVPLIAVAGRDTVNNGTIEVRDR 585 >gi|300123658|emb|CBK24930.2| unnamed protein product [Blastocystis hominis] Length = 457 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 118/395 (29%), Positives = 198/395 (50%), Gaps = 40/395 (10%) Query: 39 IYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD 98 +YS+LPLGQ+ LD V II GA +M +P +Q+ + W++SGR D GKE+ L D Sbjct: 1 MYSFLPLGQRVLDEVEKIIDRNLETIGAQKMQMPIVQNLNRWMKSGRRDQIGKELYTLKD 60 Query: 99 RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMK 158 R + + PT+EEV+T++ + + + N P YQ KFRDE+R + GV+RS+EFLM Sbjct: 61 RKGQELCLSPTNEEVITELVKDLVATPSNYPLMLYQTSPKFRDEMRLKAGVLRSKEFLMM 120 Query: 159 DAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 D YSFD + + +++++ + IF L + + A++G +GG S E+ GE Sbjct: 121 DLYSFDTNLKKANETFDQVDTCFSNIFRELEIPVEALEADNGIMGGSRSKEYQCCCGVGE 180 Query: 219 TQVF-CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 +V CSK + + S+ ++++ + S+ N+ LF Sbjct: 181 DRVTRCSK-------CGYKSLYTSSTSIPTVIDYF------FSETFNQLLFQ-------- 219 Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + +E+GH F G +YS + +G+ +QMG YG+G R+V ++ E G Sbjct: 220 --QSLELGHSFVLGDRYSTLFNLQNRGSP-----LQMGCYGLGVSRIVGSLFELFGHSSG 272 Query: 338 IIWPDSVAPFKISLINIKA------HDQVCRDACEKIYARLSKVG--CDVFWDDMGE-QI 388 I++PD + F + ++N + A K L +G + +DD E Sbjct: 273 ILFPDPITTFDVVVLNTGTPIDRVFESEKTEAARAKTAELLDALGDALRICFDDRDELSA 332 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIK--HR 421 G++ A+L+G + VI G +F +E++ HR Sbjct: 333 GNRLMDAELMGARVAVIAGKEFAMGGNLEVRLLHR 367 >gi|306823404|ref|ZP_07456779.1| proline--tRNA ligase [Bifidobacterium dentium ATCC 27679] gi|309802595|ref|ZP_07696699.1| proline--tRNA ligase [Bifidobacterium dentium JCVIHMP022] gi|304553111|gb|EFM41023.1| proline--tRNA ligase [Bifidobacterium dentium ATCC 27679] gi|308220659|gb|EFO76967.1| proline--tRNA ligase [Bifidobacterium dentium JCVIHMP022] Length = 611 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 102/263 (38%), Positives = 147/263 (55%), Gaps = 2/263 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 5 LRMSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLTVLNKIENIIREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 65 MASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y + Sbjct: 125 LYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RL LK +P+ A +GP+GG S EF+ + GE S + + + T Sbjct: 185 YERIFDRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEP 244 Query: 241 DIISLNSI--VEQWTAPYAATSD 261 + I E+ P AAT D Sbjct: 245 EAIDCTDTPAAEKRPTPDAATID 267 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MGSYGIG RV+A + E+ HD KG+ Sbjct: 444 RGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMGSYGIGVSRVMACIAETHHDDKGLA 503 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP ++ ++ D +A E++ A L G +V +DD + G +F A+L+ Sbjct: 504 WPAVIAPAQVHVVAT-GKDAAAFEAAEQLIAELEAKGIEVIFDDRKKVSPGVKFKDAELI 562 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL + G V++ +E++ R Sbjct: 563 GVPLIAVAGRDTVNNGTIEVRDR 585 >gi|171741061|ref|ZP_02916868.1| hypothetical protein BIFDEN_00127 [Bifidobacterium dentium ATCC 27678] gi|171276675|gb|EDT44336.1| hypothetical protein BIFDEN_00127 [Bifidobacterium dentium ATCC 27678] Length = 611 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 102/263 (38%), Positives = 147/263 (55%), Gaps = 2/263 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +R S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 5 LRMSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLTVLNKIENIIREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 65 MASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKD 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y + Sbjct: 125 LYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RL LK +P+ A +GP+GG S EF+ + GE S + + + T Sbjct: 185 YERIFDRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEP 244 Query: 241 DIISLNSI--VEQWTAPYAATSD 261 + I E+ P AAT D Sbjct: 245 EAIDCTDTPAAEKRPTPDAATID 267 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MGSYGIG RV+A + E+ HD KG+ Sbjct: 444 RGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMGSYGIGVSRVMACIAETHHDDKGLA 503 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP ++ ++ D +A E++ A L G +V +DD + G +F A+L+ Sbjct: 504 WPAVIAPAQVHVVAT-GKDAAAFEAAEQLIAELEAKGIEVIFDDRKKVSPGVKFKDAELI 562 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL + G V++ +E++ R Sbjct: 563 GVPLIAVAGRDTVNNGTIEVRDR 585 >gi|291299271|ref|YP_003510549.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] gi|290568491|gb|ADD41456.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] Length = 562 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 138/222 (62%), Gaps = 1/222 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S + P L++ P +AE SH+ ++R G I Q + G YS LPL + + A+IREE Sbjct: 1 MRWSTLYAPTLRDFPAEAEAPSHQRLVRAGFIRQLAAGHYSLLPLAIRVRAKIMAVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E +P + A++W SGR+D G EM RL DR + G THEE+ T I + Sbjct: 61 LDRIGAQEFLLPAMHPAEIWHASGRWDVMGSEMFRLKDRKGAQLALGMTHEEIFTSIA-T 119 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +YQ Q KFRDE RP+ G++R REF MKD+YSFDL G +++K + Sbjct: 120 ELNSYKQLPQIWYQFQTKFRDEPRPKGGLLRVREFTMKDSYSFDLDAAGLDAAFDKHRGA 179 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 YLRIF RLG+ +IP+ A SG +GG S EF+ A +GE V Sbjct: 180 YLRIFERLGIPAIPVDASSGTMGGSGSTEFMSPAPSGEDLVM 221 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 2/154 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R IEVGHIF GTKYS + A A+GK V MGSYGIG R +AA++E+ HD GI Sbjct: 400 RTIEVGHIFKLGTKYSEVLDAKVLDANGKAVPVVMGSYGIGVERAIAAIVEAHHDEAGIK 459 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP +VAP+ ++++ + D R A E +Y +LS DV DD + G++ +L+G Sbjct: 460 WPVNVAPYTVAVVMMSTKDDEVRQAAENLYRQLSD--TDVILDDRDARPGAKLTDVELVG 517 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 P +V VG++ + VEI R TG E + + E Sbjct: 518 IPFRVTVGARGLKTGSVEITSRATGETETVPVAE 551 >gi|66819305|ref|XP_643312.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4] gi|60471379|gb|EAL69339.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 674 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 93/223 (41%), Positives = 139/223 (62%), Gaps = 2/223 (0%) Query: 3 RSKYFLPILQENPRDAE-IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 RS F+P + ++ + S LM + G+I + S G YS LPL QK ++N+ II EE Sbjct: 52 RSNLFIPFQNDQKIGSDMLESQLLMQKGGLIRRLSAGTYSTLPLAQKVMENIIKIIDEEM 111 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G +MS+P + +LW ++GR+DS G ++++L DR + PTHEEV+T I + Sbjct: 112 EKVGGQKMSMPKMLPRELWEKTGRWDSAGDDLIKLKDRKGEEYCLAPTHEEVITTIVANE 171 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 S + P YQI K+RDE+RPRFG++R REF MKD YSFD + E ++ +Y ++ +Y Sbjct: 172 SLSNSSFPIKLYQIGEKYRDEVRPRFGLLRGREFTMKDMYSFDTSKEAAEITYYQVKQAY 231 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 I RL L + A+SG IGG++SHEF VLA+ GE + ++C Sbjct: 232 HNILERLELPYACVEADSGNIGGNMSHEFQVLANVGEDSLIYC 274 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 93/181 (51%), Gaps = 17/181 (9%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES-SHDGK 336 + RGIEVGHIFY GTKYS + A + GA + ++MG +GIG R++A ++E+ S + Sbjct: 496 TKRGIEVGHIFYLGTKYSSKLGAYYTGAAQQRIPLEMGCFGIGVSRLLATIVETFSKEET 555 Query: 337 GIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFA 393 G IWP VAP++I ++ ++K+ + E++ + + + +D + + Sbjct: 556 GFIWPQQVAPYQIIIVPKHLKSQLSLAESVSEQLQTEIPYLKSRIIIEDRSKAHFAQKVL 615 Query: 394 VADLLGFPLQVIV-----------GSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 + +G P +++ S V+ K+E K + ++ ++INY ++F Sbjct: 616 ESKFMGIPYFLVIDNNNKSIELGESSTKVNSFKIEYKSETPTLIQNQF--DLINYFKNKF 673 Query: 443 S 443 + Sbjct: 674 N 674 >gi|298245367|ref|ZP_06969173.1| prolyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] gi|297552848|gb|EFH86713.1| prolyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] Length = 578 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 94/228 (41%), Positives = 134/228 (58%), Gaps = 6/228 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E D E + L+ R G + Q + G+YS LPLG++ + + IIR E Sbjct: 1 MRYSQLLGGTLRERAHDVESTNLDLLTRGGFVRQLTSGVYSMLPLGERVMRKLTEIIRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWV------ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 R G E+S+P LQ ++W ++ R + YG + L DR ++ ++ GPTHEE+ Sbjct: 61 MERIGGQEVSMPVLQPREIWEARPQSGKASRAEGYGPVLFSLHDRRERELVLGPTHEEIC 120 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 T + + I+SYR+LP +Q+Q KFRDE R R G++R REFLMKD YSFD EG ++ Sbjct: 121 TLLAQEFIRSYRDLPRLVFQVQRKFRDEPRARGGLLRLREFLMKDLYSFDADEEGLNANF 180 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 + +Y RIF R GL I + A+SG IGG S EFI L + GE + Sbjct: 181 ELVREAYCRIFARCGLDFIVVEADSGAIGGKESLEFIALTEAGEDTIL 228 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 95/157 (60%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG E+GHIF GT YS +ATF A+G+ + M SYGIG R++A ++E HD +G+ Sbjct: 413 RGCELGHIFKLGTIYSDLFNATFLDAEGRTQPLIMASYGIGISRLLACIVEQQHDARGLT 472 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP +VAP+ +SL+ I + A E++YA L G +V +DD E G +F ADLLG Sbjct: 473 WPLAVAPYAVSLVGIDLVKEEIGRAAEQLYADLCAAGVEVLFDDRHESAGIKFNDADLLG 532 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 PL+V+V + + VE+K R + + +SL E +N Sbjct: 533 LPLRVVVSKRSLKQGGVELKVRTSQESQIVSLSEALN 569 >gi|320162939|gb|EFW39838.1| prolyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864] Length = 788 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 93/222 (41%), Positives = 133/222 (59%), Gaps = 1/222 (0%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S F P+ DA+ SH+ + G++ QH+ GIY+ P+G +AL+NV II EE Sbjct: 126 STLFAPLFAPLGADAKTLSHRYLTYAGLMVQHAAGIYALTPVGLRALENVTRIICEELEL 185 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 GA ++P L + +LW ++GR+ S G+E+ RL DR + M+ GPTHEE + ++ + Sbjct: 186 VGAQRTALPMLMTKELWDKTGRWTSSGQEVFRLQDRKGRDMLLGPTHEEAVCELAATKPL 245 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 P YQ+ KFRDE RPR G+MR REF MKD Y+FD+ E + +Y+ + Y R Sbjct: 246 GRGQFPLMLYQLDRKFRDEARPRHGLMRGREFWMKDLYTFDVDIEHAAKTYDTICGVYGR 305 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 IF RLGL + A++G IGG SHEF V++ GE T + CS Sbjct: 306 IFDRLGLDYVRAEADTGNIGGVRSHEFHVISPAGEDTLLVCS 347 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 69/181 (38%), Gaps = 58/181 (32%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS-HDG 335 V+ G+EVGH F G KYS P+ TF A K +MG YG+G R++AA++E+ H+ Sbjct: 543 VTKLGMEVGHAFLLGQKYSQPLGVTFTNAANKRVTTEMGCYGLGVSRILAALVETQLHNA 602 Query: 336 KGII---------------------------------WPDSVAPFKISL----------- 351 + I WP VAPF + Sbjct: 603 QTTIAQSPAASTTAPAGAAAAATPKHQQQTDLLTLVRWPIEVAPFAVCFSFGGLGLSDET 662 Query: 352 ------INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 + + HD + R + A L D +G Q V+D+LG P+ + Sbjct: 663 RDKWQKVALALHDTIVRQGILPVNAML-------IDDRLGASAREQARVSDVLGVPINIT 715 Query: 406 V 406 + Sbjct: 716 I 716 >gi|119025474|ref|YP_909319.1| prolyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] gi|152112217|sp|A1A0K4|SYP_BIFAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118765058|dbj|BAF39237.1| prolyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] Length = 605 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 101/260 (38%), Positives = 147/260 (56%), Gaps = 2/260 (0%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 2 STMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLNVLNKIENIIREEMAS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 62 IDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y +Y R Sbjct: 122 SYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYER 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 IF+RL LK +P+ A +GP+GG S EF+ + GE S + + + T + I Sbjct: 182 IFNRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPEAI 241 Query: 244 SLNSI--VEQWTAPYAATSD 261 + E+ P AAT D Sbjct: 242 DFTATPAAEKRPTPDAATID 261 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MGSYGIG RV+A + E+ HD KG+ Sbjct: 438 RGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMGSYGIGVSRVMACIAETHHDEKGLA 497 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP ++ ++ D +A E++ L G +V +DD + G +F A+L+ Sbjct: 498 WPAVIAPAQVHVVAT-GKDAAAFEAAEQLIGELEAKGIEVIFDDRKKVSPGVKFKDAELI 556 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P+ + G V++ +E++ R Sbjct: 557 GVPIIAVAGRDTVNNGTIEVRDR 579 >gi|326793278|ref|YP_004311099.1| prolyl-tRNA synthetase [Clostridium lentocellum DSM 5427] gi|326544042|gb|ADZ85901.1| prolyl-tRNA synthetase [Clostridium lentocellum DSM 5427] Length = 568 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 94/225 (41%), Positives = 134/225 (59%), Gaps = 2/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK +E P +A SH +LR G + Q + GIYS LP ++ + + IIR+E Sbjct: 1 MLMSKLLGERFKEKPGEATSISHIYLLRGGYVRQVTNGIYSLLPPAKRVVSKIENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ P DLW ESGR+D+ G E++R DR K M+ G THEE + R+ Sbjct: 61 MDAIDGQEVLFPVALPGDLWRESGRFDAVGSELVRFKDRGGKDMVLGMTHEEAAVHLART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSY N PF YQIQ KFRDE R R G++R REF MKDAYSF + E + Y + + Sbjct: 121 EAKSYNNYPFMIYQIQTKFRDEPRARGGLIRVREFTMKDAYSFHTSQEDLEAYYEQCLQA 180 Query: 181 YLRIFHRLGL-KSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y RIF R G+ +++ +++++G +GG ++HEF++L D GE T + C Sbjct: 181 YHRIFARAGVPETVCVQSDTGMMGGKVAHEFMLLTDIGEDTIIIC 225 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/155 (41%), Positives = 93/155 (60%), Gaps = 1/155 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+EVG+IF GT+YS M T+ +DGK MG YGIG R++A +IE+ HD G I Sbjct: 403 RGVEVGNIFQLGTRYSESMGMTYIDSDGKAKTPIMGCYGIGVGRLLACIIEARHDEWGPI 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP SVAP+++ + +K+ +IY +LS +V DD G QFA ADLLG Sbjct: 463 WPMSVAPWQVHICVLKSKKTDMDAIGNEIYNKLSS-KYEVIMDDRNVGAGVQFADADLLG 521 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 P++V+VG K + + KVE+ R +++ + L +V Sbjct: 522 IPVRVVVGEKNLKEGKVELMTRDKSVKKLVDLGDV 556 >gi|167749838|ref|ZP_02421965.1| hypothetical protein EUBSIR_00806 [Eubacterium siraeum DSM 15702] gi|167657150|gb|EDS01280.1| hypothetical protein EUBSIR_00806 [Eubacterium siraeum DSM 15702] Length = 589 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 94/222 (42%), Positives = 130/222 (58%), Gaps = 1/222 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ K +E P D +I SH +M+R G I + GI+S ++ + IIREE Sbjct: 16 MKLEKLVGDRFKERPSDCQIDSHAIMVRGGYIKYMANGIFSSYAPTKRITKKIEQIIREE 75 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + A LW ESGRY+S G E+LR DRN M+ G THEE + R Sbjct: 76 MDKIDGQEVQFPVVMPASLWQESGRYESIGSELLRFTDRNRMPMVLGMTHEEAAVHLVRE 135 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + KSY PF YQIQ KFRDE RPR G++R REF MKDAYSF + E + Y+K + Sbjct: 136 YGKSYTKYPFMIYQIQTKFRDEARPRGGLIRVREFTMKDAYSFHTSQEDLEQYYDKCHKA 195 Query: 181 YLRIFHRLGL-KSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y IF R G+ + I ++++SG +GG +SHEF++L GE + Sbjct: 196 YENIFRRAGVPEVISVKSDSGMMGGSISHEFMLLTPVGEDTI 237 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 90/156 (57%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RGIEVG+IF GTKY+ M T+ ++G++ MG YGIG R+ A+V E+ HD G Sbjct: 417 SRGIEVGNIFQLGTKYTKTMGMTYLDSNGEEKTPIMGCYGIGVGRLAASVCEAHHDDYGP 476 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP +AP+++ + +++ D + +K+Y L G +V +DD G F+ ADLL Sbjct: 477 IWPMPIAPWQVHICAVRSDDADVKACADKLYDTLQNAGAEVIYDDRQVSAGVMFSDADLL 536 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL+V+V + + D+ EI R + +EE Sbjct: 537 GVPLRVVVSPRNLKDNCCEISARDKSFSYKVPVEET 572 >gi|159900080|ref|YP_001546327.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|226701298|sp|A9B562|SYP_HERA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|159893119|gb|ABX06199.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 566 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 89/224 (39%), Positives = 133/224 (59%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F L+E P +AE+A+H+L+LR G+ Q G + LPLG + + AI+ E Sbjct: 1 MRMSSGFGRTLREAPSEAELAAHQLILRAGLARQLLAGGMALLPLGMRVFRRIEAIMHAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E P + +A LW ++GRY YG+ MLR +RN +A+++ PTHEE + ++ R Sbjct: 61 LAAIGAGEFRTPVVHAASLWEQTGRYAQYGEAMLRFNNRNQQALLFAPTHEEAVAELARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQI K+RDELR R G++R REF M DAYS D G Y+++ ++ Sbjct: 121 EVDSYRQLPSLLYQIHTKYRDELRVRGGLLRLREFTMLDAYSLDTDWAGLDMVYDRVALA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 + IF R G++ + A+ G +GG E++ + +GE + V C Sbjct: 181 FETIFERCGVRFTAVEADGGEMGGREPREYMAFSSSGEDSLVVC 224 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 74/186 (39%), Positives = 112/186 (60%), Gaps = 5/186 (2%) Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 W A A D+ N + D+ P + RGIE+GHIF GT+Y+ + AT+ G+ Sbjct: 374 WQATVVA--DIANVEEGDACPVCGAALSLERGIEIGHIFKLGTRYTEALGATYLDPQGQA 431 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + MGSYGIG R++ +IE HD KGI+WP SVAPF + L+ + A V +A ++Y Sbjct: 432 QPIVMGSYGIGLERLLQVIIEQHHDEKGIVWPASVAPFDLHLVQLGASATVS-EAANQLY 490 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +LS+ G V +DD E G +F ADLLG PL++ VG + + + VE++ R TG+ E + Sbjct: 491 QQLSEAGLSVLYDDRNESAGVKFNDADLLGMPLRLTVGERGLKQNVVELRQRATGVVETI 550 Query: 430 SLEEVI 435 +L++V+ Sbjct: 551 ALDQVV 556 >gi|255348758|ref|ZP_05380765.1| prolyl-tRNA synthetase [Chlamydia trachomatis 70] gi|255503298|ref|ZP_05381688.1| prolyl-tRNA synthetase [Chlamydia trachomatis 70s] gi|255506977|ref|ZP_05382616.1| prolyl-tRNA synthetase [Chlamydia trachomatis D(s)2923] gi|407685|gb|AAA23161.1| aminoacyl-tRNA synthetase [Chlamydia trachomatis] gi|289525435|emb|CBJ14912.1| prolyl-tRNA synthetase [Chlamydia trachomatis Sweden2] gi|296434987|gb|ADH17165.1| prolyl-tRNA synthetase [Chlamydia trachomatis E/150] gi|296438707|gb|ADH20860.1| prolyl-tRNA synthetase [Chlamydia trachomatis E/11023] gi|745528|prf||2016314B AA-tRNA synthetase Length = 581 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 94/229 (41%), Positives = 139/229 (60%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F + ++A + S++L+ + G + + SKGIYS+ PL Q+ + + IIREE Sbjct: 1 MRTSLLFYRTSKNVNKEASVLSYELLQKAGYLFKTSKGIYSYTPLFQRVILKMTEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P LQ A+LW ++GR+ ++ E L L DR ++AM PTHEEV+++ Sbjct: 61 LNAIGGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKDRENEAMCLAPTHEEVVSEFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + LP YQI KFRDE+RPRFG+MR++EFLM+D+Y+F +PE + Y K+ Sbjct: 121 AQWLTGREQLPIHLYQIGTKFRDEIRPRFGLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++Y RIF RL LK + + A+ G IG S EF VL GE + S + Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFHVLCSLGEDTICVSGSY 229 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 5/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA---RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P A D + D P+N +G+EV HIF GT+Y+ S F+ +G Sbjct: 379 PLPAFGDFLLAEAGDLCPQNGGAPYEIFQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQL 438 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 MG+YGIG R +AA IE D KG++WP +VAPF I+++ D ++Y Sbjct: 439 CWMGTYGIGVGRTLAACIEQLADNKGLVWPLAVAPFSITIL-YNGGDTEGEATALQLYQS 497 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G + DD E++G + +DLLG P ++I+G F S +EI+ R +G + ++S Sbjct: 498 LNTEGFEPLLDDRNERLGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIESR-SGEKCNVSP 556 Query: 432 EEVINYASHRF 442 E ++++ S Sbjct: 557 ENLLDWCSKNL 567 >gi|301117334|ref|XP_002906395.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4] gi|262107744|gb|EEY65796.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4] Length = 603 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 95/256 (37%), Positives = 150/256 (58%), Gaps = 4/256 (1%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 RS + P ++ P DA + SH+L++R G + + G+++ LPLG++ + + A+I +E Sbjct: 34 RSVLWAPTEKQAPSDAAVPSHQLLVRAGFVRKGGHGLFALLPLGRRVVAKLEALIDDEMC 93 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + + L +LW +SGR+ S G E++ L DR + +I GPTHEE +T + +H Sbjct: 94 KIGGNRVDLTVLTPNELWKQSGRWQSRGPELMTLEDRREDLLILGPTHEESITSLVAAHY 153 Query: 123 KS--YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + + YQI KFRDE+RPRFG++R+REF+MKD YSFD + E + +Y + + Sbjct: 154 NAAGTADSSLRLYQIGRKFRDEIRPRFGLLRAREFVMKDMYSFDTSYEKALQTYEDVTAA 213 Query: 181 YLRIF-HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTD 238 Y I RL L + A+SG IGG+LSHEF VLAD GE + CS D+ E + Sbjct: 214 YNEILISRLKLPVKRVEADSGNIGGNLSHEFHVLADVGEDAILSCSSSECDYAANVEKAE 273 Query: 239 FDDIISLNSIVEQWTA 254 + +S + ++ +A Sbjct: 274 GNLPVSSEELSDEVSA 289 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 9/153 (5%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGH+FY G KYS P AT+ A ++MG YG+G R+VAA +E+SHD GI Sbjct: 427 RGIEVGHVFYLGQKYSKPFGATYTDAKNNKVSLEMGCYGLGVSRLVAAAVEASHDDHGIA 486 Query: 340 WPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSK------VGCDVFWDD-MGEQIGS 390 WP +AP+K+ +++I K D A + +L+ V DV DD E GS Sbjct: 487 WPMEIAPYKVLVMSIGGKKQDDPVSQAAWYVAGKLASGDVAGLVRDDVLLDDRWRESPGS 546 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + A ++L+G+P +V+VG +F + VE++ R T Sbjct: 547 KLAESELIGYPYRVVVGKRFTKEGLVEVQTRAT 579 >gi|154483386|ref|ZP_02025834.1| hypothetical protein EUBVEN_01089 [Eubacterium ventriosum ATCC 27560] gi|149735896|gb|EDM51782.1| hypothetical protein EUBVEN_01089 [Eubacterium ventriosum ATCC 27560] Length = 579 Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 92/222 (41%), Positives = 128/222 (57%), Gaps = 1/222 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK +E P + I SH LM+R G I + GIYS P ++ + IIR+E Sbjct: 1 MKLSKLVGDRFKERPANCLIDSHALMVRGGYIKNVANGIYSQFPPMKRISQKIENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P LW ESGRY+S G E+LR DR M+ G THEE + R Sbjct: 61 MDKLDGQEVLFPVALPGSLWEESGRYESVGSELLRFTDRTGSKMVLGMTHEEASVQLVRE 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY PF YQIQ KFRDE RPR G++R REF MKDAYSF + E + Y K++ + Sbjct: 121 YANSYAKYPFMIYQIQTKFRDEARPRAGLIRVREFTMKDAYSFHTSQEDLEQYYQKVYDA 180 Query: 181 YLRIFHRLGLKSIPM-RAESGPIGGDLSHEFIVLADTGETQV 221 Y RIF R G+ + + +++SG +GG +SHE+++L GE + Sbjct: 181 YSRIFARCGIPEVAIVKSDSGMMGGSISHEYMLLTPVGEDSI 222 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 102/163 (62%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RGIEVG+IF GTKYS M+ T+ +GK+ Y MG YGIG R+ A++ E HD G Sbjct: 402 SRGIEVGNIFQLGTKYSKAMNFTYTDENGKEQYPIMGCYGIGVGRMAASICEVRHDDYGP 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP ++AP+++ L +++ D C++ ++IY L +G +V +DD + G+ FA ADLL Sbjct: 462 IWPITIAPWQVHLCCLRSDDAECKEKADEIYETLQNMGIEVIYDDRKARPGAMFADADLL 521 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIRE-----DMSLEEVIN 436 G P++V+V + ++++ VEI R I + D ++ EV N Sbjct: 522 GVPVRVVVSPRNLAENVVEISTRDKSIDKQKTPVDQAVTEVQN 564 >gi|283455556|ref|YP_003360120.1| proS Prolyl-tRNA synthetase [Bifidobacterium dentium Bd1] gi|283102190|gb|ADB09296.1| proS Prolyl-tRNA synthetase [Bifidobacterium dentium Bd1] Length = 605 Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 101/260 (38%), Positives = 145/260 (55%), Gaps = 2/260 (0%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 2 STMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLTVLNKIENIIREEMAS 61 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 62 IDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDLYS 121 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y +Y R Sbjct: 122 SYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYER 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 IF RL LK +P+ A +GP+GG S EF+ + GE S + + + T + I Sbjct: 182 IFDRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPEAI 241 Query: 244 SLNSI--VEQWTAPYAATSD 261 E+ P AAT D Sbjct: 242 DCTDTPAAEKRPTPDAATID 261 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+E+G +F G KYS + +GK V MGSYGIG RV+A + E+ HD KG+ Sbjct: 438 RGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMGSYGIGVSRVMACIAETHHDDKGLA 497 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLL 398 WP +AP ++ ++ D +A E++ A L G +V +DD + G +F A+L+ Sbjct: 498 WPAVIAPAQVHVVAT-GKDAAAFEAAEQLIAELEAKGIEVIFDDRKKVSPGVKFKDAELI 556 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL + G V++ +E++ R Sbjct: 557 GVPLIAVAGRDTVNNGTIEVRDR 579 >gi|15611293|ref|NP_222944.1| prolyl-tRNA synthetase [Helicobacter pylori J99] gi|11135064|sp|Q9ZMJ6|SYP_HELPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|4154734|gb|AAD05795.1| PROLYL-TRNA SYNTHETASE [Helicobacter pylori J99] Length = 576 Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + S K + G I+Q GIY++LPL +K LD + + + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSPKHPGKAGYIYQIGSGIYNFLPLAKKVLDKIENVTHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y I LGL + A+SG IGG S EF+VL + GE T V C Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVC 224 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++ ++E D G + Sbjct: 411 KSLEVGHIFKLGQSYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSVILEQKSDDLGCV 470 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 471 WTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFELIG 530 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + E R ++ D+ LEE I Sbjct: 531 ERLALIVGKQTLESKEFECIKRANLEKQTIKDIELEEKI 569 >gi|34763882|ref|ZP_00144786.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886345|gb|EAA23616.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 175 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 83/153 (54%), Positives = 112/153 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 5 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIKKIENIVREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 65 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIVRS 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 I SY++LP Y IQ KFRDE RPRFG+MR R Sbjct: 125 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGR 157 >gi|89898569|ref|YP_515679.1| prolyl-tRNA synthetase [Chlamydophila felis Fe/C-56] gi|114152181|sp|Q253K4|SYP_CHLFF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|89331941|dbj|BAE81534.1| prolyl tRNA synthetase [Chlamydophila felis Fe/C-56] Length = 577 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 91/229 (39%), Positives = 137/229 (59%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F + +DA + S++L+ + G I + +KG+Y++ PL + + I+REE Sbjct: 1 MRTSQLFYKTSKNANKDAAVLSYELLEKAGYIFKTAKGVYTYTPLFWRVALKMMDIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML--RLADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P L A+LW ++GR++++ E L L DR DK + PTHEEV+T Sbjct: 61 LNAIGGQELMLPILHPAELWQKTGRWEAFRSEGLLYTLTDREDKELCLAPTHEEVVTMFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + + LP YQI KFRDE+RPRFG+MR+REFLM+D+Y+F +PE Y+K+ Sbjct: 121 SQWLSGRKQLPIHLYQIATKFRDEIRPRFGLMRAREFLMEDSYTFSDSPEQMNEQYDKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 +Y +IF RL +K + + A+ G IG S EF VL GE + S D+ Sbjct: 181 RAYQKIFDRLEIKYVIVEADGGKIGKGKSEEFHVLCSLGEDTICVSGDY 229 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 1/141 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 G+EV HIF GT+Y+ F+ G+ MG+YGIG R +AA +E D +GI+W Sbjct: 408 GVEVAHIFNLGTRYTECFDVGFQNEQGEQQTCWMGTYGIGIGRTLAACVEQLADDRGIVW 467 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P ++APF IS++ D ++A EKIY L G DD E++G + +DL+G Sbjct: 468 PKAIAPFDISIL-YNGGDSASQEAAEKIYTELQNSGYAPLLDDRNERLGFKLKDSDLIGI 526 Query: 401 PLQVIVGSKFVSDSKVEIKHR 421 P ++I+G F++ +EI+ R Sbjct: 527 PYKLILGKTFLNSGTLEIESR 547 >gi|78778894|ref|YP_397006.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312] gi|114152228|sp|Q31C25|SYP_PROM9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78712393|gb|ABB49570.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312] Length = 600 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 99/229 (43%), Positives = 140/229 (61%), Gaps = 4/229 (1%) Query: 1 MRRSKYF-LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 MR + F L L++ P +AEI SH+L+L+ G I + GIY+++P+ K ++ ++ II Sbjct: 1 MRVTTSFPLGTLRDTPSEAEIISHQLLLKAGYIRRVYSGIYAYMPIMLKVIEKISKIIEI 60 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTD 116 E N G ++ +P L A+LW +S R++ Y M L DR K PTHEEV+T Sbjct: 61 ELNSIGCTKLLLPQLHPANLWKKSERWEGYTAGEGIMFNLKDRQGKEFGLAPTHEEVITS 120 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 I I SY+ LP FYQIQ KFRDE+RPRFG+MRSREF+MKD YSF + + Y K Sbjct: 121 IASEIINSYKQLPQCFYQIQTKFRDEIRPRFGLMRSREFIMKDGYSFHSSEKDLASFYEK 180 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 + +Y IF GL+++ + A+SG IGG S EF+V AD GE + ++ Sbjct: 181 VGNAYENIFKSCGLETVGVEADSGAIGGASSKEFMVTADAGEDSILFTQ 229 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/178 (35%), Positives = 97/178 (54%), Gaps = 4/178 (2%) Query: 261 DVHNEKLFDSLPENKR---VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N K D + N +GIE+GHIF G KYS ++A F DG + MG Y Sbjct: 409 DIRNAKKGDKIKINDNEELKEKKGIEIGHIFQLGQKYSEKLNAKFSDKDGHLKNLWMGCY 468 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+ A IE +HD KGI WP ++PF++ +I DQ+ RD E+IY Sbjct: 469 GIGVTRIAQAAIEQNHDQKGICWPIQISPFEVIIIPTNLKDQIQRDLTEQIYNNFLVNKI 528 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DV DD ++ G +F A+L+G P Q+I+G + +++VE+ R + +S +++ Sbjct: 529 DVLLDDREDRAGVKFKDAELIGIPFQIIIGRDSI-NNEVELICRTNNTKFKISAHKLL 585 >gi|257456072|ref|ZP_05621275.1| prolyl-tRNA synthetase [Treponema vincentii ATCC 35580] gi|257446530|gb|EEV21570.1| prolyl-tRNA synthetase [Treponema vincentii ATCC 35580] Length = 578 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 90/226 (39%), Positives = 140/226 (61%), Gaps = 1/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+RS+ F+P L+E P +A + SH+L+LR GMI + G++++LPLG + V I+REE Sbjct: 1 MKRSQTFIPTLRETPAEAVVVSHQLLLRAGMIRRLGNGLFNYLPLGLRVFRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G +E + ++W ES R+ + G +LR+ +R + ++ PT+EE T + R Sbjct: 61 IDAIGCLECKASVVAPGEIWQESKRWYTMGDGLLRMKNRLGQDLVVSPTNEESFTALMRY 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++ P + Y I K+RDE+RPR+G+MR+REF MKDAYSF E +Y + Sbjct: 121 ELGSYKDYPLSVYHINTKYRDEIRPRYGLMRAREFTMKDAYSFHTNAECLDKTYRAFGEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG-ETQVFCSK 225 Y +IF R GL I +RA+SG +GG S EF+V + G +T + C + Sbjct: 181 YEKIFRRFGLSIIRVRADSGSMGGSGSEEFMVESAIGDDTLILCPQ 226 Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 5/187 (2%) Query: 257 AATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A DV K DS P S +G E+GHIF GTKY+ M+ T+ G+ Y M Sbjct: 385 AMVYDVRVVKAGDSCPLCGTPFYSKKGNELGHIFKLGTKYTKSMNMTYLDESGQQQYPLM 444 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R +A++IE HD GIIWP SVAP+ + ++ I+ ++ + A ++++ L+ Sbjct: 445 GCYGIGIDRALASIIEEHHDSNGIIWPMSVAPYHVGIVPIQ-YEGTMKAAADRLHDELTM 503 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G +F DL+G P+++++ K + + VE K R +M L+ V Sbjct: 504 RGIEVLLDDRVERPGVKFKDMDLIGLPIRIVISDKKLPN--VEFKFRSDTDPVNMPLDGV 561 Query: 435 INYASHR 441 +Y R Sbjct: 562 ADYVVQR 568 >gi|115532348|ref|NP_001040689.1| Prolyl tRNA Synthetase family member (prs-2) [Caenorhabditis elegans] gi|3880329|emb|CAB04884.1| C. elegans protein T27F6.5a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 454 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 125/399 (31%), Positives = 200/399 (50%), Gaps = 46/399 (11%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +H +++ G I +KG YS LPLGQ+ +D + I+ E +GA+++++P + + LW Sbjct: 22 AHTMLVENGFILPTAKGFYSLLPLGQRVIDKLCRILDVEFQNSGALKIAMPIVGTQQLWE 81 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR--SHIKSYRNLPFTFYQIQLKF 139 ++GR+++ G EM+R DR M PT EE+ T++ S +K + P YQI KF Sbjct: 82 KTGRWEAMGPEMIRFHDRQQNHMCLQPTAEEMCTELIATLSPLKKSQ-FPLIVYQIGEKF 140 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH---RLGLKSIPMR 196 RDE+ PRFG+MR R+FLMKD YSF E S+ +Y ++ Y RIF +L I + Sbjct: 141 RDEMNPRFGLMRGRQFLMKDMYSFSTDAETSQQTYAQIRQIYDRIFGEILQLDEDVIKVE 200 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 A+SG GG +SHE+ + + E DF++F +N + ++ P Sbjct: 201 ADSGVHGGHISHEYHLKSSLEE-------DFVNFCENCKNHN------------KFEGPG 241 Query: 257 AATSDVHNE---KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A + E K +P +E+ H F+ GTKYS + A F+G + Sbjct: 242 PAKCEKCAENSSKTVQKIPS--------VEIAHTFHLGTKYSEALGAKFQGKP-----LD 288 Query: 314 MGSYGIGAMRVVAAVIE-SSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 M +GIG R++ A I+ S K + P ++APF +I K+ V + +R Sbjct: 289 MCCFGIGVTRLLPAAIDLLSVSDKALRLPRAIAPFDAVIIVKKSLMSNVIVEMASSSASR 348 Query: 372 LSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSK 409 K G + DD E G + A+ LG P +++ ++ Sbjct: 349 YLKGG--ILLDDRVEMSAGKRIHDANRLGIPFILVIANE 385 >gi|312077863|ref|XP_003141488.1| hypothetical protein LOAG_05904 [Loa loa] gi|307763347|gb|EFO22581.1| hypothetical protein LOAG_05904 [Loa loa] Length = 515 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 140/473 (29%), Positives = 220/473 (46%), Gaps = 65/473 (13%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLG--------------- 46 R S L L + A+I H+LML +I Q KGIYS LP+G Sbjct: 72 RASTMLLGSLDVKAKTAQIF-HQLMLSKALIAQEHKGIYSILPIGIEKYIGLKWSLTVHF 130 Query: 47 -----QKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND 101 Q+ +D + +I E N GA ++S+P L + ++W ++GR+ ++ EM L D+ + Sbjct: 131 AFFFGQRIIDKLVEVIETELNAIGAYKISMPILGAKEMWQKAGRWSTFESEMFHLNDKTN 190 Query: 102 KAMIYGPTHEEVMTDIFRSHIKSYRNL-PFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 + PTHEE++T + + + + P YQ+ KFRDE G +RSREFLM D Sbjct: 191 QVFCLQPTHEEMVTKLVAEQGELRKAIYPLMLYQMGPKFRDETVVGHGFLRSREFLMNDL 250 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFH-RLGLKSIPMRAESGPIGGDLSHEFIVLADTGET 219 YSFD+T E + +Y+ + Y RIF RLG+ +RA++G IGG++SHE+ + T Sbjct: 251 YSFDITEENASDTYSLVSEVYQRIFRDRLGINFYTVRADTGNIGGEMSHEYHLPCRTSHD 310 Query: 220 QV-FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 + +C+K + N D L S + TS + Sbjct: 311 SIAYCAKCSLGV-----NHDL-----LKSGEKPCCCDEEYTSII---------------- 344 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES-SHDGKG 337 + IE+ H F G ++ A +G + M +GIG R++AA+I+S S + Sbjct: 345 -KTIEIAHTFQLGDLFTKKFGAKHRG-----QLLIMNCFGIGIGRLIAALIDSMSPSARA 398 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC---DVFWDD-MGEQIGSQFA 393 + P + PFK+++I + I LSK+ D+F DD + IG + Sbjct: 399 LRLPYPLTPFKVAVILPNKTQPETMAFAQDIIGLLSKIPSLQDDIFVDDRLDNSIGRRLR 458 Query: 394 VADLLGFPLQVIVGS----KFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 VA LG P ++VG+ K S VE I E +S+ ++ + RF Sbjct: 459 VAANLGVPHILVVGNRTARKLTSQPTVEYYRTEAYIDEPISVGDIEYFEIPRF 511 >gi|308464804|ref|XP_003094666.1| CRE-PARS-2 protein [Caenorhabditis remanei] gi|308247063|gb|EFO91015.1| CRE-PARS-2 protein [Caenorhabditis remanei] Length = 470 Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 124/413 (30%), Positives = 204/413 (49%), Gaps = 56/413 (13%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 A+H++++ G I KG YS LPLGQ+ +D + I+ E + GA+++ +P + + LW Sbjct: 21 AAHRMLIENGFILPTGKGFYSLLPLGQRVIDKLCRILDTEFQKAGAMKIGMPIVGTKTLW 80 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN-LPFTFYQIQLKF 139 ++ R+D+ G EM++L DR + PT EE+ T++ S ++ P YQI KF Sbjct: 81 DKTKRWDAMGTEMIKLEDRQKAPLCLQPTAEEMCTELIASLPPLKKSQFPVMIYQIGDKF 140 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF-------------- 185 RDE+ PRFG+MRSR+FLMKD Y+F E S+ +Y K+ Y +IF Sbjct: 141 RDEMNPRFGLMRSRQFLMKDMYTFSTDQEASRETYRKICRVYEKIFGQQLQLGGDLIKPI 200 Query: 186 ---HRLGL----KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 +RL L + A+SG GG +SHE+ + ++ E DF++ Sbjct: 201 SGQNRLNLILNYSLFQVEADSGIHGGHISHEYHLRSNLDE-------DFVNL-------- 245 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D + N + T D ++K +++VS+ +E+ H F+ GTKYS + Sbjct: 246 CDSCGTFNKSEDVTTLKKCPNCDSAHQK-------SRKVSS--VEIAHTFHLGTKYSETI 296 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIE-SSHDGKGIIWPDSVAPFKISLINIKA- 356 A F+G + M +GIG R++ A ++ S K + P ++APF ++I K+ Sbjct: 297 GAKFQGKP-----LDMCCFGIGVSRLLPATVDLLSCSEKAMRLPRAIAPFDAAIIVKKSL 351 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGS 408 V + +R K G + DD E G + A+ LG P +++ + Sbjct: 352 MSNVIVEMTSSSASRYLKGG--ILLDDRIEMSAGRRIHEANRLGIPFIIVLAN 402 >gi|241818170|ref|XP_002416554.1| tRNA synthetases class II, putative [Ixodes scapularis] gi|215511018|gb|EEC20471.1| tRNA synthetases class II, putative [Ixodes scapularis] Length = 410 Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 121/398 (30%), Positives = 196/398 (49%), Gaps = 43/398 (10%) Query: 24 KLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVES 83 +LML G+I G + LPL K+L+ + +I E G ++ +P L L+ ++ Sbjct: 1 QLMLDYGLISPSGTGTFVLLPLATKSLERLVDLIDSELQSVGGQKILLPCLVPGSLFKKT 60 Query: 84 GRYDSYGKEMLRLADRNDKAMIYGPTHEE-VMTDIFRSHIKSYRNLPFTFYQIQLK---F 139 G+++ G E+ +L DR D GPTHEE V + S R LP YQ++ + + Sbjct: 61 GKWEDMGDELFKLKDRRDHDYCLGPTHEEAVSQLLASLPSLSLRCLPILLYQVRGRLSHY 120 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 R + P G + + L D YSFD + E + +Y+ + +Y RI RLG+ + ++A S Sbjct: 121 RRCMAP--GFVATCGTLFADMYSFDRSAESAAETYDIVCTAYSRILERLGVPFVKVKASS 178 Query: 200 GPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAA 258 G +GG+ SHEF L++ GE ++F C K + + ++ T+ N +Q + P Sbjct: 179 GAMGGNYSHEFHFLSNIGEDRLFVCPKCHIG--VSADKTE-------NQPCDQCSTP--- 226 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 L E RG+EV H F GT YS P+ A+F +DGK+ + M +G Sbjct: 227 ------------LEEE-----RGVEVAHAFSLGTVYSDPLKASFMDSDGKNKALVMNCFG 269 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA---HDQVCRDACEKIYARLSK- 374 IG R++AA +E + WP ++APFK++++ KA ++V + + LS Sbjct: 270 IGVTRLLAASLEVLSTQSQLRWPLAIAPFKVAVVTPKARSHEEEVGLPLSLHLTSCLSSQ 329 Query: 375 --VGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSK 409 + DV DD IG + D +G P V+ G + Sbjct: 330 DILAGDVLLDDRDSWTIGKRLKDLDHMGVPFVVVAGKR 367 >gi|225016294|ref|ZP_03705486.1| hypothetical protein CLOSTMETH_00197 [Clostridium methylpentosum DSM 5476] gi|224950969|gb|EEG32178.1| hypothetical protein CLOSTMETH_00197 [Clostridium methylpentosum DSM 5476] Length = 574 Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 97/225 (43%), Positives = 132/225 (58%), Gaps = 2/225 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK +E P DA I SH ML+ G I Q GIYS L ++ ++ + IIREE Sbjct: 8 MLLSKLLGERYKEKPADASIPSHIFMLKGGYIRQVGNGIYSMLMPTKRIVNKIENIIREE 67 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ P + +LW ESGRY+S G E++R DR+ + G THEE + R+ Sbjct: 68 MDAIDGQEVLFPVVLPRELWDESGRYESVGSELVRFHDRSGGDYVLGMTHEEAAVHLARN 127 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY PF YQIQ KFRDE R R G++R REF MKDAYSF + E + Y+ + Sbjct: 128 EAQSYAKYPFMIYQIQTKFRDEPRSRGGLIRVREFTMKDAYSFHTSQEDLERYYDICHKA 187 Query: 181 YLRIFHRLGL-KSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFC 223 Y RIF R+GL + I + ++SG +GG ++HEF++L D GE T V C Sbjct: 188 YERIFERVGLPEVISVGSDSGMMGGAVAHEFMLLCDAGEDTIVTC 232 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 63/155 (40%), Positives = 90/155 (58%), Gaps = 1/155 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+EVG+IF GTKY+ M + DGK MG YGIG R+ A +IES HD G I Sbjct: 409 RGVEVGNIFQLGTKYTESMQMVYTDQDGKQQTPIMGCYGIGVGRLAACIIESHHDDYGPI 468 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP +VAP++I + + + ++Y +LSK +V DD G G QFA ADLLG Sbjct: 469 WPYAVAPWQIHICALSNKKMDVQPIARELYDKLSK-NYEVILDDRGANAGVQFADADLLG 527 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 P++++V K + + +VEI R I+ + LE++ Sbjct: 528 VPIRIVVSVKNIENGEVEISTRDKSIQTKVKLEDI 562 >gi|167589833|ref|ZP_02382221.1| prolyl-tRNA synthetase [Burkholderia ubonensis Bu] Length = 382 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 124/426 (29%), Positives = 194/426 (45%), Gaps = 62/426 (14%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 +A++ L + HQ + G+YSW+ LG +A V ++R+E +R G E+ + LQ Sbjct: 17 NAKLELTDLARKACFFHQDAAGLYSWMSLGLRAQRCVERVVRDEMDRAGFCEVQMSLLQD 76 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 ADLW +SGR D YG E++RL +R + G T EE+ ++ R+H +L YQ Sbjct: 77 ADLWRQSGRLDIYGDELMRLTNRAGRLFCLGATCEELAANMVRTHYNRT-DLSLGLYQFG 135 Query: 137 LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 K+RDELR R G++R+REF+MKDAY+F T +G++ +Y + +Y RIF RLGL +I Sbjct: 136 NKYRDELRTRGGLVRAREFIMKDAYAFHATDDGARAAYETVRDAYRRIFGRLGLDAIAKS 195 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 ++G IGG S EF V+++ GE + + I + ++ L Sbjct: 196 GDNGEIGGRSSEEFHVVSELGEDEADGRRSLECAHIFDLGDRYSKVLGL----------- 244 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS-LPMSATFKGADGKDHYVQMG 315 V+A+G E + FG S L M + DG+ + G Sbjct: 245 --------------------VNAKG-EFVRMGCFGVGISRLVMLLLDRQRDGRGFW---G 280 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 S VV VI+ W DA +++ L Sbjct: 281 SDAFNTFDVVLTVID---------WERQACQ----------------DAAQRLQRDLQAA 315 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD Q G + A A+L+ +V+V K ++ + E R T E +S E++ Sbjct: 316 GISVLVDDRVVQAGKKLADAELIACRQRVVVSRKAIASGRFEWMDRRTLACESVSAEDLA 375 Query: 436 NYASHR 441 + + R Sbjct: 376 GHCARR 381 >gi|15618411|ref|NP_224696.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae CWL029] gi|16752543|ref|NP_444805.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|33241851|ref|NP_876792.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] gi|13633970|sp|Q9Z851|SYP_CHLPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|4376787|gb|AAD18640.1| Prolyl tRNA Synthetase [Chlamydophila pneumoniae CWL029] gi|7189180|gb|AAF38117.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|33236360|gb|AAP98449.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] Length = 568 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 89/229 (38%), Positives = 133/229 (58%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F + + A + S++L+ + G + + SKG+Y++ PL + + + IIREE Sbjct: 1 MKTSQLFYKTSKNANKSAAVLSNELLEKAGYLFKVSKGVYTYTPLLWRVVSKMMNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML--RLADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P L +A+LW +GR++++ E L L DR K+ PTHEEV+ Sbjct: 61 LNAIGGQELLLPLLHNAELWQHTGRWEAFTSEGLLYTLKDREGKSHCLAPTHEEVICSFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + S R LP YQI KFRDE+RPRFG++RSRE LM+D+Y+F +PE Y K+ Sbjct: 121 AQWLSSKRQLPLHLYQIATKFRDEIRPRFGLIRSRELLMEDSYTFSDSPEQMNEQYEKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 +Y +IF RLGL + + A+ G IG S EF VL GE + S + Sbjct: 181 SAYSKIFDRLGLAYVIVTADGGKIGKGKSEEFQVLCSLGEDTICVSGSY 229 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 4/156 (2%) Query: 269 DSLPENKRVSAR---GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 D+ PEN R GIEV HIF GT+Y+ F+ G+ MG+YGIG R + Sbjct: 393 DTCPENPGHPYRIYQGIEVAHIFNLGTRYTDSFEVNFQDEHGQTQQCWMGTYGIGVGRTL 452 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 AA +E D +GI+WP ++APF I+ I D V ++ E IY L G + DD Sbjct: 453 AACVEQLADDRGIVWPKALAPFSIT-IAFNGGDTVSQELAETIYHELQSQGYEPLLDDRD 511 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++G + +DL+G P ++I+G + S EI+ R Sbjct: 512 ERLGFKLKDSDLIGIPYKLILGKSYQSSGIFEIESR 547 >gi|269127985|ref|YP_003301355.1| prolyl-tRNA synthetase [Thermomonospora curvata DSM 43183] gi|268312943|gb|ACY99317.1| prolyl-tRNA synthetase [Thermomonospora curvata DSM 43183] Length = 565 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 92/222 (41%), Positives = 131/222 (59%), Gaps = 7/222 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+++ P L+++P DAE A H+L++R G I + + G YS LP + + +IR+E Sbjct: 1 MRWSRFYAPTLRQDPADAETAGHRLLVRAGFIRRLAAGHYSLLPPAARVRSKIIEVIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ A+LW +GR+D+ G+E RL DR G THEEV+ + + Sbjct: 61 MDRIGAQEVLLPALQPAELWRRNGRWDASGEETFRLTDRKGAEAALGTTHEEVVASLA-T 119 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP +YQ Q FRDE RPR G++ REF +KDAYS D + S+ + Sbjct: 120 ELGSYRRLPQLWYQFQTAFRDEARPRSGLLGLREFTLKDAYSLDADEAALEGSFQAHREA 179 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 Y RIF RLGL P+ GP GG L EF+ ++ G+ V Sbjct: 180 YRRIFQRLGL---PVIEAQGP-GGSL--EFLCPSEAGDDAVV 215 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 81/153 (52%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEV H+ G + + + A G DG + MG Y IG R +AA+ E+ HD G+ WP Sbjct: 403 IEVAHLRKPGRRCTEALGARVLGPDGTEITPLMGRYSIGVERAIAAIAETGHDDSGLRWP 462 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +APF +++ + D A E+IY L+ G + DD E+ G++FA +L+G P Sbjct: 463 AGIAPFDVAVTLLDPRDDQVTAAAEQIYTALAAAGVETILDDRDERPGAKFADTELIGIP 522 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +V VG + + VEIK R TG + + + E Sbjct: 523 YRVTVGKRGLKSGTVEIKTRATGRTDTVPIPEA 555 >gi|15836031|ref|NP_300555.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae J138] gi|8978870|dbj|BAA98706.1| prolyl tRNA synthetase [Chlamydophila pneumoniae J138] Length = 568 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 89/229 (38%), Positives = 133/229 (58%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F + + A + S++L+ + G + + SKG+Y++ PL + + + IIREE Sbjct: 1 MKTSQLFYKTSKNANKSAAVLSNELLEKAGYLFKVSKGVYTYTPLLWRVVSKMMNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML--RLADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P L +A+LW +GR++++ E L L DR K+ PTHEEV+ Sbjct: 61 LNAIGGQELLLPLLHNAELWQHTGRWEAFTSEGLLYTLKDREGKSHCLAPTHEEVICSFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + S R LP YQI KFRDE+RPRFG++RSRE LM+D+Y+F +PE Y K+ Sbjct: 121 AQWLSSKRQLPLHLYQIATKFRDEIRPRFGLIRSRELLMEDSYTFSDSPEQMNEQYEKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 +Y +IF RLGL + + A+ G IG S EF VL GE + S + Sbjct: 181 SAYSKIFDRLGLAYVIVTADGGKIGKGKSEEFQVLCSLGEDTICVSGSY 229 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 83/156 (53%), Gaps = 4/156 (2%) Query: 269 DSLPENKRVSAR---GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 D+ PEN R GIEV HIF GT+Y+ F G+ MG+YGIG R + Sbjct: 393 DTCPENPGHPYRIYQGIEVAHIFNLGTRYTDSFEVNFLDEHGQTQQCWMGTYGIGVGRTL 452 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 AA +E D +GI+WP ++APF I+ I D V ++ E IY L G + DD Sbjct: 453 AACVEQLPDDRGIVWPKALAPFSIT-IAFNGGDTVSQELAETIYHELQSQGYEPLLDDRD 511 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++G + +DL+G P ++I+G + S EI+ R Sbjct: 512 ERLGFKLKDSDLIGIPYKLILGKSYQSSGIFEIESR 547 >gi|218513382|ref|ZP_03510222.1| prolyl-tRNA synthetase [Rhizobium etli 8C-3] Length = 105 Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 76/105 (72%), Positives = 93/105 (88%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIREE Sbjct: 1 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMI 105 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR ++ M+ Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQERPML 105 >gi|29840011|ref|NP_829117.1| prolyl-tRNA synthetase [Chlamydophila caviae GPIC] gi|81838013|sp|Q824A9|SYP_CHLCV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|29834358|gb|AAP04995.1| prolyl-tRNA synthetase [Chlamydophila caviae GPIC] Length = 577 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/226 (38%), Positives = 133/226 (58%), Gaps = 2/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F + ++A + S++L+ + G I + +KGIY++ PL + + I+REE Sbjct: 1 MKTSQLFYKTSKNANKEAAVLSYELLEKAGYIFKTAKGIYTYTPLFWRVALKMMDIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML--RLADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P L A+LW ++GR++++ E L L DR DK + PTHEEV++ Sbjct: 61 LNAIGGQELVLPILHPAELWQKTGRWEAFRSEGLLYTLTDREDKELCLAPTHEEVVSMFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + + LP YQI KFRDE+RPRFG+MR+REFLM+D+Y+F +PE Y K+ Sbjct: 121 SQWLSGRKQLPIHLYQIATKFRDEIRPRFGLMRAREFLMEDSYTFSDSPEQMNEQYAKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 +Y IF RL +K + + A+ G IG S EF VL GE + S Sbjct: 181 QAYQNIFDRLEIKYVIVEADGGKIGKGKSEEFHVLCSLGEDTICVS 226 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 6/168 (3%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 G+EV HIF GT+Y+ F+ + MG+YGIG R +AA IE D +GI+W Sbjct: 408 GVEVAHIFNLGTRYTECFEVGFQNEQEEQQTCWMGTYGIGIGRTLAACIEQLADDRGIVW 467 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P ++APF I+++ D ++A EKIY L G DD E++G + +DL+G Sbjct: 468 PKAIAPFDIAIL-YNGGDAASQEAAEKIYKDLQNYGYAPLLDDRNERLGFKLKDSDLIGI 526 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE--EVINYASHRFSNNR 446 P ++I+G F + +EI+ R RE +E + N+ + F R Sbjct: 527 PYKLILGKTFQNSGVLEIESR---SREKFFVEPKDFFNWCKNYFPKPR 571 >gi|269303377|gb|ACZ33477.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN] Length = 568 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 89/229 (38%), Positives = 131/229 (57%), Gaps = 2/229 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F + + A + S++L+ + G + + SKG+Y++ PL + + + IIREE Sbjct: 1 MKTSQLFYKTSKNANKSAAVLSNELLEKAGYLFKVSKGVYTYTPLLWRVVSKMMNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML--RLADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P L +A+LW +GR++++ E L L DR K+ PTHEEV+ Sbjct: 61 LNAIGGQELLLPLLHNAELWQHTGRWEAFTSEGLLYTLKDREGKSHCLAPTHEEVICSFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + S R LP YQI KFRDE+RPRFG++RSRE LM+D+Y+F +PE Y K+ Sbjct: 121 AQWLSSKRQLPLHLYQIATKFRDEIRPRFGLIRSRELLMEDSYTFSDSPEQMNEQYEKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 Y +IF RLGL + A+ G IG S EF VL GE + S + Sbjct: 181 SGYSKIFDRLGLAYAIVTADGGKIGKGKSEEFQVLCSLGEDTICVSGSY 229 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 4/156 (2%) Query: 269 DSLPENKRVSAR---GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 D+ PEN R GIEV HIF GT+Y+ F+ G+ MG+YGIG R + Sbjct: 393 DTCPENPGHPYRIYQGIEVAHIFNLGTRYTDSFEVNFQDEHGQTQQCWMGTYGIGVGRTL 452 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 AA +E D +GI+WP ++APF I+ I D V ++ E +Y L G + DD Sbjct: 453 AACVEQLADDRGIVWPKALAPFSIT-IAFNGGDTVSQELAETLYHELQSQGYEPLLDDRD 511 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++G + +DL+G P ++I+G + S EI+ R Sbjct: 512 ERLGFKLKDSDLIGIPYKLILGKSYQSSGIFEIESR 547 >gi|207092740|ref|ZP_03240527.1| prolyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1] Length = 204 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 90/204 (44%), Positives = 120/204 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGG 204 Y I LGL + A+SG IGG Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGG 204 >gi|242018749|ref|XP_002429836.1| prolyl-tRNA synthetase, putative [Pediculus humanus corporis] gi|212514854|gb|EEB17098.1| prolyl-tRNA synthetase, putative [Pediculus humanus corporis] Length = 379 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 112/359 (31%), Positives = 178/359 (49%), Gaps = 35/359 (9%) Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N A+EM +P L ++ SG+ ++ ++ + +++ I PT EE+++++ S+ Sbjct: 2 NEISALEMLLPLLTDKKIFSASGK--AHLPDLFKFNQNVNESYILNPTCEEIVSELLASY 59 Query: 122 IK-SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+NLP FYQI KFRDE RP++G++RS+EF+MKD Y FD T E S +Y ++ Sbjct: 60 TQMSYKNLPCRFYQISSKFRDEKRPKYGLLRSKEFIMKDLYCFDSTFESSMMTYEEVKNK 119 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDF 239 Y F+ LG+ + ++ G IGG S EF +AD G+ V C K + + Sbjct: 120 YKEFFNNLGIPYVVVKGTEGDIGGLKSDEFYFMADVGDNNLVLCQK--------CGHKEC 171 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + LN V DV K+F +GIEVGH F GTKYS + Sbjct: 172 IEFVKLNDQV----CSNCQNGDV---KIF-----------KGIEVGHTFQIGTKYSKIFN 213 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + V+M +G+G R++AA +E I WP S+ P+++ LI K + Sbjct: 214 TNYLSKDNEKIPVEMCCFGLGLTRILAASVEVLSSFNEIRWPHSIVPYQVCLIPPKKNSI 273 Query: 360 VCR---DACEKIYARLSKV-GCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 R D ++ L + G D+ DD IG + LG P +I+G + + Sbjct: 274 EERQGGDIVNILFNELYRTFGNDLVVDDRTSMTIGKRIQSIKELGLPFAIIIGKDIIKN 332 >gi|46108902|ref|XP_381509.1| hypothetical protein FG01333.1 [Gibberella zeae PH-1] Length = 548 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 123/211 (58%), Gaps = 1/211 (0%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 + H+ ++R G + Q GI+ LPLG + D + +I + + GA +S+ T+ S +L Sbjct: 1 MVGHEKLIRGGFLRQAHSGIFQLLPLGLRVQDKIEKLIDKHMHSVGASRLSLSTISSEEL 60 Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 W S R DS E+ RL DR D +I PTHEE +T + + SY++LP YQI K+ Sbjct: 61 WRRSNRLDSVAPELFRLKDRKDTPLILSPTHEEEITTLVAGIVNSYKDLPIRLYQITRKY 120 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE RPR G++RSREFLMKD Y+FDLT + +Y ++ +Y F L L + A S Sbjct: 121 RDERRPRHGLLRSREFLMKDLYTFDLTTSEAVETYRQVSGAYRAFFAELKLPYLIAEASS 180 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 G +GGDLSHE+ + + GE V S D D+ Sbjct: 181 GDMGGDLSHEYHLPSAVGEDSVV-SCDSCDY 210 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 23/179 (12%) Query: 280 RGIEVGHIFYFGTKYSLPMSATF-------------KG-ADGKDHYVQMGSYGIGAMRVV 325 + +E GH F GT+YS+P+ A +G G VQMG +G+G R+ Sbjct: 368 KALECGHTFQLGTRYSVPLDACVDLPRSGLPEAAVEEGLTPGSRVPVQMGCHGVGVSRIF 427 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK-----VGCDVF 380 AV E D +G+ WP ++APF++++I D IY LSK G DV Sbjct: 428 GAVAEILADERGLNWPRAIAPFEVTIIPSNG----LADEPLDIYDTLSKNNGSQSGFDVV 483 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD G + AD++G+P+ VI+G F + E++ R +++++ ++E+ + S Sbjct: 484 LDDRKRSFGWKMKDADMVGYPVLVILGKSFKENGTCEVQCRRLSVKDNVKVDELPEFIS 542 >gi|329942565|ref|ZP_08291375.1| prolyl-tRNA synthetase [Chlamydophila psittaci Cal10] gi|332287196|ref|YP_004422097.1| prolyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|313847792|emb|CBY16782.1| prolyl-tRNA synthetase [Chlamydophila psittaci RD1] gi|325506498|gb|ADZ18136.1| prolyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|328815475|gb|EGF85463.1| prolyl-tRNA synthetase [Chlamydophila psittaci Cal10] gi|328914444|gb|AEB55277.1| prolyl-tRNA synthetase [Chlamydophila psittaci 6BC] Length = 577 Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 86/226 (38%), Positives = 134/226 (59%), Gaps = 2/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F + ++A + S++L+ + G I + +KGIY++ PL + + IIREE Sbjct: 1 MKTSQLFYKTSKNANKEASVLSYELLEKAGYIFKTAKGIYTYTPLFWRVARKMMEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML--RLADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P L A+LW ++GR++++ E L L DR DK PTHEE+++ Sbjct: 61 LNAIGGQELVLPILHPAELWQKTGRWEAFRSEGLLYTLKDREDKEFCLAPTHEEIVSLFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + ++LP YQI KFRDE+RPRFG+MR++EFLM+D+Y+F +PE Y K+ Sbjct: 121 SQWLSGRKHLPLHLYQIATKFRDEIRPRFGLMRAKEFLMEDSYTFSDSPEQMNKQYAKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 +Y IF RL ++ + + A+ G IG S EF VL+ GE + S Sbjct: 181 QAYQNIFDRLDIQYVIVEADGGKIGKGKSEEFHVLSSLGEDTICVS 226 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/141 (39%), Positives = 81/141 (57%), Gaps = 1/141 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 G+EV HIF GT+Y+ F+ GK MG+YGIG R +AA IE D +GI+W Sbjct: 408 GVEVAHIFNLGTRYTECFEVVFQDEQGKPQSCWMGTYGIGIGRTLAACIEQLADDRGIVW 467 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P ++APF I+++ D C +A EKIY L G DD E++G + +DL+G Sbjct: 468 PKAIAPFDITIL-YNGGDATCEEAAEKIYKELQCHGYAPLLDDRNERLGFKLKDSDLIGI 526 Query: 401 PLQVIVGSKFVSDSKVEIKHR 421 P ++I+G F++ +EI+ R Sbjct: 527 PYKLILGKTFLNSGMLEIESR 547 >gi|310793744|gb|EFQ29205.1| prolyl-tRNA synthetase [Glomerella graminicola M1.001] Length = 566 Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 3/211 (1%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 ++R G + Q GI+ LPLG++ D + +I GA +++ T+ S DLW +SGR Sbjct: 5 LIRAGFLRQSHSGIFHLLPLGRRVQDKLEHVIDYYMQDLGASRVALSTITSKDLWQKSGR 64 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 E+ DR + PTHEE +T + +KSY+ LP YQI KFRDELRP Sbjct: 65 LSQLEPELFSFDDRRGAKYMLSPTHEEEITTLVAKTVKSYKELPLRLYQITRKFRDELRP 124 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 R+G++R+REF MKD Y+FD + E + +YNK+ +Y +F+ L L + RA SG +GGD Sbjct: 125 RYGLLRTREFTMKDLYTFDASAEAALETYNKVQSAYAGVFNALKLPVLVARASSGDMGGD 184 Query: 206 LSHEFIVLADTGE-TQVFCSKDFMDFPIPSE 235 LSHE+ + GE T V CSK D+ + +E Sbjct: 185 LSHEYHLPTTIGEDTVVTCSK--CDYTVNAE 213 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 10/161 (6%) Query: 281 GIEVGHIFYFGTKYSLPMSATFK--------GADGKDHYVQMGSYGIGAMRVVAAVIESS 332 +EVGH F+ GT+YS P+ A G K +QMG +GIG R++ AV+E Sbjct: 392 ALEVGHTFHLGTRYSEPLGAVISVPEDNGRSGTSEKTTLMQMGCHGIGVSRLIGAVVEHL 451 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV-GCDVFWDDMGEQIGSQ 391 D KG+ WP +AP++ +I++ D+ ++I A D DD + + Sbjct: 452 ADSKGLQWPRVIAPYEAVVISVTDLDKEAVKVYDEITAYSKDFDAVDAVLDDRSVSLAWK 511 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKV-EIKHRLTGIREDMSL 431 ADL+G+P+ +++G + + + E++ R GI+E + L Sbjct: 512 LKDADLVGYPVLIVLGKVWKKQTGICEVQCRRLGIKETVPL 552 >gi|170592483|ref|XP_001900994.1| probable proline-trna synthetase - fission yeast [Brugia malayi] gi|158591061|gb|EDP29674.1| probable proline-trna synthetase - fission yeast, putative [Brugia malayi] Length = 396 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 117/386 (30%), Positives = 197/386 (51%), Gaps = 41/386 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H+ S + L + ++ +D + +I E N GA ++S+P L + ++W ++GR+ ++ Sbjct: 3 VHRASTMLLGSLDV-KRIIDKLIKVIETELNAIGAYKISMPILGAKEMWQKAGRWSAFES 61 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL-PFTFYQIQLKFRDELRPRFGVM 150 EM L+D+ ++ PTHEE++T + + + + P YQ+ KFRDE G + Sbjct: 62 EMFHLSDKTNQIYCLQPTHEEMVTKLVAEQGELRQAVYPLMLYQMGPKFRDETVVGHGFL 121 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH-RLGLKSIPMRAESGPIGGDLSHE 209 RSREFLM D YSFDLT + + +Y+ + +Y RIFH RLG+ +RA++G IGGD+SHE Sbjct: 122 RSREFLMNDLYSFDLTEQNASDTYSLVSKTYQRIFHDRLGINFYIVRADAGNIGGDMSHE 181 Query: 210 FIVLADTGETQV-FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + + TG + +CSK + N D ++++ P + K + Sbjct: 182 YHLPCKTGRDSIAYCSKCNLGM-----NHD---------LLKRGEKPCCCS------KEY 221 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 S+ E IE+ H F G ++ GA + + M +GIG R++AA+ Sbjct: 222 ISIVET-------IEIAHTFQLGDLFTKKF-----GAKHDNQPLIMNCFGIGIGRLIAAI 269 Query: 329 IES-SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC---DVFWDD- 383 I+S S K + P ++ PFK+++I + E I LS++ D+F DD Sbjct: 270 IDSMSPSTKALRLPYALVPFKVAVILPNKTQSETMEFAENIIGHLSQISSVQNDIFVDDR 329 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSK 409 + IG + A LG P +VG++ Sbjct: 330 LDNSIGRRLLTAANLGIPHIFVVGNR 355 >gi|254569756|ref|XP_002491988.1| Protein with similarity to tRNA synthetases [Pichia pastoris GS115] gi|238031785|emb|CAY69708.1| Protein with similarity to tRNA synthetases [Pichia pastoris GS115] gi|328351517|emb|CCA37916.1| prolyl-tRNA synthetase [Pichia pastoris CBS 7435] Length = 564 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 2/204 (0%) Query: 19 EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD 78 ++ +H ++L++ I+Q + GI WLPLG + + +IR+ ++ G +EM + +L S Sbjct: 28 DLTTHDMLLQSRFIYQPAAGIVHWLPLGLRTYKKLQNVIRKRMDQAGGLEMELSSLSSKH 87 Query: 79 LWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 LW + R+D+ E+ + D D+ PT EE +T++ SY++LP YQI K Sbjct: 88 LWERTKRWDN--NELFKFKDSKDRDYCLVPTCEEEITNLVGDLCSSYKDLPLLVYQISRK 145 Query: 139 FRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE 198 +RDELRPR G++R REFLMKDAYSFDLT E SY+ + +Y RIF L L A+ Sbjct: 146 YRDELRPRGGLLRGREFLMKDAYSFDLTKEDGLKSYDNVNEAYRRIFQDLKLPVTVANAD 205 Query: 199 SGPIGGDLSHEFIVLADTGETQVF 222 SG IGGDLS E+ ++ ++GE +F Sbjct: 206 SGSIGGDLSLEYHLIHESGEDILF 229 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 68/130 (52%), Gaps = 3/130 (2%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 IEVGH FY KYS P+ T + V MG YGIG R++AA+ ++S D G+ W Sbjct: 377 AIEVGHTFYLDKKYSSPLDCTVVNEQNEQTTVYMGCYGIGVSRLIAAIAQTSRDEVGLTW 436 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P +AP++I+L++ K + D +I LS V D +G + + + G Sbjct: 437 PQIIAPYQITLLSNKTSSKKNLDTVTEI---LSSFDVQVDNRDGKFSMGHKLKQSKVAGI 493 Query: 401 PLQVIVGSKF 410 PLQ+IVG F Sbjct: 494 PLQIIVGKHF 503 >gi|330444263|ref|YP_004377249.1| prolyl-tRNA synthetase [Chlamydophila pecorum E58] gi|328807373|gb|AEB41546.1| prolyl-tRNA synthetase [Chlamydophila pecorum E58] Length = 577 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 88/229 (38%), Positives = 133/229 (58%), Gaps = 3/229 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F L+ +DA + S++L+ + G + + KGIY++ PL + + IIREE Sbjct: 1 MRTSQLFYRTLKHTKKDA-VLSNELLEKAGYLWRIGKGIYTYTPLLWRVVLKFMEIIREE 59 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML--RLADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P L A+ W+++GR+ ++ E L L DR K PTHEE+++ + Sbjct: 60 LNAIGGQELLLPILHPAEYWLQTGRWHAFVSENLLYHLIDREGKEHCLAPTHEEIVSALL 119 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + + LP YQ+ KFRDE+RPRFG++RSRE LM+D+Y+F +PE Y K+ Sbjct: 120 AQWLSGKKQLPLHLYQMAPKFRDEIRPRFGLIRSRELLMEDSYTFSDSPEQMDEQYQKLR 179 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++Y +IF RLGL + A+ G IG S EF VL GE + S D+ Sbjct: 180 MAYSKIFDRLGLAYAIVNADGGKIGKGKSEEFQVLCSLGEDTICVSGDY 228 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 5/183 (2%) Query: 269 DSLPENKRVSAR---GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 D P N V + GIEV HIF G +Y+ ATF+ +GK+ MG+YGIG R + Sbjct: 392 DLCPVNPDVPYKIFQGIEVAHIFNLGIRYTESFQATFQDEEGKERPCWMGTYGIGIGRTL 451 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 AA +E D +GI+WP+ +APF IS++ D +Y L + GC+ DD Sbjct: 452 AACVEQLSDSRGIVWPEIIAPFSISIL-YNGGDTPSEQVAYSLYQDLQQQGCEPLLDDRD 510 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 E++G + +DL+G P ++I+G + + +EI+ R +G + + E I+++ Sbjct: 511 ERLGFKLKDSDLIGIPYKLIIGKAYHASGILEIESR-SGEKFSVPPENFISWSHEHLPRF 569 Query: 446 RPV 448 R + Sbjct: 570 RRI 572 >gi|256075323|ref|XP_002573969.1| prolyl-tRNA synthetase [Schistosoma mansoni] gi|238659161|emb|CAZ30202.1| prolyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 472 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 129/445 (28%), Positives = 205/445 (46%), Gaps = 45/445 (10%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 S KL+ G+I S G+Y++ P ++L + +++ + GA + +PTL +W Sbjct: 26 VSQKLLRLYGLIFSDSTGVYAFGPEVLRSLRKLESLVDNSMLQLGAQRVLLPTLGPRHIW 85 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 +SGR+ + + R+ DR PTHEE +T+ SY++LP YQI KFR Sbjct: 86 EKSGRWSTMQSSLFRVKDRLSHEYCLQPTHEEYITNFVACLNLSYKSLPVLVYQITSKFR 145 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 DE P+ G++R REFLM+D Y+FD + E ++ +Y ++ +Y + L L + A+ G Sbjct: 146 DEPHPKHGLVRGREFLMQDIYTFDASVETAEKTYKRVKTAYSDLMVNLELPYLVACADPG 205 Query: 201 PIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 +GG +S EF V AD GE ++ CSK + F N++ + I Q P Sbjct: 206 NVGGLISEEFHVEADIGEDRILTCSKCSLKF-----NSELEGIYHYEGNYLQVKLPAP-- 258 Query: 260 SDVHNEKLFDSLPEN-KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 S+P N + + +V H F G +YS AT++ G + MG YG Sbjct: 259 ----------SVPYNLAQKYSMKFKVAHCFLLGERYSKCFDATYRSPSG-SKLMFMGCYG 307 Query: 319 IGAMRVVAAVIE----------SSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACE 366 +G R++A IE S + WP +AP+ +++ K A D V D + Sbjct: 308 LGISRLLAVCIEHLTRVAFPDKSKDQITQLRWPVRIAPYSGAIVLQKEMAKDSVNPDELK 367 Query: 367 KIYARLS------KVGCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 I + K+ D+ DD MG +G + LG P + V S+ D E Sbjct: 368 YILDTIQSDSINFKLPGDILVDDRMGLSLGRKILDQSRLGIPWILTVKSQ--RDGTYE-- 423 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 L + +D S + A F+N Sbjct: 424 --LIDVYKDRSCVATLEQARSAFNN 446 >gi|302925353|ref|XP_003054078.1| hypothetical protein NECHADRAFT_89892 [Nectria haematococca mpVI 77-13-4] gi|256735019|gb|EEU48365.1| hypothetical protein NECHADRAFT_89892 [Nectria haematococca mpVI 77-13-4] Length = 548 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 121/206 (58%), Gaps = 1/206 (0%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 + H ++R G + Q GI+ LP+G + D + ++ + + GA +S+ T+ S +L Sbjct: 1 MVGHGKLIRGGFLRQAHSGIFQLLPMGLRVQDKIEKLLDKHMHSVGASRLSLSTISSEEL 60 Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 W S R D E+ RLADR + +I PTHEE +T + +KSY++LP YQI K+ Sbjct: 61 WRRSDRLDRVAPELFRLADRKEVPLILSPTHEEEITTLVAGTLKSYKDLPIRLYQITRKY 120 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE RPR G++RSREFLMKD Y+FDLT + +Y + +Y F L L + A S Sbjct: 121 RDERRPRHGLLRSREFLMKDLYTFDLTTAAAIETYRLVSAAYRAFFSELKLPYLVAEASS 180 Query: 200 GPIGGDLSHEFIVLADTGE-TQVFCS 224 G +GGDLSHE+ + + GE T V C+ Sbjct: 181 GDMGGDLSHEYHLPSAVGEDTVVNCN 206 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 15/175 (8%) Query: 280 RGIEVGHIFYFGTKYSLPMSATF--------KGAD------GKDHYVQMGSYGIGAMRVV 325 R +E GH F+ GT+YS+P+ A K A G VQMG +G+G R+ Sbjct: 368 RALECGHTFHLGTRYSVPLDACVFLPQSELPKVAKEEGLKPGSRVPVQMGCHGVGVSRIF 427 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA-RLSKVGCDVFWDDM 384 AV E D +G+ WP ++APF++++I D+ + + + A S+ G DV DD Sbjct: 428 GAVAEILADERGLNWPRAIAPFEVAVIPTPGLDKESIEIYDNLVAGSSSQPGLDVVLDDR 487 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 + G + AD++G+P+ VI+G F E++ R ++E++ LEE+ + S Sbjct: 488 KQSFGWKMNDADIVGYPVVVILGKAFKQGRLCEVQCRQLSVKENVKLEELPRFIS 542 >gi|62184882|ref|YP_219667.1| prolyl-tRNA synthetase [Chlamydophila abortus S26/3] gi|81312944|sp|Q5L6M5|SYP_CHLAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|62147949|emb|CAH63696.1| prolyl-tRNA synthetase [Chlamydophila abortus S26/3] Length = 577 Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 85/226 (37%), Positives = 133/226 (58%), Gaps = 2/226 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F + ++A + S++L+ + G I + +KGIY++ PL + + IIREE Sbjct: 1 MKTSQLFYKTSKNANKEASVLSYELLEKAGYIFKTAKGIYTYTPLFWRVALKMMDIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML--RLADRNDKAMIYGPTHEEVMTDIF 118 N G E+ +P L A+LW ++GR++++ E L + DR DK PTHEE+++ Sbjct: 61 LNAIGGQELVLPILHPAELWQKTGRWEAFRSEGLLYTVKDREDKEFCLAPTHEEIVSMFV 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + + LP YQI KFRDE+RPRFG+MR++EFLM+D+Y+F +PE Y K+ Sbjct: 121 SQWLSGRKQLPIHLYQIATKFRDEIRPRFGLMRAKEFLMEDSYTFSDSPEQMNEQYAKLR 180 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 +Y IF RL ++ + + A+ G IG S EF VL+ GE + S Sbjct: 181 QAYQNIFDRLEIQYVIVEADGGKIGKGKSEEFHVLSSLGEDTLCVS 226 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 1/141 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 G+EV HIF GT+Y+ F+ GK MG+YGIG R +AA IE D +GI+W Sbjct: 408 GVEVAHIFNLGTRYTEGFDVVFQDEQGKPQSCWMGTYGIGIGRTLAACIEQLADDRGIVW 467 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P ++APF IS++ D C +A EKIY L G DD E++G + +DL+G Sbjct: 468 PKAIAPFDISIL-YNGGDTACEEAAEKIYKELQGYGYAPLLDDRNERLGFKLKDSDLIGI 526 Query: 401 PLQVIVGSKFVSDSKVEIKHR 421 P ++I+G F++ +EI+ R Sbjct: 527 PYKLILGKTFLNSGMLEIESR 547 >gi|170070377|ref|XP_001869557.1| prolyl-tRNA synthetase [Culex quinquefasciatus] gi|167866293|gb|EDS29676.1| prolyl-tRNA synthetase [Culex quinquefasciatus] Length = 489 Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 88/228 (38%), Positives = 137/228 (60%), Gaps = 8/228 (3%) Query: 2 RRSKYFLP--ILQENP----RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDN-VN 54 R +K F P I+ +N +D S +LML G+I Q G + +PL Q++L V+ Sbjct: 3 RLTKIFQPTLIVPKNAVVKNQDVTSKSQRLMLEQGLIRQAGNGTFYLMPLLQRSLQKAVD 62 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 + Q A ++++P L +A LW +SGR +S G E++R DR+ K I GPTHEE + Sbjct: 63 LVDHFMQRHASAQKLTLPILTAASLWRQSGRLESAGPELMRTTDRHGKQQILGPTHEESI 122 Query: 115 TDIFRS-HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + S SYR P YQI KFRDE++PRFG+MR++EFLMKD Y+FD+ ++ + Sbjct: 123 TALVASISPVSYRAFPLRLYQISTKFRDEMKPRFGLMRAKEFLMKDLYTFDVGRGEARET 182 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 Y ++ +Y ++F +G+ + +R ++G IGG SHE+ ++ GE Q+ Sbjct: 183 YEEVNEAYRKLFDAVGVGYVKVRGDTGTIGGSESHEYHFPSEVGEDQL 230 >gi|325188965|emb|CCA23493.1| prolyltRNA synthetase putative [Albugo laibachii Nc14] Length = 620 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 87/224 (38%), Positives = 128/224 (57%), Gaps = 3/224 (1%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 RS+ ++P L+ P +A + S++L+LR G I + G ++ LPL + L + II E Sbjct: 18 RSRVWIPTLKAAPIEAAVPSYQLLLRAGFIRKSGHGTFAMLPLATRVLQKLEDIIDTEME 77 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + + +P + S+DLW S R+ S E+ DR + I PTHEE MT + H Sbjct: 78 KINGNKCDLPAIVSSDLWKLSDRWRSRTSELFTFRDRRNNEQILAPTHEEPMTALVAQHH 137 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 S YQI K+RDE+RPRFG++R+REF+MKD YSFD + +Y+ + SY Sbjct: 138 NSTHE-SLRLYQIGKKYRDEVRPRFGLLRAREFIMKDMYSFDTNYSNAVTTYDAVIGSYK 196 Query: 183 RIFHR-LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CS 224 RI + L L + ++A++G IGG+ SHEF VLA GE + CS Sbjct: 197 RILQQILRLPVVQVQADTGDIGGNFSHEFHVLASVGEDGILSCS 240 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/186 (32%), Positives = 103/186 (55%), Gaps = 24/186 (12%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATF----KGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 ++RGIEV H FY G +YS M+A +G+ K+ Y +MG +G+G R++AA++E+SH Sbjct: 438 ASRGIEVAHAFYLGQRYSNSMNALHSRISEGSVVKEPY-EMGCFGLGVSRLLAAIVETSH 496 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRD-----ACEKIYARLSKV----------GCD 378 D GI WP +AP+ I ++ I A C D KI A+LS++ Sbjct: 497 DKNGIQWPGVIAPYHIIVLAIGA---TCVDHPLAIGANKIAAQLSQMPFVASSTLSGSVH 553 Query: 379 VFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD + G + ++L+G+P +V++G ++ + VE+++RLT + + EE+ Y Sbjct: 554 VILDDRWQTSAGVKLVESELIGYPYRVVIGKQYATARLVEVQNRLTMEKTFIKPEELPAY 613 Query: 438 ASHRFS 443 +F+ Sbjct: 614 FEDQFA 619 >gi|330930995|ref|XP_003303228.1| hypothetical protein PTT_15359 [Pyrenophora teres f. teres 0-1] gi|330938329|ref|XP_003305730.1| hypothetical protein PTT_18645 [Pyrenophora teres f. teres 0-1] gi|311317156|gb|EFQ86197.1| hypothetical protein PTT_18645 [Pyrenophora teres f. teres 0-1] gi|311320895|gb|EFQ88675.1| hypothetical protein PTT_15359 [Pyrenophora teres f. teres 0-1] Length = 529 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 87/241 (36%), Positives = 139/241 (57%), Gaps = 15/241 (6%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 SH L++R G + Q G++ LPLG + + + +I + N GA ++S+ ++ + LW Sbjct: 23 SHSLLVRGGFLRQAHSGVFHLLPLGLRVQNKLEGLIDKHMNSIGASKVSLSSITTEALWQ 82 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 +SGRY S E+LR+ DR + + PTHEE +T + S + SY++LP YQI K+RD Sbjct: 83 QSGRY-SANSELLRIKDRRESGFLLSPTHEEEITALVASMVHSYKDLPLRLYQIGRKYRD 141 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 E RPR G++R++EF+MKD Y+FD +P+ + +Y + +Y +F+ L L + A+SG Sbjct: 142 ERRPRGGLLRAKEFVMKDLYTFDSSPKAALETYESVRQAYNNLFNELKLPYLVADADSGN 201 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAA-TS 260 +GG LSHE+ + GE VF + D ++ +VE+ T P A+ TS Sbjct: 202 MGGKLSHEYHFASPKGEDYVFSCQSC-------------DYVANEELVEKKTDPAASKTS 248 Query: 261 D 261 D Sbjct: 249 D 249 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 7/187 (3%) Query: 254 APYAATSDVHNEKLFDSLPE---NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK-D 309 AP + D+ K D P K + IEVGH F+ GT+YS+P++A D Sbjct: 333 APSTCSVDITLTKPGDPCPRCSTGKLNIQKAIEVGHTFHLGTRYSVPLNAVIALPDQNLS 392 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK-ISLINIKAHDQVCRDACEKI 368 MG +GIG R++ AV D +G+ WP +AP++ I L + K ++ + + + Sbjct: 393 SPTHMGCHGIGVSRIIGAVASLLSDARGLNWPRVIAPYEAIVLSDPKTEEKDTTEVYDAL 452 Query: 369 YARLSKVGCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + D+ DD G+ +G + ADL+G+P+ V++G + D +VEI+ R G+++ Sbjct: 453 HGEGRNSDIDLVLDDRAGKSLGWKLKDADLIGYPVVVVMGRSW-KDKRVEIQCRRLGVKK 511 Query: 428 DMSLEEV 434 D+ L E+ Sbjct: 512 DVELNEL 518 >gi|315185841|gb|EFU19606.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6578] Length = 589 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 146/276 (52%), Gaps = 16/276 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F L+ PR+ E + L+++ G + +G+YS+LPLG + + +I E Sbjct: 25 MRYSQLFPHTLRTLPREHEGTPYGLLVKGGYVRGLGQGLYSFLPLGLRVFYKLKRLIAGE 84 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G E+ VP + +LW SGR G ++++ +DR + M+ PTHEE M ++ R Sbjct: 85 MKRLGGQEVLVPLVNPMELWERSGRDLLVGGDLVKFSDRAGRQMVISPTHEEAMVELLRQ 144 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQ Q K+RDE R R G++RSREF+MKD YSF T + + K+F + Sbjct: 145 SMRSYRMLPVFLYQFQTKYRDEERVRIGLLRSREFIMKDGYSFHRTYADLNNFFPKVFHA 204 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF--------CSKDF----- 227 Y R+F + I A G +GG+ S+EF+V ++ G+ V ++D Sbjct: 205 YERVFRTCNVPYIVAEAGVGYMGGERSYEFLVPSERGDNVVIRCPSCGYTANQDIAIGIK 264 Query: 228 ---MDFPIPSENTDFDDIISLNSIVEQWTAPYAATS 260 P+P E + +S++ +V + P + + Sbjct: 265 PLRTQIPLPMEEVETPGCVSMDDLVVHLSVPKSGLA 300 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 4/169 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R +E+GHIF G YS M +F G++ + MGSYGIG R+++ ++E++ D GI+ Sbjct: 425 RAVEIGHIFKLGDFYSQRMGLSFFDERGREIHPYMGSYGIGMGRLISMIVETNSDEHGIV 484 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP VAPF + L++I + R K+ A +G DD G +F ADLLG Sbjct: 485 WPPQVAPFMVFLMSIGNSLSMKR----KLEALAEALGDRALLDDRHLSPGRKFLDADLLG 540 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 P ++++ + + + KVE+K R TG ++ + V ++ + PV Sbjct: 541 IPYRILLTQELLEEGKVEVKERTTGKVWKLAYQRVEDFVHYLEEQYGPV 589 >gi|302340220|ref|YP_003805426.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] gi|301637405|gb|ADK82832.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] Length = 562 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 84/222 (37%), Positives = 128/222 (57%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR F L+ P+D + +LR G I G+YS+LPLG K ++ + IIREE Sbjct: 1 MRYRHLFGKTLRSTPQDVKSEGLSFLLRGGFIRPLGHGLYSYLPLGVKVVEKLRKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+SVP + AD+W SGR + M+R +DR+ + + P+HEE ++ R Sbjct: 61 MDRLGGQEVSVPLVNPADIWKRSGREHLIDRAMIRFSDRSGRRYVLSPSHEEAFVELARY 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR+ P +Q Q KFRDE R R G++R +EF MKDAYSF + + + KMF + Sbjct: 121 GLRSYRDFPVLLFQFQRKFRDEERVRQGLVRLKEFEMKDAYSFHRSATALNNFFPKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 Y RIF R GL + + G + G+ ++EF++ ++ G+ V Sbjct: 181 YERIFSRCGLDILTAESGVGYMRGEKAYEFLLPSNLGDDVVM 222 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 89/157 (56%), Gaps = 4/157 (2%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + R IE+G+IF G Y+ M F+ +GK Y MGSYGIG R++ A+ E+ D +G Sbjct: 399 AVRAIELGNIFKLGDFYARGMELVFREENGKRLYPHMGSYGIGIDRLLGAIAETKRDERG 458 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 ++WP S+AP++ L+ I V R+ E++YA +S+ D DD E G +F ++L Sbjct: 459 LLWPPSLAPYRFFLMGIGKGASVRRE-VEQLYASISE---DTLIDDRSESPGVKFKDSEL 514 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G P ++++ + + + + E+ R R + L ++ Sbjct: 515 MGIPWRIVISASTLEEGRAELYDRRADRRRLVPLADI 551 >gi|307717987|ref|YP_003873519.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] gi|306531712|gb|ADN01246.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] Length = 577 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 93/285 (32%), Positives = 147/285 (51%), Gaps = 19/285 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F L+ PR+ E + L+++ G + +G+YS+LPLG + + +I E Sbjct: 13 MRYSQLFPHTLRTLPREHEGTPYGLLVKGGYVRGLGQGLYSFLPLGLRVFYKLKRLIAGE 72 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G E+ P + +LW SGR G ++++ +DR + M+ PTHEE M ++ R Sbjct: 73 MKRLGGQEVLAPLVNPMELWERSGRDLLVGGDLVKFSDRAGRQMVISPTHEEAMVELLRQ 132 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQ Q K+RDE R R G++RSREF+MKD YSF T + + K+F + Sbjct: 133 SMRSYRMLPVFLYQFQTKYRDEERVRIGLLRSREFIMKDGYSFHRTYADLNNFFPKVFHA 192 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF--------CSKDF----- 227 Y R+F + I A G +GG+ S+EF+V ++ G+ V ++D Sbjct: 193 YERVFRTCNVPYIVAEAGVGYMGGERSYEFLVPSERGDNVVIRCPSCGYTANQDIAIGIK 252 Query: 228 ---MDFPIPSENTDFDDIISLNSIVEQWTAP---YAATSDVHNEK 266 P+P E + +S++ +V + P A T H K Sbjct: 253 PLRTQIPLPMEEVETPGCVSMDDLVTHLSVPKSGLAKTMAYHTGK 297 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 4/169 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R +E+GHIF G YS M +F G++ + MGSYGIG R+++ ++E++ D GI+ Sbjct: 413 RAVEIGHIFKLGDFYSQRMGLSFVDERGREIHPYMGSYGIGMGRLISMIVETNSDEHGIV 472 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP VAPF + L++I + R K+ A +G DD G +F ADLLG Sbjct: 473 WPPQVAPFMVFLMSIGNSLSMKR----KVEALAEALGDRALLDDRHLSPGRKFLDADLLG 528 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 P ++++ + + + KVE+K R TG ++ + V ++ + PV Sbjct: 529 IPYRILLTQELLEEGKVEVKERSTGKVWKLAYQRVEDFVHYLEEQYGPV 577 >gi|315641198|ref|ZP_07896275.1| proline--tRNA ligase [Enterococcus italicus DSM 15952] gi|315482965|gb|EFU73484.1| proline--tRNA ligase [Enterococcus italicus DSM 15952] Length = 556 Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 128/224 (57%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S +P L+E P +A++ SH+L++R G I Q + G+Y++LPL Q+ + + AII++E Sbjct: 1 MKQSHLLVPTLRETPSEADVRSHQLLVRAGYIRQIATGVYAYLPLAQRVMKKITAIIKDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA EM +P + D W + + ++DRN + + P+ E+ ++ R+ Sbjct: 61 LDAIGANEMQMPNILPMDYWQDDACRRLCTSSLFEVSDRNQRQYMLAPSQEKAFIELVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQ+Q+K+RDE +P+FG + SREFLM D YSF + +Y ++ S Sbjct: 121 EVQSYRKLPLKLYQVQMKYRDEKKPKFGFLYSREFLMTDFYSFHAGAVSLEQTYQQVESS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 I R GL + + +G + EF+ LA G+ Q+ S Sbjct: 181 IKTILARCGLTYHLVLGHTNRVGIEKVKEFMALASFGDEQLCLS 224 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 1/156 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +G+++GH+ +YS +SA F G+ ++ IG R+++ ++E D I Sbjct: 391 KGLKIGHMMTMSKEYSQALSAQFIDETGQAVPTRICYCSIGVSRLLSLIVEQHCDENKIQ 450 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP++VAPF ++ I D + ++I ++ + +V DD E+ G +FA ADL+G Sbjct: 451 WPNTVAPFDAHVVPIDYQDSDQQQLTDEIVEQMEQAEYEVLLDDRVERAGVKFADADLIG 510 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 P+++ +G K + VEIK +G ++ EE++ Sbjct: 511 CPIRITIGKK-AKEGIVEIKLHQSGDSLEIRKEELV 545 >gi|329569947|gb|EGG51702.1| proline--tRNA ligase [Enterococcus faecalis TX1467] Length = 516 Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 78/170 (45%), Positives = 105/170 (61%) Query: 57 IREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTD 116 +REE + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T+ Sbjct: 1 MREEFEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTE 60 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + R I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY Sbjct: 61 LIRDEINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRD 120 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 +Y RIF R GL+ + + G +GG S EF+ +++ GE + S + Sbjct: 121 YEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTE 170 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 3/168 (1%) Query: 269 DSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ V A +GIE+GHIF GT+YS M AT +G++ V MG YGIG R+++ Sbjct: 335 DPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLS 394 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++E + D +GI WP +APF + ++ + D+ +++ A +++ G +V DD E Sbjct: 395 AIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNE 454 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ Sbjct: 455 RAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEEL 501 >gi|254578182|ref|XP_002495077.1| ZYRO0B02794p [Zygosaccharomyces rouxii] gi|238937967|emb|CAR26144.1| ZYRO0B02794p [Zygosaccharomyces rouxii] Length = 564 Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 86/229 (37%), Positives = 128/229 (55%), Gaps = 3/229 (1%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG-AIEMSVPTLQSAD 78 + +H+L G I Q G+ WLP+G + L+ V +I+R N+ G A+E+S+ L Sbjct: 28 LPTHELFQTLGFIRQSQSGLVHWLPMGLRTLNKVESIVRHRMNQDGDALEVSLSALSPRS 87 Query: 79 LWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 LW ++ R+ G E+ +L D + PT EE +T++ +I SYR++P T YQI K Sbjct: 88 LWEKTNRWS--GTELFKLKDAKKASYCLTPTCEEDITNLMNEYITSYRDMPTTVYQITRK 145 Query: 139 FRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE 198 +RDELRPR G++R REFLMKDAYSF E + ++ KM Y +IF L + + A+ Sbjct: 146 YRDELRPRGGLLRGREFLMKDAYSFASNEEEALQTFQKMNAVYNKIFQDLKIPFVSAWAD 205 Query: 199 SGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 +G IGGDLS E+ L + GE + D + F D + L+S Sbjct: 206 TGDIGGDLSKEYHYLHEGGEDTLLTCDQCGDVSNVEKCESFPDEVGLHS 254 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 82/143 (57%), Gaps = 12/143 (8%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGI 338 + IEVGH F+ GTKYS M + F ++ + + QMG YGIG R+V A+ E + D KG Sbjct: 378 KSIEVGHTFHLGTKYSEAMGSKFTDSNNNSNSIPQMGCYGIGISRLVGAIAEVARDSKGF 437 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYAR--LSKVGCDVFWDDMGEQIGSQFAVAD 396 WP SV+P+ +S+ ++Q+ ++ + I + LS+ F +G +G++ ++ Sbjct: 438 KWPTSVSPYLMSICG--KNEQLVQETRQTIESPDVLSQ-----FNSKLG--LGARIKLSH 488 Query: 397 LLGFPLQVIVGSKFVSDSKVEIK 419 LG PL +IVG K +VE++ Sbjct: 489 ALGIPLAIIVGPKSWPKVEVEVR 511 >gi|50309671|ref|XP_454847.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643982|emb|CAG99934.1| KLLA0E19801p [Kluyveromyces lactis] Length = 549 Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 127/204 (62%), Gaps = 2/204 (0%) Query: 19 EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD 78 ++ +H+L+ + G + Q S G+ WLPLG K L N+ IIR + +GA E+S+ +L Sbjct: 19 QLPTHELLQQLGYVKQASSGVLHWLPLGLKTLRNIEGIIRRRMDESGAHEVSLSSLSQRS 78 Query: 79 LWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 LW +GR+ + E+ +L D K PT EE +T + S++ SY++LP YQI K Sbjct: 79 LWETTGRWSN--TELFKLKDAKKKDYCLVPTCEEEITWLMNSYLTSYKDLPIIAYQITRK 136 Query: 139 FRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE 198 +RDELRPR G++R REFLMKDAYSF L E + ++ ++ +Y +IF +G+ + A+ Sbjct: 137 YRDELRPRGGLLRGREFLMKDAYSFHLNSEDAVSTFERVNATYDKIFTDIGVPFVSAVAD 196 Query: 199 SGPIGGDLSHEFIVLADTGETQVF 222 SG IGGDLS E+ + ++GE +F Sbjct: 197 SGDIGGDLSKEYHFIHESGEDTLF 220 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 6/174 (3%) Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 DV ++ E + SA+ IEVGH FY G KYS ++ATF+ D D ++MG YGIG Sbjct: 349 DVEEGEICAQCEEGELESAKSIEVGHTFYLGKKYSKALNATFRQQDNSDVVMEMGCYGIG 408 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 R++ A+ + + D KG+ WP SV+P+K+S+ A D+ D K+ A L F Sbjct: 409 VSRLIGAIAQVTRDPKGLRWPSSVSPYKVSVC---ASDKSV-DQLNKVKALLDYKPYTDF 464 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 D IG++ + LG P+ ++VG K + ++E++ + S E++ Sbjct: 465 --DAKTSIGAKIQQSHALGIPIAIVVGPKSWPNVEIEVRGNFRSKNWETSYEKL 516 >gi|33636681|gb|AAQ23638.1| AT04665p [Drosophila melanogaster] Length = 335 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 113/336 (33%), Positives = 164/336 (48%), Gaps = 41/336 (12%) Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP +QI KFRDEL+ RFG+MR++EFLMKD YSFD++ E + +Y + +Y R Sbjct: 9 SYRQLPLRLFQIGPKFRDELKTRFGLMRAKEFLMKDMYSFDVSEETAMETYTVVNAAYDR 68 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFDDI 242 +F +L + + + A +G +GG +SHE+ ++ GE + CS F SE Sbjct: 69 LFKQLEVPFVKVNAATGIMGGSVSHEYHYVSPVGEDNLLQCSS--CGFAGNSE------- 119 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + + P +SD+ RG+EV H F G KYS P+ ATF Sbjct: 120 ----VVKAPASCPSCNSSDLKE--------------VRGVEVAHTFLLGDKYSKPLGATF 161 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GK + MG YGIG RV+AA +E + WP +AP+ + LI K + Sbjct: 162 LNTTGKPQSLVMGCYGIGITRVIAAALEVLSSDHELRWPKLLAPYDVCLIGPKQGSKEQP 221 Query: 363 DACEKIYARLSKVG--C---DVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFV--SDS 414 +A L VG C ++ DD E IG + A LG PL ++VG+K V Sbjct: 222 EAEVIENELLLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTIVVGAKSVRLDSP 281 Query: 415 KVEIKHRLTGIREDMSLEE----VINYASHRFSNNR 446 K+E+ H G ++ E V ++ H+ S R Sbjct: 282 KLEV-HTSKGETYELDFSETLKLVAEHSQHKKSLER 316 >gi|156841840|ref|XP_001644291.1| hypothetical protein Kpol_1030p43 [Vanderwaltozyma polyspora DSM 70294] gi|156114930|gb|EDO16433.1| hypothetical protein Kpol_1030p43 [Vanderwaltozyma polyspora DSM 70294] Length = 580 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 88/234 (37%), Positives = 133/234 (56%), Gaps = 9/234 (3%) Query: 1 MRRSKYFLPILQE--NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 +R FLP +++ N + + LM G+IH G +WLPLG ++L + +I Sbjct: 12 LRSLHSFLPKIKKSGNGNIESLQTADLMKHAGLIHGSRSGFINWLPLGLRSLRKLELLIH 71 Query: 59 EE-QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDI 117 + QN GA E+ + T+ DLW +S R+++ KE+ +L D D T EE +T++ Sbjct: 72 NKMQNEAGAYEVKLSTISPKDLWEKSNRWNN--KELFKLKDSKDAQYCLTATCEEDITNL 129 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++I SY+N+P T YQI KFRDE RPR G++R+REFLMKDAYSF + + ++N M Sbjct: 130 MMNYITSYKNMPITVYQIGNKFRDEKRPRGGLLRAREFLMKDAYSFARSKAQAIEAFNNM 189 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF----CSKDF 227 Y +F L + A+SG IGGDLS E+ + +GE +F C++ F Sbjct: 190 NKVYDSLFTELKIPFKSAWADSGDIGGDLSKEYHYIHHSGEDTLFTCDHCNETF 243 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 27/214 (12%) Query: 226 DFMDFPIPS-ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 +F DFP+ +F I ++ I D + +L S E + S + IEV Sbjct: 340 NFPDFPLKKYAKNNFTSITDVSII------------DAIDGELCGSCEEGQLKSDKSIEV 387 Query: 285 GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 GH F+ GTKY+ AT+ + K ++MG YGIG R++ A+ E + D KG WP + Sbjct: 388 GHTFHLGTKYTESFGATYFDENSKPSLIEMGCYGIGVSRLIGAIAEITRDSKGFRWPSVI 447 Query: 345 APFKISL---INI--KAHDQVCRDACEKIYARLSKVGCDVFW---DDMGEQIGSQFAVAD 396 +P+ +S+ +N+ K +Q D + I + + ++F D G IG Q ++ Sbjct: 448 SPYIVSICSQVNVSHKELNQERIDQVKDILYQSPILKNEIFSSFPDKTG--IGKQIELSQ 505 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L+G P VI+GSK + ++E++ GIR D S Sbjct: 506 LIGIPFNVIIGSKSWPNVEIEVR----GIRWDNS 535 >gi|71024203|ref|XP_762331.1| hypothetical protein UM06184.1 [Ustilago maydis 521] gi|46101855|gb|EAK87088.1| hypothetical protein UM06184.1 [Ustilago maydis 521] Length = 735 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 81/213 (38%), Positives = 125/213 (58%), Gaps = 4/213 (1%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D + S +L++R G + S GI++ LP + + + II E+ A +++P L Sbjct: 72 DDPLPSLQLLVRGGYVRSSSSGIFTLLPNALRIVGKITNIIDEQLCAIHASRIAMPNLLP 131 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 + LW ++GRY G E+ +L DR + + GPTHEE +T + + + S R LP YQI Sbjct: 132 SKLWHQTGRYTVMGSELYKLRDRKNSEFVLGPTHEEEITKLVANQVDSDRQLPLRLYQIT 191 Query: 137 LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL-GL--KSI 193 KFRDE RPR G++R++EFLMKD YSFD + + +Y ++ +Y RIF R+ G+ + Sbjct: 192 TKFRDEPRPRMGLLRTKEFLMKDLYSFDKSAADANTTYEEVRAAYARIFDRIFGVDGRWT 251 Query: 194 PMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 A++G IGG+ SHE+ V GE T + CS+ Sbjct: 252 AAEADTGAIGGNKSHEYHVKDPAGEDTLISCSR 284 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 96/245 (39%), Gaps = 79/245 (32%) Query: 254 APYAATSDVHNEKLFDSLPENKRV----SARGIEVGHIFYFGTKYSLPMSATF------- 302 AP D+ + D+ P K ++ IEVGH FY G +YS + A F Sbjct: 473 APPLTLVDIRTAQASDTCPSCKSPHSLQESKAIEVGHTFYLGERYSRTLEAGFLPSHDVA 532 Query: 303 -------KGADGKDHYVQMGSYGIGAMRVV---------------------AAVIESSHD 334 K A+G+ + QMG YGIG R++ +AV Sbjct: 533 EQVSQVHKLANGRVPF-QMGCYGIGVSRILGALAQKAVGDFDRIFHGDAGDSAVASKKRQ 591 Query: 335 GKGIIWPDSVAPFKISLI------------------NIKAH----DQVCRDACEKIYARL 372 G +WP +APF ++ I +H D+ R E+I ++ Sbjct: 592 KAGFVWPSLIAPFTAVIVISDVKDPAKVEAAQIVWDRIVSHARRSDRTIRAVLERISSQR 651 Query: 373 SK-------VGCDVFW----------DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 S+ V D W DD +GS+ A +DL G+ ++IVG F + +K Sbjct: 652 SQPDQATPQVDQDQGWSREEASEIVIDDRTSTLGSKLADSDLTGYAYRIIVGKHFTAQAK 711 Query: 416 VEIKH 420 +E+++ Sbjct: 712 LELQY 716 >gi|312212761|emb|CBX92844.1| similar to prolyl-tRNA synthetase [Leptosphaeria maculans] Length = 610 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 81/222 (36%), Positives = 131/222 (59%), Gaps = 2/222 (0%) Query: 2 RRSKYFLPILQENPRDAEIA-SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 R SK++ P +P+D E SH L++R G + Q G++ LPLG + + A+I + Sbjct: 42 RLSKFWAPTGGISPQDGEQDDSHALLVRGGFLRQAHSGVFHLLPLGLRVQSKLEALIDKH 101 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A ++S+ + + LW +SGRY S E+LR+ DR + + PTHEE +T + S Sbjct: 102 MSSISASKVSLSFITTEALWRQSGRY-SANSELLRINDRKESGFLLSPTHEEEITALVAS 160 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP YQI K+RDE RPR G++R++EF+MKD Y+FD + +Y ++ + Sbjct: 161 TVHSYKDLPLRLYQIGRKYRDERRPRQGLLRAKEFMMKDLYTFDTDANAALKTYEQVRQA 220 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 Y +F L + + A+SG +GG LSHE+ ++ GE V+ Sbjct: 221 YNNLFDELRIPYLVADADSGNMGGKLSHEYHFISPKGEDNVW 262 Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 29/184 (15%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGI 338 R IE+ H F+ GT+YS P+SA F DG + MG +GIG R+V AV D +G+ Sbjct: 416 RAIEIAHTFHLGTRYSDPLSAVFAPRDGTAKLAMHMGCHGIGLSRIVGAVAGLLCDERGL 475 Query: 339 IWPDSVAPFKISLINI---------KAHDQVC---RDACEK---------------IYAR 371 WP +APF+ ++ + +D + RD Sbjct: 476 NWPRVMAPFECVVLGGGGEEGEVAGRVYDGLVFGGRDGAAPGGVDNADATAPAAAAAVDA 535 Query: 372 LSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + D DD G+ +G + ADL+G+P+ V+VG + +VE++ R G++ D+S Sbjct: 536 DTVQPIDTILDDRPGKSLGWKLRDADLIGYPVVVVVGRAWRERGEVEVQCRRLGVKRDVS 595 Query: 431 LEEV 434 + EV Sbjct: 596 VSEV 599 >gi|260949659|ref|XP_002619126.1| hypothetical protein CLUG_00285 [Clavispora lusitaniae ATCC 42720] gi|238846698|gb|EEQ36162.1| hypothetical protein CLUG_00285 [Clavispora lusitaniae ATCC 42720] Length = 565 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 2/207 (0%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 I +H+L+ R + G+ W+P+G L+ + ++ + GA E+S+ L +DL Sbjct: 31 IPTHELLARLQYVSPPKPGLVHWMPMGMLVLNKMKQLVHKHMQDAGAEEISLSALSHSDL 90 Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 W ++GR+ G E+ RL D PT EE +T + + ++ SY+NLP FYQI KF Sbjct: 91 WKQTGRWG--GAELFRLKDSKGAEYCLAPTCEEEVTHLVQQNVASYKNLPLLFYQINTKF 148 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE RPR G++R REF+MKDAYSFD++ + +Y M +Y +F L + A++ Sbjct: 149 RDEKRPRSGLLRGREFVMKDAYSFDVSEAEAMRAYETMSRAYAGVFAALRAPCVRADADT 208 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKD 226 G IGG +SHE+ + GE +F D Sbjct: 209 GEIGGSMSHEWHYVHAAGEDTLFECTD 235 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 40/231 (17%) Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 + DFP+ N ++ +VE A D + S+R IEV Sbjct: 338 NLPDFPVKFANRSLVSTLTDVPLVEAEEGELCAHCDSGTLR-----------SSRAIEVA 386 Query: 286 HIFYFGTKYSLPMSATFK--GADG--KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 H FY G +Y+ + T + GADG V MG YGIG R++AA+ E + D G+ WP Sbjct: 387 HTFYLGDRYTRALDCTVEVPGADGTVSRQPVLMGCYGIGISRIIAALAEINRDSHGLRWP 446 Query: 342 DSVAPFKISLINIKAHDQ---VCR---DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 ++AP+ +++++ A +Q V R D ++ AR S ++G + + Sbjct: 447 AAIAPWHVTVVDAGAQEQAHEVARSLGDMEVRLDARPSV------------RLGRKIRES 494 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTG-----IREDMSLEEVINY-ASH 440 +G PL ++VG ++ + ++E++ R G +R++ S + ++ ASH Sbjct: 495 HAMGIPLVLVVGKRYPT-VEIEVRGRQHGRSWETVRQESSFDWIVETGASH 544 >gi|294654601|ref|XP_456661.2| DEHA2A07678p [Debaryomyces hansenii CBS767] gi|199429004|emb|CAG84617.2| DEHA2A07678p [Debaryomyces hansenii] Length = 576 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 82/203 (40%), Positives = 120/203 (59%), Gaps = 2/203 (0%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 I +H+L + G I+ G+ WLP+G NV+ +I A E+++ L S+ L Sbjct: 40 IPTHELFTKFGFINHPKPGLVHWLPVGLAISQNVSRVIHRRMRECNAEEINLSLLSSSQL 99 Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 W E+GR+D+ E+ +L D + T EE +T + +++ SY+NLP +YQI KF Sbjct: 100 WQETGRWDN--SELFKLKDSSKNDFCLVATCEEEITKLIGANLNSYKNLPLLYYQINEKF 157 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE RPR G++R REFLMKDAYSFDL E + +YNK+ +Y +IF L + + A++ Sbjct: 158 RDEKRPRSGLLRGREFLMKDAYSFDLNEEAAMKTYNKVVDAYYKIFQDLRIPFVKADADT 217 Query: 200 GPIGGDLSHEFIVLADTGETQVF 222 G IGG LSHE+ L GE +F Sbjct: 218 GEIGGTLSHEWHYLHKVGEDTLF 240 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 13/168 (7%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFK--GADGKDHY--VQMGSYGIGAMRVVAAVIESSHDG 335 R IEVGH FY G KYS P+ + DG V MG YGIG R++AA+ E + D Sbjct: 384 RAIEVGHTFYLGDKYSKPLKCEVEVPNQDGSQQLTNVLMGCYGIGISRIIAAIGEINKDS 443 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAV 394 G WP +AP+ ++++ D K+Y L+ DD + +G + Sbjct: 444 TGFRWPSVIAPWNVTVVQSPKFDD---SKGIKVYNLLNAASISYRLDDRSKIGLGKKIKQ 500 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 + ++G PL VI+G++F VE++ R +D+S + + Y S F Sbjct: 501 SHMVGIPLTVILGNQF---PLVEVEIRGRRYTDDLSWKRL--YESRDF 543 >gi|116180206|ref|XP_001219952.1| hypothetical protein CHGG_00731 [Chaetomium globosum CBS 148.51] gi|88185028|gb|EAQ92496.1| hypothetical protein CHGG_00731 [Chaetomium globosum CBS 148.51] Length = 562 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 84/234 (35%), Positives = 129/234 (55%), Gaps = 16/234 (6%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +H ++R G + Q + G++ LPLG + D V ++ L+S LW Sbjct: 27 AHAKLIRAGFLRQSNAGMFHMLPLGNRVQDKVERLVASRMEEL---------LES--LWE 75 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 +SGR D+ E+ R +DR D + PTHEE +T + +KSY+ LP YQI K+RD Sbjct: 76 KSGRLDNVASELFRFSDRRDVPYLLAPTHEEEITTLAARSVKSYKELPLRLYQITRKYRD 135 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 E RPR G++R REF+MKD Y+FD + + + +YN + +Y +IF + L + +A SG Sbjct: 136 EFRPRHGLLRGREFIMKDLYTFDSSVDSALETYNDVRAAYNQIFSDMKLPVLSAKASSGD 195 Query: 202 IGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSE--NTDFDDIISLNSIVEQW 252 +GGDLSHE+ + GE +V CS ++ + E NT D ++ +S E W Sbjct: 196 MGGDLSHEYHLPTPLGEDRVISCSS--CNYVVNEEVANTAISDEVATDSPFEIW 247 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 93/164 (56%), Gaps = 12/164 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSA--TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 +R +E+GH F+ GT+YS P+ A T A + +QMG YGIG R++ A E D Sbjct: 392 SRAMELGHTFFLGTRYSQPLHAMATIPPAT-QPTPLQMGCYGIGISRIIGAAAEHLADQT 450 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG------CDVFWDDMGEQIGS 390 G+ WP ++AP+ +I K D+ DA + +Y ++ + DV DD + + Sbjct: 451 GLNWPAAIAPYSCVVIPGKDADE--GDAVQ-VYQQIEGIVGPERRLVDVVLDDRAKSLPW 507 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + A ADL+GFP+ V++G ++ + +VE++ R G+++ + + ++ Sbjct: 508 KMADADLIGFPVIVLLGREWRAARRVEVQCRRLGVKQAVEIADL 551 >gi|242768112|ref|XP_002341505.1| prolyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] gi|218724701|gb|EED24118.1| prolyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] Length = 641 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/267 (35%), Positives = 149/267 (55%), Gaps = 13/267 (4%) Query: 2 RRSKYFLPILQENPRDAEIA---SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 R S +++P + AE ++ L++R G I Q GI+ LPLG + + + A+I Sbjct: 42 RVSNFWIPTGGIERKAAETVKEDANDLLIRAGFIRQAYSGIFHMLPLGLRVQNKLEALID 101 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 GA ++S+ +L S +LW ++GR S G E+ + DR + + PTHEE +T + Sbjct: 102 RHMESLGASKVSLSSLSSQELWEKTGRLKS-GSEVFKFNDRKESRFLLAPTHEEEITSLV 160 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S + SY+ LP YQI K+RDE RPR G++R REF+MKD Y+FD E + +Y Sbjct: 161 ASLVNSYKELPLRLYQITRKYRDEARPRQGLLRGREFVMKDLYTFDYNAEQALATYEATR 220 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK-DFMDFPIPSEN 236 +Y RIF L + + A+SG +GG+LSHEF ++D GE T + CS D++ N Sbjct: 221 EAYKRIFDTLKVPYLVAAADSGNMGGNLSHEFHFISDKGEDTLISCSHCDYV------YN 274 Query: 237 TDFDDIISLNSIVEQ-WTAPYAATSDV 262 + D +L +++E+ T P + S V Sbjct: 275 EEVSDGRALGTVIEKPLTPPVPSESGV 301 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 21/174 (12%) Query: 281 GIEVGHIFYFGTKYSLPMSA--------------TFKGADGKDHYVQMGSYGIGAMRVVA 326 +E+GH FY GT+YS + A + ++ ++MG +GIG R+++ Sbjct: 464 AVELGHTFYLGTRYSEVLKAKVFVDNSVIKSNESSTNSNKSQNVPMEMGCHGIGVSRMIS 523 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK--VGCDVFWDDM 384 AV ++ D +G+ WP ++APF+I ++ + + E IY L + D+ DD Sbjct: 524 AVADARSDIRGLNWPRAIAPFEIIVVPARNLEP----EAENIYDLLRQHTDTSDIILDDR 579 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR-LTGIREDMSLEEVINY 437 +Q+G + ADL+G+P+ +++G + S+ KVE+ R L G+RED+ L ++ Y Sbjct: 580 TKQVGWKLKDADLIGYPIVIVLGKAWKSEHKVEVHCRQLDGLREDVPLGNLVEY 633 >gi|149246389|ref|XP_001527664.1| prolyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] gi|146447618|gb|EDK42006.1| prolyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] Length = 557 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 82/221 (37%), Positives = 130/221 (58%), Gaps = 5/221 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R K + L + D ++ +H+L+ + G+I G+ W G D +N I+RE Sbjct: 4 RVPKLYCHQLGKFKTDIQVPTHELLAKLGIISYPHSGLVHWGKTGLLIQDKINGIVRENL 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ + L +LW+++GR+ + ++ +L +ND+ ++ PT EE +T+ + Sbjct: 64 DHLGYEELKLSLLSHKNLWLQTGRW--HQPDLFKL--QNDEYLL-APTAEEEITEYVKRS 118 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 I+SY++LP +YQI KFR E RPR G++R REFLMKDAYSFD+ + +Y M +Y Sbjct: 119 IQSYKHLPVGYYQINEKFRAEKRPRGGLLRGREFLMKDAYSFDIDETSALKTYESMVNAY 178 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 IF +G+ + +A+SG IGGDLSHE+ +L GE VF Sbjct: 179 HNIFREIGVPYVKAQADSGDIGGDLSHEWHLLNQNGEDTVF 219 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 28/202 (13%) Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 +F DFPI N ++ IV A +V E E + IE+G Sbjct: 326 NFPDFPINFTNKSMITTLTEVPIV------LARAGEVCGE-----CEEGHLQESNAIEIG 374 Query: 286 HIFYFGTKYSLPMSATFK------GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 H FY G KYS P++ T + G + +V+MG YGIG R++AAV E + D +G+ Sbjct: 375 HTFYLGEKYSKPLNLTVEVPTNDNGNTLESRFVKMGCYGIGISRIIAAVAEINRDDRGLR 434 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP S+AP++ ++I A E + ++L ++ C + D E+ G +F + +G Sbjct: 435 WPASIAPWEATIITDDA------SKVEAVESQLMQIDCRL--DGRDERFGYKFKASTTMG 486 Query: 400 FPLQVIVGSKFVSDSKVEIKHR 421 PL +++G F VEI+ R Sbjct: 487 IPLIIVLGKSF---PHVEIEIR 505 >gi|50290081|ref|XP_447472.1| hypothetical protein [Candida glabrata CBS 138] gi|49526782|emb|CAG60409.1| unnamed protein product [Candida glabrata] Length = 552 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 8/215 (3%) Query: 15 PRDAEIASHK------LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR-TGAI 67 PR +I S K ++ G I + G+++WLPLG + L + A++R+ + AI Sbjct: 18 PRKVDIQSLKDIPTLDVLQNLGFIRRTQSGLFNWLPLGLRTLHKLEALVRKRMDEDASAI 77 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E+S+ +L W ++GR+D E+ ++ D N PT EE +T + +++IKSY++ Sbjct: 78 EVSLSSLSPKINWEKTGRWDK-SNELFKVKDNNAFEYCLTPTCEEDITSLMKNYIKSYKD 136 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP T YQI K+RDE RPR G++R REF+MKDAYSF + E + +NKM Y RIF Sbjct: 137 LPITAYQISRKYRDEKRPRGGLLRGREFIMKDAYSFASSEEQAIEIFNKMDSVYDRIFSD 196 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 L + A+SG IGGDLS E+ L GE VF Sbjct: 197 LKIPYKAAYADSGEIGGDLSKEYHFLNSFGEDTVF 231 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 4/158 (2%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGK 336 ++ IEVGHIF+ G KYS P FK + D V MG YGIG R++ A E D Sbjct: 378 ASNSIEVGHIFHLGDKYSKPFEVNFKDENNSDDSIVSMGCYGIGISRLIGAAAEIGRDHM 437 Query: 337 GIIWPDSVAPFKISLINIKAHDQVC-RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 G+ WP +AP+++S++ V D + + L D G G + A++ Sbjct: 438 GLRWPQVIAPYQVSVVTSNNEGMVAINDMKKSLMKNLDTFDLDDLHRSTG--FGGRIALS 495 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G P+ VI+G+K + ++E++ + +D +E+ Sbjct: 496 HAIGIPICVIIGTKSWPNVEIEVRGKKWDNGDDTPIEK 533 >gi|212542487|ref|XP_002151398.1| prolyl-tRNA synthetase [Penicillium marneffei ATCC 18224] gi|210066305|gb|EEA20398.1| prolyl-tRNA synthetase [Penicillium marneffei ATCC 18224] Length = 641 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 87/227 (38%), Positives = 131/227 (57%), Gaps = 5/227 (2%) Query: 2 RRSKYFLPILQENPRDAEIA---SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 R S ++LP + AE ++ L++R G I Q G++ LPLG + + + A+I Sbjct: 42 RTSNFWLPTGGIERKAAETEKEDANDLLIRAGFIRQAYSGVFHMLPLGLRVQNKLEALID 101 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 GA ++S+ +L S +LW ++GR S G E+ + DR + + PTHEE +T + Sbjct: 102 THMQSLGASKVSLSSLSSQELWEKTGRLKS-GSEVFKFNDRKESRFLLAPTHEEEITSLV 160 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S + SY+ LP YQI K+RDE RPR G++R REF+MKD Y+FD E + +Y Sbjct: 161 ASLVNSYKELPLRLYQISRKYRDEARPRQGLLRGREFVMKDLYTFDYNAEQALATYEATR 220 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 +Y RIF L + + A+SG +GG+LSHEF ++D GE T + CS Sbjct: 221 EAYKRIFDTLKVPYLVAAADSGNMGGNLSHEFHFISDKGEDTLISCS 267 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 35/227 (15%) Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 ++F + + D D +SL +VE P + +H +E+GH Sbjct: 425 VEFALLNRFPDSKDGLSLTRVVEGEKCPKCSKGFLHTHN--------------AVELGHT 470 Query: 288 FYFGTKYSLPMSATF---------KGADGKDHYVQ-----MGSYGIGAMRVVAAVIESSH 333 FY GT+YS + A +D + Q MG +GIG R+++AV ++ Sbjct: 471 FYLGTRYSEVLKAKVFVDSSATKSNESDSNSNKPQNVPMEMGCHGIGVSRMISAVADACS 530 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV--GCDVFWDDMGEQIGSQ 391 D +G+ WP ++APF+I ++ + + E +Y L + DV DD + +G + Sbjct: 531 DVRGLNWPRAIAPFEIIVVPARNLES----EAENVYDLLRQQTDTSDVILDDRTKHVGWK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHR-LTGIREDMSLEEVINY 437 AD++G+P+ V+VG + K+E+ R L G+RED+ ++ +I+Y Sbjct: 587 LKDADMIGYPIVVVVGKAWQWAQKLEVHCRQLDGLREDVPVDNLIDY 633 >gi|190345647|gb|EDK37570.2| hypothetical protein PGUG_01668 [Meyerozyma guilliermondii ATCC 6260] Length = 526 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 123/207 (59%), Gaps = 5/207 (2%) Query: 19 EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD 78 ++ +H+L + G I+ +G+ W+P G + + II GA E+++ L SA+ Sbjct: 22 KVPTHQLYTKLGFINHPKQGLVHWMPPGWNMVRKLQTIIHRHMVGAGAEEVNLSLLSSAE 81 Query: 79 LWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 LW ++GR+++ E+ +L ND T EE +T + ++ I SY++LP +YQI+ K Sbjct: 82 LWNKTGRWEN--NELFKL---NDGETCLAATCEEEITQLVKNQIASYKSLPLLYYQIKEK 136 Query: 139 FRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE 198 +RDE RPR G++R REFLMKDAYSFD+ + + +YN + +Y +F L + + A+ Sbjct: 137 YRDEKRPRGGLLRGREFLMKDAYSFDIDEKSAMETYNTVVNAYHGVFKELKVPYVKAEAD 196 Query: 199 SGPIGGDLSHEFIVLADTGETQVFCSK 225 +G IGG LSHE++ L GE VF K Sbjct: 197 TGDIGGSLSHEWLYLHPQGEDTVFVCK 223 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 26/206 (12%) Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGH 286 F DFPIP N F I +L I P ++ S + + +R IEV H Sbjct: 322 FPDFPIPFVNRSF--ITTLTDI------PIVT---AEAGEICGSCEDGELECSRAIEVAH 370 Query: 287 IFYFGTKYSLPMSATFK--GADG--KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 FY G KY+ P+ T + G +G ++ + MG YGIG R++ A+ E D G WP Sbjct: 371 TFYLGDKYTDPLECTVQVPGPNGVTEERNLMMGCYGIGLSRIIGAIGEICKDENGFRWPA 430 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFP 401 +++P+ ++I + E + L + D+ D + IG + + +G P Sbjct: 431 AISPWTATVI-------TSGELGEDLKQTLESMNIDMCVDSRSKVGIGKKVRQSQAMGIP 483 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIRE 427 + +IVG+K+ ++E+ R G E Sbjct: 484 ISIIVGNKY---PQIEVNVRGVGKDE 506 >gi|119184159|ref|XP_001243013.1| hypothetical protein CIMG_06909 [Coccidioides immitis RS] Length = 668 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 89/224 (39%), Positives = 123/224 (54%), Gaps = 2/224 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 RSK ++PI A S L+++ G I Q GIY LPLG + + +I + Sbjct: 42 RSKIWVPIAPVPKNLAAQDSTALLVQAGFIRQAYAGIYHLLPLGLRVQKKLENLIDKHME 101 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA ++ + L S LW SGR E+ R DR + + PTHEE +T + Sbjct: 102 SLGASKLFLSALSSQLLWKLSGRLHD-DSEVFRFLDRKNAPFLLAPTHEEEITKLVGGLT 160 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ LP YQI K+RDE RPR G++R+REFLMKD Y+FD + E + SYN + +Y+ Sbjct: 161 NSYKELPLRVYQISRKYRDERRPRQGLLRAREFLMKDLYTFDYSTEEAMKSYNSVKEAYV 220 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSK 225 R+F L L I A+SG +GG L+HEF + + GE V CSK Sbjct: 221 RLFDELKLPYIVAAADSGSMGGSLNHEFHLESSKGEDIVVSCSK 264 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 89/175 (50%), Gaps = 21/175 (12%) Query: 282 IEVGHIFYFGTKYSLPMSATFK-------GADGKDHY------VQMGSYGIGAMRVVAAV 328 IE+GH F GT+YS P+ AT ADG +QMG YGIG R++AAV Sbjct: 492 IEMGHTFLLGTRYSSPLQATVAIDPAKSGNADGAKESPKSVVPLQMGCYGIGVSRMIAAV 551 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV---GCDVFWDDMG 385 + D +G+ WP ++APF ++ A ++ +KIY ++ D DD Sbjct: 552 ADILADSRGLNWPRAMAPFSAIIVPGLAF----QEDSKKIYDHIASYHNGSIDTILDDRE 607 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEVINYAS 439 + + + ADL G P+ +VG + VE++ RL +R D+SL+E+ ++ S Sbjct: 608 QPLIRKLKDADLTGIPVICVVGKSWERHRNVEVQCRRLNNLRTDVSLDELPSFIS 662 >gi|146420078|ref|XP_001485997.1| hypothetical protein PGUG_01668 [Meyerozyma guilliermondii ATCC 6260] Length = 526 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 123/207 (59%), Gaps = 5/207 (2%) Query: 19 EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD 78 ++ +H+L + G I+ +G+ W+P G + + II GA E+++ L SA+ Sbjct: 22 KVPTHQLYTKLGFINHPKQGLVHWMPPGWNMVRKLQTIIHRHMVGAGAEEVNLSLLSSAE 81 Query: 79 LWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 LW ++GR+++ E+ +L ND T EE +T + ++ I SY++LP +YQI+ K Sbjct: 82 LWNKTGRWEN--NELFKL---NDGETCLAATCEEEITQLVKNQIASYKSLPLLYYQIKEK 136 Query: 139 FRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE 198 +RDE RPR G++R REFLMKDAYSFD+ + + +YN + +Y +F L + + A+ Sbjct: 137 YRDEKRPRGGLLRGREFLMKDAYSFDIDEKLAMETYNTVVNAYHGVFKELKVPYVKAEAD 196 Query: 199 SGPIGGDLSHEFIVLADTGETQVFCSK 225 +G IGG LSHE++ L GE VF K Sbjct: 197 TGDIGGSLSHEWLYLHPQGEDTVFVCK 223 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 26/206 (12%) Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGH 286 F DFPIP N F I +L I ++ S + + R IEV H Sbjct: 322 FPDFPIPFVNRSF--ITTLTDI---------PIVTAEAGEICGSCEDGELECLRAIEVAH 370 Query: 287 IFYFGTKYSLPMSATFK--GADG--KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 FY G KY+ P+ T + G +G ++ + MG YGIG R++ A+ E D G WP Sbjct: 371 TFYLGDKYTDPLECTVQVPGPNGVTEERNLMMGCYGIGLSRIIGAIGEICKDENGFRWPA 430 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFP 401 +++P+ ++I + E + L + D+ D + IG + + +G P Sbjct: 431 AISPWTATVI-------TSGELGEDLKQTLESMNIDMCVDSRSKVGIGKKVRQSQAMGIP 483 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIRE 427 + +IVG+K+ ++E+ R G E Sbjct: 484 ISIIVGNKY---PQIEVNVRGVGKDE 506 >gi|320031958|gb|EFW13915.1| prolyl-tRNA synthetase [Coccidioides posadasii str. Silveira] Length = 668 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 89/224 (39%), Positives = 123/224 (54%), Gaps = 2/224 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 RSK ++PI A S L+++ G I Q GIY LPLG + + +I + Sbjct: 42 RSKIWVPIAPVPKNLAAQDSTALLVQAGFIRQAYAGIYHLLPLGLRVQKKLENLIDKHME 101 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA ++ + L S LW SGR E+ R DR + + PTHEE +T + Sbjct: 102 SLGASKLFLSALSSQLLWKLSGRLHD-DSEVFRFLDRKNAPFLLAPTHEEEITKLVGGLT 160 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ LP YQI K+RDE RPR G++R+REFLMKD Y+FD + E + SYN + +Y+ Sbjct: 161 NSYKELPLRVYQISRKYRDERRPRQGLLRAREFLMKDLYTFDYSTEEAMKSYNSVKEAYV 220 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSK 225 R+F L L I A+SG +GG+L+HEF + GE V CSK Sbjct: 221 RLFDELKLPYIVAAADSGNMGGNLNHEFHLENSKGEDIVVSCSK 264 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 89/175 (50%), Gaps = 21/175 (12%) Query: 282 IEVGHIFYFGTKYSLPMSATFK-------GADGKDHY------VQMGSYGIGAMRVVAAV 328 IE+GH F GT+YS P+ AT ADG +QMG YGIG R++AAV Sbjct: 492 IEMGHTFLLGTRYSSPLQATVAIDPAKSVNADGAKESPKSVVPLQMGCYGIGVSRMIAAV 551 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV---GCDVFWDDMG 385 + D +G+ WP ++APF ++ A ++ +KIY ++ D DD Sbjct: 552 ADILADSRGLNWPRAMAPFSAIIVPGLAF----QEDSKKIYDHIASYHNGSIDTILDDRE 607 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEVINYAS 439 + + + ADL G P+ +VG + VE++ RL +R D+SL+E+ ++ S Sbjct: 608 QPLIRKLKDADLTGIPVICVVGKSWERHRNVEVQCRRLNNLRTDVSLDELPSFIS 662 >gi|238498424|ref|XP_002380447.1| prolyl-tRNA synthetase [Aspergillus flavus NRRL3357] gi|220693721|gb|EED50066.1| prolyl-tRNA synthetase [Aspergillus flavus NRRL3357] Length = 627 Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 86/227 (37%), Positives = 134/227 (59%), Gaps = 5/227 (2%) Query: 2 RRSKYFLP---ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 R S +++P I ++N + + + L++R G + Q GI+ LPLG + D + +I Sbjct: 40 RVSNFWIPTGGISKKNIQGEKEDVNDLLVRGGFLRQAYSGIFHMLPLGLRVQDKLERLID 99 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 + GA ++S+ ++ S +LW SGR G E+ + DR + + PTHEE +T + Sbjct: 100 KHMRSVGASKVSLSSISSQELWERSGRLGE-GSEVFKFHDRKESRFLLAPTHEEEITTLV 158 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S KSYR+LP YQI K+RDE RPR G++R REF+MKD Y+FD T E + +Y + Sbjct: 159 GSLAKSYRDLPLRVYQISRKYRDEPRPRQGLLRGREFIMKDLYTFDCTVEEALETYTSVK 218 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 +Y R+F+ L + + A+SG +GG+LSHEF V + GE T + C+ Sbjct: 219 AAYTRLFNDLKIPYLVAAADSGNMGGNLSHEFHVPSSKGEDTVISCT 265 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 96/168 (57%), Gaps = 15/168 (8%) Query: 281 GIEVGHIFYFGTKYSLPMSATF----KGADGKDHYV---QMGSYGIGAMRVVAAVIESSH 333 IE+GH F+ GT+YS + A+ + +H V QMG +GIG R++ AV +S Sbjct: 456 AIELGHTFHLGTRYSEVLQASVMVDQSSSGSSEHQVVPMQMGCHGIGVSRMITAVADSLA 515 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK---VGCDVFWDDMGEQIGS 390 D KG+ WP +VAPF++ ++ K ++ EKIY L+ DV DD +Q+G Sbjct: 516 DSKGLNWPRAVAPFEVIVVPAKGLEE----EAEKIYDTLTSDPASPVDVILDDRDKQMGW 571 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR-LTGIREDMSLEEVINY 437 + ADL+G+P+ V+VG + + +E++ R L +RE++ LE++ + Sbjct: 572 KLGDADLIGYPIIVVVGKGWKKEQTLEVQCRQLDNLRENVPLEQLSTF 619 >gi|317155666|ref|XP_001825276.2| prolyl-tRNA synthetase [Aspergillus oryzae RIB40] Length = 627 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 86/227 (37%), Positives = 134/227 (59%), Gaps = 5/227 (2%) Query: 2 RRSKYFLP---ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 R S +++P I ++N + + + L++R G + Q GI+ LPLG + D + +I Sbjct: 40 RVSNFWIPTGGISKKNIQGEKEDVNDLLVRGGFLRQAYSGIFHMLPLGLRVQDKLERLID 99 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 + GA ++S+ ++ S +LW SGR G E+ + DR + + PTHEE +T + Sbjct: 100 KHMRSVGASKVSLSSISSQELWERSGRLGE-GSEVFKFHDRKESRFLLAPTHEEEITTLV 158 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S KSYR+LP YQI K+RDE RPR G++R REF+MKD Y+FD T E + +Y + Sbjct: 159 GSLAKSYRDLPLRVYQISRKYRDEPRPRQGLLRGREFIMKDLYTFDCTVEEALETYTSVK 218 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCS 224 +Y R+F+ L + + A+SG +GG+LSHEF V + GE T + C+ Sbjct: 219 AAYTRLFNDLKIPYLVAAADSGNMGGNLSHEFHVPSSKGEDTVISCT 265 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 96/168 (57%), Gaps = 15/168 (8%) Query: 281 GIEVGHIFYFGTKYSLPMSATF----KGADGKDHYV---QMGSYGIGAMRVVAAVIESSH 333 +E+GH F+ GT+YS + A+ + +H V QMG +GIG R++ AV +S Sbjct: 456 AVELGHTFHLGTRYSEVLQASVMVDQSSSGSSEHQVVPMQMGCHGIGVSRMITAVADSLA 515 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK---VGCDVFWDDMGEQIGS 390 D KG+ WP +VAPF++ ++ K ++ EKIY L+ DV DD +Q+G Sbjct: 516 DSKGLNWPRAVAPFEVIVVPAKGLEE----EAEKIYDTLTSDPASPVDVILDDRDKQMGW 571 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR-LTGIREDMSLEEVINY 437 + ADL+G+P+ V+VG + + +E++ R L +RE++ LE++ + Sbjct: 572 KLGDADLIGYPIIVVVGKGWKKEQTLEVQCRQLDNLRENVPLEQLSTF 619 >gi|164422625|ref|XP_958617.2| hypothetical protein NCU09892 [Neurospora crassa OR74A] gi|157069749|gb|EAA29381.2| predicted protein [Neurospora crassa OR74A] Length = 631 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT-GAIEMSVPTLQSADLW 80 +H ++R G + Q GI+ LPLG++ D V ++ + + A +S+ ++ S LW Sbjct: 113 AHSKLVRAGFLRQSHAGIFHMLPLGKRVQDKVERLVAKHMEESLAASRVSLSSISSEALW 172 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 SGR + E+ R DR A + PTHEE +T + ++SY++LP YQI KFR Sbjct: 173 ERSGRLPNIAPELFRFPDRKGSAYLLSPTHEEEITYLVAQTVRSYKDLPLRLYQITRKFR 232 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 DELRPR G++R REF+MKD Y+FD + +Y K+ +Y RIF+ + L + +A SG Sbjct: 233 DELRPRHGLLRGREFIMKDLYTFDTDLTSALDTYEKVRAAYSRIFNDMKLPVLAAKASSG 292 Query: 201 PIGGDLSHEFIVLADTGETQVF 222 +GGDLSHE+ + + GE + Sbjct: 293 DMGGDLSHEYHLPSPFGEDNII 314 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 25/144 (17%) Query: 280 RGIEVGHIFYFGTKYSLPMSA---------------TFKGADGKDHYVQMGSYGIGAMRV 324 + +E+GH F+ GT+YS P+ A T K +QMG +GIG RV Sbjct: 491 KAMELGHTFHLGTRYSQPLGAKISLPPPSSSEAKPSTGDSGTSKTVSMQMGCHGIGISRV 550 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR-LSKVG-----CD 378 + AV E D KG+ WP ++AP+ + I + A D D ++Y R L+ +G D Sbjct: 551 IGAVAEHLADDKGLNWPVAIAPY--TCIVVFAEDNY--DDAVEVYKRILNGIGDQDERLD 606 Query: 379 VFWDDMGEQIGSQFAVADLLGFPL 402 + DD + + + ADL+ F L Sbjct: 607 IILDDRQKSLPWKLKDADLIDFEL 630 >gi|303320217|ref|XP_003070108.1| prolyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240109794|gb|EER27963.1| prolyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 668 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/224 (39%), Positives = 122/224 (54%), Gaps = 2/224 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 RSK ++PI A S L+++ G I Q GIY LPLG + + +I + Sbjct: 42 RSKIWVPIAPVPKNLAAQDSTALLVQAGFIRQAYAGIYHLLPLGLRVQKKLENLIDKHME 101 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA ++ + L S LW SGR E+ R DR + PTHEE +T + Sbjct: 102 SLGASKLFLSALSSQLLWKLSGRLHD-DSEVFRFLDRKYAPFLLAPTHEEEITKLVGGLT 160 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ LP YQI K+RDE RPR G++R+REFLMKD Y+FD + E + SYN + +Y+ Sbjct: 161 NSYKELPLRVYQISRKYRDERRPRQGLLRAREFLMKDLYTFDYSTEEAMKSYNSVKEAYV 220 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSK 225 R+F L L I A+SG +GG+L+HEF + GE V CSK Sbjct: 221 RLFDELKLPYIVAAADSGNMGGNLNHEFHLENSKGEDIVVSCSK 264 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 21/175 (12%) Query: 282 IEVGHIFYFGTKYSLPMSATFK-------GADGKDHY------VQMGSYGIGAMRVVAAV 328 IE+GH F GT+YS P+ AT ADG +QMG YGIG R++AAV Sbjct: 492 IEMGHTFLLGTRYSSPLQATVAIDPAKSVNADGAKESPKSVVPLQMGCYGIGVSRMIAAV 551 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV---GCDVFWDDMG 385 + D +G+ WP ++APF ++ A ++ +KIY ++ D DD Sbjct: 552 ADILADSRGLNWPRAMAPFSAIIVPGLAF----QEDSKKIYDHIASYHNGSIDTILDDRE 607 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEVINYAS 439 + + ADL G P+ +VG + VE++ RL +R D+SL+E+ ++ S Sbjct: 608 RPLIRKLKDADLTGIPVICVVGKSWERHRNVEVQCRRLNNLRTDVSLDELPSFIS 662 >gi|258569006|ref|XP_002585247.1| predicted protein [Uncinocarpus reesii 1704] gi|237906693|gb|EEP81094.1| predicted protein [Uncinocarpus reesii 1704] Length = 598 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/230 (39%), Positives = 127/230 (55%), Gaps = 5/230 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S +++P + + ++L++R G I Q GI+ LPLG + + +I + Sbjct: 12 RLSTFWVPTGGVAEKSKKKDGNELLVRAGFIRQAYSGIFHLLPLGLRVQQKLENLIDKHM 71 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA ++S+ +L S +LW SGR + E+ R DR + + PTHEE +T + S Sbjct: 72 QSIGASKLSLSSLSSQELWKRSGRLND-DSEIFRFNDRKGASFLLAPTHEEEITALVGSL 130 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +KSYR+LP YQI K+RDE RPR G++R REFLMKD Y+FD + E +YN + Y Sbjct: 131 VKSYRDLPLRVYQITRKYRDEPRPRQGLLRGREFLMKDLYTFDYSAEKGLDTYNTVKEVY 190 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF----CSKDF 227 RIF L L + A+SG +GGDLSHEF GE V CS F Sbjct: 191 TRIFDDLRLPYLVAAADSGNMGGDLSHEFHFENPNGEDTVITCTNCSHAF 240 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 25/177 (14%) Query: 282 IEVGHIFYFGTKYSLPMSATF----------KGADGKDHYV---QMGSYGIGAMRVVAAV 328 IE+GH F+ GT+YS + A KG +G + +MG +GIG R+++AV Sbjct: 422 IELGHTFHLGTRYSSALQANVAVDPTKLIGGKGPEGASSVLVPLEMGCHGIGVSRMISAV 481 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY-----ARLSKVGCDVFWDD 383 D KG+ WP +APF + K +Q DA E++Y ++S + D DD Sbjct: 482 ATMLADHKGLKWPQVIAPFSAVICFGKGFEQ---DA-EQVYDALVSGQMSPI--DAVLDD 535 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR-LTGIREDMSLEEVINYAS 439 + ADL+GFP+ +++G ++ S VE++ R L ++D+ L E+ + S Sbjct: 536 RSHTFPWKLKDADLIGFPVILVLGKQWRSSKLVEVQCRQLDNFKDDVPLNELPSVVS 592 >gi|169836892|ref|ZP_02870080.1| prolyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7a] Length = 568 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 80/242 (33%), Positives = 137/242 (56%), Gaps = 10/242 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MRR++ F + +P + +L++R G I + G+Y++LPLG K ++N+ +I+REE Sbjct: 1 MRRTELFTKTNKTSPSGEVSKNAQLLIRAGFIAKEMAGVYAFLPLGLKVVENIKSIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 N+ G+ E+ + LQ ++W ++ R+ D+ + ++D + G +HEE + ++ R Sbjct: 61 MNKIGSKELLMTNLQRKEVWEKTNRWNDNIVDIWFKTKLKDDTEVGLGWSHEEPIVNMMR 120 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 I+SY++LP + YQ Q K R+ELR + G+MR REF+MKD YSF T E + Y+K+ Sbjct: 121 QFIRSYKDLPVSVYQFQNKMRNELRAKSGIMRGREFVMKDMYSFHATKEDLEEYYHKVME 180 Query: 180 SYLRIFHRLGL-KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 +Y + + RLG+ + SG SHEF + D GE ++ +PS N Sbjct: 181 AYEQCYRRLGVGDDTYVTFASGGAFTKFSHEFQTVCDAGEDDIYI--------VPSMNIA 232 Query: 239 FD 240 ++ Sbjct: 233 YN 234 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 2/164 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + R EVG+IF FG++ + M + + G+ + +GSYGIG R++ + E D K Sbjct: 407 IRKRTAEVGNIFNFGSQKTDEMELYYTDSKGEQKSIFLGSYGIGITRIMGVIAEKLSDEK 466 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G++WP +AP K+ L++I + D + +++Y + G +V +DD + G +F + Sbjct: 467 GLVWPVDIAPAKVYLVSIGSGDAIKE--ADRLYELMKIKGIEVIYDDRDVRPGEKFTDGE 524 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 L+G P V V + + E K R TG ++ +E+ + S Sbjct: 525 LMGIPHMVTVSDRLIKTGNFEHKLRSTGEVSLLTQDELFDTISQ 568 >gi|289616456|emb|CBI56771.1| unnamed protein product [Sordaria macrospora] Length = 542 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT-GAIEMSVPTLQSADLW 80 +H ++R G + Q GI+ LPLG++ D V ++ + + A +S+ ++ S LW Sbjct: 27 AHSKLIRAGFLRQSHAGIFHMLPLGKRVQDKVERLVAKHMEESLAASRVSLSSISSEALW 86 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 SGR + E+ R DR A + PTHEE +T++ ++SY++LP YQI KFR Sbjct: 87 ERSGRLQNIAPELFRFLDRKGGAYLLSPTHEEEITNLVAQTVRSYKDLPLRLYQITRKFR 146 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 DELRPR G++R REF MKD Y+FD + +Y K+ +Y RIF+ + L + +A SG Sbjct: 147 DELRPRHGLLRGREFTMKDLYTFDTDLRSALDTYEKVRGAYSRIFNDMKLPVLAAKASSG 206 Query: 201 PIGGDLSHEFIVLADTGETQVF 222 +GGDLSHE+ + + GE V Sbjct: 207 DMGGDLSHEYHLPSPFGEDSVI 228 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 25/142 (17%) Query: 280 RGIEVGHIFYFGTKYSLPMSA-------------TFKGADGKDHYV--QMGSYGIGAMRV 324 + +E+GH F+ GT+YS P++A T G G V QMG +GIG RV Sbjct: 404 KAMELGHTFHLGTRYSEPLNAKISLPPPSPNEAKTSPGGSGTSKTVSMQMGCHGIGISRV 463 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR-LSKVG-----CD 378 + AV E D KG+ WP ++AP+ ++ + H DA E +Y R L G D Sbjct: 464 MGAVAEHLADDKGLNWPVAIAPYTCVVVFAEDH---YNDAVE-VYKRILDGSGDQDERLD 519 Query: 379 VFWDDMGEQIGSQFAVADLLGF 400 + DD + + + A LL F Sbjct: 520 IILDDRQKSLPWKLKDATLLVF 541 >gi|6320931|ref|NP_011010.1| Aim10p [Saccharomyces cerevisiae S288c] gi|731489|sp|P39965|SYPM_YEAST RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial; AltName: Full=Altered inheritance rate of mitochondria protein 10; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|603325|gb|AAB64642.1| Yer087wp [Saccharomyces cerevisiae] gi|285811719|tpg|DAA07747.1| TPA: Aim10p [Saccharomyces cerevisiae S288c] Length = 576 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 81/230 (35%), Positives = 129/230 (56%), Gaps = 3/230 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R F P N + +L+ G + + G++ WLPLG ++L+ V+ IR Sbjct: 9 RSCHIFHPKSLSNNTLKSETTQELLQTVGFVRRSQVGLFQWLPLGLRSLNKVSNAIRNRM 68 Query: 62 NRTG-AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G AIE+S+ + S LW + R+++ E+ +L D K T EE +TD+ ++ Sbjct: 69 DSDGGAIEVSLSAISSKALWQATDRWNN--SELFKLKDSKGKQYCLTATCEEDITDLMKN 126 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I SY+++P T YQ+ K+RDE+RPR G++R REFLMKDAYSF E + S+ K+ + Sbjct: 127 YIASYKDMPITIYQMTRKYRDEIRPRGGILRGREFLMKDAYSFASNEEDAFASFQKLDDT 186 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 Y +IF L + + A+SG IGG+ S EF ++ ++GE + K D Sbjct: 187 YNKIFKDLKIPFVSAWADSGDIGGEFSKEFHLIHESGEDTLMSCKHCGDI 236 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 26/210 (12%) Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 +F DFP+ + IS SIV D ++ E + + IEVG Sbjct: 334 NFPDFPLKKYLKNNFGQISDVSIV-----------DAQENEICGKCEEGRLEPLKSIEVG 382 Query: 286 HIFYFGTKYSLPMSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 HIF G KYS P++ F + K+ +V MG YGIG R+V A+ E D G WP + Sbjct: 383 HIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGIGVSRLVGAIAELGRDSNGFRWPAIM 442 Query: 345 APFKISLI---NIKAHDQVCRDACEKIY-----ARLSKVGCDVFWDDMGEQIGSQFAVAD 396 AP+K+S+ N + Q +D ++ L D F + +G IG++ ++ Sbjct: 443 APYKVSICTGPNNPENSQRLQDVKSELLNDPTMQNLQNDILDQFNEKLG--IGARIKLSH 500 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 +G PL VIVGSK + ++E++ GIR Sbjct: 501 AMGIPLCVIVGSKSWPNVEIEVR----GIR 526 >gi|151944803|gb|EDN63062.1| conserved protein [Saccharomyces cerevisiae YJM789] gi|190405650|gb|EDV08917.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi|259146006|emb|CAY79266.1| EC1118_1E8_2102p [Saccharomyces cerevisiae EC1118] Length = 576 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 125/211 (59%), Gaps = 3/211 (1%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG-AIEMSVPTLQSADL 79 + +L+ G + + G++ WLPLG ++L+ V+ IR + G AIE+S+ + S L Sbjct: 28 TTQELLQTVGFVRRSQVGLFQWLPLGLRSLNKVSNAIRNRMDSDGGAIEVSLSAISSKAL 87 Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 W + R+++ E+ +L D K T EE +TD+ +++I SY+++P T YQ+ K+ Sbjct: 88 WQATDRWNN--SELFKLKDSKGKQYCLTATCEEDITDLMKNYIASYKDMPITIYQMTRKY 145 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE+RPR G++R REFLMKDAYSF E + S+ K+ +Y +IF L + + A+S Sbjct: 146 RDEIRPRGGILRGREFLMKDAYSFASNEEDAFASFQKLDDTYNKIFKDLKIPFVSAWADS 205 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 G IGG+ S EF ++ ++GE + K D Sbjct: 206 GDIGGEFSKEFHLIHESGEDTLMSCKHCGDI 236 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 26/210 (12%) Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 +F DFP+ + IS SIV D ++ E + + IEVG Sbjct: 334 NFPDFPLKKYLKNNFGQISDVSIV-----------DAQENEICGKCEEGRLEPLKSIEVG 382 Query: 286 HIFYFGTKYSLPMSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 HIF G KYS P++ F + K+ +V MG YGIG R+V A+ E D G WP + Sbjct: 383 HIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGIGVSRLVGAIAELGRDSNGFRWPAIM 442 Query: 345 APFKISLI---NIKAHDQVCRDACEKIY-----ARLSKVGCDVFWDDMGEQIGSQFAVAD 396 AP+K+S+ N + Q +D K+ L D F + +G IG++ ++ Sbjct: 443 APYKVSICTGPNNPENSQRLQDVKSKLLNDPTMQNLQNDILDQFNEKLG--IGARIKLSH 500 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 +G PL VIVGSK + ++EI+ GIR Sbjct: 501 AMGIPLCVIVGSKSWPNVEIEIR----GIR 526 >gi|156089629|ref|XP_001612221.1| tRNA synthetase class II core domain containing protein [Babesia bovis] gi|154799475|gb|EDO08653.1| tRNA synthetase class II core domain containing protein [Babesia bovis] Length = 439 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 112/388 (28%), Positives = 166/388 (42%), Gaps = 74/388 (19%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 + + G++ S GI + LP+G++ ++ + +I E +R GA E+ +P L S+D E R Sbjct: 48 LRKPGILTHMSPGISTVLPIGKRIVNRIERVIHVEMSRIGAKEVELPMLLSSDTINE--R 105 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK--SYRNLPFTFYQIQLKFRDEL 143 + +G+E+ L DRN K PT EE++ + + S RNLP YQI KFRDE Sbjct: 106 RNEFGRELFSLTDRNGKHYDLCPTCEELICRMLDKALSPLSKRNLPIYLYQIGRKFRDEA 165 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 RP MR REF+MKDAYSF + + YNK +Y RIF L Sbjct: 166 RPCNSNMRCREFIMKDAYSFHSDKDSAAMDYNKFKQAYERIFTLL--------------- 210 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 +LS + + + DT Sbjct: 211 -ELSFDTVTIGDT----------------------------------------------- 222 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E F ++ NK+ +E+ HIF G + ++G H V + SYGIG R Sbjct: 223 -EHEFRAMLPNKKTL---MEIAHIFQLGDAITTEAGLKYEGEGRMKHPVYLNSYGIGIHR 278 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ A D +GI P +AP+ +++I D+ A IY LSK G D F D Sbjct: 279 LLQAAASQHADSEGIRLPQIIAPYDVAVIPC---DENSEQASADIYTLLSKRGIDTFLDT 335 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFV 411 I + + +G P V V S + Sbjct: 336 RKAPINQRVSDMMNIGIPHIVYVSSVYT 363 >gi|256271449|gb|EEU06503.1| YER087W-like protein [Saccharomyces cerevisiae JAY291] Length = 576 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 125/211 (59%), Gaps = 3/211 (1%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG-AIEMSVPTLQSADL 79 + +L+ G + + G++ WLPLG ++L+ V+ IR + G AIE+S+ + S L Sbjct: 28 TTQELLQTVGFVRRSQVGLFQWLPLGLRSLNKVSNAIRNRMDSDGGAIEVSLSAISSKAL 87 Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 W + R+++ E+ +L D K T EE +TD+ +++I SY+++P T YQ+ K+ Sbjct: 88 WQATDRWNN--SELFKLKDSKGKQYCLTATCEEDITDLMKNYIASYKDMPITIYQMTRKY 145 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE+RPR G++R REFLMKDAYSF E + S+ K+ +Y +IF L + + A+S Sbjct: 146 RDEIRPRGGILRGREFLMKDAYSFASNEEDAFASFQKLDDTYNKIFKDLKIPFVSAWADS 205 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 G IGG+ S EF ++ ++GE + K D Sbjct: 206 GDIGGEFSKEFHLIHESGEDTLMSCKHCGDI 236 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 26/210 (12%) Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 +F DFP+ + IS SIV D ++ E + + IEVG Sbjct: 334 NFPDFPLKKYLKNNFGQISDVSIV-----------DAQENEICGKCEEGRLEPLKSIEVG 382 Query: 286 HIFYFGTKYSLPMSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 HIF G KYS P++ F + K+ +V MG YGIG R+V A+ E D G WP + Sbjct: 383 HIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGIGVSRLVGAIAELGRDSNGFRWPAIM 442 Query: 345 APFKISLI---NIKAHDQVCRDACEKIY-----ARLSKVGCDVFWDDMGEQIGSQFAVAD 396 AP+K+S+ N + Q +D K+ L D F + +G IG++ ++ Sbjct: 443 APYKVSICTGPNNPENSQRLQDVKSKLLNDPTMQNLQNDILDQFNEKLG--IGARIKLSH 500 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 +G PL VI+GSK + ++EI+ GIR Sbjct: 501 AMGIPLCVIIGSKSWPNVEIEIR----GIR 526 >gi|83774018|dbj|BAE64143.1| unnamed protein product [Aspergillus oryzae] Length = 632 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 81/203 (39%), Positives = 122/203 (60%), Gaps = 2/203 (0%) Query: 23 HKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVE 82 + L++R G + Q GI+ LPLG + D + +I + GA ++S+ ++ S +LW Sbjct: 69 NDLLVRGGFLRQAYSGIFHMLPLGLRVQDKLERLIDKHMRSVGASKVSLSSISSQELWER 128 Query: 83 SGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 SGR G E+ + DR + + PTHEE +T + S KSYR+LP YQI K+RDE Sbjct: 129 SGRLGE-GSEVFKFHDRKESRFLLAPTHEEEITTLVGSLAKSYRDLPLRVYQISRKYRDE 187 Query: 143 LRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPI 202 RPR G++R REF+MKD Y+FD T E + +Y + +Y R+F+ L + + A+SG + Sbjct: 188 PRPRQGLLRGREFIMKDLYTFDCTVEEALETYTSVKAAYTRLFNDLKIPYLVAAADSGNM 247 Query: 203 GGDLSHEFIVLADTGE-TQVFCS 224 GG+LSHEF V + GE T + C+ Sbjct: 248 GGNLSHEFHVPSSKGEDTVISCT 270 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 96/168 (57%), Gaps = 15/168 (8%) Query: 281 GIEVGHIFYFGTKYSLPMSATF----KGADGKDHYV---QMGSYGIGAMRVVAAVIESSH 333 +E+GH F+ GT+YS + A+ + +H V QMG +GIG R++ AV +S Sbjct: 461 AVELGHTFHLGTRYSEVLQASVMVDQSSSGSSEHQVVPMQMGCHGIGVSRMITAVADSLA 520 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK---VGCDVFWDDMGEQIGS 390 D KG+ WP +VAPF++ ++ K ++ EKIY L+ DV DD +Q+G Sbjct: 521 DSKGLNWPRAVAPFEVIVVPAKGLEE----EAEKIYDTLTSDPASPVDVILDDRDKQMGW 576 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR-LTGIREDMSLEEVINY 437 + ADL+G+P+ V+VG + + +E++ R L +RE++ LE++ + Sbjct: 577 KLGDADLIGYPIIVVVGKGWKKEQTLEVQCRQLDNLRENVPLEQLSTF 624 >gi|255711434|ref|XP_002552000.1| KLTH0B04906p [Lachancea thermotolerans] gi|238933378|emb|CAR21562.1| KLTH0B04906p [Lachancea thermotolerans] Length = 568 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 117/203 (57%), Gaps = 3/203 (1%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG-AIEMSVPTLQSADL 79 ++H L+ G I Q G+ WLPLG + L+ + II+ G A E+S+ L L Sbjct: 29 STHNLLQSLGYIKQTQSGLVHWLPLGLRTLNKITNIIKHRMETDGKAEEVSLSLLSPKSL 88 Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 WV + R+D+ E+ +L D PT EE +T + S++ SY++LP T YQ+ K+ Sbjct: 89 WVHTNRWDN--GELFKLKDSKGSDYCLAPTCEEEITSLIGSYVTSYKDLPMTVYQVGRKY 146 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE RPR G++R REFLMKDAYSFD + E + ++ M +Y IF LG+ + A+S Sbjct: 147 RDEKRPRGGLLRGREFLMKDAYSFDASKEEAVRTFESMNHTYDLIFKDLGVPFVSAWADS 206 Query: 200 GPIGGDLSHEFIVLADTGETQVF 222 G IGGD+S E+ ++GE V Sbjct: 207 GDIGGDMSKEYHYTHESGEDTVM 229 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 90/171 (52%), Gaps = 6/171 (3%) Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 A+ D +L S E S R IEVGH F+ G KYS P++A F + + Y +MG Sbjct: 357 ASIVDAEAGELCGSCEEGHLSSKRSIEVGHTFFLGQKYSEPLNAKFSTRENTEEYCEMGC 416 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+V A+ + D G+ WP +VAP++IS+ K + V ++ LS G Sbjct: 417 YGIGVSRLVGAIAHVTRDDAGLRWPRAVAPYEISICAAKQDELVA-----EVEGLLSSWG 471 Query: 377 CDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 +V+ + D +G + A + LG P+ VIVG K ++E++ L G R Sbjct: 472 REVWVNRDEKAGLGRKIAASHSLGIPVCVIVGKKSWPCVEIEVRAPLVGER 522 >gi|320582734|gb|EFW96951.1| prolyl-tRNA synthetase, putative [Pichia angusta DL-1] Length = 536 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 119/205 (58%), Gaps = 7/205 (3%) Query: 18 AEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSA 77 A++ + +L+++ G + Q + G+ WLPLG + N+ IIR+ ++ G E+S+ + Sbjct: 22 ADLTTTELLMKAGYVSQPNAGLTHWLPLGLSTIRNIEEIIRKHHDKAGCQEVSLSVMSHQ 81 Query: 78 DLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQL 137 LW ++GR+ + E+ ++ D T EE MT + + SY+ LP YQI Sbjct: 82 SLWDKTGRWQN--DELFKVGD-----FCLAATAEEEMTQLVQRTADSYKKLPVIAYQIGR 134 Query: 138 KFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 K+R+E RPR G++R REF+MKDAYSFD+ + S+ KM Y IF L + + A Sbjct: 135 KYRNEKRPRGGLLRGREFVMKDAYSFDVDQSSALRSFEKMNQVYYDIFKELNVPFVKANA 194 Query: 198 ESGPIGGDLSHEFIVLADTGETQVF 222 +SG IGGDLS+E+ L+++GE + Sbjct: 195 DSGAIGGDLSYEWHFLSESGEDTLL 219 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 8/157 (5%) Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 K S +GIEVGH FY G +YS P+ A F ++G+ + +MG YGIG R+VAA+ E + Sbjct: 355 GKLKSFKGIEVGHTFYLGKRYSEPLDAGFVDSEGRRQHYEMGCYGIGVSRLVAAIAEVTR 414 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 D G+ WP SVAP ++ ++ ++ A EK ++L G D +G + A Sbjct: 415 DADGLRWPASVAPIQVDIVVAGSYTGDL-GAVEKFCSQLD--GLRYRVDATEGHLGEKLA 471 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + LG PLQVI+G ++ K+EI+ L G+R D+ Sbjct: 472 RSKRLGTPLQVIIGKQY---PKIEIE--LRGLRRDLG 503 >gi|218186121|gb|EEC68548.1| hypothetical protein OsI_36857 [Oryza sativa Indica Group] Length = 490 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 113/186 (60%), Gaps = 3/186 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ + + RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 298 PLPQVADIRNVVEGDASPDGQGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVL 357 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA-CEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H A E++Y Sbjct: 358 TMGCYGIGVTRVVAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYNT 417 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + + ++E K+R G ++ + Sbjct: 418 LRSHGIDVILDDRKERPGVMFADMELIGVPHSIVIGDRNLDNEEIEYKNRRVGEKQMIKT 477 Query: 432 EEVINY 437 E++++ Sbjct: 478 GEIVDF 483 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 53/91 (58%), Positives = 69/91 (75%) Query: 134 QIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 +IQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ +Y +IF R+GL Sbjct: 52 KIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYEAYSKIFSRMGLDFR 111 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 P++A++G IGG SHEF VLAD+GE + S Sbjct: 112 PVQADTGSIGGSASHEFQVLADSGEDDIVFS 142 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 29/60 (48%), Positives = 40/60 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L + R+E Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKIQTKFRDE 60 >gi|255722445|ref|XP_002546157.1| prolyl-tRNA synthetase [Candida tropicalis MYA-3404] gi|240136646|gb|EER36199.1| prolyl-tRNA synthetase [Candida tropicalis MYA-3404] Length = 559 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 122/204 (59%), Gaps = 4/204 (1%) Query: 19 EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD 78 +I +H+L+ + G I G+ +W G + +++IIR + G E+S+ + Sbjct: 28 DIPTHELLTKLGFITYPRSGLVNWSKSGLLIQNKISSIIRSRMDEIGFEELSLSLISYKK 87 Query: 79 LWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 LW E+GR+D E+ +L D+ ++ PT EE +TD +++SY+ LP YQI K Sbjct: 88 LWQETGRWDK-STEIFKL--EGDEYLLV-PTAEEEITDYINKNLESYKQLPILMYQINPK 143 Query: 139 FRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE 198 FR+E RPR G++R +EFLMKDAYSFDL + ++Y K+ +Y +IF L + + +A+ Sbjct: 144 FRNEKRPRGGLLRGKEFLMKDAYSFDLDESNAMNTYEKVVGAYHKIFGDLKIPYVKAQAD 203 Query: 199 SGPIGGDLSHEFIVLADTGETQVF 222 SG IGG LSHE+ + +TGE VF Sbjct: 204 SGDIGGSLSHEWHYINETGEDTVF 227 Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 82/144 (56%), Gaps = 11/144 (7%) Query: 273 ENKRVSAR-GIEVGHIFYFGTKYSLPMSA-----TFKGADGKDHYVQMGSYGIGAMRVVA 326 E+ +SA+ IEVGH FY G KYS P++ T +G K + MG YGIG R++A Sbjct: 361 EDGEISAQNAIEVGHTFYLGDKYSKPLNCNIDVPTAEGGMNK-QTIMMGCYGIGISRIIA 419 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A+ + + D KG+ WP S+AP++++ + I ++ ++ ++ L+ D DD E Sbjct: 420 AIAQINRDSKGLNWPRSIAPWEVTAVEIGQDEERTKE----VFKLLNHGKIDYRLDDRNE 475 Query: 387 QIGSQFAVADLLGFPLQVIVGSKF 410 +G + ++L+G PL +I+G + Sbjct: 476 SMGKKLKQSNLMGIPLSIILGKHY 499 >gi|326479249|gb|EGE03259.1| prolyl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 631 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 82/207 (39%), Positives = 120/207 (57%), Gaps = 1/207 (0%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 + S+ L++R G + Q G++ LPLG + + + +I + + A ++S+ +L S L Sbjct: 59 VDSNDLLIRAGFLRQPYSGVFHLLPLGLRVQEKLERLIDKHMRKLSAAKLSLSSLSSQAL 118 Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 W +SGR E+ R DR + PTHEE +T + IKSYR+LP YQI K+ Sbjct: 119 WKKSGRLHDDDSEVFRFVDRKKTPFLLAPTHEEEITSVVSGLIKSYRDLPLRVYQISRKY 178 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE RPR G++R REF+MKD Y+FD T + +YN + +Y+ +F L L + A S Sbjct: 179 RDEPRPRHGLLRGREFVMKDLYTFDSTEAEAIKTYNTVKEAYISLFKELKLPYVVASASS 238 Query: 200 GPIGGDLSHEFIVLADTGE-TQVFCSK 225 G +GG+LSHEF + GE T V CSK Sbjct: 239 GNMGGNLSHEFHFPSPKGEDTIVSCSK 265 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 95/178 (53%), Gaps = 14/178 (7%) Query: 280 RGIEVGHIFYFGTKYSLPMSA-------TFKGADGKDHY----VQMGSYGIGAMRVVAAV 328 + IE+ H F+ GT+YS + A + GA+ K +QMG +GIG R+++AV Sbjct: 454 QSIELAHTFHLGTRYSEVLQANVSINPASLPGAEKKGKQEPVPIQMGCHGIGVSRMISAV 513 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + D KG+ WP ++APF++ ++ K ++ + I + ++ D DD + Sbjct: 514 SDILADEKGLNWPQAIAPFQVVVVPGKGLEKEG-ELVYDIVTQNTQQLIDTILDDRKKDF 572 Query: 389 GSQFAVADLLGFPLQVIVG-SKFVSDSKVEIK-HRLTGIREDMSLEEVINYASHRFSN 444 + AD +G+P+ + VG + + + +KVE++ RL +R +SLEEV + S SN Sbjct: 573 AWKLRDADTIGYPIILAVGKNSWGAGNKVEVQCRRLGNLRTQVSLEEVPEFVSSLLSN 630 >gi|45185919|ref|NP_983635.1| ACR233Wp [Ashbya gossypii ATCC 10895] gi|44981709|gb|AAS51459.1| ACR233Wp [Ashbya gossypii ATCC 10895] Length = 562 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 116/201 (57%), Gaps = 2/201 (0%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +H+L+ G I Q G+ WLPLG + L NV I+R+ + G E+ + TL LW Sbjct: 32 THELLQGLGYIRQSQSGLVHWLPLGLRCLRNVENIVRKRMDECGGQELQLSTLSPETLWQ 91 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 +GR+++ KE+ +L D + T EE +T + ++SY++LP YQI K+RD Sbjct: 92 RTGRWEN--KELFKLRDAKGRNYCLSATCEEDVTWLMSECLESYKDLPSLVYQIGTKYRD 149 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 ELRPR G++RSREFLMKDAYSF + + ++KM Y +IF L + A+ G Sbjct: 150 ELRPRGGLLRSREFLMKDAYSFHADSQDAMQMFHKMKQVYDQIFTDLKVPFKSAAADCGS 209 Query: 202 IGGDLSHEFIVLADTGETQVF 222 IGG+LS E+ + + GE ++ Sbjct: 210 IGGELSREYHYIHEKGEDVLY 230 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 8/140 (5%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IEVGH FY G YS + A + + ++MG YGIG R+V A+ + + D +G+ WP Sbjct: 381 IEVGHCFYLGRTYSEALGAAVRMRTNETTTLEMGCYGIGISRLVGAIADVTRDSQGLCWP 440 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 VAP+K+SL N D E + S + + + G +G+ ++ LG P Sbjct: 441 SCVAPYKVSL-NYAGED-------ENVRTVRSLLSLEPYESPAGTSLGASLQLSQQLGIP 492 Query: 402 LQVIVGSKFVSDSKVEIKHR 421 L VIVG K ++E++ R Sbjct: 493 LSVIVGKKSWPHVEIEVRGR 512 >gi|326474290|gb|EGD98299.1| prolyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 631 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 82/207 (39%), Positives = 120/207 (57%), Gaps = 1/207 (0%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 + S+ L++R G + Q G++ LPLG + + + +I + + A ++S+ +L S L Sbjct: 59 VDSNDLLIRAGFLRQPYSGVFHLLPLGLRVQEKLERLIDKHMRKLSAAKLSLSSLSSQAL 118 Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 W +SGR E+ R DR + PTHEE +T + IKSYR+LP YQI K+ Sbjct: 119 WKKSGRLHDDDSEVFRFVDRKKTPFLLAPTHEEEITSVVSGLIKSYRDLPLRVYQISRKY 178 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE RPR G++R REF+MKD Y+FD T + +YN + +Y+ +F L L + A S Sbjct: 179 RDEPRPRHGLLRGREFVMKDLYTFDSTEAEAIKTYNTVKEAYISLFKELKLPYVVASASS 238 Query: 200 GPIGGDLSHEFIVLADTGE-TQVFCSK 225 G +GG+LSHEF + GE T V CSK Sbjct: 239 GNMGGNLSHEFHSPSPKGEDTIVSCSK 265 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 96/178 (53%), Gaps = 14/178 (7%) Query: 280 RGIEVGHIFYFGTKYSLPMSA-------TFKGAD--GKDHYV--QMGSYGIGAMRVVAAV 328 + IE+ H F+ GT+YS + A + GA+ GK V QMG +GIG R+++AV Sbjct: 454 QSIELAHTFHLGTRYSEVLQANVSINPASLPGAEKKGKQELVPIQMGCHGIGVSRMISAV 513 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + D KG+ WP ++APF++ ++ K ++ + I + ++ D DD + Sbjct: 514 SDILADEKGLNWPQAIAPFQVVVVPGKGLEKEG-ELVYDIVTQNTQQLIDTILDDRKKDF 572 Query: 389 GSQFAVADLLGFPLQVIVG-SKFVSDSKVEIK-HRLTGIREDMSLEEVINYASHRFSN 444 + AD +G+P+ + VG + + + +KVE++ RL +R +SLEEV + S SN Sbjct: 573 AWKLRDADTIGYPIILAVGKNSWGAGNKVEVQCRRLGNLRTQVSLEEVPEFVSSLLSN 630 >gi|317030877|ref|XP_001392403.2| prolyl-tRNA synthetase [Aspergillus niger CBS 513.88] Length = 576 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 86/240 (35%), Positives = 131/240 (54%), Gaps = 19/240 (7%) Query: 2 RRSKYFLPI--LQENPRDAEIA-SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 R S +++P + + P E ++ L++R G + Q GI+ LPLG + D + +I Sbjct: 9 RVSNFWIPTGGITKKPVQGEKEDANDLLIRGGFLRQAYSGIFHMLPLGLRVQDKLERLI- 67 Query: 59 EEQNRT-------------GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMI 105 ++ RT GA ++S+ +L + +LW +SGR G E+ R DR + + Sbjct: 68 DKHMRTVVIEFFLIGWISAGASKVSLSSLSAQELWEQSGRLKE-GSEIFRFQDRKESRFL 126 Query: 106 YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PTHEE +T + KSYR+LP YQI K+RDE RPR G++R REF+MKD Y+FD Sbjct: 127 LAPTHEEEITTLVGHLTKSYRDLPVRVYQISRKYRDEQRPRQGLLRGREFIMKDLYTFDY 186 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CS 224 E + +Y + +Y +F L + + A+SG +GG LSHEF ++ GE V CS Sbjct: 187 NAENALKTYTAVKKAYTELFDELKIPYLVAAADSGNMGGSLSHEFHFASNKGEDTVXSCS 246 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 78/135 (57%), Gaps = 9/135 (6%) Query: 308 KDHYV--QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 KD V QMG +GIG R+++AV ++ D KG+ WP ++AP+++ ++ K ++ Sbjct: 438 KDQLVPMQMGCHGIGVSRMISAVADNLADSKGLNWPRAIAPYEVIVVPAKGMEE----EA 493 Query: 366 EKIYARLSK---VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +IY L+ DV DD +Q+G + ADL+G+P+ V+VG + +E++ R Sbjct: 494 VQIYDALTSEPTTALDVILDDRDKQMGWKLGDADLIGYPVIVVVGKGWKKQRTLEVQCRR 553 Query: 423 TGIREDMSLEEVINY 437 +RED++LE + + Sbjct: 554 LEVREDVALEALPEF 568 >gi|14970558|emb|CAC44360.1| ProS protein [Erwinia chrysanthemi] Length = 224 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF G KYS + AT +G DG++ + MG Sbjct: 36 VADIRNVVEGDRSPDGKGTLLIKRGIEVGHIFQLGKKYSEALKATVQGEDGRNQTLTMGC 95 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RV+AA IE +HD +GIIWPD++APF+++++ + H ++ E IY +L Sbjct: 96 YGIGVTRVIAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVQEVAEGIYQQLRAN 155 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +++G + + + ++E KHR G +E + +++ Sbjct: 156 GVDVLLDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIV 215 Query: 436 NY 437 + Sbjct: 216 EF 217 >gi|171688027|ref|XP_001908954.1| hypothetical protein [Podospora anserina S mat+] gi|170943975|emb|CAP69627.1| unnamed protein product [Podospora anserina S mat+] Length = 577 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 123/222 (55%), Gaps = 2/222 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAII-REE 60 R S+ + P ++ P H ++R G + GI+ LPLG++ + ++ R Sbjct: 8 RLSRVWFPT-KKRPASGVENGHAKLIRAGFLRPSHAGIFHMLPLGRRVQTKLEELVARHM 66 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ A +S+ + S LW +SGR ++ E+ + +DR + + PTHEE +T + Sbjct: 67 EHMLAASRVSLSAVSSQSLWDKSGRLENTASELFKFSDRKNVGYLLAPTHEEEITALVAQ 126 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 K+ ++LP +QI K+RDE RPR G++R REF+MKD Y+FD + E + +Y+ + + Sbjct: 127 TAKTAKDLPLRLFQITPKYRDEFRPRHGLLRGREFVMKDLYTFDSSKESALETYDNVRLV 186 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 Y +IF + L + +A SG +GG+LSHE+ + GE V Sbjct: 187 YSQIFEEMKLPVLAAKASSGNMGGNLSHEYHLPTPLGEDHVI 228 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 95/165 (57%), Gaps = 11/165 (6%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV--QMGSYGIGAMRVVAAVIESSHDG 335 + + +E+GH FY GT+YS + AT + + V QMG YGIG R++ AV E D Sbjct: 405 AEKAMELGHTFYLGTRYSEALGATILVPNDERKAVPMQMGCYGIGISRILGAVAELLMDE 464 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG------CDVFWDDMGEQIG 389 KG+ WP ++AP+ ++ D+ +DA E +Y +++++G DV DD + + Sbjct: 465 KGLNWPVAIAPYSCVIVMGAGVDE--QDAVE-VYRQINQIGRVQAKYLDVVLDDRQKTLP 521 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + ADL GFP+ V +G ++++ ++E++ R G+++ + + E+ Sbjct: 522 WKLMDADLAGFPIIVTLGREWLAAKRLEVQCRRLGVKQAVGITEL 566 >gi|258620049|ref|ZP_05715089.1| prolyl-tRNA synthetase [Vibrio mimicus VM573] gi|258587782|gb|EEW12491.1| prolyl-tRNA synthetase [Vibrio mimicus VM573] Length = 459 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 107/165 (64%), Gaps = 1/165 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GT YS M+ ++GK+ ++MG YGIG RVVAA IE +HD GII Sbjct: 295 RGIEVGHIFQLGTNYSAKMNCGVLDSNGKNAILEMGCYGIGVSRVVAAAIEQNHDDYGII 354 Query: 340 WPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WPD++APF+++++ + H + ++A EK+YA L+ G +V +DD E+ G F+ +L+ Sbjct: 355 WPDAIAPFQVAIVPMNMHKSERVQEAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELI 414 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P VI+G + + + E K+R G +E +++E +I++ + + Sbjct: 415 GVPHTVIIGDRSMDEGHFEYKNRRNGEKEAVAMESIIDFIQAKLA 459 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 59/114 (51%), Positives = 79/114 (69%) Query: 113 VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 ++T + R+ + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + Sbjct: 1 MITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLQK 60 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 SY+ M +Y + F R+GL P+ A+SG IGG+ S EF VLA++GE + S + Sbjct: 61 SYDAMHAAYCKAFDRMGLDYRPVLADSGAIGGNGSQEFHVLAESGEDLIVFSTE 114 >gi|296816643|ref|XP_002848658.1| prolyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238839111|gb|EEQ28773.1| prolyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 589 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 121/203 (59%), Gaps = 3/203 (1%) Query: 26 MLRTGMIHQHS--KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVES 83 +LR G + ++ G++ LPLG + + + +I + + A ++S+ +L S LW +S Sbjct: 22 ILRAGCLQKYHPYSGVFHLLPLGLRVQEKLERLIDKHMRKLNASKLSLSSLSSQSLWKKS 81 Query: 84 GRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDEL 143 GR E+ RL DR ++ PTHEE +T + S +KSYR+LP YQI K+RDE Sbjct: 82 GRLHEGDSEVFRLLDRKKTPLLLAPTHEEEITTVISSLVKSYRDLPLRVYQISRKYRDEP 141 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 RPR G++R REF+MKD Y+FD T + ++YN + +Y+ +F L L + A SG +G Sbjct: 142 RPRHGLLRGREFVMKDLYTFDSTEAEAINTYNTVKDAYMELFEELKLPFVVASAASGNMG 201 Query: 204 GDLSHEFIVLADTGE-TQVFCSK 225 G+LSHEF + GE T V CS+ Sbjct: 202 GNLSHEFHFPSSKGEDTIVSCSQ 224 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 93/176 (52%), Gaps = 13/176 (7%) Query: 280 RGIEVGHIFYFGTKYSLPMSATF--------KGADGKDHYV--QMGSYGIGAMRVVAAVI 329 + IE+ H F+ GT+YS + A +G GK V QMG +GIG R+++AV Sbjct: 413 QAIELAHTFHLGTRYSGVLQANVAINPATLEEGQQGKTELVPIQMGCHGIGVSRMISAVS 472 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + D KG+ WP ++APF+++++ K ++ + + + + D DD + Sbjct: 473 DILADNKGLNWPQAIAPFQVAVVPAKGLEKEAELVYDSVAGQNGET-VDTILDDRNKDFI 531 Query: 390 SQFAVADLLGFPLQVIVGSK-FVSDSKVEIKHR-LTGIREDMSLEEVINYASHRFS 443 + ADL+G+P+ + VG K + + ++VE++ R L +R +SLEE+ S S Sbjct: 532 WKLRDADLVGYPIILAVGKKSWNAGNQVEVQCRQLENLRTTVSLEEIPKLVSSLLS 587 >gi|255940600|ref|XP_002561069.1| Pc16g07440 [Penicillium chrysogenum Wisconsin 54-1255] gi|211585692|emb|CAP93414.1| Pc16g07440 [Penicillium chrysogenum Wisconsin 54-1255] Length = 630 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 132/227 (58%), Gaps = 5/227 (2%) Query: 2 RRSKYFLPI--LQENPRDAEIA-SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 R S ++P + + P D E ++ L++R G + Q G++ LPLG + D + +I Sbjct: 35 RVSNIWIPTGGISKKPVDGEKEDANDLLVRAGFLRQAYSGVFHLLPLGLRVQDKLEHLID 94 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 + + GA ++S+ ++ S +LW +SGR + G E+ R DR + PTHEE +T + Sbjct: 95 KHMSSLGASKVSLSSISSQELWKQSGRL-TDGSELFRFNDRKGTPFLLAPTHEEEITTLV 153 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 SY++LP YQI K+RDE RPR G++R REF+MKD Y+FD + + + +Y+ + Sbjct: 154 GHLTTSYKSLPLRVYQISRKYRDEARPRQGLLRGREFIMKDLYTFDYSVDEALKTYDAVK 213 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CS 224 +Y +F+ L + + A+SG +GG LSHE+ ++ GE +V CS Sbjct: 214 SAYTELFNELKIPYLVAAADSGNMGGSLSHEYHFISPKGEDEVVSCS 260 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 23/190 (12%) Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK--------------GADG 307 VH+ S +E+GH F+ GT+YS ++A+ + Sbjct: 432 VHDGDRCSQCAHGSLTSHSAVELGHTFHLGTRYSKVLNASVSVNSALLEGSSELDAKSSA 491 Query: 308 KDHYV--QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 K+ V QMG +GIG R+++AV D KG+ WP ++AP+++ +++ K + V Sbjct: 492 KEQIVPMQMGCHGIGVSRMISAVANRLADSKGLNWPRAMAPYEVVVVSGKGLETV----A 547 Query: 366 EKIYARLS---KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++Y L+ DV DD + +G + ADL+G+P+ V+VG+ + +E++ R Sbjct: 548 DQVYDSLTGGAAASLDVILDDRDKGMGWKLGDADLIGYPIIVVVGNGWKKKETLEVQCRR 607 Query: 423 TGIREDMSLE 432 ++ED+SL+ Sbjct: 608 LDVKEDVSLD 617 >gi|315049859|ref|XP_003174304.1| prolyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311342271|gb|EFR01474.1| prolyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 631 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 121/207 (58%), Gaps = 1/207 (0%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 + S+ L++R G + Q G++ LPLG + + + +I + + A ++S+ +L S L Sbjct: 59 VDSNDLLIRAGFLRQPYSGVFHLLPLGLRVQEKLERLIDKHMRKLSASKLSLSSLSSQAL 118 Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 W +SGR + E+ R DR + PTHEE +T + IKSYR+LP YQI K+ Sbjct: 119 WKKSGRLHNDDSEVFRFVDRKKTPFLLAPTHEEEITTLVSGLIKSYRDLPLRVYQISRKY 178 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE RPR G++R REF+MKD Y+FD T + +YN + +Y+ +F L + + A S Sbjct: 179 RDEPRPRHGLLRGREFVMKDLYTFDSTEGEAIKTYNTVKDAYISLFKELKIPYVVASASS 238 Query: 200 GPIGGDLSHEFIVLADTGE-TQVFCSK 225 G +GG+LSHEF + GE T V CSK Sbjct: 239 GNMGGNLSHEFHFPSPKGEDTVVSCSK 265 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 14/177 (7%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFK---------GADGKDHYV--QMGSYGIGAMRVVAAV 328 + IE+ H F+ GT+YS + A G GK V QMG +GIG R+++AV Sbjct: 454 QSIELAHTFHLGTRYSDVLQANVSINPAILANAGQKGKQEPVPIQMGCHGIGVSRMISAV 513 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + D KG+ WP ++APF+++++ K ++ + + R ++ D DD + Sbjct: 514 SDILADEKGLNWPQAIAPFQVAVVPGKGLEKEA-ELVYDVVTRNTQQPIDTILDDRKKDF 572 Query: 389 GSQFAVADLLGFPLQVIVG-SKFVSDSKVEIK-HRLTGIREDMSLEEVINYASHRFS 443 + ADL+G+P+ + VG + + + +KVE++ RL +R +SLEEV S S Sbjct: 573 AWKLRDADLIGYPVILAVGKNSWSAGNKVEVQCRRLGNLRTKISLEEVPELVSSLLS 629 >gi|145608824|ref|XP_369830.2| hypothetical protein MGG_06345 [Magnaporthe oryzae 70-15] gi|145016254|gb|EDK00744.1| hypothetical protein MGG_06345 [Magnaporthe oryzae 70-15] Length = 617 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 115/205 (56%), Gaps = 20/205 (9%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +H+ ++R G + Q + GI+ +PLG + D + +I + GA +++ TL S +W Sbjct: 42 AHEKLVRAGYLRQANAGIFHLMPLGYRVQDKIMKLIEKHMQSIGASRLALATLSSPGIWA 101 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 +SGR++ KAM EE +T + + + SY+ LP YQI KFRD Sbjct: 102 KSGRFE--------------KAMT-----EEEITTLVKHTLSSYKQLPARLYQITPKFRD 142 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 E+RPR G++R REF+MKD Y+FDL+ + +Y ++ +Y RIF L L + A SG Sbjct: 143 EMRPRKGLLRGREFMMKDLYTFDLSVNTALQTYEQVRAAYDRIFSELRLPVMVAEASSGD 202 Query: 202 IGGDLSHEFIVLADTGETQVF-CSK 225 IGGDLSHE+ + GE V CS+ Sbjct: 203 IGGDLSHEYHLPTSEGEDDVISCSR 227 Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 39/189 (20%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFK------GADGKDHY-------------------VQM 314 + E+GH F+ G +YS PM T K G + VQM Sbjct: 423 KATELGHTFHLGDRYSEPMGLTVKLPNTSQAESGSNTVSDEEGQIYSFSSKRQGEVNVQM 482 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G +GIG R++AAV E D +G+ WP ++AP+++++I + DA E IY LS+ Sbjct: 483 GCHGIGVSRIIAAVAEHFGDSRGLNWPRAIAPYEVAIITKNS----LGDA-ESIYDLLSE 537 Query: 375 VGC---------DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 G D+ DD + + + ADL+G+P+ V++G +V + E++ R Sbjct: 538 GGAIATPAFPKPDLVLDDRDKTLPWKLKDADLVGYPVVVVLGKAWVESKQCEVQCRQLSF 597 Query: 426 REDMSLEEV 434 +E ++L+ + Sbjct: 598 KELVALDNL 606 >gi|327293800|ref|XP_003231596.1| prolyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326466224|gb|EGD91677.1| prolyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 631 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 85/225 (37%), Positives = 125/225 (55%), Gaps = 1/225 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S +++P + S+ L++R G + Q G++ LPLG + + + +I + Sbjct: 41 RASSFWIPSGGIAESKNGVDSNDLLIRAGFLRQPYSGVFHLLPLGLRVQEKLERLIDKYM 100 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + A ++S+ +L S LW +SGR E+ R DR + PTHEE +T + Sbjct: 101 RKLSASKLSLSSLSSQALWKKSGRLHDDDSEVFRFVDRKKTPFLLAPTHEEEITSVVSGL 160 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 IKSYR+LP YQI K+RDE RPR G++R REF+MKD Y+FD T + +YN + +Y Sbjct: 161 IKSYRDLPLRVYQISRKYRDEPRPRHGLLRGREFVMKDLYTFDSTEAEAIKTYNTVKEAY 220 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 +F L L + A SG +GG+LSHEF + GE T V CSK Sbjct: 221 SSLFKELKLPYVVASASSGNMGGNLSHEFHFPSPKGEDTIVSCSK 265 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 14/177 (7%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFK---------GADGKDHYV--QMGSYGIGAMRVVAAV 328 + IE+ H F+ GT+YS + A G GK V QMG +GIG R+++AV Sbjct: 454 QSIELAHTFHLGTRYSEVLQANVTINPAILAGAGQKGKPEPVPIQMGCHGIGVSRMISAV 513 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + D KG+ WP ++APF++ ++ K ++ + I + +K D DD + Sbjct: 514 SDILADEKGLNWPQAIAPFQVVVVPGKGLEKEG-ELVYDIVTQKTKQPIDTILDDRKKDF 572 Query: 389 GSQFAVADLLGFPLQVIVG-SKFVSDSKVEIK-HRLTGIREDMSLEEVINYASHRFS 443 + AD++G+P+ + VG + + + +KVE++ RL +R +SLEEV + S S Sbjct: 573 AWKLRDADIIGYPIILAVGKNSWGAGNKVEVQCRRLGNLRTKVSLEEVPEFVSSLLS 629 >gi|307069651|ref|YP_003878128.1| putative prolyl-tRNA synthetase [Candidatus Zinderia insecticola CARI] gi|306482911|gb|ADM89782.1| putative prolyl-tRNA synthetase [Candidatus Zinderia insecticola CARI] Length = 553 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 127/224 (56%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M K+F+ L++ + + K++ + GMI + S GIY+++P+ L + +II E Sbjct: 1 MLAKKFFIFTLKKILSNINNKTLKIINKIGMIKKISSGIYTYMPILLLILKKIKSIINYE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ +P +Q +++W ++ R+ E+L+ +R K + PT EE++T I + Sbjct: 61 MKKNNITEILMPIIQPSNIWKKTKRWYKMKNELLKFKNRKKKYFVMQPTSEELITYIIKK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + +Y+ LP FY IQ KFRDELR + G++R +EF+MKDAYSFD++ + S +Y M Sbjct: 121 ELLNYKQLPLIFYNIQNKFRDELRCKSGLIRLKEFIMKDAYSFDISFKNSIKNYKLMLNI 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y IF+++ LK ++ + + +SHEF ++ CS Sbjct: 181 YKNIFNKINLKFKILKTNNKNMEWIISHEFHIITKNSNNYFLCS 224 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 88/166 (53%), Gaps = 3/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + IE+ HIF G YS +++ + + K + MGSYGIG R++ +IE + D GI Sbjct: 387 KKSIEIAHIFLLGKFYSRLINSKYINYNNKKKFFFMGSYGIGISRLLQIIIEKNIDKIGI 446 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 WP+++ PF + + IK ++ + + IY +L + ++ D+ IG +L+ Sbjct: 447 KWPNNLIPFNLVICFIKNNNYI-KKISYFIYYKLLLLNINLIIDNRNINIGYMLNDWELI 505 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR-LTGIREDMSLEEVINYASHRFS 443 G P +IVG+ F+ + + K R I +++++ ++ + ++ + Sbjct: 506 GIPNYIIVGN-FIKKNIISYKVRKKKNIYKNININKIFKFIFNKIN 550 >gi|241958042|ref|XP_002421740.1| prolyl-tRNA synthetase, cytoplasmic, putative [Candida dubliniensis CD36] gi|223645085|emb|CAX39680.1| prolyl-tRNA synthetase, cytoplasmic, putative [Candida dubliniensis CD36] Length = 567 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 120/208 (57%), Gaps = 5/208 (2%) Query: 19 EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD 78 +I +H+++ + G I G+ +W +G + +N IIR+ + E+S+ + D Sbjct: 29 QIPTHEVLTKLGYITYPRAGLVNWSKMGLLIQNKINQIIRQRMDEINFEEISLSLISHKD 88 Query: 79 LWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 LW + R+D +E+ +L D+ ++ EE+ + + ++SY+N P YQI K Sbjct: 89 LWKLTNRWDQ--EEIFKLV--GDEYLLVPTAEEEITNYVKKQFLESYKNFPVGLYQINPK 144 Query: 139 FRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE 198 FR+E RPR G++R +EFLMKDAYSFDL + +Y K+ +Y +IF LG+ + A+ Sbjct: 145 FRNEKRPRGGLLRGKEFLMKDAYSFDLNESEAMKTYEKVVGAYHKIFQDLGIPYVKAEAD 204 Query: 199 SGPIGGDLSHEFIVLADTGETQVF-CSK 225 SG IGG LSHE+ L +GE VF C++ Sbjct: 205 SGDIGGSLSHEWHYLNSSGEDTVFECNE 232 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 79/143 (55%), Gaps = 10/143 (6%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFK----GADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 ++ IEVGH FY G KYS P+ + + + MG YGIG R++AA+ E + Sbjct: 365 ASSAIEVGHTFYLGDKYSKPLDLEVDVPTLNNNIEKQRIMMGCYGIGISRIIAAIAEINR 424 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRD------ACEKIYARLSKVGCDVFWDDMGEQ 387 D KG+ WP S+AP++++++ + Q D +++Y L++ D D+ + Sbjct: 425 DEKGLKWPRSIAPWEVTIVEVSQQKQSTNDNDNPQENFKEVYNILNEANIDYRLDNRSDS 484 Query: 388 IGSQFAVADLLGFPLQVIVGSKF 410 +G + ++L+G PL +I+G+++ Sbjct: 485 MGKKLKQSNLIGIPLSIILGNQY 507 >gi|145640808|ref|ZP_01796390.1| prolyl-tRNA synthetase [Haemophilus influenzae R3021] gi|145274322|gb|EDK14186.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.4-21] Length = 430 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 71/167 (42%), Positives = 104/167 (62%), Gaps = 2/167 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF G KYS M AT +G DGK + MG YGIG RVVA+ IE HD +GII Sbjct: 263 RGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDDRGII 322 Query: 340 WP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 WP D +APF ++++ + H + + E++Y L G DV +DD E+ G FA +L Sbjct: 323 WPSDEIAPFTVAIVPMNMHKSESVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMEL 382 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P VI+G K + + ++E K+R TG +E +S +++++ + + N Sbjct: 383 IGVPHMVIIGEKNLDNGEIEYKNRRTGEKEMISKDQLLSVLNEKLGN 429 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 46/84 (54%), Positives = 59/84 (70%) Query: 143 LRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPI 202 +RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Y IF+RLGL ++A++G I Sbjct: 1 MRPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQVYSNIFNRLGLDFRAVQADTGSI 60 Query: 203 GGDLSHEFIVLADTGETQVFCSKD 226 GG SHEF VLA +GE V S + Sbjct: 61 GGSASHEFQVLASSGEDDVVFSTE 84 >gi|302657268|ref|XP_003020359.1| hypothetical protein TRV_05552 [Trichophyton verrucosum HKI 0517] gi|291184187|gb|EFE39741.1| hypothetical protein TRV_05552 [Trichophyton verrucosum HKI 0517] Length = 581 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 G+ + G++ LPLG + + + +I + + A ++S+ +L S LW +SGR Sbjct: 19 GIAESKNGGVFHLLPLGLRVQEKLERLIDKHMRKLNASKLSLSSLSSQALWKKSGRLHDD 78 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 E+ R DR + PTHEE +T + IKSYR+LP YQI K+RDE RPR G+ Sbjct: 79 DSEVFRFVDRKKTPFLLAPTHEEEITTVVSGLIKSYRDLPLRVYQISRKYRDEPRPRHGL 138 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R REF+MKD Y+FD T + +YN + +Y+ +F L L + A SG +GG+LSHE Sbjct: 139 LRGREFVMKDLYTFDSTEAEAIKTYNTVKEAYISLFKELKLPYVVASASSGNMGGNLSHE 198 Query: 210 FIVLADTGE-TQVFCSK 225 F + GE T V CSK Sbjct: 199 FHFPSPKGEDTIVSCSK 215 Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 14/178 (7%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFK---------GADGKDHYV--QMGSYGIGAMRVVAAV 328 + IE+ H F+ GT+YS + A G GK V QMG +GIG R+++AV Sbjct: 404 QSIELAHTFHLGTRYSEVLQANVSINPAILAGAGQKGKQEPVPIQMGCHGIGVSRMISAV 463 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + D KG+ WP ++APF+++++ K ++ + I + ++ D DD + Sbjct: 464 SDILADEKGLNWPQAIAPFQVAVVPGKGLEKEG-ELVYDIVTQTTQQPIDTILDDRKKDF 522 Query: 389 GSQFAVADLLGFPLQVIVG-SKFVSDSKVEIK-HRLTGIREDMSLEEVINYASHRFSN 444 + AD++G+P+ + VG + + + +KVE++ RL +R +SLEEV S S Sbjct: 523 AWKLRDADMIGYPIILAVGKNSWGAGNKVEVQCRRLGNLRTKVSLEEVPELVSSLLSQ 580 >gi|222873081|gb|EEF10212.1| predicted protein [Populus trichocarpa] Length = 264 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 74/188 (39%), Positives = 110/188 (58%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ A RGIEVGH+FY GTKYS M+ATF +GK +MG Sbjct: 30 VADLRNVVAGDKSPDGAGELAIERGIEVGHVFYLGTKYSQAMNATFLAENGKPSLFEMGC 89 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + + I + ++A EK++A L + Sbjct: 90 YGIGVTRLPAAAIEQNHDERGIIWPDAIAPFTVVVCPIGMDRSEPVKEAAEKLHAELLAL 149 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G+ FA +L+G P +V++ + + + +VE +HR M+ +V+ Sbjct: 150 GVDVILDDRGERPGAMFADWELIGVPHRVVLSDRGLKEGQVEYQHRRDTEATKMAAADVL 209 Query: 436 NYASHRFS 443 + R Sbjct: 210 GHLKQRLG 217 >gi|134076914|emb|CAK45323.1| unnamed protein product [Aspergillus niger] Length = 497 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 73/183 (39%), Positives = 106/183 (57%), Gaps = 2/183 (1%) Query: 43 LPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK 102 LPLG + D + +I + GA ++S+ +L + +LW +SGR G E+ R DR + Sbjct: 2 LPLGLRVQDKLERLIDKHMRTVGASKVSLSSLSAQELWEQSGRLKE-GSEIFRFQDRKES 60 Query: 103 AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 + PTHEE +T + KSYR+LP YQI K+RDE RPR G++R REF+MKD Y+ Sbjct: 61 RFLLAPTHEEEITTLVGHLTKSYRDLPVRVYQISRKYRDEQRPRQGLLRGREFIMKDLYT 120 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 FD E + +Y + +Y +F L + + A+SG +GG LSHEF ++ GE V Sbjct: 121 FDYNAENALKTYTAVKKAYTELFDELKIPYLVAAADSGNMGGSLSHEFHFASNKGEDTVX 180 Query: 223 -CS 224 CS Sbjct: 181 SCS 183 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 78/135 (57%), Gaps = 9/135 (6%) Query: 308 KDHYV--QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 KD V QMG +GIG R+++AV ++ D KG+ WP ++AP+++ ++ K ++ Sbjct: 359 KDQLVPMQMGCHGIGVSRMISAVADNLADSKGLNWPRAIAPYEVIVVPAKGMEE----EA 414 Query: 366 EKIYARLSK---VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +IY L+ DV DD +Q+G + ADL+G+P+ V+VG + +E++ R Sbjct: 415 VQIYDALTSEPTTALDVILDDRDKQMGWKLGDADLIGYPVIVVVGKGWKKQRTLEVQCRR 474 Query: 423 TGIREDMSLEEVINY 437 +RED++LE + + Sbjct: 475 LEVREDVALEALPEF 489 >gi|327357537|gb|EGE86394.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 601 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 84/249 (33%), Positives = 135/249 (54%), Gaps = 19/249 (7%) Query: 25 LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESG 84 L+++ G + Q G++ LPLG + + + ++ + GA ++S+ ++ S LW +SG Sbjct: 30 LLIQGGFLRQAYSGVFHMLPLGLRVQEKLERLVDKHMRTLGASKLSLSSISSQALWEKSG 89 Query: 85 RYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 R E + DR + + PTHEE +T + + SYR+LP YQI K+RDE R Sbjct: 90 RLKK-DSEFFKFQDRKEARFLLAPTHEEEITSLVAGAVNSYRDLPLRVYQISRKYRDEPR 148 Query: 145 PRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGG 204 PR G++R REF+MKD Y+FD +PE + +Y+ + +Y+R+F L + + A+SG +GG Sbjct: 149 PRQGLLRGREFIMKDLYTFDYSPETAIKTYSAVKKAYIRLFDELRIPYMIATADSGNMGG 208 Query: 205 DLSHEFIVLADTGE-TQVFCS-------------KDFMDFPIPSENTDFDDIISLNSIVE 250 LSHEF + GE T + CS K + D P N + D L++ +E Sbjct: 209 SLSHEFHLPNPKGEDTIISCSSCGNVYNEELSDGKAYEDL-TPPANPNLD---KLSAGLE 264 Query: 251 QWTAPYAAT 259 + AP +T Sbjct: 265 EQQAPAIST 273 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 98/171 (57%), Gaps = 21/171 (12%) Query: 281 GIEVGHIFYFGTKYS--------LPMSATFKGADGKDHY-----VQMGSYGIGAMRVVAA 327 IE+ H F+ GT+YS +P++ G+ D ++MG +GIG R+++A Sbjct: 424 AIELAHTFHLGTRYSKVLNASVAVPLTLLKDGSKTDDTSTLSVPLEMGCHGIGVSRMISA 483 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS--KVGC-DVFWDDM 384 V ++ D KG+ WP ++APF++ +I D+ E++Y ++ ++G DV DD Sbjct: 484 VADTLADSKGLNWPRAIAPFEVIIIP----DKGLEGEAERVYDDINGRQIGAVDVIVDDR 539 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEV 434 I + ADL+G+P+ +++G + +++K+E++ RL +RE +SL+++ Sbjct: 540 DRNIPWKLRDADLIGYPVIIVIGKSWKTENKLEVQCRRLNNLRETVSLQDL 590 >gi|150866832|ref|XP_001386559.2| prolyl-tRNA synthetase, cytoplasmic [Scheffersomyces stipitis CBS 6054] gi|149388088|gb|ABN68530.2| prolyl-tRNA synthetase, cytoplasmic [Scheffersomyces stipitis CBS 6054] Length = 572 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 119/203 (58%), Gaps = 4/203 (1%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 + +H+L+++ +I+Q G+ +W P+G ++ ++ IIR + E+ + L Sbjct: 29 LPTHELLVQLNLINQPRAGLVNWSPIGLTIMNKISDIIRRRMDEISFEEVKLSLLSHHSS 88 Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 W ++GR+D+ E+ +L + I PT EE + + ++ SY+NLP +YQI KF Sbjct: 89 WRKTGRWDN-SSELFKLKG---EEYILSPTAEEDIVNYVSNNSSSYKNLPLLYYQINPKF 144 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 R+E RPR G++R +EF+MKDAYSFD + + + +Y + +Y +IF L L A+S Sbjct: 145 RNEKRPRGGLLRGKEFMMKDAYSFDASEKDAMTTYQSVIGAYTKIFGDLKLPYTKAEADS 204 Query: 200 GPIGGDLSHEFIVLADTGETQVF 222 G IGG LSHE+ + DTGE ++ Sbjct: 205 GDIGGSLSHEWHYIDDTGEDIIY 227 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 29/196 (14%) Query: 226 DFMDFPIPSEN----TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARG 281 +F DFPI N T F DI +++I +L E S + Sbjct: 331 NFPDFPISFINRSLITTFTDIPIISAI---------------EGELCGKCEEGHLHSNKA 375 Query: 282 IEVGHIFYFGTKYSLPMSATF------KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 IEVGH FY G KYS P+ + KG + + + MG YGIG R++A++ E + D Sbjct: 376 IEVGHTFYLGDKYSKPLDCSMDFPVNEKGQVERRNLI-MGCYGIGVSRIIASIGEINRDD 434 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAV 394 KG+ WP S+AP+ +++ I+ ++ E Y L+ D D+ + +G + Sbjct: 435 KGLNWPQSIAPWTMTI--IEGAKSESGESYESFYNTLNDNSVDYRLDNRAKIGLGKKINQ 492 Query: 395 ADLLGFPLQVIVGSKF 410 ++LLG PL VI+G ++ Sbjct: 493 SNLLGIPLAVILGKQY 508 >gi|223041833|ref|ZP_03612022.1| prolyl-tRNA synthetase [Actinobacillus minor 202] gi|223017360|gb|EEF15782.1| prolyl-tRNA synthetase [Actinobacillus minor 202] Length = 263 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 76/184 (41%), Positives = 111/184 (60%), Gaps = 4/184 (2%) Query: 261 DVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K V RGIEVGHIF GTKYS M AT +G DGK + MG YG Sbjct: 76 DLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGKPLIMTMGCYG 135 Query: 319 IGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVG 376 IG RVVAA IE HD +GIIWP D +APF ++++ + H + + E++Y L G Sbjct: 136 IGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMHKSEKVQAFAEELYKTLKAQG 195 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV +DD E+ G FA +L+G P V++G K + + ++E K+R TG ++ ++ E+++ Sbjct: 196 VDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLENGEIEYKNRRTGEKQMIAKEQLLA 255 Query: 437 YASH 440 + + Sbjct: 256 FLAE 259 >gi|145640807|ref|ZP_01796389.1| prolyl-tRNA synthetase [Haemophilus influenzae R3021] gi|145274321|gb|EDK14185.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.4-21] Length = 125 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 59/116 (50%), Positives = 82/116 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTD 116 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGNRNFVLGPTHEEVITD 116 >gi|229019013|ref|ZP_04175855.1| Prolyl-tRNA synthetase [Bacillus cereus AH1273] gi|228742341|gb|EEL92499.1| Prolyl-tRNA synthetase [Bacillus cereus AH1273] Length = 445 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GT+YS M+ATF +GK + MG YGIG R VAA+ E +D G+ Sbjct: 282 ARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLIMGCYGIGVSRTVAAIAEQFNDENGL 341 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP +VAPF + +I + R+ E IY L + G +V DD E+ G +FA ADL Sbjct: 342 VWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADLF 401 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P++V VG K + VE+K R TG E++ +EE+ Y ++ Sbjct: 402 GLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 442 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 53/100 (53%), Positives = 70/100 (70%) Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ +Y Sbjct: 1 MKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKAY 60 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 IF R GL + A+SG +GG +HEF+VL++ GE + Sbjct: 61 SNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSEVGEDTI 100 >gi|217031454|ref|ZP_03436959.1| hypothetical protein HPB128_21g12 [Helicobacter pylori B128] gi|216946654|gb|EEC25250.1| hypothetical protein HPB128_21g12 [Helicobacter pylori B128] Length = 517 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 95/162 (58%) Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 GA + + + A LW +SGR D YGKE+L DR + + PT EE +T+I + IKS Sbjct: 5 GAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKNNDFVLSPTLEENITEIAANFIKS 64 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 Y+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + +Y I Sbjct: 65 YKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEI 124 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 LGL + A+SG IGG S EF+VL + GE + K+ Sbjct: 125 LSDLGLDFRIVEADSGAIGGSKSKEFVVLTECGEDTIVVCKN 166 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 352 KSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGISRLLSAILEQKSDDLGCV 411 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 412 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFELIG 471 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRE---DMSLEEVI 435 L +IVG + + + + E R ++ D+ LEE I Sbjct: 472 ERLALIVGKQTLENKEFECVKRANLEKQTIKDIELEEKI 510 >gi|2501044|sp|P78600|SYPC_CANAL RecName: Full=Prolyl-tRNA synthetase, cytoplasmic; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|1845347|gb|AAC49876.1| prolyl-tRNA synthetase [Candida albicans] Length = 575 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 120/208 (57%), Gaps = 5/208 (2%) Query: 19 EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD 78 +I +H+++ + G I G+ +W +G + ++ IIR+ + E+S+ + + Sbjct: 29 QIPTHEVLTKLGYITYPRAGLVNWSKMGLLIQNKISQIIRQRMDEIQFEEVSLSLISHKE 88 Query: 79 LWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 LW + R+D +E+ +L D+ ++ EE+ + + ++SY+N P YQI K Sbjct: 89 LWKLTNRWDQ--EEIFKLV--GDEYLLVPTAEEEITNYVKKQFLESYKNFPLALYQINPK 144 Query: 139 FRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE 198 FR+E RPR G++R +EFLMKDAYSFDL + +Y K+ +Y +IF LG+ + A+ Sbjct: 145 FRNEKRPRGGLLRGKEFLMKDAYSFDLNESEAMKTYEKVVGAYHKIFQDLGIPYVKAEAD 204 Query: 199 SGPIGGDLSHEFIVLADTGETQVF-CSK 225 SG IGG LSHE+ L +GE VF C++ Sbjct: 205 SGDIGGSLSHEWHYLNSSGEDTVFECNE 232 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 15/153 (9%) Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD----HYVQMGSYGIGAMRVVAAV 328 E K ++ IEVGH FY G KYS P+ + + MG YGIG R++AA+ Sbjct: 360 EGKLSASSAIEVGHTFYLGDKYSKPLDLEVDVPTSNNSIEKQRIMMGCYGIGISRIIAAI 419 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQV-----------CRDACEKIYARLSKVGC 377 E + D KG+ WP S+AP++++++ + Q+ +D ++IY L++ Sbjct: 420 AEINRDEKGLKWPRSIAPWEVTVVEVSKQKQLKNVNDNNHHNNPQDNFQEIYNILNQANI 479 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 D D+ + +G + +DLLG PL +I+G+++ Sbjct: 480 DYRLDNRSDSMGKKLKQSDLLGIPLSIILGNQY 512 >gi|77409695|ref|ZP_00786360.1| prolyl-tRNA synthetase [Streptococcus agalactiae COH1] gi|77171693|gb|EAO74897.1| prolyl-tRNA synthetase [Streptococcus agalactiae COH1] Length = 549 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 66/146 (45%), Positives = 90/146 (61%) Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 M P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R +KSY+ L Sbjct: 1 MLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRDAVKSYKQL 60 Query: 129 PFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 P YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y +Y IF R Sbjct: 61 PLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKAYEAIFTRA 120 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLA 214 GL + + G +GG S EF+ + Sbjct: 121 GLDFKGIIGDGGAMGGKDSQEFMAVT 146 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 94/159 (59%), Gaps = 14/159 (8%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES------- 331 ARGIE+GHIF GT+YS M A +G+ + + MG YGIG R+++AVIE Sbjct: 372 ARGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVSRILSAVIEQHARLFVN 431 Query: 332 -SHDGK-----GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 + G GI +P+ +APF + LI + DQ +D EKI A L G +V DD Sbjct: 432 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 491 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++GS+F+ +DL+G P++V VG K S+ VE+K + +G Sbjct: 492 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASG 529 >gi|238879629|gb|EEQ43267.1| conserved hypothetical protein [Candida albicans WO-1] Length = 575 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 120/208 (57%), Gaps = 5/208 (2%) Query: 19 EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD 78 +I +H+++ + G I G+ +W +G + ++ IIR+ + E+S+ + + Sbjct: 29 QIPTHEVLTKLGYITYPRAGLVNWSKMGLLIQNKISQIIRQRMDEIQFEEVSLSLISHKE 88 Query: 79 LWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 LW + R+D +E+ +L D+ ++ EE+ + + ++SY+N P YQI K Sbjct: 89 LWKLTNRWDQ--EEIFKLV--GDEYLLVPTAEEEITNYVKKQFLESYKNFPLALYQINPK 144 Query: 139 FRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE 198 FR+E RPR G++R +EFLMKDAYSFDL + +Y K+ +Y +IF LG+ + A+ Sbjct: 145 FRNEKRPRGGLLRGKEFLMKDAYSFDLNESEAMKTYEKVVGAYHKIFQDLGIPYVKAEAD 204 Query: 199 SGPIGGDLSHEFIVLADTGETQVF-CSK 225 SG IGG LSHE+ L +GE VF C++ Sbjct: 205 SGDIGGSLSHEWHYLNSSGEDTVFECNE 232 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 15/148 (10%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATF----KGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 ++ IEVGH FY G KYS P+ + + MG YGIG R++AA+ E + Sbjct: 365 ASSAIEVGHTFYLGDKYSKPLDLEVDVPTSNKSIEKQRIMMGCYGIGISRIIAAIAEINR 424 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQV-----------CRDACEKIYARLSKVGCDVFWD 382 D KG+ WP S+AP++++++ + Q+ +D ++IY L++ D D Sbjct: 425 DEKGLKWPRSIAPWEVTVVEVSKQKQLKNVNDNNHHNNPQDNFQEIYNILNQANIDYRLD 484 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + + +G + +DLLG PL +I+G+++ Sbjct: 485 NRSDSMGKKLKQSDLLGIPLSIILGNQY 512 >gi|322657153|gb|EFY53436.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322686288|gb|EFY82272.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] Length = 290 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 102 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 161 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 162 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 221 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 222 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 281 Query: 436 NY 437 +Y Sbjct: 282 DY 283 >gi|289830169|ref|ZP_06547591.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 290 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 102 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 161 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 162 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 221 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 222 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 281 Query: 436 NY 437 +Y Sbjct: 282 DY 283 >gi|189189606|ref|XP_001931142.1| prolyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972748|gb|EDU40247.1| prolyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 488 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/175 (37%), Positives = 108/175 (61%), Gaps = 1/175 (0%) Query: 51 DNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTH 110 + + +I + N GA ++S+ ++ + LW +SGRY S E+LR+ DR + + PTH Sbjct: 11 NKLEGLIDKHMNSIGASKVSLSSITTEALWRQSGRY-SANSELLRIKDRRETGFLLSPTH 69 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGS 170 EE +T + S + SY++LP YQI K+RDE RPR G++R++EF+MKD Y+FD +P+ + Sbjct: 70 EEEITALVASMVHSYKDLPLRLYQIGRKYRDERRPRGGLLRAKEFMMKDLYTFDSSPKAA 129 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 +Y + +Y +F+ L L + A+SG +GG LSHE+ + GE +F + Sbjct: 130 LETYESVRDAYNNLFNELKLPYLVADADSGNMGGKLSHEYHFASPKGEDYIFSCQ 184 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 7/187 (3%) Query: 254 APYAATSDVHNEKLFDSLPE---NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK-D 309 AP + D+ K D P K + IEVGH F+ GT+YS+P++A D Sbjct: 292 APSTCSIDITLTKPGDPCPRCATGKLNIQKAIEVGHTFHLGTRYSVPLNAVIALRDQNLS 351 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK-ISLINIKAHDQVCRDACEKI 368 V MG +GIG R++ AV D +G+ WP +AP++ I L + K ++ + + + Sbjct: 352 SPVHMGCHGIGVSRIIGAVASLLSDARGLNWPRVIAPYEAIVLSDPKTEEEDTTEVYDAL 411 Query: 369 YARLSKVGCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 D+ DD G+ +G + ADL+G+P+ V++G + D KVEI+ R G+++ Sbjct: 412 RGEERNPDIDLVLDDRAGKSLGWKLKDADLIGYPVVVVLGRSW-KDKKVEIQCRRLGVKK 470 Query: 428 DMSLEEV 434 D+ L+E+ Sbjct: 471 DVDLKEL 477 >gi|331233138|ref|XP_003329230.1| prolyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309308220|gb|EFP84811.1| prolyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 301 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/165 (43%), Positives = 103/165 (62%), Gaps = 1/165 (0%) Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 R GA E+S+P LQS LW SGR + G E+ RL DR +++ PTHEE +T++ +S Sbjct: 2 ERIGASEISMPLLQSQKLWDRSGRSNQAGPELFRLKDRKGSSLLLSPTHEEEVTNLVKSD 61 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 I+S + LP + I KFRDE RPR G++RSREF+MKD Y+FD + SY ++ +Y Sbjct: 62 IQSGKQLPIKLFHIGRKFRDEARPRAGLLRSREFIMKDLYTFDADASAAMASYKEVQEAY 121 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSK 225 RIF +G+ A+SG IGG SHE+ + +GE + + C++ Sbjct: 122 RRIFETIGIPFSVAEADSGAIGGATSHEYHYKSSSGEDSLIHCTR 166 >gi|213645917|ref|ZP_03375970.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 249 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 61 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 120 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 121 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 180 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 181 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 240 Query: 436 NY 437 +Y Sbjct: 241 DY 242 >gi|213416593|ref|ZP_03349737.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 223 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 3/182 (1%) Query: 259 TSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 35 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 94 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 95 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 154 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 155 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 214 Query: 436 NY 437 +Y Sbjct: 215 DY 216 >gi|159131195|gb|EDP56308.1| prolyl-tRNA synthetase [Aspergillus fumigatus A1163] Length = 584 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 119/204 (58%), Gaps = 11/204 (5%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +++L++R G + Q GI+ LPLG + + + +I + GA ++S+ ++ S +LW Sbjct: 19 ANELLIRGGFLRQAYSGIFHMLPLGLRVQEKLERLIDKHMRSVGASKVSLSSISSQELWE 78 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 +SGR L + ++ + PTHEE +T + S KSYR+LP YQI K+RD Sbjct: 79 QSGR----------LKEGSESRFLLAPTHEEEITTLVGSLTKSYRDLPLRVYQISRKYRD 128 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 E RPR G++R REFLMKD Y+FD + E + +YN + +Y +F L + + A+SG Sbjct: 129 EPRPRQGLLRGREFLMKDLYTFDYSVEEALKTYNLVKAAYKNLFDELKIPYLVAAADSGN 188 Query: 202 IGGDLSHEFIVLADTGE-TQVFCS 224 +GG LSHEF + GE T + CS Sbjct: 189 MGGSLSHEFHFPSSKGEDTVISCS 212 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 93/170 (54%), Gaps = 17/170 (10%) Query: 281 GIEVGHIFYFGTKYSLPMSATF-------KGADGKDHYV--QMGSYGIGAMRVVAAVIES 331 +E+GH F+ GT+YS + A+ G+ KD V QMG +GIG R+++AV +S Sbjct: 411 AVELGHTFHLGTRYSEVLQASVMVDRSLSGGSQSKDQLVPMQMGCHGIGVSRMISAVADS 470 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL---SKVGCDVFWDDMGEQI 388 D KG+ WP ++AP+++ ++ + EK+Y L D DD + + Sbjct: 471 LSDSKGLNWPRAMAPYEVVVVPGRG----LETEAEKVYDSLVSNHTSSVDAILDDRDKPM 526 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEVINY 437 G + ADL+G+P+ V+VG + +E++ RL +RED+ L+++ ++ Sbjct: 527 GWKLGDADLIGYPVIVVVGKGWKKAQTLEVQCRRLNNLREDVPLDQLPSF 576 >gi|70995366|ref|XP_752440.1| prolyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|66850075|gb|EAL90402.1| prolyl-tRNA synthetase [Aspergillus fumigatus Af293] Length = 584 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 119/204 (58%), Gaps = 11/204 (5%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +++L++R G + Q GI+ LPLG + + + +I + GA ++S+ ++ S +LW Sbjct: 19 ANELLIRGGFLRQAYSGIFHMLPLGLRVQEKLERLIDKHMRSVGASKVSLSSISSQELWE 78 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 +SGR L + ++ + PTHEE +T + S KSYR+LP YQI K+RD Sbjct: 79 QSGR----------LKEGSESRFLLAPTHEEEITTLVGSLTKSYRDLPLRVYQISRKYRD 128 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 E RPR G++R REFLMKD Y+FD + E + +YN + +Y +F L + + A+SG Sbjct: 129 EPRPRQGLLRGREFLMKDLYTFDYSVEEALKTYNLVKAAYKNLFDELKIPYLVAAADSGN 188 Query: 202 IGGDLSHEFIVLADTGE-TQVFCS 224 +GG LSHEF + GE T + CS Sbjct: 189 MGGSLSHEFHFPSSKGEDTVISCS 212 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 17/170 (10%) Query: 281 GIEVGHIFYFGTKYSLPMSATF-------KGADGKDHYV--QMGSYGIGAMRVVAAVIES 331 +E+GH F+ GT+YS + A+ G+ KD V QMG +GIG R+++AV +S Sbjct: 411 AVELGHTFHLGTRYSEVLQASVMVDRSLSGGSQSKDQLVPMQMGCHGIGVSRMISAVADS 470 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL---SKVGCDVFWDDMGEQI 388 D KG+ WP ++AP+++ ++ K EK+Y L D DD + + Sbjct: 471 LSDSKGLNWPRAMAPYEVVVVPGKG----LETEAEKVYDSLVSNHTSSVDAILDDRDKPM 526 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEVINY 437 G + ADL+G+P+ V+VG + +E++ RL +RED+ L+++ ++ Sbjct: 527 GWKLGDADLIGYPVIVVVGKGWKKAQTLEVQCRRLNNLREDVPLDQLPSF 576 >gi|121701845|ref|XP_001269187.1| prolyl-tRNA synthetase [Aspergillus clavatus NRRL 1] gi|119397330|gb|EAW07761.1| prolyl-tRNA synthetase [Aspergillus clavatus NRRL 1] Length = 553 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 75/184 (40%), Positives = 109/184 (59%), Gaps = 2/184 (1%) Query: 43 LPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK 102 LPLG + D + +I + GA ++S+ ++ S +LW +SGR G E+ R DR + Sbjct: 2 LPLGLRVQDKLERLIDKHMQSVGASKVSLSSISSQELWEQSGRLKE-GSEVFRFHDRKES 60 Query: 103 AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 + PTHEE +T + S KSYR+LP YQI K+RDE RPR G++R REF+MKD Y+ Sbjct: 61 RFLLAPTHEEEITTLVGSLTKSYRDLPVRVYQISRKYRDEARPRQGLLRGREFMMKDLYT 120 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQV 221 FD E + +YN + +Y +F L + + A+SG +GG LSHEF + GE T + Sbjct: 121 FDYNVEEALKTYNLVKAAYKNLFDELKIPYLVAAADSGNMGGSLSHEFHFPSSKGEDTVI 180 Query: 222 FCSK 225 CS+ Sbjct: 181 SCSR 184 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 92/166 (55%), Gaps = 16/166 (9%) Query: 281 GIEVGHIFYFGTKYSLPMSAT------FKGADGKDHYV--QMGSYGIGAMRVVAAVIESS 332 +E+GH F+ GT+YS + A+ G KD V QMG +GIG R+++AV ++ Sbjct: 381 AVELGHTFHLGTRYSEVLQASVMVDQSLSGGAAKDQQVPMQMGCHGIGVSRMISAVADNL 440 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC---DVFWDDMGEQIG 389 D KG+ WP ++AP+++ ++ K EK+Y L+ D DD + +G Sbjct: 441 ADSKGLNWPRAMAPYEVVVVPGKG----LETEAEKVYDLLASKQSSPIDTILDDREKPMG 496 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEV 434 + + ADL+G+P+ ++VG + +E++ RL +RE++ L+++ Sbjct: 497 WKLSDADLIGYPVIIVVGKGWKKQQTLEVQCRRLDNLREEVPLDQL 542 >gi|268567756|ref|XP_002647865.1| Hypothetical protein CBG23664 [Caenorhabditis briggsae] gi|187040879|emb|CAP20462.1| hypothetical protein CBG_23664 [Caenorhabditis briggsae AF16] Length = 265 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 3/166 (1%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +H++++ G I +KG YS LPLGQ+ +D + I+ E +GA+++ +P + + LW Sbjct: 26 AHRMLIENGFILPTAKGFYSLLPLGQRVIDKLCRILDSEFQNSGAMKVGMPIVGTKQLWD 85 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR--SHIKSYRNLPFTFYQIQLKF 139 + R+++ G EML+ DR + PT EE+ TD+ S +K LP YQI KF Sbjct: 86 RTRRWEAMGSEMLKFEDRQKAQLCLQPTAEEMCTDLIAQLSPLKK-SQLPVMLYQIGEKF 144 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 RDE+ PRFG+MR+R+FLMKD YSF L E S+ +Y+ + Y RIF Sbjct: 145 RDEMNPRFGLMRARQFLMKDMYSFALDSESSQKTYHNISNVYDRIF 190 >gi|302497924|ref|XP_003010961.1| hypothetical protein ARB_02859 [Arthroderma benhamiae CBS 112371] gi|291174507|gb|EFE30321.1| hypothetical protein ARB_02859 [Arthroderma benhamiae CBS 112371] Length = 581 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 G+ + G++ LPLG + + + +I + + A ++S+ +L S LW +SGR Sbjct: 19 GIAESKNGGVFHLLPLGLRVQEKLERLIDKHMRKLSASKLSLSSLSSQALWKKSGRLHDD 78 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 E+ R DR + PTHEE +T + IKSYR+LP YQI K+RDE RPR G+ Sbjct: 79 DSEVFRFVDRKKTPFLLAPTHEEEITTVVSGLIKSYRDLPLRVYQISRKYRDEPRPRHGL 138 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R REF+MKD Y+FD T + +YN + +Y+ +F L L + A SG +GG+LSHE Sbjct: 139 LRGREFVMKDLYTFDSTEAEAIKTYNTVKEAYISLFKELKLPYVVASASSGNMGGNLSHE 198 Query: 210 FIVLADTGE-TQVFCSK 225 F + GE T V CSK Sbjct: 199 FHFPSPKGEDTIVSCSK 215 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 95/177 (53%), Gaps = 14/177 (7%) Query: 280 RGIEVGHIFYFGTKYSLPMSA---------TFKGADGKDHYV--QMGSYGIGAMRVVAAV 328 + IE+ H F+ GT+YS + A T G GK V QMG +GIG R+++AV Sbjct: 404 QSIELAHTFHLGTRYSEVLQANISINPAILTGAGQKGKQEPVPIQMGCHGIGVSRMISAV 463 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + D KG+ WP ++APF+++++ K ++ + I + ++ D DD + Sbjct: 464 SDILADEKGLNWPQAIAPFQVAVVPGKGLEKEG-ELVYDIVTQKTQQPIDTILDDRKKDF 522 Query: 389 GSQFAVADLLGFPLQVIVG-SKFVSDSKVEIK-HRLTGIREDMSLEEVINYASHRFS 443 + AD++G+P+ + VG + + + +KVE++ RL +R +SLEEV + S S Sbjct: 523 AWKLRDADIIGYPIILAVGKNSWGAGNKVEVQCRRLGNLRTKVSLEEVPEFVSSLLS 579 >gi|153877657|ref|ZP_02004322.1| Prolyl-tRNA synthetase [Beggiatoa sp. PS] gi|152065879|gb|EDN65678.1| Prolyl-tRNA synthetase [Beggiatoa sp. PS] Length = 183 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 95/167 (56%), Gaps = 1/167 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGHIF G KYS M A GK + MG YGIG R+VAA IE +HD GI Sbjct: 17 ARGIEVGHIFQLGQKYSQAMQANVLDEQGKSVILTMGCYGIGVSRLVAAAIEQNHDEHGI 76 Query: 339 IWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWP S+APF + L+ + H Q R+A E +Y +L G DV +DD E+ G FA ADL Sbjct: 77 IWPQSIAPFSVILLPMSMHKSQRLREAAEAMYNQLQSAGIDVLFDDRRERAGVMFANADL 136 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P ++++G + ++E K R + + E +++ + N Sbjct: 137 IGIPHRLVIGESGLDKGEIEYKGRRDQKAHSIPMAEAVSFIQTQLQN 183 >gi|291533207|emb|CBL06320.1| Prolyl-tRNA synthetase [Megamonas hypermegale ART12/1] Length = 253 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 96/164 (58%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVG +F G KYS + ATF +GK+ + MG YGIG R +AA IE HD GIIW Sbjct: 89 GIEVGQVFKLGIKYSKALGATFLDENGKEKPLIMGCYGIGVSRTMAAAIEQFHDDNGIIW 148 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P S+APF++ ++ I A D+ EK+YA + VG DV DD ++ G +F ADL+G+ Sbjct: 149 PASIAPFEVVIVPINAKDEAQMQIAEKLYADMKNVGIDVLLDDRKDRAGVKFKDADLIGY 208 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 P+++ V K + ++VEIK R G ++ +++ N Sbjct: 209 PVRITVSPKLLDANEVEIKVRRDGATSNVKVDDCAQTVKDMLKN 252 >gi|169836559|ref|ZP_02869747.1| prolyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7a] Length = 289 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 98/171 (57%), Gaps = 3/171 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 Y +D+ + D P+ K V ARG+EVGHIF G KYS + A +GK +Q Sbjct: 100 YDIVADIRTARAGDVSPDGKGVLKIARGMEVGHIFKLGDKYSKALDAKVLDENGKQQVIQ 159 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R+++AVIE HD GIIWP S+AP+ +I D+ + E+IY L Sbjct: 160 MGCYGIGVSRLMSAVIEQKHDDFGIIWPKSIAPYIADVIIANVKDETQVNVAERIYEALK 219 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 DV DD E+ G +F ADL+GFPL+++ G K ++ VE+K R TG Sbjct: 220 NENIDVVLDDRNERAGFKFKDADLIGFPLKIVAG-KGAANGIVEVKDRATG 269 >gi|167947531|ref|ZP_02534605.1| prolyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 110 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 58/110 (52%), Positives = 80/110 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L ++E P DAE ASHKLMLR GMI + + G+Y+WLPLG + L V AI+REE Sbjct: 1 MRTSEFPLQTVKETPADAETASHKLMLRAGMIRKLAAGLYTWLPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTH 110 +R GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+ + +GP H Sbjct: 61 MDRAGALELLMPAVQPAELWQESGRWEQYGPELLRLKDRHQREFCFGPNH 110 >gi|196247599|ref|ZP_03146301.1| Anticodon-binding domain protein [Geobacillus sp. G11MC16] gi|196212383|gb|EDY07140.1| Anticodon-binding domain protein [Geobacillus sp. G11MC16] Length = 298 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 1/157 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F GTKYS M+A + +G+ + MG YGIG R+VAA+ E D G+ Sbjct: 134 ARGIEVGHVFKLGTKYSEAMNAVYLDENGRTQTMIMGCYGIGVSRLVAAIAEQFADENGL 193 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +WP SVAPF + L+ A R E+ Y +L + G DV +DD E+ G +FA +DL+ Sbjct: 194 VWPVSVAPFHVHLLTANAKSDEQRMLAEEWYEKLGQAGFDVLYDDRPERAGVKFADSDLI 253 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G PL+V VG K S+ VE+K R TG D+ + E+I Sbjct: 254 GIPLRVTVG-KRASEGVVEVKVRKTGETFDVPVGELI 289 >gi|34763883|ref|ZP_00144787.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886346|gb|EAA23617.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 411 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/158 (43%), Positives = 94/158 (59%), Gaps = 1/158 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 SARGIE G IF G KYS M+AT+ +GK Y+ MG YGIG R +AA IE ++D G Sbjct: 245 SARGIECGQIFKLGDKYSKAMNATYLDENGKTQYMLMGCYGIGVTRTMAAAIEQNNDENG 304 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP S+AP+ + +I ++V EKIY L + D DD E+ G +F ADL Sbjct: 305 IIWPVSIAPYTVDVIPANIKNEVQVSLAEKIYNELEEEKIDAMLDDRDEKPGFKFKDADL 364 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +GFP +++VG K + VE+K R TG ++ E+I Sbjct: 365 IGFPFKIVVG-KRADEGIVELKIRRTGETLELPQNEII 401 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/68 (48%), Positives = 42/68 (61%) Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 MKDAYSF + E + M +Y RIF R GLK P+ A+SG IGG S EF VLA++ Sbjct: 1 MKDAYSFHTSQESLDEEFLNMRNAYSRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAES 60 Query: 217 GETQVFCS 224 GE ++ S Sbjct: 61 GEDEIIYS 68 >gi|239608018|gb|EEQ85005.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis ER-3] Length = 555 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 80/231 (34%), Positives = 125/231 (54%), Gaps = 19/231 (8%) Query: 43 LPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK 102 LPLG + + + ++ + GA ++S+ ++ S LW +SGR E + DR + Sbjct: 2 LPLGLRVQEKLERLVDKHMRTLGASKLSLSSISSQALWEKSGRLKK-DSEFFKFQDRKEA 60 Query: 103 AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 + PTHEE +T + + SYR+LP YQI K+RDE RPR G++R REF+MKD Y+ Sbjct: 61 RFLLAPTHEEEITSLVAGAVNSYRDLPLRVYQISRKYRDEPRPRQGLLRGREFIMKDLYT 120 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQV 221 FD +PE + +Y+ + +Y+R+F L + + A+SG +GG LSHEF + GE T + Sbjct: 121 FDYSPETAIKTYSAVKKAYIRLFDELRIPYMIATADSGNMGGSLSHEFHLPNPKGEDTII 180 Query: 222 FCS-------------KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 CS K + D P N + D L++ +E+ AP +T Sbjct: 181 SCSSCGNVYNEELSDGKAYEDL-TPPANPNLD---KLSAGLEEQQAPAIST 227 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 98/171 (57%), Gaps = 21/171 (12%) Query: 281 GIEVGHIFYFGTKYS--------LPMSATFKGADGKDHY-----VQMGSYGIGAMRVVAA 327 IE+ H F+ GT+YS +P++ G+ D ++MG +GIG R+++A Sbjct: 378 AIELAHTFHLGTRYSKVLNASVAVPLTLLKDGSKTDDTSTLSVPLEMGCHGIGVSRMISA 437 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS--KVGC-DVFWDDM 384 V ++ D KG+ WP ++APF++ +I D+ E++Y ++ ++G DV DD Sbjct: 438 VADTLADSKGLNWPRAIAPFEVIIIP----DKGLEGEAERVYDDINGRQIGAVDVIVDDR 493 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEV 434 I + ADL+G+P+ +++G + +++K+E++ RL +RE +SL+++ Sbjct: 494 DRNIPWKLRDADLIGYPVIIVIGKSWKTENKLEVQCRRLNNLRETVSLQDL 544 >gi|261200038|ref|XP_002626420.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239594628|gb|EEQ77209.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] Length = 555 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 80/231 (34%), Positives = 125/231 (54%), Gaps = 19/231 (8%) Query: 43 LPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK 102 LPLG + + + ++ + GA ++S+ ++ S LW +SGR E + DR + Sbjct: 2 LPLGLRVQEKLERLVDKHMRTLGASKLSLSSISSQALWEKSGRLKK-DSEFFKFQDRKEA 60 Query: 103 AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 + PTHEE +T + + SYR+LP YQI K+RDE RPR G++R REF+MKD Y+ Sbjct: 61 RFLLAPTHEEEITSLVAGAVNSYRDLPLRVYQISRKYRDEPRPRQGLLRGREFIMKDLYT 120 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQV 221 FD +PE + +Y+ + +Y+R+F L + + A+SG +GG LSHEF + GE T + Sbjct: 121 FDYSPETAIKTYSAVKKAYIRLFDELRIPYMIATADSGNMGGSLSHEFHLPNPKGEDTII 180 Query: 222 FCS-------------KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 CS K + D P N + D L++ +E+ AP +T Sbjct: 181 SCSSCGNVYNEELSDGKAYEDL-TPPANPNLD---KLSAGLEEQQAPAIST 227 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 97/171 (56%), Gaps = 21/171 (12%) Query: 281 GIEVGHIFYFGTKYS--------LPMSATFKGADGKDHY-----VQMGSYGIGAMRVVAA 327 IE+ H F+ GT+YS +P++ G+ D ++MG +GIG R+++A Sbjct: 378 AIELAHTFHLGTRYSKVLNASVAVPLTLLKDGSKTDDTSTLSVPLEMGCHGIGVSRMISA 437 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS--KVGC-DVFWDDM 384 V ++ D KG+ WP ++APF++ +I D+ E++Y ++ ++G D DD Sbjct: 438 VADTLADSKGLNWPRAIAPFEVIIIP----DKGLEGEAERVYDDINGRQIGAVDAIVDDR 493 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEV 434 I + ADL+G+P+ +++G + +++K+E++ RL +RE +SL+++ Sbjct: 494 DRNIPWKLRDADLIGYPVIIVIGKSWKTENKLEVQCRRLNNLRETVSLQDL 544 >gi|115906275|ref|XP_001189525.1| PREDICTED: similar to Prolyl-tRNA synthetase (mitochondrial)(putative), partial [Strongylocentrotus purpuratus] Length = 149 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 90/144 (62%), Gaps = 1/144 (0%) Query: 48 KALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG 107 +AL+ + +I E + G ++++P + + LW SGRY YG E++ L DR++ G Sbjct: 2 RALEKLIKVIDTEMQKVGGQKIAMPGMTPSSLWKTSGRYSDYGPELITLQDRHNVDYCLG 61 Query: 108 PTHEEVMTDIFRSH-IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLT 166 PTHEE +TDI S++ LP YQI KFRDE+RPR+G++R REFLMKD Y+FD Sbjct: 62 PTHEEAVTDIVAGEKTLSHKRLPIKLYQITNKFRDEMRPRYGLLRGREFLMKDLYTFDSN 121 Query: 167 PEGSKHSYNKMFVSYLRIFHRLGL 190 EG++ +Y + +Y RIF L L Sbjct: 122 LEGAEETYRSVCEAYQRIFSILDL 145 >gi|115969223|ref|XP_001192584.1| PREDICTED: similar to Prolyl-tRNA synthetase (mitochondrial)(putative), partial [Strongylocentrotus purpuratus] Length = 185 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 90/144 (62%), Gaps = 1/144 (0%) Query: 48 KALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG 107 +AL+ + +I E + G ++++P + + LW SGRY YG E++ L DR++ G Sbjct: 2 RALEKLIKVIDTEMQKVGGQKIAMPGMTPSSLWKTSGRYSDYGPELITLQDRHNVDYCLG 61 Query: 108 PTHEEVMTDIFRSH-IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLT 166 PTHEE +TDI S++ LP YQI KFRDE+RPR+G++R REFLMKD Y+FD Sbjct: 62 PTHEEAVTDIVAGEKTLSHKRLPIKLYQITNKFRDEMRPRYGLLRGREFLMKDLYTFDSN 121 Query: 167 PEGSKHSYNKMFVSYLRIFHRLGL 190 EG++ +Y + +Y RIF L L Sbjct: 122 LEGAEETYRSVCEAYQRIFSILDL 145 >gi|323348900|gb|EGA83137.1| YER087W-like protein [Saccharomyces cerevisiae Lalvin QA23] Length = 484 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 100/161 (62%), Gaps = 2/161 (1%) Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 GAIE+S+ + S LW + R+++ E+ +L D K T EE +TD+ +++I S Sbjct: 6 GAIEVSLSAISSKALWQATDRWNN--SELFKLKDSKGKQYCLTATCEEDITDLMKNYIAS 63 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 Y+++P T YQ+ K+RDE+RPR G++R REFLMKDAYSF E + S+ K+ +Y +I Sbjct: 64 YKDMPITIYQMTRKYRDEIRPRGGILRGREFLMKDAYSFASNEEDAFASFQKLDDTYNKI 123 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 F L + + A+SG IGG+ S EF ++ ++GE + K Sbjct: 124 FKDLKIPFVSAWADSGDIGGEFSKEFHLIHESGEDTLMSCK 164 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%) Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH-YVQMGSYGI 319 D ++ E + + IEVGHIF G KYS P++ F + K+ +V MG YGI Sbjct: 291 DAQENEICGKCEEGRLEPLKSIEVGHIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGI 350 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI---NIKAHDQVCRDACEKIY-----AR 371 G R+V A+ E D G WP +AP+K+S+ N + Q +D K+ Sbjct: 351 GVSRLVGAIAELGRDSNGFRWPAIMAPYKVSICTGPNNPENSQRLQDVKSKLLNDPTMQN 410 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 L D F + +G IG++ ++ +G PL VIVGSK + ++EI+ GIR Sbjct: 411 LQNDILDQFNEKLG--IGARIKLSHAMGIPLCVIVGSKSWPNVEIEIR----GIR 459 >gi|323337977|gb|EGA79216.1| YER087W-like protein [Saccharomyces cerevisiae Vin13] gi|323355284|gb|EGA87109.1| YER087W-like protein [Saccharomyces cerevisiae VL3] Length = 509 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 101/166 (60%), Gaps = 2/166 (1%) Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 GAIE+S+ + S LW + R+++ E+ +L D K T EE +TD+ +++I S Sbjct: 6 GAIEVSLSAISSKALWQATDRWNN--SELFKLKDSKGKQYCLTATCEEDITDLMKNYIAS 63 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 Y+++P T YQ+ K+RDE+RPR G++R REFLMKDAYSF E + S+ K+ +Y +I Sbjct: 64 YKDMPITIYQMTRKYRDEIRPRGGILRGREFLMKDAYSFASNEEDAFASFQKLDDTYNKI 123 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 F L + + A+SG IGG+ S EF ++ ++GE + K D Sbjct: 124 FKDLKIPFVSAWADSGDIGGEFSKEFHLIHESGEDTLMSCKHCGDI 169 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%) Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH-YVQMGSYGI 319 D ++ E + + IEVGHIF G KYS P++ F + K+ +V MG YGI Sbjct: 291 DAQENEICGKCEEGRLEPLKSIEVGHIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGI 350 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI---NIKAHDQVCRDACEKIY-----AR 371 G R+V A+ E D G WP +AP+K+S+ N + Q +D K+ Sbjct: 351 GVSRLVGAIAELGRDSNGFRWPAIMAPYKVSICTGPNNPENSQRLQDVKSKLLNDPTMQN 410 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 L D F + +G IG++ ++ +G PL VIVGSK + ++EI+ GIR Sbjct: 411 LQNDILDQFNEKLG--IGARIKLSHAMGIPLCVIVGSKSWPNVEIEIR----GIR 459 >gi|323305259|gb|EGA59006.1| YER087W-like protein [Saccharomyces cerevisiae FostersB] Length = 509 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 101/166 (60%), Gaps = 2/166 (1%) Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 GAIE+S+ + S LW + R+++ E+ +L D K T EE +TD+ +++I S Sbjct: 6 GAIEVSLSAISSKALWQATDRWNN--SELFKLKDSKGKQYCLTATCEEDITDLMKNYIAS 63 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 Y+++P T YQ+ K+RDE+RPR G++R REFLMKDAYSF E + S+ K+ +Y +I Sbjct: 64 YKDMPITIYQMTRKYRDEIRPRGGILRGREFLMKDAYSFASNEEDAFASFQKLDDTYNKI 123 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 F L + + A+SG IGG+ S EF ++ ++GE + K D Sbjct: 124 FKDLKIPFVSAWADSGDIGGEFSKEFHLIHESGEDTLMSCKHCGDI 169 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%) Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH-YVQMGSYGI 319 D ++ E + + IEVGHIF G KYS P++ F + K+ +V MG YGI Sbjct: 291 DAQENEICGKCEEGRLEPLKSIEVGHIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGI 350 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI---NIKAHDQVCRDACEKIY-----AR 371 G R+V A+ E D G WP +AP+K+S+ N + Q +D K+ Sbjct: 351 GVSRLVGAIAELGRDSNGFRWPAIMAPYKVSICTGPNNPENSQRLQDVKSKLLNDPTMQN 410 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 L D F + +G IG++ ++ +G PL VIVGSK + ++EI+ GIR Sbjct: 411 LQNDILDQFNEKLG--IGARIKLSHAMGIPLCVIVGSKSWPNVEIEIR----GIR 459 >gi|322697644|gb|EFY89422.1| prolyl-tRNA synthetase [Metarhizium acridum CQMa 102] Length = 506 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/160 (40%), Positives = 95/160 (59%), Gaps = 2/160 (1%) Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKE--MLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA +S+ T+ S +LW SGR D E + RL DR ++ PTHEE +T + S + Sbjct: 5 GASRLSLSTITSEELWRRSGRLDRVSSEAQLFRLTDRKQVPIMLSPTHEEEITTLVASAL 64 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 KS+++LP YQ K+RDE+RPR G++RSREF+MKD Y+FD + E + +Y + +Y Sbjct: 65 KSFKDLPLRLYQTTRKYRDEMRPRHGLLRSREFIMKDLYTFDTSFESAIDTYKCVSRAYR 124 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 F + + + A SG +GGD SHE+ + GE +V Sbjct: 125 AFFAEMRIPILVAEASSGDMGGDYSHEYHLAHPIGEDRVI 164 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 4/158 (2%) Query: 280 RGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 R +E+GH FY G++YS P +S TF + V+MG YGIG R+ AV E D +G Sbjct: 339 RALELGHTFYLGSRYSKPFELSVTFPNSKAPVP-VEMGCYGIGVSRIFGAVAEHKADERG 397 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYA-RLSKVGCDVFWDDMGEQIGSQFAVAD 396 + WP ++APF+I +I + + +K+ + S G D DD E G + AD Sbjct: 398 LNWPRAIAPFEIVVIPTSGVNSQTLEFHDKLTSWSSSGPGFDAVLDDRKETFGWKMQDAD 457 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G+P+ +++G + E++ R +E++++E++ Sbjct: 458 MTGYPVTIVLGKAWRERGVCEVQCRSLSSKENIAVEDL 495 >gi|311893995|dbj|BAJ26403.1| putative prolyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 556 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 112/222 (50%), Gaps = 3/222 (1%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQN 62 + P + D + L+ G++ + + G+++ LPLG + D ++ I R+ Sbjct: 10 ASRLFPTPRPRATDPTAPTKDLLEHLGLVGRTDTTGVHTLLPLGLRVRDQLDRITRDAFE 69 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSH 121 R G +++PTLQS LW ESGR+ Y E + R A M PT EE+ T RSH Sbjct: 70 RNGFNSLALPTLQSRTLWEESGRWKVYTAEGALVTTRVGGADMCLAPTSEEMATATVRSH 129 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++S+R+LP KFRDEL PR G+MR REF M DAY+FD G S + + Sbjct: 130 LRSHRDLPVRLTLNTTKFRDELSPRGGLMRGREFTMADAYTFDPDRAGMLESVRLLNRAC 189 Query: 182 LRIFHRLGLKSI-PMRAESGPIGGDLSHEFIVLADTGETQVF 222 +GL + A+ G I + E +VLAD G++ + Sbjct: 190 TDALTGIGLHGVFQAPADGGAISAGPTTEHLVLADFGQSSIL 231 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 1/153 (0%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 +EV H+F GT+YS M TF +G MG GIG R + + D G+ W Sbjct: 397 VEVAHVFELGTQYSGKMHLTFTDDNGIQRTPYMGCSGIGLTRCIQTLAGIHRDANGLRWK 456 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 P + L+ +++ ++ ++ RL ++G + DD G +F A LG P Sbjct: 457 PGTGPADVHLVVLRSDQAEQQERTDRTARRLQQLGLRLLIDDRPLPAGEKFHYAQALGVP 516 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +++ S +D ++E R TG R ++ +++ Sbjct: 517 TALVL-SPQRADGELEAIDRWTGRRSTITSDQL 548 >gi|225560003|gb|EEH08285.1| prolyl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 555 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/183 (38%), Positives = 106/183 (57%), Gaps = 2/183 (1%) Query: 43 LPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK 102 LPLG + + + ++ + GA ++S+ ++ S LW +SGR E + DR Sbjct: 2 LPLGLRVQEKLERLVDKHMRTLGASKLSLSSISSQALWEKSGRLKK-DSEFFKFQDRKKA 60 Query: 103 AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 + PTHEE +T + + SY++LP YQI K+RDE RPR G++R REF+MKD Y+ Sbjct: 61 RFLLAPTHEEEITSLVAGVMNSYKDLPLRVYQISRKYRDEPRPRQGLLRGREFIMKDLYT 120 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQV 221 FD E + +YN + +Y+R+F L + I A+SG +GG+LSHEF + GE T + Sbjct: 121 FDYNAEMAIKTYNAVKDTYVRLFDELRIPYIIATADSGNMGGNLSHEFHLPNPKGEDTII 180 Query: 222 FCS 224 CS Sbjct: 181 SCS 183 Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 96/171 (56%), Gaps = 21/171 (12%) Query: 281 GIEVGHIFYFGTKYSLPMSA------TFKGADGKDH-------YVQMGSYGIGAMRVVAA 327 IE+ H F+ GT+YS ++A T D K + +QMG +GIG R+++A Sbjct: 378 AIELAHTFHLGTRYSKVLNASVAVPSTLLSNDSKANDNSSVSVPLQMGCHGIGVSRMISA 437 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV---GCDVFWDDM 384 + +S + KG+ WP ++APF+ +I D+ + EK+Y +S++ D DD Sbjct: 438 IADSLANSKGLNWPRAIAPFEAMII----PDKGLEEEAEKVYDAISRINIDAVDAIIDDR 493 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEV 434 + + + ADL+G+P+ ++VG + ++K+E++ HRL +RE +SL ++ Sbjct: 494 DKNLAWKLRDADLIGYPVIIVVGKSWRMENKLEVQCHRLNNLRETVSLPDL 544 >gi|115491451|ref|XP_001210353.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114197213|gb|EAU38913.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 564 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 107/201 (53%), Gaps = 26/201 (12%) Query: 25 LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESG 84 L++R G + Q GI+ LPLG + D + +I + ++M V Sbjct: 29 LLIRGGFLRQAYSGIFHMLPLGLRVQDKLERLIDKHMR---LLDMQV------------- 72 Query: 85 RYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 R DR + + PTHEE +T + S KSYR+LP YQI K+RDE R Sbjct: 73 ---------FRFLDRKESRFLLAPTHEEEITTLVGSLTKSYRDLPLRVYQISRKYRDEPR 123 Query: 145 PRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGG 204 PR G++R REF+MKD Y+FD + E + +Y ++ +Y R+F+ L + + A+SG +GG Sbjct: 124 PRQGLLRGREFIMKDLYTFDYSMEEALKTYGQVRAAYTRLFNELKIPYLVAVADSGNMGG 183 Query: 205 DLSHEFIVLADTGE-TQVFCS 224 +LSHEF + GE T + C+ Sbjct: 184 NLSHEFHFPSSKGEDTVITCT 204 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 15/170 (8%) Query: 281 GIEVGHIFYFGTKYSLPMSATF---KGADGK--DHYV--QMGSYGIGAMRVVAAVIESSH 333 IE+GH F+ GT+YS + A + GK D V +MG +GIG R++ AV +S Sbjct: 393 AIELGHTFHLGTRYSEVLQACVMVDRATAGKSEDQTVPMEMGCHGIGVSRMITAVADSLA 452 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC---DVFWDDMGEQIGS 390 D KG+ WP ++AP+++ ++ K + DA EKIY L+ D DD +Q+G Sbjct: 453 DSKGLNWPRAMAPYEVIVVPTKGLEA---DA-EKIYDVLASNPTSPFDTILDDRDKQMGW 508 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEVINYAS 439 + ADL+G+P+ V+VG + VE++ RL +RE++ LE + + + Sbjct: 509 KLGDADLIGYPVIVVVGKGWKKQQTVEVQCRRLNNLRENVPLERLPEFVN 558 >gi|240276126|gb|EER39638.1| prolyl-tRNA synthetase [Ajellomyces capsulatus H143] gi|325090008|gb|EGC43318.1| prolyl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 555 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 2/183 (1%) Query: 43 LPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK 102 LPLG + + + ++ + GA ++S+ ++ S LW +SGR E + DR Sbjct: 2 LPLGLRVQEKLERLVDKHMRTLGASKLSLSSISSQALWEKSGRLKK-DSEFFKFQDRKKA 60 Query: 103 AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 + PTHEE +T + + SY++LP YQI K+RDE RPR G++R REF+MKD Y+ Sbjct: 61 RFLLAPTHEEEITSLVAGVMNSYKDLPLRVYQISRKYRDEPRPRQGLLRGREFIMKDLYT 120 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQV 221 FD E + +YN + +Y+R+F L + I A+SG +GG LSHEF + GE T + Sbjct: 121 FDYNAEMAIKTYNAVKDTYVRLFDELRIPYIIATADSGNMGGSLSHEFHLPNPKGEDTII 180 Query: 222 FCS 224 CS Sbjct: 181 SCS 183 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 96/171 (56%), Gaps = 21/171 (12%) Query: 281 GIEVGHIFYFGTKYSLPMSA------TFKGADGKDH-------YVQMGSYGIGAMRVVAA 327 IE+ H F+ GT+YS ++A T D K + +QMG +GIG R+++A Sbjct: 378 AIELAHTFHLGTRYSKVLNASVAVPSTLLSNDSKANDNSSVSVPLQMGCHGIGVSRMISA 437 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV---GCDVFWDDM 384 + +S + KG+ WP ++APF+ +I D+ + EK+Y +S++ D DD Sbjct: 438 IADSLANSKGLNWPRAIAPFEAMIIP----DKGLEEEAEKVYDAISRINIDAVDAIIDDR 493 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEV 434 + + + ADL+G+P+ ++VG + +SK+E++ HRL +RE +SL ++ Sbjct: 494 DKNLAWKLRDADLIGYPVIIVVGKSWRMESKLEVQCHRLNNLRETVSLPDL 544 >gi|84995882|ref|XP_952663.1| prolyl-t-RNA synthase [Theileria annulata strain Ankara] gi|65302824|emb|CAI74931.1| prolyl-t-RNA synthase, putative [Theileria annulata] Length = 460 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 98/387 (25%), Positives = 165/387 (42%), Gaps = 70/387 (18%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG-KEML 94 S GIY+ LPLG + ++ ++ I E + GA+++S P L ++ +G ++ G E+ Sbjct: 76 SSGIYTTLPLGHRIINRISNIFNVELYKLGAVQLSFPLLNPDNVVSNTG--NTVGDSELF 133 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIK--SYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 +++ T E++ + ++ + S LP YQI KFRDELR G +R Sbjct: 134 KVSRNGSLEYRLSGTCEDLCNVVLKNELTPLSKLQLPVLLYQINTKFRDELRVNEGKVRL 193 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 REFLM D YS + + S +Y+ + ++ I LGL+ + I SHE V Sbjct: 194 REFLMLDLYSLHSSEQCSDSTYSLVLECFVNILRLLGLQFTTLNCNRNNI---FSHELRV 250 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 + Q + NT+ + Sbjct: 251 QHSNNQDQ-------------NSNTELE-------------------------------- 265 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 VGH+F FGT+YS ++ + + + M SYGIG R++ +I + Sbjct: 266 -----------VGHLFKFGTRYSDTYGLEYEVSGRRREKLYMNSYGIGINRLLNVLINNY 314 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D GI P VAP+ I++I D +D + I L K G V +DD + I ++ Sbjct: 315 SDEFGIKLPQLVAPYDITII-----DSTTKDGWQ-ISRGLMKKGLTVLYDDRNDTIKNKL 368 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +G P +I+G+ +++ K Sbjct: 369 LDSKRIGIPHILILGNSLNGKNRLNKK 395 >gi|255026350|ref|ZP_05298336.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-003] Length = 237 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 72 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 131 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L G V DD E+ G +FA AD Sbjct: 132 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYTSLQDAGFSVLIDDRAERAGVKFADAD 189 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 190 LIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLN 228 >gi|255017946|ref|ZP_05290072.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL F2-515] Length = 248 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 83 AEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 142 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L G V DD E+ G +FA AD Sbjct: 143 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYTSLQDAGFSVLIDDRAERAGVKFADAD 200 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 201 LIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLN 239 >gi|255527265|ref|ZP_05394146.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|255509050|gb|EET85409.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 556 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 25/281 (8%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK L L+E P + E+ S+KLM+R G+I + + GIY+++P G+K + NVN +I+ E Sbjct: 1 MKLSKMILGTLREAPGETELESYKLMVRAGIIRKVASGIYNFMPTGKKVIGNVNNLIKNE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ V +L + +S + D+++K G +E +I ++ Sbjct: 61 MEKIDSQEIEVSQFVPFELLNQCNNKESSLTDTFETVDKSEKKFYVGADFKEPYIEIVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF--DLTPEGSKHSYNKMF 178 IKSY+ LP + Y IQ + +DE +P+FG+++S+EF Y F DLT S N + Sbjct: 121 EIKSYKQLPVSIYSIQKQIKDEPKPKFGIIKSKEFNELQCYVFHDDLTE--SSQYINSLC 178 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF---MDFPIPS- 234 + I+H+ + SI S F + GE V C + D I + Sbjct: 179 EVFNSIYHKCRIDSIKTN----------SLRFFIKHPLGEEHVVCCESCGYKEDLEIATC 228 Query: 235 --ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + DD+ +N I + P T D LF++ PE Sbjct: 229 TLQTEEEDDMKPMNKI----STPDTRTID-ELASLFNTTPE 264 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 1/138 (0%) Query: 284 VGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDS 343 +G I T YS M+A F GK + + + I R++A ++E +HD GI+WP S Sbjct: 396 LGQIMNLKTTYSENMNAVFLDKLGKSKPMSIINASINIDRLLALIVEQNHDKNGIVWPKS 455 Query: 344 VAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ 403 VAP+++ +I ++ E IY +L +G DV DD E+ G +F ADL+G P++ Sbjct: 456 VAPYEVIVIAAVFKNEEQMKTAENIYNKLKSLGIDVLLDDRDERAGVKFKDADLIGAPIR 515 Query: 404 VIVGSKFVSDSKVEIKHR 421 + VG K +SD KVE K R Sbjct: 516 ITVG-KRISDGKVEFKLR 532 >gi|295667908|ref|XP_002794503.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] gi|226285919|gb|EEH41485.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] Length = 589 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 83/132 (62%), Gaps = 1/132 (0%) Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 +R DR + + PTHEE +T + S + SYR+LP YQ K+RDE RPR G++R R Sbjct: 79 MRTLDRKEARFLLAPTHEEEITSLVESSVSSYRDLPLRLYQFGRKYRDEPRPRQGLLRGR 138 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 EF+MKD Y+FD + E + +YN + +Y+R+F+ L L I A+SG +GG LSHEF + Sbjct: 139 EFMMKDLYTFDYSAEKAIETYNAVKEAYIRLFNELKLPYIVAAADSGNMGGSLSHEFHLP 198 Query: 214 ADTGE-TQVFCS 224 GE T V CS Sbjct: 199 NSKGEDTIVSCS 210 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 27/189 (14%) Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSAT-------FKGADGKDHY------------VQ 313 EN + IE+ H F+ GT+YS ++A+ +G+ + ++ Sbjct: 398 ENSVETHTAIELAHTFHLGTRYSEVLNASVAIPSSILRGSLTTERTALAQSSRTVSVPLE 457 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL- 372 MG +GIG R++AAV ++ D KG+ WP ++PF + +I+ D+ E++Y L Sbjct: 458 MGCHGIGVSRMIAAVADTLADPKGLNWPRVISPFDVIIIS----DRELEKEAEQVYDTLM 513 Query: 373 --SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDM 429 K D DD + + + ADL+G+P+ +++G + D+K+EI+ RL RE + Sbjct: 514 ESQKADVDAIIDDREKSLTWKLRDADLIGYPVIIVIGKSWKRDNKLEIQCRRLENFRETV 573 Query: 430 SLEEVINYA 438 SL+++ Y Sbjct: 574 SLQDLRFYT 582 >gi|240144896|ref|ZP_04743497.1| proline--tRNA ligase [Roseburia intestinalis L1-82] gi|257203029|gb|EEV01314.1| proline--tRNA ligase [Roseburia intestinalis L1-82] Length = 330 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 60/155 (38%), Positives = 92/155 (59%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +RGIEVG+IF G KY+ M T+ +G+ MG YGIG R+ AAV E+ HD G Sbjct: 167 SRGIEVGNIFQLGDKYTKAMKMTYVDQNGESKTPIMGCYGIGVGRLAAAVCEAHHDEYGP 226 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP S+AP+++ L ++A ++ R + +Y +L ++G +V +DD G F+ ADLL Sbjct: 227 IWPKSIAPWQVHLCAVRADNEEVRKFADDLYEKLQEMGIEVIYDDRTVSAGVMFSDADLL 286 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G PL+VIV + + VE+ R ++ + +EE Sbjct: 287 GIPLRVIVSPRNMKQGVVEVASRDKTLQTQVKMEE 321 >gi|315282168|ref|ZP_07870635.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313614185|gb|EFR87862.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 252 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 65/160 (40%), Positives = 96/160 (60%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF TKYS M+AT +G+ + MG YGIG R+++A+ E S+D G Sbjct: 87 AEGIEVGHIFKLRTKYSQAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGF 146 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L G V DD E+ G +FA AD Sbjct: 147 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYTSLQGAGFSVLIDDRAERAGVKFADAD 204 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 205 LIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLN 243 >gi|296187244|ref|ZP_06855640.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296048115|gb|EFG87553.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 556 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 25/281 (8%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK L L+E P + E+ S+KLM+R G+I + + GIY+++P +K + NVN +I+ E Sbjct: 1 MKLSKMILGTLREAPGETELESYKLMVRAGIIRKVASGIYNFMPTRKKVIGNVNNLIKNE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ V +L + +S + D+++K G +E +I ++ Sbjct: 61 MEKIDSQEIEVSQFVPFELLNQCNNKESSLTDTFETVDKSEKKFYVGADFKEPYIEIVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF--DLTPEGSKHSYNKMF 178 IKSY+ LP + Y IQ + +DE +P+FG+++S+EF Y F DLT S N + Sbjct: 121 EIKSYKQLPVSIYSIQKQIKDEPKPKFGIIKSKEFNELQCYVFHDDLTE--SSQYINSLC 178 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF---MDFPIPS- 234 + I+H+ + SI S F + GE V C + D I + Sbjct: 179 EVFNSIYHKCRIDSIKTN----------SLRFFIKHPLGEEHVVCCESCGYKEDLEIATC 228 Query: 235 --ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + DD+ +N I + P T D LF++ PE Sbjct: 229 TLQTEEEDDMKPMNKI----STPDTRTID-ELASLFNTTPE 264 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 1/138 (0%) Query: 284 VGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDS 343 +G I T YS M+A F GK + + + I R++A ++E +HD GI+WP S Sbjct: 396 LGQIMNLKTTYSENMNAVFLDKLGKSKPMSIINASINIDRLLALIVEQNHDKNGIVWPKS 455 Query: 344 VAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ 403 VAP+++ +I ++ E IY +L +G DV DD E+ G +F ADL+G P++ Sbjct: 456 VAPYEVIVIAAVFKNEEQMKTAENIYNKLKSLGIDVLLDDRDERAGVKFKDADLIGAPIR 515 Query: 404 VIVGSKFVSDSKVEIKHR 421 + VG K +SD KVE K R Sbjct: 516 ITVG-KRISDGKVEFKLR 532 >gi|330878004|gb|EGH12153.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 162 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/155 (37%), Positives = 94/155 (60%), Gaps = 2/155 (1%) Query: 285 GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 GHI+ GTKYS M G +GK + MG YGIG RVVAA IE + D GIIW D++ Sbjct: 1 GHIWQLGTKYSEAMKCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTL 60 Query: 345 APFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI--GSQFAVADLLGFPL 402 APF+I+LI ++ R+A +K+YA L+ G +V DD ++ G +FA +L+G P Sbjct: 61 APFQIALIPLRYETDAVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPH 120 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +++V + +++ +E K R + +++ +V+++ Sbjct: 121 RIVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSF 155 >gi|315928700|gb|EFV07980.1| Proline-tRNA ligase [Campylobacter jejuni subsp. jejuni 305] Length = 347 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 94/158 (59%), Gaps = 1/158 (0%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 ++GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG Sbjct: 183 QSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKG 242 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IW ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L Sbjct: 243 CIWNKTLAPFVLEIIVSNLKDEKALEFANKLYRDLTNLGLEVLLDDRNERFGVKMNDFEL 302 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +GFP +++G K + ++++E+ R ++E + +E++ Sbjct: 303 MGFPYALVIG-KGLENNEIELIQREGLVKELIKTDELM 339 >gi|154287788|ref|XP_001544689.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150408330|gb|EDN03871.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 523 Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 1/132 (0%) Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 +R DR + PTHEE +T + + SY++LP YQI K+RDE RPR G++R R Sbjct: 20 MRTLDRKKARFLLAPTHEEEITSLVAGVMNSYKDLPLRVYQISRKYRDEPRPRQGLLRGR 79 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 EF+MKD Y+FD E + +YN + +Y+R+F L + I A+SG +GG LSHEF + Sbjct: 80 EFIMKDLYTFDYNAEMAIKTYNAVKETYVRLFDELRIPYIIATADSGNMGGSLSHEFHLP 139 Query: 214 ADTGE-TQVFCS 224 GE T + CS Sbjct: 140 NPKGEDTIISCS 151 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 95/171 (55%), Gaps = 21/171 (12%) Query: 281 GIEVGHIFYFGTKYSLPMSATF-----------KGADGKDHYV--QMGSYGIGAMRVVAA 327 IE+ H F+ GT+YS ++A+ K D V QMG +GIG R+++A Sbjct: 346 AIELAHTFHLGTRYSKVLNASVAVPSTLLSNDSKANDNSTFSVPLQMGCHGIGVSRMISA 405 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV---GCDVFWDDM 384 + +S + KG+ WP ++APF+ +I D+ + EK+Y +S++ D DD Sbjct: 406 IADSLANSKGLNWPRAIAPFEAMII----PDKGLEEEAEKVYDAISRINIDAVDAIIDDR 461 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEV 434 + + + ADL+G+P+ ++VG + ++K+E++ HRL +RE +SL ++ Sbjct: 462 DKNLAWKLRDADLIGYPVIIVVGKSWRMENKLEVQCHRLNNLRETVSLPDL 512 >gi|225166272|ref|ZP_03727969.1| prolyl-tRNA synthetase [Opitutaceae bacterium TAV2] gi|224799485|gb|EEG18017.1| prolyl-tRNA synthetase [Opitutaceae bacterium TAV2] Length = 296 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/142 (42%), Positives = 82/142 (57%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RGIEVGHIF GTKYS +A + + H + MG YGIG R + A+IE HD GII Sbjct: 117 RGIEVGHIFKLGTKYSEKFNALYTDDQKQQHPMVMGCYGIGISRTLQAIIEQCHDADGII 176 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP + APF++ + + D EK+ A + G DV DD E+ G +F ADL+G Sbjct: 177 WPWACAPFQVLVTVLDPQDATVAALAEKLAAAAERAGADVLLDDRTERPGVKFKDADLIG 236 Query: 400 FPLQVIVGSKFVSDSKVEIKHR 421 PL++ VG K + D +E+K R Sbjct: 237 IPLRITVGGKGIKDGIIELKWR 258 >gi|289758965|ref|ZP_06518343.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T85] gi|289714529|gb|EFD78541.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T85] Length = 513 Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 86/148 (58%), Gaps = 2/148 (1%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 V ARGIE+GHIF G+KY+ +A G DGK + MGSYGIG R+VA V E HD Sbjct: 347 VMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDEL 406 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G+ WP +VAPF + L+ I D R + A L ++G +V DD G +F A+ Sbjct: 407 GLRWPSTVAPFDVHLV-IANKDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAE 465 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 LLG P V+VG + +D VE++ R +G Sbjct: 466 LLGMPWIVVVGRGW-ADGVVELRDRFSG 492 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/112 (45%), Positives = 72/112 (64%), Gaps = 1/112 (0%) Query: 107 GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLT 166 GPT V T + SY++ P T YQIQ K+RDE RPR G++R+REF+MKD+YSFD+ Sbjct: 41 GPTTRAV-TLTVKGEYSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDID 99 Query: 167 PEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 G K +Y+ +Y RIF RL ++ + + A SG +GG S EF+ + +GE Sbjct: 100 AAGLKAAYHAHREAYQRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGE 151 >gi|255024838|ref|ZP_05296824.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-208] Length = 170 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 75/127 (59%), Gaps = 4/127 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIEVGHIF GTKYS M+AT +G+ + MG YGIG +++ + E S+D G Sbjct: 46 AEGIEVGHIFKLGTKYSQAMNATILDENGRAQPIIMGCYGIGVSXILSTIAEQSNDENGF 105 Query: 339 IWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +W ++PF + LI N+K+ +QV E +Y L G V DD E+ G +FA AD Sbjct: 106 VWDKQISPFDLHLIPVNMKSEEQVA--FAETLYTSLQDAGFSVLIDDRAERAGVKFADAD 163 Query: 397 LLGFPLQ 403 L+G P++ Sbjct: 164 LIGLPIR 170 >gi|255027747|ref|ZP_05299733.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-003] Length = 90 Score = 102 bits (255), Expect = 9e-20, Method: Composition-based stats. Identities = 46/89 (51%), Positives = 59/89 (66%) Query: 50 LDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPT 109 L + IIREE GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPT Sbjct: 2 LRKIETIIREELEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPT 61 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 HEEV+T + R +KSY+ LP T YQIQ K Sbjct: 62 HEEVITALLRDEVKSYKRLPLTLYQIQTK 90 >gi|300870146|ref|YP_003785017.1| threonyl-tRNA synthetase [Brachyspira pilosicoli 95/1000] gi|300687845|gb|ADK30516.1| threonyl-tRNA synthetase [Brachyspira pilosicoli 95/1000] Length = 643 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 100/435 (22%), Positives = 180/435 (41%), Gaps = 42/435 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 KY + + RD +L L + H G W P G V + IR E ++ Sbjct: 228 KYLKKLKEAKERDHRKLGKELNLFS--FHDEGPGFPFWHPNGMIIYKAVESYIRNENDKR 285 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E+ P + + +LW SG +D+Y KE + + +D P + ++ S+I S Sbjct: 286 GYVEIKTPAILNEELWHRSGHWDNY-KENMYFTEIDDTKYAVKPMNCPGGLIVYNSNIHS 344 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ R EL G+ R R F DA+ F T E YL Sbjct: 345 YRDLPLRVAELGFVHRHELSGALHGLFRVRAFTQDDAHIF-CTEEQLGDEIINTIEYYLS 403 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G K +F + T + S + + S D + Sbjct: 404 VYKDFGFK-----------------DFEIFVSTRPAKSIGSDEIWELATKSLMNALDKLG 446 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SAT 301 + E A Y D + + + D R + G + +SLPM + Sbjct: 447 ISYKVNEGDGAFYGPKIDFNIKDVLD----------RNWQCGTL---QVDFSLPMRFEIS 493 Query: 302 FKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ++G DGK H M I G+M ++ ++GK +W ++P +++++N+ +++ Sbjct: 494 YEGKDGKKHTPVMLHRAILGSMERFIGILVEHYNGKFPLW---LSPIQVAVVNV-LNEEA 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + ++ +L + G V D+ + +G++ L P VI+G++ VS+ K+ I+ Sbjct: 550 QINRVHEVAKKLKEAGFRVEIDESNDNLGTKIKKYRLQRTPYTVIIGAEEVSNGKLSIRT 609 Query: 421 RLTGIREDMSLEEVI 435 R + +DM L E + Sbjct: 610 RSSQEIKDMDLTEFM 624 >gi|253795645|ref|YP_003038741.1| putative prolyl-tRNA synthetase [Candidatus Hodgkinia cicadicola Dsem] gi|253739953|gb|ACT34288.1| putative prolyl-tRNA synthetase [Candidatus Hodgkinia cicadicola Dsem] Length = 371 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 56/318 (17%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H SKG+++ LP AL+ + + +R E N G E+ +P + R ++ + Sbjct: 17 VHALSKGVHTLLPQAVHALNKLTSAVRREMNALGFCEVLMPC---------AVRASAFDR 67 Query: 92 EMLRLADRNDKA---MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFG 148 + + D KA M+ PT E+V+ + + P YQ+QLKFR E RP G Sbjct: 68 RLRAMGDAFIKASNNMVLAPTAEDVVVAMPSA------CAPAKLYQVQLKFRLEPRPSHG 121 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 ++RS EF+MKD Y+ T G+ + + SY+R+ G++ P A + IGG S Sbjct: 122 LVRSYEFVMKDGYAVSATRRGALNELKAVMGSYVRVLRGAGIEVAPCVASARDIGGSHSL 181 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD--VHNEK 266 E + + G +V +K + +P+ SL S W A + + S V ++K Sbjct: 182 ELVAV---GLGRVAGAKYY----VPAR--------SLAS--ASWRARWLSFSKEYVDDQK 224 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 + + +S G+E+ H F F K V M S+G+G RVV Sbjct: 225 VVLG---SHFLSCEGVEIAHAFAFRKL--------------KRKKVWMASFGLGLSRVVG 267 Query: 327 AVIESSHDGKGIIWPDSV 344 + + +G+ + P +V Sbjct: 268 CAL--AGNGELTLAPAAV 283 >gi|213024164|ref|ZP_03338611.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 244 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 45/101 (44%), Positives = 67/101 (66%), Gaps = 2/101 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 133 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 192 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H Sbjct: 193 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMH 233 >gi|239994811|ref|ZP_04715335.1| prolyl-tRNA synthetase [Alteromonas macleodii ATCC 27126] Length = 131 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 78/129 (60%), Gaps = 1/129 (0%) Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYA 370 + MG YGIG R+VAA IE +HD GI WPD +APFKI+LI + H ++A E +Y Sbjct: 1 LTMGCYGIGVSRIVAAAIEQNHDKFGIKWPDPIAPFKIALIPMNMHKSHRIKEAAEALYE 60 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L +G +V +DD E+ G F +L+G P +++G + + + +VE K+R TG ++ + Sbjct: 61 ELVALGVEVLFDDRKERPGVMFNDMELIGIPHSIVIGERNLDNQQVEYKNRRTGEKQLLD 120 Query: 431 LEEVINYAS 439 + ++ + Sbjct: 121 ISAAKDFVA 129 >gi|71899287|ref|ZP_00681448.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1] gi|71730913|gb|EAO32983.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1] Length = 261 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 93/173 (53%), Gaps = 2/173 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS-ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D + ++ ARGIEVGH+F G KY+ M AT GK + MG Y Sbjct: 78 VADIRNVIEGDRAVDGGKICIARGIEVGHVFQLGRKYAEAMKATVLDEYGKAVTMTMGCY 137 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVG 376 GIG R+VAA IE +HD GIIWP +AP+++++ I D V A E + A L Sbjct: 138 GIGVSRIVAAAIEQNHDVAGIIWPAPIAPWQVAVCVINPKKDPVIIAAAELLLAELQSAD 197 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 D DD G + G FA +L+G P +++V + ++ E + R T + E++ Sbjct: 198 VDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRARRTAMVENL 250 >gi|296127837|ref|YP_003635089.1| threonyl-tRNA synthetase [Brachyspira murdochii DSM 12563] gi|296019653|gb|ADG72890.1| threonyl-tRNA synthetase [Brachyspira murdochii DSM 12563] Length = 643 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 100/435 (22%), Positives = 179/435 (41%), Gaps = 42/435 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 KY + + RD +L L + H+ G W P G V + IR E ++ Sbjct: 228 KYLKRLKEAKERDHRKLGKELNLFS--FHEEGPGFPFWHPRGMVIYKAVESYIRNENDKR 285 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E+ P + + +LW SG +D+Y KE + + ++ P + ++ S+I S Sbjct: 286 GYVEIKTPAILNEELWHRSGHWDNY-KENMYFTEIDETKYAVKPMNCPGGLIVYNSNIHS 344 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ R EL G+ R R F DA+ F T E YL Sbjct: 345 YRDLPLRVAELGFVHRHELSGALHGLFRVRAFTQDDAHIF-CTEEQLGDEIINTIEYYLS 403 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G ++ F + T + S + + S D + Sbjct: 404 VYKDFGFEN-----------------FEIFVSTRPAKSIGSDEIWELATKSLINALDKLG 446 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SAT 301 I E A Y D + + + D R + G + +SLPM + Sbjct: 447 IKYKINEGDGAFYGPKIDFNIKDVLD----------RNWQCGTL---QVDFSLPMRFEIS 493 Query: 302 FKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ++G DG+ H V + +G+M ++ ++GK +W ++P +++++N+ ++ Sbjct: 494 YEGKDGRKHTPVMLHRAILGSMERFIGILVEHYNGKFPLW---LSPLQVAVVNV-LDEKS 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ L G V D+ E +G++ L P VI+G++ VS+ K+ I+ Sbjct: 550 QIDRVNEVAKALKDAGFRVETDEGNENLGTKIKKYRLQRTPYTVIIGAEEVSNGKLSIRT 609 Query: 421 RLTGIREDMSLEEVI 435 R + +DM L E I Sbjct: 610 RSSQEIKDMDLNEFI 624 >gi|170595002|ref|XP_001902209.1| Met-10+ like-protein [Brugia malayi] gi|158590243|gb|EDP28945.1| Met-10+ like-protein [Brugia malayi] Length = 693 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 94/381 (24%), Positives = 169/381 (44%), Gaps = 58/381 (15%) Query: 43 LPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK 102 LP ++ +D + +I E N GA ++S+P L + ++W ++GR+ ++ EM L+D+ ++ Sbjct: 341 LPCCRRIIDKLIKVIETELNAIGAYKISMPILGAKEMWQKAGRWSAFKSEMFHLSDKTNQ 400 Query: 103 AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 PTHEE++T + ++ F Y L R++++ V+ +++ + Y Sbjct: 401 VYCLQPTHEEMVTKLVAEQTANHFYGNFDNY--ILHSRNQIK---SVLVTKKHFVLYFYL 455 Query: 163 FD----LTPEGSKHSYNKMF----------VSYLRIFH-RLGLKSIPMRAESGPIGGDLS 207 + E + Y M +Y RIFH RL + +RA++G IGGD+S Sbjct: 456 LNNGTATIGELREAVYPLMLYQMGPKFRDETTYQRIFHDRLDINFYIVRADAGNIGGDMS 515 Query: 208 HEFIVLADTGETQV-FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 HE+ + T + +CSK + N D ++++ P + + Sbjct: 516 HEYHLPCKTSRDSIAYCSKCNLGM-----NHD---------LLKRGEKPCCCSKE----- 556 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 + S+ E IE+ H F G ++ GA D + M +GIG ++A Sbjct: 557 -YISIVET-------IEIAHTFQLGDLFTKKF-----GAKHNDQPLIMNCFGIGIGLLIA 603 Query: 327 AVIES-SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC---DVFWD 382 +I S S K + ++ PFK+++I + E I LS++ D+F D Sbjct: 604 VIINSMSPSTKALRLLYALIPFKVAVILPNKTQSETMEFAENIIGHLSQISSVQNDIFVD 663 Query: 383 D-MGEQIGSQFAVADLLGFPL 402 D + IG + A LG L Sbjct: 664 DRLDNSIGRRLLTAANLGIFL 684 >gi|169607863|ref|XP_001797351.1| hypothetical protein SNOG_06993 [Phaeosphaeria nodorum SN15] gi|111064524|gb|EAT85644.1| hypothetical protein SNOG_06993 [Phaeosphaeria nodorum SN15] Length = 373 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/158 (34%), Positives = 89/158 (56%), Gaps = 7/158 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKG 337 A+ IEV H F+ GT+YS P+ A DGK VQMG +GIG R++ A+ D KG Sbjct: 210 AKAIEVAHTFHLGTRYSDPLGAIVSMPDGKTREAVQMGCHGIGVSRLIGAIASLLSDSKG 269 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 + WP +AP++ +++ Q+ E++Y L G D DD G+ +G + AD Sbjct: 270 LNWPRVMAPYEAAIL---VAPQIEEGGAERVYDALD--GVDAVLDDREGKSLGWKLRDAD 324 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L+G+P+ V++G + VE++ R +++D+ L+E+ Sbjct: 325 LIGYPVVVVMGRSWKEKGVVEVQCRRLDVKKDVGLDEL 362 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 37/66 (56%) Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 MKD Y+FD P + +Y + +Y IF L L + A+SG +GG LSHE+ ++ Sbjct: 1 MKDLYTFDSNPSAALETYEAVRSAYTAIFDALKLPYLVADADSGNMGGKLSHEYHFVSPK 60 Query: 217 GETQVF 222 GE V+ Sbjct: 61 GEDNVW 66 >gi|225619668|ref|YP_002720925.1| threonyl-tRNA synthetase [Brachyspira hyodysenteriae WA1] gi|225214487|gb|ACN83221.1| threonyl-tRNA synthetase [Brachyspira hyodysenteriae WA1] Length = 643 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 100/435 (22%), Positives = 178/435 (40%), Gaps = 42/435 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 KY + + RD +L L + H G W P G V + IR E ++ Sbjct: 228 KYLKKLKEAKERDHRKLGKELNLFS--FHDEGPGFPFWHPRGMIIYKAVESYIRNENDKR 285 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E+ P + + +LW SG +D+Y KE + + ++ P + ++ S+I S Sbjct: 286 GYVEIKTPAILNEELWHRSGHWDNY-KENMYFTEIDETKYAVKPMNCPGGLIVYNSNIHS 344 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ R EL G+ R R F DA+ F T E YL Sbjct: 345 YRDLPLRVAELGFVHRHELSGALHGLFRVRAFTQDDAHIF-CTEEQLGDEIINTIEYYLS 403 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G ++ F + T + S + + S D + Sbjct: 404 VYKDFGFEN-----------------FEIFVSTRPAKSIGSDEIWELATKSLINALDKLK 446 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SAT 301 I E A Y D + + + D R + G + +SLPM + Sbjct: 447 ISYKINEGDGAFYGPKIDFNIKDVLD----------RNWQCGTL---QVDFSLPMRFEIS 493 Query: 302 FKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ++G DGK H V + +G+M ++ ++GK +W ++P +++++N+ +++ Sbjct: 494 YEGKDGKKHTPVMLHRAILGSMERFIGILVEHYNGKFPLW---LSPLQVAVVNV-LNEKP 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ L G V D+ + +G++ L P VI+G++ VS K+ I+ Sbjct: 550 QIDRTNEVAKALKDAGFRVEVDESNDNLGTKIKKYRLQRTPYTVIIGAEEVSSGKLSIRT 609 Query: 421 RLTGIREDMSLEEVI 435 R + +DM L E I Sbjct: 610 RSSQEIKDMDLNEFI 624 >gi|154304091|ref|XP_001552451.1| hypothetical protein BC1G_09681 [Botryotinia fuckeliana B05.10] gi|150854316|gb|EDN29508.1| hypothetical protein BC1G_09681 [Botryotinia fuckeliana B05.10] Length = 426 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 25/184 (13%) Query: 280 RGIEVGHIFYFGTKYSLPMSAT-----------FKGAD-----GKDHYVQ----MGSYGI 319 + IE+GH F+ GT+YS PM AT K + G++ +Q MG +GI Sbjct: 246 KAIELGHTFHLGTRYSKPMEATVTVPSGLVGGNLKAGENEPQQGRNDQIQVPMEMGCHGI 305 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R+V AV E+ D KG+ WP +APF+I ++ K D+ DA + I+ LS D Sbjct: 306 GVTRMVGAVAETLADEKGLNWPRVMAPFEIVVVPGKGLDE---DALQ-IFDTLSAAAMDP 361 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD IG + ADL+G+P+ V++G K+ + E++ R ++ED+ +E++ N+ Sbjct: 362 VVDDREVSIGWKMKDADLIGYPVIVLLGRKW-KEGLCEVQCRRLDVKEDIRVEDLKNFVG 420 Query: 440 HRFS 443 S Sbjct: 421 KLLS 424 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 MKD Y+FD + +Y + +Y +F L + + A+SG IGGDLSHEF Sbjct: 1 MKDLYTFDYNSTSALSTYEDVRKAYHNLFDELKIPYLVAEADSGDIGGDLSHEFHFPTKI 60 Query: 217 GETQVF-CSK 225 GE + CSK Sbjct: 61 GEDNIISCSK 70 >gi|68475164|ref|XP_718300.1| potential proline-tRNA synthetase fragment [Candida albicans SC5314] gi|68475357|ref|XP_718201.1| potential proline-tRNA synthetase fragment [Candida albicans SC5314] gi|46439958|gb|EAK99269.1| potential proline-tRNA synthetase fragment [Candida albicans SC5314] gi|46440061|gb|EAK99371.1| potential proline-tRNA synthetase fragment [Candida albicans SC5314] Length = 411 Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 15/153 (9%) Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD----HYVQMGSYGIGAMRVVAAV 328 E K ++ IEVGH FY G KYS P++ + + MG YGIG R++AA+ Sbjct: 196 EGKLSASSAIEVGHTFYLGDKYSKPLNLEVDVPTSNNSIEKQRIMMGCYGIGISRIIAAI 255 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQV-----------CRDACEKIYARLSKVGC 377 E + D KG+ WP S+AP++++++ + Q+ +D ++IY L++ Sbjct: 256 AEINRDEKGLKWPRSIAPWEVTVVEVSKQKQLKNVNDNNHHNNPQDNFQEIYNILNQANI 315 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 D D+ + +G + +DLLG PL +I+G+++ Sbjct: 316 DYRLDNRSDSMGKKLKQSDLLGIPLSIILGNQY 348 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 37/62 (59%) Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 YSFDL + +Y K+ +Y +IF LG+ + A+SG IGG LSHE+ L +GE Sbjct: 3 YSFDLNESEAMKTYEKVVGAYHKIFQDLGIPYVKAEADSGDIGGSLSHEWHYLNSSGEDT 62 Query: 221 VF 222 VF Sbjct: 63 VF 64 >gi|73667729|ref|YP_303744.1| prolyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] gi|114152210|sp|Q46G28|SYP_METBF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|72394891|gb|AAZ69164.1| prolyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] Length = 480 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 95/416 (22%), Positives = 173/416 (41%), Gaps = 71/416 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLR 95 KG+Y W P G N IIRE + +G E P L + +++ + + E+ Sbjct: 37 KGLYVWYPFGFAIRRNTYNIIREILDNSGHQEALFPLLIPENEFMKEAEHIKGFEDEVYW 96 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D D + PT E + +++ ++S+ + P YQI FR E + ++R Sbjct: 97 VTHGGRDTLDIPLALRPTSETAIYPMYKMWVRSHADFPIKIYQIVNTFRYETKHTRPLIR 156 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE K+A++ T E ++ + Y I+ RLG+ + R Sbjct: 157 LREITSFKEAHTVHATWEDAEAQVKEAIGLYTEIYRRLGVPVLRSR-------------- 202 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D+ FP D+ D +L++I Sbjct: 203 -------------RPDWDKFP----GADYTD--ALDAI---------------------- 221 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +P+ R +++G + G ++ ++ DG+ Y YGI + R +AA I Sbjct: 222 MPD-----GRTLQIGTAHHLGDNFAKTFDIKYETPDGEQRYAYQTCYGI-SERSIAATIS 275 Query: 331 SSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 D KG++ P +AP ++ +I I K ++V AC+ + RL+K G V D + Sbjct: 276 IHGDDKGLVLPPEIAPVQVVIIPIIFKKGAEEVLA-ACKDVKERLTKAGIRVEIDASDLR 334 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G+++ ++ G PL++ +G + + ++ R TG +E +SL E+ S +F Sbjct: 335 PGAKYYKWEMKGVPLRLEIGPRDLQNNVAVAVRRDTGEKEQISLPEIEAGVSSKFE 390 >gi|3873219|gb|AAC77448.1| DrpA [Streptococcus mutans] Length = 91 Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 42/80 (52%), Positives = 58/80 (72%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L+E P DA++ SH LM+R G I Q + G+YS+LPL + ++ AI+REE ++ GA+EM Sbjct: 12 LREMPSDAQVISHALMVRAGYIRQVTSGVYSYLPLPNRVIEKFKAIMREEFDKIGAVEML 71 Query: 71 VPTLQSADLWVESGRYDSYG 90 PTL +ADLW ESGRYD+Y Sbjct: 72 APTLLTADLWKESGRYDTYA 91 >gi|218884312|ref|YP_002428694.1| prolyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n] gi|218765928|gb|ACL11327.1| prolyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n] Length = 479 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 100/408 (24%), Positives = 169/408 (41%), Gaps = 69/408 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEML- 94 KG+Y W+P G KAL II + +TG E PT+ ++ E +G E Sbjct: 36 KGMYVWMPYGLKALRLTQRIIVDLLEKTGHQEAYFPTMVPESVFSREKDFLQGFGGETFI 95 Query: 95 ---RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + R ++ + PT E VM ++ IK ++LP YQ+ FR E + ++R Sbjct: 96 VEGTMTRRFNERLFVRPTSETVMYYMWNMWIKGRKDLPLKMYQVVNVFRYETKMTHPILR 155 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE + +A++ + E ++ + Y F+RL L F Sbjct: 156 VREIMGFIEAHTAHHSREEAEKQIIEAIGIYKEFFNRLQLPY-----------------F 198 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 IV +T F ++ N DF + Sbjct: 199 IVKTPPWDT--FAGAEY--------NYDFITV---------------------------- 220 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +P+ K G+E+G + G K++ F DG++ YV YG+ + RV+ AVI Sbjct: 221 MPDGK-----GLELGSVINLGQKFAGAFEIKFMDTDGEEKYVYQTCYGV-SERVLGAVIG 274 Query: 331 SSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQI 388 D G+ +P +AP ++ ++ I K ++ + KI + L G VF D D+ Sbjct: 275 IHGDEVGLFFPPEIAPIQVVIVPIMKPGEKEILEYALKIGSMLESHGLRVFIDSDLEHTP 334 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G ++ ++ G P ++ VG++ V S V I R ++ + LEEV+ Sbjct: 335 GWKYYYWEMKGVPTRIEVGAREVETSTVTIARRDKREKQVVRLEEVLE 382 >gi|324513749|gb|ADY45635.1| Prolyl-tRNA synthetase [Ascaris suum] Length = 287 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 45/279 (16%) Query: 143 LRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH-RLGLKSIPMRAESGP 201 + PRFG++RSREFLM D YSFD++ E + +Y + +Y I L + +RA++G Sbjct: 1 MNPRFGLLRSREFLMNDLYSFDISEEDALKTYRIVSQAYNHILQDTLQFEVHVVRADNGQ 60 Query: 202 IGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS 260 IGG +SHE+ + + +GE + V+C K I + + Sbjct: 61 IGGAVSHEYHLPSTSGEDSIVYCEK------------------CSKGINAELARRHEKPC 102 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 E+ +P +E+ H F G +S + A ++ + M YG+G Sbjct: 103 SECTEECLKVIP--------SVEIAHTFQLGDLFSKSLGARYQNVA-----MVMNCYGLG 149 Query: 321 AMRVVAAVIES-SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA--------R 371 R++AA I+ S D + PD++ PFK+++I ++ D YA Sbjct: 150 IGRIMAAAIDVLSPDQNSLRLPDAICPFKMAIIPPADSSKI--DPELASYAISLAQQLDS 207 Query: 372 LSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSK 409 + + +VF+DD + IG + +A LG P +VGS+ Sbjct: 208 TTNLHNEVFYDDRTDYSIGKRLLLATQLGIPHIAVVGSR 246 >gi|156742938|ref|YP_001433067.1| proline--tRNA ligase [Roseiflexus castenholzii DSM 13941] gi|156234266|gb|ABU59049.1| Proline--tRNA ligase [Roseiflexus castenholzii DSM 13941] Length = 564 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 4/155 (2%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 G + H + G + ATF +G + + S+ + R + +IE D GI+W Sbjct: 408 GFTIVHAIHHG---AFAQDATFLDQEGVSRPIVLASFRMLLERALLTIIEQHCDQAGIVW 464 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 APF + LI + D R A + +Y L G V +DD E G +F ADL+G Sbjct: 465 TPETAPFDVHLIRLGKQDAT-RQAADALYDELIAAGIAVLYDDRNETAGVKFNDADLIGL 523 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 PL++++G +F++D VEIK R TG+ M +E+I Sbjct: 524 PLRLVIGDRFLTDGLVEIKQRATGMITKMPRQEII 558 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/289 (22%), Positives = 129/289 (44%), Gaps = 20/289 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F L+E P D + + +LMLR G+ + S G ++LP+G + L + A+ EE Sbjct: 1 MRISALFGRTLRETPADIDYPALRLMLRAGLA-RLSAGALAFLPIGTRVLRRLEAMAHEE 59 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSY---GKEMLRLADRNDKAMIYGPTHEEVMTDI 117 R GA E+ +P +++ S R S + +D++ + + + PT + + Sbjct: 60 LTRIGAQEIHLPPVRT---LSASDRVQSRLLPASSTMHGSDQSRRLLAFDPTDTTTIASL 116 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 S I SYR LP YQ ++ R + RE + Y+ + + ++ Sbjct: 117 AASEIASYRQLPALLYQRHPISCNDCRSSW----LREEIALTVYALGGGAHELEETGTQV 172 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGD--LSHEFIVLADTGETQVFCSKDFMDFPI-PS 234 + ++ RIF R + I AE+G G + ++ ++ +++ G+ + + I + Sbjct: 173 YSAFERIFRRCDMHLIA--AEAGYTGENDQVTRAYVAVSEHGDIDLMICESCSYTAIREA 230 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATS----DVHNEKLFDSLPENKRVSA 279 T FD ++ + + ++ P A + + + F +PE+ A Sbjct: 231 ARTAFDSTLATSMMKDEPDHPEAIATPNCATIADLARFCGVPESATAKA 279 >gi|313619135|gb|EFR90924.1| prolyl-tRNA synthetase [Listeria innocua FSL S4-378] Length = 145 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 13/152 (8%) Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAH 357 AT +G+ + MG YGIG R+++A+ E S+D G++W ++PF + LI N+K+ Sbjct: 1 ATILDENGRAQPIIMGCYGIGLSRILSAIAEQSNDENGLVWDKQISPFDLHLIPVNMKSE 60 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 +QV E +Y L K G V DD E+ G +FA ADL+G P+++ VG K ++ VE Sbjct: 61 EQVA--FAESLYDSLQKAGFSVLIDDRTERAGVKFADADLIGLPIRITVGKK-AAEGIVE 117 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 +K R TG E+I N P+L Sbjct: 118 VKIRKTG--------EMIEVRQDELLNTLPIL 141 >gi|313680219|ref|YP_004057958.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Oceanithermus profundus DSM 14977] gi|313152934|gb|ADR36785.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Oceanithermus profundus DSM 14977] Length = 649 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 101/420 (24%), Positives = 169/420 (40%), Gaps = 49/420 (11%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + A +R+EQ + G ++ P + S +L+ SG Y Y + Sbjct: 266 GKGLVLWLPKGNVLREELVAFMRDEQIKRGYQLVTTPHIGSLELYKTSGHYPYYAESQFP 325 Query: 96 LADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + D +A + P + I+ +SYR LP + +R E G+ R R Sbjct: 326 PMELEDGEAYLLKPMNCPHHVRIYAMRPRSYRELPLRLAEFGTVYRFEQSGELHGLTRVR 385 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG-----GDLSH 208 F DA+ F TPE K + + L++F LGL R G GD H Sbjct: 386 GFTQDDAHIF-CTPEQVKEEFLGVLDLTLKVFRTLGLSDFRARIGVRDPGSDKYVGDAEH 444 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + + Q C + +D+ I + F L+ +V Sbjct: 445 WAVA---ERQIQEACDEAGLDYTIEEGDAAFYG-PKLDFVV------------------- 481 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 K V +R ++G I Y+LP +KGADG++H V + G++ Sbjct: 482 ------KDVLSREWQLGTI---QVDYNLPERFDIGYKGADGEEHRPVMIHRAPFGSLERF 532 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ G+ +W +AP ++ ++ I D K+ A L G V DD Sbjct: 533 IGILIEHFAGEFPLW---LAPVQVVVVPITDRHH---DYARKVRAELEAAGLRVEVDDRP 586 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 E++ ++ A+ P+ ++VG K + V ++ R TG R +L EV+ + R Sbjct: 587 ERMNAKIRDAETQKVPVILVVGDKETEEGTVAVRDRRTGERTTRALSEVVRDLAERVRTR 646 >gi|148656401|ref|YP_001276606.1| proline--tRNA ligase [Roseiflexus sp. RS-1] gi|148568511|gb|ABQ90656.1| Proline--tRNA ligase [Roseiflexus sp. RS-1] Length = 571 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 1/155 (0%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 G +G +G + ATF +G + M + I RV+ +E D GI+W Sbjct: 408 GFIIGRDLRYGARSVQVSGATFLDREGVVRPITMSLFSIALERVLLVAVEQHCDQSGIVW 467 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 +APF + L+ + D R A + +Y L+ G V +DD E G +F ADL+G Sbjct: 468 SPEIAPFHVHLVRLGKQDAT-RQAADALYDELTAAGIAVLYDDRDETAGVKFNDADLIGA 526 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 PL++++G +F+SD VE+K R +G+ E++ Sbjct: 527 PLRLVIGDRFLSDGLVEVKQRASGVIAKTPQSEIV 561 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 106/222 (47%), Gaps = 5/222 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + F L+++P + + +LM+R G++ + S G + LP+G +AL + I+REE Sbjct: 1 MRMTTLFGRTLRQSPSEINHPTLRLMVRAGLV-RLSSGALTLLPVGTRALRRIEMIVREE 59 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G E+ +P +S + +L D+ +++ PT E + + + Sbjct: 60 LTRIGLQEVYLPLFRSGAPLDPLFSSLASASSILHCTDQFGRSLSILPTDEAWIASLAAT 119 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQ++ + + R + R + Y+ D + + S + + Sbjct: 120 EIASYRQLPVLLYQVRPTYCGDCRSSW----LRAGVTAIIYALDHSDADVQESSALVRQA 175 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 + R+F R+ ++ P+ A P+ GD + ++ L++ G+ + Sbjct: 176 FTRLFERINVQVAPVEAGRDPVSGDEAFAYVALSEYGDVDLM 217 >gi|21226809|ref|NP_632731.1| prolyl-tRNA synthetase [Methanosarcina mazei Go1] gi|74580278|sp|Q8PYZ1|SYP_METMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|20905107|gb|AAM30403.1| Prolyl-tRNA synthetase [Methanosarcina mazei Go1] Length = 480 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 90/407 (22%), Positives = 172/407 (42%), Gaps = 71/407 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLR 95 KG+Y W P G N +IIRE + +G E P L + +++ + + E+ Sbjct: 37 KGLYVWYPFGFAIRRNTYSIIREILDNSGHQETLFPLLIPENEFMKEAEHIKGFENEVYW 96 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D D + PT E + +++ ++S+ + P YQI FR E + ++R Sbjct: 97 VTHGGKDPLDIPLALRPTSETAIYPMYKKWVRSHADFPLKLYQIVNTFRYETKHTRPLIR 156 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE K+A++ T E ++ + Y I+ RL ++P+ P Sbjct: 157 LREITSFKEAHTVHATWEDAEAQVKEAIGLYTEIYRRL---AVPVLRSRRP--------- 204 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D+ FP D+ D +L+++ Sbjct: 205 ---------------DWDKFP----GADYTD--ALDAV---------------------- 221 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +P+ K +++G + + G ++ ++ DG+ Y YGI + R +AA I Sbjct: 222 MPDGKT-----LQIGTVHHLGDNFAKTFDIKYEAPDGEQRYAHQTCYGI-SERSIAATIS 275 Query: 331 SSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 D KG++ P +AP ++ +I I K ++V AC+ + RL K G V D + Sbjct: 276 IHGDDKGLVLPPEIAPVQVVIIPIIFKKGAEEVFA-ACKDVQERLKKAGIRVEVDASDLR 334 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G+++ ++ G PL++ +G + + ++ R TG ++ ++L E+ Sbjct: 335 PGAKYYKWEMKGVPLRLEIGPRDLQNNVAVAVRRDTGEKDQITLLEI 381 >gi|315425642|dbj|BAJ47301.1| prolyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] Length = 484 Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 95/431 (22%), Positives = 172/431 (39%), Gaps = 72/431 (16%) Query: 24 KLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW- 80 KL+L ++ KG +L G L V ++ +E TG EM P + + +L Sbjct: 26 KLLLEARIVDDRFPVKGFSVYLENGAYILRRVREMLEKELRETGHKEMIFPLVTTEELLG 85 Query: 81 VESGRYDSYGKEMLRLADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 E+ + E+ + D +I PT E +M +F+ I+S+ +LP +Q Sbjct: 86 KEAQHIKGFSTEVFVIESAGGKPLDVKLIVRPTSETIMYPMFKLWIRSHADLPLLVHQSN 145 Query: 137 LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 + +R E + ++R RE +A++ T ++ K Y ++ +LGL + Sbjct: 146 MVYRHETKATRPLLRVREIPWNEAHTVHATAAEAEQQVRKAVEIYRKVLDQLGLAYL--- 202 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 V DF FP A Y Sbjct: 203 ------------------------VLKRPDFDKFP---------------------GARY 217 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 + FD+ + RV+ +V + G +S F+ DGK Sbjct: 218 SIA--------FDAWNPDGRVN----QVATVHNLGKNFSKVFEIEFETRDGKRENPHQLC 265 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSK 374 YG G RV+AA+I D +G++ P VAP + ++ I K ++ + C + RL K Sbjct: 266 YGFGYSRVLAALISQHGDDRGLVLPPVVAPLHVVIVPIVFKGQEESIKQFCHSLAERLQK 325 Query: 375 VGCDVFWDDMGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 V DD + G +F + LG P+++ +G + V++++ + R T ++ +++EE Sbjct: 326 FAVKV--DDREDVTPGEKFYHWEKLGVPVRLEIGPREVAENRATLFRRDTLEKQVVAVEE 383 Query: 434 VINYASHRFSN 444 + + +N Sbjct: 384 IERAVENVLTN 394 >gi|207092594|ref|ZP_03240381.1| prolyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1] Length = 372 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 77/142 (54%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E D G + Sbjct: 207 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILEQKSDDLGCV 266 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + APF + ++ D+ + ++Y RL + G D DD + G++ +L+G Sbjct: 267 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFELIG 326 Query: 400 FPLQVIVGSKFVSDSKVEIKHR 421 L +IVG + + + E R Sbjct: 327 ERLALIVGKQTLESKEFECIKR 348 >gi|297527274|ref|YP_003669298.1| prolyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] gi|297256190|gb|ADI32399.1| prolyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] Length = 483 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 94/408 (23%), Positives = 166/408 (40%), Gaps = 69/408 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEML- 94 KG+ W+P G KAL + I+ TG E PT+ ++ + + +G E Sbjct: 39 KGMNVWMPYGLKALRMIQKIMINLLEETGHEEAYFPTMIPESVFSKEKDFLQGFGGETFV 98 Query: 95 ---RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + + ++ + PT E VM ++ IK ++LP YQI FR E + ++R Sbjct: 99 VEGTMTKKFNEKLFVRPTSETVMYYMWNIWIKGRKDLPLKMYQIVNVFRYETKMTHPILR 158 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE + +A++ T E ++ N+ Y + F L L F Sbjct: 159 VREIMSFIEAHTAHATSEEAEKQINEALNIYKKFFDSL-----------------LLPYF 201 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 IV +T F ++ N DF + Sbjct: 202 IVKTPPWDT--FAGAEY--------NYDF----------------------------ITA 223 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +P+ K G+E+G + G K++ F +DGK YV YG+ R + AVI Sbjct: 224 MPDGK-----GLELGSVINLGQKFARAFDIKFMDSDGKTKYVYQTCYGVSE-RTLGAVIA 277 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKVGCDVFWDDMGEQI- 388 D KG+ P +AP ++ ++ I D Q + I +LS+ G + DD E Sbjct: 278 IHGDKKGLFLPPIIAPIQVVIVPIARRDEQDIIEYARGISEKLSEAGIRTYLDDDPEHTP 337 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G ++ ++ G P ++ +G + ++++ V I R + +++ E+I+ Sbjct: 338 GWKYYFWEMKGVPTRIEIGRRELNNNTVTIARRDGAKKITVNINELID 385 >gi|325969359|ref|YP_004245551.1| prolyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] gi|323708562|gb|ADY02049.1| prolyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] Length = 510 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 101/394 (25%), Positives = 160/394 (40%), Gaps = 68/394 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-LWVESGRYDSYGKEMLR 95 KG Y W P G K V +R + TG E+ P + L ES + E+ Sbjct: 63 KGAYVWRPYGMKIRRLVETYVRFLHDETGHQEVLFPVFIPYEFLAKESEHIRGFESEVFW 122 Query: 96 LAD--RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 ++ N++ ++ PT E M +F+ IK + +LPF YQI FR E + ++R R Sbjct: 123 VSKGGANEERLVLRPTSETAMMPMFKLWIKDHTDLPFRVYQIVSVFRAETKATRPMIRLR 182 Query: 154 EFLM-KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 E M K+A++ E ++ + Y +IF LG IP P + Sbjct: 183 EISMFKEAHTAHADREDAERQVREAVEIYKKIFDYLG---IPYLINQRPEWDKFAGAVYT 239 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 +A FD ++ ++ T Y T+ K+FD Sbjct: 240 MA------------------------FDTVMPDGKTMQIGTVHYLGTN---FSKVFD--- 269 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 KY P +G YV SYGI RV+AA+I Sbjct: 270 -------------------VKYLTP--------NGDWDYVHTTSYGISE-RVIAAMIAMH 301 Query: 333 HDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-G 389 D KG++ P +VAP ++ +I I K +++ I LS VG V DD ++ G Sbjct: 302 GDDKGLVLPPNVAPIQVIIIPIMYKGTEEIILRETRSIQEELSNVGIRVKIDDRTDRTPG 361 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ ++LG PL++ +G K + + +V + R T Sbjct: 362 WKYNYWEMLGVPLRIEIGPKDIENRQVVLARRDT 395 >gi|119495835|ref|XP_001264694.1| prolyl-tRNA synthetase [Neosartorya fischeri NRRL 181] gi|119412856|gb|EAW22797.1| prolyl-tRNA synthetase [Neosartorya fischeri NRRL 181] Length = 441 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 94/170 (55%), Gaps = 17/170 (10%) Query: 281 GIEVGHIFYFGTKYSLPMSATF-------KGADGKDHYV--QMGSYGIGAMRVVAAVIES 331 +E+GH F+ GT+YS + A+ G+ KD V QMG +GIG R+++AV +S Sbjct: 268 AVELGHTFHLGTRYSEVLQASVMVDRSLSGGSQSKDQLVPLQMGCHGIGVSRMISAVADS 327 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL---SKVGCDVFWDDMGEQI 388 D KG+ WP ++AP+++ ++ K + EK+Y L D DD + + Sbjct: 328 LADSKGLNWPRAMAPYEVVVVPGKGLET----EAEKVYDSLVSNHTSSIDAILDDRDKPM 383 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDMSLEEVINY 437 G + ADL+G+P+ V+VG + +E++ RL +RED+ L+++ ++ Sbjct: 384 GWKLGDADLIGYPVIVVVGKGWKKAQTLEVQCRRLDNLREDVPLDQLPSF 433 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 MKD Y+FD + E + +YN + +Y +F L + + A+SG +GG LSHEF + Sbjct: 1 MKDLYTFDYSVEEALKTYNLVKAAYKNLFDELKIPYLVAAADSGNMGGSLSHEFHFPSSK 60 Query: 217 GE-TQVFCS 224 GE T + CS Sbjct: 61 GEDTVISCS 69 >gi|20092682|ref|NP_618757.1| prolyl-tRNA synthetase [Methanosarcina acetivorans C2A] gi|74580394|sp|Q8TJA2|SYP_METAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|19917968|gb|AAM07237.1| prolyl-tRNA synthetase [Methanosarcina acetivorans C2A] Length = 480 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 92/416 (22%), Positives = 166/416 (39%), Gaps = 71/416 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLR 95 KG+Y W P G + IIRE + +G E P L + +++ + + E+ Sbjct: 37 KGLYVWYPFGFAIRRSTYNIIREILDNSGHQETLFPLLIPENEFMKEAEHIKGFENEVYW 96 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D D + PT E + +++ ++S+ + P YQI FR E + ++R Sbjct: 97 VTHGGKDSLDIPLALRPTSETAIYPMYKMWVRSHADFPIKLYQIVNTFRYETKHTRPLIR 156 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE K+A++ T E ++ + Y I+ RL ++P+ P Sbjct: 157 LREITSFKEAHTVHATWEDAEAQVKEAVELYTEIYRRL---AVPVLRSRRP--------- 204 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D+ FP D+ D I A D Sbjct: 205 ---------------DWDKFP----GADYTDAID------------AMMPD--------- 224 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 R +++G + + G ++ ++ DG+ Y YGI + R +AA I Sbjct: 225 --------GRTLQIGTVHHLGDNFAKTFDIKYEAPDGEQRYAHQTCYGI-SERSIAATIS 275 Query: 331 SSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 D KG++ P +AP ++ +I I K ++V AC + RL K G V D + Sbjct: 276 IHGDDKGLVLPPEIAPVQVVIIPIIFKKGAEEVLA-ACRDVQERLKKTGVKVEIDASDLR 334 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G+++ ++ G PL++ +G + + ++ R TG +E + L E+ +F Sbjct: 335 PGAKYYRWEMKGVPLRLEIGPRDLENNVAVSVRRDTGEKEQIPLPEIETGVLQKFE 390 >gi|67518071|ref|XP_658805.1| hypothetical protein AN1201.2 [Aspergillus nidulans FGSC A4] gi|40746638|gb|EAA65794.1| hypothetical protein AN1201.2 [Aspergillus nidulans FGSC A4] Length = 416 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 17/160 (10%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 S +E+GH F+ GT+YS + A ++ +QMG +GIG R++ AV +S D KG Sbjct: 250 SQTTVELGHTFHLGTRYSEVLKARIVNSENDRVPMQMGCHGIGVSRMITAVADSLADAKG 309 Query: 338 IIWPDSVAPFKISLI--------NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + WP +AP+++ ++ + +D + D I DV DD + G Sbjct: 310 LNWPKIIAPWEVVIVPAPGNQEDALGVYDLLASDKASPI---------DVLLDDRDKTTG 360 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 + ADL+G+P+ V+VG+ + ++ +E++ R GIR+D+ Sbjct: 361 WKLGDADLIGYPVIVVVGNGWKTNRILEVQCRRLGIRQDV 400 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 MKD Y+FD E + +Y + +Y R+F+ L + + A+SG +GG++SHEF ++ Sbjct: 1 MKDLYTFDDNVENALRTYESVKSAYTRLFNELKIPYLTAAADSGNMGGNMSHEFHFISSK 60 Query: 217 GE-TQVFCS 224 GE T + C+ Sbjct: 61 GEDTLISCN 69 >gi|259488480|tpe|CBF87946.1| TPA: prolyl-tRNA synthetase (AFU_orthologue; AFUA_1G10750) [Aspergillus nidulans FGSC A4] Length = 427 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 17/160 (10%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 S +E+GH F+ GT+YS + A ++ +QMG +GIG R++ AV +S D KG Sbjct: 261 SQTTVELGHTFHLGTRYSEVLKARIVNSENDRVPMQMGCHGIGVSRMITAVADSLADAKG 320 Query: 338 IIWPDSVAPFKISLI--------NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + WP +AP+++ ++ + +D + D I DV DD + G Sbjct: 321 LNWPKIIAPWEVVIVPAPGNQEDALGVYDLLASDKASPI---------DVLLDDRDKTTG 371 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 + ADL+G+P+ V+VG+ + ++ +E++ R GIR+D+ Sbjct: 372 WKLGDADLIGYPVIVVVGNGWKTNRILEVQCRRLGIRQDV 411 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 MKD Y+FD E + +Y + +Y R+F+ L + + A+SG +GG++SHEF ++ Sbjct: 1 MKDLYTFDDNVENALRTYESVKSAYTRLFNELKIPYLTAAADSGNMGGNMSHEFHFISSK 60 Query: 217 GE-TQVFCS 224 GE T + C+ Sbjct: 61 GEDTLISCN 69 >gi|327401992|ref|YP_004342831.1| Prolyl-tRNA synthetase [Archaeoglobus veneficus SNP6] gi|327317500|gb|AEA48116.1| Prolyl-tRNA synthetase [Archaeoglobus veneficus SNP6] Length = 482 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 93/406 (22%), Positives = 163/406 (40%), Gaps = 70/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+Y W P G K V +RE +R E+ P L +L E + E+ Sbjct: 36 KGLYVWYPFGFKIRQLVYGKLREIMDRDHD-EVYFPALIPETELGREGEHIKGFEDEVYW 94 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D + PT E M +F+ I+S+ +LP YQI FR E + ++R Sbjct: 95 VTHGGLTPLDVKLALRPTSETAMYPMFKLWIRSHADLPLKVYQIVNTFRYETKHTRPLIR 154 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE K+A++ T E ++ K Y + L + + +R Sbjct: 155 LREITSFKEAHTVHRTFEEAEEQVRKAVGYYKEFYDFLAIPYLVIR-------------- 200 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ FP + FD ++ Sbjct: 201 -------------RPEWDKFPGAAYTIAFDTVMP-------------------------- 221 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 R +++G + + G ++ T++ DG+ + YGI + R +AA+I Sbjct: 222 -------DGRTMQIGTVHHLGDNFARTFGITYEKPDGEHEFAHQTCYGI-SERCIAALIS 273 Query: 331 SSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 D G+I P V+P +I +I + K ++ + CEKI+ RL G V DD E+ Sbjct: 274 IHGDDLGLILPFEVSPTQIVIIPVLYKGKEKEVLELCEKIFDRLKGFGYRVLLDDSDERP 333 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G+++ +L G +++ VG K V+++ V + R + +S+EE+ Sbjct: 334 GAKYYRWELKGAAMRIEVGPKEVAENAVVVSFRDERKKFKISVEEL 379 >gi|282164523|ref|YP_003356908.1| prolyl-tRNA synthetase [Methanocella paludicola SANAE] gi|282156837|dbj|BAI61925.1| prolyl-tRNA synthetase [Methanocella paludicola SANAE] Length = 474 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 94/431 (21%), Positives = 177/431 (41%), Gaps = 78/431 (18%) Query: 15 PRD--AEIASHKLMLRTGM-IHQHSKGIYSWLPLG---QKALDNVNAIIREEQNRTGAIE 68 P+D +E + LM+ M + KGIY W P G +K + N+ + + ++ Sbjct: 10 PKDNFSEWYNELLMMAQVMDVRYPIKGIYVWYPFGFSIRKKVYNMLRALMDVDHQECYFP 69 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRN----DKAMIYGPTHEEVMTDIFRSHIKS 124 M +P +L ES + E+ + + + PT E + +++ I+S Sbjct: 70 MLIP---KPELLKESEHIKGFEDEVYWVTHGGLSPLEIPLALRPTSETAIYPMYKLWIRS 126 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLR 183 + +LP YQI FR E + ++R RE K+A++ T E ++ ++ Y Sbjct: 127 HADLPLKLYQIVNTFRYETKQTRPLIRLREITSFKEAHTAHATWEDAEKQVHEAMDLYSD 186 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 F +L S+P P D+ FP FD ++ Sbjct: 187 FFTKL---SVPFVINKRP------------------------DWDKFPGADYTMAFDTLM 219 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + R +++G + + GTK++ T++ Sbjct: 220 P---------------------------------NGRSLQIGTVHHLGTKFAKTYDITYE 246 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVC 361 G+ YV YGI R +AAVI D KG++ P + AP ++ +I I K+ + Sbjct: 247 DDKGERQYVNQTCYGISE-RCIAAVIGIHGDNKGLVLPPNAAPTQVVIIPIVFKSGGEEV 305 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D C K+ A L+ G DD E+ G+++ ++ G P ++ +G + + ++ V + R Sbjct: 306 LDVCRKVKAILNDSGITAVLDDTNERPGAKYYKWEMKGVPFRIEIGPRDIKNNAVMLVRR 365 Query: 422 LTGIREDMSLE 432 G+++ + ++ Sbjct: 366 -DGVKQSIPMD 375 >gi|126466059|ref|YP_001041168.1| prolyl-tRNA synthetase [Staphylothermus marinus F1] gi|126014882|gb|ABN70260.1| prolyl-tRNA synthetase [Staphylothermus marinus F1] Length = 493 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 92/408 (22%), Positives = 166/408 (40%), Gaps = 69/408 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEML- 94 KG+ W+P G KAL + I+ TG E PT+ ++ + + +G E Sbjct: 49 KGMNVWMPYGLKALRMIQKIMINLLEETGHEEAYFPTMIPESVFSKEKDFLQGFGGETFV 108 Query: 95 ---RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + + ++ + PT E VM ++ IK ++LP YQ+ FR E + ++R Sbjct: 109 VEGTMTKKFNEKLFVRPTSETVMYYMWNIWIKGRKDLPLKMYQVVNVFRYETKMTHPILR 168 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE + +A++ T E ++ N+ Y + F L L F Sbjct: 169 VREIMSFIEAHTAHATSEEAEKQINEALSIYKKFFDSL-----------------LLPYF 211 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 IV +T F ++ N DF + Sbjct: 212 IVKTPPWDT--FAGAEY--------NYDF----------------------------ITA 233 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +P+ K G+E+G + G K++ F +DG +V YG+ R + AVI Sbjct: 234 MPDGK-----GLELGSVINLGQKFARAFDIKFMDSDGVTKHVYQTCYGVSE-RTLGAVIA 287 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKVGCDVFWDDMGEQI- 388 D KG+ P +AP ++ ++ I D Q + +KI +L K G F DD E Sbjct: 288 IHGDQKGLFLPPIIAPIQVVIVPIARRDEQDIIEYAKKISEKLKKAGIRTFLDDDPEHTP 347 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G ++ ++ G P ++ +G + ++++ V I R + +S+ ++++ Sbjct: 348 GWKYYFWEMKGVPTRIEIGRRELNNNTVTIARRDGAKKITVSINDMVD 395 >gi|332796853|ref|YP_004458353.1| prolyl-tRNA synthetase [Acidianus hospitalis W1] gi|332694588|gb|AEE94055.1| prolyl-tRNA synthetase [Acidianus hospitalis W1] Length = 481 Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 108/411 (26%), Positives = 168/411 (40%), Gaps = 98/411 (23%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL----------------W 80 KG+ W+P G K NV IIR+ + TG E+ P L L W Sbjct: 34 KGMGVWMPYGFKIRQNVINIIRKFLDETGHEEVLFPLLIPEYLLRKESEHIKGFEGEVYW 93 Query: 81 VESGRYDSYGKEML--RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 V G G+E L RLA R PT E +T + IKSY+ LP +YQI Sbjct: 94 VTKG-----GEEDLDIRLALR--------PTSEVAITYMESLWIKSYKELPKKYYQIVSI 140 Query: 139 FRDELRPRFGVMRSREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 FR E + ++R RE K+A++ ++ E ++ + Y +IF LG IP Sbjct: 141 FRYETKATRPMIRLREVTTFKEAHTLHVSYEDAERQVKEAIEIYKKIFDTLG---IPY-- 195 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 +L++ E F +E+T YA Sbjct: 196 --------------ILSERPEWDRFAG---------AEHT------------------YA 214 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 FD+L + R +++G + + G ++ + + ADG Y SY Sbjct: 215 ----------FDTLMPD----GRALQIGTVHHLGQHFTKALDYKIQKADGSLDYPYQTSY 260 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH----DQVCRDACEKIYARLS 373 GI RV+A I + D G I +AP K+ +I I A ++ + C++I +LS Sbjct: 261 GISD-RVIAVSIAVNGDDHGPILNPIIAPIKVVIIPIPAKTEEDNKRVENYCKEIQEKLS 319 Query: 374 KVGCDVFWDDMGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 G D E+ G +F ++ G PL++ +G + V++ + IK R T Sbjct: 320 SAGISAVVDSDKEKTPGEKFYYWEMKGVPLRIEIGLREVNNETITIKRRDT 370 >gi|46205115|ref|ZP_00049003.2| COG0442: Prolyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 260 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 1/105 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIE+GHIF G KY+ + T +GK V MGSYGIG RV+AA+ E++HD G+ Sbjct: 150 ARGIEIGHIFALGRKYAQALGLTVLDENGKQVVVTMGSYGIGVTRVLAALAEANHDDAGL 209 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 WP VAP ++ ++ V +A E++ LS G +V +DD Sbjct: 210 AWPAHVAPAQVHVVATGKDASVFEEA-ERLATELSGRGVEVIYDD 253 >gi|294495462|ref|YP_003541955.1| prolyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] gi|292666461|gb|ADE36310.1| prolyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] Length = 478 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 87/415 (20%), Positives = 173/415 (41%), Gaps = 69/415 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+Y W P G +I+RE +R M + + E+ + +E+ + Sbjct: 37 KGLYVWHPFGFTIRKKTYSIMRELLDRDHEETMFPLLIPEHEFMKEAQHIKGFEEEVYWV 96 Query: 97 ADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 + PT E + +++ ++S+ +LP YQI FR E + ++R Sbjct: 97 THGGTSPLEVNLALRPTSETAIYPMYKLWVRSHADLPLRLYQIVNTFRYETKHTRPLIRL 156 Query: 153 REFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE K+A++ T E + ++ Y + RL +IP+ + P Sbjct: 157 REITSFKEAHTVHATWEDAASQIDEAMRIYKEFYRRL---AIPVLSSKRP---------- 203 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 ++ FP D I+++S+ + Sbjct: 204 --------------EWDKFP------GADYTIAVDSL----------------------M 221 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P+ R ++VG + G ++ T++ ++G+ Y YG+ + R +AA+I + Sbjct: 222 PD-----GRTLQVGTAHHLGDNFAKTFEITYEDSEGEQVYAHQACYGV-SERCLAALIST 275 Query: 332 SHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 D KG++ P VAP ++ +I I K ++V ACE + L G V DD ++ G Sbjct: 276 HGDDKGLVLPPEVAPVQVVIIPIIFKKPEEVL-SACEMVAEDLKDAGIKVKIDDSDKRPG 334 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +++ ++ G P+++ +G + + + + R TG +E + LE++ + F++ Sbjct: 335 AKYYKWEMQGVPIRLEIGPRDLKNQAAMMARRDTGEKEQIPLEDISSTIKDTFAD 389 >gi|296423890|ref|XP_002841485.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637725|emb|CAZ85676.1| unnamed protein product [Tuber melanosporum] Length = 419 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 29/222 (13%) Query: 225 KDFMD-FPIPS-----ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 K MD FPIP+ +N +F ++L I P K + Sbjct: 198 KKAMDYFPIPTISITPDNPEFGSSLNLLKIQGGDGCPKCGVG--------------KLKT 243 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 IE+GH F+ GT+Y++P+ A G+ + MG +GIG R++ A+ E D G+ Sbjct: 244 TGAIELGHTFHLGTRYTVPLRANVLNEAGEWKPMVMGCHGIGVSRMIPAIAEGYSDHNGL 303 Query: 339 IWPDSVAPFKISLI--NIKAHDQV-CRDACEKIYARLSKVG------CDVFWDDMGEQIG 389 WP VAP+ + L+ ++K + V ++ E +Y L G DV DD + I Sbjct: 304 CWPRVVAPYDVVLVCGSMKKNAVVPPKEDIEAVYDVLVSKGLAGGTDVDVILDDRDKDIV 363 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 + A L+G+P+ I+G +V KVEI+ R TG R + L Sbjct: 364 WKIKDAVLVGYPIMCIMGKSWVDSKKVEIEVRKTGARLGVEL 405 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 40/70 (57%) Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 MKD Y+FD T + + +Y ++ +Y +F +GL I A+SG +GG +SHE+ + + Sbjct: 1 MKDLYTFDATEDAALKTYRQVQGAYQALFEEIGLPYIHAEADSGNMGGSVSHEYHFPSLS 60 Query: 217 GETQVFCSKD 226 GE V D Sbjct: 61 GEDTVISCPD 70 >gi|167949162|ref|ZP_02536236.1| Prolyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 121 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDAC 365 GK + MG YGIG RVVAA IE HD GI WP S+APF++++ +K H R+ Sbjct: 4 GKAVVMTMGCYGIGVSRVVAATIEQHHDEHGISWPASIAPFQVAICPMKLHKSARVREPV 63 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 E++Y L +G +V DD + G FA +L+G P +V++G + Sbjct: 64 EQLYTELQALGIEVLLDDRDVRPGFMFADMELIGIPHRVVIGER 107 >gi|212697112|ref|ZP_03305240.1| hypothetical protein ANHYDRO_01678 [Anaerococcus hydrogenalis DSM 7454] gi|212675887|gb|EEB35494.1| hypothetical protein ANHYDRO_01678 [Anaerococcus hydrogenalis DSM 7454] Length = 134 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/124 (43%), Positives = 70/124 (56%), Gaps = 5/124 (4%) Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK--ISLINIKAHDQVCRDACEKIYAR 371 MGSYGIG R ++A+IE ++D GIIWP VAPF+ I+L+N DQ + EKIY Sbjct: 1 MGSYGIGITRSISAIIEQNYDDNGIIWPTKVAPFEAWITLVNKNKEDQ--KQLAEKIYES 58 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD E+ G +F DL+G P ++ VG K SD VE R MS Sbjct: 59 LLDQGIEVMLDDRKERAGVKFNDRDLVGCPYRITVG-KDASDDIVEFSKRSDMENLKMSS 117 Query: 432 EEVI 435 +E I Sbjct: 118 DEAI 121 >gi|68475162|ref|XP_718299.1| potential proline-tRNA synthetase fragment [Candida albicans SC5314] gi|68475355|ref|XP_718200.1| potential proline-tRNA synthetase fragment [Candida albicans SC5314] gi|46439957|gb|EAK99268.1| potential proline-tRNA synthetase fragment [Candida albicans SC5314] gi|46440060|gb|EAK99370.1| potential proline-tRNA synthetase fragment [Candida albicans SC5314] Length = 169 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 81/145 (55%), Gaps = 4/145 (2%) Query: 19 EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD 78 +I +H+++ + G I G+ +W +G + ++ IIR+ + E+S+ + + Sbjct: 29 QIPTHEVLTKLGYITYPRAGLVNWSKMGLLIQNKISQIIRQRMDEIQFEEVSLSLISHKE 88 Query: 79 LWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 LW + R+D +E+ +L D+ ++ EE+ + + ++SY+N P YQI K Sbjct: 89 LWKLTNRWDQ--EEIFKLV--GDEYLLVPTAEEEITNYVKKQFLESYKNFPLALYQINPK 144 Query: 139 FRDELRPRFGVMRSREFLMKDAYSF 163 FR+E RPR G++R +EFLMKDA F Sbjct: 145 FRNEKRPRGGLLRGKEFLMKDALFF 169 >gi|207744374|ref|YP_002260766.1| prolyl-trna synthetase (partial sequence ( central part) protein [Ralstonia solanacearum IPO1609] gi|206595779|emb|CAQ62706.1| prolyl-trna synthetase (partial sequence ( central part) protein [Ralstonia solanacearum IPO1609] Length = 328 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/80 (55%), Positives = 53/80 (66%) Query: 147 FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 G+MR REF MKDAYSFD EG K SY KMF +Y RIF R GL + A++G IGG Sbjct: 1 MGIMRGREFTMKDAYSFDRDVEGMKVSYQKMFDAYTRIFQRFGLAFRAVAADNGAIGGSG 60 Query: 207 SHEFIVLADTGETQVFCSKD 226 SHEF V+A+TGE + S + Sbjct: 61 SHEFHVIAETGEDAIVYSPE 80 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 45/93 (48%), Positives = 58/93 (62%), Gaps = 2/93 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K A RGIEVGH+F GT+YS MSATF +GK + Sbjct: 236 PEAEVADLRNVVEGDPSPDGKGSLAICRGIEVGHVFMLGTRYSESMSATFLDENGKTQPM 295 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 MG YGIG R++ A IE ++D +GIIWP S+A Sbjct: 296 VMGCYGIGITRILGAAIEQNYDARGIIWPVSIA 328 >gi|296241821|ref|YP_003649308.1| prolyl-tRNA synthetase [Thermosphaera aggregans DSM 11486] gi|296094405|gb|ADG90356.1| prolyl-tRNA synthetase [Thermosphaera aggregans DSM 11486] Length = 483 Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 92/393 (23%), Positives = 156/393 (39%), Gaps = 69/393 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLR 95 KG+ W+P G KAL I+ + TG E PT+ ++ + + +G E Sbjct: 39 KGMNVWMPYGLKALRLTQRILIQLLEETGHEEAYFPTMIPESVFSKEKDFLQGFGGETFV 98 Query: 96 L----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + R D+ + PT E VM ++ IK ++LP YQI FR E + ++R Sbjct: 99 VEGTATKRFDERLFVRPTSETVMYYMWNMWIKGRKDLPVKMYQIVNVFRYETKMTHPILR 158 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE + +A++ + E ++ + Y + F L L F Sbjct: 159 VREIMGFIEAHTAHASMEEAEAQIREALGIYKKFFDTLQLPY-----------------F 201 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 IV +T F ++ N DF + Sbjct: 202 IVKTPPWDT--FAGAEY--------NYDFITV---------------------------- 223 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +P+ K G+E+G + G ++S F DG + YV YG+ + R + AVI Sbjct: 224 MPDGK-----GLELGSVINLGQRFSRAFDIKFMDTDGVEKYVYQTCYGV-SERTLGAVIG 277 Query: 331 SSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQI 388 D KG+ +P +AP ++ ++ I K +Q D + L +G V D D+ Sbjct: 278 IHGDDKGLFFPPEIAPIQVVVVPIMKGVEQDVLDYSRNVEKHLKNLGVRVTVDMDLEHTP 337 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G ++ ++LG P ++ +G + S + V I R Sbjct: 338 GWKYYYWEMLGVPTRIEIGKREASTNTVTIARR 370 >gi|255035014|ref|YP_003085635.1| threonyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] gi|254947770|gb|ACT92470.1| threonyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] Length = 647 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 96/416 (23%), Positives = 171/416 (41%), Gaps = 65/416 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 +G+ WLP G + + A + + Q+R G + + P + S DL+V SG +D YGK+ + Sbjct: 266 QGLPLWLPKGAMLRERLQAFLSKAQSRAGYVPVITPHIGSKDLYVTSGHWDKYGKDSFQP 325 Query: 96 LADRN-DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + N D+ + P + +I+++ +SY++LP F + +R E G+ R R Sbjct: 326 IKTPNLDEEYMLKPMNCPHHCEIYKTSPRSYKDLPLRFSEFGTVYRYEQSGELHGLTRVR 385 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K + ++ L +F LG D S + I L Sbjct: 386 GFTQDDAHIF-CRPDQVKEEFIRVIDLVLYVFKSLGF-------------NDYSAQ-ISL 430 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + KD E W +A + E+ ++ E Sbjct: 431 RDPNNKEKYIGKD-----------------------EDWEKAESAIIEAAAERGLSTVTE 467 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y LP + G+D + H V + Sbjct: 468 LGEAAFYGPKLDFMVRDALGRKWQLGTIQVDYQLPQRFQLEYTGSDNQKHRPVMIHRAPF 527 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+M A++ + G+ +W PD +A IS + D E+++ +L Sbjct: 528 GSMERFTAILIENTAGQFPLWLSPDQIAILPIS--------EKFADYAEEVFFQLQDHDI 579 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 F D E+IG + A++ P +IVG K ++ K+ ++ + G M++EE Sbjct: 580 RGFVDHRDEKIGRKIRDAEVTKVPFMLIVGEKEAAEGKLSVRRKGEGDLGSMTIEE 635 >gi|225679653|gb|EEH17937.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03] Length = 551 Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 27/188 (14%) Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSAT-------FKGADGKDHY------------VQ 313 EN + IE+ H F+ GT+YS ++A+ +G+ + ++ Sbjct: 360 ENSVETHTAIELAHTFHLGTRYSEVLNASVAIPSSILRGSLTTERTALAQSSSTVSVPLE 419 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL- 372 MG +GIG R++AAV ++ D KG+ WP ++PF + +I+ D+ E++Y L Sbjct: 420 MGCHGIGVSRMIAAVADTLADPKGLNWPRVISPFDVIIIS----DRELEKEAEQVYDTLM 475 Query: 373 --SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDM 429 K D DD + + + ADL+G+P+ +++G + DSK+EI+ RL RE + Sbjct: 476 ESRKADVDAIIDDREKSLAWKLRDADLIGYPVIIVIGKLWKRDSKLEIQCRRLENFRETV 535 Query: 430 SLEEVINY 437 SL+++ Y Sbjct: 536 SLQDLRFY 543 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/88 (48%), Positives = 59/88 (67%), Gaps = 1/88 (1%) Query: 138 KFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 K+RDE RPR G++R REF+MKD Y+FD + E + +YN + +Y+R+F+ L L I A Sbjct: 85 KYRDEPRPRQGLLRGREFMMKDLYTFDYSAEKAIETYNAVKEAYIRLFNELKLPYIVAAA 144 Query: 198 ESGPIGGDLSHEFIVLADTGE-TQVFCS 224 +SG +GG LSHEF + GE T V CS Sbjct: 145 DSGNMGGSLSHEFHLPNSKGEDTIVSCS 172 >gi|167752344|ref|ZP_02424471.1| hypothetical protein ALIPUT_00588 [Alistipes putredinis DSM 17216] gi|167660585|gb|EDS04715.1| hypothetical protein ALIPUT_00588 [Alistipes putredinis DSM 17216] Length = 651 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 103/433 (23%), Positives = 165/433 (38%), Gaps = 69/433 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G D + +R Q G ++ P + + +L+V SG Y YGK+ + Sbjct: 260 QGLPLWLPKGAALRDRLEQFLRGVQKEYGYQQVITPHIGNKELYVTSGHYAKYGKDSFQP 319 Query: 97 ADR--NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + + P + +I+RS +SY+ LP + +R E G+ R R Sbjct: 320 IHTPIEGEEYLLKPMNCPHHCEIYRSKPRSYKELPVRLAEFGTVYRYEQSGELHGLTRVR 379 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + P+ + K+ L IF L + + I L Sbjct: 380 GFTQDDAHMF-VRPDQLLEEFEKVIDIVLYIFKTLKFDNYTAQ--------------ISL 424 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W +A EK +++ E Sbjct: 425 RDPNNKEKYIGSD-----------------------ENWEKAESAIIQAAKEKGLNTVIE 461 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP T+KGAD K H + + Sbjct: 462 YGEAAFYGPKLDFMVRDAIGRKWQLGTIQVDYNLPERFDLTYKGADDKMHRPIMIHRAPF 521 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+M AV+ GK +W PD V IS + D EK+ A L+K Sbjct: 522 GSMERFVAVLLEHTGGKFPLWLSPDQVVVLPIS--------EKFNDYAEKVSAYLNKYDI 573 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DD E+IG + +L P +IVG K ++ V ++ + G + M+LE +Y Sbjct: 574 RSQVDDRNEKIGRKIRDNELKRIPYLLIVGEKEEAEGLVSVRAQGEGDKGQMTLEAFRDY 633 Query: 438 ----ASHRFSNNR 446 SH N+ Sbjct: 634 MTDLVSHEIDANK 646 >gi|226324133|ref|ZP_03799651.1| hypothetical protein COPCOM_01911 [Coprococcus comes ATCC 27758] gi|225207682|gb|EEG90036.1| hypothetical protein COPCOM_01911 [Coprococcus comes ATCC 27758] Length = 481 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 97/444 (21%), Positives = 182/444 (40%), Gaps = 75/444 (16%) Query: 1 MRRSKYFLPILQENPRDAEIAS-HKLMLRTGMIHQHS--KGIYSWLPLGQKALDNVNAII 57 M + K F+ + RD + A + ++R + +S KG ++LP G + + A + Sbjct: 1 MAKEKKFVQAI--TSRDEDFAQWYTDVVREAKLCDYSSVKGCLNYLPNGYAIWEKIQADL 58 Query: 58 REEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLRLA----DRNDKAMIYGPTHEE 112 + TG + +P L +L ES + + E+ + + + M PT E Sbjct: 59 DKRFKETGVENVYLPMLIPENLLQKESDHIEGFAPEVAWVTKGGLETLQEPMCIRPTSET 118 Query: 113 VMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGS 170 + D++ ++SYR+LP + Q L++ RP +RSREFL ++ ++ T E + Sbjct: 119 LFCDLWARTVQSYRDLPKVWNQWCSVLRWEKTTRP---FLRSREFLWQEGHTIHATYEEA 175 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + M LR++ L S+ + SGP S +F DT Sbjct: 176 EQRTLTM----LRVYQELIRDSLAIPFVSGP--KTESEKFAGAQDT-------------- 215 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 Y + +H+ K S + +F Sbjct: 216 -------------------------YTVEALMHDGKALQSATSH--------------FF 236 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 G + + + + H V S+G+ + R++ A+I D G++ P +AP + Sbjct: 237 GNAFPDAFDIKYLDKNNELHSVYETSWGL-STRIIGALIMVHGDDSGLVLPPRIAPVQTR 295 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 +I I H + + ++ RL K G V DD + G +F+ ++LG P ++ +G K Sbjct: 296 VIPIAQHKEGVLEKANELTERLKKAGYSVKIDDSEKSPGWKFSEQEMLGIPTRIEIGPKD 355 Query: 411 VSDSKVEIKHRLTGIREDMSLEEV 434 + ++V + R T + +SL+E+ Sbjct: 356 IEQNQVVVVRRDTREKIVVSLDEI 379 >gi|268610123|ref|ZP_06143850.1| prolyl-tRNA synthetase [Ruminococcus flavefaciens FD-1] Length = 480 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 91/417 (21%), Positives = 162/417 (38%), Gaps = 78/417 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEML- 94 KG P G +N+ I+ TG + +P + + L E + + E+ Sbjct: 38 KGCMVIRPYGYAIWENIQRILDTTFKETGHENVCMPMFIPESLLQKEKDHVEGFAPEVAW 97 Query: 95 -------RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRP 145 +L DR + PT E + + + + I SYR+LP + Q +++ RP Sbjct: 98 VTHGGNEKLEDR----LCVRPTSETLFCEHYSNIIHSYRDLPKLYNQWVSVVRWEKTTRP 153 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 +RSREFL ++ ++ T E + +M Y Sbjct: 154 ---FLRSREFLWQEGHTIHATAEEAIEETERMLNVY------------------------ 186 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 AD FC K + + T+ D S YA + +H+ Sbjct: 187 --------AD------FCEKSLAMPVVKGKKTESDKFAGAVST-------YAIEALMHD- 224 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 + ++ G YFG ++ + + K S+G+ R++ Sbjct: 225 -------------GKALQAGTSHYFGDGFAKAFGIEYTDKENKRVNPHQTSWGV-TTRLI 270 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 AVI + D G++ P +VAP ++ ++ I H + D ++ RL K G V DD Sbjct: 271 GAVIMTHGDNSGLVLPPAVAPVQVVIVPIAQHKEGVLDKANELLERLKKAGVRVKLDDTD 330 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G +FA ++ G PL+V +G + + ++K I R G + D SL+E+ + + + Sbjct: 331 NSPGWKFAEYEMKGVPLRVEIGPRDIEENKCIIASRWNGEKADFSLDELESAVAQKL 387 >gi|282555147|gb|ADA82668.1| ProS [Candidatus Blochmannia vafer] Length = 77 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 37/77 (48%), Positives = 53/77 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P++ E SH+LMLR+GMI Q S G+Y+WLP+G + L V I+R+E Sbjct: 1 MRATQYLLTTLKEIPKNCETISHQLMLRSGMIRQISTGLYTWLPIGLRVLRKVENIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSA 77 N IE+S+P +Q A Sbjct: 61 MNNISFIEISMPIIQPA 77 >gi|226291392|gb|EEH46820.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18] Length = 583 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 27/188 (14%) Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSAT-------FKGADGKDHY------------VQ 313 EN + IE+ H F+ GT+YS ++A+ +G+ + ++ Sbjct: 392 ENSVETHTAIELAHTFHLGTRYSDVLNASVAIPSSILRGSLTTERTALAQSSSTVSVPLE 451 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL- 372 MG +GIG R++AAV ++ D KG+ WP ++PF + +I+ D+ E++Y L Sbjct: 452 MGCHGIGVSRMIAAVADTLADPKGLNWPRVISPFDVIIIS----DRELEKEAEQVYDTLM 507 Query: 373 --SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK-HRLTGIREDM 429 K D DD + + + ADL+G+P+ +++G + DSK+EI+ RL RE + Sbjct: 508 ESRKADVDAIIDDREKSLTWKLRDADLIGYPVIIVIGKLWKRDSKLEIQCRRLENFRETV 567 Query: 430 SLEEVINY 437 SL+++ Y Sbjct: 568 SLQDLRFY 575 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 40/188 (21%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G++ LPLG + + + +I + GA ++S+ ++ S LW +SGR E + Sbjct: 56 GVFHLLPLGLRVQEKLERLIDKHMRTLGASKLSLSSISSQALWEKSGRLKK-DSEFFKFE 114 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLM 157 DR + + PTHEE +T + S Sbjct: 115 DRKEARFLLAPTHEEEITSLVAS------------------------------------- 137 Query: 158 KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG 217 A + + + +YN + +Y+R+F L L I A+SG +GG LSHEF + G Sbjct: 138 -SAGNIGMNQGLDRETYNAVKEAYIRLFDELKLPYIVAAADSGNMGGSLSHEFHLPNSKG 196 Query: 218 E-TQVFCS 224 E T V CS Sbjct: 197 EDTIVSCS 204 >gi|91772258|ref|YP_564950.1| prolyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] gi|121689406|sp|Q12ZC6|SYP_METBU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91711273|gb|ABE51200.1| Prolyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] Length = 478 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 86/413 (20%), Positives = 164/413 (39%), Gaps = 69/413 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG Y W P G NV IIR ++ + + + E+ + +E+ + Sbjct: 37 KGSYVWYPFGFSIRRNVYDIIRGLLDKDHQETLFPLLIPENEFMKEAEHIKGFEEEVYWV 96 Query: 97 ADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 + D + PT E + ++R ++S+ +LP YQI FR E + ++R Sbjct: 97 LNGGTTPLDVKLALRPTSETAIYPMYRLWVRSHADLPLKLYQIVNTFRYETKHTRPLIRL 156 Query: 153 REFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE K+A++ T + + + Y+ + RL +IP+ Sbjct: 157 REITSFKEAHTVHATWDEAASQVEEAIRLYIEFYKRL---AIPV---------------- 197 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +PS+ +D + + DSL Sbjct: 198 --------------------LPSKRPSWDKFPGADYTI-----------------AVDSL 220 Query: 272 -PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 P+ K ++VG + G ++ ++ DG+ Y YG+ + R +A ++ Sbjct: 221 MPDGKT-----LQVGTAHHLGDNFAKTFDIKYEDVDGEQVYAHQTCYGV-SERCIATLLS 274 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + D KG++ P VAP ++ +I I + + +AC + A L G V DD ++ G Sbjct: 275 THGDDKGLVLPPEVAPTQVVIIPIIFKEPEAVLNACNDVKAELEAAGVRVTIDDSDKRPG 334 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 S++ ++ G PL++ +G + + + + R TG +E + L + + RF Sbjct: 335 SKYYKWEMKGVPLRIEIGPRDLKNEAAMLARRDTGEKEQVPLASIKDEVLSRF 387 >gi|194246927|emb|CAQ76828.1| prolyl-tRNA synthetase [Campylobacter concisus] Length = 221 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/98 (43%), Positives = 57/98 (58%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++GIEVGHIF G KYS M+AT+ +GK MG YGIG R++A +IE+SHD KG Sbjct: 119 SKGIEVGHIFQLGDKYSAAMNATYLDENGKAKPFLMGCYGIGISRLIAVMIEASHDEKGC 178 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 IW APF + +I D+ ++Y L K G Sbjct: 179 IWKKECAPFDVEIIISNLKDEAGVKFAFELYESLKKAG 216 >gi|322711570|gb|EFZ03143.1| prolyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23] Length = 578 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 2/140 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +E+GH FY G++YS P + + K V+MG YGIG R+ AV E D +G+ Sbjct: 255 RALELGHTFYLGSRYSKPFELSVTLPNSKAPVPVEMGCYGIGVSRIFGAVAEHKADERGL 314 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK-VGCDVFWDDMGEQIGSQFAVADL 397 WP ++APF+I +I + + +K+ + S G D DD E G + AD+ Sbjct: 315 NWPRAIAPFEIVVIPTSGVNSQTLEFHDKLTSWSSTGPGFDAVLDDRKETFGWKMQDADM 374 Query: 398 LGFPLQVIVGSKFVSDSKVE 417 G+P+ +++G + K++ Sbjct: 375 TGYPVTIVLGKAWRERGKLQ 394 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 48/80 (60%) Query: 143 LRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPI 202 +RPR G++RSREF+MKD Y+FD + E + +Y + +Y F + + + A SG + Sbjct: 1 MRPRHGLLRSREFIMKDLYTFDTSFESAIETYKCVSKAYRAFFADMKIPILVAEASSGDM 60 Query: 203 GGDLSHEFIVLADTGETQVF 222 GGD SHE+ + GE +V Sbjct: 61 GGDYSHEYHLAHPIGEDRVI 80 >gi|171185819|ref|YP_001794738.1| prolyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] gi|259511627|sp|B1Y963|SYP_THENV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|170935031|gb|ACB40292.1| prolyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] Length = 487 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 91/408 (22%), Positives = 159/408 (38%), Gaps = 69/408 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG Y W P G K NV +IR + TG E+ P + + ES + KE+ Sbjct: 39 KGAYVWRPYGMKLRRNVEELIRRVHDETGHEEVLFPVFIPYEFFGKESQHIRGFEKEVFW 98 Query: 96 LADRND--KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 ++ + + ++ PT E + + + I+ Y++LP YQI FR E + ++R R Sbjct: 99 VSKGGEGGERLVLRPTSETAIMPMVKLWIQDYKDLPLRLYQIVSVFRAETKMTHPMIRLR 158 Query: 154 EFLM-KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 E M K+A++ + E ++ + Y RIF + L + Sbjct: 159 EISMFKEAHTVHVDREDAERQVREAVEIYKRIFDEMCLAYM------------------- 199 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 + D+ F FD ++ ++ TA Y T+ Sbjct: 200 --------INKRPDWDKFAGAEYTIAFDTVLPDGRTLQIGTAHYLGTN------------ 239 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 ++ T+ ADG SYGI + A +I Sbjct: 240 ---------------------FTRVFEVTYLDADGTRKLAHTTSYGISERSIAAMLITHG 278 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQ---VCRDACEKIYARLSKVGCDVFWDDMGEQI- 388 DG G P +AP +I+++ I D+ + E++ A L G + DD ++ Sbjct: 279 DDG-GTTLPPKLAPIQIAVVPIYYSDEEMPLVMKFVEEVVAALKGAGLRLHVDDRRDKTP 337 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G +F +L G PL++ VG + V +V + R T + ++L E+++ Sbjct: 338 GWKFYYWELKGVPLRLEVGKRDVEKRQVVVTRRDTLEKYAVALGELVD 385 >gi|325958767|ref|YP_004290233.1| prolyl-tRNA synthetase [Methanobacterium sp. AL-21] gi|325330199|gb|ADZ09261.1| Prolyl-tRNA synthetase [Methanobacterium sp. AL-21] Length = 469 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 89/410 (21%), Positives = 169/410 (41%), Gaps = 77/410 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-LWVESGRYDSYGKEMLR 95 KG++ WLP G K + I++ ++ E+ P L D L E+ + +E+ Sbjct: 25 KGMHVWLPQGFKIRKHTLEILKTILDKDHE-EVMFPLLIPEDELAKEAIHVKGFEEEVYW 83 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + +K + PT E M +F ++++ +LP +YQ+ FR E + ++R Sbjct: 84 VTHGGLTELNKKLALRPTSETAMYPMFSLWVRNHSDLPMRYYQVVNTFRYETKHTRPLIR 143 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE K+A++ + E ++ + Y + F LG IP P Sbjct: 144 VREITTFKEAHTVHSSAEETEEQVKEALRIYRQFFDSLG---IPYTVSKRP--------- 191 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ FP FD + Sbjct: 192 ---------------EWDKFPGALYTMAFDTL---------------------------- 208 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 LP+ K +++G + G ++ T++ A+G YV YG+ RV+A++I Sbjct: 209 LPDGKT-----LQIGTVHNLGQTFAKTFDITYETAEGNHEYVYQTCYGLSD-RVIASLIG 262 Query: 331 SSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARL-SKVGCDVFWDDMGEQ 387 D G+ P VAP+ + ++ I K +V D C+K+ +L S++ V++DD + Sbjct: 263 IHGDDSGLCLPPDVAPYHVVIVPIIFKKGGEVVIDFCKKLQEKLESELNLRVYFDDRDIR 322 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G ++ ++ G PL++ VG + + + H++ R + +E+I+Y Sbjct: 323 AGKKYYEWEMRGIPLRLEVGPRDIEN------HKIVTFRRESKEKEIIDY 366 >gi|256422752|ref|YP_003123405.1| threonyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] gi|256037660|gb|ACU61204.1| threonyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] Length = 646 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 166/427 (38%), Gaps = 61/427 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ WLP G + + + +++ Q +G + + P + + +L++ SG Y+ YGK+ + Sbjct: 262 GLPLWLPKGAMLRERLQSFLQKAQIESGYMPVVTPHIGNKNLYITSGHYEKYGKDSFQPI 321 Query: 97 -ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + P + +I++S KSY++LP F + +R E G+ R R Sbjct: 322 HTPEEGEEFMLKPMNCPHHCEIYKSSPKSYKDLPVRFAEFGTVYRYEQHGELHGLTRVRG 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F P+ K + K+ L +F L Sbjct: 382 FTQDDAHLF-CRPDQVKEEFCKVIDLVLYVFQSL-------------------------- 414 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 +F D+ D +D E W A + EK ++ E Sbjct: 415 -----------NFTDYTAQISLRDQEDRAKYIGSDENWNLAEQAIIESAAEKGLKTVVEY 463 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 + G + +G + GT Y+LP + GAD + H V + G Sbjct: 464 GEAAFYGPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYVGADNQKHRPVMIHRAPFG 523 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ AV+ GK +W + P ++ ++ I +Q + EK+ L V Sbjct: 524 SLERFIAVLIEHCGGKFPLW---LTPTQVKILPISDKNQ---EYAEKVAELLKNVEIRAE 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 DD E+IG + +L P +++G K ++SKV ++ + G M +++ I Sbjct: 578 IDDRSEKIGKKIRETELAKIPYMLVIGEKEAAESKVAVRRQAKGDLGAMDIDQFIALVKE 637 Query: 441 RFSNNRP 447 + +P Sbjct: 638 EVVSRKP 644 >gi|320100286|ref|YP_004175878.1| prolyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162] gi|319752638|gb|ADV64396.1| prolyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162] Length = 480 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 98/425 (23%), Positives = 169/425 (39%), Gaps = 73/425 (17%) Query: 23 HKLMLRTGMI--HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 H ++ G+I KG+ W+P G KAL I+ + TG E PT+ ++ Sbjct: 20 HSVLKEAGIIDIRYPVKGMNVWMPYGLKALRLTQRILMDLLEETGHQEAYFPTMVPESVF 79 Query: 81 V-ESGRYDSYGKEML----RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 E +G E + + ++ + PT E VM ++ IK ++LP YQ+ Sbjct: 80 SREKDFLKGFGGETFVVEGTVTRKFNERLFVRPTSETVMYYMWNMWIKGRKDLPLKMYQV 139 Query: 136 QLKFRDELRPRFGVMRSREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 FR E + ++R RE + +A++ T E ++ ++ Y F+RL L Sbjct: 140 VNVFRYETKMTHPILRVREIMGFIEAHTAHATMEEAEKQISEAIAIYKEFFNRLQLPY-- 197 Query: 195 MRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 FIV +T F ++ N DF + Sbjct: 198 ---------------FIVKTPPWDT--FAGAEY--------NYDFITV------------ 220 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 +P+ K G+E+G + G K++ + DG + +V Sbjct: 221 ----------------MPDGK-----GLELGSVINLGQKFAKAFEIKYMDTDGVEKHVYQ 259 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARL 372 YG+ + RV+ AVI D G+ +P +AP ++ ++ + +QV A K+ L Sbjct: 260 TCYGV-SERVLGAVIGIHGDETGLFFPPDIAPIQVVIVPVMKPGENQVLEYAF-KVSNIL 317 Query: 373 SKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 G VF D D G ++ ++ G P ++ VG K + S V I R + + L Sbjct: 318 KAHGVRVFVDTDQEHTPGWKYYYWEMKGVPTRIEVGRKELDASTVTIARRDKREKHVVKL 377 Query: 432 EEVIN 436 EE ++ Sbjct: 378 EEAVD 382 >gi|288932452|ref|YP_003436512.1| prolyl-tRNA synthetase [Ferroglobus placidus DSM 10642] gi|288894700|gb|ADC66237.1| prolyl-tRNA synthetase [Ferroglobus placidus DSM 10642] Length = 475 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 95/406 (23%), Positives = 165/406 (40%), Gaps = 70/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+Y W P G K V +RE +R E+ PTL +L ES + E+ Sbjct: 29 KGLYVWFPFGFKIRRLVYDKLREIMDRDHE-EVYFPTLIPETELGKESEHIKGFEDEVFW 87 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + ++ D + PT E M +F+ I+S+ +LP YQI FR E + ++R Sbjct: 88 VTHGGLEKLDVKLALRPTSETAMYPMFKLWIRSHADLPLRVYQIVNVFRYETKHTRPLIR 147 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE K+A++ E ++ + Y + L + + +R Sbjct: 148 LREITSFKEAHTAHRNYEEAEENVRLAVSLYKEFYDFLAIPYLILR-------------- 193 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ FP FD ++ ++ T VH+ L D+ Sbjct: 194 -------------RPEWDKFPGADYTIAFDTVMPDGRTMQIGT--------VHH--LADN 230 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 + F KY P DG YV YGI + R +AA+I Sbjct: 231 FAKT---------------FDIKYETP--------DGDHAYVHQTCYGI-SERCIAALIS 266 Query: 331 SSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 D G++ P V+P +I +I I K ++ D +++Y +L G V DD E+ Sbjct: 267 IHGDDLGLVLPFEVSPVQIVIIPILYKGKEEEVMDLSKRVYEKLKGYGFRVVLDDTDERP 326 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G+++ +L G P+++ +G K ++ + R +++ +S+EE+ Sbjct: 327 GAKYYKWELKGVPIRIEIGPKEAERNEAVVSFRDEKVKKSLSVEEL 372 >gi|313674626|ref|YP_004052622.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Marivirga tractuosa DSM 4126] gi|312941324|gb|ADR20514.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Marivirga tractuosa DSM 4126] Length = 654 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 99/428 (23%), Positives = 174/428 (40%), Gaps = 62/428 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G D + +++ Q + G + P + + +L++ SG Y+ YGK+ R Sbjct: 265 GLPLWLPKGTMLRDRLENFLKKAQVKAGYQPVITPHIGNKELYITSGHYEKYGKDSFRPI 324 Query: 98 -------DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 ++D+ + P + +I+++ +SY++LP + +R E G+ Sbjct: 325 AAPSDDDSKSDEEYLLKPMNCPHHCEIYKTKPRSYKDLPLRLAEFGTVYRYEQSGELHGL 384 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK----SIPMRAESGP---I 202 R R F DA+ F P+ K + K+ L +F+ LG + + +R I Sbjct: 385 TRVRSFTQDDAHIF-CRPDQVKEEFIKVIDLVLFVFNSLGFEDFVTQVSLRDPDNREKYI 443 Query: 203 GGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDV 262 GGD + D E + + +E +I L A Y D Sbjct: 444 GGD------EVWDKAEKSIIEA---------AEEKGLKTVIELGE-----AAFYGPKLDF 483 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + D+L R ++G I Y+LP + GAD H V + Sbjct: 484 M---VKDAL-------GRSWQLGTI---QVDYNLPERFKLEYVGADNSKHRPVMIHRAPF 530 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+M AV+ G +W P+ VA IS + D K+Y+ L Sbjct: 531 GSMERFVAVLIEHCAGNFPLWLSPEQVAVLPIS--------EKYADYANKVYSELEANDI 582 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 F D E+IG + A++ P +IVG + ++ KV I+ G +MSLE+ ++ Sbjct: 583 TGFIDHRDEKIGRKIRDAEINKIPYMLIVGEQEAAEEKVSIRKHGEGDVGNMSLEDFKSF 642 Query: 438 ASHRFSNN 445 + + +++ Sbjct: 643 FNQKVTDS 650 >gi|124507052|ref|XP_001352123.1| prolyl-t-RNA synthase, putative [Plasmodium falciparum 3D7] gi|23505153|emb|CAD51934.1| prolyl-t-RNA synthase, putative [Plasmodium falciparum 3D7] Length = 579 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 24/234 (10%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 F I +N + + +L+ R I + GIY+ LPLG + ++ + + + + + Sbjct: 65 FNRIFNDNIKSNGDKTSELLQRANYI-RDVNGIYNILPLGFRVINKIIDFLNKHLEKLNS 123 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRL----ADRNDKA-------------MIYGPT 109 MS+ LQ+ LW S R Y E L + +NDK+ I PT Sbjct: 124 HAMSLSILQAKKLWNISDRSKLYSDEFLYVYKQKQSKNDKSSEESLKKKIEDDGYILSPT 183 Query: 110 HEE----VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDL 165 EE ++ I+ +I + + LP +Q KFR+E R + +S+EFLMKD YSF Sbjct: 184 CEESSLSLINQIYNENI-TIKCLPLLIHQYNYKFRNEKRFEKSLFKSKEFLMKDGYSFHS 242 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGE 218 + +Y K Y IF L L +I + + + SHEF VL+ G+ Sbjct: 243 NEKCLNETYEKYKECYKNIFEELKLSFNIIKKRKKDKMNALESHEFQVLSRDGK 296 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 38/70 (54%) Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 E HIF G YS + + + + MGSYGIG R++ +IE+ +D +GI P Sbjct: 299 EAAHIFKLGDYYSNKLDIKYLDKKNEKKNILMGSYGIGIYRLLYFLIENFYDEEGIKLPQ 358 Query: 343 SVAPFKISLI 352 VAPF + LI Sbjct: 359 QVAPFSVYLI 368 >gi|282555140|gb|ADA82663.1| ProS [Candidatus Blochmannia sayi] Length = 76 Score = 83.6 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 36/75 (48%), Positives = 51/75 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P++ SH+LMLR G+I Q S G+Y+WLP G + L + IIREE Sbjct: 1 MRISQYLLATLKETPKNCTTISHQLMLRAGLIRQVSSGLYTWLPTGLRVLRKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQ 75 ++ AIE+S+P +Q Sbjct: 61 MSKINAIEISMPIVQ 75 >gi|307595133|ref|YP_003901450.1| prolyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] gi|307550334|gb|ADN50399.1| prolyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] Length = 489 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 93/394 (23%), Positives = 157/394 (39%), Gaps = 68/394 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG Y W P G + V + +R + TG E+ P + + ES + E+ Sbjct: 42 KGAYVWRPYGMRIRRLVESYVRLVHDETGHQEVLFPVFIPYEFFSKESEHIRGFENEVFW 101 Query: 96 LAD--RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 ++ ++ ++ PT E M +F+ IK + +LPF YQI FR E + ++R R Sbjct: 102 VSKGGTGEERLVLRPTSETAMMPMFKLWIKDHTDLPFKVYQIVSVFRAETKATRPMIRLR 161 Query: 154 EFLM-KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 E M K+A++ E ++ + Y +IF L SIP P + Sbjct: 162 EISMFKEAHTAHANREDAERQIKEAMEIYKKIFDYL---SIPYLISQRPEWDKFAGAVYT 218 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 +A FD ++ ++ T Y T + ++FD Sbjct: 219 IA------------------------FDTVMPDGKTMQIGTVHYLGT---NFSRVFD--- 248 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 +Y P G YV SYGI RV+AA+I Sbjct: 249 -------------------VRYLTP--------SGDWEYVHTTSYGISE-RVIAAMIAVH 280 Query: 333 HDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-G 389 D KG+ P +VAP ++ ++ I K ++ + I L+ G V DD ++ G Sbjct: 281 GDDKGLALPPNVAPIQVVIVPIMYKGTEEAIMREVKSITEELTNAGIRVKVDDRTDKTPG 340 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +++G PL++ +G K V + +V + R T Sbjct: 341 WKYNYWEMMGVPLRIEIGPKDVENRQVVLARRDT 374 >gi|282555151|gb|ADA82671.1| ProS [endosymbiont of Camponotus pudorosus] Length = 77 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 36/77 (46%), Positives = 50/77 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P+ E SH+LMLR+GMI Q S G+Y+WLP+G + L V I+R+ Sbjct: 1 MRATQYLLTTLKEKPKSCETISHQLMLRSGMIRQISSGLYTWLPIGLRVLRKVENIVRDA 60 Query: 61 QNRTGAIEMSVPTLQSA 77 N G IE+ +P Q A Sbjct: 61 MNNIGFIEILMPMTQPA 77 >gi|317054829|ref|YP_004103296.1| prolyl-tRNA synthetase [Ruminococcus albus 7] gi|315447098|gb|ADU20662.1| prolyl-tRNA synthetase [Ruminococcus albus 7] Length = 480 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/417 (19%), Positives = 161/417 (38%), Gaps = 70/417 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ I+ G + +P + + L E + + E+ Sbjct: 38 KGCMVIRPYGYAIWENIQKILDSRFKALGHENVCMPMFIPESLLQKEKDHVEGFAPEVAW 97 Query: 96 L----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + +++ + + PT E + + + + + SYR+LP + Q +++ RP Sbjct: 98 VTHGGSEKLEDRLCVRPTSETLFCEHYANIVHSYRDLPKLYNQWVSVVRWEKTTRP---F 154 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +RSREFL ++ ++ TPE + +M Y Sbjct: 155 LRSREFLWQEGHTIHETPEEAIEETERMLNCY---------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 AD FC KD + TD D A YA + +H+ Sbjct: 187 ----AD------FCEKDLAMPVVKGRKTDSDKFAGAE-------ATYAIEALMHD----- 224 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 + ++ G YFG ++ F G D K + S+G+ R++ A+I Sbjct: 225 ---------GKALQAGTSHYFGDGFAKAFGIQFTGRDNKLAFPHQTSWGV-TTRLIGAII 274 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + D G++ P +VAP + ++ ++ + + ++Y +L G V DD + G Sbjct: 275 MTHGDDNGLVLPPAVAPIQAVIVPVQQFKEGVLEKANEVYEQLKAAGIRVKLDDSDQSPG 334 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +FA ++ G P+++ +G K + + + I R + L E++ + + R Sbjct: 335 WKFAEYEMKGVPVRIELGPKDIENGQCVIVTRHDREKTFTPLTELVETVNAKLEAVR 391 >gi|325279133|ref|YP_004251675.1| threonyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] gi|324310942|gb|ADY31495.1| threonyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] Length = 650 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 94/418 (22%), Positives = 159/418 (38%), Gaps = 65/418 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ WLP G D + +R+ Q + G ++ P + + +L+ SG Y YGK+ ++ Sbjct: 263 GLPMWLPKGAMLRDRLEGFLRKVQKKYGYQQVITPHIGNVNLYKTSGHYQKYGKDSFQVI 322 Query: 97 -ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + + P + +I++ +SY++LP F + +R E G+ R R Sbjct: 323 TTPQEGEEFMLKPMNCPHHCEIYKFKPRSYKDLPLRFAEFGTVYRYEQSGELHGLTRVRG 382 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F TP+ K + K+ IF L K + + L Sbjct: 383 FTQDDAHLF-CTPDQLKEEFKKVIDIIFTIFKALDFKDFTAQ--------------VSLR 427 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D T+ + D E W A + EK + E Sbjct: 428 DPKNTEKYIGTD-----------------------ENWEKAERAIIEAAEEKGLKTTVEL 464 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 + G + +G + GT Y+LP + GAD H V + G Sbjct: 465 GEAAFYGPKLDFMVKDAIGRKWQLGTIQVDYNLPERFDLEYTGADNLKHRPVMIHRAPFG 524 Query: 321 AMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +M AV+ GK +W PD V IS + D +K+ L+ Sbjct: 525 SMERFVAVLIEHTGGKFPLWLAPDQVVVMPIS--------EKFNDYAQKLSDLLNNSDIR 576 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DD E+IG + +L P +IVG ++++ V ++ + G MS+E+ I+ Sbjct: 577 TVLDDRNEKIGRKIRDNELKKIPYLLIVGENEMNNNTVSVRRQGQGDMGTMSVEDFIS 634 >gi|261416474|ref|YP_003250157.1| threonyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372930|gb|ACX75675.1| threonyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 695 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 95/417 (22%), Positives = 172/417 (41%), Gaps = 50/417 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I HS G+ W P G K ++ + IR + +R G +E+ P + + LW++SG D Y + Sbjct: 315 IEDHSPGMVFWHPKGTKMVNALKDYIRGKIDRRGYLEVITPEIVNKTLWIKSGHADKYNE 374 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + D M P + IF + ++S+R+LP + R E G+M Sbjct: 375 NMFKTL-AGDVEMAVKPMNCPCHIQIFNTGLRSWRDLPMRLAEFGKCHRYEPAGTMHGLM 433 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP---IGGDL 206 R R F+ DA+ F E S F + ++ I+H G I ++ + P +G D Sbjct: 434 RVRGFVQDDAHIF--CTEDQIASEVADFCALVKEIYHDFGFDDIVVKFSTRPEKRVGSD- 490 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + D E + +E T + L+ I+ + + K Sbjct: 491 -----EIWDKAEAAL------------AEAT---KLAGLDYILNPGEGAF------YGPK 524 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMR 323 L +L K R + G I ++LP + A + G D + H V + +G++ Sbjct: 525 LEFTL---KDSLGRDWQCGTI---QVDFNLPQRLGAEYVGKDNQKHIPVMLHRAAVGSIE 578 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +W +AP + ++ I + D +++ L G V D+ Sbjct: 579 RFLGILIEEFMGDFPLW---LAPVQARVLPIS---EKFVDYAKQVEKELVNAGVRVEVDE 632 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 E++G + +L P +IVG K V+D V ++ R G + M++ + + + Sbjct: 633 SNEKLGYKIRQCELQKVPYLLIVGEKEVADGVVSVRKRKDGDKGSMTVAQFLEMTAE 689 >gi|229916382|ref|YP_002885028.1| threonyl-tRNA synthetase [Exiguobacterium sp. AT1b] gi|259516484|sp|C4L461|SYT_EXISA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229467811|gb|ACQ69583.1| threonyl-tRNA synthetase [Exiguobacterium sp. AT1b] Length = 647 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 94/413 (22%), Positives = 176/413 (42%), Gaps = 39/413 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G V I +++ G + P L S DL+ SG +D Y +M Sbjct: 266 QGLPMWLPKGASIRRTVERYIVDKELELGYQHVYTPVLGSVDLYKTSGHWDHYQDDMFPK 325 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I++ +SYR LP ++ R E+ G+ R R Sbjct: 326 MEMDNEELVLRPMNCPHHMTIYKHEPRSYRELPLRIAELGGMHRYEMSGALTGLQRVRYM 385 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 ++ D ++F +TPE K + + ++ G+K R + P + + + Sbjct: 386 VLNDGHTF-VTPEQMKQEFKDIVHLIQEVYADFGIKDYRFRLSYRDPADKEKYFDNDAIW 444 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + ++Q+ + D ++ P F+ E A Y DV ++ +L + Sbjct: 445 EMAQSQLKETMDELELPY------FE--------AEGEAAFYGPKLDV---QVRTALGKE 487 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGKDH + G+ + R VA +IE Sbjct: 488 ETLSTVQLD----FLLPERFDL----TYTGPDGKDHRPIVLHRGVVSTMERFVAYLIEEY 539 Query: 333 HDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 KG +P +AP ++ LI + HD+ + + A L K G V D E++G + Sbjct: 540 ---KG-AFPTWLAPVQVKLIPVSHVHDEYVAE----VKAELVKRGVRVETDLRDEKLGYK 591 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 A + P+ +++G K + V I+ + SL+E I + +N Sbjct: 592 IREAQMKKIPMTLVLGDKERDERAVNIRRYGQQEQVSASLDEFIASLTDEIAN 644 >gi|291522045|emb|CBK80338.1| prolyl-tRNA synthetase, family I [Coprococcus catus GD/7] Length = 477 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 93/418 (22%), Positives = 168/418 (40%), Gaps = 73/418 (17%) Query: 25 LMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVE 82 ++++ G+I S KG + P G +N+ + + TG + +P + + L E Sbjct: 25 VVVKAGLIGYTSVKGCMAIKPAGYAIWENIQHELDKRFKATGVENVYMPMFIPESLLQKE 84 Query: 83 SGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ-- 136 + + E+ + + + M PT E + D + I+SYR+LP + Q Sbjct: 85 KDHVEGFAPEVAWVTHGGLNELQERMCVRPTSETLFCDFYAKEIQSYRDLPKMYNQWCSV 144 Query: 137 LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 +++ E RP +RSREFL ++ ++ T E SK +M Y Sbjct: 145 VRWEKETRP---FLRSREFLWQEGHTAHATAEESKERTEQMLNLY--------------- 186 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 AD FC + I + T+ + A Y Sbjct: 187 -----------------AD------FCEQVLAMPVIRGQKTEKEKFAGAE-------ATY 216 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 + +H+ K S G FG ++ + + K YV S Sbjct: 217 TIEALMHDGKALQS--------------GTSHNFGDGFARAFGIQYTDKENKLQYVHQTS 262 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 +G+ R++ A+I D G++ P +AP ++ +I I H + + E++ RLS G Sbjct: 263 WGM-TTRLIGAIIMVHGDDNGLVLPPMIAPTQVIVIPIAQHKEGVLEKAEELRDRLS--G 319 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V D + G +FA A++ G P++V +G K + ++ + R TG + +SL+E+ Sbjct: 320 FRVKLDATDNKPGWKFAEAEMRGIPVRVEIGPKDIEANQAVLARRDTGEKIVVSLDEL 377 >gi|302325997|gb|ADL25198.1| threonine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 645 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 95/417 (22%), Positives = 172/417 (41%), Gaps = 50/417 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I HS G+ W P G K ++ + IR + +R G +E+ P + + LW++SG D Y + Sbjct: 265 IEDHSPGMVFWHPKGTKMVNALKDYIRGKIDRRGYLEVITPEIVNKTLWIKSGHADKYNE 324 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + D M P + IF + ++S+R+LP + R E G+M Sbjct: 325 NMFKTL-AGDVEMAVKPMNCPCHIQIFNTGLRSWRDLPMRLAEFGKCHRYEPAGTMHGLM 383 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP---IGGDL 206 R R F+ DA+ F E S F + ++ I+H G I ++ + P +G D Sbjct: 384 RVRGFVQDDAHIF--CTEDQIASEVADFCALVKEIYHDFGFDDIVVKFSTRPEKRVGSD- 440 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + D E + +E T + L+ I+ + + K Sbjct: 441 -----EIWDKAEAAL------------AEAT---KLAGLDYILNPGEGAF------YGPK 474 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMR 323 L +L K R + G I ++LP + A + G D + H V + +G++ Sbjct: 475 LEFTL---KDSLGRDWQCGTI---QVDFNLPQRLGAEYVGKDNQKHIPVMLHRAAVGSIE 528 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +W +AP + ++ I + D +++ L G V D+ Sbjct: 529 RFLGILIEEFMGDFPLW---LAPVQARVLPIS---EKFVDYAKQVEKELVNAGVRVEVDE 582 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 E++G + +L P +IVG K V+D V ++ R G + M++ + + + Sbjct: 583 SNEKLGYKIRQCELQKVPYLLIVGEKEVADGVVSVRKRKDGDKGSMTVAQFLEMTAE 639 >gi|146302666|ref|YP_001197257.1| prolyl-tRNA synthetase [Flavobacterium johnsoniae UW101] gi|259511597|sp|A5FA31|SYP_FLAJ1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146157084|gb|ABQ07938.1| prolyl-tRNA synthetase [Flavobacterium johnsoniae UW101] Length = 492 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 77/357 (21%), Positives = 153/357 (42%), Gaps = 65/357 (18%) Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D GK M+ + ++ +I PT E ++ ++ ++SYR+LP Q R E+R R Sbjct: 102 DRPGKLMVDPNAKLEEELIVRPTSEAIIWSTYKGWVQSYRDLPLLINQWANVVRWEMRTR 161 Query: 147 FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 +R+ EFL ++ ++ T + + KM Y +IP Sbjct: 162 L-FLRTAEFLWQEGHTAHATKDEAIEESEKMMNVYADFAE--NFMAIP------------ 206 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 +V ET+ F D+ + ++++ A A TS Sbjct: 207 ----VVKGFKTETERFAGA--------------DETYCIEALMQDGKALQAGTS------ 242 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 + G ++ F A+GK +V S+G+ + R++ Sbjct: 243 ---------------------HFLGQNFAKAFDVKFANAEGKQEHVWGTSWGV-STRLMG 280 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCR--DACEKIYARLSKVGCDVFWDD 383 A+I + D +G++ P ++AP ++ ++ I K +Q+ + A ++ A+L K+ V +DD Sbjct: 281 ALIMTHSDDQGLVLPPNLAPIQVVIVPIHKTDEQLAQITAAVNELTAKLRKLKISVKYDD 340 Query: 384 MGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 Q G +FA +L G P+++ VG K + + E+ R +E ++ E+++++ + Sbjct: 341 RTTQKPGFKFAEWELKGVPVRIAVGPKDLENGTFEVARRDNLSKEVVAAEKIVDHVN 397 >gi|168178808|ref|ZP_02613472.1| putative prolyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|226950957|ref|YP_002806048.1| putative prolyl-tRNA synthetase [Clostridium botulinum A2 str. Kyoto] gi|182670058|gb|EDT82034.1| putative prolyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|226841905|gb|ACO84571.1| putative prolyl-tRNA synthetase [Clostridium botulinum A2 str. Kyoto] Length = 545 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 112/227 (49%), Gaps = 26/227 (11%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + L+E+P D E+ S KL+L+ G+I + G+Y++ PLG + L+++ ++ Sbjct: 1 MKLSKTLVHSLREDPADVEMDSQKLLLKGGLIAKVDSGLYAFTPLGYRFLEDIQKVVENN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT--DIF 118 + G ++S+P Y + ++++N+ ++ ++EE ++ + Sbjct: 61 SKKIGGSQISIP----------------YVNNLEEVSEKNNGFIL--NSNEETLSFINFL 102 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +S + SY+ LP FY+ +F + + G+M R+ L ++ + L E K + ++ Sbjct: 103 KSSVTSYKQLPLFFYENNTEFSYKGKNNLGIMGGRQIL-REYFYMVLDGENDKFNKKELI 161 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y IF + L+ + E D + +FI+ + G+ ++ K Sbjct: 162 KLYKNIFEIMNLQYNMVEDEL-----DGTIKFIIYNNIGDLRIVACK 203 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 1/136 (0%) Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ATF GK + + ++++ IE + D GI+WP + FK+ + D Sbjct: 400 CATFIDNKGKSKPFTIYKGFMDIYKIISWTIEQNKDELGIVWPMETSAFKVIVTIANVKD 459 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + EKIY+ L +G DD E+ G +F ADL G P+++ VG K + ++ VEI Sbjct: 460 EQQFKVGEKIYSSLVNIGIGTILDDRKERAGVKFKDADLWGIPIRITVG-KNIKENNVEI 518 Query: 419 KHRLTGIREDMSLEEV 434 K R + ++++ ++++ Sbjct: 519 KLRNSKEKKEIPIDQL 534 >gi|170290808|ref|YP_001737624.1| prolyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174888|gb|ACB07941.1| prolyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 479 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 90/419 (21%), Positives = 169/419 (40%), Gaps = 96/419 (22%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL----------------QSADLW 80 KG+Y WLP G + ++N+ +I+ +TG + P++ Q + W Sbjct: 37 KGMYVWLPYGYELMENIMSIMERLLRQTGHKRVYFPSIVPESVLSREFRFIKGFQDSVFW 96 Query: 81 VES-GRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 + GR D+ K LR PT E +M ++ I SYR+LP YQI + Sbjct: 97 ITKLGRQDAPEKLALR------------PTSEAIMYEVLSRWISSYRDLPIRIYQIAPIY 144 Query: 140 RDELRPRFGVMRSREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE 198 R E + ++R RE K+ ++F T E + N Sbjct: 145 RYETKATRPMLRVREVAFFKEGHTFHATYEEAVEQVN----------------------- 181 Query: 199 SGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAA 258 +V+ K F +D+++ +V+ T P+ Sbjct: 182 --------------------LEVWIYKSF-----------YDELLVPYIVVK--TLPWDT 208 Query: 259 -TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 ++N + +P+ K +E+G FG ++ T+ DG+ V S+ Sbjct: 209 FPGALYNYDIVTIMPDGK-----ALELGSAINFGDLFARTYDLTYMDEDGQRKNVNTTSF 263 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKV 375 GI R +AAVI D +G+ P +AP +I ++ I K +++ + ++ + L + Sbjct: 264 GISE-RSLAAVIAIHGDDRGLRLPPKIAPIQIVIVPIPTKDYEERIMEYSREVKSTLER- 321 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V D+ E+ G +F ++ G P+++ +G + +V + R RE + ++++ Sbjct: 322 SFRVHLDESEERPGYKFYKWEMKGVPIRIEIGRNELERREVTVFRRDKMEREAIPIDKL 380 >gi|170756076|ref|YP_001783145.1| putative prolyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|169121288|gb|ACA45124.1| putative prolyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] Length = 545 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 111/227 (48%), Gaps = 26/227 (11%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + L+E+P D E+ S KL+L+ G+I + G+Y++ PLG + L+++ ++ Sbjct: 1 MKLSKTLVHSLREDPADVEMDSQKLLLKGGLIAKVDSGLYAFTPLGYRFLEDIQKVVENN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT--DIF 118 + G ++S+P Y + ++++N+ ++ ++EE ++ + Sbjct: 61 SKKIGGSQISIP----------------YVNNLEEVSEKNNGFIL--NSNEETLSFINFL 102 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +S + SY+ LP FY+ +F + + G+M R+ L ++ + L E K + ++ Sbjct: 103 KSSVTSYKQLPLFFYENNTEFSYKGKNNLGIMGGRQIL-REYFYMVLDGENDKFNKKELI 161 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y IF + L+ + E D + +FI+ + G+ + K Sbjct: 162 KLYKNIFEIMNLQYNMVEDEL-----DGTIKFIIYNNIGDLHIVACK 203 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 1/136 (0%) Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ATF GK + + ++++ IE + D GI+WP + FK+ + D Sbjct: 400 CATFIDNKGKSKPFTIYKGFMDIYKIISWAIEQNKDELGIVWPMETSAFKVIVTIANVKD 459 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + EKIY+ L +G DD E+ G +F ADL G P+++ VG K + ++ VEI Sbjct: 460 EQQFKVGEKIYSSLVNIGIGTILDDRKERAGVKFKDADLWGIPIRITVG-KNIKENNVEI 518 Query: 419 KHRLTGIREDMSLEEV 434 K R + ++++ ++++ Sbjct: 519 KLRNSKEKKEIPIDQL 534 >gi|303244992|ref|ZP_07331315.1| prolyl-tRNA synthetase [Methanothermococcus okinawensis IH1] gi|302484644|gb|EFL47585.1| prolyl-tRNA synthetase [Methanothermococcus okinawensis IH1] Length = 471 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 99/412 (24%), Positives = 162/412 (39%), Gaps = 73/412 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLR 95 KG +LP G K IIR + TG E P L DL + G + + E+ Sbjct: 29 KGCGVYLPYGFKIRKYAFEIIRNMLDETGHDEALFPMLIPEDLLAKEGEHIKGFEDEVYW 88 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D + PT E + + + IK + +LP YQ+ FR E + ++R Sbjct: 89 VTHGGKTPLDVKLALRPTSETPIYYMMKLWIKVHTDLPIKVYQVVNTFRYETKHTRPLIR 148 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE + K+A++ T E +++ + Y F LG+ +I Sbjct: 149 LREIMTFKEAHTAHATKEDAENQVKEAINIYKNFFDELGIPTI----------------- 191 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 + ++ FP FD I ++ T VHN Sbjct: 192 ----------ISKRPEWDKFPGAEYTMAFDTIFPDGKTMQIGT--------VHN------ 227 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 L +N F + L G D Y YGI RV+A++I Sbjct: 228 LGQN---------------FAKTFELEFETADGGKD----YAYQTCYGISD-RVIASIIA 267 Query: 331 SSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 D KG+I P +VAP +I +I + K +++ + E++Y L + G V DD + Sbjct: 268 LHGDEKGLILPPNVAPIQIVIIPLLFKGKEEIAMNKAEEVYNTLKEKGFRVKLDDRDIRP 327 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEVIN 436 G +F +L G P+++ +G + + + K+ + R TG I ED L+ + N Sbjct: 328 GRKFNDWELKGAPIRIELGPRDIENKKITLFRRDTGEKFQINEDDLLDGINN 379 >gi|254429307|ref|ZP_05043014.1| threonyl-tRNA synthetase [Alcanivorax sp. DG881] gi|196195476|gb|EDX90435.1| threonyl-tRNA synthetase [Alcanivorax sp. DG881] Length = 638 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 7/190 (3%) Query: 17 DAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + R G+ H Q + G W P G + N+ IR + + G E+S P Sbjct: 239 EAEKRDHRKLAREMGLFHIQQEAVGSMFWHPKGWRMRQNLENYIRGKMEKGGYQEVSTPQ 298 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG +D YG++M + + K M P + IF+ I SYR+LP Sbjct: 299 MMDRILWEQSGHWDKYGEDMFTVCTHDHKEMAVKPMNCPGHVQIFKQGITSYRDLPIRLG 358 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLK 191 + FR+E G+MR+R F DA+ F E + F+ LR ++ G Sbjct: 359 EFTTLFRNEAHGALHGLMRARSFSQDDAHIF--CTEEQINEETAGFIKMLREVYEDFGFD 416 Query: 192 SIPMRAESGP 201 S ++ P Sbjct: 417 SFRIKFSDRP 426 >gi|256424918|ref|YP_003125571.1| prolyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] gi|256039826|gb|ACU63370.1| prolyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] Length = 493 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 72/336 (21%), Positives = 149/336 (44%), Gaps = 65/336 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + ++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 117 EEELIVRPTSETIIWNTYKDWIQSYRDLPLLINQWANVVRWEMRTRL-FLRTAEFLWQEG 175 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E + +M Y AD E Sbjct: 176 HTAHATAEEAIAETRQMLEVY--------------------------------ADFAE-- 201 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 ++M P+ + + S E+ +A D + ++L ++ + Sbjct: 202 -----NYMALPV---------VRGVKSPAER----FAGALDTY---CIEALMQD----GK 236 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ F + K YV S+G+ + R++ A++ + D G++ Sbjct: 237 ALQAGTSHFLGQNFAKAFDVKFSNKENKQEYVWATSWGV-STRLIGALVMAHSDDDGLVL 295 Query: 341 PDSVAPFKISLINI-KAHDQVCR-DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 P +AP ++ ++ I K +Q + DA ++I + L K+G V +DD + G +FA + Sbjct: 296 PPRIAPLQVVIVPIYKGEEQKSKIDAKVDEIISGLKKLGIRVKYDDSDNARPGWKFAEYE 355 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G P+++ +G++ + ++ E+ R T +E +SL+ Sbjct: 356 MKGVPVRIALGARDLENNVAEVARRDTKTKESLSLD 391 >gi|156030577|ref|XP_001584615.1| hypothetical protein SS1G_14384 [Sclerotinia sclerotiorum 1980] gi|154700775|gb|EDO00514.1| hypothetical protein SS1G_14384 [Sclerotinia sclerotiorum 1980 UF-70] Length = 362 Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 22/140 (15%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFK-----------------GADGKDHY-VQMGSYGIGA 321 + IE+GH F+ GT+YS PM AT G +G+ ++MG +GIG Sbjct: 223 KAIELGHTFHLGTRYSKPMEATVTVPCNLVENKSEEITALLGENGQVQVSMEMGCHGIGV 282 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 R++ AV E+ DGKG+ WP ++PF+I +I K D+ +I+ S D Sbjct: 283 TRMIGAVAETLVDGKGLNWPRVMSPFEIVVIPGKGSDE----GALQIFDIFSIAAMDPVI 338 Query: 382 DDMGEQIGSQFAVADLLGFP 401 DD G I + ADL+G+P Sbjct: 339 DDRGVSIAWKLRDADLIGYP 358 >gi|163847354|ref|YP_001635398.1| proline--tRNA ligase [Chloroflexus aurantiacus J-10-fl] gi|222525199|ref|YP_002569670.1| Proline--tRNA ligase [Chloroflexus sp. Y-400-fl] gi|163668643|gb|ABY35009.1| Proline--tRNA ligase [Chloroflexus aurantiacus J-10-fl] gi|222449078|gb|ACM53344.1| Proline--tRNA ligase [Chloroflexus sp. Y-400-fl] Length = 525 Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 8/164 (4%) Query: 260 SDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + D P R+ RG +G I P + + A+G++ + + Sbjct: 348 ADISQAEAGDPCPWCGTARIEGRGALIGAI-----TAPQPTALLVQDAEGQNRPLIITGL 402 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 I ++ V+E HD +GI+WP ++APF I L+ + + V A + A L G Sbjct: 403 EIDLEPLLYLVVEQHHDERGIVWPAAIAPFAIHLVTLGRGEAVV-TAGHALAAMLQTAGW 461 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 V DD E+ G +F ADL+G P +V++ K ++ +++EI+HR Sbjct: 462 HVLIDDRDERAGVKFNDADLIGAPWRVVISEKLLAANQLEIRHR 505 >gi|126662081|ref|ZP_01733080.1| prolyl-tRNA synthetase [Flavobacteria bacterium BAL38] gi|126625460|gb|EAZ96149.1| prolyl-tRNA synthetase [Flavobacteria bacterium BAL38] Length = 492 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 76/352 (21%), Positives = 150/352 (42%), Gaps = 65/352 (18%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GK M+ + ++ +I PT E ++ ++ ++SYR+LP Q R E+R R Sbjct: 105 GKLMVDPNAKLEEELIVRPTSEAIIWSTYKGWVQSYRDLPLLINQWANVVRWEMRTRL-F 163 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T + + KM Y Sbjct: 164 LRTAEFLWQEGHTAHATRQEAIEESEKMMNVY---------------------------- 195 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 AD +++FM P+ I L + E+ +A + + + Sbjct: 196 ----AD-------FAQNFMAIPV---------IKGLKTETER----FAGADETY---CIE 228 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 +L ++ + ++ G + G ++ F +GK YV S+G+ + R++ A++ Sbjct: 229 ALMQD----GKALQAGTSHFLGQNFAKAFDVKFANKEGKQEYVWGTSWGV-STRLMGALV 283 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQ---VCRDACEKIYARLSKVGCDVFWDDMGE 386 + D KG++ P ++AP ++ ++ I D+ + + A L K+G V +D+ Sbjct: 284 MTHSDDKGLVLPPNLAPIQVVIVPIYKTDEQFDAISEQVNALAAELRKLGISVKYDNRDT 343 Query: 387 QI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 Q G +FA +L G P+++ +G + + EI R +E +S E V +Y Sbjct: 344 QKPGFKFAEWELKGVPVRIALGPNDLENGTYEIARRDNLSKEVVSKEGVASY 395 >gi|311747849|ref|ZP_07721634.1| proline--tRNA ligase [Algoriphagus sp. PR1] gi|126575841|gb|EAZ80151.1| proline--tRNA ligase [Algoriphagus sp. PR1] Length = 493 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 73/333 (21%), Positives = 136/333 (40%), Gaps = 81/333 (24%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E V+ +++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 115 EEELIVRPTSETVIWSTYKNWIQSYRDLPLLVNQWANVVRWEMRTRL-FLRTAEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T + ++ +M Y Sbjct: 174 HTAHATAKEAEAETLQMMNVYATF------------------------------------ 197 Query: 221 VFCSKDFMDFPI----PSENTDF---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 ++DFM P+ S N F DD + + ++++ Sbjct: 198 ---AEDFMALPVVRGRKSANERFAGADDTLCIEAMMQ----------------------- 231 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 + ++ G + G ++ F DGK YV S+G+ + R++ A+I + Sbjct: 232 ----DGKALQAGTSHFLGQNFAKAFDVKFAAKDGKLDYVWGTSWGV-STRLMGALIMAHS 286 Query: 334 DGKGIIWPDSVAPFKISLINI----KAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQI 388 D G++ P +AP ++ ++ I + D + A E I A L KVG V +D+ + Sbjct: 287 DDNGLVLPPKLAPIQVVIVPIYRKEEEFDAISEKANE-IMAELRKVGISVKYDNRDTHKP 345 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +FA +L G PL++ +G + + + +EI R Sbjct: 346 GWKFAEYELKGVPLRIAIGPRDLENGTIEIARR 378 >gi|332299347|ref|YP_004441268.1| Prolyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] gi|332176410|gb|AEE12100.1| Prolyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] Length = 494 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 75/338 (22%), Positives = 148/338 (43%), Gaps = 65/338 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ +++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 119 EEELIVRPTSETIIWSTYKNWIQSYRDLPLLCNQWANVVRWEMRTRL-FLRTAEFLWQEG 177 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E + KM Y D + E + L Sbjct: 178 HTAHATQEEAIAEARKMIGVY----------------------EDFAREMLAL------- 208 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 P+ I+ + S E+ +A D + +++ ++ + Sbjct: 209 ----------PV---------IVGVKSETER----FAGAIDTYT---IEAMMQD----GK 238 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ TF +G YV S+G+ + R+V A+I + D G++ Sbjct: 239 ALQSGTSHFLGQNFAKAFDVTFLDKEGNRDYVWATSWGV-STRLVGALIMAHSDDNGLVL 297 Query: 341 PDSVAPFKISLINI-KAHDQVCR--DACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 P +AP ++ ++ I K+ +++ R + +KI + L + G V DD ++ G +FA + Sbjct: 298 PPRIAPIQVVIVPIYKSEEELQRIHETADKIVSELRQHGVSVQIDDNDNKKPGWKFAEYE 357 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G P+++ +G + + VE+ R T +E M LE + Sbjct: 358 MKGVPVRLALGMRDLEHGTVEVARRDTLTKETMPLEGI 395 >gi|228471025|ref|ZP_04055869.1| prolyl-tRNA synthetase [Porphyromonas uenonis 60-3] gi|313885947|ref|ZP_07819685.1| proline--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] gi|228307245|gb|EEK16268.1| prolyl-tRNA synthetase [Porphyromonas uenonis 60-3] gi|312924477|gb|EFR35248.1| proline--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] Length = 494 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 75/336 (22%), Positives = 147/336 (43%), Gaps = 65/336 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ +++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 119 EEELIVRPTSETIIWSTYKNWIQSYRDLPLLCNQWANVVRWEMRTRL-FLRTAEFLWQEG 177 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E + KM Y D + E + L Sbjct: 178 HTAHATQEEAIAEARKMIGVY----------------------EDFAREMLAL------- 208 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 P+ I+ + S E+ +A D + +++ ++ + Sbjct: 209 ----------PV---------IVGVKSETER----FAGAIDTYT---IEAMMQD----GK 238 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ TF +G YV S+G+ + R+V A+I + D G++ Sbjct: 239 ALQSGTSHFLGQNFAKAFDVTFLDKEGNRDYVWATSWGV-STRLVGALIMAHSDDNGLVL 297 Query: 341 PDSVAPFKISLINI-KAHDQVCR--DACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 P +AP ++ ++ I K+ +++ R + +KI + L + G V DD ++ G +FA + Sbjct: 298 PPRIAPIQVVIVPIYKSEEELQRIHETADKIVSELRQHGVSVQIDDNDNKKPGWKFAEYE 357 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G P+++ +G + + VE+ R T +E M LE Sbjct: 358 MKGVPVRLALGMRDLEHGTVEVARRDTLTKETMPLE 393 >gi|33322959|gb|AAQ07216.1|AF496524_1 prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis] Length = 96 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 2/96 (2%) Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 V MGSYGIG R+++AV+E G+ WP +APF I +I +K D++ E + A+ Sbjct: 3 VIMGSYGIGVTRLLSAVVEQHAXENGVAWPKEIAPFGIHIIQMKMKDEIQSKLAEDLEAK 62 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 +K DV +DD E+ G +F ADL+G P+++ VG Sbjct: 63 FAK--YDVLYDDRNERPGVKFNDADLVGAPIRITVG 96 >gi|315187358|gb|EFU21114.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6578] Length = 477 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 75/335 (22%), Positives = 146/335 (43%), Gaps = 66/335 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ +++ I+SYR+LP Q R E R R +R+ EFL ++ Sbjct: 101 EEPLVVRPTSETIIWSMYKKWIQSYRDLPLLINQWANVVRWEKRTRL-FLRTTEFLWQEG 159 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 + T ++ + + L ++ + + E++ L Sbjct: 160 H----TAHATREEAEEEALRMLHVYRKF------------------AEEYLALP------ 191 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 VF + +E+ F ++ SI +++ ++K+ Sbjct: 192 VFYGRK-------TESEKFAGAVTTYSI--------------------EAMMQDKK---- 220 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ TF+ G YV S+G+ + R++ AVI + D +G++ Sbjct: 221 ALQAGTSHFLGQNFAKAFDVTFQTQAGSLDYVWATSWGV-STRLIGAVIMAHSDNRGLVL 279 Query: 341 PDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVAD 396 P +AP + +I I K DQV D ++++ARL++ G V D D G +FA + Sbjct: 280 PPRIAPTQAVIIPIYTKKTVDQVA-DYAKRVFARLTEAGLSVEMDLDDQNSPGWKFAEWE 338 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G P++V VG + + K + R TG + +S+ Sbjct: 339 LRGVPIRVEVGPRDMEQEKAVLVRRDTGEKRAVSV 373 >gi|319651798|ref|ZP_08005923.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317396450|gb|EFV77163.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 643 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 92/404 (22%), Positives = 175/404 (43%), Gaps = 36/404 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G N+ I +++ R G + P + S DL+ SG +D Y ++M + Sbjct: 264 QGLPMWLPKGATIRRNIERYIVDKEERLGYDHVYTPIMGSVDLYKTSGHWDHYQEDMFPV 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I+++ I SYR LP ++ R E+ G+ R R Sbjct: 324 MEMDNEQLVLRPMNCPHHMMIYKNGIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ L ++ + R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKEEFKRVVHLILEVYKDFDINDYSFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M + + D I L+ E A Y DV ++ +L ++ Sbjct: 429 PQDTEKYFDDDEMWEKAQAMLKEAMDEIGLDYFEAEGEAAFYGPKLDV---QVKTALGKD 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPERFDL----TYVAEDGKPHRPVVIHRGVVSTMERFVAFLIEEY 537 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ +I + + D +++ +L G V DD E+IG + Sbjct: 538 ---KG-AFPTWLAPVQVQVIPVSP--DIHFDYAKQVREQLQAEGFRVELDDRNEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A + P ++VG V++ V ++ E +S E+ I+ Sbjct: 592 REAQMQKTPYMLVVGDNEVAEKAVNVRKYGEQKSETVSFEDFIS 635 >gi|110834994|ref|YP_693853.1| threonyl-tRNA synthetase [Alcanivorax borkumensis SK2] gi|110648105|emb|CAL17581.1| Threonyl-tRNA synthetase [Alcanivorax borkumensis SK2] Length = 638 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 89/204 (43%), Gaps = 7/204 (3%) Query: 3 RSKYFLPILQENPRDAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIRE 59 R K L + +AE H KL G+ H Q + G W P G + N+ IR Sbjct: 225 RDKKELNAYLKQLEEAEKRDHRKLAKEMGLFHIQQEAVGSMFWHPKGWRMRKNLENYIRG 284 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 + + G E+S P + LW +SG +D YG++M + + K M P + IF+ Sbjct: 285 KMEKGGYEEVSTPQMMDRILWEQSGHWDKYGEDMFTVCTHDHKEMAVKPMNCPGHVQIFK 344 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 I SYR+LP + FR+E G+MR+R F DA+ F E + F Sbjct: 345 QGITSYRDLPIRLGEFTTLFRNEAHGALHGLMRARSFSQDDAHIF--CTEEQVNEETAGF 402 Query: 179 VSYLR-IFHRLGLKSIPMRAESGP 201 + LR ++ G S ++ P Sbjct: 403 IKMLREVYADFGFDSFRIKFSDRP 426 >gi|148381445|ref|YP_001255986.1| putative prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|153934131|ref|YP_001385820.1| putative prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|153935851|ref|YP_001389227.1| putative prolyl-tRNA synthetase [Clostridium botulinum A str. Hall] gi|148290929|emb|CAL85065.1| prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|152930175|gb|ABS35675.1| putative prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|152931765|gb|ABS37264.1| putative prolyl-tRNA synthetase [Clostridium botulinum A str. Hall] Length = 545 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/225 (22%), Positives = 105/225 (46%), Gaps = 22/225 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + L+E+P D E+ S KL+L+ G+I + G+Y++ PLG + L+++ ++ Sbjct: 1 MKLSKTLVHSLREDPADVEMDSQKLLLKGGLIAKVDSGLYAFTPLGYRFLEDIQKVVENN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G ++S+P Y + ++++N+ ++ + +S Sbjct: 61 SKKIGGSQISIP----------------YVNNLEEVSEKNNGFILNFNEETLSFINFLKS 104 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY+ +F + + G+M R+ L ++ + L E K + ++ Sbjct: 105 SVTSYKQLPLFFYENNTEFSYKGKNNLGIMGGRQIL-REYFYMVLDGENDKFNKKELIKL 163 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y IF + L+ + E D + +FI+ + G+ + K Sbjct: 164 YKNIFEIMNLQYNMVEDEL-----DGTIKFIIYNNIGDLHIVACK 203 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 1/136 (0%) Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ATF GK + + ++++ IE + D GI+WP + FK+ + D Sbjct: 400 CATFIDNKGKSKPFTIYKGFMDIYKIISWTIEQNKDELGIVWPMETSAFKVIVTIANVKD 459 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + EKIY+ L +G DD E+ G +F ADL G P+++ VG K + ++ VEI Sbjct: 460 EQQFKVGEKIYSSLVNIGIGTILDDRKERAGVKFKDADLWGIPIRITVG-KNIKENNVEI 518 Query: 419 KHRLTGIREDMSLEEV 434 K R + ++++ ++++ Sbjct: 519 KLRNSKEKKEIPIDQL 534 >gi|68076271|ref|XP_680055.1| prolyl-t-RNA synthase [Plasmodium berghei strain ANKA] gi|56500925|emb|CAH98273.1| prolyl-t-RNA synthase, putative [Plasmodium berghei] Length = 523 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 25/238 (10%) Query: 4 SKY-FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +KY F I +N + + +L+ R I + + G+Y+ LPLG + ++ + I Sbjct: 58 TKYIFNKIFNDNIKQNGDKASELLFRANYIKEIN-GLYNMLPLGLRVINKIKDFINNYLE 116 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-------ADRN----------DKAMI 105 + + + + LQ LW S RY Y E L + AD N + I Sbjct: 117 KINSHSVFLSILQPKRLWNISDRYKLYSDEFLYVYKQKQQKADTNLGETIKKKFEEDGNI 176 Query: 106 YGPTHEE----VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAY 161 PT EE ++ +++ + + ++ P +Q KFR+E R + +S+EFLMKD Y Sbjct: 177 LSPTCEETALTLINEVYNLNA-TEKHFPLLIHQYNYKFRNEKRLEKSLFKSKEFLMKDGY 235 Query: 162 SFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGE 218 SF + Y Y IF++LGLK +I + + + SHE+ +L G+ Sbjct: 236 SFHTNEKCMNEIYEIYKECYNDIFNKLGLKYNIIKKRKKDKMNALESHEYQILCRDGK 293 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 66/172 (38%), Gaps = 37/172 (21%) Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 E HIF G YS ++ F + + MGSYGIG R++ +I++ +D GI P Sbjct: 296 EGAHIFKLGDYYSKKLNINFLNKKNEKKNIYMGSYGIGINRLLYFLIDNFYDENGIKLPS 355 Query: 343 SVAPFKISLINIKAHDQVCRDACEKI---------------------------------- 368 VAPF I LI + + KI Sbjct: 356 QVAPFSIYLIQTNQKSKYSSEKVNKIANTLRNEINEKTNDNKTLYNSLNSNDMEYILTIW 415 Query: 369 -YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 Y L D ++D+ + + DL+G +VI+ K SD K +IK Sbjct: 416 LYTILKANNIDTYYDNTDLHLSRKLKNCDLIGASNRVIINLK--SDEKKKIK 465 >gi|110638045|ref|YP_678253.1| threonyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] gi|123354610|sp|Q11UK3|SYT_CYTH3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|110280726|gb|ABG58912.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Cytophaga hutchinsonii ATCC 33406] Length = 645 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 102/458 (22%), Positives = 173/458 (37%), Gaps = 77/458 (16%) Query: 5 KYFLPILQE-NPRDAEIASHKLML-----RTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 K +L IL+E RD +L L + GM G+ WLP G + + ++ Sbjct: 229 KDYLTILEEAKKRDHRKLGKELELFAFSEKVGM------GLPLWLPKGALLRERLENFLK 282 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTD 116 + Q R G + P + + L+V SG +D YGK+ + + + P + + Sbjct: 283 KAQVRAGYQPVVTPHIGNKQLYVTSGHFDKYGKDSFQPIFTPHEGEQFLLKPMNCPHHCE 342 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+++ +SY++LP F + +R E G+ R R F DA+ F P+ K + Sbjct: 343 IYKTKPRSYKDLPIRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CRPDQVKEEFL 401 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 K+ L +F LG + I L D + +D Sbjct: 402 KVIDLVLYVFKVLGFNDYTAQ--------------ISLRDPENKDKYIGED--------- 438 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHI 287 EQW A + EK ++ E + G + +G Sbjct: 439 --------------EQWQKAEQAIIEASAEKGLSTVTELGEAAFYGPKLDFMVKDALGRK 484 Query: 288 FYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIW- 340 + GT Y LP + G+D + H V + G++ AV+ G +W Sbjct: 485 WQLGTIQVDYQLPNRFELEYTGSDNQKHRPVMLHRAPFGSLERFIAVLIEHVAGNFPLWL 544 Query: 341 -PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 PD +A IS + D + +Y RL F D+ E+IG + ++ Sbjct: 545 SPDQIAILPIS--------EKFNDYAQDVYDRLLVKDIRGFIDNRDEKIGKKIRDTEVKK 596 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 P +++G K V++ K+ I+ M +E+ I Y Sbjct: 597 VPFMLVIGEKEVNEGKIAIRKHGGEDLGSMLVEDFIQY 634 >gi|28211884|ref|NP_782828.1| threonyl-tRNA synthetase [Clostridium tetani E88] gi|73919782|sp|Q891T0|SYT_CLOTE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|28204327|gb|AAO36765.1| threonyl-tRNA synthetase [Clostridium tetani E88] Length = 639 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 108/448 (24%), Positives = 185/448 (41%), Gaps = 56/448 (12%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T I++ G + P G + + RE+ + G Sbjct: 231 YLKMLEEAKRRDHRKLGKELDLFT--INEEGPGFPFFHPKGMVVRNILENFWREKHTKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y KE + +++ P + +++SH+ SY Sbjct: 289 YDEIRTPVILNEELWHRSGHWDHY-KENMYFTKIDNENFAIKPMNCPGSILVYKSHLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKH---SYNKMFVSY 181 + P ++ L R EL G+MR R F DA+ F +T E K + K+ S+ Sbjct: 348 KEFPMRLGELGLVHRHELSGALHGLMRVRCFTQDDAHIF-MTKEQIKDEILNVIKLIDSF 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++F + R E +G D E +A G +++ I + F Sbjct: 407 YKVFGFEYFVELSTRPEDS-MGSDEDWE---VATNGLKNALEGAG-LEYKINEGDGAF-- 459 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPM 298 Y D H L D + R + G I F ++ L Sbjct: 460 --------------YGPKIDFH---LKDCI-------GRTWQCGTIQLDFQMPERFDL-- 493 Query: 299 SATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 T+ G DG+ H V + G++ R + +IE +P +AP ++ ++ I Sbjct: 494 --TYVGQDGEKHRPVMVHRVVFGSIERFIGILIEHFAGA----FPTWLAPVQVKVMTITD 547 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +D K+ L + G V +DD E+IG + A L P +I+G K VS++KV Sbjct: 548 SQ---KDYANKVVNDLKEKGIRVEFDDRNEKIGYKIREAQLQKVPYMIILGDKEVSENKV 604 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ R G +SL+E + ++ N Sbjct: 605 AVRSRKEGDLGAISLKEFVAKLNYEIDN 632 >gi|171780136|ref|ZP_02921040.1| hypothetical protein STRINF_01924 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281484|gb|EDT46919.1| hypothetical protein STRINF_01924 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 697 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 92/399 (23%), Positives = 163/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + + P L S DL+ SG +D Y Sbjct: 303 MISQEVGQGLPFWLPDGATIRRTLERYIVDKEVESGYLHVYTPPLASVDLYKTSGHWDHY 362 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 363 REDMFPTMDMGDGEEFVLRPMNCPHHIQVYKYHVHSYRELPIRIAEIGMMHRYEKSGALS 422 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + K + ++ L R Sbjct: 423 GLQRVREMSLNDGHLF-VTPEQIQEEFQKALQLIIDVYEDFNLTEYRFR----------- 470 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 471 ---LSLRDPKDTHKYYDDDEM-----WENAQSMLKAALDEMGVEYFEAEGEAAFYGPKLD 522 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L T+ GADG++H M G I Sbjct: 523 I---QVKTALGNEETLSTIQLD----FLLPERFGL----TYIGADGEEHRPVMIHRGVIS 571 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I + V D +I L G V Sbjct: 572 TMERFTAILIENYKGAFPTW---LAPHQVTVIPVSNEAHV--DYAWEIAKVLRDKGVRVD 626 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K ++D V ++ Sbjct: 627 VDERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVR 665 >gi|254495081|ref|ZP_05108005.1| prolyl-tRNA synthetase [Polaribacter sp. MED152] gi|85819431|gb|EAQ40588.1| prolyl-tRNA synthetase [Polaribacter sp. MED152] Length = 492 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 70/355 (19%), Positives = 154/355 (43%), Gaps = 65/355 (18%) Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D+ GK + + ++ ++ PT E ++ + ++ I+SYR+LP Q R E+R R Sbjct: 102 DNEGKLRVDPEAKLEEELVVRPTSEAIIWNTYKGWIQSYRDLPLLINQWANVVRWEMRTR 161 Query: 147 FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 +R+ EFL ++ ++ T + +M D+ Sbjct: 162 L-FLRTAEFLWQEGHTAHATKAEAVAEAKQM--------------------------QDV 194 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 EF +++FM P+ I + S E+ +A D + Sbjct: 195 YAEF-------------AENFMAMPV---------IKGVKSDSER----FAGAEDTYT-- 226 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 ++L ++ + ++ G + G ++ + +GK YV S+G+ + R++ Sbjct: 227 -IEALMQD----GKALQAGTSHFLGQNFAKAFDVKYTSKEGKQEYVWATSWGV-STRLIG 280 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA---RLSKVGCDVFWDD 383 +I + D G++ P +AP ++ ++ I +D+ +K+ A L K G V +D+ Sbjct: 281 GLIMTHSDDNGLVLPPKLAPIQVVIVPIYKNDEQLEAISDKVNAISIELGKKGISVKYDN 340 Query: 384 MGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 + G++FA +L G P+++ +G++ + + +E+ R T + + + + ++Y Sbjct: 341 RDTFRPGAKFAEYELKGVPVRIALGARDLENGTLEVARRDTLEKNTIDINDAVSY 395 >gi|306831875|ref|ZP_07465030.1| threonine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425801|gb|EFM28918.1| threonine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 648 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 91/399 (22%), Positives = 163/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + + P L S DL+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPDGATIRRTLERYIVDKEVASGYLHVYTPPLASVDLYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 REDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALS 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + K + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQKALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPKDTHKYYDDDEM-----WENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L T+ GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFGL----TYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I + V D ++ L G V Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTVIPVSNEAHV--DYAWEVAKVLRDKGVRVD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K ++D V ++ Sbjct: 578 VDERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVR 616 >gi|28948883|pdb|1NJ1|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From Methanothermobacter Thermautotrophicus Bound To Cysteine Sulfamoyl Adenylate gi|28948884|pdb|1NJ2|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From Methanothermobacter Thermautotrophicus gi|28948885|pdb|1NJ5|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From Methanothermobacter Thermautotrophicus Bound To Proline Sulfamoyl Adenylate gi|28948886|pdb|1NJ6|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From Methanothermobacter Thermautotrophicus Bound To Alanine Sulfamoyl Adenylate Length = 501 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 92/413 (22%), Positives = 158/413 (38%), Gaps = 74/413 (17%) Query: 23 HKLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-L 79 H ++ +I Q KG++ W+P G N I+R +R E+ P L D L Sbjct: 45 HNILEEAEIIDQRYPVKGMHVWMPHGFMIRKNTLKILRRILDRDHE-EVLFPLLVPEDEL 103 Query: 80 WVESGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 E+ + E+ + + + + PT E VM +F ++S+ +LP FYQ+ Sbjct: 104 AKEAIHVKGFEDEVYWVTHGGLSKLQRKLALRPTSETVMYPMFALWVRSHTDLPMRFYQV 163 Query: 136 QLKFRDELRPRFGVMRSREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 FR E + ++R RE K+A++ T ++ + Y F+ LG+ + Sbjct: 164 VNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIYKEFFNSLGIPYLI 223 Query: 195 MRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 R + FP FD ++ ++ T Sbjct: 224 TR---------------------------RPPWDKFPGSEYTVAFDTLMPDGKTLQIGT- 255 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 VHN G ++ F+ +G YV Sbjct: 256 -------VHN-------------------------LGQTFARTFEIKFETPEGDHEYVHQ 283 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYAR 371 YG+ RV+A+VI D G+ P VA ++ ++ I KA ++V +AC ++ +R Sbjct: 284 TCYGLSD-RVIASVIAIHGDESGLCLPPDVAAHQVVIVPIIFKKAAEEVM-EACRELRSR 341 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 L G V DD + G ++ ++ G PL+V +G + + I R TG Sbjct: 342 LEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTG 394 >gi|288905772|ref|YP_003430994.1| Threonyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|325978807|ref|YP_004288523.1| threonyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732498|emb|CBI14070.1| Threonyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|325178735|emb|CBZ48779.1| threonyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 648 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 91/399 (22%), Positives = 163/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + + P L S DL+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPDGATIRRTLERYIVDKEVASGYLHVYTPPLASVDLYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 REDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALS 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + K + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQKALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPKDTHKYYDDDEM-----WENAQSMLKAALDEMGVEYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L T+ GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFGL----TYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I + V D ++ L G V Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTVIPVSNEAHV--DYAWEVAKVLRDKGVRVD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K ++D V ++ Sbjct: 578 VDERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVR 616 >gi|332664427|ref|YP_004447215.1| threonyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100] gi|332333241|gb|AEE50342.1| threonyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100] Length = 645 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 102/455 (22%), Positives = 181/455 (39%), Gaps = 77/455 (16%) Query: 15 PRDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIR 58 P+ ++ H +ML H K G+ WLP G D + +R Sbjct: 224 PKQKDLQEHLVMLEEARKRDHRKLGQELELFMFSERVGAGLPIWLPKGNALRDRLMNFLR 283 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTD 116 EQ + G ++ P + +L+V SG Y YGK+ + ++ + + P + + Sbjct: 284 VEQEKRGYKLVTTPHIGRKELYVTSGHYAKYGKDSFQPIHTPKDGEEFLLKPMNCPHHCE 343 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+ SYR+LP + +R E G+ R R F DA+ F T E K + Sbjct: 344 IYAHRPHSYRDLPMRIAEFGTVYRYEQTGELHGLSRVRGFTQDDAHIF-CTEEQVKGEFL 402 Query: 176 KMFVSYLRIFHRLGLK----SIPMRAESGP---IGGD---LSHEFIVLADTGETQVFCSK 225 + + +++G K I +R + P +G D + E ++ T E + + Sbjct: 403 NVLDLTRTVLYKMGFKEFTAQISLRDPNTPEKYLGSDENWRNAENAIIEATREVGLKTTM 462 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 + + DF + ++I QW ++G Sbjct: 463 ELGEAAFYGPKLDF---MVRDAIGRQW------------------------------QLG 489 Query: 286 HIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIWP 341 I Y+LP + GAD K H V + G+M R ++ +IE++ GK +W Sbjct: 490 TI---QVDYNLPERFELEYVGADNKTHRPVMIHRAPFGSMERFISILIENTA-GKFPLW- 544 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 + P + +L+ I + D C++I +L+ + DD E IG + +L P Sbjct: 545 --LMPEQYALLPI---SEKFVDYCKEIEEKLATHDIRGYVDDRNETIGRKIRDTELKRIP 599 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +IVG K + + V ++ + G + MSLE ++ Sbjct: 600 YMLIVGEKEMEATGVAVRRQGEGDKGSMSLEAFVS 634 >gi|284161870|ref|YP_003400493.1| prolyl-tRNA synthetase [Archaeoglobus profundus DSM 5631] gi|284011867|gb|ADB57820.1| prolyl-tRNA synthetase [Archaeoglobus profundus DSM 5631] Length = 476 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 91/394 (23%), Positives = 158/394 (40%), Gaps = 74/394 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG+Y WLP G K V A +RE +R E+ PTL D+ + ES + E+ Sbjct: 35 KGLYVWLPFGFKIRQLVYAKLRELLDRDHQ-EVYFPTLIPEDMLMKESKHIKGFEDEVYW 93 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + + D + PT E M +F+ I+S+ +LP YQI FR E + ++R Sbjct: 94 VTHGGLEPLDVKLALRPTSETAMYPMFKLWIRSHADLPLKVYQIVNVFRYETKHTRPLIR 153 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE K+A++ T E ++ + Y + L + + Sbjct: 154 LREVTSFKEAHTVHRTYEEAEEQVRQAVKLYKEFYDFLAIPYL----------------- 196 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 VF ++ FP D I+L++I Sbjct: 197 ----------VFRRPEWDKFP------GADYTIALDTI---------------------- 218 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +P+ R +++G + ++ ++ +G Y YGI R +A++I Sbjct: 219 MPD-----GRTLQIGTVHNLADNFARTFEIKYETPEGDHAYAHQTCYGISE-RCIASLIS 272 Query: 331 SSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGC-DVFWDDMGEQ 387 D G++ P VAP +I +I I K ++ + K+Y RL C V DD E+ Sbjct: 273 IHGDDLGLVLPFEVAPVQIVIIPILYKGKEEKVMELSRKLYERLK---CFRVVLDDSDER 329 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G+++ +L G P++ +G + + +V + R Sbjct: 330 PGAKYYKWELKGVPIRFEIGPREAENGEVVVSFR 363 >gi|187776553|ref|ZP_02993026.1| hypothetical protein CLOSPO_00065 [Clostridium sporogenes ATCC 15579] gi|187775212|gb|EDU39014.1| hypothetical protein CLOSPO_00065 [Clostridium sporogenes ATCC 15579] Length = 545 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/225 (23%), Positives = 107/225 (47%), Gaps = 22/225 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK + L+E P D ++ S KL+L+ G+I + G+Y++ PLG L+N+ II + Sbjct: 1 MRLSKTLVHSLREYPADLDMDSQKLLLKGGLITKVDSGLYAFTPLGYSFLENIQKIIEDN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G ++S+P Y K+ ++ +N++ ++ + ++ Sbjct: 61 SKKNGGFQISIP----------------YIKDFQDVSKKNNEFILDSNEENLRFINFLKN 104 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SY+ LP FY+ + + + G+M ++ L K+ + L E +K + ++ Sbjct: 105 NVTSYKQLPLFFYENNTEINYKGKNNLGIMCGKQVL-KEHFYMMLDEENNKFNKEELIKL 163 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y IF + L+ + E D + +FI+ + G++ + K Sbjct: 164 YKDIFKIMNLQYHIVEDEL-----DGTIKFIIYDNIGDSHIVECK 203 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 1/151 (0%) Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 L NK G +G I ATF GK + + ++++ IE Sbjct: 372 LCGNKLEINEGFVIGEIKKIEENLIKNECATFIDNKGKSKPFTIYKGFMDIYKIISWAIE 431 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + D GI+WP + FKI + D+ E+IY+ L G DD E+ G Sbjct: 432 QNKDELGIVWPMEASAFKIIVTIANEKDEQQFKVAEEIYSNLVNSGISTILDDRKERAGV 491 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +F ADL G P+++ VG K + ++ VEIK R Sbjct: 492 KFKDADLWGIPIRITVG-KNIKENNVEIKLR 521 >gi|306833981|ref|ZP_07467104.1| threonine--tRNA ligase [Streptococcus bovis ATCC 700338] gi|304423847|gb|EFM26990.1| threonine--tRNA ligase [Streptococcus bovis ATCC 700338] Length = 666 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 91/399 (22%), Positives = 163/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + + P L S DL+ SG +D Y Sbjct: 272 MISQEVGQGLPFWLPDGATIRRTLERYIVDKEVASGYLHVYTPPLASVDLYKTSGHWDHY 331 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 332 REDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALS 391 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + K + ++ L R Sbjct: 392 GLQRVREMSLNDGHLF-VTPEQIQEEFQKALQLIIDVYEDFDLTEYRFR----------- 439 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 440 ---LSLRDPKDTHKYYDDDEM-----WENAQSMLKAALDEMGVEYFEAEGEAAFYGPKLD 491 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L T+ GADG++H M G I Sbjct: 492 I---QVKTALGNEETLSTIQLD----FLLPERFGL----TYIGADGEEHRPVMIHRGVIS 540 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I + V D ++ L G V Sbjct: 541 TMERFTAILIENYKGAFPTW---LAPHQVTVIPVSNEAHV--DYAWEVAKVLRDKGVRVD 595 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K ++D V ++ Sbjct: 596 VDERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVR 634 >gi|327402300|ref|YP_004343138.1| Ser-tRNA(Thr) hydrolase [Fluviicola taffensis DSM 16823] gi|327317808|gb|AEA42300.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Fluviicola taffensis DSM 16823] Length = 647 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 102/444 (22%), Positives = 177/444 (39%), Gaps = 58/444 (13%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 ++Y + + RD +L L T + +G+ WLP G + + +++ Q + Sbjct: 229 TEYLERVEEAKRRDHRKVGKELELFT-FSQKVGQGLPLWLPKGAALRERLENFLKKAQRK 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSH 121 G ++ P + + +L+V SG Y+ YG + + D+ + P + +I++S Sbjct: 288 AGYEQVITPHIGNKELYVTSGHYEKYGADSFQAIKTPDPDEEFLLKPMNCPHHCEIYKSK 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY++LP F + +R E G+ R R F DA+ F T + K + K+ Sbjct: 348 PRSYKDLPARFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CTQDQVKEEFKKVIDL 406 Query: 181 YLRIFHRLGLKS----IPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 L IF L ++ I +R P IG D + E K Sbjct: 407 VLYIFKTLDFQNFKAQISLRDPENPSKYIGSDENWE---------------KAESAIIEA 451 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 + + ++ L A Y D + D+L R ++G I Sbjct: 452 AAEKNLPTVVELGE-----AAFYGPKLDFMVQ---DAL-------GREWQLGTI---QVD 493 Query: 294 YSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIW--PDSVAPFK 348 Y+LP + GAD + H V + G+M AV+ G +W D VA Sbjct: 494 YNLPERFELEYTGADNQKHRPVMIHRAPFGSMERFVAVLLEHCGGDFPLWLATDQVAILP 553 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 IS +++ +D E L+ F DD E+IG + A+L P ++VG Sbjct: 554 IS----DKYNEYAKDVLE----LLNNSDIRGFVDDRNEKIGKKIREAELKKIPFMLVVGE 605 Query: 409 KFVSDSKVEIKHRLTGIREDMSLE 432 K + +V ++ R G + MS++ Sbjct: 606 KEAEEKQVSVRQRGEGDKGSMSID 629 >gi|320547252|ref|ZP_08041545.1| threonine--tRNA ligase [Streptococcus equinus ATCC 9812] gi|320448140|gb|EFW88890.1| threonine--tRNA ligase [Streptococcus equinus ATCC 9812] Length = 697 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 91/399 (22%), Positives = 163/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + + P L S DL+ SG +D Y Sbjct: 303 MISQEVGQGLPFWLPDGATIRRTLERYIVDKEVASGYLHVYTPPLASVDLYKTSGHWDHY 362 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 363 REDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALS 422 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + K + ++ L R Sbjct: 423 GLQRVREMSLNDGHLF-VTPEQIQDEFQKALQLIIDVYEDFNLTDYRFR----------- 470 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 471 ---LSLRDPKDTHKYYDDDEM-----WENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLD 522 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L T+ GADG++H M G I Sbjct: 523 I---QVKTALGNEETLSTIQLD----FLLPERFGL----TYVGADGEEHRPVMIHRGVIS 571 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I + V D ++ L G V Sbjct: 572 TMERFTAILIENYKGAFPTW---LAPHQVTVIPVSNEAHV--DYAWEVAKLLRDKGVRVD 626 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K ++D V ++ Sbjct: 627 VDERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVR 665 >gi|237796966|ref|YP_002864518.1| putative prolyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] gi|229262943|gb|ACQ53976.1| putative prolyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] Length = 545 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 112/227 (49%), Gaps = 26/227 (11%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + L+E+P D EI S KL+L+ G+I + G+Y++ PLG L+ + ++ Sbjct: 1 MKLSKTLVHSLREDPADVEIDSQKLLLKGGLITKVDIGLYAFTPLGYSFLEGIQKVVENN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM--TDIF 118 + G ++S+P + + + ++++N++ ++ +EE++ + Sbjct: 61 SKKIGGSKISIPYVNNFE----------------DVSEKNNEFIL--NFNEEILRFINFL 102 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 R+++ SY+ LP FY+ +F + + G+M ++ L ++ + L E K ++ Sbjct: 103 RNNVTSYKQLPLFFYENNTRFSYKGKNNLGIMGGKQVL-REYFYMALDEENDKFYKKELI 161 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y IF + L+ + E D + +FI+ + G++++ K Sbjct: 162 KLYKNIFEIMNLQYNMVEDEL-----DGTIKFIIYNNMGDSRIVACK 203 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 1/136 (0%) Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ATF GK + + ++++ IE + D GI+WP + FK+ + D Sbjct: 400 CATFIDNKGKSKPFTIYKGFMDIYKIISWAIEQNKDELGIVWPMETSAFKVIVTITNVKD 459 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + EKIY+ L +G DD E+ G +F ADL G P+++ VG K + ++ VEI Sbjct: 460 EQQFRVGEKIYSSLVNIGIGTILDDRKERAGVKFKDADLWGIPIRITVG-KNIKENNVEI 518 Query: 419 KHRLTGIREDMSLEEV 434 K R + ++++ ++++ Sbjct: 519 KLRNSKEKKEIPIDQL 534 >gi|168181840|ref|ZP_02616504.1| putative prolyl-tRNA synthetase [Clostridium botulinum Bf] gi|182674840|gb|EDT86801.1| putative prolyl-tRNA synthetase [Clostridium botulinum Bf] Length = 545 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 112/227 (49%), Gaps = 26/227 (11%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + L+E+P D EI S KL+L+ G+I + G+Y++ PLG L+ + ++ Sbjct: 1 MKLSKTLVHSLREDPADVEIDSQKLLLKGGLITKVDIGLYAFTPLGYSFLEGIQKVVENN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM--TDIF 118 + G ++S+P + + + ++++N++ ++ +EE++ + Sbjct: 61 SKKIGGSKISIPYVNNFE----------------DVSEKNNEFIL--NFNEEILRFINFL 102 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 R+++ SY+ LP FY+ +F + + G+M ++ L ++ + L E K ++ Sbjct: 103 RNNVTSYKQLPLFFYENNTRFSYKGKNNLGIMGGKQVL-REYFYMALDEENDKFYKKELI 161 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y IF + L+ + E D + +FI+ + G++++ K Sbjct: 162 KLYKNIFEIMNLQYNMVEDEL-----DGTIKFIIYNNMGDSRIVACK 203 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 1/135 (0%) Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 ATF GK + + ++++ IE + D GI+WP + FK+ + D+ Sbjct: 401 ATFIDNKGKSKPFTIYKGFMDIYKIISWAIEQNKDELGIVWPMETSAFKVIVTITNVKDE 460 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 EKIY+ L +G DD E+ G +F ADL G P+++ VG K + ++ VEIK Sbjct: 461 QQFRVGEKIYSSLVNIGIGTILDDRKERAGVKFKDADLWGIPIRITVG-KNIKENNVEIK 519 Query: 420 HRLTGIREDMSLEEV 434 R + ++++ ++++ Sbjct: 520 LRNSKEKKEIPIDQL 534 >gi|153938792|ref|YP_001392858.1| putative prolyl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|152934688|gb|ABS40186.1| putative prolyl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|295320836|gb|ADG01214.1| putative prolyl-tRNA synthetase [Clostridium botulinum F str. 230613] Length = 545 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/227 (22%), Positives = 113/227 (49%), Gaps = 26/227 (11%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + L+E+P D E+ S KL+L+ G+I + G+Y++ PLG L+ + ++ + Sbjct: 1 MKLSKTLVHSLREDPADVEMDSQKLLLKGGLITKVDSGLYAFTPLGYSFLECIQKVVENK 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM--TDIF 118 + G ++S+P + + + ++++N+ ++ +EE++ + Sbjct: 61 SKKIGGSQISIPYVNNFE----------------DVSEKNNDFIL--NFNEEILMFINFL 102 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 R+++ SY+ LP FY+ +F + + G+M ++ L ++ + L E K + ++ Sbjct: 103 RNNVTSYKQLPLFFYENNTEFSYKGKNNLGIMSGKQVL-REHFYIALDEEKDKFNKKELI 161 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y IF + L+ + E D + +FI+ + G++++ K Sbjct: 162 KLYKNIFEIMNLQYNMVEDEL-----DGTIKFIIYNNIGDSRIVACK 203 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 1/136 (0%) Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ATF GK + + ++++ IE + D GI+WP + FK+ + D Sbjct: 400 CATFIDNKGKSKLFTIYKGFMDIYKIISWAIEQNKDELGIVWPMETSAFKVIVTIANVKD 459 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + EKIY+ L +G DD E+ G +F ADL G P+++ VG K + ++ VEI Sbjct: 460 EQQFKVGEKIYSSLVNIGIGTILDDRKERAGVKFKDADLWGIPIRITVG-KNIKENNVEI 518 Query: 419 KHRLTGIREDMSLEEV 434 K R + ++++ ++++ Sbjct: 519 KLRNSKEKKEIPIDQL 534 >gi|307717742|ref|YP_003873274.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] gi|306531467|gb|ADN01001.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] Length = 477 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 75/335 (22%), Positives = 146/335 (43%), Gaps = 66/335 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ +++ I+SYR+LP Q R E R R +R+ EFL ++ Sbjct: 101 EEPLVVRPTSETIIWSMYKKWIQSYRDLPLLINQWANVVRWEKRTRL-FLRTTEFLWQEG 159 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ + + + LR+ H + + + E++ L Sbjct: 160 HT-------AHATREEAEEEALRMLH---------------VYREFAEEYLALP------ 191 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 VF + +E+ F ++ SI +++ ++K+ Sbjct: 192 VFYGRK-------TESEKFAGAVTTYSI--------------------EAMMQDKK---- 220 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ TF+ G YV S+G+ + R++ AVI + D +G++ Sbjct: 221 ALQAGTSHFLGQNFAKAFDVTFQTQAGTLDYVWATSWGV-STRLIGAVIMAHSDDRGLVL 279 Query: 341 PDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVAD 396 P +AP + +I I K DQV D ++++ RL++ G V D D G +FA + Sbjct: 280 PPRIAPTQAVIIPIYTKKTVDQVA-DYAKRVFGRLAEAGLSVEMDLDDQNSPGWKFAEWE 338 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G P++V VG + + K + R TG + +S+ Sbjct: 339 LRGVPIRVEVGPRDMEQEKAVLVRRDTGEKRAVSV 373 >gi|310827810|ref|YP_003960167.1| threonyl-tRNA synthetase [Eubacterium limosum KIST612] gi|308739544|gb|ADO37204.1| threonyl-tRNA synthetase [Eubacterium limosum KIST612] Length = 637 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 98/408 (24%), Positives = 167/408 (40%), Gaps = 47/408 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H+ G + P G + + R E + G E+ P + +ADLW SG +D+Y K Sbjct: 254 MHEEGPGFPFFHPKGMVLRNELENFWRSEHMKKGYKEIKTPIMLNADLWRRSGHWDNY-K 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + ++++ SYR LP ++ R EL G+M Sbjct: 313 ENMYFTEIDGQEFAVKPMNCPGGMLVYKTRQHSYRELPLRMGELGQVHRHELHGALHGLM 372 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLS 207 R R F DA+ F LT + K + I+ G K + + E IG D Sbjct: 373 RVRTFTQDDAHIF-LTMDQVKDEVIGIIDLANEIYDIFGFKYKVELSTKPEKA-IGKDED 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E +A + +K MD+ + + F Y D H E Sbjct: 431 WE---VATDALREALEAKG-MDYQLNPGDGAF----------------YGPKIDFHLE-- 468 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVA 326 DS+ R + G I + T+ G+DG+ H V + G++ Sbjct: 469 -DSI-------GRTWQCGTI-QLDMQMPERFDLTYVGSDGEKHRPVILHRTIFGSIERFL 519 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ GK +W +AP ++ LI + AHD ++ I A+L + G V D Sbjct: 520 GILIEHFAGKFPLW---LAPVQVQLIPVSDAHDAFTKE----IAAKLEEAGIRVEIDFRD 572 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 E+IG + A + P +++G K V ++ I++R TG +E + ++E Sbjct: 573 EKIGYRIREAQMQKIPYMLVIGDKEVESGRLSIRNRDTGEQETLKIDE 620 >gi|223932680|ref|ZP_03624679.1| threonyl-tRNA synthetase [Streptococcus suis 89/1591] gi|223898650|gb|EEF65012.1| threonyl-tRNA synthetase [Streptococcus suis 89/1591] Length = 650 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 88/412 (21%), Positives = 173/412 (41%), Gaps = 36/412 (8%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++H++SYR LP ++ + R E Sbjct: 314 HEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPVRIAELGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDL 206 G+ R RE + D + F +TPE + + K + ++ L R + P + Sbjct: 374 GLQRVREMTLNDGHIF-VTPEQIQEEFKKALQLIIDVYADFNLNDYRFRLSYRDPEDKEK 432 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 ++ + + + + + D M D+ + E A Y D+ + Sbjct: 433 YYDNDEMWENAQRMLKGAMDEM-------GVDYFE-------AEGEAAFYGPKLDI---Q 475 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVV 325 + +L + +S ++ F ++ L T+ GADG++H M G I M Sbjct: 476 VKTALGNEETLSTIQLD----FLLPERFGL----TYIGADGEEHRPVMIHRGVISTMERF 527 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A++ ++ G W +AP ++++I I + D K+ L G V D+ Sbjct: 528 TAILIETYKGAFPTW---LAPTQVTMIPISVEAHL--DYAWKVAKELQDRGVRVHVDERN 582 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 E++ + + P Q+IVG K + D+ V ++ + + S+ E +++ Sbjct: 583 EKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQSVSEFVDH 634 >gi|148984063|ref|ZP_01817358.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|147923352|gb|EDK74465.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|301800452|emb|CBW33086.1| threonyl-tRNA synthetase [Streptococcus pneumoniae OXC141] Length = 647 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 474 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVVKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 616 >gi|328951014|ref|YP_004368349.1| threonyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] gi|328451338|gb|AEB12239.1| threonyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] Length = 647 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 91/416 (21%), Positives = 168/416 (40%), Gaps = 60/416 (14%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + +REEQ R G ++ P + S +L+ SG Y Y Sbjct: 267 GKGLPLWLPKGNTVRELLVQFMREEQLRRGYQLVTTPHVGSLELYKTSGHYPYYADSQFP 326 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + D+A + P + I+ + +SYR LP + +R E G+ R R Sbjct: 327 PIELEDEAYLLKPMNCPHHIRIYAARPRSYRELPLRLAEFGTVYRFEQSGELHGLTRVRG 386 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI--- 211 F DA+ F TPE K + + + +F LG+++ RA G + S +++ Sbjct: 387 FTQDDAHIF-CTPEQVKEEFLSVLDLTMHVFRTLGMEN--YRARIG-VRDPSSDKYVGED 442 Query: 212 ---VLADTGETQVFCSKDFMDFPIPSENTDFD----DIISLNSIVEQWTAPYAATSDVHN 264 LA+ + Q C + + + + + + F D + +++ +W Sbjct: 443 AKWALAER-QIQEACEEVGLAYTVEAGDAAFYGPKLDFVVRDALGREW------------ 489 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGA 321 ++G I Y+LP T+ G DG+ H V + G+ Sbjct: 490 ------------------QLGTI---QVDYNLPERFDLTYVGPDGEPHRPVMIHRAPFGS 528 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVF 380 + ++ G+ +W +AP ++ ++ I H R+ + L + G V Sbjct: 529 LERFIGILIEHFAGEFPLW---LAPVQVVVVPITDRHLAYAREVAQA----LREAGIRVE 581 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E++ ++ A+ P+ ++VG + V+ V ++ R T R LE V+ Sbjct: 582 VDTRSERMNAKIRDAETQKVPVILVVGDQEVAQRTVAVRDRRTKERATRPLEAVVQ 637 >gi|295115128|emb|CBL35975.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [butyrate-producing bacterium SM4/1] Length = 605 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 103/418 (24%), Positives = 162/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+H G +LP G + + + RE + G +E+S P + + LW SG +D Y Sbjct: 216 MMHDAGPGFPFFLPKGMQLKNTLLDYWREIHKKAGYVEISTPIILNRSLWETSGHWDHYK 275 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M + D D A+ P + ++ S +SYR+LP ++ L R E + G Sbjct: 276 NNMYTTVIDEEDYAI--KPMNCPGGVLVYASEPRSYRDLPLRMGELGLVHRHEKSGQLHG 333 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGD 205 +MR R F DA+ F +TPE K + ++ G K + R E +G D Sbjct: 334 LMRVRCFTQDDAHIF-MTPEQIKDEIKGVATLINEVYTLFGFKYHVELSTRPEDS-MGSD 391 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 E LA G + + D + P D A Y D H E Sbjct: 392 EDWE---LATEG---LRSALDELGLPYVVNEGD--------------GAFYGPKIDFHLE 431 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 +G + GT + LP + GADG+ H + + Sbjct: 432 DC----------------IGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPIMIHRVVF 475 Query: 320 GAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G++ R + +IE +P +AP ++ ++ I D+ D K+Y LS+ G Sbjct: 476 GSIERFIGILIEHFAGA----FPTWLAPVQVKVLPIS--DKYA-DYAAKVYESLSEAGIR 528 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + A P ++VG K + V ++ R G SLE I Sbjct: 529 AEVDTRSEKIGYKIREAQTNKIPYMLVVGQKEEEEGTVSVRSRFAGDEGASSLESFIE 586 >gi|322807448|emb|CBZ05022.1| threonyl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 635 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 101/420 (24%), Positives = 163/420 (38%), Gaps = 49/420 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH+ G + P G + + REE + G E+ P + + +LW +SG +D Y K Sbjct: 255 IHEEGPGFPFFHPKGMIIRNILENFWREEHTKAGYQEIRTPLILNEELWHQSGHWDHY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + +D P + ++++ + SYR+LP ++ + R EL G+M Sbjct: 314 ENMYFTNIDDSDYAIKPMNCPGGILVYKNSMHSYRDLPLRLSELGIVHRHELSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ + +T E K + + + F++L E+ Sbjct: 374 RVRCFTQDDAHLY-MTKEQIKEEIVGI-IKLIDKFYKL-----------------FGFEY 414 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 V T S + + D I + E A Y D H L D Sbjct: 415 FVELSTRPEDSMGSDEDWEIATNGLREALDSIGKEYRVNEGDGAFYGPKIDFH---LKDC 471 Query: 271 LPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRV 324 + R + G I F ++ L ++ GADG+ H V YG R Sbjct: 472 I-------GRTWQCGTIQLDFQMPERFDL----SYIGADGEKHRPVMVHRTIYG-SVERF 519 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 + +IE +P +AP ++ L+NI D +K+ L + V D Sbjct: 520 IGILIEQYAGA----FPTWLAPVQVKLMNITDSQY---DYLKKVEEALKENNIRVEIDTR 572 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + A L P +I+G K V KV ++ R G +SLEE I + N Sbjct: 573 NEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNEIKN 632 >gi|313159213|gb|EFR58586.1| threonine--tRNA ligase [Alistipes sp. HGB5] Length = 650 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 91/413 (22%), Positives = 161/413 (38%), Gaps = 61/413 (14%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G D + +R Q G ++ P + + +L+V SG Y YGK+ + Sbjct: 260 QGLPLWLPKGAALRDRLEQFLRNVQKEYGYQQVITPHIGNKELYVTSGHYAKYGKDSFQP 319 Query: 97 ADR--NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + + P + +I+RS +SY+ LP + +R E G+ R R Sbjct: 320 IHTPIEGEEYLLKPMNCPHHCEIYRSKPRSYKELPVRLAEFGTVYRYEQSGELHGLTRVR 379 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + P+ + ++ L IF L + + I L Sbjct: 380 GFTQDDAHLF-VRPDQLLEEFERVIDIVLYIFKTLKFDNYTAQ--------------ISL 424 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W +A EK +++ E Sbjct: 425 RDPNNKEKYIGSD-----------------------ENWEKAESAIMQAAEEKGLNTVVE 461 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP T+KGAD K H + + Sbjct: 462 YGEAAFYGPKLDFMVKDAIGRKWQLGTIQVDYNLPERFDLTYKGADDKLHRPIMIHRAPF 521 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G+M AV+ GK +W ++P ++ ++ I + D +++ L++ Sbjct: 522 GSMERFVAVLLEHTGGKFPLW---LSPQQVVVLPI---SEKFNDYAQQVAEYLNRSDVRT 575 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 DD E+IG + +L P +IVG K ++ V ++ + G + M+LE Sbjct: 576 EVDDRNEKIGRKIRDNELKRIPYLLIVGEKEEAEGLVSVRAQGEGDKGQMTLE 628 >gi|225857248|ref|YP_002738759.1| threonyl-tRNA synthetase [Streptococcus pneumoniae P1031] gi|254783542|sp|C1CLX1|SYT_STRZP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225725171|gb|ACO21023.1| threonyl-tRNA synthetase [Streptococcus pneumoniae P1031] Length = 647 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 86/387 (22%), Positives = 156/387 (40%), Gaps = 35/387 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I ++ +G + P L S +L+ SG +D Y ++M Sbjct: 261 QGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPT 320 Query: 97 ADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D D + + P + +F+ H+ SYR LP +I + R E G+ R RE Sbjct: 321 MDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVRE 380 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + D + F +TPE + + + + ++ L R + L Sbjct: 381 MSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR--------------LSLR 425 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPE 273 D +T + D M + D + +N E A Y D+ ++ +L + Sbjct: 426 DPQDTHKYFDNDEMWENAQTMLRAALDEMGVNYFEAEGEAAFYGPKLDI---QIKTALGK 482 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESS 332 + +S ++ F ++ L + GADG+DH M G I M A++ + Sbjct: 483 EETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVISTMERFTAILIEN 534 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 + G W +AP +++LI + V D ++ +L G D+ E++ + Sbjct: 535 YKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRADVDERNEKMQFKI 589 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIK 419 + P Q+IVG K + D V ++ Sbjct: 590 RASQTSKIPYQLIVGDKEMEDETVNVR 616 >gi|313668802|ref|YP_004049086.1| threonyl-tRNA synthetase [Neisseria lactamica ST-640] gi|313006264|emb|CBN87726.1| putative threonyl-tRNA synthetase [Neisseria lactamica 020-06] Length = 637 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 87/398 (21%), Positives = 154/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G V +R+E N G E+ P + W +SG +++Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEKRAGSD 430 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 E A+ G E C ++ + +P E + I +++ W V Sbjct: 431 EVWDKAEQGLREALTACGVEWEE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 488 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 489 PERLNAEYVTENNDRARPVML-------------------------HRAILGSL----ER 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE +H G +W +AP ++ ++NI + D C ++ ARL G V D Sbjct: 520 FIGILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAARLQAAGFRVELDL 572 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 573 RNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|88802133|ref|ZP_01117661.1| prolyl-tRNA synthetase [Polaribacter irgensii 23-P] gi|88782791|gb|EAR13968.1| prolyl-tRNA synthetase [Polaribacter irgensii 23-P] Length = 492 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 71/362 (19%), Positives = 149/362 (41%), Gaps = 79/362 (21%) Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D+ GK + + ++ ++ PT E ++ ++ I+SYR+LP Q R E+R R Sbjct: 102 DNPGKLRVDPDAKLEEELVVRPTSEAIIWSTYKGWIQSYRDLPLLINQWANVVRWEMRTR 161 Query: 147 FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 +R+ EFL ++ ++ T RAE+ + Sbjct: 162 L-FLRTAEFLWQEGHTAHTT-----------------------------RAEAITEAQQM 191 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPI----PSENTDF---DDIISLNSIVEQWTAPYAAT 259 + A+ DFM P+ S++ F +D +++ ++++ Sbjct: 192 QDIYATFAE----------DFMAMPVVKGAKSDSERFAGAEDTLTIEALMQ--------- 232 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 + ++ G + G ++ F +GK YV S+G+ Sbjct: 233 ------------------DGKALQAGTSHFLGQNFAKAFDVKFTSKEGKKEYVWATSWGV 274 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVG 376 + R++ +I + D G++ P +AP ++ ++ I + Q D L G Sbjct: 275 -STRLIGGLIMTHSDDSGLVLPPKLAPIQVVIVPIYKDETQLQAISDKVAMFVKELRAKG 333 Query: 377 CDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 V +DD + G++FA +L G P+++ +GS+ + + VE+ R T ++ ++ +EV+ Sbjct: 334 ASVKFDDRDTYRPGAKFAEYELKGVPVRIAIGSRDLENGTVEVARRDTFEKQTVAQDEVV 393 Query: 436 NY 437 ++ Sbjct: 394 SF 395 >gi|295092070|emb|CBK78177.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Clostridium cf. saccharolyticum K10] Length = 650 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 103/418 (24%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+H G +LP G + + + RE + G +E+S P + + LW SG +D Y Sbjct: 261 MMHDAGPGFPFFLPKGMQLKNTLLDYWREIHKKAGYVEISTPIILNRSLWETSGHWDHYK 320 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M + D D A+ P + ++ S +SYR+LP ++ L R E + G Sbjct: 321 NNMYTTVIDEEDYAI--KPMNCPGGVLVYASEPRSYRDLPLRMGELGLVHRHEKSGQLHG 378 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGD 205 +MR R F DA+ F +TPE K + +++ G K + R E +G D Sbjct: 379 LMRVRCFTQDDAHIF-MTPEQIKDEIKGVATLINQVYTLFGFKYHVELSTRPEDS-MGSD 436 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 E LA G + + D + P D A Y D H E Sbjct: 437 EDWE---LATEG---LRSALDELGLPYVVNEGD--------------GAFYGPKIDFHLE 476 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 +G + GT + LP + GADG+ H + + Sbjct: 477 DC----------------IGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPIMIHRVVF 520 Query: 320 GAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G++ R + +IE +P +AP ++ ++ I D+ D K+Y LS+ G Sbjct: 521 GSIERFIGILIEHFAGA----FPTWLAPVQVKVLPIS--DKYA-DYAAKVYESLSEAGIR 573 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + A P ++VG K + V ++ R G SLE I Sbjct: 574 AEVDTRSEKIGYKIREAQTNKIPYMLVVGQKEEEEGTVSVRSRFAGDEGASSLESFIE 631 >gi|148381087|ref|YP_001255628.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|153932923|ref|YP_001385460.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|153935084|ref|YP_001388867.1| threonyl-tRNA synthetase [Clostridium botulinum A str. Hall] gi|166223333|sp|A7FY87|SYT_CLOB1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223334|sp|A5I6L8|SYT_CLOBH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148290571|emb|CAL84700.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|152928967|gb|ABS34467.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|152930998|gb|ABS36497.1| threonine--tRNA ligase [Clostridium botulinum A str. Hall] Length = 635 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 101/421 (23%), Positives = 163/421 (38%), Gaps = 49/421 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH+ G + P G + + + REE + G E+ P + + LW +SG +D Y K Sbjct: 255 IHEEGPGFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + +D P + ++++ + SYR+LP ++ + R EL G+M Sbjct: 314 ENMYFTNIDDDDYAIKPMNCPGGILVYKNSMHSYRDLPLRLSELGIVHRHELSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ + +T E K + + + F++L E+ Sbjct: 374 RVRCFTQDDAHLY-MTKEQIKEEVVGI-IKLIDKFYKL-----------------FGFEY 414 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 V T S + + D I + E A Y D H L D Sbjct: 415 FVELSTRPEDSMGSDEDWEIATNGLREALDSIGKEYRVNEGDGAFYGPKIDFH---LKDC 471 Query: 271 LPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRV 324 + R + G I F ++ L ++ GADG+ H V YG R Sbjct: 472 I-------GRTWQCGTIQLDFQMPERFDL----SYIGADGEKHRPVMVHRTIYG-SVERF 519 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 + +IE +P +AP ++ L+NI D +K+ L + V D Sbjct: 520 IGILIEQYAGA----FPTWLAPVQVKLMNITDSQY---DYLKKVEEALKENNIRVEIDTR 572 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + A L P +I+G K V KV ++ R G +SLEE I + N Sbjct: 573 NEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNEIKN 632 Query: 445 N 445 Sbjct: 633 K 633 >gi|71029934|ref|XP_764609.1| prolyl-tRNA synthetase [Theileria parva strain Muguga] gi|68351565|gb|EAN32326.1| prolyl-tRNA synthetase, putative [Theileria parva] Length = 461 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 3/172 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S GIY+ LPLG + ++ + I + E + GA ++S P L + +G ++ + Sbjct: 76 SSGIYTTLPLGHRIINRITNIFKVELCKLGAAQLSFPLLNPEKVVSNTGN-TVLDNDLFK 134 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHI--KSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 ++ T E++ + ++ + S LP YQI KFRDELR G +R + Sbjct: 135 VSGNGSVEYRLSGTCEDLCNIVLKNEMIPLSKLQLPVLLYQINTKFRDELRVNEGKVRLK 194 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 EFLM D YS + + S +Y + S+ + LGL + I D Sbjct: 195 EFLMLDMYSLHSSEQCSDSTYTLVLESFANVLRLLGLNFATVNCNKNNIVSD 246 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 5/133 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 S +EVGH+F FGT YS F+ + K + M SYGIG R++ +I + D G Sbjct: 260 SNTELEVGHLFKFGTHYSDVYGLKFEISGRKREKLYMNSYGIGINRLLNVLINNYSDEFG 319 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I P +AP+ +++I D +I L K G V +DD E I ++ + Sbjct: 320 IKLPQLIAPYDVTII-----DSTTNGDGWEITRGLMKKGLTVLYDDRSETIKNKLLDSKR 374 Query: 398 LGFPLQVIVGSKF 410 +G P +I+G+ Sbjct: 375 IGVPHILILGNSL 387 >gi|225855059|ref|YP_002736571.1| threonyl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|237649181|ref|ZP_04523433.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974] gi|237822258|ref|ZP_04598103.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2] gi|254783541|sp|C1CFK0|SYT_STRZJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225723844|gb|ACO19697.1| threonyl-tRNA synthetase [Streptococcus pneumoniae JJA] Length = 647 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 474 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 616 >gi|221232374|ref|YP_002511527.1| threonyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|254783539|sp|B8ZM32|SYT_STRPJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|220674835|emb|CAR69409.1| threonyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] Length = 647 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 474 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGAIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 616 >gi|148994898|ref|ZP_01823919.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|148997679|ref|ZP_01825243.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|149006698|ref|ZP_01830384.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|149021279|ref|ZP_01835525.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|168483499|ref|ZP_02708451.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|168487280|ref|ZP_02711788.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] gi|168488656|ref|ZP_02712855.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|168491490|ref|ZP_02715633.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|168575182|ref|ZP_02721145.1| threonyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|169834472|ref|YP_001695022.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|225859387|ref|YP_002740897.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|225861459|ref|YP_002742968.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298229236|ref|ZP_06962917.1| threonyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254509|ref|ZP_06978095.1| threonyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19A] gi|307068259|ref|YP_003877225.1| threonyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|307127841|ref|YP_003879872.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] gi|238688351|sp|B1I703|SYT_STRPI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783538|sp|C1C8M1|SYT_STRP7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783543|sp|C1CSP6|SYT_STRZT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|147756178|gb|EDK63220.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|147761613|gb|EDK68577.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|147926966|gb|EDK78011.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|147930380|gb|EDK81364.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|168996974|gb|ACA37586.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|172043101|gb|EDT51147.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|183569836|gb|EDT90364.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] gi|183572780|gb|EDT93308.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|183574162|gb|EDT94690.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|183578687|gb|EDT99215.1| threonyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|225720074|gb|ACO15928.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|225727271|gb|ACO23122.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|306409796|gb|ADM85223.1| Threonyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|306484903|gb|ADM91772.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] gi|327389816|gb|EGE88161.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA04375] gi|332072464|gb|EGI82947.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA17570] gi|332072798|gb|EGI83279.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA17545] gi|332073965|gb|EGI84443.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA41301] gi|332199661|gb|EGJ13736.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA41317] gi|332200192|gb|EGJ14265.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA47368] Length = 647 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 474 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 616 >gi|194397191|ref|YP_002038247.1| threonyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|238690846|sp|B5E6Q8|SYT_STRP4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194356858|gb|ACF55306.1| threonyl-tRNA synthetase (thrS) [Streptococcus pneumoniae G54] Length = 647 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 474 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 616 >gi|269214426|ref|ZP_05986526.2| threonine--tRNA ligase [Neisseria lactamica ATCC 23970] gi|269209844|gb|EEZ76299.1| threonine--tRNA ligase [Neisseria lactamica ATCC 23970] Length = 643 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 87/398 (21%), Positives = 154/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G V +R+E N G E+ P + W +SG +++Y Sbjct: 261 LQDEAPGMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKD 320 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 321 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 379 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 380 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPGKRAGSD 436 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 E A+ G E C ++ + +P E + I +++ W V Sbjct: 437 EVWDKAEQGLREALTACGVEWEE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 494 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 495 PERLNAEYVTENNDRARPVML-------------------------HRAILGSL----ER 525 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE +H G +W +AP ++ ++NI + D C ++ ARL G V D Sbjct: 526 FIGILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAARLQAAGFRVELDL 578 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 579 RNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 616 >gi|168493529|ref|ZP_02717672.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|183576436|gb|EDT96964.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] Length = 647 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELEHYIVNKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 474 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 616 >gi|322807831|emb|CBZ05406.1| prolyl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 545 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 50/225 (22%), Positives = 105/225 (46%), Gaps = 22/225 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + L+E+ D E+ S KL+L+ G+I + G+Y++ PLG + L+++ I+ Sbjct: 1 MKLSKTLVHSLREDLADVEMDSQKLLLKGGLIAKVDSGLYAFTPLGYRFLEDIQKIVENN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G ++S+P Y + ++++N+ ++ + +S Sbjct: 61 SKKIGGSQISIP----------------YVNNLEEVSEKNNGFILNFNEETLSFINFLKS 104 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY+ +F + + G+M R+ L ++ + L E K + ++ Sbjct: 105 SVTSYKQLPLFFYENNTEFSYKGKNNLGIMGGRQIL-REYFYMVLDGENDKFNKKELIKL 163 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y IF + L+ + E D + +FI+ + G++ + K Sbjct: 164 YKNIFEIMNLQYNMVEDEL-----DGTIKFIIYNNIGDSHIVACK 203 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 1/136 (0%) Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ATF GK + + ++++ VIE + D GI+WP + FK+ + D Sbjct: 400 CATFIDNKGKSKPFTIYKGFMDIYKIISWVIEQNKDELGIVWPMETSAFKVIVTIANVKD 459 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + EKIY+ L +G DD E+ G +F ADL G P+++ VG K + ++ VEI Sbjct: 460 EQQFKVGEKIYSSLVNIGIGTILDDRKERAGVKFKDADLWGIPIRITVG-KNIKENNVEI 518 Query: 419 KHRLTGIREDMSLEEV 434 K R + ++++ ++++ Sbjct: 519 KLRNSKEKKEIPIDQL 534 >gi|170759933|ref|YP_001788845.1| putative prolyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|169406922|gb|ACA55333.1| putative prolyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] Length = 545 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 51/225 (22%), Positives = 108/225 (48%), Gaps = 22/225 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ + L+E+P D E+ S KL+L+ G+I + G+Y++ PLG L+ + ++ Sbjct: 1 MKLSETLVHSLREDPADIEMDSQKLLLKGGLITKVDSGLYAFTPLGYSFLECIQKVVENN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G ++S+P + + + D K + + N+K +++ + R+ Sbjct: 61 SKKIGGSKISIPYVNNFE--------DVSEKNNEFILNFNEKVLMF--------INFLRN 104 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SY+ LP FY+ ++F + + G+M ++ L + Y L E K + ++ Sbjct: 105 NVTSYKQLPLFFYENNIEFSYKGKNNLGIMSGKQVLREHFYMV-LDEEKDKFNKKELIKL 163 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y IF + L+ + E D + +FI+ + G++ + K Sbjct: 164 YKNIFEIMNLQYNMVEDEL-----DGTIKFIIYNNIGDSSIVACK 203 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 5/138 (3%) Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK--ISLINIKA 356 ATF GK + + ++++ IE + D GI+WP + FK +++ N+K Sbjct: 400 CATFIDNKGKSKAFTIYKGFMDIYKIISWAIEQNKDELGIVWPMETSAFKAIVTIANVKD 459 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 Q EKIY+ L +G DD E+ G +F ADL G P+++ VG K + ++ V Sbjct: 460 EQQF--KVGEKIYSSLVNIGIGTILDDRKERAGVKFKDADLWGIPIRITVG-KNIKENNV 516 Query: 417 EIKHRLTGIREDMSLEEV 434 EIK R + ++++ ++++ Sbjct: 517 EIKLRNSKEKKEIPIDQL 534 >gi|298503373|ref|YP_003725313.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A] gi|298238968|gb|ADI70099.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A] Length = 660 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 267 MISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELYKTSGHWDHY 326 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 327 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 386 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 387 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 434 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 435 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 486 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 487 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVIS 535 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 536 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 590 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 591 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 629 >gi|168179213|ref|ZP_02613877.1| threonyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|182670074|gb|EDT82050.1| threonyl-tRNA synthetase [Clostridium botulinum NCTC 2916] Length = 635 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 101/421 (23%), Positives = 163/421 (38%), Gaps = 49/421 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH+ G + P G + + + REE + G E+ P + + LW +SG +D Y K Sbjct: 255 IHEEGPGFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + +D P + ++++ + SYR+LP ++ + R EL G+M Sbjct: 314 ENMYFTNIDDDDYAIKPMNCPGGILVYKNSMHSYRDLPLRLSELGIVHRHELSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ + +T E K + + + F++L E+ Sbjct: 374 RVRCFTQDDAHLY-MTKEQIKEEVVGI-IKLIDKFYKL-----------------FGFEY 414 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 V T S + + D I + E A Y D H L D Sbjct: 415 FVELSTRPEDSMGSDEDWEIATNGLREALDSIGKEYRVNEGDGAFYGPKIDFH---LKDC 471 Query: 271 LPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRV 324 + R + G I F ++ L ++ GADG+ H V YG R Sbjct: 472 I-------GRTWQCGTIQLDFQMPERFDL----SYIGADGEKHRPVMVHRTIYG-SVERF 519 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 + +IE +P +AP ++ L+NI D +K+ L + V D Sbjct: 520 IGILIEQYAGA----FPTWLAPVQVKLMNITDSQY---DYLKKVEEALKENNIRVEIDTR 572 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + A L P +I+G K V KV ++ R G +SLEE I + N Sbjct: 573 NEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNEIKN 632 Query: 445 N 445 Sbjct: 633 K 633 >gi|326572997|gb|EGE22976.1| threonyl-tRNA synthetase [Moraxella catarrhalis CO72] Length = 639 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 94/415 (22%), Positives = 169/415 (40%), Gaps = 56/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +D+YG+ Sbjct: 255 MQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYGE 314 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M A ++ D A+ P + +F +KSYR+LP + R+E G+ Sbjct: 315 MMFTTASEKRDYAI--KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDL 206 MR R F DA+ F + + + N + ++ L ++ G I M+ + P +G D Sbjct: 373 MRVRGFTQDDAHIFCTNAQIRQEALNFIKLT-LDVYKDFGFDHIQMKLSTRPEKRVGAD- 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 L D E + D +D N D W A + K Sbjct: 431 -----ELWDLAEQAL---ADALD------NAGLD-----------WELQ-AGEGAFYGPK 464 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + SL + +G ++ GT ++LP + A F G G ++ V + +G Sbjct: 465 IEFSLQDC---------IGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILG 515 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + ++ + G ++P +AP ++ ++NI D+ + ++L+ G Sbjct: 516 SFERFIGILIEHYAG---LFPAWLAPQQVVVMNITDKQA---DSVGDVVSKLNAKGYRAI 569 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + L P +I+G K V V ++ R MSL++ I Sbjct: 570 SDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNVRTRTGDNLGSMSLDDFI 624 >gi|301794619|emb|CBW37067.1| threonyl-tRNA synthetase [Streptococcus pneumoniae INV104] Length = 647 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 474 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 616 >gi|327405532|ref|YP_004346370.1| prolyl-tRNA synthetase [Fluviicola taffensis DSM 16823] gi|327321040|gb|AEA45532.1| prolyl-tRNA synthetase [Fluviicola taffensis DSM 16823] Length = 491 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 92/432 (21%), Positives = 174/432 (40%), Gaps = 98/432 (22%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGK 91 H KG+ P G +N+ I+ + TG P L + L E+ + + K Sbjct: 28 HSDVKGMMVIKPYGYAIWENMRDILDAKFKETGHQNAYFPLLIPKSYLSKEASHIEGFAK 87 Query: 92 EML------RLADRN------------DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 E ++D N ++ +I PT E ++ + ++ I+SYR+LP Sbjct: 88 ECAVVTHYRLMSDPNGGGVIVDPSAKLEEELIVRPTSETIIWNSYKKWIQSYRDLPILIN 147 Query: 134 QIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 Q R E++ R +R+ EFL ++ ++ T E + +M Sbjct: 148 QWANVVRWEMKTRL-FLRTSEFLWQEGHTAHATKEEAIKETEQML--------------- 191 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI----PSENTDF---DDIISLN 246 D+ EF ++ +M P+ +E+ F DD + Sbjct: 192 -----------DVYAEF-------------AETYMAMPVIKGHKTESERFAGADDTYCIE 227 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 S+++ A A TS + G ++ + A Sbjct: 228 SMMQDGKALQAGTS---------------------------HFLGQNFAKAFDVKYSDAQ 260 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD---QVCRD 363 GK YV S+G+ + R++ A+I + D +G++ P ++AP ++ ++ I D Q+ D Sbjct: 261 GKLEYVWATSWGV-STRLMGALIMTHSDDEGLVLPPALAPIQVVIVPIYRTDEELQLIND 319 Query: 364 ACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 A KI A L + V +D D ++ G +FA + G P+++ +G + +++ VEI R Sbjct: 320 AVAKITAELKDLKVKVKYDSDDQKRPGWKFAEHEAKGVPVRLAIGPRDLANGVVEIARRD 379 Query: 423 TGIREDMSLEEV 434 T + M+++ + Sbjct: 380 TKEKYAMNIDNI 391 >gi|153814564|ref|ZP_01967232.1| hypothetical protein RUMTOR_00778 [Ruminococcus torques ATCC 27756] gi|317501270|ref|ZP_07959474.1| threonine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|145848058|gb|EDK24976.1| hypothetical protein RUMTOR_00778 [Ruminococcus torques ATCC 27756] gi|316897337|gb|EFV19404.1| threonine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] Length = 641 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 106/442 (23%), Positives = 172/442 (38%), Gaps = 55/442 (12%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y I + RD +L L M+ + G +LP G + + RE R Sbjct: 228 EEYLTMIEEAKKRDHRKLGKELGLF--MMREEGPGFPFFLPNGMVLKNTLLDYWREIHRR 285 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G +E++ P + S LW SG +D Y + M + D D A+ P + ++ S Sbjct: 286 AGYVEINTPIMLSRHLWETSGHWDHYKENMYTTVVDEEDFAI--KPMNCPGGILVYESEP 343 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP ++ L R E + G+MR R F DA+ F +TPE K + Sbjct: 344 RSYRDLPIRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIF-MTPEQIKDEIKGVVKLI 402 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G K + V T S + + + + DD Sbjct: 403 DEVYSLFGFK------------------YHVELSTRPDDSMGSDEDWEMATDALRSALDD 444 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLPM 298 I + E A Y D H E DS +G + GT + LP+ Sbjct: 445 IGLPYIVNEGDGAFYGPKIDFHLE---DS-------------IGRTWQCGTIQLDFQLPL 488 Query: 299 --SATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + GADG+ H + + G++ R + +IE +P +AP ++ ++ I Sbjct: 489 RFELEYTGADGEKHRPIMIHRVVFGSIERFIGILIEHFAGA----FPTWLAPVQVKVLPI 544 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D+ D K+ L + G D E+IG + A + P ++VG+K + Sbjct: 545 S--DKYL-DYAGKVLEDLKEAGIRAEIDSRAEKIGYKIREAQMKKIPYMLVVGAKEEEEG 601 Query: 415 KVEIKHRLTGIREDMSLEEVIN 436 KV ++ R G LEE I Sbjct: 602 KVSVRSRFAGDEGQCGLEEFIE 623 >gi|150025459|ref|YP_001296285.1| prolyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86] gi|166980123|sp|A6GZF3|SYP_FLAPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|149772000|emb|CAL43476.1| Proline--tRNA ligase [Flavobacterium psychrophilum JIP02/86] Length = 492 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 79/361 (21%), Positives = 152/361 (42%), Gaps = 73/361 (20%) Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D GK M+ + ++ +I PT E ++ ++ I+SYR+LP Q R E+R R Sbjct: 102 DKPGKLMVDPNAKLEEELIVRPTSEAIIWSTYKGWIQSYRDLPLLINQWANVVRWEMRTR 161 Query: 147 FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 +R+ EFL ++ ++ T + + KM Y Sbjct: 162 L-FLRTAEFLWQEGHTAHATRKEAIEESEKMMNVY------------------------- 195 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 AD +++FM P+ I L + E+ +A + + Sbjct: 196 -------AD-------FAQNFMAIPV---------IKGLKTETER----FAGAEETY--- 225 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 ++L ++ + ++ G + G ++ F A+GK +V S+G+ + R++ Sbjct: 226 CIEALMQD----GKALQAGTSHFLGQNFAKAFDVKFANAEGKQEHVWGTSWGV-STRLMG 280 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA-------RLSKVGCDV 379 A++ + D G++ P ++AP ++ ++ I D+ EKI A + K+ V Sbjct: 281 ALVMTHSDDNGLVLPPNLAPIQVVIVPIFKTDE----EFEKISALANDLISQFKKLNISV 336 Query: 380 FWDDMGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 +D+ Q G +FA +L G P+++ +G K + + EI R T +E E ++ Y Sbjct: 337 KFDNRTTQKPGFKFAEWELKGVPVRIAIGPKDLENETFEIARRDTLTKEVKPKEGIVKYI 396 Query: 439 S 439 S Sbjct: 397 S 397 >gi|116515338|ref|YP_816901.1| threonyl-tRNA synthetase [Streptococcus pneumoniae D39] gi|161410743|ref|NP_359065.2| threonyl-tRNA synthetase [Streptococcus pneumoniae R6] gi|73621971|sp|Q8DNX8|SYT_STRR6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122278253|sp|Q04JD7|SYT_STRP2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116075914|gb|ABJ53634.1| threonyl-tRNA synthetase [Streptococcus pneumoniae D39] Length = 647 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 474 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 616 >gi|226950568|ref|YP_002805659.1| threonine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] gi|254783516|sp|C1FKN0|SYT_CLOBJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226841746|gb|ACO84412.1| threonine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] Length = 635 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 101/421 (23%), Positives = 163/421 (38%), Gaps = 49/421 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH+ G + P G + + + REE + G E+ P + + LW +SG +D Y K Sbjct: 255 IHEEGPGFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + +D P + ++++ + SYR+LP ++ + R EL G+M Sbjct: 314 ENMYFTNIDDGDYAIKPMNCPGGILVYKNSMHSYRDLPLRLSELGIVHRHELSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ + +T E K + + + F++L E+ Sbjct: 374 RVRCFTQDDAHLY-MTKEQIKEEIVGI-IKLIDKFYKL-----------------FGFEY 414 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 V T S + + D I + E A Y D H L D Sbjct: 415 FVELSTRPEDSMGSDEDWEIATNGLREALDSIGKEYRVNEGDGAFYGPKIDFH---LKDC 471 Query: 271 LPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRV 324 + R + G I F ++ L ++ GADG+ H V YG R Sbjct: 472 I-------GRTWQCGTIQLDFQMPERFDL----SYIGADGEKHRPVMVHRTIYG-SVERF 519 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 + +IE +P +AP ++ L+NI D +K+ L + V D Sbjct: 520 IGILIEQYAGA----FPTWLAPVQVKLMNITDSQY---DYLKKVEEALKENNIRVEIDTR 572 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + A L P +I+G K V KV ++ R G +SLEE I + N Sbjct: 573 NEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNEIKN 632 Query: 445 N 445 Sbjct: 633 K 633 >gi|89101224|ref|ZP_01174050.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89084053|gb|EAR63228.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 408 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 91/400 (22%), Positives = 172/400 (43%), Gaps = 36/400 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G V I +++ R G + P + + +L+ SG +D Y ++M + Sbjct: 29 QGLPMWLPKGATIRRIVERYIVDKEQRLGYEHVYTPVMANVELYKTSGHWDHYQEDMFPV 88 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I+++ I SYR LP ++ R E+ G+ R R Sbjct: 89 MEMDNEELVLRPMNCPHHMMIYKNSIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 148 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ L ++ ++ R LS+ D Sbjct: 149 TLNDAHIF-VRPDQIKEEFKRVVHLILEVYKDFNIEDYSFR---------LSYR-----D 193 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + + D M S + D + L+ E A Y DV + +L + Sbjct: 194 PQDTEKYFNDDEMWEKAQSMLKEAMDELGLDYYEAEGEAAFYGPKLDV---MVKTALGKE 250 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L ++ G DGK H + G+ + R VA +IE Sbjct: 251 ETLSTAQLD----FLLPERFDL----SYVGEDGKQHRPVVIHRGVVSTMERFVAFLIE-- 300 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 + KG +P +AP ++ +I + D +K+ L G V D E+IG + Sbjct: 301 -EYKG-AFPTWLAPVQVQVIPVSPDAHF--DYAKKVQEELQAQGYRVELDARNEKIGYKI 356 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 A + P +++G K VSD+ V ++ E MS + Sbjct: 357 REAQMQKIPYMLVLGDKEVSDNAVNVRKYGEQKSETMSFD 396 >gi|15459130|gb|AAL00276.1| Threonyl-tRNA synthetase 1 [Streptococcus pneumoniae R6] Length = 660 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 267 MISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPLASVELYKTSGHWDHY 326 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 327 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 386 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 387 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 434 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 435 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 486 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 487 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVIS 535 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 536 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 590 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 591 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 629 >gi|288818602|ref|YP_003432950.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|288788002|dbj|BAI69749.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|308752193|gb|ADO45676.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] Length = 637 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 99/420 (23%), Positives = 164/420 (39%), Gaps = 53/420 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + REE + G + P + +A LW SG D Y M Sbjct: 261 GLVLWLPKGGIYRKILEDYWREEHLKRGYQFVYTPHIGNAKLWQISGHLDYYRPNMFSSM 320 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + P + I++S ++SY+ LP ++ +R E+ G+MR R F Sbjct: 321 QVDQEEYFVKPMNCPFHIAIYKSKVRSYKELPLKLAELGTVYRYEMSGVLHGLMRVRGFT 380 Query: 157 MKDAY--SFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 DA+ + E H + +S LR F G + EF V Sbjct: 381 QDDAHIICTEEQVEDVIHQTLEFAISMLRDF---GFE-----------------EFKVYI 420 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T S D +EN SL VE PY D + + Sbjct: 421 STKPEDAIGSPDQWQL---AEN-------SLKKAVESMGIPYQI--DEGGGAFYGPKIDV 468 Query: 275 KRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAV 328 K A +G ++ T ++LP + G D K H M + G++ + Sbjct: 469 KIKDA----IGRLWQCSTIQFDFNLPERFDMEYVGPDNKRHRPYMIHRALLGSIERFTGI 524 Query: 329 IESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 + + G +W ++P ++ LI I +AH D +K+ RL + G V DD E+ Sbjct: 525 LLEHYAGALPVW---LSPVQVRLIPIGEAH----MDYTKKLENRLKEEGLRVEVDDRDER 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 + ++ A++ P +++G K VS K+ ++ + G MS+EE I + + + P Sbjct: 578 LSAKIRDAEVQKIPYVIVIGDKEVSQGKISVRSKKEGNLGSMSVEEFIKHIKDKIKSKAP 637 >gi|261402296|ref|YP_003246520.1| prolyl-tRNA synthetase [Methanocaldococcus vulcanius M7] gi|261369289|gb|ACX72038.1| prolyl-tRNA synthetase [Methanocaldococcus vulcanius M7] Length = 464 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 104/431 (24%), Positives = 159/431 (36%), Gaps = 95/431 (22%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL----------------W 80 KG +LP G K +IR+ + TG E P L DL W Sbjct: 33 KGCGVYLPYGFKIRRYAFELIRKLLDETGHDETLFPMLIPEDLLAKEAEHIKGFEDEVYW 92 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 V G GK L D + PT E + + R +K + +LP YQI FR Sbjct: 93 VTHG-----GKTPL------DVKLALRPTSETPIYYMMRLWVKVHTDLPIKVYQIVNTFR 141 Query: 141 DELRPRFGVMRSREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 E + ++R RE + K+A++ T E ++ + Y + F LG IP Sbjct: 142 YETKHTRPLIRLREIMTFKEAHTAHSTKEEAEKQVEEAISIYKKFFDVLG---IPHLVSK 198 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 P ++ FP FD I +++ Sbjct: 199 RP------------------------EWDKFPGAEYTMAFDTIFPDGRVMQ--------I 226 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 + VHN G +S F+ G + YGI Sbjct: 227 ATVHN-------------------------LGQNFSKTFEIIFETPTGDKDFAYQTCYGI 261 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGC 377 RV+A++I D KG+I P VAP +I ++ + K ++ + ++IY RL K Sbjct: 262 SD-RVIASIIAIHGDEKGLILPPVVAPLQIVIVPLIFKGKKEIVMEKSKEIYERL-KDKY 319 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR---EDMSLEEV 434 V+ DD + G +F ++ G PL++ VG K + K+ I R T + ED LE+ Sbjct: 320 RVYIDDRDIRPGKKFYDWEIKGVPLRIEVGPKDIESGKITIFRRDTMEKFQVEDEQLEDE 379 Query: 435 INYASHRFSNN 445 I + N Sbjct: 380 IEKTLNNIMEN 390 >gi|15901467|ref|NP_346071.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|111657539|ref|ZP_01408280.1| hypothetical protein SpneT_02001261 [Streptococcus pneumoniae TIGR4] gi|149011514|ref|ZP_01832761.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|303253984|ref|ZP_07340104.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|303258557|ref|ZP_07344537.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|303262647|ref|ZP_07348587.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|303263586|ref|ZP_07349508.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|303266970|ref|ZP_07352845.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|303269866|ref|ZP_07355610.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|22654131|sp|Q97PI4|SYT_STRPN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|14973120|gb|AAK75711.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|147764504|gb|EDK71435.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|301802334|emb|CBW35088.1| threonyl-tRNA synthetase [Streptococcus pneumoniae INV200] gi|302599072|gb|EFL66098.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|302636203|gb|EFL66698.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|302640058|gb|EFL70513.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|302640601|gb|EFL71004.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|302643487|gb|EFL73759.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|302646624|gb|EFL76849.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS397] Length = 647 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 474 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 616 >gi|257455909|ref|ZP_05621126.1| threonyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] gi|257446655|gb|EEV21681.1| threonyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] Length = 642 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 88/398 (22%), Positives = 161/398 (40%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +++YG Sbjct: 255 MQEEAPGMVFWHPNGWTMWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWENYGD 314 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M +++ D A+ P + +F +KSYR+LP + R+E G+ Sbjct: 315 MMFTTHSEKRDYAI--KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F DA+ F + E K L ++ G + M+ + P E Sbjct: 373 MRVRGFTQDDAHIF-CSNEQIKQEAQDFIKLTLDVYKDFGFDDVQMKLSTRP-------E 424 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 V AD E KD D +L++ W + K+ Sbjct: 425 KRVGAD--ELWDLAEKDLAD--------------ALDNAGLDWQY-LPGEGAFYGPKIEF 467 Query: 270 SLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMR 323 SL + +G ++ GT ++LP + A F G ++ V + +G+ Sbjct: 468 SLKDC---------LGRVWQCGTLQLDFNLPERLGAEFVNEQGERERPVMLHRAILGSFE 518 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +W +AP ++ ++NI + AC+K+ +L++ G V D Sbjct: 519 RFIGMLIEHYAGWMPVW---LAPQQVVVMNITDNQA---PACQKVAEQLNQAGLRVITDL 572 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P +++G K V ++V ++ R Sbjct: 573 RNEKIGFKIRERTLERIPYMIVMGDKEVESNQVNVRTR 610 >gi|289192180|ref|YP_003458121.1| prolyl-tRNA synthetase [Methanocaldococcus sp. FS406-22] gi|288938630|gb|ADC69385.1| prolyl-tRNA synthetase [Methanocaldococcus sp. FS406-22] Length = 455 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 97/420 (23%), Positives = 162/420 (38%), Gaps = 73/420 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG +LP G K IIR+ + +G E P L DL E+ + E+ Sbjct: 24 KGCGVYLPYGFKIRRYTFEIIRKLLDESGHDETLFPMLIPEDLLAKEAEHIKGFEDEVYW 83 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D + PT E + + + +K + +LP YQI FR E + ++R Sbjct: 84 VTHGGKTPLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKVYQIVNTFRYETKHTRPLIR 143 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE + K+A++ T E ++ + Y + F LG IP P Sbjct: 144 LREIMTFKEAHTAHSTKEEAEEQVKQAISIYKKFFDTLG---IPYLISKRP--------- 191 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ FP FD I +++ + VHN Sbjct: 192 ---------------EWDKFPGAEYTMAFDTIFPDGRVMQ--------IATVHN------ 222 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 G +S F+ G Y YGI RV+A++I Sbjct: 223 -------------------LGQNFSKTFEILFETPTGGKDYAYQTCYGISD-RVIASIIA 262 Query: 331 SSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 D KG+I P VAP +I ++ + K ++V + +++Y +L K V+ DD + Sbjct: 263 IHGDEKGLILPPIVAPIQIVIVPLIFKGKEEVVMEKAKELYEKL-KGKYRVYIDDRDIRP 321 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR---EDMSLEEVINYASHRFSNN 445 G +F ++ G PL++ +G K + + K+ + R T + ++ LEEVI + N Sbjct: 322 GRKFNDWEIKGVPLRIEIGPKDIENKKITLFRRDTMEKFQVDETQLEEVIEKTLNNIMEN 381 >gi|306829065|ref|ZP_07462255.1| threonine--tRNA ligase [Streptococcus mitis ATCC 6249] gi|304428151|gb|EFM31241.1| threonine--tRNA ligase [Streptococcus mitis ATCC 6249] Length = 647 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDCGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|283797704|ref|ZP_06346857.1| threonine--tRNA ligase [Clostridium sp. M62/1] gi|291074600|gb|EFE11964.1| threonine--tRNA ligase [Clostridium sp. M62/1] Length = 650 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 103/418 (24%), Positives = 162/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+H G +LP G + + + RE + G +E+S P + + LW SG +D Y Sbjct: 261 MMHDAGPGFPFFLPKGMQLKNTLLDYWREIHKKAGYVEISTPIILNRSLWETSGHWDHYK 320 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M + D D A+ P + ++ S +SYR+LP ++ L R E + G Sbjct: 321 NNMYTTVIDEEDYAI--KPMNCPGGVLVYASEPRSYRDLPLRMGELGLVHRHEKSGQLHG 378 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGD 205 +MR R F DA+ F +TPE K + ++ G K + R E +G D Sbjct: 379 LMRVRCFTQDDAHIF-MTPEQIKDEIKGVATLINEVYTLFGFKYHVELSTRPEDS-MGSD 436 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 E LA G + + D + P D A Y D H E Sbjct: 437 EDWE---LATEG---LRSALDELGLPYVVNEGD--------------GAFYGPKIDFHLE 476 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 +G + GT + LP + GADG+ H + + Sbjct: 477 DC----------------IGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPIMIHRVVF 520 Query: 320 GAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G++ R + +IE +P +AP ++ ++ I D+ D K+Y LS+ G Sbjct: 521 GSIERFIGILIEHFAGA----FPTWLAPVQVKVLPIS--DKYA-DYAAKVYESLSEAGIR 573 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + A P ++VG K + V ++ R G SLE I Sbjct: 574 AEVDTRSEKIGYKIREAQTNKIPYMLVVGQKEEEEGTVSVRSRFAGDEGASSLESFIE 631 >gi|146319020|ref|YP_001198732.1| threonyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|146321228|ref|YP_001200939.1| threonyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|253752085|ref|YP_003025226.1| threonyl-tRNA synthetase [Streptococcus suis SC84] gi|253753910|ref|YP_003027051.1| threonyl-tRNA synthetase [Streptococcus suis P1/7] gi|166225507|sp|A4W2F0|SYT_STRS2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225509|sp|A4VW43|SYT_STRSY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145689826|gb|ABP90332.1| Threonyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|145692034|gb|ABP92539.1| Threonyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|251816374|emb|CAZ52005.1| threonyl-tRNA synthetase [Streptococcus suis SC84] gi|251820156|emb|CAR46495.1| threonyl-tRNA synthetase [Streptococcus suis P1/7] gi|292558668|gb|ADE31669.1| Threonyl-tRNA synthetase [Streptococcus suis GZ1] gi|319758452|gb|ADV70394.1| threonyl-tRNA synthetase [Streptococcus suis JS14] Length = 650 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 87/412 (21%), Positives = 173/412 (41%), Gaps = 36/412 (8%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++H++SYR LP ++ + R E Sbjct: 314 SEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPVRIAELGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDL 206 G+ R RE + D + F +TPE + + K + ++ L R + P + Sbjct: 374 GLQRVREMTLNDGHIF-VTPEQIQEEFKKALQLIIDVYADFNLNDYRFRLSYRDPEDKEK 432 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 ++ + + + + + D M D+ + E A Y D+ + Sbjct: 433 YYDNDEMWENAQRMLKGAMDEM-------GVDYFE-------AEGEAAFYGPKLDI---Q 475 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVV 325 + +L + +S ++ F ++ L T+ GADG++H M G I M Sbjct: 476 VKTALGNEETLSTIQLD----FLLPERFGL----TYIGADGEEHRPVMIHRGVISTMERF 527 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A++ ++ G W +AP ++++I I + D K+ L G V D+ Sbjct: 528 TAILIETYKGAFPTW---LAPTQVTMIPISVEAHL--DYAWKVAKELQDRGVRVHVDERN 582 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 E++ + + P Q+IVG K + D+ V ++ + + S+ E +++ Sbjct: 583 EKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQSVSEFVDH 634 >gi|331089982|ref|ZP_08338872.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] gi|330402896|gb|EGG82462.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] Length = 641 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 100/415 (24%), Positives = 163/415 (39%), Gaps = 53/415 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ + G +LP G + + RE R G +E++ P + S LW SG +D Y Sbjct: 253 MMREEGPGFPFFLPNGMVLKNTLLDYWREIHRRAGYVEINTPIMLSRHLWETSGHWDHYK 312 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M + D D A+ P + ++ S +SYR+LP ++ L R E + G Sbjct: 313 ENMYTTVVDEEDFAI--KPMNCPGGILVYESEPRSYRDLPIRMGELGLVHRHEKSGQLHG 370 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 +MR R F DA+ F +TPE K + ++ G K Sbjct: 371 LMRVRCFTQDDAHIF-MTPEQIKDEIKGVVKLIDEVYSLFGFK----------------- 412 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + V T S + + + + DDI + E A Y D H E Sbjct: 413 -YHVELSTRPDDSMGSDEDWEMATDALRSALDDIGLPYIVNEGDGAFYGPKIDFHLE--- 468 Query: 269 DSLPENKRVSARGIEVGHIFYFGT---KYSLPM--SATFKGADGKDHY-VQMGSYGIGAM 322 DS +G + GT + LP+ + GADG+ H + + G++ Sbjct: 469 DS-------------IGRTWQCGTIQLDFQLPLRFELEYTGADGEKHRPIMIHRVVFGSI 515 Query: 323 -RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 R + +IE +P +AP ++ ++ I D+ D K+ L + G Sbjct: 516 ERFIGILIEHFAGA----FPTWLAPVQVKVLPIS--DKYL-DYAGKVLEDLKEAGIRAEI 568 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + A + P ++VG+K + KV ++ R G LEE I Sbjct: 569 DSRAEKIGYKIREAQMKKIPYMLVVGAKEEEEGKVSVRSRFVGDEGQCGLEEFIE 623 >gi|218438366|ref|YP_002376695.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7424] gi|218171094|gb|ACK69827.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7424] Length = 608 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 94/423 (22%), Positives = 177/423 (41%), Gaps = 56/423 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ W P G + +++EQ + G + + P + DL+ SG + +Y ++M + Sbjct: 222 GLPLWTPKGAIIRSTLEDFLKKEQIKRGYLPVVTPHIARIDLFKISGHWQNYKEDMFPMM 281 Query: 97 -----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 + N+ + P + I++S ++SYR+LP + +R E G+ Sbjct: 282 AEDQESALNEMGFVLKPMNCPFHIQIYKSELRSYRDLPMRLAEFGTVYRYEQSGELGGLT 341 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR------AESGPIGG 204 R R F + D++ F +TPE + + + L +F+ L LK+ R A IGG Sbjct: 342 RVRGFTVDDSHLF-VTPEQLEEEFLSVVDLILSVFNSLQLKNFKARLSFRDPASDKYIGG 400 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 D D +EN + LN +E + AP A + Sbjct: 401 D-----------------------DVWNKAENAIRSAVQKLN--MEHFEAPGEAA--FYG 433 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGA 321 KL D + K R ++G + Y+LP + DG + V + G+ Sbjct: 434 PKL-DFI--FKDALEREWQLGTV---QVDYNLPERFDLEYVAEDGTRKRPVMIHRAPFGS 487 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + + ++ + G +W +AP ++ L+ + + Q+ D +++ A++ G Sbjct: 488 LERLVGILIEEYAGDFPLW---LAPIQVRLLPV-SDPQL--DYAKQVAAQMRSQGIRAEA 541 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 D GE++G A+ P+ +VG+K V + + I+ R +G M++ EVI + Sbjct: 542 DTSGERLGKMIRNAEKQKIPVMGVVGAKEVESNTLSIRTRASGELGTMAVNEVIEKVTEA 601 Query: 442 FSN 444 +N Sbjct: 602 IAN 604 >gi|225571168|ref|ZP_03780166.1| hypothetical protein CLOHYLEM_07256 [Clostridium hylemonae DSM 15053] gi|225159999|gb|EEG72618.1| hypothetical protein CLOHYLEM_07256 [Clostridium hylemonae DSM 15053] Length = 480 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 94/438 (21%), Positives = 176/438 (40%), Gaps = 87/438 (19%) Query: 14 NPRDAEIAS-HKLMLRTGMIHQHS--KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 PRD + A + ++R + +S KG ++LP G + + A + + TG + Sbjct: 12 TPRDEDFAQWYTDVVREAELCDYSSVKGCLNYLPNGYAIWELIQADLDKRFKETGVENVY 71 Query: 71 VPTLQSADLW-VESGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +PTL +L E+ + + E+ + +R + + PT E + D++ ++SY Sbjct: 72 LPTLIPENLLEKEADHVEGFAPEVAWVTHGGMERLQERLCIRPTSETLFCDLWSKTVQSY 131 Query: 126 RNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 R+LP + Q L++ RP +RSREFL ++ ++ T Y + ++ Sbjct: 132 RDLPKVWNQWNSVLRWEKTTRP---FLRSREFLWQEGHTLHAT-------YEEAEERTIQ 181 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS----ENTDF 239 +FH V D C K+ + P S E+ F Sbjct: 182 MFH-------------------------VYED-------CYKETLAIPFVSGRKAEHEKF 209 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 D ++ +++ A +ATS +FG+ + Sbjct: 210 AGAQDTYTIEALMHDGKALQSATS---------------------------HFFGSGFPD 242 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + + + H S+G + R + A+I D G++ P VAP + +I I Sbjct: 243 AFDIKYVDKNNQLHSAYETSWG-WSTRSIGAIIMVHGDDSGLVLPPHVAPVECRIIPIAQ 301 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 H + D + L K G V DD + G +F+ ++LG P ++ +G K + ++V Sbjct: 302 HKEGVLDRANVLLDELKKAGYRVKIDDSEKSPGWKFSEQEMLGIPTRIEIGPKDIEKNQV 361 Query: 417 EIKHRLTGIREDMSLEEV 434 + R T + +SL+E+ Sbjct: 362 VVVRRDTREKIIVSLDEI 379 >gi|149001905|ref|ZP_01826859.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|147759714|gb|EDK66704.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] Length = 435 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 42 MISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELYKTSGHWDHY 101 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 102 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 161 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 162 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 209 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 210 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 261 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 262 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVIS 310 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 311 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 365 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 366 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 404 >gi|182684576|ref|YP_001836323.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|182629910|gb|ACB90858.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] Length = 660 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 267 MISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPLASVELYKTSGHWDHY 326 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 327 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 386 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 387 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 434 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 435 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 486 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 487 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVIS 535 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 536 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 590 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 591 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 629 >gi|313677792|ref|YP_004055788.1| prolyl-tRNA synthetase [Marivirga tractuosa DSM 4126] gi|312944490|gb|ADR23680.1| prolyl-tRNA synthetase [Marivirga tractuosa DSM 4126] Length = 491 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 71/336 (21%), Positives = 143/336 (42%), Gaps = 65/336 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +R+ ++SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 115 EEELIVRPTSETIIWNTYRNWVQSYRDLPLLINQWANVVRWEMRTRL-FLRTAEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T + + +M Y D + EF+ L Sbjct: 174 HTAHATKQEAIEETERMINIY----------------------ADFAEEFMAL------- 204 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 P+ I L S E+ +A + + + L ++ + Sbjct: 205 ----------PV---------IKGLKSESER----FAGALETY---CIEGLMQD----GK 234 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ F +GK +V S+G+ + R++ A++ + D +G++ Sbjct: 235 ALQAGTSHFLGQNFAKAFDVKFATKEGKQEFVWGTSWGV-STRLMGALVMAHSDDEGLVL 293 Query: 341 PDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 P +AP ++ ++ I D Q + E + L K V +DD + G +FA + Sbjct: 294 PPRLAPIQVVIVPIYKTDEEQQKITEVAENLRKSLKKKRITVKFDDRDTHKPGFKFAEWE 353 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 L G PL++ +G + + + VE+ R T ++ +S+E Sbjct: 354 LKGVPLRIAIGPRDLDNGTVELARRDTKEKQTVSIE 389 >gi|326574765|gb|EGE24699.1| threonyl-tRNA synthetase [Moraxella catarrhalis O35E] Length = 639 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 93/415 (22%), Positives = 170/415 (40%), Gaps = 56/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +D+YG+ Sbjct: 255 MQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYGE 314 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M A ++ D A+ P + +F +KSYR+LP + R+E G+ Sbjct: 315 MMFTTASEKRDYAI--KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDL 206 MR R F DA+ F + + + N + ++ L ++ G I M+ + P +G D Sbjct: 373 MRVRGFTQDDAHIFCTNAQIRQEALNFIKLT-LDVYKDFGFDHIQMKLSTRPEKRVGAD- 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 L D E + D +D N D W A + K Sbjct: 431 -----ELWDLAEQAL---ADALD------NAGLD-----------WELQ-AGEGAFYGPK 464 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + SL + +G ++ GT ++LP ++A F G G ++ V + +G Sbjct: 465 IEFSLQDC---------IGRVWQCGTLQLDFNLPERLNAEFVGESGERERPVMLHRAILG 515 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + ++ + G ++P +AP ++ ++NI D+ + ++L+ G Sbjct: 516 SFERFIGILIEHYAG---LFPTWLAPQQVVVMNITDKQA---DSVGDVVSKLNAKGYRAI 569 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + L P +I+G K V V ++ R M+L++ I Sbjct: 570 SDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNVRTRTGDNLGSMNLDDFI 624 >gi|283769478|ref|ZP_06342374.1| threonine--tRNA ligase [Bulleidia extructa W1219] gi|283103746|gb|EFC05132.1| threonine--tRNA ligase [Bulleidia extructa W1219] Length = 584 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 99/442 (22%), Positives = 180/442 (40%), Gaps = 66/442 (14%) Query: 15 PRDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIR 58 P D E+ ++ +L H K G+ WLP G ++ I Sbjct: 163 PTDTELEAYLQVLEEAKERDHRKLGKDLKMFLFSETVGSGLPMWLPNGFTVRRLLSDYIM 222 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 E++ G + P++ S L+ SG Y ++M + +R+ + + P + I+ Sbjct: 223 EKEIALGYEHVLTPSVASTKLYEVSGHLAHYQEDMFPIMERDGDSYVLRPMNCPEHMIIY 282 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++ + SYR+LP +I FR E G+ RSR F D++ F L P+ + Sbjct: 283 KASLHSYRDLPVRIAEIAHDFRFEASGALTGIERSRSFTQNDSHIF-LRPDQIAEEIKNV 341 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L +++ G K R + L D T + D D SEN Sbjct: 342 TKLILDVYNDFGFKDYSFR--------------LSLRDLNNTDKYFGND--DLWTRSEN- 384 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KY 294 L ++++ PY + E F + +V + +GH T Y Sbjct: 385 ------ELREVLKEMKVPYY---EAEGEAAFYGPKIDVQVKS---ALGHDVTLSTIQLDY 432 Query: 295 SLPMSATFKGADGKDHYVQ---MGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKIS 350 LP + + + V+ + +G++ R VA ++E + KG++ P +AP ++ Sbjct: 433 QLPERFELEYVNKDNQKVRPVVIHRAILGSLDRFVAFLLEET---KGVL-PLWLAPLQVE 488 Query: 351 LI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 +I N +AH D KI L + G DD E++G + A + P+Q++VG+ Sbjct: 489 VIPVNSEAHG----DYASKINRALKREGIRSHLDDRNEKLGYRIREAQMNKVPIQIVVGN 544 Query: 409 KFVSDSKVEIKHRLTGIREDMS 430 + + + V + R G +E+++ Sbjct: 545 RDIENETVTV--RTYGSKEEVT 564 >gi|315612715|ref|ZP_07887626.1| threonine--tRNA ligase [Streptococcus sanguinis ATCC 49296] gi|315314825|gb|EFU62866.1| threonine--tRNA ligase [Streptococcus sanguinis ATCC 49296] Length = 647 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDCGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|307150016|ref|YP_003885400.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7822] gi|306980244|gb|ADN12125.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7822] Length = 608 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 93/428 (21%), Positives = 179/428 (41%), Gaps = 64/428 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +++EQ + G + + P L DL+ SG + +Y ++M + Sbjct: 222 GLPLWTPKGTIIRTTLEEFLKKEQVKRGYLPVVTPHLARVDLFKISGHWQNYKEDMFPMM 281 Query: 98 DRNDKAMIY------GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 ++++ ++ P + I++S ++SYR+LP + +R E G+ Sbjct: 282 AEDEESALHEIGFVLKPMNCPFHIQIYKSELRSYRDLPMRLAEFGTVYRYEQSGELGGLT 341 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR------AESGPIGG 204 R R F + D++ F +TPE + + + L +F L LK+ R A IGG Sbjct: 342 RVRGFTVDDSHLF-VTPEQLEEEFLSVVDLILSVFKSLQLKNFKARLSFRDPASDKYIGG 400 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 D D +EN + +N +E + AP A + Sbjct: 401 D-----------------------DVWNKAENAIRSAVQKMN--MEHFEAPGEAA--FYG 433 Query: 265 EKL----FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSY 317 KL D+L R ++G + Y+LP + DG + V + Sbjct: 434 PKLDFIFQDAL-------EREWQLGTV---QVDYNLPERFDLEYVAEDGSRKRPVMIHRA 483 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ + ++ + G +W +AP ++ L+ + + Q+ D +++ A+L G Sbjct: 484 PFGSLERLVGILIEEYAGDFPLW---LAPIQVRLLPV-SDPQL--DFAKEVAAQLLSQGI 537 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D GE++G A+ P+ +VG+K V + + I+ R +G +++ EVI Sbjct: 538 RAEADTSGERLGKMIRNAEKQKIPVMAVVGAKEVESNTLSIRTRASGELGTIAVSEVIEK 597 Query: 438 ASHRFSNN 445 + +N+ Sbjct: 598 VTEAITNH 605 >gi|253755215|ref|YP_003028355.1| threonyl-tRNA synthetase [Streptococcus suis BM407] gi|251817679|emb|CAZ55427.1| threonyl-tRNA synthetase [Streptococcus suis BM407] Length = 650 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 87/412 (21%), Positives = 173/412 (41%), Gaps = 36/412 (8%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++H++SYR LP ++ + R E Sbjct: 314 SEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPVRIAELGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDL 206 G+ R RE + D + F +TPE + + K + ++ L R + P + Sbjct: 374 GLQRVREMTLNDGHIF-VTPEQIQEEFKKALQLIIDVYADFNLNDYRFRLSYRDPEDKEK 432 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 ++ + + + + + D M D+ + E A Y D+ + Sbjct: 433 YYDNDEMWENAQRMLKGAMDEM-------GVDYFE-------AEGEAAFYGPKLDI---Q 475 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVV 325 + +L + +S ++ F ++ L T+ GADG++H M G I M Sbjct: 476 VKTALGNEETLSTIQLD----FLLPERFGL----TYIGADGEEHRPVMIHRGVISTMERF 527 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A++ ++ G W +AP ++++I I + D K+ L G V D+ Sbjct: 528 TAILIETYKGAFPTW---LAPTQVTMIPISVEAHL--DYAWKVAKELQDRGVRVHVDERN 582 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 E++ + + P Q+IVG K + D+ V ++ + + S+ E +++ Sbjct: 583 EKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQSVSEFVDH 634 >gi|66806197|ref|XP_636821.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4] gi|74852684|sp|Q54J66|SYTC1_DICDI RecName: Full=Probable threonyl-tRNA synthetase 1, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|60465220|gb|EAL63315.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 710 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 102/431 (23%), Positives = 183/431 (42%), Gaps = 50/431 (11%) Query: 16 RDAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 R+A + H+ + + + H +S G +LP G + + + IREE +R G E+ P Sbjct: 310 REAALRDHRNVGKAQELFFFHPYSPGSAFFLPHGTRIYNKLVEFIREEYHRRGFTEVISP 369 Query: 73 TLQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 ++ S LW +SG + Y + M L D+++ ++ P + +F S +SYR LP Sbjct: 370 SIFSQKLWEQSGHWQKYSENMFVLPVDKDNFSL--KPMNCPGHCLMFGSRQRSYRELPLR 427 Query: 132 FYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F + R+EL G+ R R+F DA+ F T E + N LG Sbjct: 428 FADFGVLHRNELAGALTGLTRVRKFQQDDAHIF-CTTEMIEDEINSC----------LGF 476 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADT--GETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 M+ G G + E D GE + D + + F LN Sbjct: 477 ----MQYVYGIFGFEFGLELSTRPDNFLGEIAQW---DIAEASLEKALNKFGKPWKLNP- 528 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A Y D+H + D L + + + ++ F +Y +A K Sbjct: 529 --KDGAFYGPKIDIH---ITDCLKRSHQCATIQLDFQLPIRFDLEYQSDDAAELKKRPVI 583 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEK 367 H +GS R++A +IE + G WP V+P + ++ + K H++ + C++ Sbjct: 584 IHRAILGS----VERMMAILIEHT----GGKWPLWVSPRQAIVVTVNKTHNEYGQKVCKE 635 Query: 368 IYARLSKVG--CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 I S G CD+ DD + I + A L + ++VG + ++ + V ++ R + Sbjct: 636 I----SDAGFYCDI--DDSDKTISKKVREAQLAQYNYILVVGQEEINGNTVNVRTRDNVV 689 Query: 426 REDMSLEEVIN 436 R +++ ++I+ Sbjct: 690 RGSLTVNDLIS 700 >gi|325261340|ref|ZP_08128078.1| proline--tRNA ligase [Clostridium sp. D5] gi|324032794|gb|EGB94071.1| proline--tRNA ligase [Clostridium sp. D5] Length = 480 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 84/406 (20%), Positives = 167/406 (41%), Gaps = 72/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG ++LP G +N+ + + + TG + +P L A L ES + + E+ Sbjct: 38 KGCLNYLPNGYAIWENIQSDLDKRFKDTGVENVYLPVLIPEALLQKESDHIEGFAPEVAW 97 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + +R + PT E + D++ ++SYR+LP + Q L++ RP Sbjct: 98 VTHGGLERLQERFCIRPTSETLFCDLWSKTVQSYRDLPKVWNQWCSVLRWEKTTRP---F 154 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +RSREFL ++ ++ T E ++ +++ MR D+ + Sbjct: 155 LRSREFLWQEGHTIHATYEEAEQ------------------RTLTMR--------DVYRD 188 Query: 210 FIVLADTGETQVFCSKDFMDFPIPS-ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FI +D + P+ S T+ + Y + +H+ K Sbjct: 189 FI-------------QDDLAIPLLSGRKTESEKFAGAQDT-------YTVEALMHDGKAL 228 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 S + +FG+ + + + + H V S+G+ + R++ A+ Sbjct: 229 QSATSH--------------FFGSSFPDAFDIKYADKNNELHSVYETSWGL-STRIIGAI 273 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P +AP + +I I H + D ++ L G DD + Sbjct: 274 IMVHGDDSGLVLPPRIAPVQTRVIPIAQHKEGVLDKANELLDVLKAAGYKAKIDDSEKSP 333 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F+ ++LG P ++ +G K + +++V + R T + +S++E+ Sbjct: 334 GWKFSEQEMLGIPTRIEIGPKDIENNQVVVVRRDTREKIVVSIDEI 379 >gi|332876867|ref|ZP_08444621.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685150|gb|EGJ57993.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 492 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/355 (20%), Positives = 146/355 (41%), Gaps = 65/355 (18%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GK ++ + ++ +I PT E ++ +++ I+SYR+LP Q R E+R R Sbjct: 105 GKLIVDPEAKLEEELIVRPTSESIIWSTYKNWIQSYRDLPILINQWANVVRWEMRTRL-F 163 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E + +M Y ++P Sbjct: 164 LRTAEFLWQEGHTAHATKEEAIEESERMMNVYANFVE--NFMAVP--------------- 206 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 ++ ET+ F D+ + ++++ A A TS Sbjct: 207 -VIRGFKTETERFAGA--------------DETYCIEAMMQDGKALQAGTSH-------- 243 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 + G ++ + DGK YV S+G+ + R++ A+I Sbjct: 244 -------------------FLGQNFAKAFDVKYATKDGKQEYVWASSWGV-STRLMGALI 283 Query: 330 ESSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + D G++ P ++AP ++ ++ I A + R+ + L K G V +DD Sbjct: 284 MTHSDDNGLVLPPNLAPIQVVIVPIYKGAAQLESVRERISPLMEALRKQGISVKFDDRDT 343 Query: 387 QI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 Q G +F +L G P+++ VG + + ++ E+ R T +E +S +++I + + Sbjct: 344 QSPGFKFHEYELKGVPVRLAVGQRDLENNTFEVARRDTLTKETVSGDDIIAHIAQ 398 >gi|312132188|ref|YP_003999528.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Leadbetterella byssophila DSM 17132] gi|311908734|gb|ADQ19175.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Leadbetterella byssophila DSM 17132] Length = 650 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 90/431 (20%), Positives = 171/431 (39%), Gaps = 63/431 (14%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM--- 93 KG+ WLP G + + ++ Q R+G + + P + S L+V SG +D YG++ Sbjct: 262 KGLPLWLPKGAMLRERLENFLKRAQLRSGYLPVVTPHIGSKQLYVTSGHWDKYGEDSFQP 321 Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ + ++ M+ P + +IF+S +SYR+LP + +R E G+ R Sbjct: 322 IKTPEEGEEFML-KPMNCPHHCEIFKSKPRSYRDLPLRLAEFGTVYRYEQSGELHGLTRV 380 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F + + + K+ L +F LG D S + + Sbjct: 381 RGFTQDDAHIF-CANDQVEDEFKKVIDLVLYVFKSLGFD-------------DYSAQVSL 426 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 + ++ S E W A + EK ++ Sbjct: 427 RSLENRSKYIGSD------------------------EDWDKAEKAIVNAAAEKGLKTVV 462 Query: 273 ENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYG 318 E + G + +G + GT Y+LP + G+D + H V + Sbjct: 463 EYGEAAFYGPKLDFMVKDALGRKWQLGTIQVDYNLPKRFDLEYVGSDNQKHRPVMIHRAP 522 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G+M A++ + G W ++P +I+++ I + D +++ L + Sbjct: 523 FGSMERFIAILLENTAGNFPFW---LSPEQIAVLPI---SEKYEDFANEVFLILQENDIR 576 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 + D E+I + A++ PL +IVG K + +V ++ + G S++E I +A Sbjct: 577 GYIDHRAEKISRKIRDAEVAKVPLMLIVGEKEQEEGRVSVRKKGEGDLGSFSVQEFIEFA 636 Query: 439 SHRFSNNRPVL 449 + + N P Sbjct: 637 KNEINKNIPTF 647 >gi|302024085|ref|ZP_07249296.1| threonyl-tRNA synthetase [Streptococcus suis 05HAS68] gi|330832440|ref|YP_004401265.1| threonyl-tRNA synthetase [Streptococcus suis ST3] gi|329306663|gb|AEB81079.1| threonyl-tRNA synthetase [Streptococcus suis ST3] Length = 649 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 87/412 (21%), Positives = 173/412 (41%), Gaps = 36/412 (8%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRTLERYITDKELTSGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++H++SYR LP ++ + R E Sbjct: 314 SEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPVRIAELGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDL 206 G+ R RE + D + F +TPE + + K + ++ L R + P + Sbjct: 374 GLQRVREMTLNDGHIF-VTPEQIQEEFKKALQLIIDVYADFNLNDYRFRLSYRDPEDKEK 432 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 ++ + + + + + D M D+ + E A Y D+ + Sbjct: 433 YYDNDEMWENAQRMLKGAMDEM-------GVDYFE-------AEGEAAFYGPKLDI---Q 475 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVV 325 + +L + +S ++ F ++ L T+ GADG++H M G I M Sbjct: 476 VKTALGNEETLSTIQLD----FLLPERFGL----TYIGADGEEHRPVMIHRGVISTMERF 527 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A++ ++ G W +AP ++++I I + D K+ L G V D+ Sbjct: 528 TAILIETYKGAFPTW---LAPTQVTMIPISVEAHL--DYAWKVAKELQDRGVRVHVDERN 582 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 E++ + + P Q+IVG K + D+ V ++ + + S+ E +++ Sbjct: 583 EKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQSVAEFVDH 634 >gi|212550458|ref|YP_002308775.1| prolyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|259511574|sp|B6YQ92|SYP_AZOPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|212548696|dbj|BAG83364.1| prolyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 493 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/348 (18%), Positives = 144/348 (41%), Gaps = 65/348 (18%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + ++ I SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEELIIRPTSESIIWNTYKKWIHSYRDLPILINQWANVVRWEMRTRL-FLRTAEFLWQEG 176 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ + E + K+ Y + +++ + T + Sbjct: 177 HTAHTSKEEAIEETLKILDIY----------------------ANFVEQYMAIPVTKGVK 214 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 C + +A +D + ++L ++ + Sbjct: 215 TPCER------------------------------FAGATDTY---CIETLMQD----GK 237 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ F GK YV S+G+ + R++ A+I D G++ Sbjct: 238 ALQAGTSHFLGQNFAKAFDVQFLNKKGKREYVWATSWGV-STRLMGALIMMHSDDNGLVL 296 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 P +AP +I +I + D EK I + +V +D+ ++ G +FA + Sbjct: 297 PPKLAPCQIVIIPVSKDRTSLEDINEKATNIINDFKNLDINVKYDNTDNKKPGWKFAEYE 356 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 L G P+++ +G++ + + +E+ R T +E +S+ + +YA++ ++ Sbjct: 357 LKGIPIRLTLGTRDLENGTIEVSRRDTLTKETISINNITDYANNLLND 404 >gi|331266854|ref|YP_004326484.1| threonyl-tRNA synthetase [Streptococcus oralis Uo5] gi|326683526|emb|CBZ01144.1| threonyl-tRNA synthetase [Streptococcus oralis Uo5] Length = 647 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLNEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|153938058|ref|YP_001392415.1| threonyl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|166223335|sp|A7GI05|SYT_CLOBL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|152933954|gb|ABS39452.1| threonine--tRNA ligase [Clostridium botulinum F str. Langeland] gi|295320405|gb|ADG00783.1| threonine--tRNA ligase [Clostridium botulinum F str. 230613] Length = 635 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 101/421 (23%), Positives = 163/421 (38%), Gaps = 49/421 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH+ G + P G + + + RE+ + G E+ P + + LW +SG +D Y K Sbjct: 255 IHEEGPGFPFFHPKGMIVRNILESFWREKHTKAGYQEIRTPLILNEALWHQSGHWDHY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + +D P + +++S + SYR+LP ++ + R EL G+M Sbjct: 314 ENMYFTNIDDGDYAIKPMNCPGGILVYKSSMHSYRDLPLRLSELGIVHRHELSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ + +T E K + + + F++L E+ Sbjct: 374 RVRCFTQDDAHLY-MTKEQIKEEVIGI-IKLIDEFYKL-----------------FGFEY 414 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 V T S + + D I + E A Y D H L D Sbjct: 415 FVELSTRPEDSMGSDEDWEIATNGLREALDSIGKEYRVNEGDGAFYGPKIDFH---LKDC 471 Query: 271 LPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRV 324 + R + G I F ++ L ++ GADG+ H V YG R Sbjct: 472 I-------GRTWQCGTIQLDFQMPERFDL----SYIGADGEKHRPVMVHRTIYG-SVERF 519 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 + +IE +P +AP ++ L+NI D +K+ L + V D Sbjct: 520 IGILIEQYAGA----FPTWLAPVQVKLMNITDSQY---DYLKKVEETLKENNIRVEIDTR 572 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + A L P +I+G K V KV ++ R G +SLEE I + N Sbjct: 573 NEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNEIKN 632 Query: 445 N 445 Sbjct: 633 K 633 >gi|326571308|gb|EGE21325.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC8] Length = 639 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 93/415 (22%), Positives = 170/415 (40%), Gaps = 56/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +D+YG+ Sbjct: 255 MQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYGE 314 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M A ++ D A+ P + +F +KSYR+LP + R+E G+ Sbjct: 315 MMFTTASEKRDYAI--KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDL 206 MR R F DA+ F + + + N + ++ L ++ G I M+ + P +G D Sbjct: 373 MRVRGFTQDDAHIFCTNAQIRQEALNFIKLT-LDVYKDFGFDHIQMKLSTRPEKRVGAD- 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 L D E + D +D N D W A + K Sbjct: 431 -----ELWDLAEQAL---ADALD------NAGLD-----------WELQ-AGEGAFYGPK 464 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + SL + +G ++ GT ++LP ++A F G G ++ V + +G Sbjct: 465 IEFSLQDC---------IGRVWQCGTLQLDFNLPERLNAEFVGESGERERPVMLHRAILG 515 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + ++ + G ++P +AP ++ ++NI D+ + ++L+ G Sbjct: 516 SFERFIGILIEHYAG---LFPTWLAPQQVVVMNITDKQA---DSVGDVVSKLNAKGYRAI 569 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + L P +I+G K V V ++ R M+L++ I Sbjct: 570 SDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNVRTRTGDNLGSMNLDDFI 624 >gi|326562407|gb|EGE12726.1| threonyl-tRNA synthetase [Moraxella catarrhalis 7169] gi|326569116|gb|EGE19178.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC1] Length = 639 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 94/415 (22%), Positives = 169/415 (40%), Gaps = 56/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +D+YG+ Sbjct: 255 MQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYGE 314 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M A ++ D A+ P + +F +KSYR+LP + R+E G+ Sbjct: 315 MMFTTASEKRDYAI--KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDL 206 MR R F DA+ F + + + N + ++ L ++ G I M+ + P +G D Sbjct: 373 MRVRGFTQDDAHIFCTNAQIRQEALNFIKLT-LDVYKDFGFDHIQMKLSTRPEKRVGAD- 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 L D E + D +D N D W A + K Sbjct: 431 -----ELWDLAEQAL---ADALD------NAGLD-----------WELQ-AGEGAFYGPK 464 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + SL + +G ++ GT ++LP + A F G G ++ V + +G Sbjct: 465 IEFSLQDC---------IGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILG 515 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + ++ + G ++P +AP ++ ++NI D+ + ++L+ G Sbjct: 516 SFERFIGILIEHYAG---LFPAWLAPQQVVVMNITDKQA---DSVGDVVSKLNAKGYRAI 569 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + L P +I+G K V V ++ R MSL++ I Sbjct: 570 SDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNVRTRAGENLGSMSLDDFI 624 >gi|15678639|ref|NP_275754.1| prolyl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] gi|3334356|sp|O26708|SYP_METTH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|2621691|gb|AAB85117.1| prolyl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] Length = 482 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 95/415 (22%), Positives = 160/415 (38%), Gaps = 78/415 (18%) Query: 23 HKLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-L 79 H ++ +I Q KG++ W+P G N I+R +R E+ P L D L Sbjct: 25 HNILEEAEIIDQRYPVKGMHVWMPHGFMIRKNTLKILRRILDRDHE-EVLFPLLVPEDEL 83 Query: 80 WVESGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 E+ + E+ + + + + PT E VM +F ++S+ +LP FYQ+ Sbjct: 84 AKEAIHVKGFEDEVYWVTHGGLSKLQRKLALRPTSETVMYPMFALWVRSHTDLPMRFYQV 143 Query: 136 QLKFRDELRPRFGVMRSREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 FR E + ++R RE K+A++ T ++ + Y F+ LG+ + Sbjct: 144 VNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIYKEFFNSLGIPYLI 203 Query: 195 MRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 R + FP FD ++ ++ T Sbjct: 204 TR---------------------------RPPWDKFPGSEYTVAFDTLMPDGKTLQIGT- 235 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF--YFGTKYSLPMSATFKGADGKDHYV 312 VHN +G F F K+ P +G YV Sbjct: 236 -------VHN-------------------LGQTFARTFEIKFETP--------EGDHEYV 261 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIY 369 YG+ RV+A+VI D G+ P VA ++ ++ I KA ++V +AC ++ Sbjct: 262 HQTCYGLSD-RVIASVIAIHGDESGLCLPPDVAAHQVVIVPIIFKKAAEEVM-EACRELR 319 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +RL G V DD + G ++ ++ G PL+V +G + + I R TG Sbjct: 320 SRLEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTG 374 >gi|70953193|ref|XP_745713.1| prolyl-t-RNA synthase [Plasmodium chabaudi chabaudi] gi|56526123|emb|CAH76923.1| prolyl-t-RNA synthase, putative [Plasmodium chabaudi chabaudi] Length = 498 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 24/234 (10%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 F I +N + + +L+ R I + + G+Y+ LPLG + ++ + I + + Sbjct: 12 FNRIFNDNVKQNGDKASELLFRANYIKEIN-GLYNMLPLGLRVINKIKDFINNYLEKINS 70 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRN-----------------DKAMIYGPT 109 + + LQ LW S R Y +E L + + D I PT Sbjct: 71 HSVFLSILQPKRLWNISDRSKLYSEEFLYVYKQKQQKVDTDIGESVKKKFEDDGNILSPT 130 Query: 110 HEE----VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDL 165 EE ++ +I+ + + ++ P +Q KFR+E R + +S+EFLMKD YSF Sbjct: 131 CEESALTLINEIYNLNA-TEKHFPLLIHQYNYKFRNEKRLEKSLFKSKEFLMKDGYSFHT 189 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGE 218 + Y Y IF++LGLK +I + + + SHE+ +L G+ Sbjct: 190 NEKCMNEIYEIYKECYNNIFNKLGLKYNIIKKRKKDKMNALESHEYQILCRDGK 243 >gi|288927557|ref|ZP_06421404.1| proline--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] gi|288330391|gb|EFC68975.1| proline--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] Length = 493 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 74/336 (22%), Positives = 143/336 (42%), Gaps = 65/336 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ +I PT E ++ + +++ I S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 118 DEELIIRPTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMRTR-PFLRTSEFLWQEG 176 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E ++ KM Y + Sbjct: 177 HTAHATREEAEEEAKKMLDVYAKF------------------------------------ 200 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 ++D+M P+ + + S E+ +A D + E + Sbjct: 201 ---AQDWMAVPV---------VCGVKSETER----FAGALDTYT-------IEAMMQDGK 237 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ TF + K YV S+G+ + R++ A+I + D G++ Sbjct: 238 ALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGV-STRLIGALIMTHSDDNGLVL 296 Query: 341 PDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 P +AP ++ +I I KA Q+ D + + +L K G V +DD + G ++A + Sbjct: 297 PPKLAPIQVVVIPIGKAGQQMQAIADKLQPVIEQLRKAGVTVKYDDSDNRRPGFKYADYE 356 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 L G P+++++G + + ++ VEI R T +E + E Sbjct: 357 LKGIPVRIVMGGRDLENNTVEIMRRDTLEKETIGFE 392 >gi|322388243|ref|ZP_08061847.1| threonine--tRNA ligase [Streptococcus infantis ATCC 700779] gi|321140915|gb|EFX36416.1| threonine--tRNA ligase [Streptococcus infantis ATCC 700779] Length = 647 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLNEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDGTVNVR 616 >gi|291515296|emb|CBK64506.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Alistipes shahii WAL 8301] Length = 604 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 92/413 (22%), Positives = 160/413 (38%), Gaps = 61/413 (14%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G D + +R Q G ++ P + + +L+V SG Y YGK+ + Sbjct: 214 QGLPLWLPKGAALRDRLEQFLRGVQKEYGYQQVITPHIGNKELYVTSGHYAKYGKDSFQP 273 Query: 97 ADR--NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + + P + +I+RS +SY+ LP + +R E G+ R R Sbjct: 274 IHTPIEGEEYLLKPMNCPHHCEIYRSKPRSYKELPVRLAEFGTVYRYEQSGELHGLTRVR 333 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + P+ + ++ L IF L + + I L Sbjct: 334 GFTQDDAHLF-VRPDQLLEEFERVIDIVLYIFKTLKFDNYTAQ--------------ISL 378 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W +A EK ++ E Sbjct: 379 RDPNNKEKYIGSD-----------------------ENWEKAESAIMQAAKEKGLTTVVE 415 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP T+KGAD + H + + Sbjct: 416 LGEAAFYGPKLDFMVKDAIGRKWQLGTIQVDYNLPERFDLTYKGADDRLHRPIMIHRAPF 475 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G+M AV+ GK +W ++P ++ ++ I + D +K+ L++ Sbjct: 476 GSMERFVAVLLEHTGGKFPLW---LSPQQVVVLPI---SEKFNDYAQKVSEFLNRSDVRT 529 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 DD E+IG + +L P +IVG K ++ V ++ + G + MSLE Sbjct: 530 EVDDRNEKIGRKIRDNELKRIPYLLIVGEKEEAEGLVSVRAQGEGDKGQMSLE 582 >gi|170754255|ref|YP_001782772.1| threonyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|229557978|sp|B1IMV3|SYT_CLOBK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169119467|gb|ACA43303.1| threonyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] Length = 635 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 107/437 (24%), Positives = 173/437 (39%), Gaps = 52/437 (11%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH+ G + P G + + + REE + G Sbjct: 231 YLNMLEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIVRNILESFWREEHTKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y KE + + +D P + ++++ + SY Sbjct: 289 YQEIRTPLILNEALWHQSGHWDHY-KENMYFTNIDDGDYAIKPMNCPGGILVYKNSMHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ + R EL G+MR R F DA+ + +T E K + + + Sbjct: 348 RDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLY-MTKEQIKEEVVGI-IKLIDK 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F++L E+ V T S + + D I Sbjct: 406 FYKL-----------------FGFEYFVELSTRPEDSMGSDEDWEIATNGLKEALDSIGK 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSAT 301 + E A Y D H L D + R + G I F ++ L + Sbjct: 449 EYRVNEGDGAFYGPKIDFH---LKDCI-------GRTWQCGTIQLDFQMPERFDL----S 494 Query: 302 FKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + GADG+ H V YG R + +IE +P +AP ++ L+NI Sbjct: 495 YIGADGEKHRPVMVHRTIYG-SVERFIGILIEQYAGA----FPTWLAPVQVKLMNIT--- 546 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D +K+ L + V D E+IG + A L P +I+G K V KV + Sbjct: 547 DAQYDYLKKVEETLKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAV 606 Query: 419 KHRLTGIREDMSLEEVI 435 + R G +SLEE I Sbjct: 607 RSRKDGDLGAISLEEFI 623 >gi|322374759|ref|ZP_08049273.1| threonine--tRNA ligase [Streptococcus sp. C300] gi|321280259|gb|EFX57298.1| threonine--tRNA ligase [Streptococcus sp. C300] Length = 647 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|309378779|emb|CBX22605.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 637 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 87/398 (21%), Positives = 153/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G V +R+E N G E+ P + W +SG +++Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + +N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARVFNELLV---RIYKQFGFHDVSVKLSLRPGKRAGSD 430 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 E A+ G E C ++ + +P E + I +++ W V Sbjct: 431 EVWDKAEQGLREALTACGVEWEE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 488 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 489 PERLNAEYVTENNDRARPVML-------------------------HRAILGSL----ER 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE +H G +W +AP ++ ++NI + D C ++ ARL G V D Sbjct: 520 FIGILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAARLQAAGFRVELDL 572 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 573 RNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|228478293|ref|ZP_04062901.1| threonyl-tRNA synthetase [Streptococcus salivarius SK126] gi|228249972|gb|EEK09242.1| threonyl-tRNA synthetase [Streptococcus salivarius SK126] Length = 648 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 89/394 (22%), Positives = 164/394 (41%), Gaps = 36/394 (9%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P + S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRVLERYIVDKEVAAGYQHVYTPPIASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D +A + P + ++++ H+ SYR LP +I + R E Sbjct: 314 REDMFPTMDMGDGEAFVLRPMNCPHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D ++F +TPE K + + + ++ L R LS Sbjct: 374 GLQRVREMSLNDGHTF-VTPEQIKDEFQRTLQLIIDVYEDFNLTDYRFR---------LS 423 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEK 266 + D +T + D M S D + L+ E A Y D+ + Sbjct: 424 YR-----DPKDTHKYFDNDEMWENAQSMLKSAMDDMELDYFEAEGEAAFYGPKLDI---Q 475 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVV 325 + +L + +S ++ F ++ L + GADG++H M G I M Sbjct: 476 VKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVISTMERF 527 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A++ ++ G W +AP ++++I + ++ D ++ +L G V D+ Sbjct: 528 TAILIENYKGAFPTW---LAPQQVTVIPVS--NEAHTDYAWEVAKQLRDRGIRVEVDERN 582 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E++ + + P Q+IVG K + D V ++ Sbjct: 583 EKMQYKIRASQTQKIPYQLIVGDKEMEDGTVNVR 616 >gi|331003535|ref|ZP_08327032.1| prolyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] gi|330412376|gb|EGG91767.1| prolyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] Length = 479 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 1/166 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YFG ++ TF D + V S+G+ R++ AVI D G+ Sbjct: 225 GKALQSGTSHYFGDGFAKAFDVTFTDKDNQIKTVFETSFGV-TTRIIGAVIMVHGDDSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 P +AP ++++I + AH + +A + RL G V DD + G +FA +++ Sbjct: 284 KLPPHIAPVQVNIIPVAAHKEGVLEAANDLKNRLIAAGVRVKLDDSEKSPGFKFAESEMR 343 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL++ +G K + +++ R TG + +SLE V N A N Sbjct: 344 GIPLRIEIGPKDIENNQCVFVRRDTGEKTFVSLENVENDAKECLEN 389 Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust. Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 11/171 (6%) Query: 25 LMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVE 82 ++L+ ++ S KG P G +N+ I TG +P + + L E Sbjct: 25 IVLKAELVDYTSVKGCLVIRPAGYAIWENMKNEIDRRFKETGIENCYLPMFIPESLLQKE 84 Query: 83 SGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ-- 136 + + + E+ + + ++ + PT E + D + +KSYR+LP Q Sbjct: 85 ADHVEGFAPEVAWVTHGGLEELEERLCVRPTSETLFCDYYSKVVKSYRDLPQLLNQWCSV 144 Query: 137 LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 +++ RP +RSREFL ++ ++ T + + +M Y F + Sbjct: 145 VRWEKTTRP---FLRSREFLWQEGHTIHATAKEAHDRTVQMLEVYADFFEK 192 >gi|147918785|ref|YP_687490.1| prolyl-tRNA synthetase [uncultured methanogenic archaeon RC-I] gi|121690208|sp|Q0W0C9|SYP_UNCMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|110622886|emb|CAJ38164.1| prolyl-tRNA synthetase [uncultured methanogenic archaeon RC-I] Length = 474 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 84/406 (20%), Positives = 164/406 (40%), Gaps = 75/406 (18%) Query: 37 KGIYSWLPLG---QKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 KG+Y W P G +K + N+ + + ++ M +P +L ES + E+ Sbjct: 35 KGVYVWYPFGFSIRKKVYNMLRNLLDVDHQETYFPMLIP---KPELLKESEHIKGFEDEV 91 Query: 94 LRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 + + + PT E + +++ I+S+ +LP YQI FR E + + Sbjct: 92 YWVTHGGLSELEVPLALRPTSETAIYPMYKLWIRSHADLPLKLYQIVNTFRYETKHTRPL 151 Query: 150 MRSREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 +R RE K+A++ T + ++ ++ Y F +L ++P P Sbjct: 152 IRLREITSFKEAHTAHATWDDAEKQVHEAMDLYSEFFTKL---AVPFIVHKRP------- 201 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 ++ FP FD + Sbjct: 202 -----------------EWDKFPGADYTMAFDTM-------------------------- 218 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 +P+ K ++VG + + GTK++ T++ G+ YV YGI R +AAV Sbjct: 219 --MPDGK-----SLQVGTVHHLGTKFAKTYDITYEDEKGERQYVNQTCYGISE-RCIAAV 270 Query: 329 IESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 I D KG++ P + + ++ +I I K D ++AC+K+ L DD E Sbjct: 271 IGIHGDNKGLVLPPNASQTQVVIIPIIFKKDDGGVKEACQKVKELLRANDIVAVIDDADE 330 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G+++ ++ G P ++ +G + + ++ V + R G +E + ++ Sbjct: 331 RPGAKYYKWEMKGTPFRIEIGPRDIKNNSVMLVRR-DGKKESIPMD 375 >gi|167766936|ref|ZP_02438989.1| hypothetical protein CLOSS21_01453 [Clostridium sp. SS2/1] gi|167710911|gb|EDS21490.1| hypothetical protein CLOSS21_01453 [Clostridium sp. SS2/1] Length = 645 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 100/429 (23%), Positives = 168/429 (39%), Gaps = 55/429 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ + G +LP G + + RE + G +E+S P + S LW SG +D Y Sbjct: 257 MMREEGPGFPFFLPKGMVLKNTLLDYWREIHQKAGYVEISTPIMLSRHLWETSGHWDHY- 315 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +D+ P + ++ S +SYR+LP ++ L R E + G+ Sbjct: 316 KENMYTTVIDDQDFAIKPMNCPGGVLVYDSEPRSYRDLPLRMGELGLVHRHEKSGQLHGL 375 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F DA+ F +TP+ K + ++++ G K Sbjct: 376 MRVRCFTQDDAHIF-MTPDQIKDEIKGVAGLIDQVYNLFGFK------------------ 416 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT-APYAATSDVHNEKLF 268 + V T S + + S DD + L+ +V + A Y D H E Sbjct: 417 YHVELSTRPDDSMGSDEDWELATDSLRAALDD-LGLDYVVNEGDGAFYGPKIDFHLE--- 472 Query: 269 DSLPENKRVSARGIEVGHIFYFGT---KYSLPM--SATFKGADGKDHY-VQMGSYGIGAM 322 DS +G + GT + LP+ + GADG+ H + + G++ Sbjct: 473 DS-------------IGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRVAFGSI 519 Query: 323 -RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 R + +IE +P +AP ++ +I I D K+ L G Sbjct: 520 ERFIGILIEHFAGA----FPTWLAPVQVEVIPISDKH---LDYANKVLDTLKAAGIRADI 572 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 D E++G + A L P ++VG K + V ++ R G M L++ ++ Sbjct: 573 DTRAEKMGYKIREAQLQKIPYMLVVGGKEEENEAVSVRSRFKGDEGQMKLDDFLDAIKEE 632 Query: 442 FSN--NRPV 448 +N NR V Sbjct: 633 IANRENRKV 641 >gi|307709563|ref|ZP_07646017.1| threonyl-tRNA synthetase [Streptococcus mitis SK564] gi|307619694|gb|EFN98816.1| threonyl-tRNA synthetase [Streptococcus mitis SK564] Length = 647 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|326570601|gb|EGE20637.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC7] Length = 639 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 93/415 (22%), Positives = 170/415 (40%), Gaps = 56/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +D+YG+ Sbjct: 255 MQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYGE 314 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M A ++ D A+ P + +F +KSYR+LP + R+E G+ Sbjct: 315 MMFTTASEKRDYAI--KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDL 206 MR R F DA+ F + + + N + ++ L ++ G I M+ + P +G D Sbjct: 373 MRVRGFTQDDAHIFCTNAQIRQEALNFIKLT-LDVYKDFGFDHIQMKLSTRPEKRVGAD- 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 L D E + D +D N D W A + K Sbjct: 431 -----ELWDLAEQAL---ADALD------NAGLD-----------WELQ-AGEGAFYGPK 464 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + SL + +G ++ GT ++LP ++A F G G ++ V + +G Sbjct: 465 IEFSLQDC---------IGRVWQCGTLQLDFNLPERLNAEFVGESGERERPVMLHRAILG 515 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + ++ + G ++P +AP ++ ++NI D+ + ++L+ G Sbjct: 516 SFERFIGILIEHYAG---LFPAWLAPQQVVVMNITDKQA---DSVGDVVSKLNAKGYRAI 569 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + L P +I+G K V V ++ R M+L++ I Sbjct: 570 SDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNVRTRTGENLGSMNLDDFI 624 >gi|293364941|ref|ZP_06611658.1| threonine--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307703194|ref|ZP_07640140.1| threonyl-tRNA synthetase [Streptococcus oralis ATCC 35037] gi|291316391|gb|EFE56827.1| threonine--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307623269|gb|EFO02260.1| threonyl-tRNA synthetase [Streptococcus oralis ATCC 35037] Length = 647 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|307707001|ref|ZP_07643798.1| threonyl-tRNA synthetase [Streptococcus mitis SK321] gi|307617527|gb|EFN96697.1| threonyl-tRNA synthetase [Streptococcus mitis SK321] Length = 647 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|294670480|ref|ZP_06735360.1| hypothetical protein NEIELOOT_02198 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307759|gb|EFE49002.1| hypothetical protein NEIELOOT_02198 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 637 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/398 (21%), Positives = 155/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S+ Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEKRAGSN 430 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 + A+ G E C ++ + +P E + I +++ W V Sbjct: 431 DVWDKAEQGLREALTACGVEWDE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 488 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 489 PERLDAEYVTENNDRARPVML-------------------------HRAILGSL----ER 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE +H G +W +AP ++ ++NI + D C ++ A+L G V D Sbjct: 520 FIGILIE-NHAGSFPLW---LAPAQMVIMNITENQA---DYCREVAAKLQAAGFRVELDL 572 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 573 RNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|213024072|ref|ZP_03338519.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 60 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 32/60 (53%), Positives = 42/60 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 >gi|116626061|ref|YP_828217.1| anticodon-binding domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116229223|gb|ABJ87932.1| Anticodon-binding domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 480 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 77/193 (39%), Gaps = 55/193 (28%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+P L+ENP DAE S +L++R G G+Y WLPLGQ+A+ + I R+E Sbjct: 7 MRWSRLFIPTLRENPADAETVSQQLLVRAGYARAVKTGVYGWLPLGQRAMAKIQRIARQE 66 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ L +AD +I R Sbjct: 67 LTALGGQEVG---LDAAD-----------------------------------AAEIGRG 88 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+ ++LP +++++ +R R+F D Y F M Sbjct: 89 EIRGAKSLPQIWFRVEAPL----------LRRRQFAGLDVYGF-------GEDAGAMREC 131 Query: 181 YLRIFHRLGLKSI 193 + RI R G+ ++ Sbjct: 132 FQRILDRCGVSAL 144 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G Y + R++ IE+ +D G+ P VAPF + + A D +A E+IYA + Sbjct: 354 GLYRLALDRILTTAIEAGNDKDGMALPAGVAPFDVVVSVAVAGDAAQMEAAERIYAECTA 413 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G D+ +DD E+ G +F ADL+G P +V VG K ++ VE+ R T + + + V Sbjct: 414 AGMDLLFDDRDERPGVKFKDADLIGVPWRVTVGKK-IAGGLVELVERKTKVVTAVPIASV 472 Query: 435 IN 436 + Sbjct: 473 ME 474 >gi|332827078|gb|EGJ99863.1| prolyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286] Length = 493 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/336 (19%), Positives = 149/336 (44%), Gaps = 65/336 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +R+ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEELIVRPTSETIIWNTYRNWIQSYRDLPILVNQWANVVRWEMRTRL-FLRTAEFLWQEG 176 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E ++ +M Y + Sbjct: 177 HTAHATREEAEAETIQMLNVYAQF------------------------------------ 200 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 ++++M P+ I + S E+ +A D + +++ ++ + Sbjct: 201 ---AEEYMAMPV---------IKGVKSASER----FAGAVDTYT---IEAMMQD----GK 237 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ F +GK +V S+G+ + R++ A+I + D G++ Sbjct: 238 ALQSGTSHFLGQNFAKAFDVRFADKEGKMEHVWATSWGV-STRLIGALIMAHSDDNGLVL 296 Query: 341 PDSVAPFKISLINIKAHDQ---VCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 P +APF++ ++ I D+ + + + + L +G V +D+ ++ G +F+ + Sbjct: 297 PPKLAPFQVVIVPIYKGDEQLALINEKVDGLVKSLKALGISVKYDNADNKKPGWKFSEYE 356 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 L G P+++ +G++ + ++ VE+ R T +E +S + Sbjct: 357 LKGVPVRLAMGARDMENNTVEVARRDTLTKETVSCD 392 >gi|15674621|ref|NP_268795.1| threonyl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|71910240|ref|YP_281790.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] gi|22654136|sp|Q9A115|SYT_STRP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|13621733|gb|AAK33516.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes M1 GAS] gi|71853022|gb|AAZ51045.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] Length = 647 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 169/415 (40%), Gaps = 46/415 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 252 MISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWDHY 311 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M + D D + + P + ++++H++SYR LP ++ + R E Sbjct: 312 QEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPIRIAELGMMHRYEKSGALS 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 372 GLQRVREMTLNDGHIF-VTPEQIQEEFQRALQLIIDVYADFNLTDYRFR---------LS 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + D +T + D M EN +L+ + E A Y D Sbjct: 422 YR-----DPNDTHKYYDNDEM-----WENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLD 471 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 472 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 520 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 521 TMERFTAILIETYKGAFPTW---LAPHQVTVIPISNEAHI--DYAWEVAKTLRDRGVRAD 575 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E++ + + P Q+IVG K + D V ++ + S+EE + Sbjct: 576 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKTTHTESVEEFV 630 >gi|213961830|ref|ZP_03390096.1| prolyl-tRNA synthetase [Capnocytophaga sputigena Capno] gi|213955619|gb|EEB66935.1| prolyl-tRNA synthetase [Capnocytophaga sputigena Capno] Length = 492 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/353 (20%), Positives = 144/353 (40%), Gaps = 71/353 (20%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GK ++ + ++ +I PT E ++ +++ I+SYR+LP Q R E+R R Sbjct: 105 GKLIVDPEAKLEEELIVRPTSEAIIWSTYKNWIQSYRDLPILINQWANVVRWEMRTRL-F 163 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKM---FVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 +R+ EFL ++ ++ T + KM + +++ F + P+ L Sbjct: 164 LRTAEFLWQEGHTAHATKAEALEEAEKMMNVYATFVENFMAV------------PVIKGL 211 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E A ET FC + M Sbjct: 212 KTESERFAGADET--FCIEAMMQ------------------------------------- 232 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 + ++ G + G ++ + +GK YV S+G+ + R++ Sbjct: 233 -----------DGKALQAGTSHFLGQNFAKAFEVKYATKEGKQEYVWASSWGV-STRLMG 280 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDD 383 A+I + D G++ P +AP ++ ++ I K +Q+ R + + L K G V +DD Sbjct: 281 ALIMTHSDDNGLVLPPKLAPIQVVIVPIYKGEEQLEKVRTHIQPLVEELKKRGISVKFDD 340 Query: 384 MGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 Q G +F +L G P+++ VG + + ++ E+ R T +E ++ ++++ Sbjct: 341 RDTQSPGFKFHEYELKGVPVRLAVGQRDIENNTFEVARRDTLTKETVTGDQIV 393 >gi|50913800|ref|YP_059772.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] gi|68052904|sp|Q5XDC4|SYT_STRP6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|50902874|gb|AAT86589.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] Length = 647 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 169/415 (40%), Gaps = 46/415 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 252 MISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWDHY 311 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M + D D + + P + ++++H++SYR LP ++ + R E Sbjct: 312 QEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPIRIAELGMMHRYEKSGALS 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 372 GLQRVREMTLNDGHIF-VTPEQIQEEFQRALQLIIDVYADFNLTDYRFR---------LS 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + D +T + D M EN +L+ + E A Y D Sbjct: 422 YR-----DPNDTHKYYDNDEM-----WENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLD 471 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 472 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 520 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 521 TMERFTAILIETYKGAFPTW---LAPHQVTVIPISNEAHI--DYAWEVAKTLRDRGVRAD 575 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E++ + + P Q+IVG K + D V ++ + S+EE + Sbjct: 576 VDDRNEKMQYKIRTSQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEEFV 630 >gi|307702092|ref|ZP_07639099.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307707425|ref|ZP_07643907.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307616377|gb|EFN95568.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307616579|gb|EFN95769.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261] Length = 647 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|266620391|ref|ZP_06113326.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288868018|gb|EFD00317.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 633 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 104/437 (23%), Positives = 178/437 (40%), Gaps = 55/437 (12%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L T I G +LP G + + RE R G Sbjct: 230 YLTRIEEAKKRDHRKLGKELGLFT--IMDEGPGFPFFLPKGMVLKNALTNFWREIHEREG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E++ P + + LW SG +D Y KE + +D P + +++S +SY Sbjct: 288 YVEIATPIMLNRSLWETSGHWDHY-KENMYTTTIDDTEFAIKPMNCPGSMLVYKSQPRSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E G+MR R F DA+ + +TPE + + Sbjct: 347 RDLPLRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIY-MTPEQITDEIKGVVRLIDEV 405 Query: 185 FHRLGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G K + R E +G D + E ++ +D +D Sbjct: 406 YNMFGFKYHVELSTRPEDS-MGSD---------EDWEMATNSLREALD------EMGYDY 449 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--S 299 II+ E A Y D H E DSL R + G I + LP+ Sbjct: 450 IIN-----EGDGAFYGPKIDFHLE---DSL-------GRTWQCGTI---QLDFQLPLRFE 491 Query: 300 ATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + GADG+ H + + +G++ ++ + GK W +AP ++ ++ I + Sbjct: 492 AEYTGADGEKHRPIMIHRVLLGSIERFIGILIEHYAGKFPAW---LAPVQVKVLPISDKN 548 Query: 359 QVCRDACEKIYARLSK--VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +Y L K + C++ D+ E+IG + A L P ++ G+K + V Sbjct: 549 AAY---AKDVYNTLKKNHIRCEI--DERPEKIGYKIREAQLEKVPYMLVAGAKEEENHTV 603 Query: 417 EIKHRLTGIREDMSLEE 433 +++R +G MS+E+ Sbjct: 604 AVRYRDSGENVTMSVED 620 >gi|170759804|ref|YP_001788457.1| threonyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|238688792|sp|B1L0T7|SYT_CLOBM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169406793|gb|ACA55204.1| threonine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree] Length = 635 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 107/437 (24%), Positives = 173/437 (39%), Gaps = 52/437 (11%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH+ G + P G + + + REE + G Sbjct: 231 YLNMLEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIIRNILESFWREEHTKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y KE + + +D P + ++++ + SY Sbjct: 289 YQEIRTPLILNEALWHQSGHWDHY-KENMYFTNIDDGDYAIKPMNCPGGILVYKNSMHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ + R EL G+MR R F DA+ + +T E K + + + Sbjct: 348 RDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLY-MTKEQIKEEIVGI-IKLIDK 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F++L E+ V T S + + D I Sbjct: 406 FYKL-----------------FGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDSIGK 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSAT 301 + E A Y D H L D + R + G I F ++ L + Sbjct: 449 EYRVNEGDGAFYGPKIDFH---LKDCI-------GRTWQCGTIQLDFQMPERFDL----S 494 Query: 302 FKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + GADG+ H V YG R + +IE +P +AP ++ L+NI Sbjct: 495 YIGADGEKHRPVMVHRTIYG-SVERFIGILIEQYAGA----FPTWLAPVQVKLMNIT--- 546 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D +K+ L + V D E+IG + A L P +I+G K V KV + Sbjct: 547 DAQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQKIPYMLILGDKEVEAGKVAV 606 Query: 419 KHRLTGIREDMSLEEVI 435 + R G +SLEE I Sbjct: 607 RSRKDGDLGAISLEEFI 623 >gi|94989937|ref|YP_598037.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] gi|123258050|sp|Q1JI30|SYT_STRPD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|94543445|gb|ABF33493.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] Length = 647 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 169/415 (40%), Gaps = 46/415 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 252 MISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWDHY 311 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M + D D + + P + ++++H++SYR LP ++ + R E Sbjct: 312 QEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPIRIAELGMMHRYEKSGALS 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 372 GLQRVREMTLNDGHIF-VTPEQIQEEFQRALQLIIDVYADFNLTDYRFR---------LS 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + D +T + D M EN +L+ + E A Y D Sbjct: 422 YR-----DPNDTHKYYDNDEM-----WENAQSMLKAALDEMDVDYFEAEGEAAFYGPKLD 471 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 472 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 520 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 521 TMERFTAILIETYKGAFPTW---LAPHQVTVIPISNEAHI--DYAWEVAKTLRDRGVRAD 575 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E++ + + P Q+IVG K + D V ++ + S+EE + Sbjct: 576 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEEFV 630 >gi|187776940|ref|ZP_02993413.1| hypothetical protein CLOSPO_00484 [Clostridium sporogenes ATCC 15579] gi|187775599|gb|EDU39401.1| hypothetical protein CLOSPO_00484 [Clostridium sporogenes ATCC 15579] Length = 635 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 107/437 (24%), Positives = 173/437 (39%), Gaps = 52/437 (11%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH+ G + P G + + + REE + G Sbjct: 231 YLNMLEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIVRNILESFWREEHTKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y KE + + +D P + ++++ + SY Sbjct: 289 YQEIRTPLILNEALWHQSGHWDHY-KENMYFTNIDDGDYAIKPMNCPGGILVYKNSMHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ + R EL G+MR R F DA+ + +T E K + + + Sbjct: 348 RDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLY-MTKEQIKEEVVGI-IKLIDK 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F++L E+ V T S + + D I Sbjct: 406 FYKL-----------------FGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDSIGK 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSAT 301 + E A Y D H L D + R + G I F ++ L + Sbjct: 449 EYRVNEGDGAFYGPKIDFH---LKDCI-------GRTWQCGTIQLDFQMPERFDL----S 494 Query: 302 FKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + GADG+ H V YG R + +IE +P +AP ++ L+NI Sbjct: 495 YIGADGEKHRPVMVHRTIYG-SVERFIGILIEQYAGA----FPTWLAPVQVKLMNITDSQ 549 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D +K+ L + V D E+IG + A L P +I+G K V KV + Sbjct: 550 Y---DYLKKVEETLKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAV 606 Query: 419 KHRLTGIREDMSLEEVI 435 + R G +SLEE I Sbjct: 607 RSRKDGDLGAISLEEFI 623 >gi|172058202|ref|YP_001814662.1| threonyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] gi|171990723|gb|ACB61645.1| threonyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] Length = 646 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 88/412 (21%), Positives = 178/412 (43%), Gaps = 37/412 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G V I +++ G + P L S +L+ SG +D Y +M Sbjct: 265 QGLPMWLPKGAAIRRTVERYIVDKELELGYEHVYTPVLGSVELYKTSGHWDHYQDDMFPK 324 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I+++ +SYR+LP ++ R E+ G+ R R Sbjct: 325 MEMDNEELVLRPMNCPHHMMIYKNEPRSYRDLPLRVAELGGMHRYEMSGALTGLQRVRYM 384 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 ++ D ++F + P+ K + + ++ G+ R + P + + + Sbjct: 385 VLNDGHTF-VRPDQMKEEFKAIVHLIQEVYADFGITDYKFRLSYRDPADKEKYFDNDAIW 443 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + + ++ + D ++ P F+ E A Y DV ++ +L ++ Sbjct: 444 EMAQRELKETMDELELPY------FE--------AEGEAAFYGPKLDV---QVRTALGKD 486 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+KG DG+DH + G+ + R VA +IE Sbjct: 487 ETLSTVQLD----FLLPERFEL----TYKGNDGQDHRPVVLHRGVVSTMERFVAYLIEEY 538 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ LI + + V D +I L K G V D E++G + Sbjct: 539 ---KG-AFPTWLAPVQVKLIPVSS---VHEDYAREIKTMLLKKGIRVETDFRDEKLGYRI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 A + P+ +++G K + +V I+ + + SLE+ ++ +N Sbjct: 592 REAQVNKVPVMLVLGDKEIEAREVNIRRYGSKDSSNASLEQFVSDLEQEIAN 643 >gi|296113663|ref|YP_003627601.1| threonyl-tRNA synthetase [Moraxella catarrhalis RH4] gi|295921357|gb|ADG61708.1| threonyl-tRNA synthetase [Moraxella catarrhalis RH4] Length = 639 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 93/415 (22%), Positives = 169/415 (40%), Gaps = 56/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +D+YG+ Sbjct: 255 MQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYGE 314 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M A ++ D A+ P + +F +KSYR+LP + R+E G+ Sbjct: 315 MMFTTASEKRDYAI--KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDL 206 MR R F DA+ F + + + N + ++ L ++ G I M+ + P +G D Sbjct: 373 MRVRGFTQDDAHIFCTNAQIRQEALNFIKLT-LDVYKDFGFDHIQMKLSTRPEKRVGAD- 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 L D E + D +D N D W A + K Sbjct: 431 -----ELWDLAEQAL---ADALD------NAGLD-----------WELQ-AGEGAFYGPK 464 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + SL + +G ++ GT ++LP + A F G G ++ V + +G Sbjct: 465 IEFSLQDC---------IGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILG 515 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + ++ + G ++P +AP ++ ++NI D+ + ++L+ G Sbjct: 516 SFERFIGILIEHYAG---LFPAWLAPQQVVVMNITDKQA---DSVGDVVSKLNAKGYRAI 569 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + L P +I+G K V V ++ R M+L++ I Sbjct: 570 SDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNVRTRTGENLGSMNLDDFI 624 >gi|256820371|ref|YP_003141650.1| prolyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] gi|256581954|gb|ACU93089.1| prolyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] Length = 492 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 74/359 (20%), Positives = 152/359 (42%), Gaps = 65/359 (18%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GK M+ + ++ +I PT E ++ + +++ I+SYR+LP Q R E+R R Sbjct: 105 GKLMVDPEAKLEEELIVRPTSEAIIWNTYKNWIQSYRDLPILINQWANVVRWEMRTRL-F 163 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T + KM Y + Sbjct: 164 LRTAEFLWQEGHTAHATKAEAIEEAQKMMNVYA--------------------------D 197 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 F+ ++FM P+ I + S E+ +A D + + Sbjct: 198 FV-------------ENFMAVPV---------IKGVKSESER----FAGADDTY---CIE 228 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 +L ++ + ++ G + G ++ + +GK YV S+G+ + R++ A+I Sbjct: 229 ALMQD----GKALQAGTSHFLGQNFAKAFDVKYVSKEGKQEYVWASSWGV-STRLMGALI 283 Query: 330 ESSHDGKGIIWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDMGE 386 + D G++ P +AP ++ ++ I K +Q+ R + + L K V +DD Sbjct: 284 MTHSDDNGLVLPPKLAPIQVVIVPIYKGAEQLEKVRSHIQPLIEELKKHNISVKFDDRDT 343 Query: 387 QI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 Q G +F +L G P+++ VG + + + E+ R T +E ++ ++++ + N Sbjct: 344 QSPGFKFHEYELKGIPVRLAVGQRDIEHNTFEVARRDTLTKETVAGDQIVAHIQQLLEN 402 >gi|71903081|ref|YP_279884.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] gi|123734122|sp|Q48US7|SYT_STRPM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71802176|gb|AAX71529.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] Length = 647 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 170/415 (40%), Gaps = 46/415 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 252 MISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWDHY 311 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M + D D + + P + ++++H++SYR LP ++ + R E Sbjct: 312 QEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPIRIAELGMMHRYEKSGALS 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 372 GLQRVREMTLNDGHIF-VTPEQIQEEFQRALQLIIDVYADFNLTDYRFR---------LS 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + D +T+ + D M EN +L+ + E A Y D Sbjct: 422 YR-----DPNDTRKYYDNDEM-----WENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLD 471 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 472 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 520 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 521 TMERFTAILIETYKGAFPTW---LAPHQVTVIPISNEAHI--DYAWEVAKTLRDRGVRAD 575 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E++ + + P Q+IVG K + D V ++ + S+EE + Sbjct: 576 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEEFV 630 >gi|326563502|gb|EGE13765.1| threonyl-tRNA synthetase [Moraxella catarrhalis 103P14B1] gi|326573810|gb|EGE23767.1| threonyl-tRNA synthetase [Moraxella catarrhalis 101P30B1] Length = 639 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 93/415 (22%), Positives = 169/415 (40%), Gaps = 56/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +D+YG+ Sbjct: 255 MQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYGE 314 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M A ++ D A+ P + +F +KSYR+LP + R+E G+ Sbjct: 315 MMFTTASEKRDYAI--KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDL 206 MR R F DA+ F + + + N + ++ L ++ G I M+ + P +G D Sbjct: 373 MRVRGFTQDDAHIFCTNAQIRQEALNFIKLT-LDVYKDFGFDHIQMKLSTRPEKRVGAD- 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 L D E + D +D N D W A + K Sbjct: 431 -----ELWDLAEQAL---ADALD------NAGLD-----------WELQ-AGEGAFYGPK 464 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + SL + +G ++ GT ++LP + A F G G ++ V + +G Sbjct: 465 IEFSLQDC---------IGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILG 515 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + ++ + G ++P +AP ++ ++NI D+ + ++L+ G Sbjct: 516 SFERFIGILIEHYAG---LFPAWLAPQQVVVMNITDKQA---DSVGDVVSKLNAKGYRAI 569 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + L P +I+G K V V ++ R M+L++ I Sbjct: 570 SDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNVRTRTGENLGSMNLDDFI 624 >gi|240013609|ref|ZP_04720522.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI18] gi|240112403|ref|ZP_04726893.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|240120679|ref|ZP_04733641.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1] Length = 648 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 83/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 266 LQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 441 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 442 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 501 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R V Sbjct: 502 RLDAEYVTENNDRARPVML-------------------------HRAILGSLE----RFV 532 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 533 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 585 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 586 EKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 621 >gi|19745635|ref|NP_606771.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS8232] gi|94988057|ref|YP_596158.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94991943|ref|YP_600042.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] gi|139474254|ref|YP_001128970.1| threonyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] gi|306827837|ref|ZP_07461106.1| threonine--tRNA ligase [Streptococcus pyogenes ATCC 10782] gi|25453286|sp|Q8P234|SYT_STRP8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123080426|sp|Q1JMY5|SYT_STRPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123382336|sp|Q1JD10|SYT_STRPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225506|sp|A2RFY5|SYT_STRPG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|19747765|gb|AAL97270.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes MGAS8232] gi|94541565|gb|ABF31614.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94545451|gb|ABF35498.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] gi|134272501|emb|CAM30764.1| threonyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] gi|304429946|gb|EFM32986.1| threonine--tRNA ligase [Streptococcus pyogenes ATCC 10782] Length = 647 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 169/415 (40%), Gaps = 46/415 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 252 MISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWDHY 311 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M + D D + + P + ++++H++SYR LP ++ + R E Sbjct: 312 QEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPIRIAELGMMHRYEKSGALS 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 372 GLQRVREMTLNDGHIF-VTPEQIQEEFQRALQLIIDVYADFNLTDYRFR---------LS 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + D +T + D M EN +L+ + E A Y D Sbjct: 422 YR-----DPNDTHKYYDNDEM-----WENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLD 471 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 472 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 520 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 521 TMERFTAILIETYKGAFPTW---LAPHQVTVIPISNEAHI--DYAWEVAKTLRDRGVRAD 575 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E++ + + P Q+IVG K + D V ++ + S+EE + Sbjct: 576 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEEFV 630 >gi|307705352|ref|ZP_07642214.1| threonyl-tRNA synthetase [Streptococcus mitis SK597] gi|307621139|gb|EFO00214.1| threonyl-tRNA synthetase [Streptococcus mitis SK597] Length = 647 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYGDFNLNEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|157150881|ref|YP_001450077.1| threonyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] gi|189083628|sp|A8AWB7|SYT_STRGC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157075675|gb|ABV10358.1| threonyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] Length = 647 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 REDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|268681605|ref|ZP_06148467.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|268621889|gb|EEZ54289.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332] Length = 637 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/398 (21%), Positives = 153/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 430 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 + A+ G E C ++ + +P E + I +++ W V Sbjct: 431 DVWDKAEQGLREALTACGVEWGE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 488 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 489 PERLDAEYVTENNDRARPVML-------------------------HRAILGSL----ER 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 V +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 520 FVGILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDL 572 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 573 RNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 610 >gi|254493203|ref|ZP_05106374.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268598466|ref|ZP_06132633.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|226512243|gb|EEH61588.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268582597|gb|EEZ47273.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11] Length = 637 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/398 (21%), Positives = 153/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 430 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 + A+ G E C ++ + +P E + I +++ W V Sbjct: 431 DVWDKAEQGLREALTACGVEWGE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 488 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 489 PERLDAEYVTENNDRARPVML-------------------------HRAILGSL----ER 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 V +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 520 FVGILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDL 572 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 573 RNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 610 >gi|262282640|ref|ZP_06060408.1| threonyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] gi|262261931|gb|EEY80629.1| threonyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] Length = 647 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 REDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|313158764|gb|EFR58151.1| proline--tRNA ligase [Alistipes sp. HGB5] Length = 494 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/346 (20%), Positives = 147/346 (42%), Gaps = 79/346 (22%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEELIVRPTSETIIWNTYKNWIQSYRDLPILCNQWANVVRWEMRTRL-FLRTAEFLWQEG 176 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E + KM + ++ R Sbjct: 177 HTAHATREEAVEEAEKM----IHVYQRF-------------------------------- 200 Query: 221 VFCSKDFMDFPI----PSENTDF---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 ++++M P+ S N F +D +++ ++++ Sbjct: 201 ---AEEWMSLPVVVGHKSPNERFAGAEDTLTIEALMQ----------------------- 234 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 + ++ G + G ++ + +GK YV S+G+ + R++ A+I + Sbjct: 235 ----DGKALQSGTSHFLGQNFAKAFDVQYVNKEGKLEYVWATSWGV-STRLMGALIMAHS 289 Query: 334 DGKGIIWPDSVAPFKISLINI-KAHDQVC--RDACEKIYARLSKVGCDVFWDDMGE-QIG 389 D G++ P +AP ++ +I I K DQ+ R E I A+L G V DD + G Sbjct: 290 DNNGLVLPPKLAPIQVVMIPIYKGDDQLAEIRTRFEAIAAQLKAKGISVKIDDRDNVRSG 349 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +FA +L G P+++ +G + + + +E+ R T ++ +S E ++ Sbjct: 350 FKFAEYELKGVPVRLAMGPRDMENGTIELVRRDTLEKQTVSQEGLV 395 >gi|319946565|ref|ZP_08020800.1| threonine--tRNA ligase [Streptococcus australis ATCC 700641] gi|319747311|gb|EFV99569.1| threonine--tRNA ligase [Streptococcus australis ATCC 700641] Length = 647 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYGDFNLNEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|240122983|ref|ZP_04735939.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332] Length = 648 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/398 (21%), Positives = 153/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 266 LQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 441 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 + A+ G E C ++ + +P E + I +++ W V Sbjct: 442 DVWDKAEQGLREALTACGVEWGE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 499 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 500 PERLDAEYVTENNDRARPVML-------------------------HRAILGSL----ER 530 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 V +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 531 FVGILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDL 583 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 584 RNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 621 >gi|194098020|ref|YP_002001068.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|193933310|gb|ACF29134.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] Length = 648 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 83/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 266 LQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 441 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 442 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 501 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R V Sbjct: 502 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFV 532 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 533 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 585 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 586 EKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 621 >gi|327470637|gb|EGF16093.1| threonine--tRNA ligase [Streptococcus sanguinis SK330] Length = 645 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 88/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V DS V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDSTVNVR 616 >gi|187921760|ref|YP_001890792.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN] gi|187720198|gb|ACD21421.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 404 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 90/400 (22%), Positives = 158/400 (39%), Gaps = 48/400 (12%) Query: 31 MIHQHSKGI--YSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDS 88 + HQ +G+ W P G + + +R R G E+ P L + LW +SG ++ Sbjct: 15 LFHQQEEGVGMVFWHPRGWELYRVLEVYVRARMRRAGFREIRTPQLLARSLWEKSGHWEK 74 Query: 89 YGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 +G M LAD + +A+ P +F ++SYR LP + + RDE Sbjct: 75 FGAAMYSLADAEEGRALCLKPMSCPCHVQVFNQRVRSYRELPVRYSEFGACHRDEPSGSL 134 Query: 148 -GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGGD 205 G+ R+R F+ DA+ F E F + LR ++ LG + + P Sbjct: 135 EGLKRTRAFVQDDAHVF--CTEAQIEVEVGRFCALLRTVYADLGFPRFKVALATRPA--- 189 Query: 206 LSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 G+ Q + ++D + + +F+ ++E A Y + H Sbjct: 190 --------MRAGDDQTWDRAEDALANAARAAGLEFE-------VLEGEGAFYGPKLEFH- 233 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGA-DGKDHYVQMGSYGIGA 321 L DS AR + G I + LP + A F + ++ V + +G+ Sbjct: 234 --LLDS-------RARSWQCGTI---QLDFVLPERLDAEFVNERNERERPVMIHHAVLGS 281 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 M A++ H+G +W +AP ++ + I + R +++ L G Sbjct: 282 MERFIAMLLEHHEGWLPVW---LAPEQVVVATIS---ETNRAYAQEVMQALDDAGVRAVL 335 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E++ + A PL V+VGS+ D + I+ R Sbjct: 336 DSRPERLEKKIVDAREKQVPLLVVVGSRDERDQTISIRLR 375 >gi|317129892|ref|YP_004096174.1| threonyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315474840|gb|ADU31443.1| threonyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 645 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 93/452 (20%), Positives = 187/452 (41%), Gaps = 53/452 (11%) Query: 15 PRDAEIASHKLMLRTGMIHQHSK-----GIYS-----------WLPLGQKALDNVNAIIR 58 P+ ++ H ML H K GI++ WLP G + I Sbjct: 226 PKQQQLEDHLKMLEEAKERDHRKLGKELGIFTINQKVGQGLPLWLPKGATIRRTIERYIV 285 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 + + R G + P L S +L+ SG +D Y ++M + +++ ++ P + I+ Sbjct: 286 DLEERLGYDHVYTPVLGSVELYKTSGHWDHYHEDMFPTMEMDNEDLVLRPMNCPHHMMIY 345 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++ + SYRNLP ++ R E+ G+ R R + DA+ F P+ K + ++ Sbjct: 346 KNQLHSYRNLPVRIAELGTMHRHEMSGALAGLQRVRAMTLNDAHIF-CRPDQLKDEFIRV 404 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ G+ R LS+ D + + + D M + Sbjct: 405 VELVQNVYQDFGIDDYYFR---------LSYR-----DPEDKEKYVDNDEMWEKAQAMLK 450 Query: 238 DFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + + ++++ + E A Y DV ++ +L +++ +S ++ F+ ++ L Sbjct: 451 EAMEDMNVDYVEAEGEAAFYGPKLDV---QVKTALGKDETLSTVQLD----FHLPNRFEL 503 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + G DGK+H + G+ + R VA +IE KG +P +AP ++ +I + Sbjct: 504 ----AYVGEDGKEHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVEVIPV 555 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 +V D ++ +L + G V D E++G + A + P +++G K + S Sbjct: 556 S---EVHMDYVRRVEDKLKQAGVRVHVDVRDEKLGYKIREAQMQKIPYILVLGDKEIEAS 612 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V ++ E + L+E ++ N + Sbjct: 613 TVNVRKYGQKDSEAVGLDEFVSSMKEEIQNRK 644 >gi|255535772|ref|YP_003096143.1| prolyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] gi|255341968|gb|ACU08081.1| Prolyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] Length = 491 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 77/348 (22%), Positives = 147/348 (42%), Gaps = 79/348 (22%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ ++SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 115 EEELIVRPTSEAIIWNTYKNWVQSYRDLPILINQWANVVRWEMRTRL-FLRTAEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T + + KM D+ +F Sbjct: 174 HTAHATRDEALEETEKML--------------------------DVYADF---------- 197 Query: 221 VFCSKDFMDFP----IPSENTDF---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 +++FM P I +E+ F D+ + ++++ A A TS Sbjct: 198 ---TENFMAIPVIRGIKTESERFAGADETYCIEALMQDGKALQAGTS------------- 241 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 + G + F +GK + S+G + R+V A+I + Sbjct: 242 --------------HFLGQNFGKAFDVKFTNREGKIEHAWGTSWGT-STRLVGALIMTHS 286 Query: 334 DGKGIIWPDSVAPFKISLINI-KAHDQVCR-DACE-KIYARLSKVGCDVFWDDMGE-QIG 389 D G++ P S+AP ++ ++ I K +Q+ + DA + A+L G V +D+ E + G Sbjct: 287 DDLGLVLPPSLAPIQVVIVPIFKGEEQLSQIDAVAYDLQAKLKAKGISVKYDNRTENKPG 346 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +FA +L G P+++ +G++ + + VEI R +E LE + NY Sbjct: 347 WKFAEYELKGVPIRIAMGARDLENKTVEIARRDNLTKETQPLEGIENY 394 >gi|329118120|ref|ZP_08246832.1| threonine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] gi|327465780|gb|EGF12053.1| threonine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] Length = 640 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 83/397 (20%), Positives = 153/397 (38%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+E + G E+ P + W SG +D+Y Sbjct: 261 LQEEAPGMVFWHPRGWALWQAIEQHMRKELDAAGYREVKTPQIMDKTFWERSGHWDNYKD 320 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 321 NMF-VTQSEKREYAVKPMNCPGHVQIFNNSLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 379 Query: 151 RSREFLMKDAYSF---DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 R R F+ DA+ F D E ++ +N++ V RI+ + G + ++ P S Sbjct: 380 RVRGFVQDDAHIFCTEDQIVEEARR-FNELLV---RIYKQFGFHDVAVKLSLRPEKRAGS 435 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHN 264 + A+ G + +P E + I ++I W V Sbjct: 436 DDIWDKAEQGLRDALTACGVEWEELPGEGAFYGPKIEYHVKDAIGRSWQCGTLQLDFV-- 493 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 LPE R+ A + ++G+ V + +G++ Sbjct: 494 ------LPE--RLDAEYV--------------------TESNGRARPVMLHRAILGSLER 525 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ +H G +W +AP ++ ++NI H D C K+ +L G V D Sbjct: 526 FIGILIENHAGSFPLW---LAPVQMVVMNITEHQA---DYCRKVVEKLRAEGFRVELDLR 579 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K + +V ++ + Sbjct: 580 NEKIGYKIRDNSQYRFPYQIVVGDKEKENGQVAVRRK 616 >gi|326562776|gb|EGE13071.1| threonyl-tRNA synthetase [Moraxella catarrhalis 46P47B1] gi|326563180|gb|EGE13448.1| threonyl-tRNA synthetase [Moraxella catarrhalis 12P80B1] Length = 639 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 93/415 (22%), Positives = 168/415 (40%), Gaps = 56/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +D+YG+ Sbjct: 255 MQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYGE 314 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M A ++ D A+ P + +F +KSYR+LP + R+E G+ Sbjct: 315 MMFTTASEKRDYAI--KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDL 206 MR R F DA+ F + + N + ++ L ++ G I M+ + P +G D Sbjct: 373 MRVRGFTQDDAHIFCTNAQIRSEALNFIKLT-LDVYKDFGFDHIQMKLSTRPEKRVGAD- 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 L D E + D +D N D W A + K Sbjct: 431 -----ELWDLAEQAL---ADALD------NAGLD-----------WELQ-AGEGAFYGPK 464 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + SL + +G ++ GT ++LP + A F G G ++ V + +G Sbjct: 465 IEFSLQDC---------IGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILG 515 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + ++ + G ++P +AP ++ ++NI D+ + ++L+ G Sbjct: 516 SFERFIGILIEHYAG---LFPAWLAPQQVVVMNITDKQA---DSVGDVVSKLNAKGYRAI 569 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + L P +I+G K V V ++ R M+L++ I Sbjct: 570 SDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNVRTRTGDNLGSMNLDDFI 624 >gi|330508032|ref|YP_004384460.1| prolyl-tRNA synthetase [Methanosaeta concilii GP-6] gi|328928840|gb|AEB68642.1| prolyl-tRNA synthetase [Methanosaeta concilii GP-6] Length = 487 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 101/460 (21%), Positives = 169/460 (36%), Gaps = 112/460 (24%) Query: 23 HKLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIRE---------------EQNRTG 65 H+L++ +I KG+ W P G NV IIR+ +N Sbjct: 32 HELLMTGEIIDNRYPVKGMCVWFPFGFAIKKNVYGIIRQLLDPDHQETLFPLMIPENEFM 91 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + + WV G ++LA R PT E + +F+ I+S+ Sbjct: 92 KEAQHIKGFEEEVYWVTCGGTTPLE---VKLALR--------PTSETAIYPMFKLWIRSH 140 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++P YQI FR E + ++R RE K+A++ T E + Y Sbjct: 141 ADMPLRIYQIVNTFRYETKHTRPLIRLREITSFKEAHTVHATWEEAAEQVEVAIKRYSEF 200 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + RL +IP P + FP T D I Sbjct: 201 YRRL---AIPFLVSRRP------------------------SWDKFPGADYTTAIDVI-- 231 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 +P+ K ++VG + G+ ++ T++ Sbjct: 232 --------------------------MPDGK-----TLQVGTAHHLGSTFAKTYEITYEA 260 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-----Q 359 DG+ V YGI + R +AA+I D KG+ P VAP ++ ++ I D + Sbjct: 261 EDGEQKLVNQTCYGI-SERCIAALISVHGDDKGLALPWEVAPVQVVIVPILLGDKEKVLE 319 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 VCRD + L + G V D E+ G++F ++ G P+++ VG + + V + Sbjct: 320 VCRD----LLRILQQAGIRVELDTSDERPGAKFYKWEMKGVPIRLEVGPRDIEKGVVTVV 375 Query: 420 HR----LTGIREDMS---------LEEVINYASHRFSNNR 446 R LT RE ++ L+ + + F+N+R Sbjct: 376 RRDAEKLTLPREGLAQALVREAERLQAALYQRAEAFANSR 415 >gi|94993836|ref|YP_601934.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] gi|123080137|sp|Q1J7X1|SYT_STRPF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|94547344|gb|ABF37390.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] Length = 647 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 169/415 (40%), Gaps = 46/415 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 252 MISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWDHY 311 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M + D D + + P + ++++H++SYR LP ++ + R E Sbjct: 312 QEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPIRIAELGMMHRYEKSGALS 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 372 GLQRVREMTLNDGHIF-VTPEQIQEEFRRALQLIIDVYADFNLTDYRFR---------LS 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + D +T + D M EN +L+ + E A Y D Sbjct: 422 YR-----DPNDTHKYYDNDEM-----WENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLD 471 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 472 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 520 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 521 TMERFTAILIETYKGAFPTW---LAPHQVTVIPISNEAHI--DYAWEVAKTLRDRGVRAD 575 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E++ + + P Q+IVG K + D V ++ + S+EE + Sbjct: 576 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEEFV 630 >gi|119476522|ref|ZP_01616873.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] gi|119450386|gb|EAW31621.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] Length = 645 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 95/418 (22%), Positives = 158/418 (37%), Gaps = 68/418 (16%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + + +RE+Q E+ P L LW +SG D +G Sbjct: 255 MQEEAPGMVFWHPKGWSIYTTIESYMREQQTLNNYQEIKTPQLVDFSLWQKSGHADKFGD 314 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +M L AD D A+ P + IF +KSYR+LP + R+E G+ Sbjct: 315 DMFTLEADGRDFAI--KPMNCPCHVQIFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGGDLSH 208 MR R F+ DA+ F E +F+ +L ++ G + R + P Sbjct: 373 MRVRGFVQDDAHIF--ATENQIQPEVSVFIDFLHSVYEDFGFSDVIYRLSTRP------- 423 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK-- 266 E +V TD E W A +D N K Sbjct: 424 ---------EQRV--------------GTD-----------ESWDKAEKALADALNSKGL 449 Query: 267 LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQM 314 ++ LP IE +G ++ GT +S+P + A + DG + V + Sbjct: 450 PWEELPGEGAFYGPKIEFSLKDCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGSRQTPVML 509 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 +G+ ++ ++G W +AP ++ + NI +K++ L Sbjct: 510 HRAILGSFERFIGILIEHYEGAFPTW---LAPTQVVIANITDKQA---PYVKKVHQSLKN 563 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G V D E+IG + + P ++VG K + + V ++ R MSLE Sbjct: 564 SGIRVDADLRNEKIGFKIREHIIQKVPYLLVVGDKEIENQTVAVRARNGEDLGSMSLE 621 >gi|88602429|ref|YP_502607.1| prolyl-tRNA synthetase [Methanospirillum hungatei JF-1] gi|114152211|sp|Q2FLY5|SYP_METHJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|88187891|gb|ABD40888.1| prolyl-tRNA synthetase [Methanospirillum hungatei JF-1] Length = 478 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 85/420 (20%), Positives = 164/420 (39%), Gaps = 69/420 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+Y W P G V I+RE +R + + + E+ + E+ + Sbjct: 35 KGLYVWFPFGFGIRKRVYGILRELLDRDHEETLFPLLIPEPEFMKEAEHIKGFENEVYWV 94 Query: 97 ADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 D + PT E + ++ ++S+ +LP YQI FR E + ++R Sbjct: 95 THGGTTPLDIKLALRPTSETAIYPMYALWVRSHADLPIKVYQIVNTFRYETKHTRPLIRL 154 Query: 153 REFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE K+A++ T E ++ Y + RL +IP+ P Sbjct: 155 REITSFKEAHTVHATWEDAERQVEDAIARYREFYDRL---NIPVLISKRP---------- 201 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D+ FP D I++++I + Sbjct: 202 --------------DWDKFP------GADYTIAVDTI----------------------M 219 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P+ R +++G + + G +S S ++ G+ Y YGI R +AA+I Sbjct: 220 PD-----GRTLQIGTVHHLGDHFSKTFSIQYEDTKGQQQYCHQTCYGISE-RSIAALISM 273 Query: 332 SHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 D +G++ P VAP +I ++ + K ++ A E + L G V D + G Sbjct: 274 HGDDRGLMLPPEVAPVQIVIVPVIMKKREEEIMQAAELLEKELQNAGYRVKIDTRDLRPG 333 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 +++ ++ G PL++ +G + + D+ V + +G +E + ++I + + + +L Sbjct: 334 AKYYYWEMRGVPLRLEIGPRDL-DNGVVMGVLRSGGKESLPRADIIAEVNRKMTEFTAIL 392 >gi|59800743|ref|YP_207455.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] gi|73919809|sp|Q5F9U4|SYT_NEIG1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|59717638|gb|AAW89043.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] Length = 637 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 84/398 (21%), Positives = 153/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 430 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 + A+ G E C ++ + +P E + I +++ W V Sbjct: 431 DVWDKAEQGLREALTACGVEWGE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 488 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 489 PERLDAEYVTENNDRARPVML-------------------------HRAILGSL----ER 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 520 FIGILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDL 572 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 573 RNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 610 >gi|322385772|ref|ZP_08059416.1| threonine--tRNA ligase [Streptococcus cristatus ATCC 51100] gi|321270510|gb|EFX53426.1| threonine--tRNA ligase [Streptococcus cristatus ATCC 51100] Length = 649 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 90/415 (21%), Positives = 168/415 (40%), Gaps = 46/415 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ E++ + + P Q+IVG K + D V ++ + +S++E + Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDEFV 632 >gi|77408338|ref|ZP_00785079.1| threonyl-tRNA synthetase [Streptococcus agalactiae COH1] gi|77173019|gb|EAO76147.1| threonyl-tRNA synthetase [Streptococcus agalactiae COH1] Length = 647 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 91/404 (22%), Positives = 166/404 (41%), Gaps = 37/404 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ +G + P + S + + SG +D Y ++M Sbjct: 259 QGLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPMASVEFYKTSGHWDHYREDMFPT 318 Query: 97 ADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D D + + P + ++++ H+ SYR LP ++ + R E G+ R RE Sbjct: 319 MDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAELGMMHRYEKSGALTGLQRVRE 378 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVL 213 + DA+ F +TPE K + K I+ L R + P + H++ Sbjct: 379 MTLNDAHIF-VTPEQIKDEFLKALNLIAEIYEDFNLTDYRFRLSYRDP---EDKHKYYDN 434 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLP 272 + E K+ MD DF L+ E A Y D+ ++ +L Sbjct: 435 DEMWENAQAMLKEAMD--------DF----GLDYFEAEGEAAFYGPKLDI---QVKTALG 479 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIES 331 + +S ++ F ++ L + GADG++H + + GI M A++ Sbjct: 480 NEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPIMIHRGGISTMERFTAILIE 531 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++ G W +AP ++S+I I + D ++ L G DD E++ + Sbjct: 532 TYKGAFPTW---LAPQQVSVIPISNEAHI--DYAWEVARALKDRGIRAEVDDRNEKMQYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A P Q+IVG K + + V ++ + E S+EE + Sbjct: 587 IRAAQTQKIPYQLIVGDKEMEEKAVNVRRYGSKATETKSIEEFV 630 >gi|268683833|ref|ZP_06150695.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|268624117|gb|EEZ56517.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] Length = 637 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 85/398 (21%), Positives = 153/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 430 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 + A+ G E C ++ + +P E + I +++ W V Sbjct: 431 DVWDKAEQGLREALTACGVEWGE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 488 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 489 PERLDAEYVTENNDRARPVML-------------------------HRAILGSL----ER 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 V +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 520 FVGILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDL 572 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 573 RNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 610 >gi|239998484|ref|ZP_04718408.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|240125235|ref|ZP_04738121.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|317163762|gb|ADV07303.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107] Length = 648 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 85/398 (21%), Positives = 153/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 266 LQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 441 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 + A+ G E C ++ + +P E + I +++ W V Sbjct: 442 DVWDKAEQGLREALTACGVEWGE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 499 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 500 PERLDAEYVTENNDRARPVML-------------------------HRAILGSLE----R 530 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 V +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 531 FVGILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDL 583 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 584 RNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 621 >gi|167746735|ref|ZP_02418862.1| hypothetical protein ANACAC_01447 [Anaerostipes caccae DSM 14662] gi|167653695|gb|EDR97824.1| hypothetical protein ANACAC_01447 [Anaerostipes caccae DSM 14662] Length = 644 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 100/415 (24%), Positives = 167/415 (40%), Gaps = 55/415 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ G +LP G + + RE N+ G +E+S P + S LW SG +D Y Sbjct: 253 MMRDEGPGFPFFLPNGMVLKNTLLDYWREIHNKAGYVEISSPIMLSRHLWETSGHWDHYQ 312 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M + D D A+ P + +++S +SYR+LP ++ L R E + G Sbjct: 313 ENMYTTVIDEEDFAI--KPMNCPGGVLVYQSEPRSYRDLPLRMGELGLVHRHEKSGQLHG 370 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 +MR R F DA+ F + PE K + +++ G K Sbjct: 371 LMRVRCFTQDDAHIF-MMPEQIKDEIKGVAALIDQVYSLFGFKY---------------- 413 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT-APYAATSDVHNEKL 267 + L+ E + +D+ + S + DD + L+ +V + A Y D H E Sbjct: 414 -HVELSTRPEDSMGSDEDW-EMATDSLRSALDD-LGLDYVVNEGDGAFYGPKIDFHLE-- 468 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLPM--SATFKGADGKDHY-VQMGSYGIGA 321 DS +G + GT + LP+ + GADG+ H + + G+ Sbjct: 469 -DS-------------IGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRVAFGS 514 Query: 322 M-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + R + +IE +P +AP ++ +I I D K+ L G Sbjct: 515 IERFIGILIEHFAGA----FPTWLAPVQVKVIPISDKH---LDYGTKVLDALKAAGIRAE 567 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E++G + A L P ++VG K + V ++ R G MSL++ I Sbjct: 568 IDTRAEKMGYKIREAQLHKIPYMLVVGGKEEENQAVSVRSRFKGDEGQMSLDDFI 622 >gi|268596339|ref|ZP_06130506.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268550127|gb|EEZ45146.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19] Length = 638 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 256 LQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 316 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 375 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 431 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 432 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYRVKDALGRSWQCGTLQLDFVLPE 491 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 492 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 522 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 523 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 575 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 576 EKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 611 >gi|268594343|ref|ZP_06128510.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|268547732|gb|EEZ43150.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] Length = 638 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 85/398 (21%), Positives = 153/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 256 LQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 316 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 375 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 431 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 + A+ G E C ++ + +P E + I +++ W V Sbjct: 432 DVWDKAEQGLREALTACGVEWGE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 489 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 490 PERLDAEYVTENNDRARPVML-------------------------HRAILGSL----ER 520 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 V +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 521 FVGILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 574 RNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 611 >gi|269213639|ref|ZP_05982445.2| threonine--tRNA ligase [Neisseria cinerea ATCC 14685] gi|269145722|gb|EEZ72140.1| threonine--tRNA ligase [Neisseria cinerea ATCC 14685] Length = 643 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 84/396 (21%), Positives = 151/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +++Y Sbjct: 261 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKD 320 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 321 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 379 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 380 RVRGFVQDDAHIFCTEDQIVDEARAFNELLV---RIYKQFGFHDVAVKLSLRPEQRAGSD 436 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 E A+ G + +P E + I +++ W V E Sbjct: 437 EVWDKAEQGLRDALTACGVEWEELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 496 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L K AR + + H +GS R + Sbjct: 497 RLNAEYVTEKNDRARPVML-------------------------HRAILGSL----ERFI 527 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G V D Sbjct: 528 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRVELDLRN 580 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 581 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 616 >gi|317499591|ref|ZP_07957854.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893140|gb|EFV15359.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 641 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 100/429 (23%), Positives = 167/429 (38%), Gaps = 55/429 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ + G +LP G + + RE + G +E+S P + S LW SG +D Y Sbjct: 253 MMREEGPGFPFFLPKGMVLKNTLLDYWREIHQKAGYVEISTPIMLSRHLWETSGHWDHY- 311 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +D+ P + ++ S +SYR+LP ++ L R E + G+ Sbjct: 312 KENMYTTVIDDQDFAIKPMNCPGGVLVYDSEPRSYRDLPLRMGELGLVHRHEKSGQLHGL 371 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F DA+ F +TP+ K + ++++ G K Sbjct: 372 MRVRCFTQDDAHIF-MTPDQIKDEIKGVAGLIDQVYNLFGFK------------------ 412 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT-APYAATSDVHNEKLF 268 + V T S + + S DD + L+ +V + A Y D H E Sbjct: 413 YHVELSTRPDDSMGSDEDWELATDSLRAALDD-LGLDYVVNEGDGAFYGPKIDFHLE--- 468 Query: 269 DSLPENKRVSARGIEVGHIFYFGT---KYSLPM--SATFKGADGKDHY-VQMGSYGIGAM 322 DS +G + GT + LP+ + GADG+ H + + G++ Sbjct: 469 DS-------------IGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRVAFGSI 515 Query: 323 -RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 R + +IE +P +AP ++ +I I D K+ L G Sbjct: 516 ERFIGILIEHFAGA----FPTWLAPVQVEVIPISDKH---LDYANKVLDTLKAAGIRADI 568 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 D E++G + A L P ++VG K + V ++ R G M L++ + Sbjct: 569 DTRAEKMGYKIREAQLQKIPYMLVVGGKEEENEAVSVRSRFKGDEGQMKLDDFLAAIKEE 628 Query: 442 FSN--NRPV 448 +N NR V Sbjct: 629 IANRENRKV 637 >gi|71984184|ref|NP_001022033.1| Threonyl tRNA Synthetase family member (trs-1) [Caenorhabditis elegans] gi|1711653|sp|P52709|SYTC_CAEEL RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|3875006|emb|CAA93762.1| C. elegans protein C47D12.6a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 725 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 89/420 (21%), Positives = 173/420 (41%), Gaps = 61/420 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 HQ S G W P G + + IR++ R G E+ P + + LW SG + Y Sbjct: 333 FFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNMYNKKLWETSGHWQHYS 392 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 ++M ++ ++ + P + +F +Y LPF F + R+E+ G+ Sbjct: 393 EDMFKIEVEKEEFGL-KPMNCPGHCLMFGHMPHTYNELPFRFADFGVLHRNEMSGALTGL 451 Query: 150 MRSREFLMKDAYSF---DLTPEGSKHSYNKMFVSYLRIF---HRLGLKSIPMRAESGPIG 203 R R F DA+ F D E K + + +Y ++F +L L + P G +G Sbjct: 452 TRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEKVFGFTFKLNLSTRP----EGFLG 507 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYA 257 I D E D +LN+ +W A Y Sbjct: 508 N------IETWDKAEA--------------------DLTNALNASGRKWVLNPGDGAFYG 541 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D+L N + + ++ F ++ L + F K V + Sbjct: 542 PKIDI---TIQDALKRNFQCATIQLD----FQLPNQFDL---SYFDEKGEKQRPVMIHRA 591 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 +G++ + A++ S+ GK WP ++P + +I + H+ V RD + ++ + G Sbjct: 592 VLGSVERMTAILTESYGGK---WPFWLSPRQCKIITV--HESV-RDYANDVKKQIFEAGF 645 Query: 378 DV-FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 ++ + ++ G+ + Q A L F +++G+K + V ++ R +R +++L+++I+ Sbjct: 646 EIEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVALDKLIS 705 >gi|240080190|ref|ZP_04724733.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19] Length = 648 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 266 LQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 441 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 442 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYRVKDALGRSWQCGTLQLDFVLPE 501 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 502 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 532 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 533 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 585 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 586 EKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 621 >gi|291559712|emb|CBL38512.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [butyrate-producing bacterium SSC/2] Length = 641 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 100/429 (23%), Positives = 167/429 (38%), Gaps = 55/429 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ + G +LP G + + RE + G +E+S P + S LW SG +D Y Sbjct: 253 MMREEGPGFPFFLPKGMVLKNTLLDYWREIHQKAGYVEISTPIMLSRHLWETSGHWDHY- 311 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +D+ P + ++ S +SYR+LP ++ L R E + G+ Sbjct: 312 KENMYTTVIDDQDFAIKPMNCPGGVLVYDSEPRSYRDLPLRMGELGLVHRHEKSGQLHGL 371 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F DA+ F +TP+ K + ++++ G K Sbjct: 372 MRVRCFTQDDAHIF-MTPDQIKDEIKGVAGLIDQVYNLFGFK------------------ 412 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT-APYAATSDVHNEKLF 268 + V T S + + S DD + L+ +V + A Y D H E Sbjct: 413 YHVELSTRPDDSMGSDEDWELATDSLRAALDD-LGLDYVVNEGDGAFYGPKIDFHLE--- 468 Query: 269 DSLPENKRVSARGIEVGHIFYFGT---KYSLPM--SATFKGADGKDHY-VQMGSYGIGAM 322 DS +G + GT + LP+ + GADG+ H + + G++ Sbjct: 469 DS-------------IGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRVAFGSI 515 Query: 323 -RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 R + +IE +P +AP ++ +I I D K+ L G Sbjct: 516 ERFIGILIEHFAGA----FPTWLAPVQVEVIPISDKH---LDYANKVLDTLKAAGIRADI 568 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 D E++G + A L P ++VG K + V ++ R G M L++ + Sbjct: 569 DTRAEKMGYKIREAQLQKIPYMLVVGGKEEENGAVSVRSRFKGDEGQMKLDDFLAAIKEE 628 Query: 442 FSN--NRPV 448 +N NR V Sbjct: 629 IANRENRKV 637 >gi|261367962|ref|ZP_05980845.1| proline--tRNA ligase [Subdoligranulum variabile DSM 15176] gi|282569944|gb|EFB75479.1| proline--tRNA ligase [Subdoligranulum variabile DSM 15176] Length = 479 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 85/407 (20%), Positives = 156/407 (38%), Gaps = 71/407 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLR 95 KG P G +N+ + TG +++P L L + G + + E+ Sbjct: 39 KGFVVLRPYGYAIWENIQKNLDARFKATGHENVAMPMLMPESLLKKEGELVNGFAPEVAW 98 Query: 96 L----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + ++ ++ + PT E + D F + SYR+LP + Q +++ RP Sbjct: 99 VTMGGSEPLEERLAVRPTSETLFCDHFSHVLHSYRDLPMLYNQWCSVVRWEKSTRP---F 155 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+REF ++ ++ T E +K + Y Sbjct: 156 LRTREFWWQEGHTIHETAEEAKAETEQQLNCY---------------------------- 187 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 AD FC D I TD + A Y + + + K Sbjct: 188 ----AD------FCENDLCIPVIKGRKTDKEKFAGAE-------ATYTIEAMMKDGKALQ 230 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 S G YFG K+S TF G D Y S+G + R++ A+I Sbjct: 231 S--------------GTSHYFGDKFSRAYDVTFTGRDNTLQYPFQTSWGASS-RLIGAII 275 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + D G+I P ++AP ++ ++ + AH + ++ A + K V DD +Q G Sbjct: 276 MTHGDDDGLILPPAIAPVQVVIVPVAAHKPGVLEKSRELAAEIGKYA-RVKLDDSDKQPG 334 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +FA ++ G P+++ VG + + + + R T ++ + E++ + Sbjct: 335 WKFAQWEMKGVPIRLEVGPRDIEQGQCVLVRRDTREKQFVKFEDLAS 381 >gi|82753710|ref|XP_727786.1| prolyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL] gi|23483805|gb|EAA19351.1| prolyl-tRNA synthetase-related [Plasmodium yoelii yoelii] Length = 583 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 25/238 (10%) Query: 4 SKY-FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +KY F I +N + + +L+ R I + + G+Y+ LPLG + ++ + I Sbjct: 119 TKYIFNKIFNDNIKQNGDKASELLFRANYIKEIN-GLYNMLPLGMRVINKIKDFINNYLE 177 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRN-----------------DKAMI 105 + + + + LQ LW S R Y +E L + + D I Sbjct: 178 KINSHSVFLSILQPKRLWNISDRSKLYSEEFLYVYKQKQQKVDTDLGEIIKKKYEDDGNI 237 Query: 106 YGPTHEEV----MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAY 161 PT EE+ + +++ + + +N P +Q KFR+E R + +S+EFLMKD Y Sbjct: 238 LSPTCEEIALTLINEVYNLN-ATEKNFPLLIHQYNYKFRNEKRLEKSLFKSKEFLMKDGY 296 Query: 162 SFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL-SHEFIVLADTGE 218 SF + Y Y IF++LGL ++ L SHE+ +L G+ Sbjct: 297 SFHANKKCMDEIYEIYKECYKNIFNKLGLTYRIIKKRKKDKMNALESHEYQILCRDGK 354 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 35/170 (20%) Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 E HIF G YS ++ + + + MGSYGIG R++ +I++ +D GI P+ Sbjct: 357 EGAHIFKLGDYYSKKLNINYLNKKNEKKNIYMGSYGIGINRLLYFLIDNFYDENGIKLPN 416 Query: 343 SVAPFKISLINIKAHDQVCRDACEKI---------------------------------Y 369 +APF I LI + + KI Y Sbjct: 417 QIAPFSIYLIQTNQKSKYSSEKVNKIVNELRKEIINDNNTTLYNSLNSNDIEYILTIWLY 476 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 L + D ++D+ + + DL+G +VI+ K SD K +IK Sbjct: 477 TILKENDIDTYYDNTDLHLSRKLKNCDLIGASNRVIINLK--SDEKKKIK 524 >gi|323333769|gb|EGA75160.1| YER087W-like protein [Saccharomyces cerevisiae AWRI796] Length = 294 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH-YVQMGSYGI 319 D ++ E + + IEVGHIF G KYS P++ F + K+ +V MG YGI Sbjct: 196 DAQENEICGKCEEGRLEPLKSIEVGHIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGI 255 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 G R+V A+ E D G WP +AP+K+S+ Sbjct: 256 GVSRLVGAIAELGRDSNGFRWPAIMAPYKVSIC 288 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 40/69 (57%) Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 MKDAYSF E + S+ K+ +Y +IF L + + A+SG IGG+ S EF ++ ++ Sbjct: 1 MKDAYSFASNEEDAFASFQKLDDTYNKIFKDLKIPFVSAWADSGDIGGEFSKEFHLIHES 60 Query: 217 GETQVFCSK 225 GE + K Sbjct: 61 GEDTLMSCK 69 >gi|315652419|ref|ZP_07905407.1| proline--tRNA ligase [Eubacterium saburreum DSM 3986] gi|315485318|gb|EFU75712.1| proline--tRNA ligase [Eubacterium saburreum DSM 3986] Length = 479 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 1/166 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YFG ++ + TF D + V S+G+ R++ AVI D G+ Sbjct: 225 GKALQSGTSHYFGDGFAKAFNVTFTDKDNQVKPVFETSFGM-TTRIIGAVIMVHGDNSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 P +AP ++++I + AH + DA +Y RL G V D+ + G +FA +++ Sbjct: 284 KLPPHIAPVQVNIIPVAAHKEGVLDAANTLYDRLKVAGLRVKLDNSEKSPGFKFAESEMR 343 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL++ +G K + +++ R TG + +SL+ V A N Sbjct: 344 GIPLRIEIGPKDIENNQCVFVRRDTGEKSFVSLDNVEGDAKDCLEN 389 Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 73/171 (42%), Gaps = 11/171 (6%) Query: 25 LMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVE 82 ++L+ ++ S KG P G +N+ I TG +P + + L E Sbjct: 25 IVLKAELVDYTSVKGCLVIRPAGYAIWENMKNEIDRRFKETGIENCYLPMFIPESLLQKE 84 Query: 83 SGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ-- 136 + + + E+ + ++ D+ + PT E + D + +KSYR+LP Q Sbjct: 85 ADHVEGFAPEVAWVTYGGMEKLDERLCVRPTSETLFCDYYAGAVKSYRDLPQLLNQWCSV 144 Query: 137 LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 +++ RP +RSREFL ++ ++ T + + +M Y F + Sbjct: 145 VRWEKTTRP---FLRSREFLWQEGHTVHATAKEAHDRTVQMLDVYADFFEK 192 >gi|325197939|gb|ADY93395.1| threonyl-tRNA synthetase [Neisseria meningitidis G2136] Length = 637 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 83/396 (20%), Positives = 151/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEKRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 431 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G V D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQLVIMNITENQA---DYCREVAAKLQAAGFRVELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|332201058|gb|EGJ15129.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA47901] Length = 647 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 159/399 (39%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GAD +DH M G I Sbjct: 474 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADSEDHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVR 616 >gi|218249438|ref|YP_002374917.1| prolyl-tRNA synthetase [Borrelia burgdorferi ZS7] gi|226321716|ref|ZP_03797242.1| prolyl-tRNA synthetase [Borrelia burgdorferi Bol26] gi|259511576|sp|B7J1X2|SYP_BORBZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218164626|gb|ACK74687.1| prolyl-tRNA synthetase [Borrelia burgdorferi ZS7] gi|226232905|gb|EEH31658.1| prolyl-tRNA synthetase [Borrelia burgdorferi Bol26] Length = 488 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 98/428 (22%), Positives = 173/428 (40%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L + L E D + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDVYKRF------------------------IEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG++ P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D C+ + L K G V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYCDCVVDALKKAGFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTISRR 365 >gi|323345462|ref|ZP_08085685.1| proline--tRNA ligase [Prevotella oralis ATCC 33269] gi|323093576|gb|EFZ36154.1| proline--tRNA ligase [Prevotella oralis ATCC 33269] Length = 493 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 10/201 (4%) Query: 249 VEQWTA-PYAATSDVHNEKLFDSLP----ENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 EQW A P E+ +L E + ++ G + G ++ T+ Sbjct: 201 AEQWMAVPVLQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAKSFDVTYL 260 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA---HDQV 360 + K YV S+G+ + R++ A+I + D G++ P +AP ++ +I I Q Sbjct: 261 NKENKPEYVWATSWGV-STRLIGALIMTHSDDNGLVLPPRLAPIQVVIIPITKGIEQLQA 319 Query: 361 CRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 I A L ++G +V +DD ++ G +FA +L G P+++++G + + D+ +E+ Sbjct: 320 ISAKLSPIIASLRELGINVKYDDTDNKRPGFKFADYELKGVPVRLVMGGRDLEDNTIEVM 379 Query: 420 HRLTGIREDMSLEEVINYASH 440 R T +E +SL+ +++Y H Sbjct: 380 RRDTLEKETVSLDGIVDYVKH 400 Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 99 RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMK 158 R D+ +I PT E ++ + +++ I S+R+LP Q R E+R R +R+ EFL + Sbjct: 116 RLDEELIIRPTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMRTR-PFLRTSEFLWQ 174 Query: 159 DAYS 162 + ++ Sbjct: 175 EGHT 178 >gi|270293200|ref|ZP_06199411.1| threonine--tRNA ligase [Streptococcus sp. M143] gi|270279179|gb|EFA25025.1| threonine--tRNA ligase [Streptococcus sp. M143] Length = 647 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 88/399 (22%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P + S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPIASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 REDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|168183457|ref|ZP_02618121.1| threonine--tRNA ligase [Clostridium botulinum Bf] gi|237796594|ref|YP_002864146.1| threonyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] gi|259516348|sp|C3KTK0|SYT_CLOB6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|182673322|gb|EDT85283.1| threonine--tRNA ligase [Clostridium botulinum Bf] gi|229263282|gb|ACQ54315.1| threonine--tRNA ligase [Clostridium botulinum Ba4 str. 657] Length = 635 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 100/411 (24%), Positives = 160/411 (38%), Gaps = 49/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH+ G + P G + + REE + G E+ P + + LW +SG +D Y K Sbjct: 255 IHEEGPGFPFFHPKGMIIRNILENFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + +D P + ++++ + SYR+LP ++ + R EL G+M Sbjct: 314 ENMYFTNIDDGDYAIKPMNCPGGILVYKNSMHSYRDLPLRLSELGIVHRHELSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ + +T E K + + + F++L E+ Sbjct: 374 RVRCFTQDDAHLY-MTKEQIKEEIVGI-IKLIDKFYKL-----------------FGFEY 414 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 V T S + + D I + E A Y D H L D Sbjct: 415 FVELSTRPEDSMGSDEDWEIATNGLREALDSIGKEYRVNEGDGAFYGPKIDFH---LKDC 471 Query: 271 LPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRV 324 + R + G I F ++ L ++ GADG+ H V YG R Sbjct: 472 I-------GRTWQCGTIQLDFQMPERFDL----SYIGADGEKHRPVMVHRTIYG-SVERF 519 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 + +IE +P +AP ++ L+NI D +K+ L + V D Sbjct: 520 IGILIEQYAGA----FPTWLAPVQVKLMNIT---DAQYDYLKKVEEALKENNIRVEIDTR 572 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + A L P +I+G K V KV ++ R G +SLEE I Sbjct: 573 NEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFI 623 >gi|323490461|ref|ZP_08095668.1| threonyl-tRNA synthetase [Planococcus donghaensis MPA1U2] gi|323395865|gb|EGA88704.1| threonyl-tRNA synthetase [Planococcus donghaensis MPA1U2] Length = 642 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 89/406 (21%), Positives = 176/406 (43%), Gaps = 40/406 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ R G + P + S +L+ SG +D Y ++M + Sbjct: 264 QGLPMWLPKGATIRRIIERYIVDKEERLGYDHVYTPVMGSVELYKTSGHWDHYQEDMFPV 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P + IF+ I SYR +P ++ L R E+ G+ R R Sbjct: 324 MKMDNEELVLRPMNCPHHMMIFKQGIHSYRQMPVRIAELGLMHRYEMSGALSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ + ++ + R LS+ D Sbjct: 384 TLNDAHLF-VRPDQIKEEFKRVVNLIVEVYKDFNINDYSFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M + + D + ++ I VE A Y DV ++ +L + Sbjct: 429 PEDKEKYFDDDAMWNRAQAMLKEAMDELDVDYIEVEGEAAFYGPKVDV---QVKTALGKE 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L ++ G DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPERFDL----SYIGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY 537 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ LI ++ AH ++ EK+ + K+ D+ D+ E++G Sbjct: 538 ---KG-AFPTWLAPVQVELIPVSLDAHSAYTKELQEKLQSH--KIRVDI--DERDEKLGY 589 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + A + P +++G K + D V ++ E M E+ + Sbjct: 590 KIREAQMQKVPYMLVLGDKELEDGSVNVRKYGEQKSESMPFEDFVK 635 >gi|149373221|ref|ZP_01892041.1| prolyl-tRNA synthetase [unidentified eubacterium SCB49] gi|149354255|gb|EDM42826.1| prolyl-tRNA synthetase [unidentified eubacterium SCB49] Length = 492 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 69/355 (19%), Positives = 155/355 (43%), Gaps = 65/355 (18%) Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 ++ GK ++ + ++ +I PT E ++ ++ ++SYR+LP Q R E+R R Sbjct: 102 ENAGKLIVDPNAKLEEELIVRPTSEAIIWSTYKGWVQSYRDLPLLINQWANVVRWEMRTR 161 Query: 147 FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 +R+ EFL ++ ++ T + + +M Y Sbjct: 162 L-FLRTAEFLWQEGHTAHTTKKEAIEESERMMNVYA------------------------ 196 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 +F+ +DFM P+ + L + E+ +A + + Sbjct: 197 --DFV-------------QDFMAIPV---------VKGLKTESER----FAGAEETY--- 225 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 ++L ++ + ++ G + G ++ F +GK YV S+G+ + R++ Sbjct: 226 CIEALMQD----GKALQAGTSHFLGQNFAKAFDVKFATKEGKQEYVWGTSWGV-STRLMG 280 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ---VCRDACEKIYARLSKVGCDVFWDD 383 A++ + D KG++ P ++AP ++ ++ I +D+ +A ++ A L G V +D+ Sbjct: 281 ALVMTHSDDKGLVLPPNLAPDQVVIVPIYRNDEQFDAVSEAANELMAALRAKGVRVKFDN 340 Query: 384 M-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 + G +F +L G P+++ +G K + + E+ R T +E +S + ++++ Sbjct: 341 RDTHKPGWKFNEYELKGVPVRIAIGPKDLENGTFEVARRDTLTKEVLSKDVIVDH 395 >gi|260441039|ref|ZP_05794855.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|268600819|ref|ZP_06134986.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|268584950|gb|EEZ49626.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18] Length = 637 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 83/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 431 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R V Sbjct: 491 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFV 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 610 >gi|240117427|ref|ZP_04731489.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1] Length = 648 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 85/398 (21%), Positives = 153/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 266 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 441 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 + A+ G E C ++ + +P E + I +++ W V Sbjct: 442 DVWDKAEQGLREALTACGVEWGE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 499 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 500 PERLDAEYVTENNDRARPVML-------------------------HRAILGSLE----R 530 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 V +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 531 FVGILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDL 583 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 584 RNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 621 >gi|268603124|ref|ZP_06137291.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|268587255|gb|EEZ51931.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1] Length = 637 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 83/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 431 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R V Sbjct: 491 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFV 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 610 >gi|300727040|ref|ZP_07060459.1| proline--tRNA ligase [Prevotella bryantii B14] gi|299775584|gb|EFI72175.1| proline--tRNA ligase [Prevotella bryantii B14] Length = 493 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 69/339 (20%), Positives = 154/339 (45%), Gaps = 65/339 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ I S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEELIIRPTSETIIWNTYKNWIHSWRDLPIKCNQWCNVMRWEMRTR-PFLRTSEFLWQEG 176 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T R E+ + D+ H V AD E Sbjct: 177 HTAHAT-----------------------------REEAEKMAQDMLH---VYADFAEK- 203 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 +M P+ I + S E+ +A D + +++ ++ + Sbjct: 204 ------YMAVPV---------IQGVKSETER----FAGALDTYT---IEAMMQD----GK 237 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ T+ + K YV S+G+ + R++ A+I + D G++ Sbjct: 238 ALQSGTSHFLGQNFAKSFDVTYLTKENKPEYVWATSWGV-STRLMGALIMTHSDDNGLVL 296 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 P +AP ++ +I I +D+ +K + +L+++G V +DD ++ G ++A + Sbjct: 297 PPKLAPVQVVIIPIYKNDEQHEQLNQKLQPVIDQLTELGVSVKYDDADNKRPGFKYADYE 356 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L G P+++++G + + ++ +E+ R T +E+++ + ++ Sbjct: 357 LKGVPVRLVMGGRDLENNTIEVMRRDTLEKENVTFDGIV 395 >gi|22536875|ref|NP_687726.1| threonyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76787804|ref|YP_329459.1| threonyl-tRNA synthetase [Streptococcus agalactiae A909] gi|76799413|ref|ZP_00781564.1| threonyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77405954|ref|ZP_00783034.1| threonyl-tRNA synthetase [Streptococcus agalactiae H36B] gi|77413516|ref|ZP_00789706.1| threonyl-tRNA synthetase [Streptococcus agalactiae 515] gi|73919828|sp|Q8E0L9|SYT_STRA5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123771973|sp|Q3K1Z4|SYT_STRA1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|22533725|gb|AAM99598.1|AE014224_1 threonyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76562861|gb|ABA45445.1| threonyl-tRNA synthetase [Streptococcus agalactiae A909] gi|76585236|gb|EAO61843.1| threonyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77160460|gb|EAO71581.1| threonyl-tRNA synthetase [Streptococcus agalactiae 515] gi|77175465|gb|EAO78254.1| threonyl-tRNA synthetase [Streptococcus agalactiae H36B] Length = 647 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 91/404 (22%), Positives = 166/404 (41%), Gaps = 37/404 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ +G + P + S + + SG +D Y ++M Sbjct: 259 QGLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPMASVEFYKTSGHWDHYREDMFPT 318 Query: 97 ADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D D + + P + ++++ H+ SYR LP ++ + R E G+ R RE Sbjct: 319 MDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAELGMMHRYEKSGALTGLQRVRE 378 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVL 213 + DA+ F +TPE K + K I+ L R + P + H++ Sbjct: 379 MTLNDAHIF-VTPEQIKDEFLKALNLIAEIYEDFNLTDYRFRLSYRDP---EDKHKYYDN 434 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLP 272 + E K+ MD DF L+ E A Y D+ ++ +L Sbjct: 435 DEMWENAQAMLKEAMD--------DF----GLDYFEAEGEAAFYGPKLDI---QVKTALG 479 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIES 331 + +S ++ F ++ L + GADG++H + + GI M A++ Sbjct: 480 NEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPIMIHRGGISTMERFTAILIE 531 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++ G W +AP ++S+I I + D ++ L G DD E++ + Sbjct: 532 TYKGAFPTW---LAPQQVSVIPISNEAHI--DYAWEVARVLKDRGIRAEVDDRNEKMQYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A P Q+IVG K + + V ++ + E S+EE + Sbjct: 587 IRAAQTQKIPYQLIVGDKEMEEKAVNVRRYGSKATETKSIEEFV 630 >gi|25010739|ref|NP_735134.1| threonyl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|77410759|ref|ZP_00787117.1| threonyl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|73919827|sp|Q8E693|SYT_STRA3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|23095093|emb|CAD46328.1| theronyl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|77163138|gb|EAO74091.1| threonyl-tRNA synthetase [Streptococcus agalactiae CJB111] Length = 647 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 91/404 (22%), Positives = 166/404 (41%), Gaps = 37/404 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ +G + P + S + + SG +D Y ++M Sbjct: 259 QGLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPMASVEFYKTSGHWDHYREDMFPT 318 Query: 97 ADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D D + + P + ++++ H+ SYR LP ++ + R E G+ R RE Sbjct: 319 MDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAELGMMHRYEKSGALTGLQRVRE 378 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVL 213 + DA+ F +TPE K + K I+ L R + P + H++ Sbjct: 379 MTLNDAHIF-VTPEQIKDEFLKALNLIAEIYEDFNLTDYRFRLSYRDP---EDKHKYYDN 434 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLP 272 + E K+ MD DF L+ E A Y D+ ++ +L Sbjct: 435 DEMWENAQAMLKEAMD--------DF----GLDYFEAEGEAAFYGPKLDI---QVKTALG 479 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIES 331 + +S ++ F ++ L + GADG++H + + GI M A++ Sbjct: 480 NEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPIMIHRGGISTMERFTAILIE 531 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++ G W +AP ++S+I I + D ++ L G DD E++ + Sbjct: 532 TYKGAFPTW---LAPQQVSVIPISNEAHI--DYAWEVARVLKDRGIRAEVDDRNEKMQYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A P Q+IVG K + + V ++ + E S+EE + Sbjct: 587 IRAAQTQKIPYQLIVGDKEMEEKAVNVRRYGSKATETKSIEEFV 630 >gi|240115143|ref|ZP_04729205.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|291044371|ref|ZP_06570080.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|291011265|gb|EFE03261.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] Length = 648 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 83/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 266 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 441 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 442 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 501 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R V Sbjct: 502 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFV 532 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 533 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 585 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 586 EKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 621 >gi|293399557|ref|ZP_06643710.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae F62] gi|291610126|gb|EFF39248.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae F62] Length = 648 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 266 LQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 441 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 442 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 501 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 502 RLDAEYVTENNDRARPVML-------------------------HRAILGSLE----RFI 532 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 533 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 585 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 586 EKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 621 >gi|149182849|ref|ZP_01861310.1| threonyl-tRNA synthetase [Bacillus sp. SG-1] gi|148849464|gb|EDL63653.1| threonyl-tRNA synthetase [Bacillus sp. SG-1] Length = 643 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 90/404 (22%), Positives = 168/404 (41%), Gaps = 36/404 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ + G + P + S DL+ SG +D Y + M + Sbjct: 264 QGLPMWLPKGATIRRIIERYIVDKEEKLGYDHVYTPVMGSVDLYKTSGHWDHYQENMFPV 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D +++ ++ P + I+++ I SYR LP ++ R E+ G+ R R Sbjct: 324 MDMDNEQLVLRPMNCPHHMMIYKNSIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ L ++ L R LS+ D Sbjct: 384 TLNDAHLF-VRPDQIKEEFKRVVRLVLEVYKDFDLNDYSFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M + D + ++ E A Y DV ++ +L + Sbjct: 429 PQDTEKYFDDDEMWNKAQQMLKEAMDEMEIDYFEAEGEAAFYGPKLDV---QVKTALGKE 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPERFDL----TYIGEDGKHHRPVVIHRGVVSTMERFVAFLIEEY 537 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ +I + V D +K+ L G V D E+IG + Sbjct: 538 ---KG-AFPTWLAPVQVQVIPVSP--DVHFDYAKKVQEELQAQGLRVELDSRDEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A + P ++VG + + V ++ E +SL + + Sbjct: 592 REAQMSKIPYMLVVGDNEIQEEAVNVRKYGEQKSETVSLSDFVQ 635 >gi|322377382|ref|ZP_08051873.1| threonine--tRNA ligase [Streptococcus sp. M334] gi|321281582|gb|EFX58591.1| threonine--tRNA ligase [Streptococcus sp. M334] Length = 647 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 88/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D + + + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPEDKEKYFDNDQM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|154495989|ref|ZP_02034685.1| hypothetical protein BACCAP_00272 [Bacteroides capillosus ATCC 29799] gi|150274872|gb|EDN01928.1| hypothetical protein BACCAP_00272 [Bacteroides capillosus ATCC 29799] Length = 586 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 108/435 (24%), Positives = 175/435 (40%), Gaps = 45/435 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L T M G +LP G + + R+ + G Sbjct: 181 YLQRIEEAKKRDHRKLGKELGLFTLM--DEGPGFPFFLPNGMVLRNTLIDYWRQIHKKYG 238 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 +E+S P + + LW SG +D Y M + D D A+ P + ++++ S Sbjct: 239 YVEISTPMMLNRQLWERSGHWDHYKNNMYTTVIDGEDFAI--KPMNCPGGMLVYKTEPHS 296 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ L R EL G+ R R F DA+ F +T E K + + Sbjct: 297 YRDLPLRVGELGLVHRHELSGALHGLFRVRCFTQDDAHVF-MTREQMKDVIQETVRLFDE 355 Query: 184 IFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ GL +I + + + I + E ++D + I +F Sbjct: 356 VYSTFGLNYTIELST--------MPEDHIGTVEEWER----NQDILKNAITDMGKEF--- 400 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D H L DSL R + G I ++ + Sbjct: 401 ----VINEGDGAFYGPKLDFH---LADSL-------GRTWQCGTI-QLDSQLPERFELEY 445 Query: 303 KGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 GADG+ H V + +G++ VI G W ++P ++S++ I D+ Sbjct: 446 TGADGEKHRPVMIHRVVLGSIERFIGVITEHFAGAFPAW---LSPVQVSILPIT--DRTA 500 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + A E + A L K G V D E+IG + A L P +++G K + V +++R Sbjct: 501 QYADE-VKALLEKAGFRVEVDHRNEKIGKKIREAQLKKVPYMLVLGDKEAEGATVAVRNR 559 Query: 422 LTGIREDMSLEEVIN 436 G + MSL+E IN Sbjct: 560 AGGDQGAMSLDEFIN 574 >gi|71984192|ref|NP_001022034.1| Threonyl tRNA Synthetase family member (trs-1) [Caenorhabditis elegans] gi|30145813|emb|CAD89723.1| C. elegans protein C47D12.6b, confirmed by transcript evidence [Caenorhabditis elegans] Length = 684 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 89/420 (21%), Positives = 173/420 (41%), Gaps = 61/420 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 HQ S G W P G + + IR++ R G E+ P + + LW SG + Y Sbjct: 292 FFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNMYNKKLWETSGHWQHYS 351 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 ++M ++ ++ + P + +F +Y LPF F + R+E+ G+ Sbjct: 352 EDMFKIEVEKEEFGL-KPMNCPGHCLMFGHMPHTYNELPFRFADFGVLHRNEMSGALTGL 410 Query: 150 MRSREFLMKDAYSF---DLTPEGSKHSYNKMFVSYLRIF---HRLGLKSIPMRAESGPIG 203 R R F DA+ F D E K + + +Y ++F +L L + P G +G Sbjct: 411 TRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEKVFGFTFKLNLSTRP----EGFLG 466 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYA 257 I D E D +LN+ +W A Y Sbjct: 467 N------IETWDKAEA--------------------DLTNALNASGRKWVLNPGDGAFYG 500 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D+L N + + ++ F ++ L + F K V + Sbjct: 501 PKIDI---TIQDALKRNFQCATIQLD----FQLPNQFDL---SYFDEKGEKQRPVMIHRA 550 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 +G++ + A++ S+ GK WP ++P + +I + H+ V RD + ++ + G Sbjct: 551 VLGSVERMTAILTESYGGK---WPFWLSPRQCKIITV--HESV-RDYANDVKKQIFEAGF 604 Query: 378 DV-FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 ++ + ++ G+ + Q A L F +++G+K + V ++ R +R +++L+++I+ Sbjct: 605 EIEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVALDKLIS 664 >gi|160934880|ref|ZP_02082266.1| hypothetical protein CLOLEP_03755 [Clostridium leptum DSM 753] gi|156866333|gb|EDO59705.1| hypothetical protein CLOLEP_03755 [Clostridium leptum DSM 753] Length = 478 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 80/398 (20%), Positives = 155/398 (38%), Gaps = 71/398 (17%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLRLADRNDK 102 P G +N+ I+ E G +++P + + L E + + E+ + ++ Sbjct: 45 PYGWAIWENIRDILDHEFKELGHENVAMPLFIPESLLQKEKDHVEGFAPEVAWVTHGGEE 104 Query: 103 AM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFL 156 + PT E + D +++ I S+R+LP + Q +++ RP +RS EF Sbjct: 105 ELPERLCVRPTSETLFCDHYKNIIHSWRDLPKLYNQWCSVVRWEKTTRP---FLRSVEFY 161 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 ++ ++ T + + +M Y AD Sbjct: 162 WQEGHTMHATAQEAMEETERMLNVY--------------------------------AD- 188 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 FC K + T + A Y + +H+ K S Sbjct: 189 -----FCEKQLAIPVVKGRKTKKEQFAGAE-------ATYTIEALMHDGKALQS------ 230 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 G YFG ++ T+ + K Y S+G+ + R++ +I + D Sbjct: 231 --------GTSHYFGDGFARAFEITYTDKENKPQYPHQTSWGM-STRIIGGIIMTHGDDN 281 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G++ P +VAP ++ +I I H + E++ ARL K+ C V DD + G +F+ + Sbjct: 282 GLVLPPAVAPIQVMIIPIAQHKPGVLEKAEELRARLKKI-CRVRMDDSEQSPGWKFSQYE 340 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G PL++ +G K + ++ + R + +SL+E+ Sbjct: 341 MKGVPLRLEIGPKDIEKNQCVLVRRDNREKTFVSLDEL 378 >gi|319744717|gb|EFV97060.1| threonine--tRNA ligase [Streptococcus agalactiae ATCC 13813] Length = 647 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 91/404 (22%), Positives = 166/404 (41%), Gaps = 37/404 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ +G + P + S + + SG +D Y ++M Sbjct: 259 QGLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPMASVEFYKTSGHWDHYREDMFPT 318 Query: 97 ADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D D + + P + ++++ H+ SYR LP ++ + R E G+ R RE Sbjct: 319 MDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAELGMMHRYEKSGALTGLQRVRE 378 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVL 213 + DA+ F +TPE K + K I+ L R + P + H++ Sbjct: 379 MTLNDAHIF-VTPEQIKDEFLKALNLIAEIYEDFNLTDYRFRLSYRDP---EDKHKYYDN 434 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLP 272 + E K+ MD DF L+ E A Y D+ ++ +L Sbjct: 435 DEMWENAQAMLKEAMD--------DF----GLDYFEAEGEAAFYGPKLDI---QVKTALG 479 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIES 331 + +S ++ F ++ L + GADG++H + + GI M A++ Sbjct: 480 NEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPIMIHRGGISTMERFTAILIE 531 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++ G W +AP ++S+I I + D ++ L G DD E++ + Sbjct: 532 TYKGAFPTW---LAPQQVSVIPISNEAHI--DYAWEVARVLKDRGIRAEVDDRNEKMQYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A P Q+IVG K + + V ++ + E S+EE + Sbjct: 587 IRAAQTQKIPYQLIVGDKEMEEKGVNVRRYGSKATETKSIEEFV 630 >gi|226324523|ref|ZP_03800041.1| hypothetical protein COPCOM_02307 [Coprococcus comes ATCC 27758] gi|225206971|gb|EEG89325.1| hypothetical protein COPCOM_02307 [Coprococcus comes ATCC 27758] Length = 643 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 95/413 (23%), Positives = 164/413 (39%), Gaps = 51/413 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ + G +LP G + + + RE + G +E+S P + S LW SG +D Y Sbjct: 253 MMREEGPGFPFFLPKGMELKNQLLDYWREIHKKAGYVEISTPIMLSRHLWETSGHWDHY- 311 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 K+ + +D+ P + ++ S +SYR+LP ++ L R E + G+ Sbjct: 312 KDNMYTTVIDDEDFAIKPMNCPGGILVYESEPRSYRDLPLRMGELGLVHRHEKSGQLHGL 371 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F DA+ F +TPE + + ++ G K Sbjct: 372 MRVRCFTQDDAHIF-MTPEQVRDEIKGVVKLINEVYSLFGFKY----------------- 413 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + L+ E + +D+ D + DD+ + E A Y D H E D Sbjct: 414 HVELSTRPEDSMGSDEDW-DMATEALRGALDDLGLPYVVNEGDGAFYGPKIDFHLE---D 469 Query: 270 SLPENKRVSARGIEVGHIFYFGT---KYSLPM--SATFKGADGKDHY-VQMGSYGIGAM- 322 S +G + GT + LP+ + + GADG+ H + + G++ Sbjct: 470 S-------------IGRTWQCGTIQLDFQLPLRFNLEYTGADGEKHRPIMIHRVIFGSIE 516 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 R + +IE +P +AP ++ ++ I D +K+ L+ G D Sbjct: 517 RFIGILIEHFAGA----FPTWLAPVQVKVLPISDK---YMDYAQKVLDELNNSGVRAEID 569 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + A + P ++VG+K D V I+ R G SL + + Sbjct: 570 TRAEKIGYKIREAQMKKIPYMLVVGAKEEEDGLVSIRSRFEGDEGQKSLTDFL 622 >gi|73981327|ref|XP_860843.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 6 [Canis familiaris] Length = 701 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 106/419 (25%), Positives = 173/419 (41%), Gaps = 59/419 (14%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E R G E+ PT Sbjct: 296 EAELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYTRRGFSEVKTPT 355 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 L SA LW SG ++ Y ++M L D + P + +F +S+R LP Sbjct: 356 LFSAKLWELSGHWEHYQEDMFVLHHSTD-TLALKPMNCPAHCLMFAHRPRSWRELPLRLA 414 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHS------YNKMFVSYLRIFH 186 + R E G+ R R F DA+ F P+ + + + + L Sbjct: 415 DFGVLHRAEASGSLGGLTRLRCFQQDDAHIF-CAPDQLEEEIQGCLDFLRSVYAVLGFSF 473 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 RL L + P SG +G L D E QV + +F P + D Sbjct: 474 RLALSTRP----SGFLGES------CLWDQAE-QVL-QRALEEFGEPWDLKPGDG----- 516 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SATFKG 304 A Y DVH L D+L R + G I + LP+ +KG Sbjct: 517 -------AFYGPKIDVH---LHDAL-------GRPHQCGTI---QLDFQLPLRFDLQYKG 556 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCR 362 G + V + +G++ + V+ S+ GK WP ++PF++ +I + A ++ R Sbjct: 557 QAGVLERPVLIHRAVLGSVERMLGVLAESYGGK---WPLWLSPFQVVVIPVGAEQEEYAR 613 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +A +++ A + + CD+ D G + + A L + Q +VG K S V I+ R Sbjct: 614 EAQQRLQA--AGLVCDLD-ADSGLTLSRRVRRAQLAHYNFQFVVGQKEQSKKTVNIRTR 669 >gi|299535482|ref|ZP_07048804.1| threonyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1] gi|298729243|gb|EFI69796.1| threonyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1] Length = 643 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 99/437 (22%), Positives = 189/437 (43%), Gaps = 38/437 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K+ L +L+E RD +L L T + +G+ WLP G + I +++ Sbjct: 232 KHHLQMLEEAKERDHRKIGKELELFTTS-QKVGQGLPLWLPNGATIRRVIERYIVDKELS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L S +L+ SG +D Y + + +++ +I P + ++++ + Sbjct: 291 LGYKHVYTPVLGSKELYQTSGHWDHYQDSIFPPMEMDNETLIMRPMNCPHHMMVYKNSMH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYRNLP ++ R E+ G+ R R + DA+ F + P+ K + K+ L Sbjct: 351 SYRNLPLRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIF-VRPDQIKAEFQKVVQLIL 409 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ L R LS+ D +T+ + D M S + D Sbjct: 410 EVYKDFDLHDYSFR---------LSYR-----DPADTEKYFDDDAMWEKAQSMLKEAMDE 455 Query: 243 ISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + L+ E A Y DV ++ ++ + + +S ++ F ++ L T Sbjct: 456 LGLDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----T 504 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DGK H + G+ + R VA +IE + KG +P +AP ++ +I + ++ Sbjct: 505 YVGEDGKPHRPVVIHRGVVSTMERFVAFLIE---EYKG-AFPTWLAPVQVEVIPVS--NE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++I +L+ G V DD E++G + A + P +++G K V + V ++ Sbjct: 559 AHFDYAKQIEEQLTAAGLRVEMDDREEKLGYKIREAQMKKIPYMLVIGDKEVEANGVNVR 618 Query: 420 HRLTGIREDMSLEEVIN 436 + E +S E+ ++ Sbjct: 619 RYGSKDSETISFEDFLS 635 >gi|324991486|gb|EGC23419.1| threonine--tRNA ligase [Streptococcus sanguinis SK353] Length = 647 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V D V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 616 >gi|317471544|ref|ZP_07930893.1| threonyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] gi|316900979|gb|EFV22944.1| threonyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] Length = 539 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 99/412 (24%), Positives = 167/412 (40%), Gaps = 49/412 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ G +LP G + + RE N+ G +E+S P + S LW SG +D Y Sbjct: 149 MMRDEGPGFPFFLPNGMVLKNTLLDYWREIHNKAGYVEISSPIMLSRHLWETSGHWDHYQ 208 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M + D D A+ P + +++S +SYR+LP ++ L R E + G Sbjct: 209 ENMYTTVIDEEDFAI--KPMNCPGGVLVYQSEPRSYRDLPLRMGELGLVHRHEKSGQLHG 266 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 +MR R F DA+ F + PE K + +++ G K Sbjct: 267 LMRVRCFTQDDAHIF-MMPEQIKDEIKGVAALIDQVYSLFGFKY---------------- 309 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT-APYAATSDVHNEKL 267 + L+ E + +D+ + S + DD + L+ +V + A Y D H E Sbjct: 310 -HVELSTRPEDSMGSDEDW-EMATDSLRSALDD-LGLDYVVNEGDGAFYGPKIDFHLE-- 364 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SATFKGADGKDHY-VQMGSYGIGAM-R 323 DS+ R + G I + LP+ + GADG+ H + + G++ R Sbjct: 365 -DSI-------GRTWQCGTI---QLDFQLPLRFDLHYTGADGEKHRPIMIHRVAFGSIER 413 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE +P +AP ++ +I I + K+ L G D Sbjct: 414 FIGILIEHFAGA----FPTWLAPVQVKVIPISDKH---LEYGTKVLDALKAAGIRAEIDT 466 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++G + A L P ++VG K + V ++ R G MSL++ I Sbjct: 467 RAEKMGYKIREAQLHKIPYMLVVGGKEEENQAVSVRSRFKGDEGQMSLDDFI 518 >gi|256810346|ref|YP_003127715.1| prolyl-tRNA synthetase [Methanocaldococcus fervens AG86] gi|256793546|gb|ACV24215.1| prolyl-tRNA synthetase [Methanocaldococcus fervens AG86] Length = 455 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 98/420 (23%), Positives = 160/420 (38%), Gaps = 73/420 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG +LP G K IIR+ +++G E P L DL E+ + E+ Sbjct: 24 KGCGVYLPYGFKIRRYTFEIIRDLLDKSGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYW 83 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D + PT E + + + +K + +LP YQI FR E + ++R Sbjct: 84 VTHGGKTPLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIR 143 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE + K+A++ T E ++ + Y + F LG IP P Sbjct: 144 LREIMTFKEAHTAHSTKEEAEEQVKEAISIYKKFFDTLG---IPYLISKRP--------- 191 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ FP FD I ++ + VHN Sbjct: 192 ---------------EWDKFPGAEYTMAFDTIFPDGRTMQ--------IATVHN------ 222 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 G +S F+ G Y YGI RV+A++I Sbjct: 223 -------------------LGQNFSKTFEIIFETPTGDKDYAYQTCYGISD-RVIASIIA 262 Query: 331 SSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 D KG+I P VAP +I +I + K + V + +++Y +L K V DD + Sbjct: 263 IHGDEKGLILPPIVAPIQIVIIPLIFKGKEDVVMEKAKELYEKL-KDKYRVHIDDRDIRP 321 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR---EDMSLEEVINYASHRFSNN 445 G +F ++ G PL++ +G K + + K+ + R T + ++ LEEVI + N Sbjct: 322 GRKFNDWEIKGVPLRIEIGPKDIENGKITLFRRDTMEKFQVDESELEEVIEKTLNNIMEN 381 >gi|332362439|gb|EGJ40239.1| threonine--tRNA ligase [Streptococcus sanguinis SK1056] Length = 654 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 261 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 320 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 321 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 380 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 381 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 428 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 429 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 480 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 481 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 529 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 530 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 584 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V D V ++ Sbjct: 585 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 623 >gi|21909901|ref|NP_664169.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28896400|ref|NP_802750.1| threonyl-tRNA synthetase [Streptococcus pyogenes SSI-1] gi|25453285|sp|Q8K8C0|SYT_STRP3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21904088|gb|AAM78972.1| putative threonyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28811651|dbj|BAC64583.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes SSI-1] Length = 647 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 90/415 (21%), Positives = 169/415 (40%), Gaps = 46/415 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 252 MISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWDHY 311 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M + D D + + P + ++++H++SYR LP ++ + R E Sbjct: 312 QEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPIRIAELGMMHRYEKSGALS 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 372 GLQRVREMTLNDGHIF-VTPEQIQEEFQRALQLIIDVYADFNLTDYRFR---------LS 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + D +T + D M EN +L+ + E A Y D Sbjct: 422 YR-----DPNDTHKYYDNDEM-----WENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLD 471 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 472 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 520 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 521 TMERFTAILIETYKGAFPTW---LAPHQVTVIPISNEAHI--DYAWEVAKTLRDRGVRAD 575 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E++ + + P Q+IVG K + + V ++ + S+EE + Sbjct: 576 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTESVEEFV 630 >gi|153854756|ref|ZP_01995990.1| hypothetical protein DORLON_01988 [Dorea longicatena DSM 13814] gi|149752663|gb|EDM62594.1| hypothetical protein DORLON_01988 [Dorea longicatena DSM 13814] Length = 479 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 86/405 (21%), Positives = 158/405 (39%), Gaps = 70/405 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG ++LP G + + A + TG + +P L L E+ + + E+ Sbjct: 37 KGCMNYLPNGYAIWELIQADLDRRFKETGVENVYLPVLIPESLLEKEADHVEGFAPEVAW 96 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + +R + + PT E + D++ +KSYR+LP + Q L++ RP Sbjct: 97 VTHGGMERLQERLCVRPTSETLFCDLWAKTVKSYRDLPKVWNQWNSVLRWEKTTRP---F 153 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +RSREFL ++ ++ T E ++ +M+ Y + +IP A G HE Sbjct: 154 LRSREFLWQEGHTLHATYEEAEERTIQMWEVYKDCYKET--MAIPFVA-----GRKAEHE 206 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 A+ D ++ +++ A +ATS Sbjct: 207 KFAGAE-------------------------DTYTIEALMHDGKALQSATS--------- 232 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 +FG + + + + H S+G + R + A+I Sbjct: 233 ------------------HFFGNGFPDAFGIKYVDKNNELHSAYETSWGW-STRSIGALI 273 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 D G++ P VAP + +I I H + D + L K G V DD + G Sbjct: 274 MVHGDDDGLVLPPHVAPVECRIIPIAQHKEGVLDRSYALLDELKKAGYRVKIDDSDKSTG 333 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +F+ ++LG P ++ +G K + ++V + R + +SL+E+ Sbjct: 334 WKFSEQEILGIPTRIEIGPKDIEKNQVVVVRRDNREKIVVSLDEI 378 >gi|332358692|gb|EGJ36515.1| threonine--tRNA ligase [Streptococcus sanguinis SK355] Length = 647 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V D V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 616 >gi|325694840|gb|EGD36745.1| threonine--tRNA ligase [Streptococcus sanguinis SK150] Length = 647 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMDVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V D V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 616 >gi|297250596|ref|ZP_06864620.2| threonine--tRNA ligase [Neisseria polysaccharea ATCC 43768] gi|296838509|gb|EFH22447.1| threonine--tRNA ligase [Neisseria polysaccharea ATCC 43768] Length = 648 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 84/398 (21%), Positives = 154/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +++Y Sbjct: 266 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEKRAGSD 441 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 + A+ G E C ++ + +P E + I +++ W V Sbjct: 442 DVWDKAEQGLREALTACGVEWGE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 499 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 500 PERLNAEYVTENNDRARPVML-------------------------HRAILGSL----ER 530 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE +H G +W +AP ++ ++NI + D C ++ A+L G V D Sbjct: 531 FIGILIE-NHAGSFPLW---LAPIQMVIMNITENQA---DYCREVAAKLQAAGFRVELDL 583 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 584 RNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 621 >gi|332367135|gb|EGJ44871.1| threonine--tRNA ligase [Streptococcus sanguinis SK1059] Length = 647 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V D V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 616 >gi|167749880|ref|ZP_02422007.1| hypothetical protein EUBSIR_00848 [Eubacterium siraeum DSM 15702] gi|167657192|gb|EDS01322.1| hypothetical protein EUBSIR_00848 [Eubacterium siraeum DSM 15702] Length = 639 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 105/436 (24%), Positives = 164/436 (37%), Gaps = 47/436 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L T I G +LP G + + R+ R G Sbjct: 232 YLNMIEEAKKRDHRKLGKELELFT--IMDEGPGFPFFLPKGMTLKNTLIDYWRQIHTRDG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + + LW SG +D Y KE + +D P + +++S +SY Sbjct: 290 YVEISTPIMLNRQLWETSGHWDHY-KENMYTTVIDDTEFAIKPMNCPGGILVYKSKPRSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E G+MR R F DA+ F +TP+ + + Sbjct: 349 RDLPIRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIF-MTPDQITDEIKGVVRLIDEV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + V T S++ D D + Sbjct: 408 YKLFGFK------------------YHVELSTQPEDSMGSQEDWDMATEGLRKALDSLGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SATF 302 + E A Y D H E DSL R + G I + LPM + Sbjct: 450 PYVVNEGDGAFYGPKIDFHLE---DSL-------GRTWQCGTI---QLDFQLPMRFELEY 496 Query: 303 KGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQV 360 GADG+ H + + G++ ++ G IW +AP ++ L+ I H++ Sbjct: 497 TGADGEKHRPIMIHRVVFGSIERFIGILTEHFAGAFPIW---LAPVQVELMPIADRHNEF 553 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 K+ A L K G V D E+IG + A L P +++G K V V I+ Sbjct: 554 ----TSKVAAELKKRGIRVEVDGRSEKIGFKIREAQLQKIPYMLVIGDKEVETENVSIRC 609 Query: 421 RLTGIREDMSLEEVIN 436 R G MS+ + + Sbjct: 610 RKRGDIGTMSVSDFCD 625 >gi|327461002|gb|EGF07335.1| threonine--tRNA ligase [Streptococcus sanguinis SK1057] Length = 647 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V D V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 616 >gi|325690794|gb|EGD32795.1| threonine--tRNA ligase [Streptococcus sanguinis SK115] Length = 647 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMDVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V D V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 616 >gi|229087132|ref|ZP_04219282.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228696200|gb|EEL49035.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 643 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 96/424 (22%), Positives = 175/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 227 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 286 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 287 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 346 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 347 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 405 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M S + Sbjct: 406 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQSMLKE 451 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 452 AMDEMGLEYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 503 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DGK H + G+ + R VA +IE KG +P +AP ++ +I + Sbjct: 504 ---TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVQVIPVS 556 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 557 P--QVHLDYAKKVQEELQRAGIRVEVDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 614 Query: 416 VEIK 419 V ++ Sbjct: 615 VNVR 618 >gi|327463110|gb|EGF09431.1| threonine--tRNA ligase [Streptococcus sanguinis SK1] Length = 647 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V D V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 616 >gi|288576250|ref|ZP_05978464.2| threonine--tRNA ligase [Neisseria mucosa ATCC 25996] gi|288565905|gb|EFC87465.1| threonine--tRNA ligase [Neisseria mucosa ATCC 25996] Length = 643 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 83/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 261 LQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 320 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 321 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 379 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 380 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEKRAGSD 436 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + +P E + I +++ W V E Sbjct: 437 DVWDKAEQGLRDALTACGVEWDELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 496 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 497 RLDAEYVTENNDRARPVML-------------------------HRAILGSLE----RFI 527 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G V D Sbjct: 528 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCCEVAAKLQAAGFRVELDLRN 580 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 581 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 616 >gi|304314752|ref|YP_003849899.1| prolyl-tRNA synthetase [Methanothermobacter marburgensis str. Marburg] gi|302588211|gb|ADL58586.1| prolyl-tRNA synthetase [Methanothermobacter marburgensis str. Marburg] Length = 465 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 96/430 (22%), Positives = 169/430 (39%), Gaps = 85/430 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S++F IL+E AEI + + KG++ W+P G + N I++ +R Sbjct: 5 SEWFHNILEE----AEIIDQRYPV---------KGMHVWMPHGFRIRKNTLNILKRILDR 51 Query: 64 TGAIEMSVPTLQSAD-LWVESGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIF 118 E+ P L D L E+ + E+ + + + + PT E VM +F Sbjct: 52 DHE-EVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQRKLALRPTSETVMYPMF 110 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++S+ +LP FYQI FR E +KH+ + Sbjct: 111 ALWVRSHTDLPMRFYQIVNTFRYE---------------------------TKHTRPLIR 143 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 V + F +H AD E QV + + + Sbjct: 144 VREITTFKE-------------------AHTIHATADEAEEQVERAIEIY--------RE 176 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL-PENKRVSARGIEVGHIFYFGTKYSLP 297 F D + + ++ + P+ FD+L P+ K +++G + G ++ Sbjct: 177 FFDSLGIPYLITK-RPPWDKFPGSDYTMAFDTLMPDGK-----TLQIGTVHNLGQTFART 230 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--- 354 F+ +G+ YV YG+ RV+A+VI D G+ P VA ++ ++ + Sbjct: 231 FEIKFENPEGEHEYVHQTCYGLSD-RVIASVIAVHGDESGLCLPPEVAAHQVVIVPVIFK 289 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 KA D+V +AC + L G V DD + G ++ ++ G PL+V +G + + ++ Sbjct: 290 KAADEVM-EACRDLRDSLGDAGFRVHLDDRDLRAGRKYYEWEMRGVPLRVEIGPRDLENN 348 Query: 415 KVEIKHRLTG 424 I R TG Sbjct: 349 SAVISRRDTG 358 >gi|325136057|gb|EGC58667.1| threonyl-tRNA synthetase [Neisseria meningitidis M0579] Length = 643 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 261 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 320 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 321 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 379 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 380 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEKRAGSD 436 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 437 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPE 496 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 497 RLNAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 527 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 528 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 580 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 581 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 616 >gi|125718378|ref|YP_001035511.1| threonyl-tRNA synthetase [Streptococcus sanguinis SK36] gi|166225508|sp|A3CP56|SYT_STRSV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|125498295|gb|ABN44961.1| Threonyl-tRNA synthetase, putative [Streptococcus sanguinis SK36] Length = 647 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDFFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V D V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 616 >gi|312131710|ref|YP_003999050.1| prolyl-tRNA synthetase [Leadbetterella byssophila DSM 17132] gi|311908256|gb|ADQ18697.1| prolyl-tRNA synthetase [Leadbetterella byssophila DSM 17132] Length = 490 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 73/348 (20%), Positives = 146/348 (41%), Gaps = 79/348 (22%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E V+ + +++ ++S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 115 EEELIVRPTSETVIWNSYKNWVQSHRDLPILINQWANVVRWEMRTRL-FLRTAEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E + N+M Y + Sbjct: 174 HTAHATREEAVAETNQMLEVYAKF------------------------------------ 197 Query: 221 VFCSKDFMDFPI----PSENTDF---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 ++++M P+ + N F DD + + ++++ A A TS Sbjct: 198 ---AEEWMAVPVVRGRKTANERFAGADDTLCIEALMQDGKALQAGTS------------- 241 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 + G ++ F+ GK +V S+G+ + R++ A+I + Sbjct: 242 --------------HFLGQNFAKAFDVKFQDKTGKQEFVWGTSWGV-STRLMGALIMAHS 286 Query: 334 DGKGIIWPDSVAPFKISLINI-KAHDQVCR--DACEKIYARLSKVGCDV-FWDDMGEQIG 389 D G++ P +AP ++ ++ I K +Q+ + E L G V F DD + G Sbjct: 287 DDLGLVLPPKLAPIQVVIVPIYKGEEQLNAIFERMEPTIKSLKVQGISVKFDDDDSARPG 346 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +FA +L G P+++ VG++ + + +VE+ R T +E +S++ + Y Sbjct: 347 WKFAEYELKGVPVRIAVGARDLENHQVEVARRDTLSKESVSMDGLDQY 394 >gi|309364909|emb|CAP23504.2| CBR-TARS-1 protein [Caenorhabditis briggsae AF16] Length = 729 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 89/420 (21%), Positives = 172/420 (40%), Gaps = 61/420 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 HQ S G W P G + + IR++ R G E+ P + + LW SG + Y Sbjct: 337 FFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNMYNKKLWETSGHWQHYS 396 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 ++M ++ ++ + P + +F +Y LPF F + R+E+ G+ Sbjct: 397 EDMFKIEVEKEEFGL-KPMNCPGHCLMFGHMPHTYNELPFRFADFGVLHRNEMSGALTGL 455 Query: 150 MRSREFLMKDAYSF---DLTPEGSKHSYNKMFVSYLRIF---HRLGLKSIPMRAESGPIG 203 R R F DA+ F D E K + + +Y ++F +L L + P G +G Sbjct: 456 TRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEKVFGFTFKLNLSTRP----EGFLG 511 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYA 257 I D E D +LN+ +W A Y Sbjct: 512 K------IETWDQAEA--------------------DLTEALNATGRKWALNPGDGAFYG 545 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D+L N + + ++ F ++ L + F K V + Sbjct: 546 PKIDI---TIQDALKRNFQCATIQLD----FQLPNQFDL---SYFDEKGEKQRPVMIHRA 595 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 +G++ + A++ S+ GK WP ++P + +I + H+ V RD + + ++ G Sbjct: 596 VLGSVERMTAILTESYGGK---WPFWLSPRQCKIITV--HESV-RDYAKDVKKQIFDAGF 649 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +D+ G+ + Q + L F +++G+K + V ++ R +R ++ +E++++ Sbjct: 650 EVEYDEFCGDTMNKQVRNSQLAQFNFILVLGAKEKENGTVNVRTRDNAVRGEVPIEKLLS 709 >gi|328946743|gb|EGG40881.1| threonine--tRNA ligase [Streptococcus sanguinis SK1087] Length = 647 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V D V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 616 >gi|291299687|ref|YP_003510965.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] gi|290568907|gb|ADD41872.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] Length = 468 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 88/397 (22%), Positives = 161/397 (40%), Gaps = 67/397 (16%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDK 102 P G + + A + + TGA S P L + L E+ + + E + K Sbjct: 39 PTGFALWERMVAEMDDRIKETGAENASFPLLIPQSYLSKEAQHVEGFAPECWTVTHAGGK 98 Query: 103 AM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMK 158 + + PT E V+ + +KSYR+LP Q R E+R R +RS EFL + Sbjct: 99 ELEEPVVVRPTSETVIGESMSRWVKSYRDLPLLLNQWCNVMRYEMRTRL-FLRSSEFLWQ 157 Query: 159 DAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 + ++ T E + +YN+ RI H Sbjct: 158 EGHTAHATFEDAA-AYNR------RILH-------------------------------- 178 Query: 219 TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 +V+ +DFM +++++L TA ++ + + K + Sbjct: 179 -EVY--QDFM-----------ENVVALPVFTGLKTAAERFAGAINTFTCEAMMRDGKALQ 224 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A G G ++ + G+DGK H+ S+G+ + R+V A+I D G+ Sbjct: 225 A-----GTAHELGQNFAKAFDIQYLGSDGKQHHAWTTSWGV-STRMVGALIMGHGDDSGL 278 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 P +AP + ++ +K + V +A K +A L G +D + G + A+L Sbjct: 279 RVPPRLAPVQAYVMTVKDGEGVS-EAAAKTHAALRAAGVRSKLNDRSDVAFGRRAVDAEL 337 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G+P+++ +G + V++ K + R+ G + +SL+ V Sbjct: 338 KGYPVRLEIGPRDVAEGKAMLVRRIAGTKTQVSLDGV 374 >gi|126657277|ref|ZP_01728443.1| threonyl-tRNA synthetase [Cyanothece sp. CCY0110] gi|126621548|gb|EAZ92259.1| threonyl-tRNA synthetase [Cyanothece sp. CCY0110] Length = 607 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 86/424 (20%), Positives = 168/424 (39%), Gaps = 56/424 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +++EQ + G + + P + DL+ SG + +Y ++M + Sbjct: 221 GLPLWTPKGTIIRSTLEDFLKQEQLKRGYLPVVTPHIGRVDLFKISGHWQNYKEDMFPMM 280 Query: 98 DRNDKA------MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 N++A + P + I++S ++SYR+LP + +R E G+ Sbjct: 281 AENEEAKTSEMGFVLKPMNCPFHIQIYKSELRSYRDLPMRLAEFGTVYRYEQSGELGGLT 340 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL---S 207 R R F + D++ F +TP+ + + L +F L LK+ R D S Sbjct: 341 RVRGFTVDDSHLF-VTPDQLDDEFLNVVDLILSVFRSLQLKNFKARLSFRDPNSDKYIGS 399 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFD---DIISLNSIVEQWTAPYAATSDVHN 264 +E A+ + + D F E + D I +++ +W Sbjct: 400 NEAWNKAENAIRRAVQTLDMNYFEAEGEAAFYGPKLDFIFQDALEREW------------ 447 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGA 321 ++G + Y+LP + G +G H V + G+ Sbjct: 448 ------------------QLGTV---QVDYNLPERFELEYVGEEGNRHRPVMIHRAPFGS 486 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + + ++ + G +W +AP ++ L+ + V D + I ++ +G Sbjct: 487 LERLIGILIEEYAGDFPLW---LAPIQVRLLPV---SDVQLDYVKDIANKMLSLGIRAEA 540 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 D GE++G + P+ IVG+K V + + I+ R +G M+++EVI Sbjct: 541 DTSGERLGKMIRNGEKQKIPVMAIVGAKEVEANALSIRTRASGELGTMAVDEVIEKLRDT 600 Query: 442 FSNN 445 +N+ Sbjct: 601 ITNH 604 >gi|311693962|gb|ADP96835.1| threonyl-tRNA synthetase [marine bacterium HP15] Length = 641 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 96/440 (21%), Positives = 176/440 (40%), Gaps = 79/440 (17%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ + G+ H + + G+ W P G + +R +Q G E+ P Sbjct: 237 EAEKRDHRKVGKKLGLFHMQEEAPGMVFWHPDGWSLYQEIEQYMRRKQQEHGYKEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + S +LW +SG +D + +M ++++D A+ P + +F +KSY++LP Sbjct: 297 VVSRNLWEKSGHWDKFKDDMFTTESEKHDYAI--KPMNCPCHVQVFNQGLKSYKDLPLRL 354 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + R+E G+MR R F DA+ F + + + S++ + H Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFTQDDAHIF-----CEEDAIQQEVSSFIEMLHE---- 405 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + D G T++ + P + D++ Sbjct: 406 --------------------IYTDFGFTEIL----YKLSTRPEKRVGSDEV--------- 432 Query: 252 WTAPYAATSDVHNEKLFDS--LPENKRVSARGIE------VGHIFYFGT---KYSLP--M 298 W AA + N + D LP IE +G ++ GT +S+P + Sbjct: 433 WDKAEAALEEALNREGVDWELLPGEGAFYGPKIEFSLKDCIGRVWQCGTIQVDFSMPGRL 492 Query: 299 SATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 A + + + H +GS+ R + +IE ++G W +AP +++++ Sbjct: 493 GAQYVADNSERKTPVMLHRAVLGSF----ERFIGILIE-EYEGAFPTW---LAPTQVAIL 544 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 NI + RD C+ + + +G V D E+IG + L P V+VG K V Sbjct: 545 NITDNQ---RDYCQNLAKKWDSLGYRVNADLRNEKIGFKIREHTLNKVPYLVVVGDKEVE 601 Query: 413 DSKVEIKHRLTGIREDMSLE 432 ++ V ++ R +SLE Sbjct: 602 NNAVAVRTRKGEDLGTLSLE 621 >gi|332358962|gb|EGJ36783.1| threonine--tRNA ligase [Streptococcus sanguinis SK49] Length = 647 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V D V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 616 >gi|161869662|ref|YP_001598829.1| threonyl-tRNA synthetase [Neisseria meningitidis 053442] gi|189083614|sp|A9M375|SYT_NEIM0 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161595215|gb|ABX72875.1| threonyl-tRNA synthetase [Neisseria meningitidis 053442] Length = 637 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 84/398 (21%), Positives = 153/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEKRAGSD 430 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 + A+ G E C ++ + +P E + I +++ W V Sbjct: 431 DVWDKAEQGLREALTACGVEWGE--LPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVL 488 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 489 PERLGAEYVTENNDRARPVML-------------------------HRAILGSL----ER 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 520 FIGILIE-NHAGSFPLW---LAPVQLVIMNITENQA---DYCREVAAKLQAAGFRAELDL 572 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 573 RNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|289167501|ref|YP_003445770.1| Threonyl-tRNA synthetase, threonine-tRNA ligase [Streptococcus mitis B6] gi|288907068|emb|CBJ21902.1| Threonyl-tRNA synthetase, threonine-tRNA ligase [Streptococcus mitis B6] Length = 647 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P + S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++ H+ SYR LP +I + R E Sbjct: 314 REDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|121634517|ref|YP_974762.1| threonyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|120866223|emb|CAM09963.1| putative threonyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|325131827|gb|EGC54527.1| threonyl-tRNA synthetase [Neisseria meningitidis M6190] Length = 648 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 83/396 (20%), Positives = 149/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 266 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVAVKLSLRPEQRAGSD 441 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 E A+ G + +P E + I +++ W V E Sbjct: 442 EVWDKAEQGLRDALTACGVEWEELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 501 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 502 RLDAEYVTENNDRARPVML-------------------------HRAILGSLE----RFI 532 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 533 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 585 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 586 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 621 >gi|320160257|ref|YP_004173481.1| putative prolyl-tRNA synthetase [Anaerolinea thermophila UNI-1] gi|319994110|dbj|BAJ62881.1| putative prolyl-tRNA synthetase [Anaerolinea thermophila UNI-1] Length = 545 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 76/165 (46%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 RG+ V F + + + +G+ V M + + R A + E HD G+I Sbjct: 379 RGLTVARSIRFSSDFIRDRGLNYFDENGQSRPVWMEIHTLNLTRTFACLAELRHDNYGLI 438 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 P +PF++ L+ + + A ++ +L ++ DV DD E G +F ADL+G Sbjct: 439 LPPQASPFEVHLVVLPGKENGVASALPEVLKQLEQMNLDVLVDDRSESPGVKFNDADLIG 498 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 P+++ + + + +E++ R R+ + LE++ ++ S Sbjct: 499 VPVRLTLSERSLQQGGIEVRKRWESERQTIPLEDLSDWIRKSLSQ 543 >gi|325127774|gb|EGC50682.1| threonyl-tRNA synthetase [Neisseria meningitidis N1568] Length = 637 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEKRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 431 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLNAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQLVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|160890380|ref|ZP_02071383.1| hypothetical protein BACUNI_02821 [Bacteroides uniformis ATCC 8492] gi|270296935|ref|ZP_06203134.1| prolyl-tRNA synthetase [Bacteroides sp. D20] gi|317479089|ref|ZP_07938230.1| prolyl-tRNA synthetase [Bacteroides sp. 4_1_36] gi|156860112|gb|EDO53543.1| hypothetical protein BACUNI_02821 [Bacteroides uniformis ATCC 8492] gi|270272922|gb|EFA18785.1| prolyl-tRNA synthetase [Bacteroides sp. D20] gi|316904745|gb|EFV26558.1| prolyl-tRNA synthetase [Bacteroides sp. 4_1_36] Length = 497 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 70/345 (20%), Positives = 143/345 (41%), Gaps = 65/345 (18%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWINSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 ++ + T ++ + V L ++ K + + G Sbjct: 173 WQEGH----TAHATREEAEEEAVKMLNVYAEFAEKYMAVPVVKG---------------- 212 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + S N F ++ +I E Sbjct: 213 ---------------VKSANERFAGALNTYTI------------------------EAMM 233 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D Sbjct: 234 QDGKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGV-STRLMGALIMTHSDDN 292 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQF 392 G++ P +AP ++ ++ I + ++ EK I A+L +G V +D+ ++ G +F Sbjct: 293 GLVLPPHLAPIQVVIVPIYKNAEMLAKIDEKVAGIVAKLKSMGISVKYDNADNKRPGFKF 352 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 A ++ G P+++++G + + ++ +EI R T +E S E + Y Sbjct: 353 ADYEVKGVPVRLVMGGRDLENNTMEIMRRDTLEKETRSCEGIEEY 397 >gi|209558991|ref|YP_002285463.1| threonyl-tRNA synthetase [Streptococcus pyogenes NZ131] gi|238065119|sp|B5XKA6|SYT_STRPZ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|209540192|gb|ACI60768.1| Threonyl-tRNA synthetase [Streptococcus pyogenes NZ131] Length = 647 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 90/415 (21%), Positives = 169/415 (40%), Gaps = 46/415 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG +D Y Sbjct: 252 MISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWDHY 311 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M + D D + + P + ++++H++SYR LP ++ + R E Sbjct: 312 QEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPIRIAELGMMHRYEKSGALS 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 372 GLQRVREMTLNDGHIF-VTPEQIQEEFQRALQLIIDVYADFNLTDYRFR---------LS 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + D +T + D M EN +L+ + E A Y D Sbjct: 422 YR-----DPNDTHKYYDNDEM-----WENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLD 471 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 472 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 520 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 521 TMERFTAILIETYKGAFPTW---LAPHQVTVIPISNEAHI--DYAWEVAKILRDRGVRAD 575 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E++ + + P Q+IVG K + D V ++ + S+E+ + Sbjct: 576 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEDFV 630 >gi|88607718|ref|YP_505783.1| threonyl-tRNA synthetase [Anaplasma phagocytophilum HZ] gi|88598781|gb|ABD44251.1| threonyl-tRNA synthetase [Anaplasma phagocytophilum HZ] Length = 615 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 86/421 (20%), Positives = 166/421 (39%), Gaps = 51/421 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G W G + +R++ G E+ P + LW +SG ++ + + Sbjct: 232 IQNEALGQVFWHDKGWTLYRTIEEYLRKKLRENGYTEIKTPIMLDRKLWEKSGHWEKFRE 291 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR-PRFGVM 150 M ++D+N + + P + IF+S +SY++LP + + R+E +G+M Sbjct: 292 NMFIVSDQNSQELAIKPMNCPCHVQIFKSKTRSYKDLPIRMAEFGMCHRNEPSGSLYGLM 351 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + K + + +++ G K+I ++ P IG D Sbjct: 352 RVRGFTQDDAHIF-CTHDQIRDEVRKFYKLLVEVYNDFGFKNIDVKLSDRPEERIGSD-- 408 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E + MD DD +I + A Y + L Sbjct: 409 ----------EMWDMAERSLMD--------SMDDEGVKYTINKGDGAFYGPKLEF---TL 447 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D+L N + ++ + LP + A + G+DG H+ M I G + Sbjct: 448 KDALGRNWQCGTIQLD----------FVLPSRLGAYYVGSDGNKHHPVMIHRAILGTLER 497 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ S+ G W +AP ++ ++ + ++ + + + + V + Sbjct: 498 FIGILIESYAGNLPAW---LAPVQLEILTVNSN---ALEYATTLANKAREHNIRVELNSG 551 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT----GIREDMSLEEVINYASH 440 E IG + + P+ +VGS +D V ++H T + D +L+ ++ Y S Sbjct: 552 EESIGQKIRKSIFNKIPVLWVVGSAETADCTVSVRHYGTSNACSMEADKALKTLVTYVSI 611 Query: 441 R 441 R Sbjct: 612 R 612 >gi|291557532|emb|CBL34649.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium siraeum V10Sc8a] Length = 639 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 105/436 (24%), Positives = 164/436 (37%), Gaps = 47/436 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L T I G +LP G + + R+ R G Sbjct: 232 YLNMIEEAKKRDHRKLGKELELFT--IMDEGPGFPFFLPKGMTLKNTLIDYWRQIHTRDG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + + LW SG +D Y KE + +D P + +++S +SY Sbjct: 290 YVEISTPIMLNRQLWETSGHWDHY-KENMYTTVIDDTEFAIKPMNCPGGILVYKSKPRSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E G+MR R F DA+ F +TP+ + + Sbjct: 349 RDLPIRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIF-MTPDQITDEIKGVVRLIDEV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + V T S++ D D + Sbjct: 408 YKLFGFK------------------YHVELSTQPEDSMGSQEDWDMATEGLRKALDSLGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SATF 302 + E A Y D H E DSL R + G I + LPM + Sbjct: 450 PYVVNEGDGAFYGPKIDFHLE---DSL-------GRTWQCGTI---QLDFQLPMRFELEY 496 Query: 303 KGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQV 360 GADG+ H + + G++ ++ G IW +AP ++ L+ I H++ Sbjct: 497 TGADGEKHRPIMIHRVVFGSIERFIGILTEHFAGAFPIW---LAPVQVELMPIADRHNEF 553 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 K+ A L K G V D E+IG + A L P +++G K V V I+ Sbjct: 554 ----TSKVAAELKKRGIRVEVDGRSEKIGFKIREAQLQKIPYMLVIGDKEVETENVSIRC 609 Query: 421 RLTGIREDMSLEEVIN 436 R G MS+ + + Sbjct: 610 RKRGDIGTMSVADFCD 625 >gi|240016048|ref|ZP_04722588.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA6140] Length = 648 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 266 LQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 441 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 442 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 501 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R V Sbjct: 502 RLDAEYVTENNDRARPVML-------------------------HRAILGSLE----RFV 532 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE ++ G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 533 GILIE-NYAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 585 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 586 EKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 621 >gi|325137877|gb|EGC60452.1| threonyl-tRNA synthetase [Neisseria meningitidis ES14902] Length = 637 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 83/396 (20%), Positives = 149/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVAVKLSLRPEQRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 E A+ G + +P E + I +++ W V E Sbjct: 431 EVWDKAEQGLRDALTACGVEWEELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|308388909|gb|ADO31229.1| putative threonyl-tRNA synthetase [Neisseria meningitidis alpha710] gi|325202484|gb|ADY97938.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240149] gi|325207764|gb|ADZ03216.1| threonyl-tRNA synthetase [Neisseria meningitidis NZ-05/33] Length = 637 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEKRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 431 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLNAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|198275235|ref|ZP_03207766.1| hypothetical protein BACPLE_01394 [Bacteroides plebeius DSM 17135] gi|198271818|gb|EDY96088.1| hypothetical protein BACPLE_01394 [Bacteroides plebeius DSM 17135] Length = 646 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 98/429 (22%), Positives = 160/429 (37%), Gaps = 67/429 (15%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIGNKLLYVTSGHYAKYGKDAFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + I+++ +SYR+LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYRDLPLRIAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K + ++ +F +GL++ + I Sbjct: 380 RSFTQDDAHIF-CRPDQVKDEFLRVMDIISIVFTSMGLENFEAQ--------------IS 424 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 L D + + D E W A + EK + Sbjct: 425 LRDKENREKYIGSD-----------------------ENWEKAEQAIVEACEEKGLKAKV 461 Query: 273 ENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYG 318 E + G + +G + GT Y+LP + G+D + H V + Sbjct: 462 EYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAP 521 Query: 319 IGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 G+M R VA +IE + GK +W PD VA IS + D +K+ L K Sbjct: 522 FGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNDYADKVRMELKKY 572 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E+IG + ++ P +IVG K + +V ++ + G + M +EE Sbjct: 573 DVRALVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVRKQGEGDKGTMKIEEFA 632 Query: 436 NYASHRFSN 444 + N Sbjct: 633 KNIAEEVHN 641 >gi|76155685|gb|AAX26970.2| SJCHGC07933 protein [Schistosoma japonicum] Length = 118 Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 35/89 (39%), Positives = 50/89 (56%) Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + GA + +PTL ++W +SGR+ + +L DR PTHEE +T S Sbjct: 14 KLGAQRVQLPTLGPRNMWEKSGRWSEMHSSLFKLRDRLSHDYCLQPTHEECITSFVTSLK 73 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 SY++LP YQI KFRDE RP+ G++R Sbjct: 74 LSYKSLPVFLYQITSKFRDEPRPKNGLIR 102 >gi|325133766|gb|EGC56422.1| threonyl-tRNA synthetase [Neisseria meningitidis M13399] gi|325144077|gb|EGC66385.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240013] gi|325206438|gb|ADZ01891.1| threonyl-tRNA synthetase [Neisseria meningitidis M04-240196] Length = 637 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEKRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 431 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLNAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|190571398|ref|YP_001975756.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018797|ref|ZP_03334605.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238055114|sp|B3CMJ4|SYT_WOLPP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|190357670|emb|CAQ55114.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995748|gb|EEB56388.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 633 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 90/407 (22%), Positives = 157/407 (38%), Gaps = 45/407 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G W G + + + IR++ G E+ P L S +LW +SG +D + + Sbjct: 253 IQEEAVGQIFWHEQGYTLYNVLESYIRKKLMNNGYFEVKTPILVSKELWEKSGHWDKFRE 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + K + P + IF SHI+SYR+LP + R+E G+M Sbjct: 313 NMFIIDESESKKLAIKPMNCPCHVQIFNSHIRSYRDLPIRMAEFGTCHRNESSGSLHGLM 372 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGGDLSHE 209 R R F DA+ F + E +S F L+ ++ LG I ++ P + E Sbjct: 373 RVRGFTQDDAHIFCM--EKQVNSETVKFCDLLKEVYSELGFNEISVKFSDRPDTRSGNDE 430 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFD---DIISLNSIVEQWTAPYAATSDVHNEK 266 A+ + P E + + I ++I W + Sbjct: 431 VWDRAERALLEAVKEAGLSYELNPGEGAFYGPKLEFILKDAIGRNWQCGTLQVDFI---- 486 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVV 325 LPE R+ A FY GT DG K H V + +G Sbjct: 487 ----LPE--RLGA--------FYIGT-------------DGHKHHPVMLHRAILGTFERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ ++ GK +W +AP +++++ I +I L + G + D Sbjct: 520 IGILIENYAGKFPVW---LAPTQLAILTITNESD---GYATEISNVLKEQGVRIKTDLTN 573 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 E+I + + P+ I+G V++ V +++ + +E SLE Sbjct: 574 EKISYKIRLHSSSKVPILWIIGKNEVTNKTVSVRNLGSEKQESFSLE 620 >gi|156097506|ref|XP_001614786.1| prolyl-t-RNA synthase [Plasmodium vivax SaI-1] gi|148803660|gb|EDL45059.1| prolyl-t-RNA synthase, putative [Plasmodium vivax] Length = 476 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 27/237 (11%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 F I + + + + +L+ R I + G+Y+ LPLG K+++ + + + R + Sbjct: 7 FNKICNDTDKQSGDKASELLQRANYI-RDVNGLYNLLPLGYKSIEKIISFLNTHLKRVNS 65 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRL-------ADRN-------------DKAMIY 106 + + LQ+ W S R Y E L + D N D +I Sbjct: 66 HCLFMSILQAKKWWNISDRSKLYSDEFLHVYKQKQQKGDSNKGTEAVMGKKKMEDDGLIL 125 Query: 107 GPTHEE----VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 PT EE ++ ++ +I + ++LP +Q KFR+E R + +S+EFLMKD YS Sbjct: 126 SPTCEEQAISLINQVYNENIPA-KSLPLLIHQFNYKFRNEKRLEKTLFKSKEFLMKDGYS 184 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGE 218 F +Y Y ++F L L + + + + SHEF VL G+ Sbjct: 185 FHSNDICLSETYEAYKECYEKVFSHLKLPFKVTKKRKMDKMNALESHEFQVLCRDGK 241 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 60/170 (35%), Gaps = 45/170 (26%) Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 E HIF G YS + + + + MGSYGIG R++ +++S +DG+GI P Sbjct: 244 EAAHIFKLGDYYSRKLGIKYLNKRNEKSNIFMGSYGIGIYRLLYFLVDSFYDGEGIRLPA 303 Query: 343 SVAPFKISLINIKAHDQVCRDACEKI---------------------------------- 368 VAPF + LI + KI Sbjct: 304 QVAPFSVYLIQTNQRSKYSAAKVAKIGKLAQANEAVQAVEAVQAVNSPNVPSAPTPPLNS 363 Query: 369 -----------YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 Y D+++DD + + DL+G P ++I+ Sbjct: 364 NDVEYVLTLWLYNSFKNSDVDIYYDDTDLHLSRKLKNCDLIGVPNRIIIN 413 >gi|284799642|ref|ZP_05984463.2| threonine--tRNA ligase [Neisseria subflava NJ9703] gi|284797591|gb|EFC52938.1| threonine--tRNA ligase [Neisseria subflava NJ9703] Length = 643 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 83/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +++Y Sbjct: 261 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKD 320 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 321 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 379 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 380 RVRGFVQDDAHIFCAEDQIVDEARAFNELLV---RIYKQFGFHDVAVKLSLRPEQRAGSD 436 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 E A+ G + +P E + I +++ W V E Sbjct: 437 EVWDKAEQGLRDALTACGVEWEELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 496 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 497 RLNAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 527 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G V D Sbjct: 528 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRVELDLRN 580 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 581 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 616 >gi|86134203|ref|ZP_01052785.1| Threonyl-tRNA synthetase [Polaribacter sp. MED152] gi|85821066|gb|EAQ42213.1| Threonyl-tRNA synthetase [Polaribacter sp. MED152] Length = 647 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 89/413 (21%), Positives = 151/413 (36%), Gaps = 61/413 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ WLP G + + ++ Q + G + P + +L+V SG Y+ YG++ + Sbjct: 262 GLPLWLPKGAALRERLQNFLKAAQKKAGYEMVMTPHIGQKELYVTSGHYEKYGEDSFQAI 321 Query: 97 -ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + D+ + P + +++ SY++LP F + +R E G+ R R Sbjct: 322 KTPKMDEEFLLKPMNCPHHCEVYNFKPYSYKDLPKRFAEFGTVYRYEQSGELHGLTRVRG 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F TPE + ++ L +F LG Sbjct: 382 FTQDDAHIF-CTPEQLDQEFKEVIDLVLYVFGSLG------------------------- 415 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 F DF D +++ VE W A +K D + E Sbjct: 416 ------------FEDFTAQVSIRDMENLDKYIGDVETWEIAENAIISAAKDKGLDYVIEE 463 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 + G + +G + GT Y+LP T+ G+D + H V + G Sbjct: 464 GEAAFYGPKLDFMVKDALGRSWQLGTIQVDYNLPKRFDLTYTGSDNQSHRPVMIHRAPFG 523 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 +M AV+ G +W + P ++ ++ I Q EK+ L Sbjct: 524 SMERFIAVLLEHTGGNFPLW---LTPEQVIILPISDKYQ---KYTEKVLESLENSEIRAL 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 DD E+ G + A++ P VIVG K D V ++ G ++EE Sbjct: 578 VDDRSEKTGRKIRDAEVSKIPFMVIVGEKEEQDGTVSVRKHGEGDIGTFTIEE 630 >gi|288553677|ref|YP_003425612.1| threonyl-tRNA synthetase [Bacillus pseudofirmus OF4] gi|288544837|gb|ADC48720.1| threonyl-tRNA synthetase [Bacillus pseudofirmus OF4] Length = 643 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 85/387 (21%), Positives = 166/387 (42%), Gaps = 36/387 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ R G + P L S++L+ SG +D Y +M + Sbjct: 264 QGLPLWLPKGATVRRVIERYIVDKEERLGYQHVYTPILGSSELYKTSGHWDHYKDDMFPV 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +R+++ + P + +++ ++SYR LP ++ + R E+ G+ R R Sbjct: 324 MERDNEEFVLRPMNCPHHMMVYKQDMRSYRQLPLRIAELGMMHRYEMSGAVSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F P+ K + ++ ++ GL R LS+ D Sbjct: 384 TLNDAHIF-CRPDQIKEEFLRVVYLIQEVYKDFGLDDYKFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M S + D + ++ E A Y DV ++ +L ++ Sbjct: 429 PEDKEKYFDDDAMWEKAQSMLKEAMDELDVDYYEAEGEAAFYGPKLDV---QVRTALGKD 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DG+ H + G+ + R VA ++E Sbjct: 486 ETLSTVQLD----FLLPERFDL----TYVGEDGQQHRPVVVHRGVVSTMERFVAFLLEEY 537 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ +I + V D +K+ L + G V D+ E+IG + Sbjct: 538 ---KG-AFPTWLAPVQVQVIPVSP--DVHLDYAKKVQDALQQAGARVEIDERNEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIK 419 A + P +++G K + V I+ Sbjct: 592 REAQMQKIPYMLVLGDKEMESGAVNIR 618 >gi|82701621|ref|YP_411187.1| threonyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] gi|123727233|sp|Q2YBS6|SYT_NITMU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|82409686|gb|ABB73795.1| Ser-tRNA(Thr) hydrolase [Nitrosospira multiformis ATCC 25196] Length = 638 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 92/431 (21%), Positives = 163/431 (37%), Gaps = 53/431 (12%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL + G+ H + + G+ W P G V +R+ G +E+ P+ Sbjct: 237 EAEKRDHRKLGKQLGLFHLQEEAPGMVFWHPKGWVVWQQVEQYMRDIFRNNGYLEIRTPS 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW SG ++++ + M + D+ P + +F+ +KSYR+LP Sbjct: 297 VLDKGLWERSGHWENFRENMF-VTQAEDREFSVKPMNCPGHVQVFKQGLKSYRDLPLRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLK 191 + R+E G+MR R F DA+ F E F+ L ++++ G Sbjct: 356 EFGSCHRNEPSGALHGIMRVRAFTQDDAHIF--CTESQVQDEAVQFIDLLQKVYNDFGFN 413 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 I ++ + P S E A+ K+ + P E + I + Sbjct: 414 DILVKLSTRPAKRVGSEEQWDKAEEALRSALNHKNLIWELQPGEGAFYGPKIEFS----- 468 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGAD 306 L DS +G I+ GT +S+P + A F D Sbjct: 469 ---------------LKDS-------------IGRIWQCGTLQLDFSMPERLGAEFVAED 500 Query: 307 GKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 M I G++ ++ +H G +W ++P ++NI D Sbjct: 501 NSRQIPVMLHRAILGSLERFIGILIENHAGALPLW---LSPDHAVVLNISEGQA---DYA 554 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 ++ L + G + D E+I + L P Q+IVG K V+ +V ++ R Sbjct: 555 REVTEELRRAGIRAYADLRNEKITYKIREHSLQKLPYQIIVGDKEVAAQRVAVRTRSGSD 614 Query: 426 REDMSLEEVIN 436 M+L +++ Sbjct: 615 LGQMTLPALVD 625 >gi|268532388|ref|XP_002631322.1| C. briggsae CBR-TRS-1 protein [Caenorhabditis briggsae] Length = 704 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 89/420 (21%), Positives = 172/420 (40%), Gaps = 61/420 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 HQ S G W P G + + IR++ R G E+ P + + LW SG + Y Sbjct: 313 FFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNMYNKKLWETSGHWQHYS 372 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 ++M ++ ++ + P + +F +Y LPF F + R+E+ G+ Sbjct: 373 EDMFKIEVEKEEFGL-KPMNCPGHCLMFGHMPHTYNELPFRFADFGVLHRNEMSGALTGL 431 Query: 150 MRSREFLMKDAYSF---DLTPEGSKHSYNKMFVSYLRIF---HRLGLKSIPMRAESGPIG 203 R R F DA+ F D E K + + +Y ++F +L L + P G +G Sbjct: 432 TRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEKVFGFTFKLNLSTRP----EGFLG 487 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYA 257 I D E D +LN+ +W A Y Sbjct: 488 K------IETWDQAEA--------------------DLTEALNATGRKWALNPGDGAFYG 521 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D+L N + + ++ F ++ L + F K V + Sbjct: 522 PKIDI---TIQDALKRNFQCATIQLD----FQLPNQFDL---SYFDEKGEKQRPVMIHRA 571 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 +G++ + A++ S+ GK WP ++P + +I + H+ V RD + + ++ G Sbjct: 572 VLGSVERMTAILTESYGGK---WPFWLSPRQCKIITV--HESV-RDYAKDVKKQIFDAGF 625 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +D+ G+ + Q + L F +++G+K + V ++ R +R ++ +E++++ Sbjct: 626 EVEYDEFCGDTMNKQVRNSQLAQFNFILVLGAKEKENGTVNVRTRDNAVRGEVPIEKLLS 685 >gi|319637847|ref|ZP_07992613.1| threonyl-tRNA synthetase [Neisseria mucosa C102] gi|317401002|gb|EFV81657.1| threonyl-tRNA synthetase [Neisseria mucosa C102] Length = 637 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 83/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +++Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVDEARAFNELLV---RIYKQFGFHDVAVKLSLRPEQRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 E A+ G + +P E + I +++ W V E Sbjct: 431 EVWDKAEQGLRDALTACGVEWEELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLNAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G V D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRVELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|316983701|gb|EFV62682.1| threonyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 648 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 83/398 (20%), Positives = 153/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 266 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ + RI+ + G + ++ P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVSEARAFNELLI---RIYKQFGFHDVSVKLSLRPEKRAGSD 441 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 + A+ G E C ++ + +P E + I +++ W V Sbjct: 442 DVWDKAEQGLREALTACGVEWGE--LPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVL 499 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 500 PERLNAEYVTENNDRARPVML-------------------------HRAILGSL----ER 530 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 531 FIGILIE-NHAGSFPLW---LAPVQLVIMNITENQA---DYCREVAAKLQAAGFRAELDL 583 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 584 RNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 621 >gi|154499081|ref|ZP_02037459.1| hypothetical protein BACCAP_03073 [Bacteroides capillosus ATCC 29799] gi|150271921|gb|EDM99147.1| hypothetical protein BACCAP_03073 [Bacteroides capillosus ATCC 29799] Length = 497 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 80/155 (51%), Gaps = 1/155 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G YFG ++ TF G D + H+ S+G+ + R++ +I + D G++ Sbjct: 244 KALQAGTSHYFGDGFAKAFDITFTGKDNQLHHPHQTSWGV-STRMIGGLIMTHGDNNGLV 302 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 P +AP ++ +I + H +A + + RL K G V DD + G +FA ++ G Sbjct: 303 LPPRIAPIQVIIIPVAQHKPGVIEANQAVMDRLIKAGFRVKMDDSDQSAGWKFAEYEMKG 362 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 PL++ +G K + ++ + R +G + +SL+ + Sbjct: 363 VPLRLELGPKDIEKNQCVLARRDSGEKSFVSLDGI 397 >gi|322372498|ref|ZP_08047034.1| threonine--tRNA ligase [Streptococcus sp. C150] gi|321277540|gb|EFX54609.1| threonine--tRNA ligase [Streptococcus sp. C150] Length = 648 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 159/399 (39%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P + S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++ H+ SYR LP +I + R E Sbjct: 314 REDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D ++F + PE + + K+ + ++ L R Sbjct: 374 GLQRVREMSLNDGHTF-VAPEQIEDEFKKILQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTD------FDDIISLNSIVEQWTAPYAATSD 261 + D + + D M EN DD+ E A Y D Sbjct: 422 ---LSYRDPADKHKYFDNDEM-----WENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----HYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D K+ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWKVAKKLRDRGVRAE 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDGTVNVR 616 >gi|218767842|ref|YP_002342354.1| putative threonyl-tRNA synthetase [Neisseria meningitidis Z2491] gi|22654142|sp|Q9JVA3|SYT_NEIMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|121051850|emb|CAM08156.1| putative threonyl-tRNA synthetase [Neisseria meningitidis Z2491] Length = 637 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 151/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +++Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEQRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 431 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G V D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQLVIMNITENQA---DYCREVAAKLQAAGFRVELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|15676618|ref|NP_273762.1| threonyl-tRNA synthetase [Neisseria meningitidis MC58] gi|22654143|sp|Q9K095|SYT_NEIMB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|7225946|gb|AAF41133.1| threonyl-tRNA synthetase [Neisseria meningitidis MC58] gi|325140125|gb|EGC62654.1| threonyl-tRNA synthetase [Neisseria meningitidis CU385] gi|325200596|gb|ADY96051.1| threonyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 637 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 81/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ + RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLI---RIYKQFGFHDVSVKLSLRPEKRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 431 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLNAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQLVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|298369384|ref|ZP_06980702.1| threonine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] gi|298283387|gb|EFI24874.1| threonine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] Length = 648 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 81/398 (20%), Positives = 153/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E + G E+ P + W +SG +D+Y Sbjct: 266 LQDEAPGMVFWHPRGWALWQTIEQHMRKELDAAGYREVKTPQIMDKAFWEKSGHWDNYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTQSEKREYAVKPMNCPGHVQIFNNSLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + +N++ V RI+ + G + ++ P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVDEARRFNELLV---RIYKQFGFHDVAVKLSLRPEKRAGSD 441 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + A+ G + C ++ + P A Y + H Sbjct: 442 DIWDKAEQGLRDALTACGVEWEELPGEG-------------------AFYGPKIEYH--- 479 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATF-KGADGKDHYVQMGSYGIGAMR 323 K R + G + + LP + A + ++G+ V + +G++ Sbjct: 480 -------VKDAIGRSWQCGTL---QLDFVLPDRLDAEYVTESNGRARPVMLHRAILGSLE 529 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ +H G +W +AP ++ ++NI H D C ++ RL V D Sbjct: 530 RFIGILIENHAGSFPLW---LAPVQMVVMNITEHQT---DYCRQVVERLQAENFRVELDL 583 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 584 RNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 621 >gi|39938732|ref|NP_950498.1| prolyl-tRNA synthetase [Onion yellows phytoplasma OY-M] gi|81830053|sp|Q6YQX7|SYP_ONYPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|39721841|dbj|BAD04331.1| prolyl-tRNA synthetase [Onion yellows phytoplasma OY-M] Length = 474 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 78/411 (18%), Positives = 165/411 (40%), Gaps = 71/411 (17%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSY 89 + + +KG +LP G +N+ + +TG + P + L+ E + Sbjct: 31 IAYSEAKGFIIYLPYGYALWENIQKHLNCTLQKTGHQNVYFPLVFPEKLFHKEKNHIQGF 90 Query: 90 GKEMLRLADRNDK----AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDEL 143 E + K ++ PT E + + + I SYR+LP + Q +++ Sbjct: 91 SPEAAMITTTGKKNLSEKLVIRPTSEILFSQYYSKTITSYRDLPKLYNQWCNVVRWEKTT 150 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 +P +R +EFL ++ ++ T + + + +S L I+ +L G Sbjct: 151 KP---FLRGKEFLWQEGHTVHATEQEAM----QQTLSILDIYQKL--------------G 189 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 +L V ET+ F +I+ Y+ + +H Sbjct: 190 KNLLALPFVCGKKTETEKFAGA----------------LIT-----------YSIEALMH 222 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + + ++ G Y GT ++ F+ D + YV S+G+ + R Sbjct: 223 D--------------GQALQAGTSHYLGTNFAKSFQIQFQDCDHQKKYVHQTSWGV-STR 267 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ A+I D +G++ P V+P +I +I ++ D + E +++ L K V D Sbjct: 268 LIGALIMVHSDDEGLVLPPYVSPMQIVIIPLQPQDDAVKQTSENLFSILQK-NYRVHLDL 326 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +F+ +L G PL++ +G + + + +V I R ++++ +++ Sbjct: 327 QDKTAGWKFSQYELKGVPLRIEIGKRGLENDEVTIFQRYNFAKQNIKTKDL 377 >gi|209969467|dbj|BAG80638.1| hypothetic protein [Streptococcus parauberis] Length = 395 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 93/429 (21%), Positives = 173/429 (40%), Gaps = 47/429 (10%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P + S +L+ SG ++ Y Sbjct: 1 MISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPMASVELYKTSGHWEHY 60 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++H+ SYR LP ++ + R E Sbjct: 61 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELPIRIAELGMMHRYEKSGALS 120 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 121 GLQRVREMTLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR---------LS 170 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + D +T + D M EN +L+ + E A Y D Sbjct: 171 YR-----DPKDTHKYYDNDEM-----WENAQAMLKAALDEMGVDYFEAEGEAAFYGPKLD 220 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 221 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 269 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 270 TMERFTAILIETYKGAFPTW---LAPHQVTVIPISNEAHI--DYAWEVAKTLRDRGIRAD 324 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI-NYAS 439 DD E++ + + P Q+IVG K + D V ++ + S+EE + N + Sbjct: 325 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKAVNVRRYGSKATHTESIEEFVDNILA 384 Query: 440 HRFSNNRPV 448 +RPV Sbjct: 385 DIARKSRPV 393 >gi|169347325|ref|ZP_02866263.1| hypothetical protein CLOSPI_00040 [Clostridium spiroforme DSM 1552] gi|169293942|gb|EDS76075.1| hypothetical protein CLOSPI_00040 [Clostridium spiroforme DSM 1552] Length = 479 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 77/347 (22%), Positives = 138/347 (39%), Gaps = 73/347 (21%) Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREF 155 D ++ +I PT E + + + + SYR+LP + Q +++ RP +R EF Sbjct: 103 DNLEENLIIRPTSETLFCEHYAKIVNSYRDLPKLYNQWCSVVRWEKTTRP---FLRGSEF 159 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG--LKSIPMRAESGPIGGDLSHEFIVL 213 L ++ ++ T E + H +M L+I+ L +IP +V Sbjct: 160 LWQEGHTIHATKEEAYHETLQM----LKIYEETARDLLAIP----------------MVT 199 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 E + F + A Y + +H+ K S Sbjct: 200 GRKTEREKFAGAE---------------------------ATYTIEALMHDGKALQS--- 229 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 G YFG ++ F + K YV S+G+ + R++ A+I Sbjct: 230 -----------GTTHYFGQGFAKAFDMKFLSKENKLEYVYQTSWGV-STRLLGAIIMVHG 277 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 D G++ P VAP ++ +I I+ + D ++ RL VG V D + G +F+ Sbjct: 278 DNNGLVLPPRVAPIQVMIIPIQQQKEGVLDKAYELEQRLKAVGIRVKVDASDKTPGWKFS 337 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE----DMSLEEVIN 436 A++ G PL++ +G K +++ + R G++ D SLE+ I Sbjct: 338 DAEMRGIPLRLEIGPKDIANDVCVLAKRNDGMKAVYSLDGSLEDTIK 384 >gi|50365293|ref|YP_053718.1| prolyl-tRNA synthetase [Mesoplasma florum L1] gi|81827288|sp|Q6F0Y9|SYP_MESFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|50363849|gb|AAT75834.1| prolyl-tRNA synthetase [Mesoplasma florum L1] Length = 473 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YF +S P F+ +GK + S+G+ + R++ A+I + D G+ Sbjct: 221 GQALQCGTSHYFADNFSKPYEIKFQNKEGKLEHAYSTSWGV-STRLIGAIIMTHSDDNGL 279 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P V+P ++ LI IK D+V + + A +K D+ D + G + + A++ Sbjct: 280 VLPSMVSPVQVRLIQIKETDEVIKVTEDIKEALKNKYRVDI--DKTDKSFGFKISEAEIK 337 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G PL++ +G + + +++V I R T + +++ EV N Sbjct: 338 GIPLRIEIGPRDLENNQVTISRRDTREKIQVNVNEVTN 375 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 5/57 (8%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYS 162 PT E +M + F++ +KSYR+LP F Q +++ RP +R+ EFL ++ ++ Sbjct: 110 PTSEVLMANFFKNEVKSYRDLPLIFNQWTNVMRWEKTTRP---FLRTSEFLWQEGHT 163 >gi|293363544|ref|ZP_06610300.1| proline--tRNA ligase [Mycoplasma alligatoris A21JP2] gi|292552893|gb|EFF41647.1| proline--tRNA ligase [Mycoplasma alligatoris A21JP2] Length = 478 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 85/392 (21%), Positives = 159/392 (40%), Gaps = 78/392 (19%) Query: 52 NVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLRLADRNDKAM----IY 106 N+N I +E G + +P L L+ +E + + E+ + +K + Sbjct: 53 NLNEIFKER----GVNNVYLPLLIPESLFSLEKDHIEGFNPELATVTHVGNKELQEKYYI 108 Query: 107 GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLT 166 PT E + D+F++ I SY +LP + Q R E + +RSREFL ++ ++ Sbjct: 109 RPTSEVLFADLFKNSIDSYNDLPLVYNQWANVVRWE-KTTNPFLRSREFLWQEGHTCHAD 167 Query: 167 PEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 P ++ M +Y + K+ Sbjct: 168 PIEARKLTRCMISTYAKFL---------------------------------------KN 188 Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGH 286 F+ P +IV + T PY + + +++ ++ R ++ G Sbjct: 189 FLAIP---------------TIVGKKT-PYEKFAGACSTYTVEAMMKDGR----ALQAGT 228 Query: 287 IFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 Y +S P S FK + + V S+G+ + R++ A+I + D +GII P VAP Sbjct: 229 SHYLAQNFSKPYSIVFKNKNNELENVYQTSWGV-STRLIGALIMTHGDNRGIIIPPRVAP 287 Query: 347 FKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 +I LI + A ++ +K+Y L + V D +Q G + A +++ G PL++ Sbjct: 288 IQIDLIELFGAKSAKVKEVSQKLYELLRR-KWRVRVDASDKQPGFKAANSEIQGVPLRIE 346 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +G + + + V I +R D + ++NY Sbjct: 347 IGPRDLENDMVTI------VRRDTLEKTLVNY 372 >gi|327490276|gb|EGF22064.1| threonine--tRNA ligase [Streptococcus sanguinis SK1058] Length = 647 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 160/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYYDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQMAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V D V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 616 >gi|319936200|ref|ZP_08010620.1| prolyl-tRNA synthetase [Coprobacillus sp. 29_1] gi|319808774|gb|EFW05307.1| prolyl-tRNA synthetase [Coprobacillus sp. 29_1] Length = 479 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 87/410 (21%), Positives = 160/410 (39%), Gaps = 70/410 (17%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSY 89 M + KG + P G + + A + ++ TG + +P L + L E+ + + Sbjct: 32 MDYSSVKGFIIYRPYGYALWEMIQAYMDKKFKETGHENVYMPMLIPESLLQKEADHVEGF 91 Query: 90 GKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDEL 143 E + D ++ +I PT E + + + + SYR+LP + Q +++ Sbjct: 92 APECAVVTRGGLDNLEENLIIRPTSETLFCEHYAKIVNSYRDLPKLYNQWCSVVRWEKTT 151 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 RP +R EFL ++ ++ T E ++ +M Y L +IPM Sbjct: 152 RP---FLRGSEFLWQEGHTIHATEEEARAETMQMLDIYEETSR--NLLAIPM-------- 198 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 V E + F +E T Y + +H Sbjct: 199 --------VTGKKTEREKFAG---------AEET------------------YTIEALMH 223 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + K S G YFG ++ F D K YV S+G+ + R Sbjct: 224 DGKALQS--------------GTSHYFGDGFAKAFGIQFLDKDNKQKYVHQTSWGV-STR 268 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ A+I D G++ P VAP ++ +I I+ D ++ +L G V D Sbjct: 269 LLGAIIMVHGDDNGLVLPPRVAPTQVMIIPIQQQKDGVLDKAYELEQQLKAHGIRVKVDA 328 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +F+ A++ G PL++ VG + + + + + R+ G + +SL+E Sbjct: 329 TDKSPGWKFSEAEMRGIPLRLEVGPRDLENGQCVVAKRVNGEKITLSLDE 378 >gi|125973743|ref|YP_001037653.1| threonyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|256005747|ref|ZP_05430701.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281417900|ref|ZP_06248920.1| threonyl-tRNA synthetase [Clostridium thermocellum JW20] gi|166223337|sp|A3DET1|SYT_CLOTH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|125713968|gb|ABN52460.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|255990281|gb|EEU00409.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281409302|gb|EFB39560.1| threonyl-tRNA synthetase [Clostridium thermocellum JW20] gi|316940063|gb|ADU74097.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 1313] Length = 635 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 98/416 (23%), Positives = 172/416 (41%), Gaps = 57/416 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I++ G ++P G + + REE + G E+ P + + +LW SG +D Y K Sbjct: 255 IYEEGPGFPFFMPKGMVLRNVLEEYWREEHRKAGYQEIKTPIILNEELWHRSGHWDHY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + ++ P + +++ + SYR+LP ++ L R EL G+M Sbjct: 314 ENMYFTKIDEADFAIKPMNCPGGMLVYKRKLHSYRDLPQRLAELGLVHRHELSGVLHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL-GLK---SIPMRAESGPIGGDL 206 R R F DA+ F +TP+ + + +S + F+++ G K + R E+ +G D Sbjct: 374 RVRCFTQDDAHIF-MTPDQIESEILGV-ISLIDDFYKVFGFKYHVELSTRPENS-MGSDE 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E T + K +D+ I + F Y D H Sbjct: 431 DWE----RATNALKNALEKKGIDYKINEGDGAF----------------YGPKIDFH--- 467 Query: 267 LFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM 322 L DS+ R + G I F ++ L T+ G DG+ H V + G++ Sbjct: 468 LEDSI-------GRTWQCGTIQLDFQMPERFDL----TYIGPDGEKHRPVMIHRVVFGSI 516 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVF 380 A++ + G +W ++P ++ ++ I K HD V ++ L + G V Sbjct: 517 ERFIAILTEHYAGAFPVW---LSPVQVKILPILEKQHDYVA-----EVKKALEEKGVRVE 568 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + A L P +++G K + + V ++ R G M LE+ +N Sbjct: 569 ADLRNEKIGYKIREAQLEKVPYMLVIGDKEMENRTVAVRSRKDGDLGPMRLEDFVN 624 >gi|205373971|ref|ZP_03226772.1| prolyl-tRNA synthetase [Bacillus coahuilensis m4-4] Length = 476 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 83/398 (20%), Positives = 162/398 (40%), Gaps = 71/398 (17%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLRLA----D 98 P G K +++ + + TG + +P + + L VE + + E+ + + Sbjct: 43 PYGYKIWEHIKDQLDRKIKETGHENVYMPLFIPESLLQVEKDHIEGFAPEVAWVTHGGEE 102 Query: 99 RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFL 156 + + + PT E + + +R+ I SYR+LP + Q +++ RP +R+ EFL Sbjct: 103 KLQERLCVRPTSEVLFAEHYRNIIHSYRDLPKLYNQWANVVRWEKTTRP---FLRTLEFL 159 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 ++ ++ T + + KM Y I L +IP ++ Sbjct: 160 WQEGHTCHETEQEAIEETEKMLNVYATICEEL--LAIP----------------VIRGRK 201 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 E + F F ++ S++ A AATS Sbjct: 202 TEKEKFAGATFT--------------YTIESLMHDGKALQAATS---------------- 231 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + G +++ S TF +G++ +VQ S+G R++ A+I D + Sbjct: 232 -----------HFLGDRFAEAFSITFLNREGREQHVQQTSWGF-TTRIIGAMIMVHGDNR 279 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G++ P +VAP ++ ++ I H + D + R+ V V D +Q G +F ++ Sbjct: 280 GLVLPPNVAPTQVMIVPIAQHKEGVLDHAYGLKERVKTVA-RVDIDASDKQPGWKFNESE 338 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G P+++ VG K + +V + R TG + + + EV Sbjct: 339 MKGIPIRLEVGPKDMEQDQVILVRRDTGEKVQVGISEV 376 >gi|332521716|ref|ZP_08398167.1| prolyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4] gi|332042546|gb|EGI78747.1| prolyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4] Length = 492 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 70/357 (19%), Positives = 143/357 (40%), Gaps = 71/357 (19%) Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D+ GK + + ++ ++ PT E ++ + ++ I+SYR+LP Q R E+R R Sbjct: 102 DNEGKLRVDPEAKLEEELVVRPTSEAIIWNTYKGWIQSYRDLPLLINQWANVVRWEMRTR 161 Query: 147 FGVMRSREFLMKD---AYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 +R+ EFL ++ A+ + + N ++ ++ F + P+ Sbjct: 162 L-FLRTAEFLWQEGHTAHETRVEALAEAETMNNVYATFAEEFMAI------------PVV 208 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 L E A ET +C + M Sbjct: 209 QGLKSESERFAGAEET--YCIEALMQ---------------------------------- 232 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + ++ G + G ++ F +GK YV S+G+ + R Sbjct: 233 --------------DGKALQAGTSHFLGQNFAKAFDVKFTNKEGKQDYVWATSWGV-STR 277 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR---DACEKIYARLSKVGCDVF 380 ++ A+I + D +G++ P ++AP ++ ++ I D+ D I L V Sbjct: 278 LMGALIMTHSDDQGLVLPPNLAPNQVVIVPIYKTDEQLEQITDVVNGIMKDLRAKHITVK 337 Query: 381 WDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +D+ + G++FA +L G PL++ +G++ + + VE+ R +E + LE +++ Sbjct: 338 FDNRTTHRPGAKFAQHELQGVPLRIAIGARDLENGTVELARRDILTKETVYLESLVD 394 >gi|212691282|ref|ZP_03299410.1| hypothetical protein BACDOR_00773 [Bacteroides dorei DSM 17855] gi|237712289|ref|ZP_04542770.1| threonyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] gi|237726428|ref|ZP_04556909.1| threonyl-tRNA synthetase [Bacteroides sp. D4] gi|212666514|gb|EEB27086.1| hypothetical protein BACDOR_00773 [Bacteroides dorei DSM 17855] gi|229434954|gb|EEO45031.1| threonyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4] gi|229453610|gb|EEO59331.1| threonyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] Length = 646 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 99/440 (22%), Positives = 167/440 (37%), Gaps = 70/440 (15%) Query: 25 LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESG 84 L + T M+ KG+ WLP G + +R Q R E+ P + + +L++ SG Sbjct: 252 LFMFTDMV---GKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIGNKNLYITSG 308 Query: 85 RYDSYGKEMLRLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 Y YGK+ + ++ Y P + I+++ +SY++LP + R E Sbjct: 309 HYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRIAEFGTVCRYE 368 Query: 143 LRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 G+ R R F DA+ F P+ K + ++ +F + +++ + Sbjct: 369 QSGELHGLTRVRSFTQDDAHLF-CRPDQVKEEFLRVMDIINIVFKSMNFENVEAQ----- 422 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD 261 I L D + + D E W A + Sbjct: 423 ---------ISLRDKVNREKYIGSD-----------------------ENWEKAEQAIIE 450 Query: 262 VHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGK 308 EK + E + G + +G + GT Y+LP + G+D + Sbjct: 451 ACEEKGLTAKVEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQ 510 Query: 309 DHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDA 364 H V + G+M R VA +IE + GK +W PD VA IS + + Sbjct: 511 KHRPVMIHRAPFGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNEY 561 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 EK+ A L K DD E+IG + ++ P +IVG K + +V ++ + G Sbjct: 562 AEKVKAELRKFDVRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVRKQGEG 621 Query: 425 IREDMSLEEVINYASHRFSN 444 + M +EE + SN Sbjct: 622 DKGTMKIEEFGKNIAEEVSN 641 >gi|315223470|ref|ZP_07865327.1| proline--tRNA ligase [Capnocytophaga ochracea F0287] gi|314946643|gb|EFS98634.1| proline--tRNA ligase [Capnocytophaga ochracea F0287] Length = 492 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 73/350 (20%), Positives = 149/350 (42%), Gaps = 65/350 (18%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GK M+ + ++ +I PT E ++ + +++ I+SYR+LP Q R E+R R Sbjct: 105 GKLMVDPEAKLEEELIVRPTSEAIIWNTYKNWIQSYRDLPILINQWANVVRWEMRTRL-F 163 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E + KM Y + Sbjct: 164 LRTAEFLWQEGHTAHATKEEAIEEAQKMMNVYA--------------------------D 197 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 F+ ++FM P+ I + S E+ +A D + + Sbjct: 198 FV-------------ENFMAVPV---------IKGVKSESER----FAGADDTY---CIE 228 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 +L ++ + ++ G + G ++ + +GK YV S+G+ + R++ A+I Sbjct: 229 ALMQD----GKALQAGTSHFLGQNFAKAFDVKYVSKEGKQEYVWASSWGV-STRLMGALI 283 Query: 330 ESSHDGKGIIWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDMGE 386 + D G++ P +AP ++ ++ I K +Q+ + + L K V +DD Sbjct: 284 MTHSDDNGLVLPPKLAPIQVVIVPIYKGAEQLEKVHSHIQPLIEELKKHNISVKFDDRDT 343 Query: 387 QI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 Q G +F +L G P+++ VG + + + E+ R T +E ++ +++ Sbjct: 344 QSPGFKFHEYELKGIPVRLAVGQRDIEHNTFEVARRDTLTKETVAGGQIV 393 >gi|225630645|ref|YP_002727436.1| threonyl-tRNA synthetase [Wolbachia sp. wRi] gi|254783546|sp|C0R403|SYT_WOLWR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225592626|gb|ACN95645.1| threonyl-tRNA synthetase [Wolbachia sp. wRi] Length = 633 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 100/442 (22%), Positives = 170/442 (38%), Gaps = 48/442 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 R+K L E ++AE H+ + + I + + G W G + + + IR+ Sbjct: 221 RNKDELNAYLECLKEAEKRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRK 280 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 + G E+ P L S +LW +SG +D + + M + + K + P + IF Sbjct: 281 KLINNGYFEVKTPILVSKELWEKSGHWDKFRENMFIVDESESKKLAIKPMNCPCHVQIFN 340 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 SH +SYR+LP + R+E G+MR R F DA+ F + E +S F Sbjct: 341 SHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCM--EEQVNSETIKF 398 Query: 179 VSYLR-IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L+ ++ LG I ++ P E A+ + P E Sbjct: 399 CDLLKEVYSELGFNEISVKFSDRPDVRAGDDEVWDRAEKALLEAVKEAGLSYELSPGEGA 458 Query: 238 DFD---DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 + + + ++I W + LPE R+ A FY G Sbjct: 459 FYGPKLEFVLKDAIGRSWQCGTLQVDFI--------LPE--RLGA--------FYIG--- 497 Query: 295 SLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 ADG K H V + +G ++ ++ GK +W +AP +++++ Sbjct: 498 ----------ADGHKHHPVMLHRAILGTFERFIGILIENYAGKFPVW---LAPTQLAILT 544 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I KI L + G V D E+I + + L P+ IVG V+ Sbjct: 545 ITNE---ADGYATKISNVLKEQGVRVKTDLTNEKISYKIRLHSLNKVPILWIVGKNEVTS 601 Query: 414 SKVEIKHRLTGIREDMSLEEVI 435 V +++ + +E SLE+ I Sbjct: 602 KTVSVRNLGSERQESFSLEKAI 623 >gi|291515023|emb|CBK64233.1| prolyl-tRNA synthetase [Alistipes shahii WAL 8301] Length = 494 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/346 (19%), Positives = 145/346 (41%), Gaps = 79/346 (22%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEELIVRPTSETIIWNTYKNWIQSYRDLPILCNQWANVVRWEMRTRL-FLRTAEFLWQEG 176 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E + KM +R++ + Sbjct: 177 HTAHATREEAVEEAEKM----IRVYRKF-------------------------------- 200 Query: 221 VFCSKDFMDFPI----PSENTDF---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 ++++M P+ S N F +D +++ ++++ Sbjct: 201 ---AEEWMSLPVVVGHKSPNERFAGAEDTLTIEALMQ----------------------- 234 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 + ++ G + G ++ + +GK YV S+G+ + R++ A+I + Sbjct: 235 ----DGKALQSGTSHFLGQNFAKAFDVQYVNKEGKLEYVWATSWGV-STRLMGALIMAHS 289 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDMGE-QIG 389 D G++ P +AP ++ ++ I + + C + I A L G V DD + G Sbjct: 290 DNNGLVLPPKLAPIQVVMVPIYKTPEQLAEICARFGAIAAELRDKGISVKIDDRDNVRPG 349 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +FA +L G P+++ +G + + + +E+ R T ++ +S E ++ Sbjct: 350 FKFAEYELKGVPVRLAMGGRDLENGTIELVRRDTLEKQTISQEGLV 395 >gi|326317187|ref|YP_004234859.1| threonyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374023|gb|ADX46292.1| threonyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 639 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 89/388 (22%), Positives = 153/388 (39%), Gaps = 50/388 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I +HS G W P G V +R+ G E+ P + LW ++G +D Y + Sbjct: 255 IDEHSPGTVFWHPKGWTIWQGVEQYMRQVYRDNGYQEVKGPQILDKHLWEKTGHWDKYRE 314 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M ++++D A+ P + IF +KSYR+LP + + R+E G+ Sbjct: 315 NMFTTESEKHDYAL--KPMNCPGHILIFNQGVKSYRDLPLRYGEFGQCHRNEPTGGLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGD 205 MR R F D + F + + N F S L +++ G I + + P IG + Sbjct: 373 MRVRAFTQDDGHIFCTEDQIQQECIN--FTSLLQKVYKDFGFTDIIYKVATRPEKRIGSE 430 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 S D E + S + + D+ + + + Sbjct: 431 ES------WDKAENALIES-------LKASGCDYQIAVGDGAF--------------YGP 463 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAM 322 KL +L + R + G I S+P + A + G DG+ H + + +G++ Sbjct: 464 KLEYTL---RDAIGRHWQCGTI---QVDPSMPERLGAEYVGEDGQRHRPIVLHRAIVGSL 517 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFW 381 ++ H G +W +AP +++++NI A D CR+ K+ L G V Sbjct: 518 ERFIGILIEQHAGALPVW---LAPVQVAVLNITGAQDDYCREIAAKLQKALPNQGLRVEL 574 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSK 409 D E+I + L P ++VG K Sbjct: 575 DLRNEKITYKIREHSLQKLPYILVVGDK 602 >gi|146340273|ref|YP_001205321.1| putative threonine tRNA synthetase (fragment) [Bradyrhizobium sp. ORS278] gi|146193079|emb|CAL77090.1| putative threonine tRNA synthetase (fragment) [Bradyrhizobium sp. ORS278] Length = 409 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G+ W P G + IR + R G E+ P L DLW++SG ++ +G Sbjct: 18 IQEDAPGMVFWHPRGHALYRVLENFIRGKMRRLGYAEVRTPQLLPLDLWMQSGHWEKFGA 77 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +M L + ++AM P IF +++S+R LP + + RDE G+M Sbjct: 78 QMFALGE-GERAMALKPMSCPCHVQIFNRNLRSWRELPLRYAEFGSCHRDEPSGALHGLM 136 Query: 151 RSREFLMKDAYSF 163 R+R F DA+ F Sbjct: 137 RTRGFEQDDAHVF 149 >gi|225076640|ref|ZP_03719839.1| hypothetical protein NEIFLAOT_01690 [Neisseria flavescens NRL30031/H210] gi|224952046|gb|EEG33255.1| hypothetical protein NEIFLAOT_01690 [Neisseria flavescens NRL30031/H210] Length = 643 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 83/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +++Y Sbjct: 261 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNVAGYKEVKTPQIMDKTFWEKSGHWENYKD 320 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 321 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 379 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 380 RVRGFVQDDAHIFCTEDQIVDEARAFNELLV---RIYKQFGFHDVAVKLSLRPEQRAGSD 436 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 E A+ G + +P E + I +++ W V E Sbjct: 437 EVWDKAEQGLRDALTACGVEWEELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 496 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 497 RLNAEYVTENNDRARPVML-------------------------HRAILGSLE----RFI 527 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G V D Sbjct: 528 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAAGFRVELDLRN 580 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 581 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 616 >gi|329115958|ref|ZP_08244675.1| threonine--tRNA ligase [Streptococcus parauberis NCFD 2020] gi|326906363|gb|EGE53277.1| threonine--tRNA ligase [Streptococcus parauberis NCFD 2020] Length = 648 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 93/429 (21%), Positives = 173/429 (40%), Gaps = 47/429 (10%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P + S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPMASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++H+ SYR LP ++ + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELPIRIAELGMMHRYEKSGALS 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 374 GLQRVREMTLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR---------LS 423 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + D +T + D M EN +L+ + E A Y D Sbjct: 424 YR-----DPKDTHKYYDNDEM-----WENAQAMLKAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 523 TMERFTAILIETYKGAFPTW---LAPHQVTVIPISNEAHI--DYAWEVAKTLRDRGIRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI-NYAS 439 DD E++ + + P Q+IVG K + D V ++ + S+EE + N + Sbjct: 578 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKAVNVRRYGSKATHTESIEEFVDNILA 637 Query: 440 HRFSNNRPV 448 +RPV Sbjct: 638 DIARKSRPV 646 >gi|228967672|ref|ZP_04128693.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228792048|gb|EEM39629.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] Length = 645 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 95/424 (22%), Positives = 175/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DGK H + G+ + R VA +IE KG +P +AP ++ +I + Sbjct: 506 ---TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|205374566|ref|ZP_03227362.1| threonyl-tRNA synthetase [Bacillus coahuilensis m4-4] Length = 643 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 88/389 (22%), Positives = 163/389 (41%), Gaps = 40/389 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ + G + P L S DL+ SG +D Y + M + Sbjct: 264 QGLPLWLPKGATVRRMIERYIVDKEEKLGYDHVYTPVLGSVDLYKTSGHWDHYQENMFPV 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I+++ I SYR LP ++ R E+ G+ R R Sbjct: 324 MEMDNEELVLRPMNCPHHMMIYKNGIHSYRELPIRIAELGTMHRYEMSGALAGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ + ++ LK R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKEEFKRVVRLVMEVYKDFDLKDYSFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFM---DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 +T+ + D M + E D D+ + E A Y DV ++ +L Sbjct: 429 PEDTEKYFDDDQMWERAQSMLKEAMDELDVHYFEADGE--AAFYGPKLDV---QVKTALG 483 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIE 330 + + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 484 KEETLSTVQLD----FLLPERFDL----TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIE 535 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ +I + V D +K+ L G D E+IG Sbjct: 536 EY---KG-AFPTWLAPVQVQVIPVSP--DVHFDYAKKVQEELRSAGIRADLDSRDEKIGY 589 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + A + P ++VG + + V ++ Sbjct: 590 KIREAQMQKIPYMLVVGDNEIEEEAVNVR 618 >gi|332878705|ref|ZP_08446422.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683342|gb|EGJ56222.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 647 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 100/444 (22%), Positives = 169/444 (38%), Gaps = 63/444 (14%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T ++ +G+ WLP G + + A +R+ Q G Sbjct: 230 YLTLLEEAKKRDHRKLGKELELFT-FSNKVGQGLPLWLPKGAALRERLEAFLRKAQKEAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR-LADRND-KAMIYGPTHEEVMTDIFRSHIK 123 ++ P + +L+V SG +D YGK+ + +A N+ + + P + +I+ SH Sbjct: 289 YEQVVTPHIGHKNLYVTSGHWDKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNSHPW 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP F + +R E G+ R R F DA+ F TPE + + L Sbjct: 349 SYKDLPKRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIF-CTPEQLDAEFKHVIDLVL 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F LG + + + L D D P TD Sbjct: 408 YVFGSLGFDNFTAQ--------------VSLRDP------------DNPTKYIGTD---- 437 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT-- 292 E W A + EK + + E + G + +G + GT Sbjct: 438 -------ENWAKAENAIINAAKEKGLNYVIETGEAAFYGPKLDFMVKDALGRSWQLGTIQ 490 Query: 293 -KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y+LP +KGAD + H V + G+M A++ G +W + Sbjct: 491 VDYNLPERFDLWYKGADNEMHRPVMIHRAPFGSMERFVAILLEHTAGNFPLWLNPNQAIV 550 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 +SL + + +K+ L D+ E +G + A+ P +IVG Sbjct: 551 LSL------SEKYENYAQKVLRLLENSDIRTLIDNRAETMGKKIREAETQKVPYMLIVGE 604 Query: 409 KFVSDSKVEIKHRLTGIREDMSLE 432 + V ++ R MS+E Sbjct: 605 NEEKEGTVSVRKRGGEDLGSMSVE 628 >gi|218899729|ref|YP_002448140.1| threonyl-tRNA synthetase [Bacillus cereus G9842] gi|228903093|ref|ZP_04067229.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228910399|ref|ZP_04074214.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|218543438|gb|ACK95832.1| threonyl-tRNA synthetase [Bacillus cereus G9842] gi|228849165|gb|EEM94004.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228856502|gb|EEN01026.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 645 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 95/424 (22%), Positives = 175/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DGK H + G+ + R VA +IE KG +P +AP ++ +I + Sbjct: 506 ---TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|265751997|ref|ZP_06087790.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] gi|263236789|gb|EEZ22259.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] Length = 646 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 99/440 (22%), Positives = 167/440 (37%), Gaps = 70/440 (15%) Query: 25 LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESG 84 L + T M+ KG+ WLP G + +R Q R E+ P + + +L++ SG Sbjct: 252 LFMFTDMV---GKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIGNKNLYITSG 308 Query: 85 RYDSYGKEMLRLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 Y YGK+ + ++ Y P + I+++ +SY++LP + R E Sbjct: 309 HYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRIAEFGTVCRYE 368 Query: 143 LRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 G+ R R F DA+ F P+ K + ++ +F + +++ + Sbjct: 369 QSGELHGLTRVRSFTQDDAHLF-CRPDQVKEEFLRVMDIINIVFKSMNFENVEAQ----- 422 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD 261 I L D + + D E W A + Sbjct: 423 ---------ISLRDKVNREKYIGSD-----------------------ENWEKAEQAIIE 450 Query: 262 VHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGK 308 EK + E + G + +G + GT Y+LP + G+D + Sbjct: 451 ACEEKGLTAKVEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQ 510 Query: 309 DHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDA 364 H V + G+M R VA +IE + GK +W PD VA IS + + Sbjct: 511 KHRPVMIHRAPFGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNEY 561 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 EK+ A L K DD E+IG + ++ P +IVG K + +V ++ + G Sbjct: 562 AEKVKAELRKYDVRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVRKQGEG 621 Query: 425 IREDMSLEEVINYASHRFSN 444 + M +EE + SN Sbjct: 622 DKGTMKIEEFGKNLAEEVSN 641 >gi|323351205|ref|ZP_08086861.1| threonine--tRNA ligase [Streptococcus sanguinis VMC66] gi|322122429|gb|EFX94140.1| threonine--tRNA ligase [Streptococcus sanguinis VMC66] Length = 647 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 159/399 (39%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVGLYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K V D V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 616 >gi|325678420|ref|ZP_08158040.1| proline--tRNA ligase [Ruminococcus albus 8] gi|324109921|gb|EGC04117.1| proline--tRNA ligase [Ruminococcus albus 8] Length = 480 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/354 (20%), Positives = 138/354 (38%), Gaps = 69/354 (19%) Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRS 152 +L DR + PT E + + + + + SYR+LP + Q +++ RP +RS Sbjct: 105 KLEDR----LCVRPTSETLFCEHYANIVHSYRDLPKLYNQWVSVVRWEKTTRP---FLRS 157 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 REFL ++ ++ T E + +M Y Sbjct: 158 REFLWQEGHTIHETAEEAIEETERMLNCY------------------------------- 186 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 AD FC K+ + TD D A YA + +H+ Sbjct: 187 -AD------FCEKELAMPVVKGRKTDSDKFAGAE-------ATYAIEALMHD-------- 224 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 + ++ G YFG ++ F G D K Y S+G+ R++ A+I + Sbjct: 225 ------GKALQAGTSHYFGDGFARAFDIQFTGRDNKLSYPHQTSWGV-TTRLIGAIIMTH 277 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D G++ P +VAP + ++ I+ + + +++ +L G V DD + G +F Sbjct: 278 GDDNGLVLPPAVAPIQAVIVPIQQFKEGVLEKAQEVCEQLKAAGIRVKVDDSEQSPGWKF 337 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 A ++ G P+++ +G K + + + I R + L E++ + + R Sbjct: 338 AEYEMKGVPVRIELGPKDIENGQCVIVTRHDREKTFTPLTELVETVNAKLEAVR 391 >gi|319943475|ref|ZP_08017757.1| threonine--tRNA ligase [Lautropia mirabilis ATCC 51599] gi|319743290|gb|EFV95695.1| threonine--tRNA ligase [Lautropia mirabilis ATCC 51599] Length = 636 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 93/422 (22%), Positives = 160/422 (37%), Gaps = 49/422 (11%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + H ++ G+ W P G + IRE+ + Sbjct: 231 YLHMLEE----AEKRDHRKLGKDLDLFHTQAEAPGMVFWHPRGWTIWQRIEQYIREKYQK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + DLW SG +D+Y KE + ++ + P + +F + ++ Sbjct: 287 NGYQEVRCPQILDVDLWKRSGHWDNY-KENMFFSESEKREYAVKPMNCPGHVQLFNASLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F D + F T E + + Sbjct: 346 SYRDLPLRYAEFGSCHRNEPSGALHGIMRVRGFTQDDGHIF-CTEEQVEAEVTAFHQQAM 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + ++ P + E A+ + D +P E Sbjct: 405 AVYRDFGFTDVSVKLALRPTQRLGTDEAWDRAENALRAALSACDVAWEELPGEG------ 458 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSA 300 A Y + H L DS+ R +VG I Y +P + A Sbjct: 459 -----------AFYGPKIEYH---LKDSI-------GRAWQVGTIQY---DPMMPERLDA 494 Query: 301 TFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + + + +G+M ++ H G W +AP +++++ + Sbjct: 495 EYVAEDNSRRRPIMLHRAIVGSMERFIGMLIEHHAGAMPTW---LAPVQVAVLTVT---D 548 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E I RL K G V D G++IG + L P V+VG K + ++ Sbjct: 549 TAADYAEDIRQRLIKQGFRVISDLRGDKIGYKIREHSLQKIPYLVVVGEKDRQAGTLAVR 608 Query: 420 HR 421 R Sbjct: 609 AR 610 >gi|228941754|ref|ZP_04104301.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974678|ref|ZP_04135244.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981272|ref|ZP_04141572.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228778472|gb|EEM26739.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228785081|gb|EEM33094.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817966|gb|EEM64044.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942359|gb|AEA18255.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 645 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 95/424 (22%), Positives = 175/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DGK H + G+ + R VA +IE KG +P +AP ++ +I + Sbjct: 506 ---TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|213963363|ref|ZP_03391619.1| threonyl-tRNA synthetase [Capnocytophaga sputigena Capno] gi|213954031|gb|EEB65357.1| threonyl-tRNA synthetase [Capnocytophaga sputigena Capno] Length = 647 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 89/413 (21%), Positives = 155/413 (37%), Gaps = 61/413 (14%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 +G+ WLP G + + A +R+ Q + G ++ P + +L+V SG +D YGK+ + Sbjct: 260 QGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHIGHKNLYVTSGHWDKYGKDSFQP 319 Query: 96 LADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 +A N+ + + P + +I+ SH SY++LP F + +R E G+ R R Sbjct: 320 IATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPKRFAEFGTVYRYEQSGELHGLTRVR 379 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TPE + + L +F LG + + + L Sbjct: 380 CFTQDDAHIF-CTPEQLDDEFKHVIDLVLYVFGSLGFDNFTAQ--------------VSL 424 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + D E W A + EK + + E Sbjct: 425 RDPENLSKYIGSD-----------------------ENWAKAENAIINAAKEKGLNYVIE 461 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP +KGAD + H V + Sbjct: 462 TGEAAFYGPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPF 521 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G+M A++ G +W + +SL + + +K+ + L Sbjct: 522 GSMERFVAILLEHTAGNFPLWLNPNQAIILSL------SEKYENYAQKVLSLLENSDIRT 575 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 D+ E +G + A+ P +IVG + V ++ R MS+E Sbjct: 576 LIDNRAETMGKKIREAETQKIPYMLIVGENEEKEGTVSVRKRGGEDLGSMSVE 628 >gi|23099609|ref|NP_693075.1| threonine-tRNA ligase [Oceanobacillus iheyensis HTE831] gi|73919811|sp|Q8EPF3|SYT_OCEIH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|22777839|dbj|BAC14110.1| threonine-tRNA ligase [Oceanobacillus iheyensis HTE831] Length = 646 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 89/416 (21%), Positives = 175/416 (42%), Gaps = 40/416 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G NV I + + R G + P L + +L+ SG +D Y +M Sbjct: 263 QGLPLWLPKGATIRRNVERYIVDLEERLGYSHVYTPVLGNVELYKTSGHWDHYQDDMFPT 322 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + +F++ + SYRNLP ++ R E+ G+ R R Sbjct: 323 MEMDNEELVLRPMNCPHHMMVFKNQLWSYRNLPVRIAELGTMHRHEMSGALAGLQRVRAM 382 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F P+ K + ++ ++ G+ R LS+ D Sbjct: 383 TLNDAHIF-ARPDQLKEEFIRVVELVQHVYKDFGIDDYYFR---------LSYR-----D 427 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M + + + ++L + E A Y DV ++ +L ++ Sbjct: 428 PEDKEKYVDNDEMWEKAQAMLKETMEDMNLEYVEAEGEAAFYGPKLDV---QVKTALGKD 484 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F+ ++ L T+ G DG H + G+ + R VA +IE Sbjct: 485 ETLSTIQLD----FHLPERFDL----TYIGEDGNQHRPVVIHRGVVSTMERFVAFLIEEY 536 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ +I +++AH +D EK+ + G V D+ E+IG Sbjct: 537 ---KG-AFPTWLAPVQVKIIPVSLQAHLDYAKDIEEKLRYQ----GVRVELDERDEKIGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + A P +++G K + + V + E + ++ +N N + Sbjct: 589 KIREAQTQKVPFALVLGDKEMESNSVNYRRYGEQDTETLEFDQFLNLIKEEVDNKK 644 >gi|120554978|ref|YP_959329.1| threonyl-tRNA synthetase [Marinobacter aquaeolei VT8] gi|166223352|sp|A1U2C3|SYT_MARAV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120324827|gb|ABM19142.1| Ser-tRNA(Thr) hydrolase [Marinobacter aquaeolei VT8] Length = 641 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 95/423 (22%), Positives = 173/423 (40%), Gaps = 67/423 (15%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ + G+ H + + G+ W P G V +R +Q++ G E+ P Sbjct: 237 EAEKRDHRKIGKKLGLFHMQEEAPGMVFWHPDGWSLYQEVEQYMRAQQHKHGYKEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + S LW +SG +D + +M ++++D A+ P + +F +KSY++LP Sbjct: 297 VVSRTLWEKSGHWDKFKDDMFTTESEKHDYAI--KPMNCPCHVQVFNQGLKSYKDLPLRL 354 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGL 190 + R+E G+MR R F DA+ F E + F++ L I+ G Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFTQDDAHIF--CEEDAIQEEVSAFIAMLHEIYADFGF 412 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIV 249 I + + P S E ++ Q +++ +D+ +P E + I + Sbjct: 413 SEILYKLSTRPEKRVGSDEVWDKSEAALEQAL-NREGVDWELLPGEGAFYGPKIEFS--- 468 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKG 304 L D L G ++ GT +S+P + A + Sbjct: 469 -----------------LKDCL-------------GRVWQCGTIQVDFSMPGRLGAQYVA 498 Query: 305 ADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + + H +GS+ R + +IE ++G W +AP +++++NI Sbjct: 499 DNSERKTPVMLHRAVLGSF----ERFIGILIE-EYEGAFPTW---LAPTQVAVLNITDKQ 550 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 RD C+ + +L G V D E+IG + L P V+VG K + ++ V + Sbjct: 551 ---RDYCQNLAKKLDSSGYRVNADLRNEKIGFKIREHTLNKVPYLVVVGDKEIENNAVAV 607 Query: 419 KHR 421 + R Sbjct: 608 RTR 610 >gi|284037110|ref|YP_003387040.1| threonyl-tRNA synthetase [Spirosoma linguale DSM 74] gi|283816403|gb|ADB38241.1| threonyl-tRNA synthetase [Spirosoma linguale DSM 74] Length = 647 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 97/412 (23%), Positives = 170/412 (41%), Gaps = 53/412 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + + +R+ Q R G + P + S L+V SG ++ YG++ + Sbjct: 268 GLPLWLPKGTVLRERLENFLRKAQVRAGYSPVVTPHIGSKQLYVTSGHWEKYGEDSFQPI 327 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 R D N++ ++ P + +I+++ +SYR+LP + +R E G+ R R Sbjct: 328 RTPDPNEEFLL-KPMNCPHHCEIYKTKPRSYRDLPLRLAEFGTVYRYEQSGELHGLTRVR 386 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K + K+ L +F+ LG D S + + Sbjct: 387 GFTQDDAHIF-CRPDQVKEEFMKVIDLVLYVFNTLGF-------------SDYSAQISLR 432 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 +T+ S D + S + L ++ E A + + KL D + Sbjct: 433 DPENKTKYIGSDDLWE-KAESAIIEAAAEKGLPTVTELGEAAF------YGPKL-DFMVR 484 Query: 274 NKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAM-RVVA 326 + +G + GT Y+LP + GAD + H V + G+M R +A Sbjct: 485 DA--------IGRKWQLGTIQVDYNLPNRFELEYIGADNQKHRPVMIHRAPFGSMERFIA 536 Query: 327 AVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +IE+S G +W PD +A IS + D ++ L + F D Sbjct: 537 ILIENS-GGNFPLWLSPDQIAILPIS--------EKYEDYANDLFFSLQENDIRGFVDLR 587 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+IG + A++ P +IVG K ++ V ++ + G M + + I Sbjct: 588 DEKIGRKIRDAEVNKVPYMLIVGEKEAAEGTVSVRRKGQGDLGSMPIADFIQ 639 >gi|325263795|ref|ZP_08130528.1| threonine--tRNA ligase [Clostridium sp. D5] gi|324030833|gb|EGB92115.1| threonine--tRNA ligase [Clostridium sp. D5] Length = 641 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 106/459 (23%), Positives = 177/459 (38%), Gaps = 74/459 (16%) Query: 15 PRDAEIASHKLMLRTGMIHQHSK---------------GIYSWLPLGQKALDNVNAIIRE 59 P+ AE+ + ML H K G +LP G + + RE Sbjct: 222 PKKAELDEYLTMLEEAKKRDHRKLGKELGLFMMRDEGPGFPFFLPKGMVLKNTLLDYWRE 281 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIF 118 +R G +E++ P + S LW SG +D Y M + D D A+ P + ++ Sbjct: 282 IHSRNGYVEIATPIMLSRHLWETSGHWDHYKDNMYTTVIDEEDFAI--KPMNCPGGILVY 339 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +S +SYR+LP ++ L R E + G+MR R F DA+ F + PE + + Sbjct: 340 QSEPRSYRDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIF-MMPEQIRDEIKDV 398 Query: 178 FVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 ++ G K + R E +G D E A G + D ++ P Sbjct: 399 ARLIDEVYSLFGFKYHVELSTRPEDS-MGSDEDWEMATEALRG------ALDDLELPYVV 451 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT-- 292 D A Y D H E DS +G + GT Sbjct: 452 NEGD--------------GAFYGPKIDFHLE---DS-------------IGRTWQCGTIQ 481 Query: 293 -KYSLPM--SATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPF 347 + LP+ + GADG+ H + + G++ R + +IE +P +AP Sbjct: 482 LDFQLPLRFDLEYTGADGEKHRPIMIHRVAFGSIERFIGILIEHFAGA----FPTWLAPV 537 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 ++ ++ I D+ + +K+ L+K G D E+IG + A + P ++VG Sbjct: 538 QVKVLPIS--DKYIK-YGKKVQDTLNKAGIRADIDMRAEKIGYKIREAQMQKIPYMLVVG 594 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +K D V ++ R G S++E I + + + Sbjct: 595 AKEEEDRLVSVRSRFAGDEGQKSMDEFIASITSEIAGKK 633 >gi|15643503|ref|NP_228549.1| threonyl-tRNA synthetase [Thermotoga maritima MSB8] gi|8928373|sp|Q9WZJ9|SYT_THEMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|4981265|gb|AAD35821.1|AE001744_11 threonyl-tRNA synthetase [Thermotoga maritima MSB8] Length = 640 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 85/391 (21%), Positives = 157/391 (40%), Gaps = 41/391 (10%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 +++ G+ +LP G L+ + RE G E+ P + + LW SG +D Y + M Sbjct: 256 EYAPGMPFFLPKGVVVLNELMKFSRELHRERGYQEIFTPLIMNEQLWKISGHWDHYAENM 315 Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 +++++ P + +++S SYR+LP F++ R E G+MR Sbjct: 316 Y-FIEKDEERYAVKPMNCPGHILVYKSRTVSYRDLPLRFFEFGRVHRYERSGVLHGLMRV 374 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD-LSHEFI 211 R F DA+ F TP+ + + I+ + G R E + D + E I Sbjct: 375 RSFTQDDAHIF-CTPDQIEEEILGVLDLINTIYSQFGFT---YRVELSTMPEDHMGDEAI 430 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 T + + + + + F Y D H + DS+ Sbjct: 431 WEKATTALKNALERAGLSYKVNEGEGAF----------------YGPKIDFH---IRDSI 471 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIE 330 + + ++ F K+++ T+ G D K+H M I G++ ++ Sbjct: 472 GREWQCATIQLD----FMMPEKFNV----TYIGPDNKEHRAVMIHRAIYGSLERFFGILI 523 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 G +P +AP ++++I I D EK+ R+S+ G VF+D+ E +G Sbjct: 524 EHFAGA---FPTWLAPIQVAVIPISEKHN---DGAEKVARRISQEGFRVFFDNRRETLGY 577 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + A P +I+G K + K+ ++ R Sbjct: 578 RIRQAQTQKIPYMIIIGDKELESGKISVRTR 608 >gi|240127689|ref|ZP_04740350.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] Length = 648 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/398 (20%), Positives = 152/398 (38%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 266 LQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 326 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 384 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 385 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 441 Query: 209 EFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVH 263 + A+ G E C ++ + +P E + I +++ W V Sbjct: 442 DVWDKAEQGLREALTACGVEWGE--LPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVL 499 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E+L AR + + H +GS R Sbjct: 500 PERLDAEYVTENNDRARPVML-------------------------HRAILGSLE----R 530 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE +H G +W +AP ++ ++NI + D C ++ A+L D Sbjct: 531 FIGILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAADFRAELDL 583 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 584 RNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 621 >gi|324993844|gb|EGC25763.1| threonine--tRNA ligase [Streptococcus sanguinis SK405] gi|324994835|gb|EGC26748.1| threonine--tRNA ligase [Streptococcus sanguinis SK678] gi|325687276|gb|EGD29298.1| threonine--tRNA ligase [Streptococcus sanguinis SK72] gi|325696135|gb|EGD38026.1| threonine--tRNA ligase [Streptococcus sanguinis SK160] gi|327474719|gb|EGF20124.1| threonine--tRNA ligase [Streptococcus sanguinis SK408] Length = 647 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 86/399 (21%), Positives = 159/399 (39%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +++ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYADFNLTEYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + + D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEAHI--DYAWQVAKKLRDKGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K D V ++ Sbjct: 578 VDERNEKMQYKIRASQTSKIPYQLIVGDKEAEDGTVNVR 616 >gi|167771272|ref|ZP_02443325.1| hypothetical protein ANACOL_02630 [Anaerotruncus colihominis DSM 17241] gi|167666523|gb|EDS10653.1| hypothetical protein ANACOL_02630 [Anaerotruncus colihominis DSM 17241] Length = 478 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 80/156 (51%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YFG +S TF+G D K Y S+G+ + R++ A+I + D G+ Sbjct: 225 GKALQSGTSHYFGDGFSRAFGITFQGRDNKPQYPHQTSWGM-STRIIGAIIMTHGDNDGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P ++AP ++ ++ I H + +A + RL V C V DD G +FA ++ Sbjct: 284 VLPPAIAPVQVVVLPIAQHKEGVLEAARAVTERLRGV-CRVKIDDSDNSAGWKFAEYEMK 342 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ +G + ++ + + R + ++L+E+ Sbjct: 343 GVPLRLEMGPRDIAAGQCVVVRRDNREKTVVALDEL 378 >gi|229552552|ref|ZP_04441277.1| threonine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|258539925|ref|YP_003174424.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] gi|229314104|gb|EEN80077.1| threonine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|257151601|emb|CAR90573.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] Length = 657 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 87/386 (22%), Positives = 158/386 (40%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 260 GLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANLDLYKTSGHWDHYREDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALDQVQEEFKKILRLIMDVYEDFNITDYSFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S D + L+ E A Y D+ + +L + Sbjct: 425 PKNTEKYFDDDEMWTRSQSMLKGAMDDLHLDYYEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F +++L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFNL----TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP + LI + ++ + D +I ++ G V DD E++G + Sbjct: 534 KGAFPTW---LAPTQAVLIPV--NNDLHLDYVNRIKRQMQAAGLRVKVDDRNEKMGYKIR 588 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P V+VG K ++D+ V ++ Sbjct: 589 EAQTKKIPYTVVVGDKELNDAAVSVR 614 >gi|55820651|ref|YP_139093.1| threonyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|55822542|ref|YP_140983.1| threonyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] gi|116627458|ref|YP_820077.1| threonyl-tRNA synthetase [Streptococcus thermophilus LMD-9] gi|73919831|sp|Q5M0T3|SYT_STRT1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73919832|sp|Q5M5B9|SYT_STRT2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122267944|sp|Q03LP1|SYT_STRTD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|55736636|gb|AAV60278.1| threonyl-tRNA synthetase 1 [Streptococcus thermophilus LMG 18311] gi|55738527|gb|AAV62168.1| threonyl-tRNA synthetase 1 [Streptococcus thermophilus CNRZ1066] gi|116100735|gb|ABJ65881.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Streptococcus thermophilus LMD-9] gi|312277977|gb|ADQ62634.1| Threonyl-tRNA synthetase ThrS [Streptococcus thermophilus ND03] Length = 648 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 86/399 (21%), Positives = 159/399 (39%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P + S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++ H+ SYR LP +I + R E Sbjct: 314 REDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D ++F + PE + + K+ + ++ L R Sbjct: 374 GLQRVREMSLNDGHTF-VAPEQIEEEFKKILQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTD------FDDIISLNSIVEQWTAPYAATSD 261 + D + + D M EN DD+ E A Y D Sbjct: 422 ---LSYRDPADKHKYFDNDEM-----WENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----HYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAE 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTQKIPYQLIVGDKEMKDGTVNVR 616 >gi|11499201|ref|NP_070438.1| prolyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304] gi|2648947|gb|AAB89637.1| prolyl-tRNA synthetase (proS) [Archaeoglobus fulgidus DSM 4304] Length = 575 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/406 (20%), Positives = 153/406 (37%), Gaps = 72/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+Y W P G K V + +RE +R E+ P L +L E + E+ Sbjct: 134 KGLYVWFPFGFKIRQLVYSKLREIMDREHD-EVYFPALIPETELGKEGEHIKGFEDEVYW 192 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D + PT E M +FR ++++ +LP YQI FR E + ++R Sbjct: 193 ITHGGLTPLDVKLALRPTSETAMYPMFRLWVRNHADLPLKVYQIVNTFRYETKHTRPLIR 252 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE K+A++ E + K Y + L + + +R Sbjct: 253 LREITSFKEAHTVHKDFEEAAEHVKKAIGFYKEFYDFLAIPYMVIR-------------- 298 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ FP + FD I+ Sbjct: 299 -------------RPEWDKFPGAAYTIAFDTIMP-------------------------- 319 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 R +++G + + ++ ++ +G+ +Y YGI R +AA+I Sbjct: 320 -------DGRTLQIGTVHHLADNFARTFDIKYEAPNGEHYYAHQTCYGISE-RCIAALIS 371 Query: 331 SSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 D G++ P VAP +I +I I K ++ +AC K+ +L V D+ ++ Sbjct: 372 VHGDDLGLVLPFEVAPVQIVIIPILYKGKEEAVMEACRKLAEKLK--AFRVVLDEGEDRP 429 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G+++ +L G P++ +G + + R + ++ L+EV Sbjct: 430 GAKYYKWELKGVPIRFEIGPRDAEKGVAVVSFRDEKRKFEVPLDEV 475 >gi|289434839|ref|YP_003464711.1| hypothetical protein lse_1474 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171083|emb|CBH27625.1| thrS [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 640 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 96/445 (21%), Positives = 186/445 (41%), Gaps = 38/445 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K F+ + +E RD +L L T I + +G+ WLP G + I +++ R Sbjct: 228 KEFIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEER 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I Sbjct: 287 LGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ + R E+ G+ R R + DA+ F + P+ K + ++ L Sbjct: 347 SYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVF-VRPDQIKDEFKRVVELIL 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM-DFPIPSENTDFDD 241 ++ +K R LS+ D T+ + D M D + D+ Sbjct: 406 EVYKDFDIKDYSFR---------LSYR-----DPKNTEKYFDDDAMWDKAQAMLKSAMDE 451 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y DV ++ ++ + + +S ++ F ++ L T Sbjct: 452 MGMDYFEADGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----T 500 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG+ H + G+ + R VA +IE KG +P +AP ++ LI + A Sbjct: 501 YIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY---KG-AFPTWLAPVQMELIPVNADAH 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + D + + +L + G V DD E++G + A P +++G + + V ++ Sbjct: 557 L--DYAKGVQDKLQRAGLRVEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMESGTVNVR 614 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + E M L+ I+ S Sbjct: 615 RYGSKDSETMELDTFISQVVQEVSK 639 >gi|199599516|ref|ZP_03212905.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|258508749|ref|YP_003171500.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|199589585|gb|EDY97702.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|257148676|emb|CAR87649.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|259650055|dbj|BAI42217.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus GG] Length = 657 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 87/386 (22%), Positives = 158/386 (40%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 260 GLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANLDLYKTSGHWDHYREDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALDQVQEEFKKILRLIMDVYEDFNITDYSFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S D + L+ E A Y D+ + +L + Sbjct: 425 PKNTEKYFDDDEMWTRSQSMLKGAMDDLHLDYYEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F +++L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFNL----TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP + LI + ++ + D +I ++ G V DD E++G + Sbjct: 534 KGAFPTW---LAPTQAVLIPV--NNDLHLDYVNRIKRQMQAAGLRVKVDDRNEKMGYKIR 588 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P V+VG K ++D+ V ++ Sbjct: 589 EAQTKKIPYTVVVGDKELNDAAVSVR 614 >gi|268686074|ref|ZP_06152936.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|268626358|gb|EEZ58758.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] Length = 637 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 81/396 (20%), Positives = 149/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +D+Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + +R P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVRLSLRPEKRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 431 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAAKLQAADFRAELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q+++G K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRK 610 >gi|313637683|gb|EFS03062.1| threonyl-tRNA synthetase [Listeria seeligeri FSL S4-171] Length = 483 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 96/445 (21%), Positives = 186/445 (41%), Gaps = 38/445 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K F+ + +E RD +L L T I + +G+ WLP G + I +++ R Sbjct: 71 KEFIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEER 129 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I Sbjct: 130 LGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIH 189 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ + R E+ G+ R R + DA+ F + P+ K + ++ L Sbjct: 190 SYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVF-VRPDQIKDEFKRVVELIL 248 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM-DFPIPSENTDFDD 241 ++ +K R LS+ D T+ + D M D + D+ Sbjct: 249 EVYKDFDIKDYSFR---------LSYR-----DPKNTEKYFDDDAMWDKAQAMLKSAMDE 294 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y DV ++ ++ + + +S ++ F ++ L T Sbjct: 295 MGMDYFEADGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----T 343 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG+ H + G+ + R VA +IE KG +P +AP ++ LI + A Sbjct: 344 YIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY---KG-AFPTWLAPVQMELIPVNADAH 399 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + D + + +L + G V DD E++G + A P +++G + + V ++ Sbjct: 400 L--DYAKGVQDKLQRAGLRVEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMESGTVNVR 457 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + E M L+ I+ S Sbjct: 458 RYGSKDSETMELDTFISQVVQEVSK 482 >gi|85057755|ref|YP_456671.1| prolyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] gi|114152170|sp|Q2NJ01|SYP_AYWBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|84789860|gb|ABC65592.1| prolyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] Length = 474 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 80/417 (19%), Positives = 168/417 (40%), Gaps = 72/417 (17%) Query: 25 LMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VE 82 + L+ +I + +KG +LP G +N+ + +TG + P + L+ E Sbjct: 24 ICLKAELIAYSEAKGFIIYLPYGYALWENIQKHLNCTLQKTGHQNVYFPLVFPEKLFHKE 83 Query: 83 SGRYDSYGKEMLRLADRNDK----AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ-- 136 + E + K ++ PT E + + + I SYR+LP + Q Sbjct: 84 KEHIQGFSPEAAMITTTGKKNLSEKLVIRPTSEILFSQYYSKTITSYRDLPKLYNQWCNV 143 Query: 137 LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 +++ +P +R +EFL ++ ++ T + + + +S L I+ +L Sbjct: 144 VRWEKTTKP---FLRGKEFLWQEGHTVHATEQEAM----QQTLSILDIYQKL-------- 188 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 G DL V ET+ F +I+ Y Sbjct: 189 ------GKDLLALPFVCGKKTETEKFAGA----------------LIT-----------Y 215 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 + + +H+ + ++ G Y G ++ F+ D + Y S Sbjct: 216 SIEALMHD--------------GQALQAGTSHYLGIIFAKSFQIQFQDCDNQKKYAHQTS 261 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 +G+ + R++ A+I D +G++ P VAP +I +I ++ D+ + E +++ L K Sbjct: 262 WGV-STRLIGALIMVHSDDEGLVLPPYVAPMQIVIIPLQTQDESVKQVSENLFSILQK-N 319 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 V D + G +F+ +L G PL++ +G + + + +V I R ++++ +++ Sbjct: 320 YRVHLDLQDKTAGWKFSQYELKGVPLRIEIGKRGLENDEVTIFQRYNFAKQNIKIKD 376 >gi|166033170|ref|ZP_02235999.1| hypothetical protein DORFOR_02892 [Dorea formicigenerans ATCC 27755] gi|166027527|gb|EDR46284.1| hypothetical protein DORFOR_02892 [Dorea formicigenerans ATCC 27755] Length = 480 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 86/407 (21%), Positives = 166/407 (40%), Gaps = 70/407 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG ++LP G + + A + TG + +P L A L E+ + + E+ Sbjct: 38 KGCLNYLPNGFAIWELIKADLDRRFKETGVENVYLPCLIPEALLEKEADHIEGFAPEVAW 97 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + +R + PT E + D++ ++SYR+LP + Q L++ RP Sbjct: 98 VTHGGMERLQERFCVRPTSETLFCDLWARTVQSYRDLPKVWNQWCSVLRWEKTTRP---F 154 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +RSREFL ++ ++ T E ++ +M+ Y + F++ + ++P A G HE Sbjct: 155 LRSREFLWQEGHTIHATYEEAEQRTIQMWQIY-KDFYKETM-AVPFVA-----GRKAEHE 207 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 A D ++ +++ A +ATS Sbjct: 208 KFAGA-------------------------QDTYTVEALMHDGKALQSATS--------- 233 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 +FG+ + + D + V S+G+ + R + A+I Sbjct: 234 ------------------HFFGSGFPEAFGIQYIDKDNQLKNVYETSWGL-STRSIGALI 274 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 D G++ P +AP + +I I H + + ++ L K G V DD + G Sbjct: 275 MVHGDDDGLVIPPHLAPVECRVIPIAQHKEGVLEKANELLDELKKAGYRVKIDDSEKSPG 334 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +F+ ++LG P ++ +G K + +++V + R T + +SL+E+ Sbjct: 335 WKFSEQEILGIPTRIEIGPKDIENNQVVVVRRDTREKIVVSLDEITT 381 >gi|323704478|ref|ZP_08116056.1| threonyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535940|gb|EGB25713.1| threonyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 634 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 100/413 (24%), Positives = 163/413 (39%), Gaps = 51/413 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH G + P G + + R+E + G E+ P + + +LW SG +D Y K Sbjct: 254 IHNEGPGFPFFHPKGMILRNILEDFWRKEHAKRGYQEIKTPIILNEELWHRSGHWDHY-K 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D+ P + ++ S + SYR+LP ++ L R EL G+M Sbjct: 313 ENMYFTKIDDEDYAIKPMNCPGALLVYNSTMHSYRDLPLRLCELGLVHRHELSGALHGLM 372 Query: 151 RSREFLMKDAYSFDLTP---EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 R R F DA+ F +TP E K+ + +IF + R E+ IG D Sbjct: 373 RVRSFTQDDAHLF-MTPDQVESEILGVIKLIDYFYKIFGFEYFVELSTRPENS-IGSDED 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT-APYAATSDVHNEK 266 E LA + + I LN V + A Y D H Sbjct: 431 WE---LATNALIKAM------------------EHIGLNYKVNEGDGAFYGPKIDFH--- 466 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMR 323 L DS+ R + G I + +P + + G DG+ H V + G++ Sbjct: 467 LKDSI-------GRTWQCGTI---QLDFQMPERFNCEYVGDDGEKHRPVMLHRVVFGSIE 516 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 A++ + G +P +AP ++ ++ I + I+ RL + V DD Sbjct: 517 RFIAILTENFAGA---FPTWLAPVQVKILPISDKHLAY---AQNIHERLLENDIRVELDD 570 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+IG + A + P +I+G K V V ++ R G SL+E ++ Sbjct: 571 RNEKIGYKIREAQMQKIPYMLILGDKEVEAGNVSVRSRKEGDLGSKSLQEFLS 623 >gi|114152886|sp|O28664|SYP_ARCFU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 471 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/406 (20%), Positives = 154/406 (37%), Gaps = 72/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+Y W P G K V + +RE +R E+ P L +L E + E+ Sbjct: 30 KGLYVWFPFGFKIRQLVYSKLREIMDREHD-EVYFPALIPETELGKEGEHIKGFEDEVYW 88 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D + PT E M +FR ++++ +LP YQI FR E + ++R Sbjct: 89 ITHGGLTPLDVKLALRPTSETAMYPMFRLWVRNHADLPLKVYQIVNTFRYETKHTRPLIR 148 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE K+A++ E + K Y + L + + +R Sbjct: 149 LREITSFKEAHTVHKDFEEAAEHVKKAIGFYKEFYDFLAIPYMVIR-------------- 194 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ FP + FD I+ Sbjct: 195 -------------RPEWDKFPGAAYTIAFDTIMP-------------------------- 215 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 R +++G + + ++ ++ +G+ +Y YGI + R +AA+I Sbjct: 216 -------DGRTLQIGTVHHLADNFARTFDIKYEAPNGEHYYAHQTCYGI-SERCIAALIS 267 Query: 331 SSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 D G++ P VAP +I +I I K ++ +AC K+ +L V D+ ++ Sbjct: 268 VHGDDLGLVLPFEVAPVQIVIIPILYKGKEEAVMEACRKLAEKLK--AFRVVLDEGEDRP 325 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G+++ +L G P++ +G + + R + ++ L+EV Sbjct: 326 GAKYYKWELKGVPIRFEIGPRDAEKGVAVVSFRDEKRKFEVPLDEV 371 >gi|254804601|ref|YP_003082822.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha14] gi|254668143|emb|CBA04768.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha14] Length = 637 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 149/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +++Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVAVKLSLRPEQRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 E A+ G + +P E + I +++ W V E Sbjct: 431 EVWDKAEQGLRDALTACGVEWEELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQLVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|75812508|ref|YP_320127.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Anabaena variabilis ATCC 29413] gi|75705264|gb|ABA24938.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Anabaena variabilis ATCC 29413] Length = 614 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 92/420 (21%), Positives = 170/420 (40%), Gaps = 50/420 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+ +G + P + + DLW SG +D Y + M Sbjct: 237 GLVFWHPKGAIIRYIIEDYWRKSHLESGYQLLYTPHIANLDLWKTSGHFDFYQENMFDSM 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D ++A P + ++ + SYR LP + ++ +R E G+MR R F Sbjct: 297 DVENQAYQIKPMNCPFHVLTYKHQLHSYRELPLRWAELGTVYRYERSGALHGLMRVRGFT 356 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F L + + + ++ +I G K+ + + P + E LA + Sbjct: 357 QDDAHVFCLPNQIADEILGVLNLTE-QILSDFGFKNYEVNLSTRPEKSVGNDEVWELATS 415 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENK 275 Q +K + N IV E A Y D+ K+ D++ Sbjct: 416 ALRQALNTKGW------------------NYIVDEGGGAFYGPKIDI---KIQDAIGRLW 454 Query: 276 RVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESS 332 + S ++ ++LP + DG M I G++ ++ + Sbjct: 455 QCSTIQVD----------FNLPERFDMEYIAVDGSRQRPIMIHRAIFGSLERFFGILIEN 504 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 + G +W +AP ++ L+ + D+V R+ + + L K G V D GE++G Q Sbjct: 505 YSGDFPLW---LAPVQLRLLPVS--DEV-REYAQLVVISLKKAGIRVETDSSGERLGKQI 558 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS---NNRPVL 449 A+L P+ +VG K V + + ++ R +G ++++E++ HR N++ VL Sbjct: 559 RTAELEKIPVVAVVGKKEVENQNLSVRTRQSGDLGVLNMDEIL----HRLQDAINSKSVL 614 >gi|313633110|gb|EFS00008.1| threonyl-tRNA synthetase [Listeria seeligeri FSL N1-067] Length = 485 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 96/445 (21%), Positives = 186/445 (41%), Gaps = 38/445 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K F+ + +E RD +L L T I + +G+ WLP G + I +++ R Sbjct: 73 KEFIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEER 131 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I Sbjct: 132 LGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIH 191 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ + R E+ G+ R R + DA+ F + P+ K + ++ L Sbjct: 192 SYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVF-VRPDQIKDEFKRVVELIL 250 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM-DFPIPSENTDFDD 241 ++ +K R LS+ D T+ + D M D + D+ Sbjct: 251 EVYKDFDIKDYSFR---------LSYR-----DPKNTEKYFDDDAMWDKAQAMLKSAMDE 296 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y DV ++ ++ + + +S ++ F ++ L T Sbjct: 297 MGMDYFEADGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----T 345 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG+ H + G+ + R VA +IE KG +P +AP ++ LI + A Sbjct: 346 YIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY---KG-AFPTWLAPVQMELIPVNADAH 401 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + D + + +L + G V DD E++G + A P +++G + + V ++ Sbjct: 402 L--DYAKGVQDKLQRAGLRVEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMESGTVNVR 459 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + E M L+ I+ S Sbjct: 460 RYGSKDSETMELDTFISQVVQEVSK 484 >gi|228993303|ref|ZP_04153219.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|228766371|gb|EEM15014.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 643 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 96/424 (22%), Positives = 175/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 227 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 286 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 287 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 346 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 347 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 405 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M S + Sbjct: 406 NLTLEVYKDFGLENYSFR---------LSYR-----DPEDTKKYYADDEMWEKAQSMLKE 451 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 452 AMDEMGLEYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 503 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DGK H + G+ + R VA +IE KG +P +AP ++ +I + Sbjct: 504 ---TYVGEDGKPHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVQVIPVS 556 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 557 P--QVHLDYAKKVQEDLQRAGIRVEVDTREEKIGYKIREAQMQKIPYMLVVGDNEVAENG 614 Query: 416 VEIK 419 V ++ Sbjct: 615 VNVR 618 >gi|120611523|ref|YP_971201.1| threonyl-tRNA synthetase [Acidovorax citrulli AAC00-1] gi|166223312|sp|A1TR39|SYT_ACIAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120589987|gb|ABM33427.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidovorax citrulli AAC00-1] Length = 639 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 88/388 (22%), Positives = 153/388 (39%), Gaps = 50/388 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I +HS G W P G V +R+ G E+ P + LW ++G +D Y + Sbjct: 255 IDEHSPGTVFWHPKGWTIWQGVEQYMRQVYRDNGYQEVKGPQILDKHLWEKTGHWDKYRE 314 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M ++++D A+ P + IF +KSYR+LP + + R+E G+ Sbjct: 315 NMFTTESEKHDYAL--KPMNCPGHILIFNQGVKSYRDLPLRYGEFGQCHRNEPTGGLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGD 205 MR R F D + F + + N F + L +++ G I + + P IG + Sbjct: 373 MRVRAFTQDDGHIFCTEDQIQQECIN--FTALLQKVYKDFGFTDIIYKVATRPEKRIGSE 430 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 S D E + S + + D+ + + + Sbjct: 431 ES------WDKAENALIES-------LKASGCDYQIAVGDGAF--------------YGP 463 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAM 322 KL +L + R + G I S+P + A + G DG+ H + + +G++ Sbjct: 464 KLEYTL---RDAIGRHWQCGTI---QVDPSMPERLGAEYVGEDGQRHRPIVLHRAIVGSL 517 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFW 381 ++ H G +W +AP +++++NI A D CR+ K+ L G V Sbjct: 518 ERFIGILIEQHAGALPVW---LAPVQVAVLNITGAQDDYCREIAAKLQKALPNQGLRVEL 574 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSK 409 D E+I + L P ++VG K Sbjct: 575 DLRNEKITYKIREHSLQKLPYILVVGDK 602 >gi|322389968|ref|ZP_08063508.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 903] gi|321143404|gb|EFX38842.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 903] Length = 647 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 167/415 (40%), Gaps = 46/415 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P + S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++ H+ SYR LP +I + R E Sbjct: 314 REDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D ++F + PE + + K+ + ++ L R LS Sbjct: 374 GLQRVREMSLNDGHTF-VAPEQIEEEFKKILQLIIDVYEDFNLTDYRFR---------LS 423 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTD------FDDIISLNSIVEQWTAPYAATSD 261 + D + + D M EN DD+ E A Y D Sbjct: 424 YR-----DPEDKHKYFDNDEM-----WENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----HYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ E++ + + P Q+IVG K + D V ++ E MS++ + Sbjct: 578 VDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDKAVNVRRYGQKETETMSVDAFV 632 >gi|312868227|ref|ZP_07728427.1| threonine--tRNA ligase [Streptococcus parasanguinis F0405] gi|311095972|gb|EFQ54216.1| threonine--tRNA ligase [Streptococcus parasanguinis F0405] Length = 647 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 167/415 (40%), Gaps = 46/415 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P + S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++ H+ SYR LP +I + R E Sbjct: 314 REDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D ++F + PE + + K+ + ++ L R LS Sbjct: 374 GLQRVREMSLNDGHTF-VAPEQIEEEFKKILQLIIDVYEDFNLTDYRFR---------LS 423 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTD------FDDIISLNSIVEQWTAPYAATSD 261 + D + + D M EN DD+ E A Y D Sbjct: 424 YR-----DPEDKHKYFDNDEM-----WENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----HYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ E++ + + P Q+IVG K + D V ++ E MS++ + Sbjct: 578 VDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDKAVNVRRYGQKETETMSVDAFV 632 >gi|228999356|ref|ZP_04158935.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|229006911|ref|ZP_04164541.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228754311|gb|EEM03726.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228760301|gb|EEM09268.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17] Length = 643 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 96/424 (22%), Positives = 175/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 227 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 286 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 287 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 346 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 347 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 405 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M S + Sbjct: 406 NLTLEVYKDFGLENYSFR---------LSYR-----DPEDTKKYYADDEMWEKAQSMLKE 451 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 452 AMDEMGLEYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 503 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DGK H + G+ + R VA +IE KG +P +AP ++ +I + Sbjct: 504 ---TYVGEDGKPHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVQVIPVS 556 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 557 P--QVHLDYAKKVQEDLQRAGIRVEVDTREEKIGYKIREAQMQKIPYMLVVGDNEVAENG 614 Query: 416 VEIK 419 V ++ Sbjct: 615 VNVR 618 >gi|282881717|ref|ZP_06290380.1| threonine--tRNA ligase [Prevotella timonensis CRIS 5C-B1] gi|281304476|gb|EFA96573.1| threonine--tRNA ligase [Prevotella timonensis CRIS 5C-B1] Length = 655 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 93/418 (22%), Positives = 156/418 (37%), Gaps = 65/418 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R Q R G E+ P + S +L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTELRLRLQDMLRNIQRRYGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + ++F +SY++LP + +R E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEVFAYKPRSYKDLPLRIAEFGTVYRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K+ + ++ +F + + I L Sbjct: 383 SFTQDDAHIF-CRPDQVKNEFLRVMDIIQAVFKIFNFDNFEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D E W A D EK D+ E Sbjct: 428 RDPKDKEKYIGSD-----------------------EVWAESEQAIIDACKEKGLDAKVE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLPMSATFKGAD---GKDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 YGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFKLEYTDEDNSKRTPVMVHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ AV+ G +W PD VA IS + ++ R ++ A+ + Sbjct: 525 GSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS----EKYNAYARQVAKQFAAQQVRATI 580 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E+IG + +L P VIVG K +D V ++ R G + + ++E I Sbjct: 581 ----DDRNEKIGRKIRDNELKRVPYMVIVGEKEAADGLVSMRERGGGEQATLRVDEFI 634 >gi|289548737|ref|YP_003473725.1| threonyl-tRNA synthetase [Thermocrinis albus DSM 14484] gi|289182354|gb|ADC89598.1| threonyl-tRNA synthetase [Thermocrinis albus DSM 14484] Length = 645 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 91/411 (22%), Positives = 163/411 (39%), Gaps = 55/411 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + REE + G + P + +A LW +SG D Y + M Sbjct: 263 GLVIWLPKGGIYRKVLEDYWREEHLKRGYQLVYTPHIGNAKLWQKSGHLDHYRQNMFPPM 322 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + D+ P + I++S ++SYR+LPF ++ +R E+ G+MR R F Sbjct: 323 ELEDEEYFVKPMNCPFHIAIYKSKVRSYRDLPFRLAELGTVYRYEMSGVLHGLMRVRGFT 382 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ P+ + + + G + + P IG D E Sbjct: 383 QDDAHII-CRPDQVDDVIQETLDFAISMLRDFGFDEFKVYISTKPEDAIGSDEQWE---- 437 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 ++ + + S +++ I E A Y DV K+ D+L Sbjct: 438 ---------KAESALKKAVESMGLEYE-------IDEGGGAFYGPKIDV---KIRDAL-- 476 Query: 274 NKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 G ++ T ++LP + G D + H M I G++ Sbjct: 477 -----------GRLWQCSTIQFDFNLPERFDMEYVGPDNRRHRPYMIHRAILGSIERFTG 525 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 V+ H G W +AP ++ ++ ++ H + R L + G V D+ E Sbjct: 526 VLLEHHAGLLPFW---LAPVQVRVLPVQERHVEYARSVANT----LREEGFRVEVDERDE 578 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++G++ A+L P +IVG K + D V ++ + G MSL++++++ Sbjct: 579 RLGAKIRDAELQKIPYVLIVGDKEMQDGSVSVRGKREGDLGKMSLQDLLSF 629 >gi|222152709|ref|YP_002561885.1| threonyl-tRNA synthetase [Streptococcus uberis 0140J] gi|254783540|sp|B9DU13|SYT_STRU0 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|222113521|emb|CAR41303.1| threonyl-tRNA synthetase [Streptococcus uberis 0140J] Length = 648 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 90/416 (21%), Positives = 168/416 (40%), Gaps = 46/416 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++H+ SYR LP ++ + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELPIRIAELGMMHRYEKSGALS 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 374 GLQRVREMTLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR---------LS 423 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + D +T+ + D M EN +L+ + E A Y D Sbjct: 424 YR-----DPKDTEKYYDNDEM-----WENAQSMLKAALDEMGVEYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 523 TMERFTAILIETYKGAFPTW---LAPHQVTVIPISNEAHI--DYAWEVAKALRDRGIRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DD E++ + + P Q+IVG K + D V ++ + SL E ++ Sbjct: 578 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESLSEFMD 633 >gi|308509394|ref|XP_003116880.1| CRE-TARS-1 protein [Caenorhabditis remanei] gi|308241794|gb|EFO85746.1| CRE-TARS-1 protein [Caenorhabditis remanei] Length = 749 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 86/417 (20%), Positives = 170/417 (40%), Gaps = 55/417 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G W P G + + IR++ R G E+ P + + LW SG + Y Sbjct: 357 FFHPLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNMYNKKLWETSGHWQHYS 416 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 ++M ++ ++ + P + +F +Y LPF F + R+E+ G+ Sbjct: 417 EDMFKIEVEKEEFGL-KPMNCPGHCLMFGHMPHTYNELPFRFADFGVLHRNEMSGALTGL 475 Query: 150 MRSREFLMKDAYSF---DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 R R F DA+ F D E K + + +Y ++F ++ R E Sbjct: 476 TRVRRFQQDDAHIFCRKDQIAEEIKQCLDFLEYAYEKVFGFTFKLNLSTRPEG------- 528 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATS 260 F+ GE + + + D +LN+ +W A Y Sbjct: 529 ---FL-----GEIETW------------NQAEADLTEALNATGRKWALNPGDGAFYGPKI 568 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 D+ + D+L N + + ++ F ++ L + F K V + +G Sbjct: 569 DI---TIQDALKRNFQCATIQLD----FQLPNQFDL---SYFDEKGEKQRPVMIHRAVLG 618 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ + A++ S+ GK WP ++P + +I + H+ V RD + ++ + G +V Sbjct: 619 SVERMTAILTESYGGK---WPFWLSPRQCKIITV--HESV-RDYASDVKKKIFEAGFEVE 672 Query: 381 WD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +D G+ + Q + L F +++G+K + V ++ R +R ++ LE++++ Sbjct: 673 YDATCGDTMNKQVRNSQLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVPLEKLLS 729 >gi|169831543|ref|YP_001717525.1| threonyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] gi|169638387|gb|ACA59893.1| threonyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 635 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 90/405 (22%), Positives = 154/405 (38%), Gaps = 46/405 (11%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ G + P G + + REE + G +E+ P + +LW SG +D Y +E Sbjct: 255 HEAGPGFPFFHPRGMVLRNELERFWREEHTKNGYLEIRTPIILRQELWERSGHWDHY-RE 313 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + +D+ P + ++RS + SYR LP ++ L R EL G+MR Sbjct: 314 NMYFTTIDDEKYAVKPMNCPGGILVYRSKLHSYRELPIRLGELGLVHRHELSGVLHGLMR 373 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 +R F DA+ F PE + ++ + F+R ++ Sbjct: 374 ARCFTQDDAHIF-CRPEQVEEEIVRI-MDLTEYFYR----------------QVFGFDYH 415 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 V T + S + + + ++ + E A Y D H L D L Sbjct: 416 VELSTRPEKSLGSDEIWESATAALRRALEERAVNYKVNEGDGAFYGPKVDFH---LRDCL 472 Query: 272 PENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 R + G I F K+ L + G DG+ H M I G+M A Sbjct: 473 -------GRTWQCGTIQVDFQMPEKFEL----EYVGEDGQRHRPVMIHRVIYGSMERFIA 521 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ G +W +AP ++ ++ I H ++ E L + G +D E Sbjct: 522 ILTEHFAGAFPVW---LAPVQVRILPITDRHAAYAQEVTEA----LLRAGVRAEFDGRNE 574 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 ++G + A +L P +++G + V ++HR G M L Sbjct: 575 KVGYKIREAQVLKVPYMLVIGDREAESRTVAVRHRTAGDLGSMEL 619 >gi|239827997|ref|YP_002950621.1| threonyl-tRNA synthetase [Geobacillus sp. WCH70] gi|259516491|sp|C5D639|SYT_GEOSW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239808290|gb|ACS25355.1| threonyl-tRNA synthetase [Geobacillus sp. WCH70] Length = 644 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 93/403 (23%), Positives = 170/403 (42%), Gaps = 36/403 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S +L+ SG +D Y M Sbjct: 264 QGLPLWLPKGATIRRIIERYIVDKEIELGYQHVYTPVLGSVELYKTSGHWDHYKDNMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I++S I SYR LP ++ R E+ G+ R R Sbjct: 324 MEMDNEQLVLRPMNCPHHMMIYKSKIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ L ++ GL R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKDEFKRVVNLILEVYKDFGLDEYSFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M + + D + L E A Y DV ++ +L ++ Sbjct: 429 PHDKEKYYDDDEMWEKAQNMLREAMDELGLEYYEAEGEAAFYGPKLDV---QVRTALGKD 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPERFDL----TYIGEDGKPHRPVVIHRGVVSTMERFVAFLIEEY 537 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ +I + + D K+ L G V D+ E+IG + Sbjct: 538 ---KG-AFPTWLAPVQVEVIPVSPAAHL--DYAYKVKEALQSQGFRVEVDERDEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P ++VG K ++++ V ++ E MSL++ I Sbjct: 592 REAQIQKIPYMLVVGDKEMAENAVNVRKYGEQKSETMSLDDFI 634 >gi|150006539|ref|YP_001301283.1| threonyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|319642944|ref|ZP_07997580.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_40A] gi|166223322|sp|A6L7J7|SYT_BACV8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|149934963|gb|ABR41661.1| threonyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|317385492|gb|EFV66435.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_40A] Length = 646 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 98/440 (22%), Positives = 167/440 (37%), Gaps = 70/440 (15%) Query: 25 LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESG 84 L + T M+ KG+ WLP G + +R Q R E+ P + + +L++ SG Sbjct: 252 LFMFTDMV---GKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIGNKNLYITSG 308 Query: 85 RYDSYGKEMLRLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 Y YGK+ + ++ Y P + I+++ +SY++LP + R E Sbjct: 309 HYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRIAEFGTVCRYE 368 Query: 143 LRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 G+ R R F DA+ F P+ K + ++ +F + +++ + Sbjct: 369 QSGELHGLTRVRSFTQDDAHLF-CRPDQVKEEFLRVMDIINIVFKSMNFENVEAQ----- 422 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD 261 I L D + + D E W A + Sbjct: 423 ---------ISLRDKVNREKYIGSD-----------------------ENWEKAEQAIIE 450 Query: 262 VHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGK 308 EK + E + G + +G + GT Y+LP + G+D + Sbjct: 451 ACEEKGLTAKVEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQ 510 Query: 309 DHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDA 364 H V + G+M R VA +IE + GK +W PD VA IS + + Sbjct: 511 KHRPVMIHRAPFGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNEY 561 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ A L K DD E+IG + ++ P +IVG K + +V ++ + G Sbjct: 562 AEQVKAELRKFDVRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVRKQGEG 621 Query: 425 IREDMSLEEVINYASHRFSN 444 + M +EE + SN Sbjct: 622 DKGTMKIEEFGKNLAEEVSN 641 >gi|291549825|emb|CBL26087.1| prolyl-tRNA synthetase, family I [Ruminococcus torques L2-14] Length = 478 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 85/405 (20%), Positives = 164/405 (40%), Gaps = 70/405 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG ++LP G +N+ + TG + +P + + L E + + E+ Sbjct: 36 KGCMNYLPNGYALWENIQKNLDARFKETGVENVYLPVMIPESLLQKEKDHIEGFAPEVAW 95 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + + + PT E + D++ ++SYR+LP + Q L++ RP Sbjct: 96 VTHGGLEELQERFCIRPTSETLFCDVWSKTVQSYRDLPKVWNQWCSVLRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +RSREFL ++ ++ T E ++ +M+ Y R F + L +IP Sbjct: 153 LRSREFLWQEGHTIHATYEEAEERTKQMWRVY-RDFAQDVL-AIP--------------- 195 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 +V E++ F D ++ +++ A +ATS Sbjct: 196 -VVSGRKTESEKFAGA--------------QDTYTIEALMHDGKALQSATS--------- 231 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 H F G+ + + + + H V S+G+ + R++ A+I Sbjct: 232 ----------------HFF--GSSFPSAFGIQYSDKNNELHEVYETSWGL-STRIIGALI 272 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 D G++ P +AP + +I I H + D ++ L G V DD + G Sbjct: 273 MVHGDDSGLVIPPRIAPVQTMIIPIAQHKEGVLDKANELVDTLKAAGYKVKIDDSDKAPG 332 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +F+ ++LG P ++ +G K + +++ I R T + +SL+E+ Sbjct: 333 WKFSGQEILGIPTRIEIGPKDIENNQAVIVRRDTREKIVVSLDEL 377 >gi|41615004|ref|NP_963502.1| prolyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M] gi|74580044|sp|Q74ND5|SYP_NANEQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|40068728|gb|AAR39063.1| NEQ210 [Nanoarchaeum equitans Kin4-M] Length = 537 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 102/421 (24%), Positives = 170/421 (40%), Gaps = 34/421 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG+ + P G KA + +++ + GA P + ++ ES + +E+ Sbjct: 29 KGMPVYKPYGYKAFKFLMSLLENKLESIGAEPAWFPIVIPYSIFKKESEHIKGFEEEVFW 88 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D+ + +I PT E M +F I+SYR+LP Y +R E + ++R Sbjct: 89 IERAGNDKLEDPLILRPTSETEMYYMFAKWIESYRDLPLIIYMTNTVYRYETKSTKALIR 148 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR-LGLKSIPMRA---ESGPIGGDLS 207 RE L + +S + E ++ K Y IF L L I +R + P G + Sbjct: 149 GREVLWNETHSVHRSEEDAREHMAKAKEVYDYIFWDVLYLPYIWVRRPEWDKFPGGEETY 208 Query: 208 HEFIVLAD-----TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD- 261 ++ D G + K F IP E D + +++ P D Sbjct: 209 AADAIMPDGRFLQVGTIHLLGQK----FAIPFEIKFLD----YHPFYKKYGDPNIYIKDK 260 Query: 262 ------VHNEKLF-DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 VH K F + L + K I++G Y + ++ K D + YV Sbjct: 261 NGNEYKVHAPKEFWEELEKGKLTKTYTIKIGDKEYTISSIE-EINEKLKEYDFR-KYVWQ 318 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 SYGI +MR + D G++ P +AP +I +I I D K L K Sbjct: 319 TSYGI-SMRAFGGALYWLGDDLGLVMPYKIAPIQIVIIPILGKDDTKVIEYSKKVYELIK 377 Query: 375 VGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 V+ D D + G ++ DL+G PL++ +G K V ++ + I R + +SL E Sbjct: 378 DKYRVYLDSDDTKTPGYKYYYYDLIGVPLRIDIGLKEVENNSITIVRRDNKKKYTISLNE 437 Query: 434 V 434 + Sbjct: 438 L 438 >gi|301066747|ref|YP_003788770.1| threonyl-tRNA synthetase [Lactobacillus casei str. Zhang] gi|300439154|gb|ADK18920.1| Threonyl-tRNA synthetase [Lactobacillus casei str. Zhang] Length = 657 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 87/386 (22%), Positives = 158/386 (40%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 260 GLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANLDLYKTSGHWDHYREDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALDQVQEEFKKILRLIMDVYEDFNITDYSFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S D + L+ E A Y D+ + +L + Sbjct: 425 PKNTEKYFDDDEMWTRSQSMLKGAMDDLKLDYYEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F +++L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFNL----TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP + LI + ++ + D +I ++ G V DD E++G + Sbjct: 534 KGAFPTW---LAPTQAVLIPV--NNDLHLDYVNRIKKQMLAAGLRVKVDDRNEKMGYKIR 588 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P V+VG K ++D+ V ++ Sbjct: 589 EAQTKKIPYTVVVGDKELNDAAVSVR 614 >gi|191638692|ref|YP_001987858.1| threonyl-tRNA synthetase [Lactobacillus casei BL23] gi|239632065|ref|ZP_04675096.1| ser-tRNA(Thr) hydrolase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|238693055|sp|B3WF49|SYT_LACCB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|190712994|emb|CAQ67000.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Lactobacillus casei BL23] gi|239526530|gb|EEQ65531.1| ser-tRNA(Thr) hydrolase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327382733|gb|AEA54209.1| Threonyl-tRNA synthetase [Lactobacillus casei LC2W] gi|327385920|gb|AEA57394.1| Threonyl-tRNA synthetase [Lactobacillus casei BD-II] Length = 657 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 87/386 (22%), Positives = 158/386 (40%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 260 GLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANLDLYKTSGHWDHYREDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALDQVQEEFKKILRLIMDVYEDFNITDYSFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S D + L+ E A Y D+ + +L + Sbjct: 425 PKNTEKYFDDDEMWTRSQSMLKGAMDDLKLDYYEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F +++L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFNL----TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP + LI + ++ + D +I ++ G V DD E++G + Sbjct: 534 KGAFPTW---LAPTQAVLIPV--NNDLHLDYVNRIKKQMLAAGLRVKVDDRNEKMGYKIR 588 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P V+VG K ++D+ V ++ Sbjct: 589 EAQTKKIPYTVVVGDKELNDAAVSVR 614 >gi|166365884|ref|YP_001658157.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843] gi|166088257|dbj|BAG02965.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843] Length = 599 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 93/428 (21%), Positives = 169/428 (39%), Gaps = 64/428 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML-RL 96 G+ W P G + +++EQ + G + + P + DL+ SG + Y ++M + Sbjct: 213 GLPLWTPKGTLIRSLLEDFLKKEQLKRGYLPVVTPHIARVDLFKISGHWQKYKEDMFPMM 272 Query: 97 ADRNDKA-----MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 AD + A + P + I++S ++SYR LP + +R E G+ Sbjct: 273 ADDEESAGKEIGFVLKPMNCPFHIQIYKSDLRSYRELPMRLAEFGTVYRYEQSGELGGLT 332 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-----AESGP-IGG 204 R R F + D++ F +TPE + + L +F L LK+ R ES IG Sbjct: 333 RVRGFTVDDSHLF-VTPEQLDKEFLSVVDLILTVFKSLQLKNFKARLSFRDPESDKYIGS 391 Query: 205 DLSHEFIVLADTGETQVFCSKDFMD-FPIPSENTDFD---DIISLNSIVEQWTAPYAATS 260 D + E A Q MD F P E + D I +++ +W Sbjct: 392 DEAWEKAQSAIRKAVQTLG----MDYFEAPGEAAFYGPKLDFIFQDALEREW-------- 439 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSY 317 ++G + Y+LP + DG + V + Sbjct: 440 ----------------------QLGTV---QVDYNLPERFELEYVAEDGNRKRPVMIHRA 474 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ + ++ + G +W +AP +I L+ + D +++ A++ +G Sbjct: 475 PFGSLERLIGILIEEYAGDFPLW---LAPVQIRLLPV---SDTQLDYAKEVTAKMQLLGI 528 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D GE++G A+ P+ +VG+K + + + I+ R TG +S+EEV+ Sbjct: 529 RAETDTSGERLGKMIRNAETAKIPVMAVVGAKEMESNSLSIRTRATGDLGVISVEEVVAK 588 Query: 438 ASHRFSNN 445 N+ Sbjct: 589 LESAIQNH 596 >gi|56421254|ref|YP_148572.1| threonyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|297529120|ref|YP_003670395.1| threonyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|73919792|sp|Q5KWD2|SYT_GEOKA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56381096|dbj|BAD77004.1| threonyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|297252372|gb|ADI25818.1| threonyl-tRNA synthetase [Geobacillus sp. C56-T3] Length = 652 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 101/436 (23%), Positives = 184/436 (42%), Gaps = 44/436 (10%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T Q +G+ WLP G + I +++ G Sbjct: 234 YLRLLEEAKERDHRKLGKELELFTTS-QQVGQGLPLWLPKGATIRRIIERYIVDKEVALG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L S +L+ SG +D Y + M + +++ ++ P + I++S + SY Sbjct: 293 YDHVYTPVLGSVELYKTSGHWDHYKENMFPPMEMDNEELVLRPMNCPHHMMIYKSKLHSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ R E+ G+ R R + DA+ F + P+ K + ++ L + Sbjct: 353 RELPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIF-VRPDQIKDEFKRVVNLILEV 411 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G++ R LS+ D + + + D M + D + Sbjct: 412 YKDFGIEEYSFR---------LSYR-----DPHDKEKYYDDDEMWEKAQRMLREAMDELG 457 Query: 245 LNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 L+ E A Y DV ++ +L +++ +S ++ F ++ L T+ Sbjct: 458 LDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFDL----TYI 506 Query: 304 GADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DGK H + G+ + R VA +IE KG +P +AP ++ +I + + Sbjct: 507 GEDGKPHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVKVIPVSPEAHL- 561 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH- 420 D + L + G V D+ E+IG + A + P ++VG K VS+ V ++ Sbjct: 562 -DYAYDVQRTLKERGFRVEVDERDEKIGYKIREAQMQKIPYMLVVGDKEVSERAVNVRRY 620 Query: 421 -----RLTGIREDMSL 431 R G+ E M+L Sbjct: 621 GEKESRTMGLDEFMAL 636 >gi|15615703|ref|NP_244007.1| threonyl-tRNA synthetase 1 [Bacillus halodurans C-125] gi|20139931|sp|Q9K866|SYT_BACHD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|10175763|dbj|BAB06860.1| threonyl-tRNA synthetase 1 [Bacillus halodurans C-125] Length = 645 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 88/409 (21%), Positives = 175/409 (42%), Gaps = 40/409 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ + G + P L S++L+ SG +D Y +M Sbjct: 266 QGLPLWLPKGATIRRIIERYIVDKEEKLGYQHVYTPVLASSELYKTSGHWDHYKDDMFPT 325 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ ++ P + ++++ ++SYR LP ++ L R E+ G+ R R Sbjct: 326 MEMENEELVLRPMNCPHHMMVYKTEMRSYRQLPLRIAELGLMHRYEMSGAVSGLQRVRGM 385 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F P+ K + ++ ++ GLK+ R LS+ D Sbjct: 386 TLNDAHIF-CRPDQIKDEFVRVVRLIQAVYEDFGLKNYSFR---------LSYR-----D 430 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M + D + L E A Y DV ++ +L ++ Sbjct: 431 PEDKEKYFDDDNMWNKAQGMLKEAMDELELEYFEAEGEAAFYGPKLDV---QVRTALGKD 487 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DG+ H + G+ + R VA ++E Sbjct: 488 ETLSTVQLD----FLLPERFDL----TYVGEDGQPHRPVVVHRGVVSTMERFVAFLLEEY 539 Query: 333 HDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ +I + +AH + ++ E L + G V D+ E+IG Sbjct: 540 ---KG-AFPTWLAPVQVQVIPVSPEAHLEYAKNVQET----LQQAGIRVEIDERDEKIGY 591 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 + A + P +++G K V + V ++ M L+E + + + Sbjct: 592 KIREAQMQKIPYMLVLGDKEVEANGVNVRKYGEKDSSSMGLDEFVRHVA 640 >gi|261418266|ref|YP_003251948.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|319767774|ref|YP_004133275.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC52] gi|261374723|gb|ACX77466.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|317112640|gb|ADU95132.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC52] Length = 652 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 101/436 (23%), Positives = 184/436 (42%), Gaps = 44/436 (10%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T Q +G+ WLP G + I +++ G Sbjct: 234 YLRLLEEAKERDHRKLGKELELFTTS-QQVGQGLPLWLPKGATIRRIIERYIVDKEVALG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L S +L+ SG +D Y + M + +++ ++ P + I++S + SY Sbjct: 293 YDHVYTPVLGSVELYKTSGHWDHYKENMFPPMEMDNEELVLRPMNCPHHMMIYKSKLHSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ R E+ G+ R R + DA+ F + P+ K + ++ L + Sbjct: 353 RELPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIF-VRPDQIKDEFKRVVNLILEV 411 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G++ R LS+ D + + + D M + D + Sbjct: 412 YKDFGIEEYSFR---------LSYR-----DPHDKEKYYDDDEMWEKAQRMLREAMDELG 457 Query: 245 LNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 L+ E A Y DV ++ +L +++ +S ++ F ++ L T+ Sbjct: 458 LDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFDL----TYI 506 Query: 304 GADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DGK H + G+ + R VA +IE KG +P +AP ++ +I + + Sbjct: 507 GEDGKPHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVKVIPVSPEAHL- 561 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH- 420 D + L + G V D+ E+IG + A + P ++VG K VS+ V ++ Sbjct: 562 -DYAYDVQRTLKERGFRVEVDERDEKIGYKIREAQMQKIPYMLVVGDKEVSERAVNVRRY 620 Query: 421 -----RLTGIREDMSL 431 R G+ E M+L Sbjct: 621 GEKESRTMGLDEFMAL 636 >gi|254881560|ref|ZP_05254270.1| threonyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294778842|ref|ZP_06744259.1| threonine--tRNA ligase [Bacteroides vulgatus PC510] gi|254834353|gb|EET14662.1| threonyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294447295|gb|EFG15878.1| threonine--tRNA ligase [Bacteroides vulgatus PC510] Length = 646 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 98/440 (22%), Positives = 167/440 (37%), Gaps = 70/440 (15%) Query: 25 LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESG 84 L + T M+ KG+ WLP G + +R Q R E+ P + + +L++ SG Sbjct: 252 LFMFTDMV---GKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIGNKNLYITSG 308 Query: 85 RYDSYGKEMLRLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 Y YGK+ + ++ Y P + I+++ +SY++LP + R E Sbjct: 309 HYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRIAEFGTVCRYE 368 Query: 143 LRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 G+ R R F DA+ F P+ K + ++ +F + +++ + Sbjct: 369 QSGELHGLTRVRSFTQDDAHLF-CRPDQVKEEFLRVMDIINIVFKSMNFENVEAQ----- 422 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD 261 I L D + + D E W A + Sbjct: 423 ---------ISLRDKVNREKYIGSD-----------------------ENWEKAEQAIIE 450 Query: 262 VHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGK 308 EK + E + G + +G + GT Y+LP + G+D + Sbjct: 451 ACEEKGLTAKVEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQ 510 Query: 309 DHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDA 364 H V + G+M R VA +IE + GK +W PD VA IS + + Sbjct: 511 KHRPVMIHRAPFGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNEY 561 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ A L K DD E+IG + ++ P +IVG K + +V ++ + G Sbjct: 562 AEQVKAELRKFDVRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVRKQGEG 621 Query: 425 IREDMSLEEVINYASHRFSN 444 + M +EE + SN Sbjct: 622 DKGTMKIEEFGKNLAEEVSN 641 >gi|228472826|ref|ZP_04057584.1| threonine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] gi|228275877|gb|EEK14643.1| threonine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] Length = 649 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 94/431 (21%), Positives = 168/431 (38%), Gaps = 63/431 (14%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T ++ +G+ WLP G + + A +R+ Q + G Sbjct: 230 YLTLLEEAKKRDHRKLGKELELFT-FSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR-LADRND-KAMIYGPTHEEVMTDIFRSHIK 123 ++ P + +L+V SG ++ YGK+ + +A N+ + + P + +I+ SH Sbjct: 289 YEQVVTPHIGHKNLYVTSGHWEKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNSHPW 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP F + +R E G+ R R F DA+ F TPE + + L Sbjct: 349 SYKDLPKRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIF-CTPEQLDAEFKHVIDLVL 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F LG + + + L D + D Sbjct: 408 YVFGSLGFDNFTAQ--------------VSLRDPENLSKYIGTD---------------- 437 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT-- 292 E W A + EK + E + G + +G + GT Sbjct: 438 -------ENWAKAENAIINAAKEKNLTYVIETGEAAFYGPKLDFMVKDALGRSWQLGTIQ 490 Query: 293 -KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y+LP +KGAD + H V + G+M A++ G +W + P + Sbjct: 491 VDYNLPERFDLWYKGADNELHRPVMIHRAPFGSMERFVAILLEHTAGNLPLW---LVPEQ 547 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 ++++ I + K+ L + D+ E IG + A+ FP VIVG Sbjct: 548 VNILCI---SEKYEGYAHKVANLLQEADLRPHVDNRNETIGKKIREAETQKFPYMVIVGE 604 Query: 409 KFVSDSKVEIK 419 + ++ + ++ Sbjct: 605 EEEKNATLSVR 615 >gi|89100585|ref|ZP_01173444.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89084689|gb|EAR63831.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 423 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 98/449 (21%), Positives = 185/449 (41%), Gaps = 71/449 (15%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE +H+ + L M + + G+ +LP G + + + + +++ ++ G E+ P Sbjct: 25 EAEKRNHRKLGAELELFMFREEAPGMPFYLPKGMQVRNILENLWKQKHHKAGYHEVKTPI 84 Query: 74 LQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + LW +SG +D Y + M D +D A+ P I+ S +SYR LP + Sbjct: 85 MMKQALWEQSGHWDHYHENMYFSKVDEHDYAI--KPMSCPGAVLIYSSKRRSYRELPLRY 142 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 ++ L R EL G++R R F DA+ F ++ Sbjct: 143 AELGLVHRHELSGSLNGLLRVRSFTQDDAHLF--------------------------VR 176 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 ++ E+ + +L HEF L E +V S +F E + + SL S++++ Sbjct: 177 EDQIKEEAAKV-LELVHEFYSLFGF-EYKVELSTRPEEFMGSEETWNLAE-ASLESVLQE 233 Query: 252 WTAPYAATS----------DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 P+ S D H + DSL + + ++ FG +Y Sbjct: 234 RGIPFEINSGDGAFYGPKIDFH---ITDSLGRSWQCGTVQLDFQMPEQFGCQYI------ 284 Query: 302 FKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQ 359 G D H M I G++ A++ + G W ++P + ++ + +AH Sbjct: 285 --GEDNLAHRPIMIHRAIYGSIERFLAILIEHYAGDFPFW---LSPVQAMVLPVSEAHIG 339 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + ARL + GC + D E++G + A+L P +I+G K + ++ Sbjct: 340 YALE----VKARLEEAGCRIDIDSRAEKLGLKIREAELQKVPYMIIIGEKEIEQGGAALR 395 Query: 420 HRLTGIREDMSLEEVINYASHRFSN-NRP 447 + G + L+E+++ RF + +RP Sbjct: 396 KKGAGNLGVLHLQELLD----RFRDEDRP 420 >gi|319410089|emb|CBY90425.1| threonyl-tRNA synthetase (threonine-tRNA ligase; ThrRS) [Neisseria meningitidis WUE 2594] Length = 637 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 81/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +++Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEQRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 431 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ A+L G D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQLVIMNITENQA---DYCREVAAKLQAAGFRAELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|126651397|ref|ZP_01723604.1| threonyl-tRNA synthetase [Bacillus sp. B14905] gi|126591926|gb|EAZ86009.1| threonyl-tRNA synthetase [Bacillus sp. B14905] Length = 643 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 98/433 (22%), Positives = 187/433 (43%), Gaps = 38/433 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K+ L +L+E RD +L L T + +G+ WLP G + I +++ Sbjct: 232 KHHLQMLEEAKERDHRKIGKELELFTTS-QKVGQGLPLWLPNGATIRRVIERYIVDKELS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L S +L+ SG +D Y + + +++ +I P + ++++ + Sbjct: 291 LGYKHVYTPVLGSKELYQTSGHWDHYQDSIFPPMEMDNETLIMRPMNCPHHMMVYKNSMH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++ R E+ G+ R R + DA+ F + P+ K + K+ L Sbjct: 351 SYRSLPLRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIF-VRPDQIKAEFQKVVQLIL 409 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ L R LS+ D +T+ + + D M S + D Sbjct: 410 EVYKDFDLNDYSFR---------LSYR-----DPADTEKYFNDDAMWEKAQSMLKEAMDE 455 Query: 243 ISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + L+ E A Y DV ++ ++ + + +S ++ F ++ L + Sbjct: 456 LGLDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----S 504 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DGK H + G+ + R VA +IE + KG +P +AP ++ +I + ++ Sbjct: 505 YVGEDGKPHRPVVIHRGVVSTMERFVAFLIE---EYKG-AFPTWLAPVQVEVIPVS--NE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++I +L+ G V DD E++G + A + P +++G K V S V ++ Sbjct: 559 AHFDYAKQIEEQLTAAGLRVEMDDREEKLGYKIREAQMKKIPYMLVIGDKEVEASGVNVR 618 Query: 420 HRLTGIREDMSLE 432 + E +S E Sbjct: 619 RYGSKDSETISFE 631 >gi|323344262|ref|ZP_08084488.1| threonine--tRNA ligase [Prevotella oralis ATCC 33269] gi|323094991|gb|EFZ37566.1| threonine--tRNA ligase [Prevotella oralis ATCC 33269] Length = 654 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 99/416 (23%), Positives = 157/416 (37%), Gaps = 65/416 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R+ Q R G E+ P + S +L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTELRLRLQDMLRKIQKRFGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + ++F +SY++LP + +R E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEVFAWKPRSYKDLPLRIAEFGTVYRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ IF R P + +S EF+ + Sbjct: 383 SFTQDDAH----------------------IFCR------PDQVKS---------EFLRV 405 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D +T VF +F +F D D E W A + EK D+ Sbjct: 406 MDIIQT-VFKIFNFDNFEAQISLRDPKDREKYIGADEVWEESEQAIKEACAEKGLDAKIA 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLPMSATFKGADG---KDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 YGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFKLEYTDEDNVKKTPVMIHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ AV+ G +W PD VA IS + D +K+ G Sbjct: 525 GSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYAKKVSKYFDAQGV 576 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 DD E+IG + +L+ P VIVG K +D V ++ + G + M++EE Sbjct: 577 RATIDDRNEKIGRKIRDNELMRVPYMVIVGEKEAADGLVSMRKQGGGEQATMTMEE 632 >gi|56964462|ref|YP_176193.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16] gi|56910705|dbj|BAD65232.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16] Length = 643 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 85/389 (21%), Positives = 169/389 (43%), Gaps = 40/389 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ R G + P L S++L+ SG +D Y +M Sbjct: 264 QGLPLWLPKGATIRRIIERYIVDKEERLGYQHVYTPILGSSELYKTSGHWDHYQDDMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + +++ ++SYR LP ++ + R E+ G+ R R Sbjct: 324 MEMDNETLVLRPMNCPHHMMVYKQDMRSYRQLPLRIAELGMMHRYEMSGAVSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F P+ K + ++ ++ GL R LS+ D Sbjct: 384 TLNDAHIF-CRPDQIKEEFVRVVRLIQEVYKDFGLNDYKFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNEKLFDSLP 272 + + + D M + + D + L +I E A Y DV ++ +L Sbjct: 429 PEDKEKYFDDDDMWNKAQAMLKEAMDTLGLPYYEAIGE--AAFYGPKLDV---QVKTALG 483 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIE 330 + + +S ++ F ++ L T+ G DGK H + G+ + R VA ++E Sbjct: 484 KEETLSTVQLD----FLLPERFDL----TYVGEDGKLHRPVVVHRGVVSTMERFVAFLLE 535 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG + P +AP ++ +I + ++V D +++ +L + G V DD E++G Sbjct: 536 EY---KGAL-PTWLAPVQVQVIPVS--NEVHLDYAKRVIEQLQQAGVRVEIDDRDEKLGY 589 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + A + P +++G K V+ V ++ Sbjct: 590 KIREAQIQKIPYMLVLGDKEVAAEAVNVR 618 >gi|89890591|ref|ZP_01202101.1| prolyl-tRNA synthetase [Flavobacteria bacterium BBFL7] gi|89517506|gb|EAS20163.1| prolyl-tRNA synthetase [Flavobacteria bacterium BBFL7] Length = 492 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 71/341 (20%), Positives = 150/341 (43%), Gaps = 65/341 (19%) Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D+ GK + + ++ ++ PT E ++ + ++ I+SYR+LP Q R E+R R Sbjct: 102 DNPGKLRVDPEAKLEEELVVRPTSEAIIWNTYKGWIQSYRDLPLLINQWANVVRWEMRTR 161 Query: 147 FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 +R+ EFL ++ ++ HS K + AE+ + D+ Sbjct: 162 L-FLRTAEFLWQEGHT--------AHSTKKEAI-----------------AEAEQMN-DI 194 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 +F +++FM P+ + L + E+ +A + + Sbjct: 195 YADF-------------AQNFMAIPV---------VKGLKTESER----FAGADETY--- 225 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 ++L ++ + ++ G + G ++ F +GK YV S+G+ + R++ Sbjct: 226 CIEALMQD----GKALQAGTSHFLGQNFAKAFDVKFTSKEGKQEYVWATSWGV-STRLMG 280 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD---ACEKIYARLSKVGCDVFWDD 383 A+I + D KG++ P ++AP ++ ++ I D+ + ++ L G V +D Sbjct: 281 ALIMTHSDDKGLVLPPNLAPNQVVIVPIFKTDEQFEEITTVVNELMKSLRLKGVTVKYDK 340 Query: 384 MGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + G++FA +L G PL++ +G++ + + VE+ R T Sbjct: 341 RDTLRPGAKFAQHELQGVPLRIAIGARDLENGTVELARRDT 381 >gi|300856610|ref|YP_003781594.1| threonyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] gi|300436725|gb|ADK16492.1| threonyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] Length = 637 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 99/444 (22%), Positives = 184/444 (41%), Gaps = 60/444 (13%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +++E RD +L L + IH+ G + P G + + R+ ++ Sbjct: 229 KDYLTMMEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIIRNELQNYWRQVHHK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + + +LW +SG +D Y KE + +D+ P + ++++ I Sbjct: 287 AGYDEIMTPIILNEELWHQSGHWDHY-KENMYFTKIDDEDYAIKPMNCPGSILVYKNKIH 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKH---SYNKMFV 179 SYR+LP + ++ + R E G+MR R F DA+ F +T + K + K+ Sbjct: 346 SYRDLPIRYGEMGIVHRHEKSGALHGLMRVRCFTQDDAHIF-MTKDNMKDEIVNVIKLID 404 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 S+ ++F + R E +G D E A T + +D+ + + F Sbjct: 405 SFYKVFKFEYFVELSTRPEDS-MGSDEDWE----AATEGLKDALKAVGLDYKVNEGDGAF 459 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSL 296 Y D H L DS +G + GT + + Sbjct: 460 ----------------YGPKIDFH---LKDS-------------IGRTWQCGTVQLDFQM 487 Query: 297 P--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 P T+ GADG+ H V + G++ ++ ++ G +P +AP ++ ++N Sbjct: 488 PERFDLTYVGADGEKHRPVMVHRVVFGSIERFIGILIENYAG---AFPAWLAPVQVEVMN 544 Query: 354 IK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 I A D + EK+ +V D+ E+IG + A + P +++G K + Sbjct: 545 ITDAQDDYVNEVVEKLKENDIRVESDM----RNEKIGYKIREAQMQKVPYMIVLGEKEMK 600 Query: 413 DSKVEIKHRLTGIREDMSLEEVIN 436 D + ++ R G M+L++ I+ Sbjct: 601 DKTISVRSRKGGDMGTMALDDFIS 624 >gi|326336128|ref|ZP_08202300.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691637|gb|EGD33604.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 649 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 96/460 (20%), Positives = 178/460 (38%), Gaps = 64/460 (13%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T ++ +G+ WLP G + + A +R+ Q + G Sbjct: 230 YLTLLEEAKKRDHRKLGKELELFT-FSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR-LADRND-KAMIYGPTHEEVMTDIFRSHIK 123 ++ P + +L+V SG ++ YGK+ + +A N+ + + P + +I+ SH Sbjct: 289 YEQVVTPHIGHKNLYVTSGHWEKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNSHPW 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP F + +R E G+ R R F DA+ F TPE + + L Sbjct: 349 SYKDLPKRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIF-CTPEQLDAEFKHVIDLVL 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F LG ++ + + L D + D Sbjct: 408 YVFGSLGFENFTAQ--------------VSLRDPENLSKYIGSD---------------- 437 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT-- 292 E W +A + EK + E + G + +G + GT Sbjct: 438 -------ENWAKAESAIINAAKEKNLTYVIETGEAAFYGPKLDFMVKDALGRSWQLGTIQ 490 Query: 293 -KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y+LP +KGAD + H V + G+M A++ G +W + P + Sbjct: 491 VDYNLPERFDLWYKGADNEMHRPVMIHRAPFGSMERFVAILLEHTAGNLPLW---LVPEQ 547 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 ++++++ + K+ L + D+ E IG + A+ +P +IVG Sbjct: 548 VNILSV---SEKYEGYAYKVANLLQEADLRPHVDNRNETIGKKIREAETQKYPYMIIVGE 604 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN-RP 447 + + + ++ M + + I + N RP Sbjct: 605 EEEKNGTLSVRKHGGADLGTMKIADFITLIQEEINKNIRP 644 >gi|288959315|ref|YP_003449656.1| threonyl-tRNA synthetase [Azospirillum sp. B510] gi|288911623|dbj|BAI73112.1| threonyl-tRNA synthetase [Azospirillum sp. B510] Length = 650 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 87/393 (22%), Positives = 152/393 (38%), Gaps = 42/393 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + IR + +E+ P L + L+ SG +D YG Sbjct: 259 VQEEAVGSVFWHPKGWTLYRTLETYIRTKLKAADYVEVKTPQLIDSSLFKASGHWDMYGD 318 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M ++ AD +K + P + IFR+ ++SYR+LP + R+E G+ Sbjct: 319 NMFKVEADGGEKLLGIKPMNCPGHVQIFRNGLRSYRDLPIRMAEFGACHRNEPSGALHGI 378 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F DA+ F T + + + F L ++ LG I ++ P + E Sbjct: 379 MRVRAFTQDDAHIF-CTEDQVQSEAAEYFKLQLGVYKDLGFDQISVKLALRPDVRTGADE 437 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 A+ Q +P E A Y + H L D Sbjct: 438 LWDRAEGALAQALRDAGLEYEELPGEG-----------------AFYGPKVEFH---LTD 477 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVA 326 ++ R + G + Y +LP + A++ G DG H M I G+M Sbjct: 478 AI-------GRTWQCGTLQY---DPNLPERLDASYIGEDGARHRPIMLHRAILGSMERFI 527 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ + GK +W ++P ++++ I + D ++ L + G V D E Sbjct: 528 GMLIEHYAGKFPLW---LSPVQVTVATITSE---ADDYAVEVAKLLKRKGLRVELDTRNE 581 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +I + L PL ++VG + + V ++ Sbjct: 582 KINLKVREHSLQKVPLMLVVGKREAEERTVALR 614 >gi|194017643|ref|ZP_03056254.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194010915|gb|EDW20486.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 477 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 67/328 (20%), Positives = 135/328 (41%), Gaps = 68/328 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + + +++ I SYR+LP + Q +++ RP +R+ EFL ++ ++ Sbjct: 113 PTSEVLFAEHYKNIIHSYRDLPKLYNQWANVVRWEKTTRP---FLRTLEFLWQEGHTCHE 169 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 T + + +M Y + L +IP ++ E + F Sbjct: 170 TEQEAIEETERMLHIYASLCEEL--LAIP----------------VIKGRKTEKEKFAGA 211 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 F Y S +H+ + ++ Sbjct: 212 RFT---------------------------YTVESLMHD--------------GKALQTA 230 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 +FG ++ F +GK +VQ S+G R++ A+I D +G++ P ++A Sbjct: 231 TSHFFGNGFAKAFGIEFLNREGKLEHVQQTSWGF-TTRIIGAMIMVHGDDRGLVLPPNIA 289 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVG-CDVFWDDMGEQIGSQFAVADLLGFPLQV 404 P ++ ++ I +H + D ++ RL+++ D+ D +Q G +F ++ G PL+V Sbjct: 290 PTQVRIVPIASHKEGVLDHAYELKERLTRIARADI--DASDKQPGWKFNECEMQGIPLRV 347 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLE 432 VG K + +V + R TG ++ ++L+ Sbjct: 348 EVGPKDIEKGQVMLARRDTGEKQAVTLD 375 >gi|296876104|ref|ZP_06900158.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] gi|296432815|gb|EFH18608.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] Length = 647 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 89/415 (21%), Positives = 165/415 (39%), Gaps = 46/415 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P + S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPIASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++ H+ SYR LP +I + R E Sbjct: 314 REDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D ++F + PE + + K+ + ++ L R Sbjct: 374 GLQRVREMSLNDGHTF-VAPEQIEEEFKKILQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTD------FDDIISLNSIVEQWTAPYAATSD 261 + D + + D M EN DD+ E A Y D Sbjct: 422 ---LSYRDPEDKHKYFDNDEM-----WENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----HYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKQLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ E++ + + P Q+IVG K + D V ++ E MS++ + Sbjct: 578 VDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDKAVNVRRYGQKETETMSVDAFV 632 >gi|282555136|gb|ADA82660.1| ProS [Candidatus Blochmannia nearcticus] Length = 64 Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 32/63 (50%), Positives = 40/63 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P + SH+LMLR G+I Q S GIYSWLP G + L + IIREE Sbjct: 1 MRVSQYLLATLKEIPSNCTAISHRLMLRAGLIRQVSSGIYSWLPTGXRVLRKIKNIIREE 60 Query: 61 QNR 63 + Sbjct: 61 MGK 63 >gi|30022651|ref|NP_834282.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|29898209|gb|AAP11483.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 14579] Length = 646 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 175/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 230 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 289 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 290 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 349 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 350 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 408 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 409 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQGMLKE 454 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 455 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 506 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 ++ G DGK H + G+ + R VA +IE KG +P +AP ++ +I + Sbjct: 507 ---SYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVQVIPVS 559 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 560 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 617 Query: 416 VEIK 419 V ++ Sbjct: 618 VNVR 621 >gi|313890276|ref|ZP_07823910.1| threonine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] gi|313121381|gb|EFR44486.1| threonine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] Length = 648 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 83/404 (20%), Positives = 166/404 (41%), Gaps = 35/404 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ +G + P + S D + SG +D Y ++M Sbjct: 261 QGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPMASVDFYKTSGHWDHYREDMFPT 320 Query: 97 ADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D D + + P + ++++ H+ SYR LP ++ + R E G+ R RE Sbjct: 321 MDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 380 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + D + F +TP+ + + + + ++ L R LS+ Sbjct: 381 MTLNDGHLF-VTPDQIQEEFQRALQLIIDVYKDFNLTDYRFR---------LSYR----- 425 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D M S D + ++ E A Y D+ ++ +L Sbjct: 426 DPNDKEKYFDNDEMWEKAQSMLKAALDEMGVDYFEAEGEAAFYGPKLDI---QVKTALGN 482 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESS 332 + +S ++ F ++ L + GADG++H M G I M A++ + Sbjct: 483 EETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVISTMERFTAILIET 534 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 + G W +AP ++++I I V D ++ L G V DD E++ + Sbjct: 535 YKGAFPTW---LAPHQVTVIPISNEAHV--DYAWEVAKLLRDKGVRVDVDDRNEKMQYKI 589 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P Q+IVG K + + V ++ + + + +++ E ++ Sbjct: 590 RASQTGKIPYQLIVGDKEMDEKSVNVRRYGSKVTQTVAISEFVD 633 >gi|306825714|ref|ZP_07459053.1| threonine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432075|gb|EFM35052.1| threonine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 647 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 86/394 (21%), Positives = 163/394 (41%), Gaps = 36/394 (9%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P + S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPIASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++ H+ SYR LP +I + R E Sbjct: 314 REDMFPTMDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDL 206 G+ R RE + D ++F + PE + + K+ + ++ L R + P + Sbjct: 374 GLQRVREMSLNDGHTF-VAPEQIEEEFKKILQLIIDVYEDFNLTDYRFRLSYRDP---ED 429 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 H++ + E K MD + + D + E A Y D+ + Sbjct: 430 KHKYFDNDEMWENAQRMLKAAMD------DMELDYFEA-----EGEAAFYGPKLDI---Q 475 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVV 325 + +L + + +S ++ F ++ L + GADG++H M G I M Sbjct: 476 VKTALGKEETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGVISTMERF 527 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A++ ++ G W +AP +++LI + V D ++ +L G D+ Sbjct: 528 TAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRADVDERN 582 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E++ + + P Q+IVG K + D V ++ Sbjct: 583 EKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR 616 >gi|269102906|ref|ZP_06155603.1| threonyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] gi|268162804|gb|EEZ41300.1| threonyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] Length = 643 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 90/422 (21%), Positives = 158/422 (37%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G + +RE+ N+ E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWTIFRELEVFVREKLNQYDYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + G ++I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTESQVQQEVTSCIEMVYDTYKTFGFENIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + MD P I E A Y + L Sbjct: 433 ----AMWDKAEADLVTALESMDIPF--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + ++LP + AT+ G D + H M I G++ Sbjct: 472 HDCLD-------RAWQCGTV---QLDFALPERLGATYVGEDNERHTPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI + ++I +L K G V D Sbjct: 522 FIGILIEDYAG---FFPTWLAPQQAVVMNITDSQS---EYVQEIVEKLKKCGIRVNADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++ G + V +V ++ R +++++ Y S+ Sbjct: 576 NEKIGFKIREHTLKRVPYMLVCGDQEVEAGEVAVRTRKGKDLGKFKIDDLVAYMQQEISS 635 Query: 445 NR 446 + Sbjct: 636 RK 637 >gi|147678291|ref|YP_001212506.1| threonyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|146274388|dbj|BAF60137.1| threonyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] Length = 640 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 94/404 (23%), Positives = 155/404 (38%), Gaps = 57/404 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH G + P G + + REE + G E+ P + S +LW SG ++ Y + Sbjct: 260 IHDEGPGFPFFHPKGMILRNELEKFWREEHQKRGYQEIRTPVILSRNLWERSGHWEHY-R 318 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D P + I+++ + SYR LP ++ L R EL G+M Sbjct: 319 ENMYFTRIDDGDYAVKPMNCPGSILIYKNRLHSYRELPIRLAELGLVHRHELSGVLHGLM 378 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYN--KMFVSYLRIF---HRLGLKSIPMRAESGPIGGD 205 R R F DA+ F L + + ++ + R+F + + L + P +A +G D Sbjct: 379 RVRCFTQDDAHIFMLPSQVKEEIIGVIELVDDFYRVFGFPYHVELSTRPEKA----MGSD 434 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + E TG + +D+ + + F Y D H Sbjct: 435 ETWEMA----TGALRDALEARGLDYRVNEGDGAF----------------YGPKIDFH-- 472 Query: 266 KLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGA 321 L DSL R + G I F K+ L T+ G DG+ H V + G+ Sbjct: 473 -LQDSL-------GRTWQCGTIQLDFLMPEKFDL----TYIGEDGQKHRPVMIHRVVFGS 520 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVF 380 + ++ G W +AP ++ ++ I H R K+ L+ G Sbjct: 521 IERFIGILTEHFAGAFPAW---LAPVQVRVLPIADRHAGYAR----KVLDCLTGAGIRAE 573 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 D E+IG + A P ++ G K + V ++HR TG Sbjct: 574 LDARNEKIGYKIREAQAQKIPYMLVTGDKEAENGTVAVRHRTTG 617 >gi|28948887|pdb|1NJ8|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From Methanocaldococcus Janaschii gi|28948888|pdb|1NJ8|B Chain B, Crystal Structure Of Prolyl-Trna Synthetase From Methanocaldococcus Janaschii gi|28948889|pdb|1NJ8|C Chain C, Crystal Structure Of Prolyl-Trna Synthetase From Methanocaldococcus Janaschii gi|28948890|pdb|1NJ8|D Chain D, Crystal Structure Of Prolyl-Trna Synthetase From Methanocaldococcus Janaschii Length = 459 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 95/406 (23%), Positives = 149/406 (36%), Gaps = 92/406 (22%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL----------------W 80 KG +LP G K IIR + +G E P L DL W Sbjct: 28 KGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYW 87 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 V G GK L D + PT E + + + +K + +LP YQI FR Sbjct: 88 VTHG-----GKTQL------DVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFR 136 Query: 141 DELRPRFGVMRSREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 E + ++R RE + K+A++ T E +++ + Y + F LG IP Sbjct: 137 YETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLG---IPYLISK 193 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 P ++ FP FD I ++ Sbjct: 194 RP------------------------EWDKFPGAEYTMAFDTIFPDGRTMQ--------I 221 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 + VHN G +S F+ G Y YGI Sbjct: 222 ATVHN-------------------------LGQNFSKTFEIIFETPTGDKDYAYQTCYGI 256 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGC 377 RV+A++I D KG+I P VAP ++ ++ + K + + + ++IY +L K Sbjct: 257 SD-RVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKL-KGKF 314 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 V DD + G +F ++ G PL++ VG K + + K+ + R T Sbjct: 315 RVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDT 360 >gi|307353929|ref|YP_003894980.1| prolyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571] gi|307157162|gb|ADN36542.1| prolyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571] Length = 477 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 79/387 (20%), Positives = 148/387 (38%), Gaps = 68/387 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+Y W P G I+RE +R + + + E+ + +E+ + Sbjct: 35 KGLYVWFPHGFAIRKATYGILRELLDRDHEETLFPLLIPEYEFMKEAEHIKGFEEEVYWV 94 Query: 97 AD----RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 + + D + PT E + ++ ++S+ +LP YQI FR E + ++R Sbjct: 95 TNGGLSKLDVPLALRPTSETAIYPMYALWVRSHADLPIKLYQIVNTFRYETKHTRPLIRL 154 Query: 153 REFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE K+A++ T E +K Y + RL +P+ P Sbjct: 155 REITSFKEAHTVHATWEEAKEQVEDAIALYKEFYERL---CVPVIMSKRP---------- 201 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D+ FP A Y +D + Sbjct: 202 --------------DWDKFP---------------------GADYTIAADA-------VM 219 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P+ R ++VG + G ++ ++ +G+ Y YGI + R +AA+I Sbjct: 220 PD-----GRTLQVGTAHHLGDNFAKTFEICYEDENGEQQYAFQTCYGI-SERCIAALISI 273 Query: 332 SHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 D KG++ P +AP ++ ++ I K + A + I A + G V DD + G Sbjct: 274 HGDDKGLVLPPEIAPVQVVIVPIIMKKMAEEVTQAAKDIEAEMKAAGLRVKIDDRPLRPG 333 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKV 416 +++ ++ G PL++ +G + + + V Sbjct: 334 AKYYHWEMRGTPLRLEIGPRDLENGVV 360 >gi|294673774|ref|YP_003574390.1| proline--tRNA ligase [Prevotella ruminicola 23] gi|294473292|gb|ADE82681.1| proline--tRNA ligase [Prevotella ruminicola 23] Length = 493 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 69/345 (20%), Positives = 153/345 (44%), Gaps = 67/345 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ I S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEELIVRPTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMRTR-PFLRTSEFLWQEG 176 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E ++ KM L+++ + Sbjct: 177 HTAHATREEAEEEAQKM----LKVYAKF-------------------------------- 200 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 ++++M P+ + + S E+ +A D + +++ ++ + Sbjct: 201 ---AEEWMAVPV---------VQGVKSETER----FAGALDTYT---IEAMMQD----GK 237 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ T+ + K YV S+G+ + R++ A+I + D G++ Sbjct: 238 ALQSGTSHFLGQNFAKAFEVTYLNKENKPEYVWATSWGV-STRLIGALIMTHSDDNGLVL 296 Query: 341 PDSVAPFKISLINIKAH----DQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVA 395 P +AP ++ +I I +QV ++ I A +K G V +DD ++ G +FA Sbjct: 297 PPRLAPIQVVIIPIATKPEQMEQVNKEVTPIIEALRAK-GITVKFDDADNKRPGFKFADY 355 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G++ + + +E+ R T +E S++ + Y Sbjct: 356 ELKGVPVRLVLGARDLENGTIEVMRRDTLEKETRSIDGITEYVEQ 400 >gi|322517198|ref|ZP_08070081.1| threonine--tRNA ligase [Streptococcus vestibularis ATCC 49124] gi|322124257|gb|EFX95773.1| threonine--tRNA ligase [Streptococcus vestibularis ATCC 49124] Length = 648 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 86/399 (21%), Positives = 158/399 (39%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P + S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++ H+ SYR LP +I + R E Sbjct: 314 REDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D ++F + PE + + K+ + ++ L R Sbjct: 374 GLQRVREMSLNDGHTF-VAPEQIEDEFKKILQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTD------FDDIISLNSIVEQWTAPYAATSD 261 + D + + D M EN DD+ E A Y D Sbjct: 422 ---LSYRDPADKHKYFDNDEM-----WENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----HYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKELRDRGVRAE 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDGTVNVR 616 >gi|319763197|ref|YP_004127134.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|330825391|ref|YP_004388694.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans K601] gi|317117758|gb|ADV00247.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|329310763|gb|AEB85178.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans K601] Length = 639 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 89/387 (22%), Positives = 149/387 (38%), Gaps = 48/387 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I +HS G W P G V +R G E+ P + LW ++G +D Y + Sbjct: 255 IDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKAPQILDKSLWEKTGHWDKYRE 314 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + +++ D A+ P + IF+ IKSYR+LP + + R+E G+ Sbjct: 315 NMFVTESEKRDYAL--KPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDL 206 MR R F D + F T + +H R++ G I + + P IG D Sbjct: 373 MRVRGFTQDDGHIF-CTEDQIQHEVLAFTRLLQRVYQDFGFTDIVYKVATRPDARIGSD- 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + D E + S + + DF+ +P + K Sbjct: 431 -----EIWDKAEAALIES-------LKASGCDFE------------ISP--GEGAFYGPK 464 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMR 323 + +L K R + G I +S+P + A + G DG H V + +G++ Sbjct: 465 IEYTL---KDAIGRHWQCGTI---QVDFSMPERLDAEYVGEDGGRHRPVMLHRAIVGSLE 518 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ H G +W +AP +++++NI A CR+ K+ L V D Sbjct: 519 RFIGILIEQHAGALPVW---LAPVQVAVLNITDAQSDYCREIAAKLQKALPHQDLRVVQD 575 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSK 409 E+I + L P ++ G K Sbjct: 576 LRNEKITYKIREHALQKLPYILVAGDK 602 >gi|256370695|ref|YP_003108520.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM] gi|256009487|gb|ACU52847.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM] Length = 488 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 79/340 (23%), Positives = 140/340 (41%), Gaps = 69/340 (20%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ +I PT E ++ + ++ I SYR+LP F Q R E+RPRF +R+ EFL ++ Sbjct: 112 DEELIVRPTSETIIWNSYKRWINSYRDLPILFNQWANIIRWEMRPRF-FLRTSEFLWQEG 170 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T + + + KM Y SIP+ G S E G + Sbjct: 171 HTAHSTKKEAINHTKKMLNIYTNFVENFF--SIPVIQ-----GIKTSSE----KFAGAEK 219 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 FC + M + Sbjct: 220 TFCIESIMQ------------------------------------------------DGK 231 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 I++ + G +S + GK YV S+GI + R++ A+I + D KG+I Sbjct: 232 SIQIATSHFLGQNFSKAFDVKYTTKKGKKKYVWATSWGI-STRLIGAMIMTHSDDKGLIL 290 Query: 341 PDSVAPFKISLINI-KAHDQVCRDACEKIY----ARLSKVGCDVFWDDMGEQI-GSQFAV 394 P +AP +I +I + K +Q+ EKI A + K G ++ +D G +F Sbjct: 291 PPKIAPIQIVIIPVYKTQEQL--HLIEKIVFPLKASIEKKGINIKYDKRTYYTPGWKFNE 348 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 ++ G P+++ +G K + VE+ R T ++++S++++ Sbjct: 349 YEIQGIPIRITIGKKDLDRGTVEVVRRDTLEKKNISIKKL 388 >gi|34496803|ref|NP_901018.1| threonyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] gi|73919781|sp|Q7NYC6|SYT_CHRVO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|34102658|gb|AAQ59023.1| threonyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] Length = 633 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 91/417 (21%), Positives = 164/417 (39%), Gaps = 55/417 (13%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL ++ + H + G+ W P G + NV +R + N G E+ P Sbjct: 237 EAEKRDHRKLGVQLDLFHLQDEAPGMVFWHPKGWQLWQNVEQYMRAKLNHEGYKEVRTPM 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + A+LW SG +Y + M + + + P + IF S ++SYR+LP + Sbjct: 297 MMDANLWERSGHAANYRENMF-ITESEKRDYAVKPMNCPGHVQIFNSGLRSYRDLPLRYA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F+ D + F T + + ++ R G Sbjct: 356 EFGSCHRNEPSGALHGIMRVRGFVQDDGHIF-CTEDQINQEAKDFHRLVMEVYDRFGFDK 414 Query: 193 IPMRAESGP---IGGDLSHEFIVLADTGETQVF--CSKDFMDFPIPSENTDFDDIISLNS 247 + ++ P IG + + + A+ G + C ++ + P Sbjct: 415 VAIKLALRPEKRIGEESTWD---KAEEGMREALRACGVEWEELPGEG------------- 458 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGA 305 A Y + H + D+L R + G + + LP + A + Sbjct: 459 ------AFYGPKIEYH---IKDAL-------GRSWQCGTL---QLDFMLPERLDAEYVAD 499 Query: 306 DG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + V + +G++ ++ +H G +W +AP ++ ++NI + + Sbjct: 500 DNSRKRPVMLHRAALGSLERFLGILIENHAGAFPLW---LAPVQMVVMNIT---EAQAEY 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +I L K G V D E+IG + L P Q+IVG K +D V ++ R Sbjct: 554 AAEIAKELEKQGFRVELDLRNEKIGYKIREHSLQKLPYQIIVGDKEKADGLVAVRAR 610 >gi|229169303|ref|ZP_04297013.1| Threonyl-tRNA synthetase [Bacillus cereus AH621] gi|228614066|gb|EEK71181.1| Threonyl-tRNA synthetase [Bacillus cereus AH621] Length = 645 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 95/424 (22%), Positives = 174/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DGK H + G+ + R VA +IE KG +P +AP + +I + Sbjct: 506 ---TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQAQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|154490252|ref|ZP_02030513.1| hypothetical protein PARMER_00484 [Parabacteroides merdae ATCC 43184] gi|154089144|gb|EDN88188.1| hypothetical protein PARMER_00484 [Parabacteroides merdae ATCC 43184] Length = 651 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 96/413 (23%), Positives = 156/413 (37%), Gaps = 65/413 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ WLP G + + ++ Q + G ++ P + L+V SG Y YGK+ + Sbjct: 262 GLPLWLPRGTQLRLKLEDFLKRIQKKYGYQQVMTPHIGGKQLYVTSGHYAKYGKDSFQPI 321 Query: 97 -ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + + P + +IF+S +SY++LP F + +R E G+ R R Sbjct: 322 HTPQEGEEFLLKPMNCPHHCEIFKSFPRSYKDLPLRFAEFGTVYRYEQSGELHGLTRVRG 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F P+ K + K+ IF L ++ + I L Sbjct: 382 FTQDDAHLF-CRPDQLKDEFLKVMDIIFIIFKALDFENFEAQ--------------ISLR 426 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D K D I SE E W +A + EK + E Sbjct: 427 D---------KVNRDKYIGSE--------------ENWEKAESAIIEACQEKGLKAKIEY 463 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 + G + +G + GT Y+LP + G D K H V + G Sbjct: 464 GEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYTGEDNKKHRPVMIHRAPFG 523 Query: 321 AMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +M AV+ GK +W PD VA IS + D ++ +L Sbjct: 524 SMERFVAVLIEHTGGKFPLWLTPDQVAILPIS--------EKFNDYAYEVKRQLEAEDLS 575 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 V DD E+IG + +L P +IVG K +++V ++ + G + M + Sbjct: 576 VLVDDRNEKIGRKIRDTELKRIPYMLIVGEKEAENNEVSVRKQGEGDKGSMKI 628 >gi|15669423|ref|NP_248233.1| prolyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661] gi|2501043|sp|Q58635|SYP_METJA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|1591870|gb|AAB99242.1| prolyl-tRNA synthetase (proS) [Methanocaldococcus jannaschii DSM 2661] Length = 455 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 95/406 (23%), Positives = 149/406 (36%), Gaps = 92/406 (22%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL----------------W 80 KG +LP G K IIR + +G E P L DL W Sbjct: 24 KGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYW 83 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 V G GK L D + PT E + + + +K + +LP YQI FR Sbjct: 84 VTHG-----GKTQL------DVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFR 132 Query: 141 DELRPRFGVMRSREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 E + ++R RE + K+A++ T E +++ + Y + F LG IP Sbjct: 133 YETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLG---IPYLISK 189 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 P ++ FP FD I ++ Sbjct: 190 RP------------------------EWDKFPGAEYTMAFDTIFPDGRTMQ--------I 217 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 + VHN G +S F+ G Y YGI Sbjct: 218 ATVHN-------------------------LGQNFSKTFEIIFETPTGDKDYAYQTCYGI 252 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGC 377 RV+A++I D KG+I P VAP ++ ++ + K + + + ++IY +L K Sbjct: 253 SD-RVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKL-KGKF 310 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 V DD + G +F ++ G PL++ VG K + + K+ + R T Sbjct: 311 RVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDT 356 >gi|256819829|ref|YP_003141108.1| threonyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] gi|256581412|gb|ACU92547.1| threonyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] Length = 647 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 89/413 (21%), Positives = 153/413 (37%), Gaps = 61/413 (14%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 +G+ WLP G + + A +R+ Q + G ++ P + +L+V SG +D YGK+ + Sbjct: 260 QGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHIGHKNLYVTSGHWDKYGKDSFQP 319 Query: 96 LADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 +A N+ + + P + +I+ SH SY++LP F + +R E G+ R R Sbjct: 320 IATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPKRFAEFGTVYRYEQSGELHGLTRVR 379 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TPE + + L +F LG + + + L Sbjct: 380 CFTQDDAHIF-CTPEQLDDEFKHVIDLVLYVFGSLGFDNFTAQ--------------VSL 424 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + D E W A + EK + E Sbjct: 425 RDPENPTKYIGSD-----------------------ENWAKAENAIINAAKEKGLSYVIE 461 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP +KGAD + H V + Sbjct: 462 TGEAAFYGPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPF 521 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G+M A++ G +W + +SL + + +K+ L Sbjct: 522 GSMERFVAILLEHTAGNFPLWLNPSQAIVLSL------SEKYENYAQKVLRLLENSDIRT 575 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 D+ E +G + A+ P +IVG + V ++ R MS+E Sbjct: 576 LIDNRAETMGKKIREAETQKIPYMLIVGENEEKEGTVSVRKRGGEDLGSMSVE 628 >gi|42783753|ref|NP_981000.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|206969938|ref|ZP_03230892.1| threonyl-tRNA synthetase [Bacillus cereus AH1134] gi|218234238|ref|YP_002369371.1| threonyl-tRNA synthetase [Bacillus cereus B4264] gi|228923319|ref|ZP_04086607.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954844|ref|ZP_04116864.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960844|ref|ZP_04122479.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048283|ref|ZP_04193851.1| Threonyl-tRNA synthetase [Bacillus cereus AH676] gi|229072077|ref|ZP_04205286.1| Threonyl-tRNA synthetase [Bacillus cereus F65185] gi|229081828|ref|ZP_04214320.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|229112040|ref|ZP_04241583.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|229129859|ref|ZP_04258825.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|229147134|ref|ZP_04275493.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|229152770|ref|ZP_04280953.1| Threonyl-tRNA synthetase [Bacillus cereus m1550] gi|229180894|ref|ZP_04308229.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W] gi|229192776|ref|ZP_04319734.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|229198724|ref|ZP_04325422.1| Threonyl-tRNA synthetase [Bacillus cereus m1293] gi|296505048|ref|YP_003666748.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|42739683|gb|AAS43608.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|206735626|gb|EDZ52794.1| threonyl-tRNA synthetase [Bacillus cereus AH1134] gi|218162195|gb|ACK62187.1| threonine--tRNA ligase [Bacillus cereus B4264] gi|228584746|gb|EEK42866.1| Threonyl-tRNA synthetase [Bacillus cereus m1293] gi|228590615|gb|EEK48476.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228602451|gb|EEK59937.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W] gi|228630590|gb|EEK87236.1| Threonyl-tRNA synthetase [Bacillus cereus m1550] gi|228636383|gb|EEK92854.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228653550|gb|EEL09422.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|228671363|gb|EEL26664.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228701416|gb|EEL53910.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228711011|gb|EEL62977.1| Threonyl-tRNA synthetase [Bacillus cereus F65185] gi|228723008|gb|EEL74385.1| Threonyl-tRNA synthetase [Bacillus cereus AH676] gi|228798866|gb|EEM45845.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804833|gb|EEM51432.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228836273|gb|EEM81626.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296326100|gb|ADH09028.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|324328469|gb|ADY23729.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 645 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 175/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 ++ G DGK H + G+ + R VA +IE KG +P +AP ++ +I + Sbjct: 506 ---SYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|227534800|ref|ZP_03964849.1| threonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187556|gb|EEI67623.1| threonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 674 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 87/386 (22%), Positives = 158/386 (40%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 277 GLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANLDLYKTSGHWDHYREDMFPPM 336 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VALDQVQEEFKKILRLIMDVYEDFNITDYSFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S D + L+ E A Y D+ + +L + Sbjct: 442 PKNTEKYFDDDEMWTRSQSMLKGAMDDLKLDYYEAEGEAAFYGPKLDIQTKT---ALGND 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F +++L T+ G DG++H M GI G M A + + Sbjct: 499 ETMSTIQLD----FMLPERFNL----TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIY 550 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP + LI + ++ + D +I ++ G V DD E++G + Sbjct: 551 KGAFPTW---LAPTQAVLIPV--NNDLHLDYVNRIKKQMLVAGLRVKVDDRNEKMGYKIR 605 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P V+VG K ++D+ V ++ Sbjct: 606 EAQTKKIPYTVVVGDKELNDAAVSVR 631 >gi|254477067|ref|ZP_05090453.1| threonyl-tRNA synthetase [Ruegeria sp. R11] gi|214031310|gb|EEB72145.1| threonyl-tRNA synthetase [Ruegeria sp. R11] Length = 648 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 97/430 (22%), Positives = 168/430 (39%), Gaps = 59/430 (13%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K L +L+E A+ KL G+ H + + G W P G + + +R Q+ Sbjct: 234 KAHLTMLEEA---AKRDHRKLGKEMGLFHMQEEAPGQVFWHPNGWRIYTQLQDYMRRMQD 290 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-----IYGPTHEEVMTDI 117 R G +E++ P + LW +SG +D Y + M + D A P + + Sbjct: 291 RDGYVEVNTPQVVDRKLWEKSGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQV 350 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 F +KSYR+LP + R E G+MR R F D + F E S Sbjct: 351 FNQGLKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIF--CAEDQITSETA 408 Query: 177 MFVSYL-RIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 F+++L +++ LG + ++ + P IG D + + + A GE C DF Sbjct: 409 KFIAFLSKVYADLGFHNWTIKLSTRPEKRIGSDETWDHMEQA-LGEA---CKAAGYDF-- 462 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 I+E A Y + L D++ N + ++ Sbjct: 463 --------------EILEGEGAFYGPKLEF---TLTDAIGRNWQCGTLQVDA-------- 497 Query: 293 KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 +LP + ATF G DG H V + +G+ ++ H GK W +AP ++ Sbjct: 498 --NLPERLEATFIGQDGAKHRPVMLHRACLGSFERFIGILIEEHAGKLPFW---LAPRQV 552 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + +I + D ++ +L G D E+I + + P+ + VG++ Sbjct: 553 VVASITSE---ADDYVLEVVEQLKAAGVRAEADMRNEKINYKVREHSVGKVPVILAVGAR 609 Query: 410 FVSDSKVEIK 419 V + V ++ Sbjct: 610 EVEERTVSVR 619 >gi|163942310|ref|YP_001647194.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|229013779|ref|ZP_04170907.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|229062260|ref|ZP_04199581.1| Threonyl-tRNA synthetase [Bacillus cereus AH603] gi|229135411|ref|ZP_04264199.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|163864507|gb|ABY45566.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|228648054|gb|EEL04101.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228716988|gb|EEL68669.1| Threonyl-tRNA synthetase [Bacillus cereus AH603] gi|228747448|gb|EEL97323.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 645 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 95/424 (22%), Positives = 174/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DGK H + G+ + R VA +IE KG +P +AP + +I + Sbjct: 506 ---TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQAQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|118586378|ref|ZP_01543828.1| threonyl-tRNA synthetase 1 [Oenococcus oeni ATCC BAA-1163] gi|118433195|gb|EAV39911.1| threonyl-tRNA synthetase 1 [Oenococcus oeni ATCC BAA-1163] Length = 663 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 92/410 (22%), Positives = 169/410 (41%), Gaps = 43/410 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + E++ + G + + P + + DL+ SG +D Y +M Sbjct: 267 GLPVWLPNGAAIRRTIEDYLVEKERQNGYMNVYTPVVSNLDLYKRSGHWDHYRDDMFPAM 326 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI-QLKFRDELRPRFGVMRSREF 155 ND + + P + +IF +SYR+LP+ + Q+ ++ G+ R RE Sbjct: 327 TANDGEQLELRPMNCPSHIEIFEHEPRSYRDLPYRIAEFGQMHRWEKSGALTGLSRVREM 386 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF-IVLA 214 + D ++ + PE + + + ++H G D + F + Sbjct: 387 TLNDGHTV-VAPEQVEPEFKGILQLIRDVYHDFGFT-------------DQDYRFRLSYR 432 Query: 215 DTGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D T+ + D M + + DD+ E A Y D+ + +L Sbjct: 433 DPKNTKKYYDDDAMWEHAQAALKRAMDDMGLDYFEAEGEAAFYGPKLDI---QFKTALGN 489 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESS 332 + +S ++ F KY+ G DGKDH + G +G M A + Sbjct: 490 EETMSTIQLDFLLPERFDMKYT--------GEDGKDHRPVLIHRGVVGTMERFVAFLIEK 541 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G+ W +AP + +I N AH R+ IY++L K G + D+ E++G Sbjct: 542 YKGQFPTW---LAPVQAVVIPVNYGAHGDYARN----IYSKLMKDGRRIKLDNRDEKLGY 594 Query: 391 QFAVADL-LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL---EEVIN 436 A + L P ++VG + + D+ V ++ R + ++M + EE+IN Sbjct: 595 LIRDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTKEMKIDEFEEMIN 644 >gi|325265785|ref|ZP_08132472.1| threonine--tRNA ligase [Kingella denitrificans ATCC 33394] gi|324982768|gb|EGC18393.1| threonine--tRNA ligase [Kingella denitrificans ATCC 33394] Length = 637 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 80/396 (20%), Positives = 152/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R E + G E+ P + W +SG + +Y Sbjct: 255 LQDEAPGMVFWHPRGWTLWQVIEQHMRRELDAAGYREVKTPQIMDKTFWEKSGHWANYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M A + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMFLTASEKREYAV-KPMNCPGHVQIFNNTLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F+ DA+ F T + K + ++I+ + G + + ++ P S E Sbjct: 374 RVRGFVQDDAHIF-CTEDQIAEETRKFNLLVMKIYQQFGFEHVSVKLSLRPEQRAGSDEI 432 Query: 211 IVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 A+ G + C ++ + P A Y + H + Sbjct: 433 WDKAEQGLRDALTACGVEWQELPGEG-------------------AFYGPKVEYH---IK 470 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVV 325 D+L R + G I + LP + A + D K V + +G++ Sbjct: 471 DAL-------GRSWQCGTI---QLDFVLPERLDAEYVAEDNSKKRPVMLHRAILGSLERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H G +W +AP ++ ++NI D C ++ +L G D Sbjct: 521 IGILIEEHAGSFPLW---LAPVQMVVMNITEKQA---DYCREVVEKLKAAGFRAEADLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + + +P Q++VG K + + +V ++ + Sbjct: 575 EKIGYKIRDNSQMRYPYQIVVGDKEMENGQVAVRRK 610 >gi|241758603|ref|ZP_04756718.1| threonine--tRNA ligase [Neisseria flavescens SK114] gi|241321255|gb|EER57427.1| threonine--tRNA ligase [Neisseria flavescens SK114] Length = 637 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 149/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +++Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNVAGYKEVKTPQIMDKTFWEKSGHWENYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVDEARAFNELLV---RIYKQFGFHDVAVKLSLRPEQRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 E A+ G + +P E + I +++ W V E Sbjct: 431 EVWDKAEQGLRDALTACGVEWEELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLNAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE +H G +W +AP ++ ++NI + D C ++ +L G V D Sbjct: 522 GILIE-NHAGSFPLW---LAPVQMVIMNITENQA---DYCREVAVKLQAAGFRVELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|291531005|emb|CBK96590.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium siraeum 70/3] Length = 639 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 105/437 (24%), Positives = 166/437 (37%), Gaps = 49/437 (11%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L T I G +LP G + + R+ R G Sbjct: 232 YLNMIEEAKKRDHRKLGKELELFT--IMDEGPGFPFFLPKGMTLKNTLIDYWRQIHTRDG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 +E+S P + + LW SG +D Y + M + D + A+ P + +++S +S Sbjct: 290 YVEISTPIMLNRQLWETSGHWDHYKENMYTTVIDGTEFAI--KPMNCPGGILVYKSKPRS 347 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ L R E G+MR R F DA+ F +TP+ + Sbjct: 348 YRDLPIRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIF-MTPDQITDEIKGVVRLIDE 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G K + V T S++ D D + Sbjct: 407 VYKLFGFK------------------YHVELSTQPEDSMGSQEDWDMATEGLRKALDSLG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SAT 301 + E A Y D H E DSL R + G I + LPM Sbjct: 449 LPYVVNEGDGAFYGPKIDFHLE---DSL-------GRTWQCGTI---QLDFQLPMRFELE 495 Query: 302 FKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQ 359 + GADG+ H + + G++ ++ G IW +AP ++ L+ I H++ Sbjct: 496 YTGADGEKHRPIMIHRVVFGSIERFIGILTEHFAGAFPIW---LAPVQVELMPIADRHNE 552 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 K+ A L K G V D E+IG + A L P +++G K V V I+ Sbjct: 553 F----TSKVAAELKKRGIRVEVDGRSEKIGFKIREAQLQKIPYMLVIGDKEVETENVSIR 608 Query: 420 HRLTGIREDMSLEEVIN 436 R G MS+ + + Sbjct: 609 CRKRGDIGTMSVSDFCD 625 >gi|304387978|ref|ZP_07370150.1| threonine--tRNA ligase [Neisseria meningitidis ATCC 13091] gi|304337977|gb|EFM04115.1| threonine--tRNA ligase [Neisseria meningitidis ATCC 13091] Length = 643 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 81/396 (20%), Positives = 151/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +++Y Sbjct: 261 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKD 320 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 321 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 379 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 380 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEQRAGSD 436 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 437 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPE 496 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 497 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 527 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE ++ G +W +AP ++ ++NI + D C ++ A+L G V D Sbjct: 528 GILIE-NYAGSFPLW---LAPVQLVIMNITENQA---DYCREVAAKLQAAGFRVELDLRN 580 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 581 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 616 >gi|315225228|ref|ZP_07867045.1| threonine--tRNA ligase [Capnocytophaga ochracea F0287] gi|314944911|gb|EFS96943.1| threonine--tRNA ligase [Capnocytophaga ochracea F0287] Length = 646 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 89/413 (21%), Positives = 153/413 (37%), Gaps = 61/413 (14%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 +G+ WLP G + + A +R+ Q + G ++ P + +L+V SG +D YGK+ + Sbjct: 260 QGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHIGHKNLYVTSGHWDKYGKDSFQP 319 Query: 96 LADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 +A N+ + + P + +I+ SH SY++LP F + +R E G+ R R Sbjct: 320 IATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPKRFAEFGTVYRYEQSGELHGLTRVR 379 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TPE + + L +F LG + + + L Sbjct: 380 CFTQDDAHIF-CTPEQLDDEFKHVIDLVLYVFGSLGFDNFTAQ--------------VSL 424 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + D E W A + EK + E Sbjct: 425 RDPENPTKYIGSD-----------------------ENWAKAENAIINAAKEKGLSYVIE 461 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP +KGAD + H V + Sbjct: 462 TGEAAFYGPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPF 521 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G+M A++ G +W + +SL + + +K+ L Sbjct: 522 GSMERFVAILLEHTAGNFPLWLNPSQAIVLSL------SEKYENYAQKVLRLLENSDIRT 575 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 D+ E +G + A+ P +IVG + V ++ R MS+E Sbjct: 576 LIDNRAETMGKKIREAETKKIPYMLIVGENEEKEGTVSVRKRGGEDLGSMSVE 628 >gi|297619256|ref|YP_003707361.1| prolyl-tRNA synthetase [Methanococcus voltae A3] gi|297378233|gb|ADI36388.1| prolyl-tRNA synthetase [Methanococcus voltae A3] Length = 481 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 89/406 (21%), Positives = 158/406 (38%), Gaps = 70/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLR 95 KG +LP G K I+R+ + T E P L L + G + + E+ Sbjct: 46 KGCGVYLPYGFKIRRYSFEILRDLLDSTKHDETLFPMLIPETLLAKEGEHIKGFEDEVFW 105 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + + D + PT E + + + +K + +LPF YQ FR E + ++R Sbjct: 106 VTHGGKNELDVRLALRPTSETAIYYMMKQWLKVHTDLPFKIYQTVNTFRYETKHTRPLIR 165 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE + +A++ T E + + Y F L SIP+ P Sbjct: 166 LREIMTFNEAHTAHSTKEECEAQVKEGMYVYSSFFEAL---SIPVLISKRP--------- 213 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ FP T +D I Sbjct: 214 ---------------EWDKFPGAEYTTAYDTI---------------------------- 230 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 P+ K +++G + G ++ F+ ADG+ Y YGI RV+A++I Sbjct: 231 YPDGK-----TMQIGTVHNLGQHFATTFDLEFETADGEKDYAYQTCYGISD-RVIASIIA 284 Query: 331 SSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 D G++ P VAP +I++I + K ++ + +IY +L K + D + Sbjct: 285 IHGDKNGLLIPPKVAPVQIAMIPLLFKGKEEKVLEKANEIYDKLKKF-VRIELDTRDIRP 343 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F +L G PL++ +G + + + KV I R + D+++E++ Sbjct: 344 GRKFNDWELKGVPLRIELGPRDLENGKVMIFRRDKNEKFDIAIEDL 389 >gi|217962055|ref|YP_002340625.1| threonyl-tRNA synthetase [Bacillus cereus AH187] gi|222098038|ref|YP_002532095.1| threonyl-tRNA synthetase [Bacillus cereus Q1] gi|229141301|ref|ZP_04269839.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|217064460|gb|ACJ78710.1| threonyl-tRNA synthetase [Bacillus cereus AH187] gi|221242096|gb|ACM14806.1| threonyl-tRNA synthetase [Bacillus cereus Q1] gi|228642082|gb|EEK98375.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26] Length = 645 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 175/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 ++ G DGK H + G+ + R VA +IE KG +P +AP ++ +I + Sbjct: 506 ---SYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGMRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|116495184|ref|YP_806918.1| threonyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|122263399|sp|Q037Z6|SYT_LACC3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116105334|gb|ABJ70476.1| Ser-tRNA(Thr) hydrolase [Lactobacillus casei ATCC 334] Length = 657 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 87/386 (22%), Positives = 158/386 (40%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 260 GLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANLDLYKTSGHWDHYREDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALDQVQEEFKKILRLIMDVYEDFNITDYSFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S D + L+ E A Y D+ + +L + Sbjct: 425 PKNTEKYFDDDEMWTRSQSMLKGAMDDLKLDYYEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F +++L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFNL----TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP + LI + ++ + D +I ++ G V DD E++G + Sbjct: 534 KGAFPTW---LAPTQAVLIPV--NNDLHLDYVNRIKKQMLVAGLRVKVDDRNEKMGYKIR 588 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P V+VG K ++D+ V ++ Sbjct: 589 EAQTKKIPYTVVVGDKELNDAAVSVR 614 >gi|312863291|ref|ZP_07723529.1| threonine--tRNA ligase [Streptococcus vestibularis F0396] gi|311100827|gb|EFQ59032.1| threonine--tRNA ligase [Streptococcus vestibularis F0396] Length = 648 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 86/399 (21%), Positives = 158/399 (39%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P + S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++ H+ SYR LP +I + R E Sbjct: 314 REDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D ++F + PE + + K+ + ++ L R Sbjct: 374 GLQRVREMSLNDGHTF-VAPEQIEDEFKKILQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTD------FDDIISLNSIVEQWTAPYAATSD 261 + D + + D M EN DD+ E A Y D Sbjct: 422 ---LSYRDPADKHKYFDNDEM-----WENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QVKTALGKEETLSTIQLD----FLLPERFDL----HYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKELRDRGVRAE 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDGTVNVR 616 >gi|295399484|ref|ZP_06809466.1| threonyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|312109958|ref|YP_003988274.1| threonyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] gi|294978950|gb|EFG54546.1| threonyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|311215059|gb|ADP73663.1| threonyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] Length = 644 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 92/403 (22%), Positives = 169/403 (41%), Gaps = 36/403 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S +L+ SG +D Y + M Sbjct: 264 QGLPLWLPKGATVRRIIERYIVDKEIELGYQHVYTPVLGSVELYKTSGHWDHYKENMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I+++ I SYR LP ++ R E+ G+ R R Sbjct: 324 MEMDNEQLVLRPMNCPHHMMIYKNKIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ L ++ GL R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKDEFKRVVNLILEVYKDFGLDEYSFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M S + D + L E A Y DV ++ +L ++ Sbjct: 429 PHDKEKYYDDDEMWEKAQSMLREAMDELGLEYYEAEGEAAFYGPKLDV---QVRTALGKD 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPERFDL----TYIGEDGKPHRPVVIHRGVVSTMERFVAFLIEEY 537 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ +I + + D K+ L G V D E+IG + Sbjct: 538 ---KG-AFPTWLAPVQVEVIPVSPEAHL--DYAYKVKETLQSQGFRVEVDGRDEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P ++VG K ++++ V ++ E M+L + I Sbjct: 592 REAQIQKIPYMLVVGDKEMAENAVNVRKYGEQKSETMALADFI 634 >gi|251772034|gb|EES52606.1| threonyl-tRNA synthetase [Leptospirillum ferrodiazotrophum] Length = 587 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 88/407 (21%), Positives = 157/407 (38%), Gaps = 43/407 (10%) Query: 19 EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD 78 +I + RT + ++ G+ WLP G + + I + +R G + P + D Sbjct: 192 KIGKEQGFFRT--LDENGAGMVLWLPRGARIRRVIEEIWKTRHDRHGYQYVYTPHIARLD 249 Query: 79 LWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 LW +SG +D Y + M + P + IF+ +KSYR+LP ++ Sbjct: 250 LWKQSGHWDFYRESMFSPMEIEGSEFELKPMNCPFHILIFKEAVKSYRDLPVRLAELGTV 309 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 +R E G++R R F DA+ F PE K+ + G + + Sbjct: 310 YRYERSGTLHGLLRVRGFTQDDAHIF-CRPEDIASEIGKVLTLVDEMLLPFGFTNRSVYL 368 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPY 256 + P G S E LA TG + + + I P E + I + Sbjct: 369 STRPEGSVGSDENWALA-TGALEEALKNAGIPYEIDPGEGVFYGPKIDM----------- 416 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD-HYVQMG 315 K D L ++S ++ F K+ + T++ + G D + + Sbjct: 417 ---------KFHDVLGRTWQLSTIQVD----FNLPEKFDI----TYRDSSGNDVRPIMIH 459 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSK 374 +G++ ++ G +W +AP +++++ I H R KI L + Sbjct: 460 RALLGSVERFFGILVEHFKGAFPLW---LAPEQVTILPIADRHIPYAR----KIAETLEQ 512 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G V D E+IG++ A L+ P ++G + D + I+HR Sbjct: 513 EGVRVVTDFRNEKIGAKIRDAQLMKIPQMWVLGDREAQDETISIRHR 559 >gi|254674303|emb|CBA10087.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha275] Length = 637 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 81/396 (20%), Positives = 151/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +++Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEQRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 431 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE ++ G +W +AP ++ ++NI + D C ++ A+L G V D Sbjct: 522 GILIE-NYAGSFPLW---LAPVQLVIMNITENQA---DYCREVAAKLQAAGFRVELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|261392911|emb|CAX50492.1| threonyl-tRNA synthetase (threonine--tRNA ligase; ThrRS) [Neisseria meningitidis 8013] gi|325203807|gb|ADY99260.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240355] Length = 637 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 81/396 (20%), Positives = 151/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R+E N G E+ P + W +SG +++Y Sbjct: 255 LQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + ++SYR+LP + R+E G+M Sbjct: 315 NMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ V RI+ + G + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEDQIVSEARAFNELLV---RIYKQFGFHDVSVKLSLRPEQRAGSD 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDVHNE 265 + A+ G + + +P E + I +++ W V E Sbjct: 431 DVWDKAEQGLREALTACGVEWGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPE 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 +L AR + + H +GS R + Sbjct: 491 RLDAEYVTENNDRARPVML-------------------------HRAILGSL----ERFI 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE ++ G +W +AP ++ ++NI + D C ++ A+L G V D Sbjct: 522 GILIE-NYAGSFPLW---LAPVQLVIMNITENQA---DYCREVAAKLQAAGFRVELDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + FP Q++VG K ++KV ++ + Sbjct: 575 EKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRK 610 >gi|312113796|ref|YP_004011392.1| threonyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311218925|gb|ADP70293.1| threonyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 640 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 12/208 (5%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H+ + R + + + G W P G + A +R Q Sbjct: 230 KSYLTMLEE----AEKRDHRRLGREMDLFHLQEEAPGSVFWHPKGWTVFQALIAFMRRRQ 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + +G +E++ P + LW +SG ++ +G+ M +++ P + IF++ Sbjct: 286 HASGHVEVNSPDMMERKLWEQSGHWEKFGENMFVTETPDERVFCCKPMNCPGHIQIFKNG 345 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP + R E G+MR R F DA+ F TPE + Sbjct: 346 LKSYRDLPLRIAEFGKVHRYEPSGALHGIMRVRHFTQDDAHIF-CTPEQITEECVHLNSL 404 Query: 181 YLRIFHRLGLKSIPMRAESGP---IGGD 205 L I+ G + + ++ + P +G D Sbjct: 405 LLSIYRDFGFEDVVIKLSTRPEKRVGSD 432 >gi|260911583|ref|ZP_05918168.1| threonine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] gi|260634289|gb|EEX52394.1| threonine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] Length = 654 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 94/416 (22%), Positives = 153/416 (36%), Gaps = 65/416 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R+ Q R G E+ P + S +L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTELRLRLQDMLRKIQKRFGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + ++F +SY++LP + +R E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEVFAWKPRSYKDLPLRIAEFGTVYRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F PE K+ + ++ +F + + I L Sbjct: 383 SFTQDDAHIF-CRPEQVKNEFLRVMDIIQAVFKIFQFDNFEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D T + D E W A D EK D+ Sbjct: 428 RDPNNTTKYIGSD-----------------------EVWEESEQAIIDACKEKGLDAKIA 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 YGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFKLEYTAEDNTKKTPVMVHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+M +AV+ G +W PD VA IS + D +++ L VG Sbjct: 525 GSMERFSAVLIEHTTGHFPLWLIPDQVAILPIS--------EKFNDYAQRVAKYLDSVGV 576 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 D E+IG + ++ P VIVG K + V ++ + G + M++EE Sbjct: 577 RATLDVRNEKIGRKIRDNEIKRVPYMVIVGEKEAEEGLVSMRKQGGGEQATMTMEE 632 >gi|119719726|ref|YP_920221.1| prolyl-tRNA synthetase [Thermofilum pendens Hrk 5] gi|152112960|sp|A1RYD8|SYP_THEPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119524846|gb|ABL78218.1| prolyl-tRNA synthetase [Thermofilum pendens Hrk 5] Length = 482 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 4/163 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++ G +++ + TF DGK YV YG G R+ AA+I D KG+ Sbjct: 222 GRVLQISSTHDLGQRFAKAFNVTFLDKDGKRKYVWQTCYGPGIWRITAALIAIHGDDKGL 281 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAV 394 + P +VAP ++ ++ I ++ + + C K+ A + + G V+ D E G +F Sbjct: 282 VLPMNVAPIQVVIVPIYYKESDKERVLEKCRKLEAMIREAGYRVYLDAREEYTPGWKFND 341 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++ VG + V V + R ++E ++ E+I++ Sbjct: 342 WELKGVPVRLEVGVREVETGTVTVFRRDLRVKEKVADSELISH 384 >gi|148261186|ref|YP_001235313.1| threonyl-tRNA synthetase [Acidiphilium cryptum JF-5] gi|166223313|sp|A5G0L2|SYT_ACICJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146402867|gb|ABQ31394.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidiphilium cryptum JF-5] Length = 640 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 97/429 (22%), Positives = 161/429 (37%), Gaps = 49/429 (11%) Query: 17 DAEIASHKLMLRT-GMIHQHSKGIYS--WLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + R + H + + S W G + V A +R Q G IE+ P Sbjct: 238 EAERRDHRKIGRQMDLFHMQEEAVGSVFWHEKGWRLYRTVEAYMRRRQEEFGYIEVRTPQ 297 Query: 74 LQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 L LW SG +D+Y M + + DK + P + IF ++SYR LP Sbjct: 298 LLDRKLWEASGHWDNYRSHMFIAEVEDEDKVLAVKPMNCPCHVQIFNHGLRSYRELPLRM 357 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGL 190 + R E G+MR R F DA+ F E FV L R++ G Sbjct: 358 AEFGACHRYEPSGALHGIMRVRAFAQDDAHIF--CTEDQIADETVRFVEMLRRVYADFGF 415 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI-PSENTDFD---DIISLN 246 ++ P S E A+ + C ++F + P E + + + + Sbjct: 416 PEFAVKFADRPTPRSGSDEVWDKAEAA-LRSACETAGVEFTVNPGEGAFYGPKLEFVLRD 474 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 +I W V E+L S + AR + + Sbjct: 475 AIGRDWQCGTLQVDFVLPERLDASYVTAESGRARPVML---------------------- 512 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 H +GS+ R + +IE+ G+ +W +AP + ++ +I D E Sbjct: 513 ---HRAIVGSF----ERFIGILIENCA-GRFPLW---LAPTQAAVASIVTD---ANDYAE 558 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + ARL + G V D E+I ++ L P ++VG + V I+ + + Sbjct: 559 TVAARLKEAGLAVATDTRNEKINAKVRDLSLALVPNILVVGRREAEQQTVSIRRLGSDKQ 618 Query: 427 EDMSLEEVI 435 + M+L+E I Sbjct: 619 DSMTLDEAI 627 >gi|157690994|ref|YP_001485456.1| prolyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|157679752|gb|ABV60896.1| proline--tRNA ligase [Bacillus pumilus SAFR-032] Length = 477 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 67/328 (20%), Positives = 135/328 (41%), Gaps = 68/328 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + + +++ I SYR+LP + Q +++ RP +R+ EFL ++ ++ Sbjct: 113 PTSEVLFAEHYKNIIHSYRDLPKLYNQWANVVRWEKTTRP---FLRTLEFLWQEGHTCHE 169 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 T + + +M Y + L +IP ++ E + F Sbjct: 170 TEQEAIEETERMLHIYASLCEEL--LAIP----------------VIKGRKTEKEKFAGA 211 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 F Y S +H+ + ++ Sbjct: 212 RFT---------------------------YTVESLMHD--------------GKALQTA 230 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 +FG ++ F +GK +VQ S+G R++ A+I D +G++ P ++A Sbjct: 231 TSHFFGNGFAKAFGIEFLNREGKLEHVQQTSWGF-TTRIIGAMIMVHGDDRGLVLPPNIA 289 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVG-CDVFWDDMGEQIGSQFAVADLLGFPLQV 404 P ++ ++ I +H + D ++ RL+++ D+ D +Q G +F ++ G PL+V Sbjct: 290 PTQVRIVPIASHKEGVLDHAYELKDRLTRIARADI--DASDKQPGWKFNECEMQGIPLRV 347 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLE 432 VG K + +V + R TG ++ ++L+ Sbjct: 348 EVGPKDIEKGQVMLARRDTGEKQAVTLD 375 >gi|162147243|ref|YP_001601704.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209544293|ref|YP_002276522.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|189083610|sp|A9HFP5|SYT_GLUDA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161785820|emb|CAP55391.1| Threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209531970|gb|ACI51907.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 641 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 94/409 (22%), Positives = 153/409 (37%), Gaps = 55/409 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G W P G + + +R Q R G E+ P L LW SG +D Y + Sbjct: 256 IQEEAVGSIFWHPKGWRLYTALQDYMRRAQTRGGYQEVRTPQLVDRALWEASGHWDKYRE 315 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + + DK + P + IFR ++SYR LP + R E G+ Sbjct: 316 HMFIATVEDEDKTLALKPMNCPCHVQIFRHGLRSYRELPLRMAEFGACHRYEPSGALHGI 375 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGGDLSH 208 MR R F DA+ F E + FV L ++ LG +S ++ P S Sbjct: 376 MRVRSFTQDDAHIF--CTESQIAAETARFVRMLAEVYADLGFESFRVKFADRPEQRAGSD 433 Query: 209 EFIVLADTGETQVFCSKDFMDFPI-PSENTDFD---DIISLNSIVEQWTAPYAATSDVHN 264 E A+ + C +++ P E + + + ++I W V Sbjct: 434 ETWDRAEGALIEA-CRLAGVEYEYNPGEGAFYGPKLEFVLRDAIGRDWQCGTLQVDYV-- 490 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMR 323 LPE + A+F G D H M I G+ Sbjct: 491 ------LPER-----------------------LDASFVGEDSARHRPVMLHRAILGSFE 521 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA---CEKIYARLSKVGCDVF 380 ++ H G+ +W +AP ++ + +I DA E++ L++ G V Sbjct: 522 RFLGILIEQHAGRFPLW---LAPVQVVVASI------VTDAAPYAEQVAETLTQAGLVVE 572 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 D E+I ++ L P+ ++VG K D V I+ RL G +++ Sbjct: 573 TDIRNEKINAKVREHSLARVPVILVVGRKEAEDGTVAIR-RLGGAAQEV 620 >gi|120434969|ref|YP_860655.1| threonyl-tRNA synthetase [Gramella forsetii KT0803] gi|117577119|emb|CAL65588.1| threonyl-tRNA synthetase [Gramella forsetii KT0803] Length = 667 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 86/406 (21%), Positives = 161/406 (39%), Gaps = 39/406 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 +G+ WLP G + + +++ Q + G + P + S +L+V SG Y YG++ + Sbjct: 278 QGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVSPHIGSKELYVTSGHYAKYGEDSFQP 337 Query: 96 LADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ N+ + + P + +++ + SYR+LP F + +R E G+ R R Sbjct: 338 ISTPNEGEEFMLKPMNCPHHCEMYNASSWSYRDLPKRFAEFGTVYRYEQSGELHGLTRVR 397 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + PE + K+ L +F LG + + + L Sbjct: 398 GFTQDDAHIFCM-PEQLDEEFKKVIDLTLYVFSSLGFEDFTAQ--------------VSL 442 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D S + D LN +VE A + D + Sbjct: 443 RDPDNKEKYIGSDDAWEKAESAIINAADEKGLNYVVETGEAAFYGPK-------LDFMV- 494 Query: 274 NKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIE 330 K R ++G I Y+LP T+KG+D + H V + G+M A++ Sbjct: 495 -KDALGRSWQLGTI---QVDYNLPERFDLTYKGSDNESHRPVMIHRAPFGSMERFIAILL 550 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 G +W + P + ++++ + +K+ L D+ E IG Sbjct: 551 EHTGGNFPLW---LMPEQAIILSLS---EKYEKYSQKVLTLLENNEIRALADNRNETIGK 604 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + A++ +P +IVG + D + ++ G M +E+ N Sbjct: 605 KIREAEVNKYPYMLIVGEQEAKDGTISVRKHSEGDLGTMKIEDFAN 650 >gi|297583666|ref|YP_003699446.1| threonyl-tRNA synthetase [Bacillus selenitireducens MLS10] gi|297142123|gb|ADH98880.1| threonyl-tRNA synthetase [Bacillus selenitireducens MLS10] Length = 649 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 88/400 (22%), Positives = 169/400 (42%), Gaps = 37/400 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G V I + + R G + P L S DL+ SG +D Y +M + Sbjct: 264 QGLPLWLPKGATVRRQVERYIVDIEERLGYDHVYTPVLGSVDLYKTSGHWDHYQDDMFPV 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P + I+++ SYRNLP ++ R E+ G+ R R Sbjct: 324 LQMDNEDLVLRPMNCPHHMMIYKNEKHSYRNLPLRIAELGTMHRHEMSGALAGLQRVRAM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F P+ K + ++ ++ +K R LS+ D Sbjct: 384 TLNDAHIF-CRPDQLKDEFIRVVELIQAVYKDFQIKDYYFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M + + D + + I + A Y DV ++ +L ++ Sbjct: 429 PEDKEKYVDNDEMWEKAQAMLKEAVDEMGVEYIEADGEAAFYGPKLDV---QVKTALGKD 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F+ ++ L T+ G DGKDH + G+ + R VA ++E Sbjct: 486 ETLSTVQLD----FHLPNRFDL----TYTGEDGKDHRPVVIHRGVVSTMERFVAFLLEEY 537 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP + LI + + V D ++ L + G V D E++G + Sbjct: 538 ---KG-AFPTWLAPVQAELIPV---NDVHLDYVRQVEDELKRAGVRVHVDVRNEKLGYKI 590 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 A + P +++G + ++ V ++ E++SL+ Sbjct: 591 REAQMQKVPYLLVLGDQERDNASVNVRRYGQKDSEEVSLD 630 >gi|167762197|ref|ZP_02434324.1| hypothetical protein BACSTE_00549 [Bacteroides stercoris ATCC 43183] gi|167699840|gb|EDS16419.1| hypothetical protein BACSTE_00549 [Bacteroides stercoris ATCC 43183] Length = 497 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 67/341 (19%), Positives = 141/341 (41%), Gaps = 65/341 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ I SYR+LP Q FR E+R R +R+ EFL ++ Sbjct: 118 EEELIIRPTSETIIWNTYKNWINSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFLWQEG 176 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 + T ++ + V L ++ K + + G Sbjct: 177 H----TAHATREEAEEEAVRMLNVYSEFAEKYMAVPVVKG-------------------- 212 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 + S N F ++ +I E + Sbjct: 213 -----------VKSANERFAGALNTYTI------------------------EAMMQDGK 237 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ F + K YV S+G+ + R++ A+I + D G++ Sbjct: 238 ALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGV-STRLMGALIMTHSDDNGLVL 296 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 P +AP ++ ++ I + ++ EK I A+L +G V +D+ ++ G +FA + Sbjct: 297 PPHLAPIQVVIVPIYKNAEMLAKIDEKVAGIVAKLKAMGISVKYDNADNKRPGFKFADYE 356 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 + G P+++++G + + ++ +E+ R T +E S + + Y Sbjct: 357 VKGVPVRLVMGGRDLENNTMEVMRRDTLEKETRSCDGIEEY 397 >gi|228472897|ref|ZP_04057654.1| proline--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] gi|228275479|gb|EEK14256.1| proline--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] Length = 492 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 72/350 (20%), Positives = 142/350 (40%), Gaps = 65/350 (18%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GK M+ + ++ +I PT E ++ + +++ I+SYR+LP Q R E+R R Sbjct: 105 GKLMVDPEAKLEEELIVRPTSEAIIWNTYKNWIQSYRDLPLLINQWANVVRWEMRTRL-F 163 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E + KM Y + +P Sbjct: 164 LRTAEFLWQEGHTAHATREEAVEEAQKMNDVYATFVEK--YMGVP--------------- 206 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 ++ E++ F DD + ++++ A A TS Sbjct: 207 -VIRGHKTESERFAGA--------------DDTYCIEALMQDGKALQAGTS--------- 242 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 + G ++ F +G YV S+G+ + R++ A+I Sbjct: 243 ------------------HFLGQNFAKAFEVKFANKEGVLDYVWASSWGV-STRLMGALI 283 Query: 330 ESSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDV-FWDDMG 385 S D G++ P +AP ++ ++ I + Q R+ + L + V F DD Sbjct: 284 MSHSDDNGLVLPPLLAPIQVVIVPIYKGEEQLQAIRERITPLMKALKERNISVKFDDDDT 343 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++ G +F +L G P+++ +G + + ++ E+ R T +E +S + +I Sbjct: 344 QKPGFKFHEYELKGVPVRLAIGQRDLENNTYEVSRRDTLTKESVSGDNII 393 >gi|152976959|ref|YP_001376476.1| threonyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025711|gb|ABS23481.1| threonyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 643 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 95/424 (22%), Positives = 173/424 (40%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 227 KKAELDEHMRMLEEAKERDHRKLGKELKLFTNNQKVGQGLPLWLPKGATIRRIIERYIVD 286 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M +++ ++ P + +++ Sbjct: 287 KEVSLGYNHVYTPVLGSRELYETSGHWNHYRDGMFPSMQMDNEELVLRPMNCPHHMMVYK 346 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 347 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 405 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 406 NLTLEVYKDFGLENYSFR---------LSYR-----DPEDTKKYYADDEMWEKAQGMLKE 451 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 452 AMDEMGLEYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 503 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DGK H + G+ + R VA +IE KG +P +AP ++ +I + Sbjct: 504 ---TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVQVIPVS 556 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 557 P--QVHLDYAKKVQEELQRAGIRVEVDTREEKIGYKIREAQMQKIPYMLVVGDNEVAENG 614 Query: 416 VEIK 419 V ++ Sbjct: 615 VNVR 618 >gi|294101704|ref|YP_003553562.1| threonyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] gi|293616684|gb|ADE56838.1| threonyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] Length = 633 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 88/398 (22%), Positives = 151/398 (37%), Gaps = 44/398 (11%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA 103 P G L+ + R+ + G E+ P + LW+ SG +D Y ++ + + ++ Sbjct: 263 PKGMAILNKLTEFWRQVHEKNGYCEIRTPLILDRSLWIRSGHWDHY-RDNMYFTEIDEMP 321 Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYS 162 P + I++S I+SYR+LP ++ + R E G+MR R F DA+ Sbjct: 322 FAIKPMNCPGGILIYKSQIRSYRDLPLRMAELGIVHRHERSGVLHGLMRVRCFTQDDAHL 381 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 + TPE K + I+ + M + P S E +A+T + Sbjct: 382 Y-CTPEQVKDEIKGIMYLCQYIYRDIFGFKYTMELSTRPENSMGSEEQWNIAETALKEAL 440 Query: 223 CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + M + + + F Y D H E R Sbjct: 441 EETN-MQYRVNPGDGAF----------------YGPKIDFHLEDCI----------GRTW 473 Query: 283 EVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGI 338 + G I F K+ L TF GADGK+H V + +G++ ++ G Sbjct: 474 QCGTIQLDFQMPEKFDL----TFVGADGKEHRPVMLHRTILGSLERFFGILIEQFAGAFP 529 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 W +AP ++ L+ I + D + A+L V D E++G + A + Sbjct: 530 YW---LAPVQVRLLPI---SEDFLDYARLVQAKLVANNIRVEIDSRDEKLGKKIRDAQIQ 583 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 P ++G K V+ +V + R G MS+ I+ Sbjct: 584 KIPYMAVIGEKEVASDQVAPRERSRGDLGAMSINSFID 621 >gi|322411327|gb|EFY02235.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 647 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 88/399 (22%), Positives = 161/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 252 MISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWEHY 311 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M + D D + + P + ++++H+ SYR LP ++ + R E Sbjct: 312 QEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELPIRIAELGMMHRYEKSGALS 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 372 GLQRVREMTLNDGHIF-VTPEQIRDEFKRTLQLIIDVYEDFNLTDYRFR---------LS 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTD------FDDIISLNSIVEQWTAPYAATSD 261 + D +T + D M EN DD+ E A Y D Sbjct: 422 YR-----DPEDTHKYYDNDEM-----WENAQAMLKGAMDDMGVDYFEAEGEAAFYGPKLD 471 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 472 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 520 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D +I L G Sbjct: 521 TMERFTAILIETYKGAFPTW---LAPHQVTVIPISNEAHI--DYAWEIAKTLRDRGVRAD 575 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 DD E++ + + P Q+IVG K + + V ++ Sbjct: 576 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEEKSVNVR 614 >gi|296117435|ref|ZP_06836023.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295976037|gb|EFG82827.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 642 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 106/440 (24%), Positives = 167/440 (37%), Gaps = 61/440 (13%) Query: 17 DAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + R G+ H + + G W P G + + +R Q R G E+ P Sbjct: 238 EAERRDHRRIGREMGLFHIQEEAVGQIFWHPKGWRLYSVLQDYMRRAQTRNGYQEVRTPQ 297 Query: 74 LQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 L LW SG +D Y + M + + DK + P + IFR ++SYR LP Sbjct: 298 LVDRGLWEASGHWDKYRQHMFIATVEDEDKTLALKPMNCPCHVQIFRHGLRSYRELPLRM 357 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGL 190 + R E G+MR R F DA+ F E FV L ++ LG Sbjct: 358 AEFGACHRYEPSGALHGIMRVRGFTQDDAHIF--CTEEQIADETARFVRMLSAVYQDLGF 415 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + H + AD P + DD + Sbjct: 416 E----------------HFRVKFADR----------------PEQRAGSDDTWDRSENAL 443 Query: 251 QWTAPYAATSDVHN--EKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFK 303 + A HN E F P+ + V I G + GT Y +P + AT+ Sbjct: 444 KEACHMAGVEYEHNPGEGAFYG-PKLEFVLRDAI--GRDWQCGTLQVDYVMPERLDATYV 500 Query: 304 GADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVC 361 G D H M I G+ ++ H G+ +W +AP ++ + +I + Sbjct: 501 GEDSARHRPVMLHRAILGSFERFLGILIEQHAGRFPMW---LAPVQVVVASIVTDAEPYA 557 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 R+ EK+ A V DV E+I ++ L P+ ++VG K + V ++ R Sbjct: 558 REVVEKLQAAGVVVEADV----RNEKINAKIREHSLARVPVILVVGRKEAEERTVALR-R 612 Query: 422 LTG-IREDMSLEEVINYASH 440 L G +E + L+E + +H Sbjct: 613 LGGKAQEIVPLDEAVTALAH 632 >gi|226355500|ref|YP_002785240.1| threonyl-tRNA synthetase [Deinococcus deserti VCD115] gi|259516378|sp|C1D0W2|SYT_DEIDV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226317490|gb|ACO45486.1| putative threonine--tRNA ligase (threonyl-tRNA synthetase) [Deinococcus deserti VCD115] Length = 649 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 85/395 (21%), Positives = 153/395 (38%), Gaps = 48/395 (12%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + ++E+Q R G + P + + +L+ SG Y Y Sbjct: 266 GKGLPLWLPNGTVLREELAGFLKEQQFRRGYQGVITPNIGNLELYKTSGHYPYYADGQFN 325 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + +D+ + P + I+ S +SYR+LP + +R E G+ R R Sbjct: 326 PIEVDDEQYMLKPMNCPHHVRIYASKPRSYRDLPVRLAEFGTVYRYEQSGELNGLTRVRG 385 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA-----ESGPIGGDLSHE 209 F DA+ F P+ K + + + + G+ + R ES GD ++ Sbjct: 386 FTQDDAHLF-CRPDQLKKEFLDVLDLTVLVLKTFGMNDVRFRVGTRDPESDKYVGDEAN- 443 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + E Q+ + D + P E D A Y D Sbjct: 444 ----WELAERQILEAVDEVGLPYTIEPGD--------------AAFYGPKLDF------- 478 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVA 326 K V R ++G I Y+LP ++ G DG+DH + + G++ Sbjct: 479 ---VVKDVLGREWQLGTI---QVDYNLPERFDISYVGEDGQDHRPIMIHRAPFGSLERFV 532 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ + G +W +AP ++ +I I + E++ + L G DD Sbjct: 533 GILIEHYAGDFPLW---LAPRQVMIIPIADRHN---EYAEELRSELHAAGLRAEVDDSSN 586 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ ++ A+L P+ +IVG K +V ++ R Sbjct: 587 RMQAKVRTAELSKIPVMLIVGDKEQEARQVSVRER 621 >gi|152996610|ref|YP_001341445.1| threonyl-tRNA synthetase [Marinomonas sp. MWYL1] gi|189083612|sp|A6VYI1|SYT_MARMS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|150837534|gb|ABR71510.1| threonyl-tRNA synthetase [Marinomonas sp. MWYL1] Length = 645 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 94/440 (21%), Positives = 166/440 (37%), Gaps = 55/440 (12%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD KL L + + + G+ W P G + V +R++Q Sbjct: 232 YLTRIEEAEKRDHRKLGKKLDLFH--VQEEAPGMVFWHPKGWRLYQAVEQYMRQKQLDNN 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG + Y + M N + P + ++ +KSY Sbjct: 290 YQEVKTPQIVDRVLWEKSGHWGKYHENMFTTHSENRDYAV-KPMNCPCHIQVYNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-R 183 R+LPF + R+E G+MR R F+ D + F EG F+ L Sbjct: 349 RDLPFRMAEFGSCHRNEPSGALHGIMRVRNFVQDDGHIF--VTEGQIQQEVSEFIDLLHE 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G +I R + P S E A+ ++ S +P E + I Sbjct: 407 VYADFGFDNIVYRLSTRPEQRVGSDEVWDKAEKALSEALDSAGLDWEELPGEGAFYGPKI 466 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--M 298 + L D+ +G ++ GT +S+P + Sbjct: 467 EFS--------------------LKDA-------------IGRVWQCGTIQVDFSMPTRL 493 Query: 299 SATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 A + DG + V + +G++ ++ +G +W +AP ++ ++NI Sbjct: 494 GAQYVSEDGSRQTPVMLHRAIVGSLERFIGILIEDTEGAFPVW---LAPEQVVIMNITDR 550 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D C + RL+ G D E+IG + L P ++VG K V +V Sbjct: 551 QA---DYCSVLEKRLNSNGFRAKLDLRNEKIGFKIREHTLQRVPYMIVVGDKEVEQEQVA 607 Query: 418 IKHRLTGIREDMSLEEVINY 437 ++ R TG ED+ + + ++ Sbjct: 608 VRTR-TG--EDLGVMSISDF 624 >gi|225870895|ref|YP_002746842.1| threonyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] gi|225700299|emb|CAW94574.1| threonyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] Length = 655 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 86/394 (21%), Positives = 162/394 (41%), Gaps = 36/394 (9%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 261 MISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWEHY 320 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++H+ SYR LP ++ + R E Sbjct: 321 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELPIRIAELGMMHRYEKSGALS 380 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 381 GLQRVREMTLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR---------LS 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + D +T + D M S D++ + E A Y D+ + Sbjct: 431 YR-----DPKDTHKYYDNDEMWENAQSMLKAALDEMGADYFEAEGEAAFYGPKLDI---Q 482 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVV 325 + +L + +S ++ F +++L ++ GADG++H M G I M Sbjct: 483 VKTALGNEETLSTIQLD----FLLPERFNL----SYIGADGEEHRPVMIHRGVISTMERF 534 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A++ ++ G W +AP ++++I I + D ++ L G DD Sbjct: 535 TAILIETYKGAFPTW---LAPRQVTVIPISNEAHI--DYAWEVAKILRDHGIRADVDDRN 589 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E++ + + P Q+IVG K + D V ++ Sbjct: 590 EKMQYKIRASQTSKIPYQLIVGDKEMQDKSVNVR 623 >gi|195978510|ref|YP_002123754.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975215|gb|ACG62741.1| threonyl-tRNA synthetase ThrS [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 655 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 86/399 (21%), Positives = 163/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 M+ Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 261 MVSQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWEHY 320 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++H+ SYR LP ++ + R E Sbjct: 321 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELPIRIAELGMMHRYEKSGALS 380 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 381 GLQRVREMTLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR---------LS 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + D +T + D M EN +L+ + E A Y D Sbjct: 431 YR-----DPKDTHKYYDNDEM-----WENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLD 480 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F +++L ++ GADG++H M G I Sbjct: 481 I---QVKTALGNEETLSTIQLD----FLLPERFNL----SYIGADGEEHRPVMIHRGVIS 529 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 530 TMERFTAILIETYKGAFPTW---LAPRQVTVIPISNEAHI--DYAWEVAKTLRDHGIRAD 584 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 DD E++ + + P Q+IVG K + D V ++ Sbjct: 585 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVR 623 >gi|254993456|ref|ZP_05275646.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] Length = 445 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 86/403 (21%), Positives = 169/403 (41%), Gaps = 36/403 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ R G + P + + +L+ SG +D Y ++M Sbjct: 65 QGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPT 124 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P + I+++ I SYR LP ++ + R E+ G+ R R Sbjct: 125 MKMDNEELVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGM 184 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ L ++ +K R LS+ D Sbjct: 185 TLNDAHVF-VRPDQIKDEFKRVVELILEVYKDFDIKDYSFR---------LSYR-----D 229 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M + D + ++ E A Y DV ++ ++ + Sbjct: 230 PKNTEKYFDDDAMWEKAQAMLKSAMDEMEMDYFEAEGEAAFYGPKLDV---QVKTAIGKE 286 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DG+ H + G+ + R VA +IE Sbjct: 287 ETLSTVQLD----FLLPERFDL----TYIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY 338 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ LI + A + D + + +L + G DD E++G + Sbjct: 339 ---KG-AFPTWLAPVQMELIPVNADAHL--DYAKGVQDKLQRAGLRAEVDDRNEKLGYKI 392 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A P +++G + V V ++ + E M L+ I Sbjct: 393 REAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFI 435 >gi|251781963|ref|YP_002996265.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390592|dbj|BAH81051.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126789|gb|ADX24086.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 647 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 89/415 (21%), Positives = 167/415 (40%), Gaps = 46/415 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 252 MISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWEHY 311 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M + D D + + P + ++++H+ SYR LP ++ + R E Sbjct: 312 QEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELPIRIAELGMMHRYEKSGALS 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R LS Sbjct: 372 GLQRVREMTLNDGHIF-VTPEQIRDEFKRTLQLIIDVYEDFNLTDYRFR---------LS 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTD------FDDIISLNSIVEQWTAPYAATSD 261 + D +T + D M EN DD+ E A Y D Sbjct: 422 YR-----DPEDTHKYYDNDEM-----WENAQAMLKGAMDDMGVDYFEAEGEAAFYGPKLD 471 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F ++ L + GADG++H M G I Sbjct: 472 I---QVKTALGNEETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVIS 520 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 521 TMERFTAILIETYKGAFPTW---LAPHQVTVIPISNEAHI--DYAWEVAKTLRDRGVRAD 575 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E++ + + P Q+IVG K + + V ++ + S+E+ + Sbjct: 576 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTESVEDFV 630 >gi|150400672|ref|YP_001324438.1| prolyl-tRNA synthetase [Methanococcus aeolicus Nankai-3] gi|171460849|sp|A6UTK4|SYP_META3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150013375|gb|ABR55826.1| prolyl-tRNA synthetase [Methanococcus aeolicus Nankai-3] Length = 456 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 97/410 (23%), Positives = 157/410 (38%), Gaps = 74/410 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG +LP G K IR+ + + E P L DL + G + +E + Sbjct: 25 KGCGVYLPYGFKIRRYAFEAIRDMLDESNHDEALFPMLIPEDLLAKEGEHIKGFEEEVYW 84 Query: 97 ADRN-----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 D + PT E + + + IK + +LP YQI FR E + ++R Sbjct: 85 VTHGGTTPLDVKLALRPTSETPIYHMMKLWIKVHTDLPIKIYQIVNSFRYETKHTRPLIR 144 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE + K+A++ T E ++ Y F R+G+ +I Sbjct: 145 LREIMTFKEAHTAHSTSEEAEAQVQTALNIYKTFFDRMGVPTI----------------- 187 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 V ++ FP FD I ++ T VHN Sbjct: 188 ----------VSQRPEWDKFPGADYTMAFDTIFPDGKTMQIGT--------VHN------ 223 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +G +F + L G D Y YGI R++A++I Sbjct: 224 -------------LGQ--HFAKTFELEFETPEGGKD----YAYQTCYGISD-RIIASIIA 263 Query: 331 SSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 D KG+I P VAP +I +I + K +++ + ++IY L K V DD + Sbjct: 264 LHGDEKGLILPPEVAPHQIIIIPLLFKGKEEIAMNKAKEIYKSL-KNTYRVKLDDRDIRP 322 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEV 434 G +F +L G P+++ +G + + ++K+ I R TG I ED L E+ Sbjct: 323 GKKFNDWELKGAPIRIELGPRDIENNKLTIYRRDTGEKFQIDEDNLLNEL 372 >gi|118479724|ref|YP_896875.1| threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|118418949|gb|ABK87368.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] Length = 646 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 175/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 230 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 289 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 290 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 349 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 350 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 408 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 409 NLTLEVYKDFGLENYSFR---------LSYR-----DPEDTKKYYADDEMWEKAQGMLKE 454 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 455 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 506 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 ++ G DGK H + G+ + R VA +IE KG +P +AP ++ +I + Sbjct: 507 ---SYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVQVIPVS 559 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 560 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 617 Query: 416 VEIK 419 V ++ Sbjct: 618 VNVR 621 >gi|16800662|ref|NP_470930.1| threonyl-tRNA synthetase [Listeria innocua Clip11262] gi|22654125|sp|Q92BF5|SYT_LISIN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|16414081|emb|CAC96825.1| threonyl-tRNA synthetase [Listeria innocua Clip11262] gi|313618753|gb|EFR90658.1| threonyl-tRNA synthetase [Listeria innocua FSL S4-378] Length = 640 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 86/403 (21%), Positives = 170/403 (42%), Gaps = 36/403 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ R G + P + + +L+ SG +D Y ++M Sbjct: 260 QGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPT 319 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P + I+++ I SYR LP ++ + R E+ G+ R R Sbjct: 320 MKMDNEELVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ L ++ +K R LS+ D Sbjct: 380 TLNDAHVF-VRPDQIKDEFKRVVELILEVYKDFDIKDYSFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M + D ++++ E A Y DV ++ ++ + Sbjct: 425 PKNTEKYFDDDAMWEKAQAMLKSAMDEMNMDYFEAEGEAAFYGPKLDV---QVKTAIGKE 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DG+ H + G+ + R VA +IE Sbjct: 482 ETLSTVQLD----FLLPERFDL----TYIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY 533 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ LI + A + D + + +L + G DD E++G + Sbjct: 534 ---KG-AFPTWLAPVQMELIPVNADAHL--DYAKGVQDKLQRAGLRAEVDDRNEKLGYKI 587 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A P +++G + V V ++ + E M L+ I Sbjct: 588 REAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFI 630 >gi|88803834|ref|ZP_01119357.1| threonyl-tRNA synthetase [Polaribacter irgensii 23-P] gi|88780362|gb|EAR11544.1| threonyl-tRNA synthetase [Polaribacter irgensii 23-P] Length = 646 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 104/441 (23%), Positives = 178/441 (40%), Gaps = 49/441 (11%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T + G+ WLP G + +++ Q + G Sbjct: 231 YLALLEEAKQRDHRKLGRELELFT-FSQKVGAGLPLWLPKGAALRGRLEDFLKKAQKKAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +L+V SG Y+ YG + + + D+ + P + +++ Sbjct: 290 YEMVMTPHIGQKELYVTSGHYEKYGADSFQSIKTPKMDEEFLLKPMNCPHHCEVYNFKPY 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP F + +R E G+ R R F DA+ F TPE + + L Sbjct: 350 SYKDLPKRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CTPEQLDQEFKDVIDLVL 408 Query: 183 RIFHRLGLK----SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 +F LG + + +R ++ P ++I +T E + I S TD Sbjct: 409 YVFSSLGFEDFTAQVSIRDKNTP------EKYIGDVETWE--------IAENAIISAATD 454 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP- 297 L+ +VE+ A + + KL D + K R ++G I Y+LP Sbjct: 455 ----KGLSFVVEEGEAAF------YGPKL-DFMV--KDALGRSWQLGTI---QVDYNLPK 498 Query: 298 -MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+KGAD + H V + G+M AV+ G +W + P ++ L+ I Sbjct: 499 RFDLTYKGADNQLHRPVMIHRAPFGSMERFIAVLLEHTGGNFPLW---LTPDQVILLPIS 555 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 Q EK+ L D+ E+ G + A++ P VIVG K + Sbjct: 556 DKYQ---KYSEKVLESLENSEIRALADNRNEKTGRKIRDAEVSKTPYMVIVGEKEEQEGT 612 Query: 416 VEIKHRLTGIREDMSLEEVIN 436 V ++ G ++EE I+ Sbjct: 613 VSVRKHGEGDIGTFTIEEFIS 633 >gi|295135444|ref|YP_003586120.1| threonyl-tRNA synthetase [Zunongwangia profunda SM-A87] gi|294983459|gb|ADF53924.1| threonyl-tRNA synthetase [Zunongwangia profunda SM-A87] Length = 648 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 88/405 (21%), Positives = 159/405 (39%), Gaps = 43/405 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 +G+ WLP G + + +++ Q + G + P + +L+V SG Y YG++ + Sbjct: 261 QGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVSPHIGHKELYVTSGHYAKYGEDSFQP 320 Query: 96 -LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + + P + +++ S SYR+LP F + +R E G+ R R Sbjct: 321 IKTPHEGEEFLLKPMNCPHHCEMYNSQSWSYRDLPKRFAEFGTVYRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TPE + K+ L +F LG ++ + + L Sbjct: 381 GFTQDDAHIF-CTPEQLDEEFKKVIDLTLYVFDSLGFENFTAQ--------------VSL 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDI--ISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D + + D D +EN + LN ++E A + D + Sbjct: 426 RDPENKEKYIGSD--DVWEKAENAIINAAKEKGLNYVIETGEAAFYGPK-------LDFM 476 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAV 328 K R ++G I Y+LP T+KG+D + H V + G+M A+ Sbjct: 477 V--KDALGRSWQLGTI---QVDYNLPERFDLTYKGSDNESHRPVMIHRAPFGSMERFIAI 531 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + G +W + P + ++++ + +K+ + L D+ E I Sbjct: 532 LLEHTAGNFPLW---LMPEQAIILSL---SEKYEKYSQKVLSLLENHEIRAVLDNRNETI 585 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G + A++ FP +IVG + D V ++ G M +EE Sbjct: 586 GKKIREAEVQKFPYMLIVGEQEAKDGTVSVRKHGEGDIGTMPVEE 630 >gi|94984677|ref|YP_604041.1| prolyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] gi|114152189|sp|Q1J0W2|SYP_DEIGD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|94554958|gb|ABF44872.1| prolyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] Length = 497 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 81/410 (19%), Positives = 160/410 (39%), Gaps = 71/410 (17%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLRL----AD 98 P G +N+ + + TG + PTL + E+ + + E+ + + Sbjct: 54 PYGTALWENIQRWLDDRFKATGHESLIFPTLIPMNFITKEADHVEGFAPELFTVDRIGTE 113 Query: 99 RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMK 158 + + + PT E ++ ++ + SYR+LPF YQ FR ELR + +R+ EF Sbjct: 114 QLTEPYVLRPTSETIIGYMWSGWLNSYRDLPFLHYQWGSVFRAELRTK-AFLRTSEFYWH 172 Query: 159 DAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 + ++ + E ++ ++ DL HEF Sbjct: 173 EGHTAHASEEEARREVRQIL--------------------------DLYHEF-------- 198 Query: 219 TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 +D + P+ + + E++ A S E Sbjct: 199 -----CRDILALPV---------VRGEKTASERFAGAVATYS-----------IEGMMRD 233 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G +S F+ + ++ Y S+ I + R++ A+I + D G+ Sbjct: 234 GKALQSGTSHYLGQNFSKAFDVKFQTREQREEYAYTTSWAISS-RIIGAIIMTHGDDFGL 292 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 I P +AP ++ +I + + DQ+ + EK+ L G V D G G ++ Sbjct: 293 IMPPRIAPIQVVVIPVSRKENFDQMVAEG-EKLAHELRAQGLRVKVDRREGVTNGFKYND 351 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +L G P+++ +G + + V +K+R +E + EE I ++R + Sbjct: 352 WELKGVPVRIELGPRDLEQGVVVVKNRNAEEKETLPREEAIRGMANRLDS 401 >gi|160943086|ref|ZP_02090323.1| hypothetical protein FAEPRAM212_00565 [Faecalibacterium prausnitzii M21/2] gi|158445555|gb|EDP22558.1| hypothetical protein FAEPRAM212_00565 [Faecalibacterium prausnitzii M21/2] gi|295104698|emb|CBL02242.1| prolyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3] Length = 479 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 82/155 (52%), Gaps = 2/155 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G YFG K+S TF G D + H+ S+G+ + R+V A+I + D G+I Sbjct: 227 KALQSGTSHYFGDKFSKAYDVTFTGRDNQLHHPFQTSWGV-STRLVGAIIMTHGDDDGLI 285 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 P ++AP ++ ++ I AH + ++ ++SK V DD G +FA ++ G Sbjct: 286 LPPAIAPIQVVVVPIAAHKPGVSEKAAELAEKISKYA-RVKLDDSDNAPGWKFAQWEMKG 344 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 PL++ +G K + ++ + R T + +SL+E+ Sbjct: 345 VPLRLEIGPKDLEKNQCVLVRRDTREKVFVSLDEL 379 >gi|159042526|ref|YP_001541778.1| prolyl-tRNA synthetase [Caldivirga maquilingensis IC-167] gi|259511577|sp|A8MC04|SYP_CALMQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157921361|gb|ABW02788.1| prolyl-tRNA synthetase [Caldivirga maquilingensis IC-167] Length = 481 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 3/147 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + Y G +S + G DG+ HY+ SYGI + R++A++I + D +G+ Sbjct: 223 GRTMQIGTVHYLGENFSRVFDVKYLGKDGQMHYIHTTSYGI-SERIIASMIAVNGDDRGL 281 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVAD 396 + P AP ++ +I I DQ + + + L G V DD ++ G ++ + Sbjct: 282 LLPPRYAPIQVVVIPIMYGEDQSVLNYAKGVSGELLNAGVRVHVDDRRDKTPGWKYYHWE 341 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLT 423 L G P+++ VG V D+ V + R T Sbjct: 342 LKGVPIRLEVGPSDVKDNAVTLTRRDT 368 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 4/158 (2%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG Y W P G NV A+IR + TG E+ P + + ES + E+ Sbjct: 37 KGAYIWRPYGVAIRRNVEALIRRLHDETGHQEVLFPVFIPYEFFSKESEHIRGFESEVFW 96 Query: 96 LADRN--DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 ++ ++ ++ PT E M +F+ I+ + +LP YQI FR E + ++R R Sbjct: 97 VSKGTGGEERLVLRPTSETAMMPMFKLWIRDHTDLPLRVYQIVSVFRAETKMTHPMIRLR 156 Query: 154 EFLM-KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 E M K+A++ + ++ + Y RI L + Sbjct: 157 EISMFKEAHTAHADRDDAERQVKEAVGIYRRIMDELCI 194 >gi|255280775|ref|ZP_05345330.1| threonine--tRNA ligase [Bryantella formatexigens DSM 14469] gi|255268712|gb|EET61917.1| threonine--tRNA ligase [Bryantella formatexigens DSM 14469] Length = 642 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 102/418 (24%), Positives = 172/418 (41%), Gaps = 61/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ G +LP G + + RE + G +E+S P + + LW SG +D Y Sbjct: 253 MMRDEGPGFPFFLPNGMIVKNALLDYWREIHRKAGYVEISTPIMLNRQLWETSGHWDHYR 312 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M + D D A+ P + +++S +SYR+LP +I L R E + G Sbjct: 313 ENMYTTVIDDTDFAI--KPMNCPGGILVYQSEPRSYRDLPLRMGEIGLVHRHEKSGQLHG 370 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGD 205 +MR R F DA+ F +TPE + ++ G K + R E+ +G D Sbjct: 371 LMRVRCFNQDDAHIF-MTPEQICDEIKGVVKLIDEVYQLFGFKYHVELSTRPENS-MGSD 428 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT-APYAATSDVHN 264 E +A G D + L+ +V + A Y D H Sbjct: 429 EDWE---MATDGLRSAL------------------DDLGLDYVVNEGDGAFYGPKIDFHL 467 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLPM--SATFKGADGKDHY-VQMGSYG 318 E DS +G + GT + LP+ + + GADG+ H + + Sbjct: 468 E---DS-------------IGRTWQCGTIQLDFQLPLRFNCEYIGADGEKHRPIMIHRVV 511 Query: 319 IGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ R + +IE +P ++P ++ ++ I D+ D +K+ A L++ G Sbjct: 512 FGSVERFIGILIEHFAGA----FPTWLSPEQVRVLPIS--DKYL-DYADKVNAALNENGI 564 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + A L P ++VG+K D KV ++ R G +L++ I Sbjct: 565 RSSVDTRAEKIGYKIREARLAKVPYMLVVGAKEEEDGKVSVRSRFLGDEGQKNLDDFI 622 >gi|83590594|ref|YP_430603.1| threonyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] gi|83573508|gb|ABC20060.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Moorella thermoacetica ATCC 39073] Length = 633 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 94/420 (22%), Positives = 159/420 (37%), Gaps = 47/420 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H+ G + G + + REE R G +E+ P + S LW +SG +D Y + Sbjct: 254 LHEEGPGFPFFHHKGMIIRNELEQFWREEHRRAGYLEIRTPVILSRTLWEQSGHWDHYRE 313 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + ++++ SYR+LP ++ L R E G+ Sbjct: 314 NMYFTKIDGADYAI--KPMNCPGAILVYKTEQHSYRDLPLRLAELGLVHRHEKSGVLHGL 371 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F D++ F + P + R ++ G K + + P S E Sbjct: 372 MRVRAFTQDDSHIF-MLPSQIASEIQGVIDLVDRFYNLFGFK-YHVELSTRPDNAMGSEE 429 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 A + Q +K M + + + F Y D H E D Sbjct: 430 IWETATSALRQALEAKG-MPYAVNEGDGAF----------------YGPKIDFHLE---D 469 Query: 270 SLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVV 325 SL R + G I F K+ L T+ G DG+ H V + G++ Sbjct: 470 SL-------GRTWQCGTIQLDFLMPEKFDL----TYIGEDGQKHRPVMIHRVVFGSIERF 518 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP ++ ++ I D K+ A L + G +D Sbjct: 519 IGILIEHYGGSFPVW---LAPVQVRVLPITDRHN---DYAFKVRAELIRAGIRAEVNDRN 572 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++IG + A + P ++VG K ++ V ++ R G + L E I + S Sbjct: 573 DKIGYKIRAAQMEHIPYMLVVGDKEAAEGTVAVRERQAGDTGRVPLAEFIARVTREISRR 632 >gi|229815156|ref|ZP_04445493.1| hypothetical protein COLINT_02202 [Collinsella intestinalis DSM 13280] gi|229809386|gb|EEP45151.1| hypothetical protein COLINT_02202 [Collinsella intestinalis DSM 13280] Length = 595 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 95/402 (23%), Positives = 159/402 (39%), Gaps = 56/402 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ + G +LP G + + RE ++ G +E+S P + + LW+ SG +D Y Sbjct: 215 MMRDEAPGFPFFLPNGMVLKNTLLDYWREIHHKAGYVEISTPQIMNKSLWLTSGHWDHYK 274 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M +D+ P + ++ S SYR LP +I L R ELR G+ Sbjct: 275 DNMYSTM-IDDEEYCIKPMNCPGGVLVYSSKPHSYRELPIRAGEIGLVHRHELRGALHGL 333 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 R R F DA+ F +TPE + ++ + G K + R E +G D Sbjct: 334 FRVRCFNQDDAHLF-VTPEQLTDEIVGVVRLIDSVYQKFGFKYHVELSTRPEDS-MGSD- 390 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E A+ G +V K MD+ + + F Y D H E Sbjct: 391 --EDWAAAEEG-LKVALDKLGMDYVVNEGDGAF----------------YGPKIDFHLE- 430 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLPMS--ATFKGADG-KDHYVQMGSYGIG 320 DSL G + GT + +P + T+ ADG K + + G Sbjct: 431 --DSL-------------GRTWQCGTVQLDFQMPQNFDLTYVDADGEKKRPIMLHRVCFG 475 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ + GK +W +AP ++ ++ + + RD ++ +L G V Sbjct: 476 SIERFIGILIEHYAGKFPVW---LAPMQVKVLPVS---EKSRDYAHQVTEQLEAAGIRVV 529 Query: 381 WDDMGEQIGSQFAVADLLG-FPLQVIVGSKFVSDSKVEIKHR 421 DD E+IG + A + P +I+G K V + ++ R Sbjct: 530 CDDRDEKIGYKIREARGVDRVPYMLILGEKEVEAGNISVRDR 571 >gi|218961058|ref|YP_001740833.1| threonyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans] gi|167729715|emb|CAO80627.1| threonyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans] Length = 633 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 94/401 (23%), Positives = 146/401 (36%), Gaps = 39/401 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +E+ + G + P L A+LW SG D Y + M Sbjct: 262 GLVLWHPKGAMVRHLIETYWKEQHLKKGYQLVYTPHLGRANLWETSGHLDFYKENMYSKM 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + P + I+ S + SYR LP ++ +R E G+MR R F Sbjct: 322 DIEGQDYYIKPMNCPFHISIYNSSLHSYRELPIRLAELGTVYRYERSGVLHGLMRVRGFT 381 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ TPE +K+ V L + G K EF++ T Sbjct: 382 QDDAHII-CTPEQMDMEVDKLIVFSLDMLKAFGFK-----------------EFLIYLAT 423 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 K+ D S + + E A Y D+ K+ D+L Sbjct: 424 KPDDCVGEKEDWDKATASLANSLQKLGLEYKVDEGGGAFYGPKIDI---KIKDAL----- 475 Query: 277 VSARGIEVGHI-FYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHD 334 R + I F F M T+ GAD H M + G++ A + H Sbjct: 476 --GRAWQCTTIQFDFNEPERFDM--TYIGADNSAHRPYMIHRAVLGSVERFFATLLEYHS 531 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 G +W +AP +I LI I + KI +L + G D E++G + Sbjct: 532 GNLPLW---LAPVQIMLIPIT---DAQLNYARKIEEQLLEQGFRCELDSRSEKMGYKIRS 585 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A+ P I+G ++++V ++ G M+LE I Sbjct: 586 AEKNKIPFMCILGKNEENNNQVTLRQHTVGDLGAMNLEAAI 626 >gi|46907789|ref|YP_014178.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47093096|ref|ZP_00230873.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|217964294|ref|YP_002349972.1| threonyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|226224160|ref|YP_002758267.1| threonyl-tRNA synthetase [Listeria monocytogenes Clip81459] gi|254824382|ref|ZP_05229383.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|254852182|ref|ZP_05241530.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|254931499|ref|ZP_05264858.1| threonyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|255520160|ref|ZP_05387397.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-175] gi|290893960|ref|ZP_06556936.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|300764775|ref|ZP_07074765.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|67461796|sp|Q71ZA9|SYT_LISMF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783526|sp|B8DHI9|SYT_LISMH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|259516560|sp|C1KVK6|SYT_LISMC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|46881058|gb|AAT04355.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47018536|gb|EAL09292.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|217333564|gb|ACK39358.1| threonyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|225876622|emb|CAS05331.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605487|gb|EEW18095.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|290556498|gb|EFD90036.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|293583051|gb|EFF95083.1| threonyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293593617|gb|EFG01378.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|300514451|gb|EFK41508.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|307571140|emb|CAR84319.1| thrS [Listeria monocytogenes L99] gi|313608610|gb|EFR84472.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL F2-208] gi|328465594|gb|EGF36823.1| threonyl-tRNA synthetase [Listeria monocytogenes 1816] gi|332312001|gb|EGJ25096.1| Threonyl-tRNA synthetase [Listeria monocytogenes str. Scott A] Length = 640 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 86/403 (21%), Positives = 169/403 (41%), Gaps = 36/403 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ R G + P + + +L+ SG +D Y ++M Sbjct: 260 QGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPT 319 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P + I+++ I SYR LP ++ + R E+ G+ R R Sbjct: 320 MKMDNEELVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ L ++ +K R LS+ D Sbjct: 380 TLNDAHVF-VRPDQIKDEFKRVVELILEVYKDFDIKDYSFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M + D + ++ E A Y DV ++ ++ + Sbjct: 425 PKNTEKYFDDDAMWEKAQAMLKSAMDEMEMDYFEAEGEAAFYGPKLDV---QVKTAIGKE 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DG+ H + G+ + R VA +IE Sbjct: 482 ETLSTVQLD----FLLPERFDL----TYIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY 533 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ LI + A + D + + +L + G DD E++G + Sbjct: 534 ---KG-AFPTWLAPVQMELIPVNADAHL--DYAKGVQDKLQRAGLRAEVDDRNEKLGYKI 587 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A P +++G + V V ++ + E M L+ I Sbjct: 588 REAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFI 630 >gi|30264646|ref|NP_847023.1| threonyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47530117|ref|YP_021466.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187467|ref|YP_030719.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|49481700|ref|YP_038622.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140935|ref|YP_085897.1| threonyl-tRNA synthetase [Bacillus cereus E33L] gi|65321944|ref|ZP_00394903.1| COG0441: Threonyl-tRNA synthetase [Bacillus anthracis str. A2012] gi|165871455|ref|ZP_02216102.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167636725|ref|ZP_02395009.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167642081|ref|ZP_02400304.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170689721|ref|ZP_02880895.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170708708|ref|ZP_02899146.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177653139|ref|ZP_02935426.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|196042361|ref|ZP_03109631.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99] gi|218905803|ref|YP_002453637.1| threonyl-tRNA synthetase [Bacillus cereus AH820] gi|225866553|ref|YP_002751931.1| threonyl-tRNA synthetase [Bacillus cereus 03BB102] gi|227817360|ref|YP_002817369.1| threonyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|228917215|ref|ZP_04080772.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929623|ref|ZP_04092641.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935883|ref|ZP_04098693.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948301|ref|ZP_04110584.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229093673|ref|ZP_04224773.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|229124142|ref|ZP_04253334.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201] gi|229186832|ref|ZP_04313987.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|229601552|ref|YP_002868855.1| threonine--tRNA ligase [Bacillus anthracis str. A0248] gi|254686931|ref|ZP_05150789.1| threonyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254720893|ref|ZP_05182684.1| threonyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254736684|ref|ZP_05194390.1| threonyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254741722|ref|ZP_05199409.1| threonyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254754681|ref|ZP_05206716.1| threonyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254757513|ref|ZP_05209540.1| threonyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|30259321|gb|AAP28509.1| threonine--tRNA ligase [Bacillus anthracis str. Ames] gi|47505265|gb|AAT33941.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181394|gb|AAT56770.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|49333256|gb|AAT63902.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974404|gb|AAU15954.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus E33L] gi|164712752|gb|EDR18282.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167509956|gb|EDR85379.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167527843|gb|EDR90677.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170126388|gb|EDS95277.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170666324|gb|EDT17113.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172081663|gb|EDT66734.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|196026805|gb|EDX65442.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99] gi|218536622|gb|ACK89020.1| threonyl-tRNA synthetase [Bacillus cereus AH820] gi|225787158|gb|ACO27375.1| threonine--tRNA ligase [Bacillus cereus 03BB102] gi|227005330|gb|ACP15073.1| threonine--tRNA ligase [Bacillus anthracis str. CDC 684] gi|228596569|gb|EEK54234.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|228659444|gb|EEL15092.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228689760|gb|EEL43567.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228811288|gb|EEM57626.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823651|gb|EEM69473.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830010|gb|EEM75629.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842416|gb|EEM87507.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265960|gb|ACQ47597.1| threonine--tRNA ligase [Bacillus anthracis str. A0248] Length = 645 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 175/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPEDTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 ++ G DGK H + G+ + R VA +IE KG +P +AP ++ +I + Sbjct: 506 ---SYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|154687027|ref|YP_001422188.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42] gi|166223321|sp|A7Z7I1|SYT_BACA2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|154352878|gb|ABS74957.1| ThrS [Bacillus amyloliquefaciens FZB42] Length = 643 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 92/406 (22%), Positives = 164/406 (40%), Gaps = 36/406 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S DL+ SG +D Y M Sbjct: 264 QGLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTPVLGSKDLYETSGHWDHYQDTMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I++ I SYR LP ++ R E+ G+ R R Sbjct: 324 MEMDNETLVLRPMNCPHHMMIYKQDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + + ++ GL R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKEEFIRTVRLIQDVYEDFGLNDYTFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSE-NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M S D++ E A Y DV ++ ++ + Sbjct: 429 PEDTEKYFDDDEMWNKAQSMLKAAMDEMGHDYYEAEGEAAFYGPKLDV---QVKTAIGKE 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPERFDL----TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIE-E 536 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 H G W +AP + +I + V D +K+ RL + G V D E+IG + Sbjct: 537 HKGALPTW---LAPVQFQVIPVSP--SVHLDYAKKVQERLQREGLRVELDSRDEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A + P ++VG + + V ++ E +SL++ + A Sbjct: 592 REAQMQKIPYMLVVGDQEAENGAVNVRKYGEQKSETVSLDDFVKKA 637 >gi|257875532|ref|ZP_05655185.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257809698|gb|EEV38518.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 646 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 90/416 (21%), Positives = 172/416 (41%), Gaps = 48/416 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + + DL+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMANVDLYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + D ++F + P+ K + + + ++ + R + P D + + Sbjct: 382 TLNDGHTF-VRPDQIKEEFKRTLDLMIGVYEDFNITDYRFRLSYRDPQNKDKYFDDDAMW 440 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + +T + + D ++ D+ + E A Y DV ++ +L Sbjct: 441 ENAQTMLKAAMDELEL-------DYFE-------AEGEAAFYGPKLDV---QVKTALGME 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++++ V + + M A + Sbjct: 484 ETLSTIQLD----FLLPERFDL----TYVGEDGENNHRPVVIHRGIVSTMERFVAYLTEV 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + S+I +++AH D +I RL G V DD E++G Sbjct: 536 YKGAFPTW---LAPIQASIIPVSVEAHS----DYAYEIKERLQAQGLRVEVDDRNEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIRE-----DMSLEEVINYA 438 + + P Q++VG + V+D+ V I+ + T + E D EV NY+ Sbjct: 589 KIRASQTQKIPYQIVVGDQEVNDATVNIRRYGSKETQVEELNLFVDAMAAEVKNYS 644 >gi|194017082|ref|ZP_03055694.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194010950|gb|EDW20520.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 646 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 92/406 (22%), Positives = 167/406 (41%), Gaps = 36/406 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ R G + P L + +L+ SG + Y ++M + Sbjct: 267 QGLPLWLPKGATIRRVIERYIVDKEVRLGYEHVYTPVLANVELYKTSGHWAHYQEDMFPV 326 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I+++ SYR LP ++ R E+ G+ R R Sbjct: 327 MEMDNEDLVLRPMNCPHHMMIYKNEPHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 386 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + + ++ GL R LS+ D Sbjct: 387 TLNDAHIF-VRPDQIKDEFIRTVRLIEEVYQDFGLNDYTFR---------LSYR-----D 431 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M S D D + + E A Y DV ++ +L + Sbjct: 432 PEDTEKYFDDDAMWNKAQSMLKDAMDELGHDYYEAEGEAAFYGPKLDV---QVKTALGKE 488 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 489 ETLSTVQVD----FLLPERFDL----TYIGEDGKHHRPVVIHRGVVSTMERFVAFLIEEY 540 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG + P +AP + +I + V D +K+ RL G V D E+IG + Sbjct: 541 ---KGAL-PTWLAPVQFQVIPVSP--SVHLDYAKKVQERLQLEGLRVELDSRDEKIGYKI 594 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A + P ++VG + + V ++ E M LE + +A Sbjct: 595 REAQMQKIPYMLVVGDQEAENGAVNVRKYGEQDSETMDLEAFVKHA 640 >gi|124025364|ref|YP_001014480.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] gi|166225477|sp|A2C155|SYT_PROM1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123960432|gb|ABM75215.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] Length = 640 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 91/428 (21%), Positives = 161/428 (37%), Gaps = 77/428 (17%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL + + H + + G+ W P G + IRE ++ E+ P Sbjct: 237 EAEKRDHRKLGKKLSLFHFQEEAPGMIFWHPNGWTIYRVLQDFIRETISKYDYQELKSPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG +D + ++M N + I P + +F +KSYR+LP Sbjct: 297 IVCRSLWEKSGHWDKFKEDMFTTTSENKEYAI-KPMNCPCHVQVFNQGLKSYRDLPIRLS 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F+ D + F T E + ++ G S Sbjct: 356 EFGSCHRNEPSGALHGLMRVRNFVQDDGHIF-CTNEQIQEEVQSFIDLVFEVYKAFGFNS 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 I ++ + P + DD+ W Sbjct: 415 ILIKLSTR--------------------------------PEKRVGSDDV---------W 433 Query: 253 TAPYAATSDVHNEKLFD--SLPENKRVSARGIE------VGHIFYFGT---KYSLP--MS 299 A SD + K D LP IE + ++ GT +S+P ++ Sbjct: 434 DKSEKALSDALDSKGLDWSLLPGEGAFYGPKIEFSLKDCLNRVWQCGTIQVDFSMPERLN 493 Query: 300 ATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 +++ DGK H +GS+ R + +IE ++ G IW + P +I ++ Sbjct: 494 SSYIDVDGKKQPPVMLHRAILGSFE----RFIGILIE-NYSGNLPIW---LCPLQIVVMG 545 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I + DAC ++L K G D E++G + + P +I+G K + Sbjct: 546 ITDRNN---DACLDTKSKLIKYGFRASVDTRNEKVGFKIREHTMQRIPFLIIIGDKEEEN 602 Query: 414 SKVEIKHR 421 +++ ++ R Sbjct: 603 NEISVRTR 610 >gi|33322957|gb|AAQ07215.1|AF496523_1 prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis] Length = 105 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 35/81 (43%), Positives = 49/81 (60%) Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 DE RPRFG++R REF+M D YSF + E ++ +YL+IF R G++ P+ A+SG Sbjct: 1 DENRPRFGLLRGREFVMLDGYSFAASQEQLDKQFDNEKAAYLKIFKRTGVEVRPVIADSG 60 Query: 201 PIGGDLSHEFIVLADTGETQV 221 +GG S EF A GE + Sbjct: 61 TMGGKNSIEFQAPAAVGEDTI 81 >gi|326795752|ref|YP_004313572.1| threonyl-tRNA synthetase [Marinomonas mediterranea MMB-1] gi|326546516|gb|ADZ91736.1| threonyl-tRNA synthetase [Marinomonas mediterranea MMB-1] Length = 638 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 93/427 (21%), Positives = 162/427 (37%), Gaps = 58/427 (13%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L I + RD KL L + + + G+ W P G + V +R++Q Sbjct: 232 YLLRIEEAEKRDHRKLGKKLDL--FHVQEEAPGMVFWHPKGWRLYQAVEQYMRQKQLDNN 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG + Y + M N + P + ++ +KSY Sbjct: 290 YQEVKTPQIVDRVLWEKSGHWGKYQENMFTTHSENRDYAV-KPMNCPCHIQVYNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-R 183 R+LPF + R+E G+MR R F+ D + F E S F+ L Sbjct: 349 RDLPFRMAEFGSCHRNEPSGALHGIMRVRNFVQDDGHIF--VTENQIQSEVSEFIKLLHE 406 Query: 184 IFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G +I R + P +G D + D E + D Sbjct: 407 VYADFGFDNIIYRLSTRPEQRVGSD------EVWDKAEKAL---------------ADAL 445 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP 297 D+ L +W + K+ SL + +G ++ GT +S+P Sbjct: 446 DVAGL-----EWEE-LPGEGAFYGPKIEFSLKD---------AIGRVWQCGTIQVDFSMP 490 Query: 298 --MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + A + DG + V + +G++ ++ +G +W +AP ++ ++NI Sbjct: 491 TRLGAQYVSEDGSRQTPVMLHRAIVGSLERFIGILIEETEGSFPLW---LAPEQVVIMNI 547 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + CE + L+ G D E+IG + L P ++VG K V + Sbjct: 548 TDRQT---EYCENLEKTLNSNGFRAKLDLRNEKIGFKIREHTLQRIPYLIVVGDKEVENG 604 Query: 415 KVEIKHR 421 KV ++ R Sbjct: 605 KVAVRTR 611 >gi|291543417|emb|CBL16526.1| prolyl-tRNA synthetase [Ruminococcus sp. 18P13] Length = 485 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/341 (20%), Positives = 131/341 (38%), Gaps = 69/341 (20%) Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRS 152 +L DR + PT E + + + + + SYR+LP + Q +++ RP +RS Sbjct: 105 KLEDR----LCVRPTSETLFCEHYANIVHSYRDLPKLYNQWVSVVRWEKTTRP---FLRS 157 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 REFL ++ ++ T + + +M Y Sbjct: 158 REFLWQEGHTIHATAQEAIEETERMLNVY------------------------------- 186 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 AD FC I T+ D A YA + +H+ Sbjct: 187 -AD------FCEHSLAMPVIKGRKTESDKFAGA-------VATYAIEALMHD-------- 224 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 + ++ G YFG ++ + + K S+G+ R++ A+I + Sbjct: 225 ------GKALQAGTSHYFGDGFAKAFDIEYTDKENKRVNPHQTSWGV-TTRLIGAIIMTH 277 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D G++ P +VAP + ++ I H + + ++ L G V DD G +F Sbjct: 278 GDNSGLVLPPAVAPIQAVIVPIAQHKEGVLEKANQLAEALKAQGIRVKLDDSDNSPGWKF 337 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 A ++ G P+++ +G K + S+ + R G ++ ++L+E Sbjct: 338 AEYEMKGVPVRIEIGPKDIEQSQCIVATRYNGEKQPVALDE 378 >gi|299822779|ref|ZP_07054665.1| threonine--tRNA ligase [Listeria grayi DSM 20601] gi|299816308|gb|EFI83546.1| threonine--tRNA ligase [Listeria grayi DSM 20601] Length = 640 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 88/406 (21%), Positives = 171/406 (42%), Gaps = 40/406 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I + + R G + P + D + +SG +D Y ++M Sbjct: 260 QGLPLWLPKGATIRRVIERYIVDREERLGYSHVYTPIMAKVDFYKQSGHWDHYHEDMFPP 319 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P + ++++ I SYR LP ++ L R E+ G+ R R Sbjct: 320 MKMDNEELVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGLMHRYEMSGALSGLQRVRGM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ L ++ + R LS+ D Sbjct: 380 TLNDAHVF-VRPDQIKDEFKRVLELILAVYKDFDITDYKFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M + D D + ++ E A Y DV ++ ++ + Sbjct: 425 PENTEKYFDDDAMWEKAQTMLKDAMDEMEMDYFEAEGEAAFYGPKLDV---QVKTAIGKE 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DG+ H + G+ + R VA +IE Sbjct: 482 ETLSTVQLD----FLLPERFDL----TYIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY 533 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ +I N AH D +++ +L + G V DD E++G Sbjct: 534 ---KG-AFPTWLAPIQMQIIPVNRDAH----FDYAKEVEDKLVRAGLRVEIDDRNEKLGY 585 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + A P ++VG + + V I+ + E +S+++ I Sbjct: 586 KIREAQTQKIPYALVVGDQESENGTVNIRRYGSKDSETLSVDDFIK 631 >gi|193216362|ref|YP_001997561.1| prolyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] gi|259511584|sp|B3QYP1|SYP_CHLT3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|193089839|gb|ACF15114.1| prolyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] Length = 481 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/328 (21%), Positives = 136/328 (41%), Gaps = 65/328 (19%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ I+SYR+LP Q R E+R R +R+ EFL ++ ++ T Sbjct: 108 PTSETIIWSSYKKWIQSYRDLPILINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHATE 166 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 +K +M Y R F ++++ Sbjct: 167 TEAKEEVLRMIEVY-RHF--------------------------------------AEEY 187 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 M P+ I+ + + E++ + H +++ ++ + ++ G Sbjct: 188 MAIPV---------IVGMKTESEKF-------AGAHETFCIEAMMQD----GKALQAGTS 227 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + G ++ F+ DG YV S+G+ + R++ A+I + D KG++ P +A Sbjct: 228 HHLGQNFAKAFDCKFQTKDGSLEYVWASSWGV-STRLIGALIMAHSDDKGLVLPPKLASR 286 Query: 348 KISLINIKAHDQ--VCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVADLLGFPLQV 404 + ++ I D+ V A E + L G VF DD + G +FA +L G P+++ Sbjct: 287 QAVIVPILKGDKAAVLEKAVE-LEKMLKAAGVQVFLDDSEQNTPGWKFAEYELQGIPVRI 345 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +G + V+ K + R T +E + ++ Sbjct: 346 ELGPRDVAAGKCVVARRDTSEKETLEID 373 >gi|218259669|ref|ZP_03475318.1| hypothetical protein PRABACTJOHN_00977 [Parabacteroides johnsonii DSM 18315] gi|218224962|gb|EEC97612.1| hypothetical protein PRABACTJOHN_00977 [Parabacteroides johnsonii DSM 18315] Length = 651 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 95/413 (23%), Positives = 156/413 (37%), Gaps = 65/413 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ WLP G + + ++ Q + G ++ P + L+V SG Y YGK+ + Sbjct: 262 GLPLWLPRGTQLRLKLEDFLKRIQKKYGYQQVMTPHIGGKQLYVTSGHYAKYGKDSFQPI 321 Query: 97 -ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + + P + +IF+S +SY++LP F + +R E G+ R R Sbjct: 322 HTPQEGEEFLLKPMNCPHHCEIFKSFPRSYKDLPLRFAEFGTVYRYEQSGELHGLTRVRG 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F P+ K + K+ IF L ++ + I L Sbjct: 382 FTQDDAHLF-CRPDQLKDEFLKVMDIIFIIFKALDFENFEAQ--------------ISLR 426 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D K D I SE E W +A + EK + E Sbjct: 427 D---------KVNRDKYIGSE--------------ENWEKAESAIIEACQEKGLKAKIEY 463 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 + G + +G + GT Y+LP + G D K H V + G Sbjct: 464 GEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYTGEDNKKHRPVMIHRAPFG 523 Query: 321 AMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +M AV+ GK +W PD V+ IS + D ++ +L Sbjct: 524 SMERFVAVLIEHTGGKFPLWLTPDQVSILPIS--------EKFNDYAYEVKRQLEAEDLS 575 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 V DD E+IG + +L P +IVG K +++V ++ + G + M + Sbjct: 576 VLVDDRNEKIGRKIRDTELKRIPYMLIVGEKEAENNEVSVRKQGEGDKGSMKI 628 >gi|90579635|ref|ZP_01235444.1| threonyl-tRNA synthetase [Vibrio angustum S14] gi|90439209|gb|EAS64391.1| threonyl-tRNA synthetase [Vibrio angustum S14] Length = 643 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 91/422 (21%), Positives = 160/422 (37%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G + IRE+ N E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWTIFRELEVFIREKLNEYDYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + + + + Y + G +I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIFCTEAQVQQEVTSCIEMVY-DTYKTFGFDNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E+ + + + M+ P I E A Y + L Sbjct: 433 ----AMWDKAESDLITALESMEIPF--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + ++LP + AT+ G D + H M I G++ Sbjct: 472 HDCLD-------RAWQCGTV---QLDFALPERLGATYVGEDNERHTPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI + ++I +L K G V D Sbjct: 522 FIGILIEDYAG---FFPTWLAPQQAVVMNIT---DAQSEYVQEIVEKLKKCGIRVNADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++ G K V V ++ R ++E++ + S+ Sbjct: 576 NEKIGFKIREHTLKRVPFMLVCGDKEVEAGVVAVRTRKGKDLGKFKIDELVAFMQEEISS 635 Query: 445 NR 446 + Sbjct: 636 RK 637 >gi|161831126|ref|YP_001597175.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 331] gi|161762993|gb|ABX78635.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 331] Length = 660 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 104/440 (23%), Positives = 169/440 (38%), Gaps = 77/440 (17%) Query: 17 DAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+L+ + + H S G W P G + + IR+ ++ G E+ P Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRQITHKYGYQEVHTPQ 305 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 L A LW +SG + +G ++ L + +I P IF +KSYR+LP + Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSLPLEPQQYVI-KPMSCPAHVQIFNQGVKSYRDLPLRYA 364 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F+ DA+ F E S F+ L Sbjct: 365 EFGACHRNEPSGTLHGLMRLRGFVQDDAHIF--CTEDQIQSEVSAFIDQL---------- 412 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 HE V AD G T+V P + D++ W Sbjct: 413 ---------------HE--VYADFGFTEVIHKLSTR----PEKRVGSDEV---------W 442 Query: 253 TAPYAATSDVHNEK--LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MS 299 T A ++ N K +D LP IE +G I+ GT +S+P + Sbjct: 443 TKAEQALAEALNRKGVEWDILPGEGAFYGPKIEFSLRDCLGRIWQCGTVQVDFSVPERLG 502 Query: 300 ATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 A + DG H +GS+ R + ++E S GK +W +AP ++ ++N Sbjct: 503 AHYIAEDGSKKPPVMIHRAILGSF----ERFLGILLEESA-GKLPLW---LAPVQVVVMN 554 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I D + L +G D E+IG + + P V++G + V+D Sbjct: 555 ITDRQA---DYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVAD 611 Query: 414 SKVEIKHRLTGIREDMSLEE 433 + ++ ++LEE Sbjct: 612 KTLSVRALEDEASTTITLEE 631 >gi|73667547|ref|YP_303563.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ehrlichia canis str. Jake] gi|123745825|sp|Q3YQP0|SYT_EHRCJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|72394688|gb|AAZ68965.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ehrlichia canis str. Jake] Length = 633 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 88/410 (21%), Positives = 158/410 (38%), Gaps = 46/410 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G W G + IR++ G IE+ P L + +LW +SG +D + + Sbjct: 255 IQNEACGQVFWHKKGWTIYRTIENYIRKKLETNGYIEVKTPMLLNKELWEKSGHWDKFRE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M L++ DK + P + IF S I+SYR+LP + + R E G+M Sbjct: 315 NMF-LSEAEDKVLAIKPMNCPCHIQIFNSKIRSYRDLPIRMAEFGICHRYEASGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGGDLSHE 209 R R F DA+ F E S F + L ++ G +I ++ P S E Sbjct: 374 RVRGFTQDDAHIF--CTESQVISEALKFCNLLMEVYKDFGFTNILVKFSDRPENRAGSDE 431 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFD---DIISLNSIVEQWTAPYAATSDVHNEK 266 A++ + + + P + + + + ++I +W V Sbjct: 432 TWDRAESALKKSVEAANLNYVLNPGDGAFYGPKLEFVLKDAIGREWQCGTLQMDFV---- 487 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVV 325 LPE + A + G+DGK H+ M I G Sbjct: 488 ----LPER-----------------------LGAYYVGSDGKKHHPIMLHRAILGTFERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H GK IW +AP ++S++ I + + + + + V D Sbjct: 521 IGILIEHHSGKFPIW---LAPTQLSILTI---SEESIEYANSLKTKAEEHNIRVELDATN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+I + P+ IVG K V+++ V I++ + ++ M +++ + Sbjct: 575 EKINYKIRNHIHKKIPVFWIVGKKEVNENSVSIRYLESNTQQVMPIDKAL 624 >gi|291535587|emb|CBL08699.1| prolyl-tRNA synthetase, family I [Roseburia intestinalis M50/1] Length = 479 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/329 (20%), Positives = 130/329 (39%), Gaps = 66/329 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + D +++ I+SYR+LP + Q +++ E RP +RSREFL ++ + Sbjct: 114 PTSETLFCDFYKNIIQSYRDLPKVYNQWCSVVRWEKETRP---FLRSREFLWQEGH---- 166 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 T + + V L ++ + + M +V E + F Sbjct: 167 TAHATAEEAEQRTVQMLNVYADFCEEVLAMP--------------VVRGQKTEKEKFAGA 212 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 + A Y + +H+ K S G Sbjct: 213 E---------------------------ATYTIEALMHDGKALQS--------------G 231 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 FG ++ + D K YV S+G+ R++ A+I D G++ P +A Sbjct: 232 TSHNFGNGFAKAFGIQYTDKDNKLQYVYQTSWGM-TTRLIGAIIMVHGDDSGLVLPPRIA 290 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P + +I I+ D +++ R+ KV C DD + G +F+ ++ G P+++ Sbjct: 291 PVQAMVIPIQQQKDGVLDTAKEVCERIGKV-CRAKLDDSDKSPGWKFSEQEMRGIPVRIE 349 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G K ++ K R T + +++L+E+ Sbjct: 350 LGPKDIAAGKCVAVRRDTREKIEIALDEL 378 >gi|288928013|ref|ZP_06421860.1| threonine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] gi|288330847|gb|EFC69431.1| threonine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] Length = 654 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 96/419 (22%), Positives = 154/419 (36%), Gaps = 71/419 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R+ Q R G E+ P + S +L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTELRLRLQNMLRKIQKRFGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + ++F +SY++LP + +R E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEVFAWKPRSYKDLPLRIAEFGTVYRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNK---MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 F DA+ F PE K+ + + + + +IFH D Sbjct: 383 SFTQDDAHIF-CRPEQVKNEFLRVMDIIQAVFKIFHF-----------------DDFEAQ 424 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 I L D T + D E W A D EK D+ Sbjct: 425 ISLRDPKNTTKYIGSD-----------------------EVWEESEQAIIDACKEKGLDA 461 Query: 271 LPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGS 316 + G + +G + GT Y+LP + D K V + Sbjct: 462 KIAYGEAAFYGPKLDFMIKDAIGRRWQLGTIQVDYNLPERFKLEYTAEDNTKKTPVMVHR 521 Query: 317 YGIGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G+M AV+ G +W PD VA IS + D +++ Sbjct: 522 APFGSMERFTAVLIEHTAGHFPLWLIPDQVAILPIS--------EKYNDYAQRVAKYFDS 573 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 VG D E+IG + ++ P V+VG K ++ V ++ + G + MS+EE Sbjct: 574 VGVRATLDVRNEKIGRKIRDNEIKRVPYMVVVGEKEAAEGLVSMRKQGGGEQATMSMEE 632 >gi|157693298|ref|YP_001487760.1| threonyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|157682056|gb|ABV63200.1| threonine--tRNA ligase [Bacillus pumilus SAFR-032] Length = 646 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 92/406 (22%), Positives = 167/406 (41%), Gaps = 36/406 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ R G + P L + +L+ SG + Y ++M + Sbjct: 267 QGLPLWLPKGATIRRVIERYIVDKEVRLGYEHVYTPVLANVELYKTSGHWAHYQEDMFPV 326 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I+++ SYR LP ++ R E+ G+ R R Sbjct: 327 MEMDNEDLVLRPMNCPHHMMIYKNEPHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 386 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + + ++ GL R LS+ D Sbjct: 387 TLNDAHIF-VRPDQIKDEFIRTVRLIEEVYQDFGLNDYTFR---------LSYR-----D 431 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M S D D + + E A Y DV ++ +L + Sbjct: 432 PEDTEKYFDDDAMWNKAQSMLKDAMDELGHDYYEAEGEAAFYGPKLDV---QVKTALGKE 488 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 489 ETLSTVQLD----FLLPERFDL----TYIGEDGKHHRPVVIHRGVVSTMERFVAFLIEEY 540 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG + P +AP + +I + V D +K+ RL G V D E+IG + Sbjct: 541 ---KGAL-PTWLAPVQFQVIPVSP--SVHLDYAKKVQERLQLEGLRVELDSRDEKIGYKI 594 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A + P ++VG + + V ++ E M LE + +A Sbjct: 595 REAQMQKIPYMLVVGDQEAENGAVNVRKYGEQDSETMDLEAFVKHA 640 >gi|52081397|ref|YP_080188.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52786773|ref|YP_092602.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|319647305|ref|ZP_08001527.1| threonyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2] gi|52004608|gb|AAU24550.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52349275|gb|AAU41909.1| ThrS [Bacillus licheniformis ATCC 14580] gi|317390652|gb|EFV71457.1| threonyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2] Length = 643 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 91/387 (23%), Positives = 160/387 (41%), Gaps = 36/387 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S DL+ SG +D Y M Sbjct: 264 QGLPLWLPKGATIRRVIERYIVDKELALGYEHVYTPVLGSKDLYETSGHWDHYQDGMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I+++ I SYR LP ++ R E+ G+ R R Sbjct: 324 MEMDNETLVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + + ++ GL+ R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKDEFIRTVRLIQDVYEDFGLEEYSFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M S + D I + E A Y DV ++ ++ + Sbjct: 429 PEDTEKYYDDDEMWNKAQSMLKEAMDEIGHDYYEAEGEAAFYGPKLDV---QVKTAIGKE 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F K+ L T+ G DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPEKFDL----TYVGEDGKPHRPVVIHRGVVSTMERFVAFLIE-E 536 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 H G W +AP + +I + V D +K+ RL + G V D E+IG + Sbjct: 537 HKGALPTW---LAPVQFQVIPVSP--SVHLDYAKKVQERLQREGLRVEVDTRDEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIK 419 A + P ++VG + V + V ++ Sbjct: 592 REAQMQKIPYMLVVGDQEVENEAVNVR 618 >gi|284037200|ref|YP_003387130.1| prolyl-tRNA synthetase [Spirosoma linguale DSM 74] gi|283816493|gb|ADB38331.1| prolyl-tRNA synthetase [Spirosoma linguale DSM 74] Length = 490 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/343 (20%), Positives = 137/343 (39%), Gaps = 79/343 (23%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E V+ +++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 115 EEELIVRPTSETVIWSTYKNWIQSYRDLPLLINQWANVVRWEMRTRI-FLRTAEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E +K +M D+ +F Sbjct: 174 HTAHATAEEAKFETRQML--------------------------DIYAQF---------- 197 Query: 221 VFCSKDFMDFPI----PSENTDF---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 ++++M P+ + N F DD + + ++++ A A TS Sbjct: 198 ---AEEWMALPVVKGTKTANERFAGADDTLCIEAMMQDGKALQAGTS------------- 241 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 + G ++ F + YV S+G+ + R++ A+I + Sbjct: 242 --------------HFLGQNFAKAFDVQFLNKQNQLDYVWGTSWGV-STRLMGALIMAHS 286 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI---YARLSKVGCDVFWDDM-GEQIG 389 D G++ P +AP ++ ++ I ++ KI L K G V +DD + G Sbjct: 287 DDDGLVLPPKLAPIQVVIVPIYRSEEQLELLSAKIKPLVQELRKAGVSVKYDDSDANKPG 346 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +FA +L G P+++ +G + + + VEI R +E + E Sbjct: 347 WKFAEYELRGVPVRLAMGGRDLENGTVEIARRDLKTKETVPFE 389 >gi|332971649|gb|EGK10599.1| threonine--tRNA ligase [Kingella kingae ATCC 23330] Length = 637 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 85/399 (21%), Positives = 155/399 (38%), Gaps = 52/399 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R E G E+ P + W +SG + +Y Sbjct: 256 LQDEAPGMVFWHPRGWALWQVIEQHMRRELTEAGYQEVKTPQVMDKTFWEKSGHWANYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M L + P + IF ++SYR+LP + R+E G+M Sbjct: 316 NMF-LTSSEKREYAVKPMNCPGHVQIFNHGLRSYRDLPMRLAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSF---DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 R R F+ DA+ F D E +K ++N + ++I+ + G K++ ++ P S Sbjct: 375 RVRGFVQDDAHIFCTEDQIAEETK-AFNLLV---MKIYQQFGFKNVSIKLSLRPEKRAGS 430 Query: 208 HEFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 E A+ G + C ++ + P A Y + H Sbjct: 431 EEIWDKAEQGLRDALTACGVEWEELPGEG-------------------AFYGPKVEYH-- 469 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAM 322 + D+L R + G I + LP + A + D K V + +G++ Sbjct: 470 -IKDAL-------GRSWQCGTI---QLDFVLPERLEAEYVAEDNTKKRPVMLHRAILGSL 518 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ H G +W +AP ++ ++NI D +++ A+L G V D Sbjct: 519 ERFIGILIEEHAGSFPLW---LAPVQMVVMNITEKQA---DYAKEVQAKLQAAGFRVDLD 572 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + + +P Q+ VG K + + +V I+ + Sbjct: 573 IRNEKIGYKIRSNSEMRYPYQLTVGDKEMENGQVSIRKK 611 >gi|229543582|ref|ZP_04432642.1| threonyl-tRNA synthetase [Bacillus coagulans 36D1] gi|229328002|gb|EEN93677.1| threonyl-tRNA synthetase [Bacillus coagulans 36D1] Length = 640 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 85/389 (21%), Positives = 165/389 (42%), Gaps = 40/389 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ + G + P L S DL+ SG +D Y ++M + Sbjct: 261 QGLPLWLPKGATIRRTIERYIVDKEVKLGYDHVYTPVLGSVDLYKTSGHWDHYQEDMFPV 320 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P + ++++ I SYR LP ++ L R E+ G+ R R Sbjct: 321 MKMDNEELVLRPMNCPHHMMVYKNTIHSYRELPIRIAELGLMHRYEMSGALSGLQRVRGM 380 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + DA+ F + P+ K + ++ L ++ + R + P D ++ + Sbjct: 381 TLNDAHIF-VRPDQIKEEFKRVVELILEVYKDFNITDYSFRLSYRDPENTDKYYDDDEMW 439 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + + D F D+ + E A Y DV ++ +L ++ Sbjct: 440 NKAQAMLKETMDDFGF-------DYYE-------AEGEAAFYGPKLDV---QVRTALGKD 482 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 483 ETLSTVQLD----FLLPERFDL----TYVGEDGKPHRPVVIHRGVVSTMERFVAYLIEEY 534 Query: 333 HDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ +I + AH D K+ L G D E++G Sbjct: 535 ---KG-AFPTWLAPIQVQVIPVSPDAH----YDYARKVQEALKAEGVRAELDARDEKLGY 586 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + A + P +IVG + +D+ V ++ Sbjct: 587 RIREAQVQKIPYALIVGDQEATDNAVNVR 615 >gi|240144358|ref|ZP_04742959.1| proline--tRNA ligase [Roseburia intestinalis L1-82] gi|257203608|gb|EEV01893.1| proline--tRNA ligase [Roseburia intestinalis L1-82] gi|291540831|emb|CBL13942.1| prolyl-tRNA synthetase, family I [Roseburia intestinalis XB6B4] Length = 479 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/329 (20%), Positives = 130/329 (39%), Gaps = 66/329 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + D +++ I+SYR+LP + Q +++ E RP +RSREFL ++ + Sbjct: 114 PTSETLFCDFYKNIIQSYRDLPKVYNQWCSVVRWEKETRP---FLRSREFLWQEGH---- 166 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 T + + V L ++ + + M +V E + F Sbjct: 167 TAHATAEEAEQRTVQMLNVYADFCEEVLAMP--------------VVRGQKTEKEKFAGA 212 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 + A Y + +H+ K S G Sbjct: 213 E---------------------------ATYTIEALMHDGKALQS--------------G 231 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 FG ++ + D K YV S+G+ R++ A+I D G++ P +A Sbjct: 232 TSHNFGNGFAKAFGIQYTDKDNKLQYVYQTSWGM-TTRLIGAIIMVHGDDSGLVLPPRIA 290 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P + +I I+ D +++ R+ KV C DD + G +F+ ++ G P+++ Sbjct: 291 PVQAMVIPIQQQKDGVLDTAKEVCERIGKV-CRAKLDDSDKSPGWKFSEQEMRGIPVRIE 349 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G K ++ K R T + +++L+E+ Sbjct: 350 LGPKDIAAGKCVAVRRDTREKIEIALDEL 378 >gi|257865905|ref|ZP_05645558.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257872238|ref|ZP_05651891.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257799839|gb|EEV28891.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257806402|gb|EEV35224.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC10] Length = 646 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 90/416 (21%), Positives = 172/416 (41%), Gaps = 48/416 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + + DL+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMANVDLYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + D ++F + P+ K + + + ++ + R + P D + + Sbjct: 382 TLNDGHTF-VRPDQIKEEFKRTLDLMIGVYEDFNITDYRFRLSYRDPQNKDKYFDDDAMW 440 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + +T + + D ++ D+ + E A Y DV ++ +L Sbjct: 441 ENAQTMLKAAMDELEL-------DYFE-------AEGEAAFYGPKLDV---QVKTALGME 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++++ V + + M A + Sbjct: 484 ETLSTIQLD----FLLPERFDL----TYVGEDGENNHRPVVIHRGIVSTMERFVAYLTEV 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + S+I +++AH D +I RL G V DD E++G Sbjct: 536 YKGAFPTW---LAPIQASIIPVSVEAHS----DYAYEIKERLQAQGLRVEVDDRNEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIRE-----DMSLEEVINYA 438 + + P Q++VG + V+D+ V I+ + T + E D EV NY+ Sbjct: 589 KIRASQTQKIPYQIVVGDQEVNDATVNIRRYGSKETQVEELNLFVDAMAAEVKNYS 644 >gi|221054768|ref|XP_002258523.1| prolyl-t-rna synthase [Plasmodium knowlesi strain H] gi|193808592|emb|CAQ39295.1| prolyl-t-rna synthase, putative [Plasmodium knowlesi strain H] Length = 552 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 26/206 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+Y+ LPLG K+++ + + R + + + LQ+ W S R Y E L + Sbjct: 122 GLYNLLPLGYKSIEKLIHFLNIHLKRVNSHGLFMSILQAKKWWNISDRSKLYSDEFLYVY 181 Query: 98 DRN--------------------DKAMIYGPTHEE----VMTDIFRSHIKSYRNLPFTFY 133 + D +I PT EE ++ ++ +I + ++LP + Sbjct: 182 KQKQQKGDMSKVNETVMTKKKMEDDGLILSPTCEEQAICLINQVYNENIPA-KSLPLLIH 240 Query: 134 QIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-S 192 Q KFR+E R + +S+EFLMKD YSF +Y+ Y +IF L L Sbjct: 241 QFNYKFRNEKRLEKTLFKSKEFLMKDGYSFHSNDICLNETYDSYKECYGKIFSDLKLPFK 300 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGE 218 + + + + SHEF VL G+ Sbjct: 301 VTKKRKMDKMNALESHEFQVLCRDGK 326 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 36/161 (22%) Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 E HIF G YS + + + + + MGSYGIG R++ +++S +D GI P+ Sbjct: 329 EAAHIFKLGDYYSKKLGIKYLNKRNEKNNILMGSYGIGIYRLLYFLVDSFYDDDGIRLPE 388 Query: 343 SVAPFKISLINIKAHDQVCRDACEKI---------------------------------- 368 +APF + LI + KI Sbjct: 389 QIAPFSVYLIQTNQRSKYSATKVAKIVKMAQVTDAVEAMDAPNMATPPLNSNDVEYVLTL 448 Query: 369 --YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 Y D+++DD + + DL+G P ++I+ Sbjct: 449 WLYNTFKNSNVDIYYDDTDLHLSRKLKNCDLIGVPNRIIIN 489 >gi|169829542|ref|YP_001699700.1| threonyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41] gi|168994030|gb|ACA41570.1| Threonyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41] Length = 643 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 97/433 (22%), Positives = 186/433 (42%), Gaps = 38/433 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K+ L +L+E RD +L L T + +G+ WLP G + I +++ Sbjct: 232 KHHLQMLEEAKERDHRKIGKELELFTTS-QKVGQGLPLWLPNGATIRRVIERYIVDKELS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L S +L+ SG +D Y + + +++ +I P + ++++ + Sbjct: 291 LGYKHVYTPVLGSKELYQTSGHWDHYQDSIFPPMEMDNETLIMRPMNCPHHMMVYKNSMH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++ R E+ G+ R R + DA+ F + P+ K + K+ L Sbjct: 351 SYRSLPLRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIF-VRPDQIKAEFQKVVQLIL 409 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ L R LS+ D +T+ + + D M S + D Sbjct: 410 EVYKDFDLNDYSFR---------LSYR-----DPADTEKYFNDDAMWEKAQSMLKEAMDE 455 Query: 243 ISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + L+ E A Y DV ++ ++ + + +S ++ F ++ L + Sbjct: 456 LGLDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----S 504 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DGK H + G+ + R VA +IE + KG +P +AP ++ +I + ++ Sbjct: 505 YVGEDGKPHRPVVIHRGVVSTMERFVAFLIE---EYKG-AFPTWLAPVQVEVIPVS--NE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++I +L+ G V DD E++G + A + P +++G K V V ++ Sbjct: 559 AHFDYAKQIEEQLTAAGLRVEMDDREEKLGYKIREAQMKKIPYMLVIGDKEVEAKGVNVR 618 Query: 420 HRLTGIREDMSLE 432 + E +S E Sbjct: 619 RYGSKDSETISFE 631 >gi|108758355|ref|YP_634772.1| prolyl-tRNA synthetase [Myxococcus xanthus DK 1622] gi|123073939|sp|Q1CXV1|SYP_MYXXD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|108462235|gb|ABF87420.1| prolyl-tRNA synthetase [Myxococcus xanthus DK 1622] Length = 483 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 78/341 (22%), Positives = 139/341 (40%), Gaps = 75/341 (21%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ F I+SYR+LP Q R E+R R +R+ EFL ++ ++ T Sbjct: 114 PTSETIINRSFAKWIQSYRDLPLLLNQWANVMRWEMRTRL-FLRTTEFLWQEGHTCHETE 172 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E ++ +M Y R F ++D+ Sbjct: 173 EDAEKETRQMLEVY-RTF--------------------------------------AEDY 193 Query: 228 MDFPI----PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 M P+ SE+ F + SI +++ ++K+ ++ Sbjct: 194 MAMPVMTGQKSESERFAGALRTYSI--------------------EAMMQDKK----ALQ 229 Query: 284 VGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDS 343 G G ++ F+G DGK H+V S+G+ + R++ +I + D G+I P Sbjct: 230 AGTSHNLGQNFAKAFDTQFQGRDGKMHHVWQTSWGV-STRLIGGLIMTHSDDAGLIVPPK 288 Query: 344 VAPFKISLINI--KAHDQVCRDACEK---IYARLSKVGCDVFWDDMGEQI-GSQFAVADL 397 +A + +I I KA D EK + A L K G V DD + G ++ +L Sbjct: 289 LAATHVVIIPIFGKASDAEKAQVLEKTNALAADLRKAGLGVVLDDDDTKSPGFKYNEHEL 348 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 +G L++ +G K ++ + + R +E +SL+E ++ A Sbjct: 349 IGTCLRIELGPKDLAKNSCVMVRRDVRQKEFVSLDEAVSKA 389 >gi|172038860|ref|YP_001805361.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|171700314|gb|ACB53295.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] Length = 608 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 87/429 (20%), Positives = 164/429 (38%), Gaps = 66/429 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +++EQ + G + + P + DL+ SG + +Y ++M + Sbjct: 222 GLPLWTPKGTIIRSTLEDFLKQEQLKRGYLPVVTPHIGRVDLFKISGHWQNYKEDMFPMM 281 Query: 98 DRNDKA------MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 ++A + P + I++S ++SYR+LP + +R E G+ Sbjct: 282 AETEEAKTSEMGFVLKPMNCPFHIQIYKSELRSYRDLPMRLAEFGTVYRYEQSGELGGLT 341 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F + D++ F +TP+ + + L +F L LK+ R Sbjct: 342 RVRGFTVDDSHLF-VTPDQLDDEFLNVVDLILSVFRSLQLKNFKAR-------------- 386 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 + F P+ D I N E W A D Sbjct: 387 -----------------LSFRDPNS----DKYIGSN---EAWNKAENAIRRAVQTLEMDY 422 Query: 271 LPENKRVSARGIEVGHIF--------YFGT---KYSLP--MSATFKGADGKDHY-VQMGS 316 + G ++ IF GT Y+LP + G +G H V + Sbjct: 423 FEAEGEAAFYGPKLDFIFQDALEREWQLGTVQVDYNLPERFELEYVGEEGNRHRPVMIHR 482 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G++ + ++ + G +W +AP ++ L+ + V D + + ++ +G Sbjct: 483 APFGSLERLIGILIEEYAGDFPLW---LAPTQVRLLPV---SDVQLDYVKDVANKMLSLG 536 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D GE++G + P+ IVG+K V + + I+ R +G M+++EVI Sbjct: 537 IRAEADTSGERLGKMIRNGEKQKIPVMAIVGAKEVEANALSIRTRASGELGTMAVDEVIE 596 Query: 437 YASHRFSNN 445 + +N+ Sbjct: 597 KLNDAITNH 605 >gi|298675789|ref|YP_003727539.1| prolyl-tRNA synthetase [Methanohalobium evestigatum Z-7303] gi|298288777|gb|ADI74743.1| prolyl-tRNA synthetase [Methanohalobium evestigatum Z-7303] Length = 479 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 4/169 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++VG + G ++ ++ +G+ Y YGI + R +AA+I D KG+ Sbjct: 223 GRTLQVGTAHHLGNNFAKTFDIEYEDPNGEQVYAYQSCYGI-SERCIAAMISVHGDDKGL 281 Query: 339 IWPDSVAPFKISLIN--IKAHD-QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 I P +AP ++ +I K D + DAC+ + L G D + G+++ Sbjct: 282 ILPPEIAPVQVIIIPIIFKNKDKESILDACKNVKGSLESAGVKTKIDTSDRRPGAKYYRW 341 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ G PL++ +G K + + V + R TG +E ++++E+ + + +F + Sbjct: 342 EMKGVPLRIEIGPKDLKNESVMMVRRDTGDKEQIAMDEINDTVASKFES 390 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 5/159 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+Y W P G +IIRE +R + + + E+ + +E+ + Sbjct: 36 KGLYVWNPFGFSIRKKTYSIIRELLDRDHEETLFPLLIPENEFMKETKHIKGFEEEVYWV 95 Query: 97 ADRNDKAMIYG----PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 + PT E + I++ ++S+ +LP +YQI FR E + ++R Sbjct: 96 THGGTSPLEVNLALRPTSETAIYPIYKLWVRSHADLPIKYYQIVNTFRYETKHTRPLIRL 155 Query: 153 REFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 RE K+A++ T E + ++ Y + RL L Sbjct: 156 REITSFKEAHTVHETWEDAAAQVDEAIDRYHEFYERLCL 194 >gi|229175285|ref|ZP_04302800.1| Threonyl-tRNA synthetase [Bacillus cereus MM3] gi|228608117|gb|EEK65424.1| Threonyl-tRNA synthetase [Bacillus cereus MM3] Length = 645 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 174/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 ++ G DGK H + G+ + R VA +IE KG +P +AP + +I + Sbjct: 506 ---SYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQAQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|124023562|ref|YP_001017869.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] gi|166225478|sp|A2CAU4|SYT_PROM3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123963848|gb|ABM78604.1| Threonyl-tRNA synthatase [Prochlorococcus marinus str. MIT 9303] Length = 640 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 93/416 (22%), Positives = 157/416 (37%), Gaps = 90/416 (21%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GMI H+KG + L Q IRE + E+ P + LW +SG ++ + Sbjct: 261 GMIFWHAKGWAIYQVLEQ--------YIRETLSLHAYQEIRTPQVVDRSLWEKSGHWEKF 312 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 +M N + I P + IF +KSYR+LP + R+E G Sbjct: 313 KDDMFTTTSENREYAI-KPMNCPCHVQIFNQGLKSYRDLPIRLAEFGSCLRNEPSGSLHG 371 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 +MR R F+ DA+ F T + +K I+ G S+ ++ + P +G D Sbjct: 372 LMRVRNFVQDDAHIF-CTELQVQEEVSKFIDLVFEIYRSFGFDSVLIKLSTRPEKRVGSD 430 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 E W A SD + Sbjct: 431 --------------------------------------------EIWDKSEKALSDALDA 446 Query: 266 K--LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGADGKD--- 309 K +D LP IE +G ++ GT +S+P + A++ D + Sbjct: 447 KGLAWDLLPGEGAFYGPKIEFSLKDCLGRVWQCGTIQVDFSMPERLGASYVAEDSQRRTP 506 Query: 310 ---HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDAC 365 H +GS+ R + +IE + G+ +W +AP +++++ I + Q C+D C Sbjct: 507 VMLHRAILGSFE----RFIGILIE-HYAGRMPVW---LAPVQVAVMGITDRNAQTCQDVC 558 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +K+ A + D+ E+IG + L P +I+G K +V ++ R Sbjct: 559 KKLSALEYRTEVDL----RNEKIGFKVREHTLQRVPFLIIIGDKEQQSGEVAVRTR 610 >gi|195441810|ref|XP_002068665.1| GK18335 [Drosophila willistoni] gi|298206800|ref|YP_003714979.1| prolyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] gi|83849432|gb|EAP87300.1| prolyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] gi|194164750|gb|EDW79651.1| GK18335 [Drosophila willistoni] Length = 492 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 5/164 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F +GK YV S+G+ + R++ A+I + D KG+ Sbjct: 234 GKALQAGTSHFLGQNFAEAFDVKFTSKEGKQEYVWASSWGV-STRLMGALIMTHSDDKGL 292 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P ++AP ++ ++ I +D+ E+ + L VG V +D + G +FA Sbjct: 293 VLPPNLAPIQVVIVPIYRNDEQFNAISEEAKLLTEELRAVGISVKFDGRDTHKPGWKFAQ 352 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 +L G PL++ +G K + + VE+ R T +E + E+V+ A Sbjct: 353 YELQGVPLRIAIGPKDLENGTVELARRDTLTKEFVKREDVVAKA 396 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 4/99 (4%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GK ++ + ++ ++ PT E ++ + ++ I+SYR+LP Q R E+R R Sbjct: 105 GKLIVDPEAKLEEELVVRPTSEAIIWNTYKGWIQSYRDLPLLINQWANVVRWEMRTRL-F 163 Query: 150 MRSREFLMKDAYSFDLTPE---GSKHSYNKMFVSYLRIF 185 +R+ EFL ++ ++ T E N ++ ++ F Sbjct: 164 LRTAEFLWQEGHTAHATREEALAETEQMNNIYAEFVENF 202 >gi|302389803|ref|YP_003825624.1| YbaK/prolyl-tRNA synthetase associated region [Thermosediminibacter oceani DSM 16646] gi|302200431|gb|ADL08001.1| YbaK/prolyl-tRNA synthetase associated region [Thermosediminibacter oceani DSM 16646] Length = 489 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%) Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ A+ E D G+IWPD +AP+K+ +I + D+ D K+Y L+K+ + DD Sbjct: 364 LILAIAEKHCDDSGLIWPDFIAPYKVVVIPVNTKDERLLDRSIKVYEELNKIMPTII-DD 422 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + G +F A+LLGFP+++ +G + + EI R TG Sbjct: 423 RPQSPGVKFKDAELLGFPIRITIGPRSLEKGVAEINLRRTG 463 >gi|224541864|ref|ZP_03682403.1| hypothetical protein CATMIT_01036 [Catenibacterium mitsuokai DSM 15897] gi|224525214|gb|EEF94319.1| hypothetical protein CATMIT_01036 [Catenibacterium mitsuokai DSM 15897] Length = 479 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 81/162 (50%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YFG ++ + TF D K +V S+G+ + R++ A+I D G+ Sbjct: 225 GKALQSGTSHYFGQGFAKAFNMTFLDKDNKLKHVYQTSWGV-STRLLGAIIMVHGDDNGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ +I I+ + ++I A+L G V D + G +F+ A++ Sbjct: 284 VLPPRLAPTQVVIIPIQQKKAGVLEKADEIAAQLKAAGMRVSVDASDKSPGWKFSEAEMR 343 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P+++ VG + + + + R G++ M L+E + A H Sbjct: 344 GIPVRIEVGPRDIENGHCVVVKRNDGVKTQMDLDENLPQAIH 385 >gi|229083697|ref|ZP_04216020.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-44] gi|228699626|gb|EEL52288.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-44] Length = 476 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 81/406 (19%), Positives = 159/406 (39%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ +G + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENIQKVMDEKLKASGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQEETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + TD + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTDKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + + + R+ KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVIIVPIAQHKEGVLEKAAGLQERIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFVSMDQL 376 >gi|313203193|ref|YP_004041850.1| prolyL-tRNA synthetase [Paludibacter propionicigenes WB4] gi|312442509|gb|ADQ78865.1| prolyl-tRNA synthetase [Paludibacter propionicigenes WB4] Length = 490 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ TF K YV S+G+ + R++ A+I + D G++ Sbjct: 234 KALQAGTSHFLGQNFAKAFDVTFMDKSNKLDYVWATSWGV-STRLMGALIMTHSDDNGLV 292 Query: 340 WPDSVAPFKISLINI-KAHDQVCR-DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAVA 395 P ++APF++ ++ I K +Q+ DA +++ +L +G V +D+ ++ G +FA Sbjct: 293 LPPNLAPFQVVIVPIYKNEEQLAAIDAKVDEMIPKLKALGISVKYDNNDNKKPGWKFAEY 352 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 +L G P+++ +G++ + + VE+ R T +E +++E V NY S Sbjct: 353 ELKGVPVRLALGARDLENGTVEVARRDTLTKETVAIEGVENYIS 396 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 2/103 (1%) Query: 87 DSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 D GK ++ D + ++ +I PT E ++ + ++ I+SYR+LP Q R E+R Sbjct: 100 DPNGKGLIVDPDAKLEEELIVRPTSETIIWNTYKGWIQSYRDLPILINQWANVVRWEMRT 159 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 R +R+ EFL ++ ++ T + KM Y R Sbjct: 160 RL-FLRTAEFLWQEGHTAHATEAEAVTEARKMLEVYADFAERF 201 >gi|229159541|ref|ZP_04287556.1| Prolyl-tRNA synthetase 2 [Bacillus cereus R309803] gi|228623946|gb|EEK80757.1| Prolyl-tRNA synthetase 2 [Bacillus cereus R309803] Length = 502 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 81/406 (19%), Positives = 159/406 (39%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 62 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 121 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 122 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 178 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 179 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 212 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + TD + A Y S +H+ Sbjct: 213 ------------FC-EDYLAIPVIKGQKTDKEKFAGAK-------ATYTIESLMHD---- 248 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 249 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 297 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + + ++ R+ V V D + Sbjct: 298 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATELQGRIQNVA-RVKVDVSNKTP 356 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 357 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 402 >gi|206889512|ref|YP_002249047.1| threonyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741450|gb|ACI20507.1| threonyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 617 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 82/388 (21%), Positives = 157/388 (40%), Gaps = 41/388 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + ++E + G + P + DLW +SG D Y + M Sbjct: 242 GLIIWLPNGAIVRKIIEDFWKDEHLKAGYQLLYTPHIARLDLWRKSGHLDFYRENMYSPM 301 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++ A P + +++S ++SYR LP F ++ +R E G++R R F Sbjct: 302 EIDEIAYQLKPMNCPFHIQVYKSELRSYRELPLRFAELGTVYRYERSGVLHGLLRVRGFT 361 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F T E + K+ + I G + + + P +++ + Sbjct: 362 QDDAHIF-CTEEQLEEEIQKVLDFTVFILSTFGFTAYDIYISTRP------EKYVGSIEN 414 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 E F ++ + + N + I Y D+ K+ D L N+ Sbjct: 415 WEKATFA----LEEALKTRNLPY-------QIDPGEGVFYGPKIDI---KIKDVL--NRS 458 Query: 277 VSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSH 333 I+V +++P T++G DGK+H + + +G++ V+ + Sbjct: 459 WQCSTIQVD--------FNIPERFDITYRGKDGKEHRPIMIHRALMGSLERFMGVLIEHY 510 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G +W +AP +I +++I D ++Y +L V + E+IG + Sbjct: 511 AGAFPLW---LAPVQIEVMSISEKHA---DYAARVYRQLINNDFRVKLNIDNEKIGYKIR 564 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHR 421 A L P VI+G K + ++ + ++ R Sbjct: 565 NATLNKVPYMVIIGDKEIENNAITVRKR 592 >gi|325103166|ref|YP_004272820.1| prolyl-tRNA synthetase [Pedobacter saltans DSM 12145] gi|324972014|gb|ADY50998.1| prolyl-tRNA synthetase [Pedobacter saltans DSM 12145] Length = 490 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 24/217 (11%) Query: 249 VEQWTA-PYAATSDVHNEKLFDSLP----ENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E W A P NE+ +L E + ++ G + G ++ F Sbjct: 197 AENWLALPVVRGKKTANERFAGALDTYCIEALMQDGKALQAGTSHFLGQNFAKAFDVKFT 256 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCR 362 +GK +V S+G+ + R++ A+I + D G++ P +AP ++ ++ I K +++ R Sbjct: 257 SKEGKQEFVWATSWGV-STRLMGALIMAHSDDAGLVLPPKLAPIQVVIVPINKGEEELAR 315 Query: 363 DA--CEKIYARLSKVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + I A+L G V +DD Q G +FA ++ G P+++ +G + + ++ +E+ Sbjct: 316 ITVVADDIIAQLKAKGISVKYDDRDTQRPGFKFAEYEMKGVPVRLAIGGRDLDNNTIEVA 375 Query: 420 HRLTGIREDMS-----------LEEVIN---YASHRF 442 R T +E MS LEE+ N +HRF Sbjct: 376 RRDTRTKETMSRDNIADVVESLLEEIQNNIYQKAHRF 412 Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + ++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 114 EEELIVRPTSETIIWNTYKGWIQSYRDLPILVNQWANVVRWEMRTRL-FLRTAEFLWQEG 172 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T E + KM Y Sbjct: 173 HTAHATREEAVEETEKMLEVY 193 >gi|149374489|ref|ZP_01892263.1| threonyl-tRNA synthetase [Marinobacter algicola DG893] gi|149361192|gb|EDM49642.1| threonyl-tRNA synthetase [Marinobacter algicola DG893] Length = 641 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 98/450 (21%), Positives = 179/450 (39%), Gaps = 79/450 (17%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD KL L + + + G+ W P G + +R +Q++ Sbjct: 229 KAYLHRLEEAEKRDHRKIGKKLSLF--HMQEEAPGMVFWHPDGWSLYQEIEQYMRGKQHK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + S LW +SG +D + +M ++++D A+ P + +F + Sbjct: 287 HGYQEIKTPQVVSRALWEKSGHWDKFKDDMFTTESEKHDYAI--KPMNCPCHVQVFNQGL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSY++LP + R+E G+MR R F DA+ F + + + + Sbjct: 345 KSYKDLPLRLAEFGSCHRNEASGALHGLMRVRGFTQDDAHIF-----CEEDAIQQEVSDF 399 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + + H + AD G T++ + P + D+ Sbjct: 400 IGMLHE------------------------IYADFGFTEIL----YKLSTRPEKRVGSDE 431 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDS--LPENKRVSARGIE------VGHIFYFGT- 292 + W AA + N + D LP IE +G ++ GT Sbjct: 432 V---------WDKSEAALEEALNREGVDWELLPGEGAFYGPKIEFSLKDCIGRVWQCGTI 482 Query: 293 --KYSLP--MSATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 +S+P + A + + + H +GS+ R + +IE ++G W Sbjct: 483 QVDFSMPGRLGAQYVADNSERKTPVMLHRAVLGSF----ERFIGILIE-EYEGAFPTW-- 535 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPL 402 +AP +I+++NI + RD C+ + + +G V D E+IG + + P Sbjct: 536 -LAPTQIAVLNITDNQ---RDYCQNLAKKWDSLGYRVNADLRNEKIGFKIREHTINKVPF 591 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 V++G K V ++ V ++ R +SLE Sbjct: 592 LVVIGDKEVENNAVAVRTRKGEDLGTLSLE 621 >gi|326789266|ref|YP_004307087.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427] gi|326540030|gb|ADZ81889.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427] Length = 586 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 108/441 (24%), Positives = 173/441 (39%), Gaps = 57/441 (12%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L T I G +LP G + + R+ R G Sbjct: 184 YLQSIEEAKKRDHRKLGKELGLFT--ILDEGPGFPFFLPKGMVLKNLLIDYWRKLHTREG 241 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 +E+S P + + +LW SG +D Y + M + D D A+ P + +++ S Sbjct: 242 YVEISTPMMLNKELWETSGHWDHYRENMYTTVIDDTDFAI--KPMNCPGGMLVYKLQPHS 299 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ L R E G+MR R F DA+ F +T E + Sbjct: 300 YRELPIRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIF-MTQEQITDEIKGVVRLIDE 358 Query: 184 IFHRLGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 ++ + G K + R E+ IG D D+ + +E Sbjct: 359 VYSKFGFKYHVELSTRPENS-IGSD----------------------EDWNVATEGLKKA 395 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D++ I E A Y D H E DS+ R + G I + LP+ Sbjct: 396 LDEMQLEYVINEGDGAFYGPKIDFHLE---DSI-------GRTWQCGTI---QLDFQLPV 442 Query: 299 --SATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 A + GADGK H + + G++ ++ + GK +W +AP ++ ++ I Sbjct: 443 RFEAEYIGADGKKHRPIMIHRVVFGSIERFIGILIEHYAGKFPLW---LAPVQVKVLPIS 499 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 D+ + A L K G D+ E+IG + A L P V+VG K V + Sbjct: 500 --DKFSEYGA-FVMAELQKQGIRCEIDNRDEKIGYKIREAQLGKVPYMVVVGQKEVESNL 556 Query: 416 VEIKHRLTGIREDMSLEEVIN 436 V I+ R +E S++E + Sbjct: 557 VTIRRRDESTQEGYSIQEFVQ 577 >gi|313623625|gb|EFR93788.1| threonyl-tRNA synthetase [Listeria innocua FSL J1-023] Length = 640 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 86/403 (21%), Positives = 169/403 (41%), Gaps = 36/403 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ R G + P + + +L+ SG +D Y ++M Sbjct: 260 QGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPT 319 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P + I+++ I SYR LP ++ + R E+ G+ R R Sbjct: 320 MKMDNEELVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ L ++ +K R LS+ D Sbjct: 380 TLNDAHVF-VRPDQIKDEFKRVVELILEVYKDFDIKDYSFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M + D + ++ E A Y DV ++ ++ + Sbjct: 425 PKNTEKYFDDDAMWEKAQAMLKSAMDEMHMDYFEAEGEAAFYGPKLDV---QVKTAIGKE 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DG+ H + G+ + R VA +IE Sbjct: 482 ETLSTVQLD----FLLPERFDL----TYIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY 533 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ LI + A + D + + +L + G DD E++G + Sbjct: 534 ---KG-AFPTWLAPVQMELIPVNADAHL--DYAKGVQDKLQRAGLRAEVDDRNEKLGYKI 587 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A P +++G + V V ++ + E M L+ I Sbjct: 588 REAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFI 630 >gi|269119235|ref|YP_003307412.1| threonyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] gi|268613113|gb|ACZ07481.1| threonyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] Length = 634 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 87/414 (21%), Positives = 172/414 (41%), Gaps = 53/414 (12%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + L + +H G ++P G + ++ + I R E + G E+ P Sbjct: 236 EAEKRDHRKLGKQLNLFFLDEHGPGFPFFMPKGMEVINKLQEIWRREHKKAGYKEIKTPV 295 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + +LW SG + +Y +E + ++ ++K P + +++++ SY+N P + Sbjct: 296 MLDKELWEISGHWFNY-RENMYTSEIDEKEYAIKPMNCPGAILAYKNNLHSYKNFPLKYG 354 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ L R E G+MR R F DA+ F T + + ++ Y R + G + Sbjct: 355 EMGLVHRHEFSGALHGLMRVRAFTQDDAHVF-CTEDQIEDQIMEIINLYDRFYKLFGFE- 412 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 + + P S E +A+ T K +D+ + + F Sbjct: 413 YNIELSTKPDKAIGSDEIWDIAERDLTNALV-KMGIDYKLNPGDGAF------------- 458 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLPMS--ATFKGADG 307 Y D K+ DS +G I+ GT ++LP+ ++ G DG Sbjct: 459 ---YGPKIDF---KMKDS-------------IGRIWQCGTIQLDFNLPLRFHMSYIGPDG 499 Query: 308 KDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + H V + G++ ++ + G IW +AP ++S++ I + Sbjct: 500 EKHQPVMIHRAMYGSIERFMGILIEHYAGAFPIW---LAPVQVSILTISGEQA---EYAS 553 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADL-LGFPLQVIVGSKFVSDSKVEIK 419 ++ +L +G D E+IG + A+ P+Q+I+G V++++V I+ Sbjct: 554 DLFKKLQNIGIRTELDIRDEKIGYKIREANAEQKIPIQLIIGKNEVANNEVNIR 607 >gi|322392280|ref|ZP_08065741.1| threonine--tRNA ligase [Streptococcus peroris ATCC 700780] gi|321144815|gb|EFX40215.1| threonine--tRNA ligase [Streptococcus peroris ATCC 700780] Length = 647 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 87/399 (21%), Positives = 163/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ G + P + S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRILERYIVDKEVAAGYQHVYTPPIASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++ H+ SYR LP +I + R E Sbjct: 314 REDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D ++F + PE + + K+ + ++ L R LS Sbjct: 374 GLQRVREMSLNDGHTF-VAPEQIEDEFKKILQLIIDVYEDFNLTDYRFR---------LS 423 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTD------FDDIISLNSIVEQWTAPYAATSD 261 + D + + D M EN DD+ E A Y D Sbjct: 424 YR-----DPADKHKYFDNDEM-----WENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG++H M G I Sbjct: 474 I---QMKTALGKEETLSTIQLD----FLLPERFDL----HYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I + V D ++ +L G V Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTVIPVSNEKHV--DYAWEVAKKLRDRGVRVD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E++ + + P Q+IVG K + ++ V ++ Sbjct: 578 VDERNEKMQFKIRASQTQKIPYQLIVGDKEMDENAVNVR 616 >gi|293610405|ref|ZP_06692706.1| threonyl-tRNA synthetase [Acinetobacter sp. SH024] gi|292827637|gb|EFF86001.1| threonyl-tRNA synthetase [Acinetobacter sp. SH024] gi|325124561|gb|ADY84084.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 640 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 87/415 (20%), Positives = 158/415 (38%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +Y Sbjct: 255 MQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTLWEKSGHAANYAD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSENRNYAV-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGQEVADFIKLTLEVYKDFGFEEVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L++ +W + K+ Sbjct: 431 ----ALWDMAE------KSLAD--------------ALDAAGLEWEL-QPGEGAFYGPKI 465 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP + A++ D +D V + +G+ Sbjct: 466 EFSLKDC---------LGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P ++P + ++NI +ACEK+ A+L + G Sbjct: 517 FERFIGILIEHYAG---FMPPWLSPLQACVMNITDSQA---EACEKVVAKLKENGLRAIS 570 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P +++G + V + V ++ R MS++ I+ Sbjct: 571 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFID 625 >gi|164685973|ref|ZP_01946163.2| threonyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|212218739|ref|YP_002305526.1| threonyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] gi|164601497|gb|EAX33218.2| threonyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|212013001|gb|ACJ20381.1| threonyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] Length = 660 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 104/440 (23%), Positives = 168/440 (38%), Gaps = 77/440 (17%) Query: 17 DAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+L+ + + H S G W P G + + IR ++ G E+ P Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 L A LW +SG + +G ++ L + +I P IF +KSYR+LP + Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSLPLEPQQYVI-KPMSCPAHVQIFNQGVKSYRDLPLRYA 364 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F+ DA+ F E S F+ L Sbjct: 365 EFGACHRNEPSGTLHGLMRLRGFVQDDAHIF--CTEDQIQSEVSAFIDQL---------- 412 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 HE V AD G T+V P + D++ W Sbjct: 413 ---------------HE--VYADFGFTEVIHKLSTR----PEKRVGSDEV---------W 442 Query: 253 TAPYAATSDVHNEK--LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MS 299 T A ++ N K +D LP IE +G I+ GT +S+P + Sbjct: 443 TKAEQALAEAFNRKGVEWDILPGEGAFYGPKIEFSLRDCLGRIWQCGTVQVDFSVPERLG 502 Query: 300 ATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 A + DG H +GS+ R + ++E S GK +W +AP ++ ++N Sbjct: 503 AHYIAEDGSKKPPVMIHRAILGSF----ERFLGILLEESA-GKLPLW---LAPVQVVVMN 554 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I D + L +G D E+IG + + P V++G + V+D Sbjct: 555 ITDRQA---DYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVAD 611 Query: 414 SKVEIKHRLTGIREDMSLEE 433 + ++ ++LEE Sbjct: 612 KTLSVRALEDEASTTITLEE 631 >gi|319892730|ref|YP_004149605.1| Threonyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317162426|gb|ADV05969.1| Threonyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|323464237|gb|ADX76390.1| threonyl-tRNA synthetase [Staphylococcus pseudintermedius ED99] Length = 645 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 84/388 (21%), Positives = 167/388 (43%), Gaps = 37/388 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + + DL+ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEISLGYDHVYTPVMANVDLYKTSGHWDHYQEDMFPPM 321 Query: 98 DRN-DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + D+AM+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 QLDADEAMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + DA+ F + P+ K + ++ L ++ G + R + + ++ + Sbjct: 382 TLNDAHIF-VRPDQIKEEFKRVVQMILDVYEDFGFEDYKFRLSYRDKADKEKYYDDDDMW 440 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 +T E + + D M+ P +++ I A Y DV ++ ++ + Sbjct: 441 NTAEAMLKEAVDEMNLP-------YEEAIG-------EAAFYGPKLDV---QVKTAMGKE 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F K+ L T+ G DG+ H + G+ + R VA + E + Sbjct: 484 ETLSTAQLD----FLLPKKFEL----TYIGKDGEHHRPVVIHRGVVSTMERFVAFLTEET 535 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ +I + ++ + D +I+ L G V DD E++G + Sbjct: 536 ---KG-AFPTWLAPQQVEIIPV--NNDLHYDYARQIHDELKSQGVRVHIDDRNEKMGYKI 589 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKH 420 A + P Q++VG K + +++V ++ Sbjct: 590 REAQMKKIPYQLVVGDKELENNEVNVRQ 617 >gi|262341274|ref|YP_003284129.1| proline-tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272611|gb|ACY40519.1| proline-tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 488 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 79/330 (23%), Positives = 132/330 (40%), Gaps = 67/330 (20%) Query: 99 RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMK 158 R + ++ PT E ++ ++ I+SYR+LP Q R E MR+R FL Sbjct: 110 RLQEELVIRPTSESIIWKTYKRWIQSYRDLPVLLNQWGNALRWE-------MRTRLFLRT 162 Query: 159 DAYSFDLTPEG-SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG 217 + L EG + HS K + E+ I ++ +F Sbjct: 163 TEF---LWQEGHTAHSTKKEAIE-----------------EANKIL-NIYTDF------- 194 Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 S++FM P+ L I Y + E L Sbjct: 195 ------SENFMAIPV------------LQGIKPHMDKFYGSEKTYCIEALMQD------- 229 Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + +++G + G +S F +GK YV S+G+ + R++ +I S D KG Sbjct: 230 -GKALQIGTSHFLGQNFSKAFDVQFTNYNGKKEYVWSTSWGV-STRLIGGLIMSHSDDKG 287 Query: 338 IIWPDSVAPFKISLINIKAHDQ---VCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFA 393 +I P +AP +I +I I + + + D EKI L + V +D+ + G +F Sbjct: 288 LILPPKIAPIQIVIIPIYKNKEKFGIINDVVEKILNVLEQERIRVKYDNRVTFTPGWKFH 347 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ G PL++ +GS + + KVEI R T Sbjct: 348 EYEMKGVPLRISIGSNEIKNEKVEIFRRDT 377 >gi|229019800|ref|ZP_04176603.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273] gi|229026025|ref|ZP_04182408.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272] gi|228735241|gb|EEL85853.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272] gi|228741525|gb|EEL91722.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273] Length = 645 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 174/424 (41%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 ++ G DGK H + G+ + R VA +IE KG +P +AP + +I + Sbjct: 506 ---SYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQAQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVAENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|47096724|ref|ZP_00234309.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|254898274|ref|ZP_05258198.1| threonyl-tRNA synthetase [Listeria monocytogenes J0161] gi|254912233|ref|ZP_05262245.1| threonyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254936561|ref|ZP_05268258.1| threonyl-tRNA synthetase [Listeria monocytogenes F6900] gi|47014908|gb|EAL05856.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258609155|gb|EEW21763.1| threonyl-tRNA synthetase [Listeria monocytogenes F6900] gi|293590208|gb|EFF98542.1| threonyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 640 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 94/436 (21%), Positives = 183/436 (41%), Gaps = 38/436 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K F+ + +E RD +L L T I + +G+ WLP G + I +++ R Sbjct: 228 KEFIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEER 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I Sbjct: 287 LGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ + R E+ G+ R R + DA+ F + P+ K + ++ L Sbjct: 347 SYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVF-VRPDQIKDEFKRVVELIL 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ +K R LS+ D T+ + D M + D Sbjct: 406 EVYKDFDIKDYSFR---------LSYR-----DPKNTEKYFDDDAMWEKAQAMLKSAMDE 451 Query: 243 ISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + ++ E A Y DV ++ ++ + + +S ++ F ++ L + Sbjct: 452 MEMDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----S 500 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG+ H + G+ + R VA +IE KG +P +AP ++ LI + A Sbjct: 501 YIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY---KG-AFPTWLAPVQMELIPVNADAH 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + D + + +L + G DD E++G + A P +++G + V V ++ Sbjct: 557 L--DYAKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVR 614 Query: 420 HRLTGIREDMSLEEVI 435 + E M L+ I Sbjct: 615 RYGSKDSETMDLDAFI 630 >gi|295698321|ref|YP_003602976.1| threonyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] gi|291157332|gb|ADD79777.1| threonyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] Length = 414 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 93/424 (21%), Positives = 159/424 (37%), Gaps = 63/424 (14%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 Q+S G W P G + IR + E+ P + LW ++G +Y K M Sbjct: 32 QNSPGSVFWNPNGLIIFQELKRYIRLKLKEYQYQEVKTPEILHKSLWKKTGHLQNYEKYM 91 Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 +++ + K + P + IF+ I+SYR+LP + R+EL G+MR Sbjct: 92 FKVSSESRKYCL-KPMNCPGHIKIFQQKIRSYRDLPLRIAEFGNCHRNELSGSLHGLMRV 150 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 REF DA+ F T E K ++ G K I +R + P Sbjct: 151 REFTQDDAHIF-CTKEQVFEEIKKCIGMVQEVYKTFGFKKISIRLATRP----------- 198 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 Q + + D+ SI+E+ EK FD LP Sbjct: 199 ------KQRIGEEKYWDYA--------------ESILEKAL-----------EKEFDLLP 227 Query: 273 ENKRVSARGIE------VGHIFYFGT---KYSLPMSATFKGADGKD---HYVQMGSYGIG 320 EN IE + + GT + LP+ D K+ H + + +G Sbjct: 228 ENGAFYGPKIEFTLHDRLEREWQCGTIQLDFLLPIQLGVFYIDQKNKKQHPMIIHRAILG 287 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ + G P ++P ++ +I++ + + +KI R+ G V+ Sbjct: 288 SIERFIGILIEHYSG---YLPTWLSPIQVVVISV---SKKYINFSKKIVQRIKYAGIRVY 341 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 D E+I + + P V+ G K V I+ +L + + +S+E I S Sbjct: 342 HDLKNEKINLKIRKHSINKIPYIVLCGEKEEKTGSVSIRRKLEKVIKTISIENFIKMVSS 401 Query: 441 RFSN 444 +N Sbjct: 402 EINN 405 >gi|145591039|ref|YP_001153041.1| prolyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] gi|166980145|sp|A4WJ22|SYP_PYRAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145282807|gb|ABP50389.1| prolyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 488 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 162/411 (39%), Gaps = 75/411 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG Y W P G + +V +IR + TG E+ P + + ES + KE+ Sbjct: 40 KGAYVWRPYGMRLRRHVEELIRRSHDETGHQEVLFPVFIPYEFFGKESQHIRGFEKEVFW 99 Query: 96 LADRNDKA--MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 ++ ++ ++ PT E + + + + Y++LP YQI FR E + ++R R Sbjct: 100 VSKGGEEGERLVLRPTSETAIMPMVKLWVHDYKDLPLRLYQIVSVFRAETKMTHPMIRLR 159 Query: 154 EFLM-KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 E M K+A++ + E ++ + Y +IF + L + Sbjct: 160 EISMFKEAHTVHVDREDAERQVREAVEIYKKIFDEMCLAYM------------------- 200 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 + D+ F FD ++ ++ T Y T+ Sbjct: 201 --------INKRPDWDKFAGAEYTIAFDTVLPDGRTLQIGTVHYLGTN------------ 240 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 R EV ++ GT+ SYGI + R +AA++ + Sbjct: 241 -----FTRVFEVTYLAADGTR----------------RLAHTTSYGI-SERSIAAMLITH 278 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI-YAR-----LSKVGCDVFWDDMGE 386 D G + P +AP ++ ++ I ++ +A I YAR L + G V DD + Sbjct: 279 GDDAGTVLPPRLAPIQVVIVPIFYGEE---EAASVISYAREVEKALREAGMRVHIDDRPD 335 Query: 387 QI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + G +F +L G PL+V VG + + +V I R T + + L E+++ Sbjct: 336 KTPGWKFYFWELKGVPLRVEVGKRDLEKRQVVITRRDTLEKYAVGLGELVD 386 >gi|313113439|ref|ZP_07799028.1| prolyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] gi|310624166|gb|EFQ07532.1| prolyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] Length = 479 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YFG K+S TF G D + H+ S+G+ + R+V A+I + D G+ Sbjct: 226 GKALQSGTSHYFGDKFSKAYDVTFTGRDNQLHHPFQTSWGV-STRLVGAIIMTHGDDDGL 284 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 I P +VAP ++ ++ I AH + ++ ++SK V DD G +F+ ++ Sbjct: 285 ILPPAVAPIQVVVVPIAAHKPGVSEKAAELAEKISKYA-RVKLDDSDNAPGWKFSQWEMK 343 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ +G K + ++ + R T + +SL+E+ Sbjct: 344 GVPLRLEIGPKDLEKNQCVLVRRDTREKVFVSLDEL 379 >gi|315282482|ref|ZP_07870886.1| threonyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313613866|gb|EFR87606.1| threonyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 640 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 95/436 (21%), Positives = 183/436 (41%), Gaps = 38/436 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K F+ + +E RD +L L T I + +G+ WLP G + I +++ R Sbjct: 228 KEFIQMQKEAKERDHRKLGKELDLFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEER 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I Sbjct: 287 LGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ + R E+ G+ R R + DA+ F + P+ K + ++ L Sbjct: 347 SYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVF-VRPDQIKDEFKRVVELIL 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ +K R LS+ D T+ + D M S D Sbjct: 406 EVYKDFDIKDYSFR---------LSYR-----DPKNTEKYFDDDAMWEKAQSMLKSAMDE 451 Query: 243 ISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + ++ E A Y DV ++ ++ + + +S ++ F ++ L T Sbjct: 452 MGMDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----T 500 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG+ H + G+ + R VA +IE KG +P +AP ++ LI + A Sbjct: 501 YIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY---KG-AFPTWLAPVQMELIPVNADAH 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + + + +L + G DD E++G + A P +++G + V V ++ Sbjct: 557 L--NYAKGVQDKLQRAGLRSEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVR 614 Query: 420 HRLTGIREDMSLEEVI 435 + E M L+ I Sbjct: 615 RYGSKDSETMDLDAFI 630 >gi|295101509|emb|CBK99054.1| prolyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6] Length = 479 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YFG K+S TF G D + H+ S+G+ + R+V A+I + D G+ Sbjct: 226 GKALQSGTSHYFGDKFSKAYDVTFTGRDNQLHHPFQTSWGV-STRLVGAIIMTHGDDDGL 284 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 I P +VAP ++ ++ I AH + ++ ++SK V DD G +F+ ++ Sbjct: 285 ILPPAVAPIQVVVVPIAAHKPGVSEKAAELAEKISKYA-RVKLDDSDNAPGWKFSQWEMK 343 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ +G K + ++ + R T + +SL+E+ Sbjct: 344 GVPLRLEIGPKDLEKNQCVLVRRDTREKVFVSLDEL 379 >gi|260437797|ref|ZP_05791613.1| proline--tRNA ligase [Butyrivibrio crossotus DSM 2876] gi|292809821|gb|EFF69026.1| proline--tRNA ligase [Butyrivibrio crossotus DSM 2876] Length = 479 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 87/412 (21%), Positives = 163/412 (39%), Gaps = 72/412 (17%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSY 89 M + KG + P G +N+ A + + TG + +P + + L E + + Sbjct: 32 MGYSSVKGCMIFKPAGYAIWENIKAELDKRFKETGVENVYMPMFIPESLLQREKDHVEGF 91 Query: 90 GKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDEL 143 E+ + + + M PT E + D ++ I+SYR+LP + Q +++ E Sbjct: 92 APEVAWVTYGGLNPLQERMCVRPTSETLFCDFYKDEIQSYRDLPKVYNQWCSVVRWEKET 151 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 RP +RSREFL ++ ++ T E ++ +M Y Sbjct: 152 RP---FLRSREFLWQEGHTAHATAEEAEARTQQMLNLY---------------------- 186 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDV 262 AD FC +DF+ P+ TD + A Y + + Sbjct: 187 ----------AD------FC-EDFLAIPVVRGRKTDKEKFAGAE-------ATYTIEALM 222 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM 322 H+ K S G FG ++ + D K YV S+G+ Sbjct: 223 HDGKALQS--------------GTSHNFGDGFAKAFGIQYTDKDNKLKYVHQTSWGM-TT 267 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 R++ A+I D G++ P VAP ++ +I + + ++ +L K G V D Sbjct: 268 RLIGALIMVHGDDSGLVLPPRVAPVQVDIIPVMQKKAGVLEKAAEVKEKLIKAGLRVKVD 327 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 D + G +F+ ++ G P+++ +G + + ++ I R T + +S++E+ Sbjct: 328 DSDKNPGWKFSEQEMRGIPVRIEMGPRDIEANQAVIVRRDTREKTVVSIDEL 379 >gi|212550461|ref|YP_002308778.1| threonyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|229470721|sp|B6YQ95|SYT_AZOPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|212548699|dbj|BAG83367.1| threonyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 648 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 95/465 (20%), Positives = 185/465 (39%), Gaps = 91/465 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+Y + + RD ++ L T H+ +G+ WLP G + + ++ Q + Sbjct: 230 SEYLALMEKAKKRDHRRIGKEMELFT-FSHKVGRGLPLWLPKGTQLRLRLEDFLKRIQKK 288 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND--KAMIYGPTHEEVMTDIFRSH 121 G ++ P + + L++ SG Y YGK+ + + + + P + +I+++ Sbjct: 289 YGYQQVITPHIGNKTLYIASGHYAKYGKDSFQPIHTPELGEEFLLKPMNCPHHCEIYKAF 348 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP + +R E G+ R R F DA+ F +PE K K+ + Sbjct: 349 LRSYKELPLRLAEFGTVYRYERSGELQGLTRVRGFTQDDAHIF-CSPEQVKEELIKV-ID 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +R+ +FC+ +F D+ + D + Sbjct: 407 IVRV------------------------------------IFCALNFNDYEVQISLRDLN 430 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK------- 293 + I E W A +V E K++ A+ I++G ++G K Sbjct: 431 NRIKYIGSEENWKNSEGAIIEVCQE---------KKIKAK-IKLGEAAFYGPKLDFMVKD 480 Query: 294 --------------YSLP--MSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSHDG 335 Y+LP + GAD + H V + G+M R VA +IE + G Sbjct: 481 ALGRNWQLGTIQVDYNLPERFELEYVGADNQKHRPVMIHRAPFGSMERFVAVMIEHT-GG 539 Query: 336 KGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 K +W D V +S + ++Q + ++ + R +V D E++G + Sbjct: 540 KFPLWLVSDQVVILPVS----ENYNQYAEEIAKEFHKRDIRVTI----DKRNEKVGRKIR 591 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 +L P +I+G K +S++ ++ +E++ + +V +A Sbjct: 592 DNELKKIPYLLIIGEKERRNSEISVRKHG---KENIGIMKVTEFA 633 >gi|295706837|ref|YP_003599912.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319] gi|294804496|gb|ADF41562.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319] Length = 645 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 89/389 (22%), Positives = 163/389 (41%), Gaps = 40/389 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S +L+ SG ++ Y +M Sbjct: 266 QGLPLWLPKGATIRRIIERYIVDKEVSLGYQHVYTPVLGSVELYKTSGHWEHYQDDMFPA 325 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + +++ I SYR LP ++ R E+ G+ R R Sbjct: 326 MEMDNEDLVLRPMNCPHHMMVYKQGIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 385 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ ++ G ++ R LS+ D Sbjct: 386 TLNDAHIF-VRPDQIKEEFIRVVRLVEAVYKDFGFENYSFR---------LSYR-----D 430 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M S D D + L+ E A Y DV ++ +L + Sbjct: 431 PADTEKYFDDDAMWEKAQSMLKDAMDELDLDYYEAEGEAAFYGPKLDV---QVKTALGKE 487 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 488 ETLSTVQLD----FLLPERFDL----TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY 539 Query: 333 HDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ +I + H Q ++ E+ L G V D E+IG Sbjct: 540 ---KG-AFPTWLAPVQVQVIPVSPTVHLQYAKEVQEQ----LQLAGIRVELDSRDEKIGY 591 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + A + P ++VG K V D V ++ Sbjct: 592 KIREAQMQKIPYMLVVGDKEVEDKAVNVR 620 >gi|163938386|ref|YP_001643270.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|163860583|gb|ABY41642.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] Length = 476 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 163/406 (40%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ +G + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKESGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAMI----YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ ++ PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLVERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + L I + Sbjct: 153 LRTTEFLWQEGHTIHETAEESQ-------IETLNILNLYA-------------------- 185 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC ++++ P I + T+ + A Y S +H+ Sbjct: 186 -----------AFC-EEYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + + ++ R+ KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATELQGRIQKVA-RVKIDVSNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|304382923|ref|ZP_07365405.1| threonine--tRNA ligase [Prevotella marshii DSM 16973] gi|304335948|gb|EFM02196.1| threonine--tRNA ligase [Prevotella marshii DSM 16973] Length = 654 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 92/408 (22%), Positives = 157/408 (38%), Gaps = 49/408 (12%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R+ Q G E+ P + S +L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTELRLRLQGMLRKIQKNYGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + ++F +SY++LP + +R E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEVFSWKPRSYKDLPLRIAEFGTVYRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F PE K + ++ +F K++ + I L Sbjct: 383 SFTQDDAHIF-CRPEQVKSEFLRVMDIIQTVFKVFDFKNVEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D + E+++ SI+E + E F Sbjct: 428 RDPNDREKYIGSDEV-----WEHSE-------QSIIEACKEKGLNAKIAYGEAAFYGPKL 475 Query: 274 NKRVSARGIEVGHIFYFGT---KYSLPMSATFKGA---DGKDHYVQMGSYGIGAMRVVAA 327 + V +G + GT Y+LP + + K V + G+M A Sbjct: 476 DFMVKD---AIGRRWQLGTIQVDYNLPQRFKLEYTADDNSKQTPVMIHRAPFGSMERFTA 532 Query: 328 VIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 V+ G +W PD VA IS + D K+ L VG D+ Sbjct: 533 VLIEHTAGHFPLWLTPDQVAILPIS--------EKFNDYARKVAHYLDSVGVRANIDERN 584 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 E+IG + ++ P VIVG K ++ V ++ + G + MS+E+ Sbjct: 585 EKIGRKIRDNEIKRVPYMVIVGEKEAAEGLVSMRKQGGGEQATMSMED 632 >gi|325982725|ref|YP_004295127.1| threonyl-tRNA synthetase [Nitrosomonas sp. AL212] gi|325532244|gb|ADZ26965.1| threonyl-tRNA synthetase [Nitrosomonas sp. AL212] Length = 635 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 84/400 (21%), Positives = 162/400 (40%), Gaps = 52/400 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R + G E+ P + DLWV SG ++++ + Sbjct: 255 MQDEASGMVFWHPKGWTLWQQIEQYMRNILSHNGYHEIRTPQILDKDLWVRSGHWENFRE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + +++ P + IF ++SYR LP F + R+E G+M Sbjct: 315 NMF-ITHSDERDFAIKPMNCPGHVQIFNQGLRSYRELPIRFAEFGSCHRNEASGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI-FHRLGLKSIPMRAESGPIGGDLSHE 209 R R F DA+ F E F+ L+I + G + I ++ + P Sbjct: 374 RVRAFTQDDAHIF--CTEDQIQQEVVEFIDLLKIVYADFGFREILIKLSTRP-------- 423 Query: 210 FIVLADTG-ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 L G E Q S+ ++ +LN + +W + K+ Sbjct: 424 ---LKRVGSEAQWDKSEAALE-------------AALNEVKLEWERQ-PGEGAFYGPKIE 466 Query: 269 DSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAM 322 SL + +G ++ GT +S+P + A + D V + +G++ Sbjct: 467 FSLKDC---------IGRLWQCGTLQLDFSMPDRLGAEYVAEDNSRQVPVMLHRAILGSL 517 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ ++ G +W ++P ++ ++NI + Q+ D +K+ A+L + G D Sbjct: 518 ERFIGILIENYAGALPLW---LSPEQVVVLNI-SRTQI--DYAQKVVAQLKENGVRASLD 571 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E+I + L P Q+IVG + V +K+ +++R+ Sbjct: 572 LRNEKITYKIREHSLQKLPYQIIVGDEEVRANKIAVRNRV 611 >gi|126698152|ref|YP_001087049.1| threonyl-tRNA synthetase [Clostridium difficile 630] gi|254974173|ref|ZP_05270645.1| threonyl-tRNA synthetase [Clostridium difficile QCD-66c26] gi|255091574|ref|ZP_05321052.1| threonyl-tRNA synthetase [Clostridium difficile CIP 107932] gi|255099679|ref|ZP_05328656.1| threonyl-tRNA synthetase [Clostridium difficile QCD-63q42] gi|255313300|ref|ZP_05354883.1| threonyl-tRNA synthetase [Clostridium difficile QCD-76w55] gi|255515991|ref|ZP_05383667.1| threonyl-tRNA synthetase [Clostridium difficile QCD-97b34] gi|255649082|ref|ZP_05395984.1| threonyl-tRNA synthetase [Clostridium difficile QCD-37x79] gi|306519197|ref|ZP_07405544.1| threonyl-tRNA synthetase [Clostridium difficile QCD-32g58] gi|123066930|sp|Q189B8|SYT_CLOD6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|115249589|emb|CAJ67406.1| Threonyl-tRNA synthetase [Clostridium difficile] Length = 639 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 99/424 (23%), Positives = 165/424 (38%), Gaps = 45/424 (10%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI + G +LP G + + + RE + G IE+ P + + LW SG + Y Sbjct: 254 MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILNRKLWETSGHWYHY- 312 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +D+ P + + S + SYR+ P ++ R EL G+ Sbjct: 313 KENMYTVKIDDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMRVAELGRVHRHELSGALQGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 MR R F D++ F + PE K + I+ G + + R E+ +G D Sbjct: 373 MRVRAFTQDDSHIF-MLPEQIKDEIKGVANLIDGIYKTFGFEYNLELSTRPENS-MGSDE 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E A+ G + + + P +I E A Y D H Sbjct: 431 EWE---AAENGLREAL---EELGLPY--------------TINEGDGAFYGPKIDFH--- 467 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVV 325 L D L R + G I + T+ G DG+ H V + G++ Sbjct: 468 LKDCL-------GRTWQCGTI-QLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + GK +W ++P ++ ++ I D+ D ++ L G V DD Sbjct: 520 IGILIEHYAGKFPVW---LSPTQVKILPIS--DKFM-DYANEVKKELFDKGIRVELDDRA 573 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 E+IG + A L P +IVG K V+D+ V ++ R G + L+E I S + Sbjct: 574 EKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKEIESR 633 Query: 446 RPVL 449 ++ Sbjct: 634 ESII 637 >gi|260682273|ref|YP_003213558.1| threonyl-tRNA synthetase [Clostridium difficile CD196] gi|260685872|ref|YP_003217005.1| threonyl-tRNA synthetase [Clostridium difficile R20291] gi|260208436|emb|CBA60998.1| threonyl-tRNA synthetase [Clostridium difficile CD196] gi|260211888|emb|CBE02332.1| threonyl-tRNA synthetase [Clostridium difficile R20291] Length = 670 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 99/424 (23%), Positives = 165/424 (38%), Gaps = 45/424 (10%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI + G +LP G + + + RE + G IE+ P + + LW SG + Y Sbjct: 285 MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILNRKLWETSGHWYHY- 343 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +D+ P + + S + SYR+ P ++ R EL G+ Sbjct: 344 KENMYTVKIDDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMRVAELGRVHRHELSGALQGL 403 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 MR R F D++ F + PE K + I+ G + + R E+ +G D Sbjct: 404 MRVRAFTQDDSHIF-MLPEQIKDEIKGVANLIDGIYKTFGFEYNLELSTRPENS-MGSDE 461 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E A+ G + + + P +I E A Y D H Sbjct: 462 EWE---AAENGLREAL---EELGLPY--------------TINEGDGAFYGPKIDFH--- 498 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVV 325 L D L R + G I + T+ G DG+ H V + G++ Sbjct: 499 LKDCL-------GRTWQCGTI-QLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERF 550 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + GK +W ++P ++ ++ I D+ D ++ L G V DD Sbjct: 551 IGILIEHYAGKFPVW---LSPTQVKILPIS--DKFM-DYANEVKKELFDKGIRVELDDRA 604 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 E+IG + A L P +IVG K V+D+ V ++ R G + L+E I S + Sbjct: 605 EKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKEIESR 664 Query: 446 RPVL 449 ++ Sbjct: 665 ESII 668 >gi|189461814|ref|ZP_03010599.1| hypothetical protein BACCOP_02480 [Bacteroides coprocola DSM 17136] gi|189431408|gb|EDV00393.1| hypothetical protein BACCOP_02480 [Bacteroides coprocola DSM 17136] Length = 646 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 96/429 (22%), Positives = 159/429 (37%), Gaps = 67/429 (15%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIGNKLLYVTSGHYAKYGKDAFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + I+++ +SYR+LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCMIYKNTPRSYRDLPLRIAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K + ++ +F +GL++ + I Sbjct: 380 RSFTQDDAHIF-CRPDQVKDEFLRVMDIISIVFKSMGLENFEAQ--------------IS 424 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 L D + + D E W A + EK + Sbjct: 425 LRDKVNREKYIGSD-----------------------ENWEKAEQAIVEACEEKGLKAKV 461 Query: 273 ENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYG 318 E + G + +G + GT Y+LP + G+D + H V + Sbjct: 462 EYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAP 521 Query: 319 IGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 G+M R VA +IE + GK +W PD VA IS + D ++ L K Sbjct: 522 FGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNDYANQVRLELKKS 572 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E+IG + ++ P +IVG K + +V ++ + G + M +E+ Sbjct: 573 DIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVRKQGEGDKGTMKIEDFA 632 Query: 436 NYASHRFSN 444 + N Sbjct: 633 KNVAEEVHN 641 >gi|295397522|ref|ZP_06807604.1| proline--tRNA ligase [Aerococcus viridans ATCC 11563] gi|294974252|gb|EFG49997.1| proline--tRNA ligase [Aerococcus viridans ATCC 11563] Length = 502 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 5/157 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + I+ G Y G ++ F D + YV S+G + R++ A+I D +G+ Sbjct: 238 TKAIQAGTSHYLGQNFAEAFDIKFLNEDNQHTYVHTTSWG-SSTRLIGAMIMIHGDEQGL 296 Query: 339 IWPDSVAPFKISLI---NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 + P VA ++SLI NIK + QV + ++I A LS G V DD G +F + Sbjct: 297 VLPPRVAGTQVSLIPVGNIKKNPQVL-EKLQEIKATLSAAGLRVNLDDSNNSPGYKFNES 355 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 ++ G PL++ G + + +++V IK R +E SL+ Sbjct: 356 EVHGVPLRIEFGPRDMENNQVMIKMRDVDGKEAFSLD 392 >gi|304317243|ref|YP_003852388.1| threonyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778745|gb|ADL69304.1| threonyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 634 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 104/447 (23%), Positives = 174/447 (38%), Gaps = 54/447 (12%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH G + P G + + R+E + G Sbjct: 230 YLNMLEEAKKRDHRKLGKELDLFS--IHNEGPGFPFFHPKGMVIRNILEDFWRKEHAKRG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 +E+ P + + +LW SG +D Y + M D D A+ P + ++ S + S Sbjct: 288 YLEIKTPIILNEELWHRSGHWDHYKENMYFTKIDGEDYAI--KPMNCPGALLVYNSTMHS 345 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTP---EGSKHSYNKMFVS 180 YR+LP ++ L R EL G+MR R F DA+ F +TP E K+ Sbjct: 346 YRDLPLRLCELGLVHRHELSGALHGLMRVRSFTQDDAHLF-MTPDQVESEILGVIKLIDY 404 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + +IF + R E+ IG D E A + +D+ + + F Sbjct: 405 FYKIFGFDYFVELSTRPENS-IGSDEDWELATNALIKAMEHIG----LDYKVNEGDGAF- 458 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--M 298 Y D H L DS+ R + G I + +P Sbjct: 459 ---------------YGPKIDFH---LKDSI-------GRTWQCGTI---QLDFQMPERF 490 Query: 299 SATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + + G DG+ H V + G++ A++ + G +P +AP ++ ++ I Sbjct: 491 NCEYVGQDGEKHRPVMLHRVVFGSIERFIAILTENFAGA---FPTWLAPVQVRILPISDK 547 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + I RL + V DD E+IG + A + P +I+G K V V Sbjct: 548 HLAY---AQNIQQRLLENDIRVELDDRNEKIGYKIREAQMQKIPYMLILGDKEVESGNVS 604 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSN 444 ++ R G S++E ++ N Sbjct: 605 VRSRKDGDIGSKSMQEFLSSILEEIKN 631 >gi|229829763|ref|ZP_04455832.1| hypothetical protein GCWU000342_01860 [Shuttleworthia satelles DSM 14600] gi|229791752|gb|EEP27866.1| hypothetical protein GCWU000342_01860 [Shuttleworthia satelles DSM 14600] Length = 479 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 91/432 (21%), Positives = 171/432 (39%), Gaps = 77/432 (17%) Query: 1 MRRSKYFLPILQENPRDAEIAS-HKLMLRTGMIHQHS--KGIYSWLPLGQKALDNVNAII 57 M + K F+ + PR + A + +++ + Q+S KG + PLG +N+ + Sbjct: 1 MAKDKKFVEEI--TPRSEDFAQWYTDVVKKAELMQYSSLKGFMIYKPLGYAIWENIQKNM 58 Query: 58 REEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLRLADRN----DKAMIYGPTHEE 112 TG + +P L L E+ + + E+ + + + PT E Sbjct: 59 DAMFKETGVENVYMPLLMPESLLKKEAEHVEGFAPEVAWVTQGGIQPLQERLAIRPTSET 118 Query: 113 VMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGS 170 + D++ + ++SYR+LP + Q +++ RP +RS EFL ++ ++ T E + Sbjct: 119 LFCDLYSTIVQSYRDLPKVYNQWCSVVRWEKTTRP---FLRSSEFLWQEGHTAHATAEEA 175 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + +M Y AD FC K ++ Sbjct: 176 EARTIQMLNVY--------------------------------AD------FCEK-YLAI 196 Query: 231 P-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 P I TD + A Y + +H+ K S G Sbjct: 197 PVIKGRKTDKEKFAGAE-------ATYTIETLMHDGKALQS--------------GTSHN 235 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 FG ++ + + + YV S+G+ + R++ A+I D G++ P +AP +I Sbjct: 236 FGDGFARAYGIQYTDKNNQLRYVHQTSWGV-STRLIGAIIMVHGDDSGLVLPPRIAPVQI 294 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 ++ + + + E++ +L K G V DD + G +FA A++ G PL++ VG K Sbjct: 295 VIVPVMQQKEGVLEKAEELRQQLQKAGFSVKLDDSEKSPGWKFAEAEMRGIPLRIEVGPK 354 Query: 410 FVSDSKVEIKHR 421 + +V + R Sbjct: 355 DIEKEQVVMVRR 366 >gi|255654593|ref|ZP_05400002.1| threonyl-tRNA synthetase [Clostridium difficile QCD-23m63] Length = 639 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 97/421 (23%), Positives = 163/421 (38%), Gaps = 39/421 (9%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI + G +LP G + + + RE + G IE+ P + + LW SG + Y Sbjct: 254 MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILNRKLWETSGHWYHY- 312 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +D+ P + + S + SYR+ P ++ R EL G+ Sbjct: 313 KENMYTVKIDDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMRVAELGRVHRHELSGALQGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F D++ F + PE K + I+ G + + + P S+E Sbjct: 373 MRVRAFTQDDSHIF-MLPEQIKDEIKGVANLIDGIYKTFGFE-YNLELSTRPENSMGSNE 430 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 A+ G + + + P +I E A Y D H L D Sbjct: 431 EWEAAENGLREAL---EELGLPY--------------TINEGDGAFYGPKIDFH---LKD 470 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAV 328 L R + G I + T+ G DG+ H V + G++ + Sbjct: 471 CL-------GRTWQCGTI-QLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGI 522 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + GK +W ++P ++ ++ I D+ D ++ L G V DD E+I Sbjct: 523 LIEHYAGKFPVW---LSPTQVKILPIS--DKFM-DYANEVKKELFDKGIRVELDDRAEKI 576 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 G + A L P +IVG K V+D+ V ++ R G + L+E I S + + Sbjct: 577 GFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKEIESRESI 636 Query: 449 L 449 + Sbjct: 637 I 637 >gi|73919786|sp|Q83C10|SYT_COXBU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 651 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 101/435 (23%), Positives = 165/435 (37%), Gaps = 67/435 (15%) Query: 17 DAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+L+ + + H S G W P G + + IR ++ G E+ P Sbjct: 237 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 L A LW +SG + +G ++ L + +I P IF +KSYR+LP + Sbjct: 297 LIDASLWDKSGHLEKFGDDIFSLPLEPQQYVI-KPMSCPAHVQIFNQGVKSYRDLPLRYA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F+ DA+ F E S F+ L Sbjct: 356 EFGACHRNEPSGTLHGLMRLRGFVQDDAHIF--CTEDQIQSEVSAFIDQL---------- 403 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 HE V AD G T+V P + D++ W Sbjct: 404 ---------------HE--VYADFGFTEVIHKLSTR----PEKRVGSDEV---------W 433 Query: 253 TAPYAATSDVHNEK--LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MS 299 T A ++ N K +D LP IE +G I+ GT +S+P + Sbjct: 434 TKAEQALAEALNRKGVEWDILPGEGAFYGPKIEFSLRDCLGRIWQCGTVQVDFSVPERLG 493 Query: 300 ATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + DG K V + +G+ ++ GK +W +AP ++ ++NI Sbjct: 494 AHYIAEDGSKKPPVMIHRAILGSFERFLGILLEESAGKLPLW---LAPVQVVVMNITDRQ 550 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + L +G D E+IG + + P V++G + V+D + + Sbjct: 551 A---DYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVADKTLSV 607 Query: 419 KHRLTGIREDMSLEE 433 + ++LEE Sbjct: 608 RALEDEASTTITLEE 622 >gi|321312429|ref|YP_004204716.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5] gi|291485328|dbj|BAI86403.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] gi|320018703|gb|ADV93689.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5] Length = 643 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 93/406 (22%), Positives = 166/406 (40%), Gaps = 36/406 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S +L+ SG +D Y + M Sbjct: 264 QGLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTPVLGSKELYETSGHWDHYQEGMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I++ I SYR LP ++ R E+ G+ R R Sbjct: 324 MEMDNETLVLRPMNCPHHMMIYKQDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + + ++ GL R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKDEFIRTVRLIQDVYEDFGLSDYTFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M S + D I + E A Y DV ++ ++ + Sbjct: 429 PEDTEKYFDDDEMWNKAQSMLKEAMDEIGHDYYEAEGEAAFYGPKLDV---QVKTAIGKE 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPERFDL----TYIGEDGKQHRPVVIHRGVVSTMERFVAFLIE-E 536 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 H G W +AP + +I + V D +K+ RL + G V D E+IG + Sbjct: 537 HKGALPTW---LAPVQFQVIPVSP--AVHLDYAKKVQERLQREGLRVEVDSRDEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A + P ++VG + + V ++ E +SL+E + A Sbjct: 592 REAQMQKIPYMLVVGDQEAENGAVNVRKYGEQNSETISLDEFVKKA 637 >gi|255305562|ref|ZP_05349734.1| threonyl-tRNA synthetase [Clostridium difficile ATCC 43255] Length = 639 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 99/424 (23%), Positives = 165/424 (38%), Gaps = 45/424 (10%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI + G +LP G + + + RE + G IE+ P + + LW SG + Y Sbjct: 254 MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILNRKLWETSGHWYHY- 312 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +D+ P + + S + SYR+ P ++ R EL G+ Sbjct: 313 KENMYTVKIDDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMRVAELGRVHRHELSGALQGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 MR R F D++ F + PE K + I+ G + + R E+ +G D Sbjct: 373 MRVRAFTQDDSHIF-MLPEQIKDEIKGVANLIDGIYKTFGFEYNLELSTRPENS-MGSDE 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E A+ G + + + P +I E A Y D H Sbjct: 431 EWE---AAENGLREAL---EELGLPY--------------TINEGDGAFYGPKIDFH--- 467 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVV 325 L D L R + G I + T+ G DG+ H V + G++ Sbjct: 468 LKDCL-------GRTWQCGTI-QLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + GK +W ++P ++ ++ I D+ D ++ L G V DD Sbjct: 520 IGILIEHYAGKFPVW---LSPTQVKILPIS--DKFM-DYANEVKKELFDKGIRVELDDRA 573 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 E+IG + A L P +IVG K V+D+ V ++ R G + L+E I S + Sbjct: 574 EKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKEIESR 633 Query: 446 RPVL 449 ++ Sbjct: 634 ESII 637 >gi|229099037|ref|ZP_04229971.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|229118067|ref|ZP_04247426.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228665290|gb|EEL20773.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228684265|gb|EEL38209.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29] Length = 645 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 173/424 (40%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + G DGK H + G+ + R VA +IE KG +P +AP + +I + Sbjct: 506 ---AYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQAQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|332655151|ref|ZP_08420892.1| proline--tRNA ligase [Ruminococcaceae bacterium D16] gi|332516011|gb|EGJ45620.1| proline--tRNA ligase [Ruminococcaceae bacterium D16] Length = 480 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 1/145 (0%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G YFG ++ TF G D + HY S+G+ + R++ +I + D G++ Sbjct: 227 KALQSGTSHYFGDGFARAFDITFTGKDNQLHYPHQTSWGV-STRMIGGIIMTHGDNNGLV 285 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 P +AP + +I + H + DA + RL G D + +G + A ++ G Sbjct: 286 LPPRIAPIQAMVIPVAQHKEGVLDAATDLLNRLKAAGIRASMDASDQSMGWKAAQYEMKG 345 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTG 424 PL+V +G K + + I R +G Sbjct: 346 VPLRVEIGPKDMEKGQCCICRRDSG 370 Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 10/152 (6%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG++ + P G +N+ A + + TG + +P L + L E + + E Sbjct: 39 KGVFIYRPYGYAIWENIQAELDKRFKETGHENVYLPMLIPESLLQKEKDHVEGFAPECAW 98 Query: 96 L----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + +++ ++ PT E + + ++S I S+R+LP + Q L++ RP Sbjct: 99 VTYGGSEKLEERYCIRPTSETLFCEHYKSIIHSHRDLPKLYNQWCSVLRWEKTSRP---F 155 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +R REFL ++ ++ T E ++ +M Y Sbjct: 156 LRHREFLWQEGHTMHATEEEARQETQQMLNIY 187 >gi|237733955|ref|ZP_04564436.1| prolyl-tRNA synthetase [Mollicutes bacterium D7] gi|229383036|gb|EEO33127.1| prolyl-tRNA synthetase [Coprobacillus sp. D7] Length = 479 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 2/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YFG ++ F + K YV S+G+ + R++ A+I D G+ Sbjct: 224 GKALQSGTSHYFGQGFAKAFDMKFLSKENKLEYVYQTSWGV-STRLLGAIIMVHGDNNGL 282 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P VAP ++ +I I+ D +I +L + G V D + G +F+ A++ Sbjct: 283 VLPPRVAPTQVMIIPIQQQKAGVLDKAYEIEKQLKEAGIRVKVDASDKSPGWKFSEAEMR 342 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL-EEVIN 436 G PL++ +G K + ++ I R G +E +L +E+IN Sbjct: 343 GVPLRLEIGPKDIENNACVIAKRNDGTKEKYALDQELIN 381 >gi|330445795|ref|ZP_08309447.1| threonyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489986|dbj|GAA03944.1| threonyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 643 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 90/422 (21%), Positives = 160/422 (37%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G + +RE+ N E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWTIFRELEVFVREKLNEYDYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + + + + Y + G +I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIFCTEAQVQQEVTSCIEMVY-DTYKTFGFDNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E+ + + + M+ P I E A Y + L Sbjct: 433 ----AMWDKAESDLVTALESMNIPF--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + ++LP + AT+ G D + H M I G++ Sbjct: 472 HDCLD-------RAWQCGTV---QLDFALPERLGATYVGEDNERHTPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI + ++I +L K G V D Sbjct: 522 FIGILIEDYAG---FFPTWLAPQQAVVMNIT---DAQSEYVQEIVEKLKKCGIRVNADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++ G K V V ++ R ++E++ + S+ Sbjct: 576 NEKIGFKIREHTLKRVPFMLVCGDKEVEAGVVAVRTRKGKDLGKFKIDELVAFMQEEISS 635 Query: 445 NR 446 + Sbjct: 636 RK 637 >gi|257869188|ref|ZP_05648841.1| threonyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257803352|gb|EEV32174.1| threonyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 646 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 90/416 (21%), Positives = 170/416 (40%), Gaps = 48/416 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + + DL+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMANVDLYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + D ++F + P+ K + + + ++ + R + P D + + Sbjct: 382 TLNDGHTF-VRPDQIKDEFKRTLDLMVEVYKDFNVTDYRFRLSYRDPENKDKYFDDDAMW 440 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + +T + + D + N D+ + E A Y DV ++ +L Sbjct: 441 ENAQTMLKAAMDEL-------NLDYFE-------AEGEAAFYGPKLDV---QVKTALGME 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 484 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I ++ AH D +I RL G V DD E++G Sbjct: 536 YKGAFPTW---LAPIQATIIPVSVDAHS----DYAYEIKERLQSQGLRVEVDDRNEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIRE-----DMSLEEVINYA 438 + + + P Q++VG + V D+ V I+ + T + E D EV NY+ Sbjct: 589 KIRASQMQKIPYQLVVGDQEVKDATVNIRRYGSKETNVEELNIFVDAMAAEVKNYS 644 >gi|257438845|ref|ZP_05614600.1| proline--tRNA ligase [Faecalibacterium prausnitzii A2-165] gi|257198660|gb|EEU96944.1| proline--tRNA ligase [Faecalibacterium prausnitzii A2-165] Length = 479 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 82/155 (52%), Gaps = 2/155 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G YFG K+S TF G D + H+ S+G+ + R+V A+I + D G+I Sbjct: 227 KALQSGTSHYFGDKFSKAYDVTFTGRDNQLHHPFQTSWGV-STRLVGAIIMTHGDDDGLI 285 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 P +VAP ++ ++ I AH + ++ ++SK V DD G +F+ ++ G Sbjct: 286 LPPAVAPIQVVVVPIAAHKPGVSEKAAELAEKISKYA-RVKLDDSDNAPGWKFSQWEMKG 344 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 PL++ +G K + ++ + R T + +SL+E+ Sbjct: 345 VPLRLEIGPKDLEKNQCVLVRRDTREKIFVSLDEL 379 >gi|228987823|ref|ZP_04147932.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229158179|ref|ZP_04286246.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228625137|gb|EEK81897.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228771871|gb|EEM20328.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 645 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 173/424 (40%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + G DGK H + G+ + R VA +IE KG +P +AP + +I + Sbjct: 506 ---AYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQAQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|167756667|ref|ZP_02428794.1| hypothetical protein CLORAM_02205 [Clostridium ramosum DSM 1402] gi|167702842|gb|EDS17421.1| hypothetical protein CLORAM_02205 [Clostridium ramosum DSM 1402] Length = 479 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 2/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YFG ++ F + K YV S+G+ + R++ A+I D G+ Sbjct: 224 GKALQSGTSHYFGQGFAKAFDMKFLSKENKLEYVYQTSWGV-STRLLGAIIMVHGDNNGL 282 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P VAP ++ +I I+ D +I +L + G V D + G +F+ A++ Sbjct: 283 VLPPRVAPTQVMIIPIQQQKAGVLDKAYEIEKQLKEAGIRVKVDASDKSPGWKFSEAEMR 342 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL-EEVIN 436 G PL++ +G K + ++ I R G +E +L +E+IN Sbjct: 343 GVPLRLEIGPKDIENNACVIAKRNDGTKEKYALDQELIN 381 >gi|296449369|ref|ZP_06891150.1| threonine--tRNA ligase [Clostridium difficile NAP08] gi|296880697|ref|ZP_06904650.1| threonine--tRNA ligase [Clostridium difficile NAP07] gi|296261715|gb|EFH08529.1| threonine--tRNA ligase [Clostridium difficile NAP08] gi|296428315|gb|EFH14209.1| threonine--tRNA ligase [Clostridium difficile NAP07] Length = 670 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 97/421 (23%), Positives = 163/421 (38%), Gaps = 39/421 (9%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI + G +LP G + + + RE + G IE+ P + + LW SG + Y Sbjct: 285 MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILNRKLWETSGHWYHY- 343 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +D+ P + + S + SYR+ P ++ R EL G+ Sbjct: 344 KENMYTVKIDDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMRVAELGRVHRHELSGALQGL 403 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F D++ F + PE K + I+ G + + + P S+E Sbjct: 404 MRVRAFTQDDSHIF-MLPEQIKDEIKGVANLIDGIYKTFGFE-YNLELSTRPENSMGSNE 461 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 A+ G + + + P +I E A Y D H L D Sbjct: 462 EWEAAENGLREAL---EELGLPY--------------TINEGDGAFYGPKIDFH---LKD 501 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAV 328 L R + G I + T+ G DG+ H V + G++ + Sbjct: 502 CL-------GRTWQCGTI-QLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGI 553 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + GK +W ++P ++ ++ I D+ D ++ L G V DD E+I Sbjct: 554 LIEHYAGKFPVW---LSPTQVKILPIS--DKFM-DYANEVKKELFDKGIRVELDDRAEKI 607 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 G + A L P +IVG K V+D+ V ++ R G + L+E I S + + Sbjct: 608 GFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKEIESRESI 667 Query: 449 L 449 + Sbjct: 668 I 668 >gi|315303326|ref|ZP_07873955.1| threonyl-tRNA synthetase [Listeria ivanovii FSL F6-596] gi|313628306|gb|EFR96810.1| threonyl-tRNA synthetase [Listeria ivanovii FSL F6-596] Length = 640 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 91/436 (20%), Positives = 182/436 (41%), Gaps = 38/436 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K F+ + +E RD +L L T I + +G+ WLP G + I +++ R Sbjct: 228 KEFIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEER 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I Sbjct: 287 LGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ L R E+ G+ R R + DA+ F + P+ K + ++ L Sbjct: 347 SYRELPIRIAELGLMHRYEMSGALSGLQRVRGMTLNDAHVF-VRPDQIKDEFKRVVELIL 405 Query: 183 RIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ + R + P + + + D +T + + D M + + Sbjct: 406 EVYKDFDITDYSFRLSYRDPKNTEKYFDDDAMWDKAQTMLKSAMDEMGMDYFEADGE--- 462 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y DV ++ ++ + + +S ++ F ++ L T Sbjct: 463 -----------AAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----T 500 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + DG+ H + G+ + R VA +IE KG +P +AP ++ LI + A Sbjct: 501 YIAEDGEKHRPVVIHRGVVSTMERFVAYLIEEY---KG-AFPTWLAPVQMELIPVNADAH 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + D + + +L + G V DD E++G + A P +++G + + V ++ Sbjct: 557 L--DYAKGVQDKLQRAGLRVEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMESGTVNVR 614 Query: 420 HRLTGIREDMSLEEVI 435 + E M L++ I Sbjct: 615 RYGSKDSETMDLDKFI 630 >gi|260062396|ref|YP_003195476.1| threonyl-tRNA synthetase [Robiginitalea biformata HTCC2501] gi|88783959|gb|EAR15130.1| threonyl-tRNA synthetase [Robiginitalea biformata HTCC2501] Length = 646 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 91/432 (21%), Positives = 170/432 (39%), Gaps = 65/432 (15%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T H+ +G+ WLP G + + +++ Q + G Sbjct: 231 YLHMLEEAKKRDHRKLGKELELFT-FSHKVGQGLPLWLPKGAALRERLEQFLKKAQKKAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +L+V SG Y YG++ + R D+ + P + +IF + Sbjct: 290 YEMVVTPHIGQKELYVTSGHYAKYGEDSFQPIHTPREDEEFLLKPMNCPHHCEIFNATPV 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP F + +R E G+ R R F DA+ F T + + + L Sbjct: 350 SYRDLPKRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CTHDQLDEEFKNVIDLSL 408 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + LG ++ + + + D + + + + Sbjct: 409 YVLGSLGFENFTAQ--------------VSIRDPEKPEKYIGE----------------- 437 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT-- 292 VE W AA EK D + E + G + +G + GT Sbjct: 438 ------VENWEKAEAAIIHAATEKGLDFVIEPGEAAFYGPKLDFMVKDALGRQWQLGTIQ 491 Query: 293 -KYSLP--MSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPF 347 Y+LP T+KG+D + H V + G+M R VA ++E + G +P + P Sbjct: 492 VDYTLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFVALLLEHT----GGNFPLWLTPQ 547 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + ++ + + + +K+ L D E +G + A++ +P +IVG Sbjct: 548 QAIVLPVSEKHE---NYAQKVLNSLENHEIRALLDARSETVGKKIREAEMGKYPFMIIVG 604 Query: 408 SKFVSDSKVEIK 419 + ++D + ++ Sbjct: 605 DQEMTDGTISVR 616 >gi|229032221|ref|ZP_04188194.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271] gi|229076078|ref|ZP_04209046.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-18] gi|229105203|ref|ZP_04235852.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228678129|gb|EEL32357.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228706941|gb|EEL59146.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-18] gi|228729001|gb|EEL80004.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271] Length = 645 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 173/424 (40%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPADTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + G DGK H + G+ + R VA +IE KG +P +AP + +I + Sbjct: 506 ---AYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQAQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|218260218|ref|ZP_03475604.1| hypothetical protein PRABACTJOHN_01265 [Parabacteroides johnsonii DSM 18315] gi|218224670|gb|EEC97320.1| hypothetical protein PRABACTJOHN_01265 [Parabacteroides johnsonii DSM 18315] Length = 526 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 88/166 (53%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G + TF +GK+ Y S+G+ + R++ A+I S D G+ Sbjct: 269 GKALQAGTSHFLGQNFGKAFDVTFIDKNGKNEYAWATSWGV-STRLIGALIMSHSDDNGL 327 Query: 339 IWPDSVAPFKISLINI-KAHDQVCR--DACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ +I I ++ +Q+ + + I A+L +G V +DD ++ G +FA Sbjct: 328 VLPPHLAPIQVVIIPIYRSAEQLAQISEKVNGIVAKLKALGISVKFDDADNKKPGWKFAE 387 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++ +G + + ++ +E+ R T +E ++ + + Y + Sbjct: 388 YELKGVPVRLAMGGRDLENNTIEVMRRDTLEKETVTCDNIETYVQN 433 Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +R+ I+SYR+LP Q R E+R R +R+ EFL Sbjct: 147 AAKLEEELIIRPTSETIIWNTYRNWIQSYRDLPILCNQWANVMRWEMRTRL-FLRTAEFL 205 Query: 157 MKDAYSFDLTPEGSKHSYNKM 177 ++ ++ T E ++ KM Sbjct: 206 WQEGHTAHATREEAEIEAKKM 226 >gi|162316930|ref|YP_424303.2| prolyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|114152214|sp|Q2SSG0|SYP_MYCCT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 474 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/392 (20%), Positives = 158/392 (40%), Gaps = 73/392 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEM-- 93 KG + P G + + + + EE + + P L L+ E D + E+ Sbjct: 35 KGTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIDGFSPEIAT 94 Query: 94 -LRLADRN-DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 R+ + ++ + PT E +M D F + I SYR+LP + Q +++ RP Sbjct: 95 VTRVGQKQLEENLFIRPTSEVLMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTTRP---F 151 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ SYN+ L+I + I + E Sbjct: 152 LRTSEFLWQEGHTV-------HSSYNEAENFCLKILN---------------IYEKFAKE 189 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 ++L V C K +E F A D + Sbjct: 190 ILLLP------VICGK-------KTEKEKF-----------------AGAKDTYT----- 214 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 E+ + ++ G +F ++ F+ + K + S+G+ + R++ A+I Sbjct: 215 --IESLMFDGQALQCGTSHFFADNFTKVYDIKFQNKENKLEHAYSTSWGV-STRLIGALI 271 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + D G++ P ++P ++ +I IK +Q+ E I +LS DV D+ + G Sbjct: 272 MTHSDDNGLVLPSKISPIQVQIIQIKNTEQI-DQVVEIIKDKLSDYRIDV--DNSDKSFG 328 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + A++ G P+++ +G + + ++++ I R Sbjct: 329 FKISEAEIKGIPIRIEIGPRDLENNQITISRR 360 >gi|254831960|ref|ZP_05236615.1| threonyl-tRNA synthetase [Listeria monocytogenes 10403S] Length = 640 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 85/403 (21%), Positives = 169/403 (41%), Gaps = 36/403 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ R G + P + + +L+ SG +D Y ++M Sbjct: 260 QGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPT 319 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P + I+++ I SYR LP ++ + R E+ G+ R R Sbjct: 320 MKMDNEELVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ L ++ +K R LS+ D Sbjct: 380 TLNDAHVF-VRPDQIKDEFKRVVELILEVYKDFDIKDYSFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M + D + ++ E A Y DV ++ ++ + Sbjct: 425 PKNTEKYFDDDAMWEKAQAMLKSAMDEMEMDYFEAEGEAAFYGPKLDV---QVKTAIGKE 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DG+ H + G+ + R VA +IE Sbjct: 482 ETLSTVQLD----FLLPERFDL----TYIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY 533 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ +I + A + D + + +L + G DD E++G + Sbjct: 534 ---KG-AFPTWLAPVQMEIIPVNADAHL--DYAKGVQDKLQRAGLRAEVDDRNEKLGYKI 587 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A P +++G + V V ++ + E M L+ I Sbjct: 588 REAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFI 630 >gi|116490538|ref|YP_810082.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Oenococcus oeni PSU-1] gi|116091263|gb|ABJ56417.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Oenococcus oeni PSU-1] Length = 663 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 91/410 (22%), Positives = 169/410 (41%), Gaps = 43/410 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + E++ + G + + P + + DL+ SG +D Y +M Sbjct: 267 GLPVWLPNGAAIRRTIEDYLVEKERQNGYMNVYTPVVSNLDLYKRSGHWDHYRDDMFPAM 326 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI-QLKFRDELRPRFGVMRSREF 155 +D + + P + +IF +SYR+LP+ + Q+ ++ G+ R RE Sbjct: 327 TADDGEQLELRPMNCPSHIEIFEHEPRSYRDLPYRIAEFGQMHRWEKSGALTGLSRVREM 386 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF-IVLA 214 + D ++ + PE + + + ++H G D + F + Sbjct: 387 TLNDGHTV-VAPEQVEPEFKGILQLIRDVYHDFGFT-------------DQDYRFRLSYR 432 Query: 215 DTGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D T+ + D M + + DD+ E A Y D+ + +L Sbjct: 433 DPKNTKKYYDDDAMWEHAQAALKRAMDDMGLDYFEAEGEAAFYGPKLDI---QFKTALGN 489 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESS 332 + +S ++ F KY+ G DGKDH + G +G M A + Sbjct: 490 EETMSTIQLDFLLPERFDMKYT--------GEDGKDHRPVLIHRGVVGTMERFVAFLIEK 541 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G+ W +AP + +I N AH R+ IY++L K G + D+ E++G Sbjct: 542 YKGQFPTW---LAPVQAVVIPVNYGAHGDYARN----IYSKLMKDGRRIKLDNRDEKLGY 594 Query: 391 QFAVADL-LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL---EEVIN 436 A + L P ++VG + + D+ V ++ R + ++M + EE+IN Sbjct: 595 LIRDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTKEMKIDEFEEMIN 644 >gi|219850181|ref|YP_002464614.1| YbaK/prolyl-tRNA synthetase associated region [Chloroflexus aggregans DSM 9485] gi|219544440|gb|ACL26178.1| YbaK/prolyl-tRNA synthetase associated region [Chloroflexus aggregans DSM 9485] Length = 531 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 8/164 (4%) Query: 260 SDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + D P R+ G VG I + +LP+ + A G++ + + Sbjct: 346 ADIAQAVVGDPCPRCGTARIEGYGAAVGTI-TAPYQTALPI----QDAGGQNRPLWIAGI 400 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 + ++ +E HD +GI+WP ++AP I L+ I + V A + L G Sbjct: 401 ELDLEPLIHLGVEQHHDERGIVWPAAIAPVDIHLVTIGRGEAVV-TAAHTLATELRNAGW 459 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 V DD E+ G +F ADL+G P +++V K ++ +VE++ R Sbjct: 460 SVLIDDRDERAGVKFNDADLIGAPWRLVVSEKLLAAGQVEVRRR 503 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 31/146 (21%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ + F L++ P +A+ + +L+ R GM+ + G LPLG L + AI+ Sbjct: 1 MQLATLFGRTLRQAPAEADTLATQLLWRAGMLRTLNDGEPVLLPLGSAILRRLAAILGTA 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ VPT +A W + +T + R Sbjct: 61 VQNDGAQEIVVPTTTTAS-W------------------------------SDTVTALARR 89 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR 146 I SYR LP + + + R RPR Sbjct: 90 DIDSYRQLPQLLWSWRRRKRLATRPR 115 >gi|307565532|ref|ZP_07628012.1| proline--tRNA ligase [Prevotella amnii CRIS 21A-A] gi|307345691|gb|EFN91048.1| proline--tRNA ligase [Prevotella amnii CRIS 21A-A] Length = 493 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 87/166 (52%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGV-STRLIGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ +I I K +Q+ ++ + + L + G V +DD ++ G +FA Sbjct: 295 VLPPKIAPIQVVIIPIFKGEEQLEQLKNKLQPVIDELREAGVTVKFDDSDNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++ +G + + ++ +E+ R T +E +S + + +Y H Sbjct: 355 YELKGVPVRLAMGGRDLENNTIEVMRRDTLEKESVSFDGITDYIKH 400 >gi|116754929|ref|YP_844047.1| prolyl-tRNA synthetase [Methanosaeta thermophila PT] gi|121694244|sp|A0B9N3|SYP_METTP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116666380|gb|ABK15407.1| prolyl-tRNA synthetase [Methanosaeta thermophila PT] Length = 478 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 3/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++VG GT ++ T++ G+ YV YGI R +AA+I D KG+ Sbjct: 225 GRTLQVGTAHLLGTNFAKTYEITYEDEHGEQRYVNQTCYGISE-RCIAALIAVHGDDKGL 283 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 + P VAP ++ ++ I + + C I + L+ V DD E+ G++F ++ Sbjct: 284 VLPWRVAPVQVVIVPIIFGEREPIIEVCRSIASTLAGRNIRVRLDDGDERPGAKFYKWEM 343 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G P+++ +G + + + V I R G+R+ + ++E Sbjct: 344 RGVPVRIEIGPRDIKNGVVTIVRR-DGVRKTLPMDE 378 Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 7/163 (4%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+ W P G +V II+E + E P L + E+ + E+ Sbjct: 38 KGMSVWYPFGFALRSHVYQIIKELLD-VDHYETQFPLLIPETEFMKEAEHIKGFEDEVYW 96 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D D + PT E + + + I+S+ +LP YQI FR E + ++R Sbjct: 97 VTHGGRDPLDIKLALRPTSETAIYPMLKLWIRSHADLPLRIYQIVNTFRYETKHTRPLIR 156 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 RE K+A++ T E + Y+ + RL + + Sbjct: 157 LREITSFKEAHTAHATWEEAAMQVEIAIQRYIEFYRRLAIPCL 199 >gi|165924098|ref|ZP_02219930.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 334] gi|165916454|gb|EDR35058.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 334] Length = 653 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 101/435 (23%), Positives = 165/435 (37%), Gaps = 67/435 (15%) Query: 17 DAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+L+ + + H S G W P G + + IR ++ G E+ P Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 L A LW +SG + +G ++ L + +I P IF +KSYR+LP + Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSLPLEPQQYVI-KPMSCPAHVQIFNQGVKSYRDLPLRYA 364 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F+ DA+ F E S F+ L Sbjct: 365 EFGACHRNEPSGTLHGLMRLRGFVQDDAHIF--CTEDQIQSEVSAFIDQL---------- 412 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 HE V AD G T+V P + D++ W Sbjct: 413 ---------------HE--VYADFGFTEVIHKLSTR----PEKRVGSDEV---------W 442 Query: 253 TAPYAATSDVHNEK--LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MS 299 T A ++ N K +D LP IE +G I+ GT +S+P + Sbjct: 443 TKAEQALAEALNRKGVEWDILPGEGAFYGPKIEFSLRDCLGRIWQCGTVQVDFSVPERLG 502 Query: 300 ATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + DG K V + +G+ ++ GK +W +AP ++ ++NI Sbjct: 503 AHYIAEDGSKKPPVMIHRAILGSFERFLGILLEESAGKLPLW---LAPVQVVVMNITDRQ 559 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + L +G D E+IG + + P V++G + V+D + + Sbjct: 560 A---DYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVADKTLSV 616 Query: 419 KHRLTGIREDMSLEE 433 + ++LEE Sbjct: 617 RALEDEASTTITLEE 631 >gi|229163567|ref|ZP_04291517.1| Threonyl-tRNA synthetase [Bacillus cereus R309803] gi|228619949|gb|EEK76825.1| Threonyl-tRNA synthetase [Bacillus cereus R309803] Length = 646 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 87/387 (22%), Positives = 165/387 (42%), Gaps = 36/387 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S +L+ SG ++ Y M Sbjct: 267 QGLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPS 326 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + ++++ I SYR LP ++ R E+ G+ R R Sbjct: 327 MEMDNEELVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 386 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K ++ L ++ GL++ R LS+ D Sbjct: 387 TLNDAHIF-VRPDQIKEELKRVVNLTLEVYKDFGLENYSFR---------LSYR-----D 431 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + + D M + D + L+ E A Y DV ++ +L ++ Sbjct: 432 PADTKKYYADDEMWEKAQGMLKEAMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKD 488 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L + G DGK H + G+ + R VA +IE Sbjct: 489 ETLSTVQLD----FLLPERFEL----AYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY 540 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP + +I + QV D +K+ L + G V D E+IG + Sbjct: 541 ---KG-AFPTWLAPVQAQVIPVSP--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKI 594 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIK 419 A + P ++VG V+++ V ++ Sbjct: 595 REAQMQKIPYMLVVGDNEVTENGVNVR 621 >gi|212212292|ref|YP_002303228.1| threonyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] gi|212010702|gb|ACJ18083.1| threonyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] Length = 660 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 104/440 (23%), Positives = 168/440 (38%), Gaps = 77/440 (17%) Query: 17 DAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+L+ + + H S G W P G + + IR ++ G E+ P Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 L A LW +SG + +G ++ L + +I P IF +KSYR+LP + Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSLPLEPQQYVI-KPMSCPAHVQIFNQGVKSYRDLPLRYA 364 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F+ DA+ F E S F+ L Sbjct: 365 EFGACHRNEPSGTLHGLMRLRGFVQDDAHIF--CTEDQIQSEVSAFIDQL---------- 412 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 HE V AD G T+V P + D++ W Sbjct: 413 ---------------HE--VYADFGFTEVIHKLSTR----PEKRVGSDEV---------W 442 Query: 253 TAPYAATSDVHNEK--LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MS 299 T A ++ N K +D LP IE +G I+ GT +S+P + Sbjct: 443 TKAEQALAEALNRKGVEWDILPGEGAFYGPKIEFSLRDCLGRIWQCGTVQVDFSVPERLG 502 Query: 300 ATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 A + DG H +GS+ R + ++E S GK +W +AP ++ ++N Sbjct: 503 AHYIAEDGSKKPPVMIHRAILGSF----ERFLGILLEESA-GKLPLW---LAPVQVVVMN 554 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I D + L +G D E+IG + + P V++G + V+D Sbjct: 555 ITDRQA---DYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVAD 611 Query: 414 SKVEIKHRLTGIREDMSLEE 433 + ++ ++LEE Sbjct: 612 KTLSVRALEDEASTTITLEE 631 >gi|254828206|ref|ZP_05232893.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258600595|gb|EEW13920.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] Length = 640 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 94/436 (21%), Positives = 182/436 (41%), Gaps = 38/436 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K F+ + +E RD +L L T I + +G+ WLP G + I +++ R Sbjct: 228 KEFIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEER 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I Sbjct: 287 LGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ + R E+ G+ R R + DA+ F + P+ K + ++ L Sbjct: 347 SYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVF-VRPDQIKDEFKRVVELIL 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + R LS+ D T+ + D M + D Sbjct: 406 EVYKDFDITDYSFR---------LSYR-----DPKNTEKYFDDDAMWEKAQAMLKSAMDE 451 Query: 243 ISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + ++ E A Y DV ++ ++ + + +S ++ F ++ L T Sbjct: 452 MEMDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----T 500 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG+ H + G+ + R VA +IE KG +P +AP ++ LI + A Sbjct: 501 YIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY---KG-AFPTWLAPVQMELIPVNADAH 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + D + + +L + G DD E++G + A P +++G + V V ++ Sbjct: 557 L--DYAKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVR 614 Query: 420 HRLTGIREDMSLEEVI 435 + E M L+ I Sbjct: 615 RYGSKDSETMDLDAFI 630 >gi|229015779|ref|ZP_04172758.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1273] gi|229021987|ref|ZP_04178545.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1272] gi|228739314|gb|EEL89752.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1272] gi|228745536|gb|EEL95559.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1273] Length = 476 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 160/406 (39%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ +G + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKESGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + + ++ R+ KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATELQGRIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|115608274|ref|XP_001177835.1| PREDICTED: similar to Prolyl-tRNA synthetase (mitochondrial)(putative), partial [Strongylocentrotus purpuratus] gi|115609661|ref|XP_794293.2| PREDICTED: similar to Prolyl-tRNA synthetase (mitochondrial)(putative), partial [Strongylocentrotus purpuratus] Length = 89 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 1/88 (1%) Query: 48 KALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG 107 +AL+ + +I E + G ++++P + + LW SGRY YG E++ L DR++ G Sbjct: 2 RALEKLIKVIDTEMQKVGGQKIAMPGMTPSSLWKTSGRYSDYGPELITLQDRHNVDYCLG 61 Query: 108 PTHEEVMTDIFRSH-IKSYRNLPFTFYQ 134 PTHEE +TDI S++ LP YQ Sbjct: 62 PTHEEAVTDIVAGEKTLSHKRLPIKLYQ 89 >gi|215919162|ref|NP_820316.2| threonyl-tRNA synthetase [Coxiella burnetii RSA 493] gi|206584046|gb|AAO90830.2| threonyl-tRNA synthetase [Coxiella burnetii RSA 493] Length = 660 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 104/440 (23%), Positives = 168/440 (38%), Gaps = 77/440 (17%) Query: 17 DAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+L+ + + H S G W P G + + IR ++ G E+ P Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 L A LW +SG + +G ++ L + +I P IF +KSYR+LP + Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSLPLEPQQYVI-KPMSCPAHVQIFNQGVKSYRDLPLRYA 364 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F+ DA+ F E S F+ L Sbjct: 365 EFGACHRNEPSGTLHGLMRLRGFVQDDAHIF--CTEDQIQSEVSAFIDQL---------- 412 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 HE V AD G T+V P + D++ W Sbjct: 413 ---------------HE--VYADFGFTEVIHKLSTR----PEKRVGSDEV---------W 442 Query: 253 TAPYAATSDVHNEK--LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MS 299 T A ++ N K +D LP IE +G I+ GT +S+P + Sbjct: 443 TKAEQALAEALNRKGVEWDILPGEGAFYGPKIEFSLRDCLGRIWQCGTVQVDFSVPERLG 502 Query: 300 ATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 A + DG H +GS+ R + ++E S GK +W +AP ++ ++N Sbjct: 503 AHYIAEDGSKKPPVMIHRAILGSF----ERFLGILLEESA-GKLPLW---LAPVQVVVMN 554 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I D + L +G D E+IG + + P V++G + V+D Sbjct: 555 ITDRQA---DYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVAD 611 Query: 414 SKVEIKHRLTGIREDMSLEE 433 + ++ ++LEE Sbjct: 612 KTLSVRALEDEASTTITLEE 631 >gi|111115231|ref|YP_709849.1| prolyl-tRNA synthetase [Borrelia afzelii PKo] gi|123145721|sp|Q0SNA5|SYP_BORAP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|110890505|gb|ABH01673.1| prolyl-tRNA synthetase [Borrelia afzelii PKo] Length = 488 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 93/414 (22%), Positives = 166/414 (40%), Gaps = 85/414 (20%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAMI----YGPTHEEVMTDIF 118 TG P L L E D + E + D ++++ PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYGFLEKEKDHIDGFSPEFAIIKDAGGESLVEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVIRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SEN Sbjct: 174 LLILDVYKRF------------------------MEDYLAIPVFCGK-------KSENEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S S+ ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSV--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG+I P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMKHVFASSWGV-STRLIGALIMVHSDEKGLILPPRIAPVEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVG 407 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG Sbjct: 298 DEINKKILDYSDCVVHTLKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRIEVG 351 >gi|229009880|ref|ZP_04167100.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048] gi|228751498|gb|EEM01304.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048] Length = 476 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 162/406 (39%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ +G + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKESGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + L I + Sbjct: 153 LRTTEFLWQEGHTIHETAEESQ-------IETLNILNLYA-------------------- 185 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC ++++ P I + T+ + A Y S +H+ Sbjct: 186 -----------AFC-EEYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + + ++ R+ KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATELQGRIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|216263860|ref|ZP_03435854.1| prolyl-tRNA synthetase [Borrelia afzelii ACA-1] gi|215979904|gb|EEC20726.1| prolyl-tRNA synthetase [Borrelia afzelii ACA-1] Length = 488 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 93/414 (22%), Positives = 166/414 (40%), Gaps = 85/414 (20%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAMI----YGPTHEEVMTDIF 118 TG P L L E D + E + D ++++ PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYGFLEKEKDHIDGFSPEFAIIKDAGGESLVEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVIRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SEN Sbjct: 174 LLILDVYKRF------------------------MEDYLAIPVFCGK-------KSENEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S S+ ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSV--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG+I P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMKHVFASSWGV-STRLIGALIMVHSDEKGLILPPRIAPVEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVG 407 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG Sbjct: 298 DEINKKILDYSDCVVHTLKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRIEVG 351 >gi|260911765|ref|ZP_05918337.1| proline-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] gi|260634091|gb|EEX52209.1| proline-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] Length = 493 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 5/158 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGV-STRLIGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ +I I D+ + K + +L KVG V +DD ++ G ++A Sbjct: 295 VLPPRLAPIQVVVIPIGKGDEQMKAIANKLQPVIEQLRKVGVTVKYDDSDNKRPGFKYAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +L G P++V++G + + ++ VEI R T +E + E Sbjct: 355 YELKGIPVRVVMGGRDLENNTVEIMRRDTLEKETIGFE 392 Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ I+S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEELIIRPTSETIIWNTYKNWIQSWRDLPLMCNQWCNVMRWEMRTR-PFLRTSEFLWQEG 176 Query: 161 YSFDLT 166 ++ T Sbjct: 177 HTAHAT 182 >gi|284801950|ref|YP_003413815.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284995092|ref|YP_003416860.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|284057512|gb|ADB68453.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284060559|gb|ADB71498.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5923] Length = 640 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 94/436 (21%), Positives = 182/436 (41%), Gaps = 38/436 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K F+ + +E RD +L L T I + +G+ WLP G + I +++ R Sbjct: 228 KEFIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEER 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I Sbjct: 287 LGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ L R E+ G+ R R + DA+ F + P+ K + ++ L Sbjct: 347 SYRELPIRIAELGLMHRYEMSGALSGLQRVRGMTLNDAHVF-VRPDQIKDEFKRVVELIL 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + R LS+ D T+ + D M + D Sbjct: 406 EVYKDFDITDYSFR---------LSYR-----DPKNTEKYFDDDAMWEKAQAMLKSAMDE 451 Query: 243 ISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + ++ E A Y DV ++ ++ + + +S ++ F ++ L T Sbjct: 452 MEMDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----T 500 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG+ H + G+ + R VA +IE KG +P +AP ++ +I + A Sbjct: 501 YIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY---KG-AFPTWLAPVQMEIIPVNADAH 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + D + + +L + G DD E++G + A P +++G + V V ++ Sbjct: 557 L--DYAKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVR 614 Query: 420 HRLTGIREDMSLEEVI 435 + E M L+ I Sbjct: 615 RYGSKDSETMDLDAFI 630 >gi|229131392|ref|ZP_04260291.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196] gi|228652083|gb|EEL08021.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196] Length = 476 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 162/406 (39%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ +G + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKESGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + L I + Sbjct: 153 LRTTEFLWQEGHTIHETAEESQ-------IETLNILNLYA-------------------- 185 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC ++++ P I + T+ + A Y S +H+ Sbjct: 186 -----------AFC-EEYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + + ++ R+ KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATELQGRIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|229056233|ref|ZP_04195655.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH603] gi|229165394|ref|ZP_04293179.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH621] gi|228618078|gb|EEK75118.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH621] gi|228721106|gb|EEL72643.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH603] Length = 476 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/406 (19%), Positives = 162/406 (39%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ +G + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKESGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + L I + Sbjct: 153 LRTTEFLWQEGHTIHETAEESQ-------IETLNILNLYA-------------------- 185 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC ++++ P I + T+ + A Y S +H+ Sbjct: 186 -----------AFC-EEYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + + ++ R+ KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPLQVVIVPIAQHKEGVLEKATELQGRIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E ++++++ Sbjct: 331 GWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMDQL 376 >gi|194246926|emb|CAQ76827.1| prolyl-tRNA synthetase [Campylobacter concisus] Length = 105 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 48/70 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK++ P +E P+DA + SH+ ++R G + Q G+Y++LPLG+ D ++ +++EE Sbjct: 1 MKFSKFYAPTTKEAPKDASLPSHQFLIRGGFVEQIGSGLYNYLPLGKIMHDKISRVVKEE 60 Query: 61 QNRTGAIEMS 70 + GA+E+S Sbjct: 61 MDEAGALEVS 70 >gi|329768866|ref|ZP_08260294.1| threonyl-tRNA synthetase [Gemella sanguinis M325] gi|328837229|gb|EGF86866.1| threonyl-tRNA synthetase [Gemella sanguinis M325] Length = 647 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 90/387 (23%), Positives = 164/387 (42%), Gaps = 38/387 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + S DL++ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRRTIERYIVDKEVELGYDHVYTPIMGSKDLYITSGHWDHYQEDMFPPM 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + + M+ P + ++++ SYR LP ++ + R E G+ R R Sbjct: 322 EMDHETMVLRPMNCPHHMMVYKNERHSYRELPIRIAELGMMHRYEASGAVSGLQRVRGMT 381 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + K+ V ++ + LG+K+ R LS+ D Sbjct: 382 LNDAHVF-VRPDQLKDEF-KLTVGLIQEAYKDLGIKNFSYR---------LSYR-----D 425 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M + D + L+ + E A Y DV E Sbjct: 426 PENTEKYFDDDNMWNNAQQMLKETADELGLDYVEAEGEAAFYGPKLDVQVETAI-----G 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 K+ + I++ F ++ L + G DGK H + GI + R+VA ++E Sbjct: 481 KQETLSTIQLD--FLLPERFEL----EYIGEDGKAHRPVVIHRGIVSTMERMVAFLLEEY 534 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG + P +AP ++ +I + ++ D ++I L K G V DD E++G + Sbjct: 535 ---KGDL-PTWLAPNQVRIIPV--NNDYHYDYSKEIMQELKKAGVKVTIDDRDEKLGYKI 588 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIK 419 A P +++G K V + V ++ Sbjct: 589 REAANKKIPYTLVIGDKEVENKAVNVR 615 >gi|328912917|gb|AEB64513.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens LL3] Length = 653 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 92/406 (22%), Positives = 164/406 (40%), Gaps = 36/406 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S DL+ SG ++ Y M Sbjct: 274 QGLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTPVLGSKDLYETSGHWEHYQDGMFPP 333 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I++ I SYR LP ++ R E+ G+ R R Sbjct: 334 MEMDNETLVLRPMNCPHHMMIYKQDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 393 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + + ++ GL R LS+ D Sbjct: 394 TLNDAHIF-VRPDQIKEEFIRTVRLIQDVYEDFGLSDYTFR---------LSYR-----D 438 Query: 216 TGETQVFCSKDFMDFPIPSE-NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M S D+I E A Y DV ++ ++ + Sbjct: 439 PEDTEKYFDDDDMWNKAQSMLKAAMDEIGHDYYEAEGEAAFYGPKLDV---QVKTAIGKE 495 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 496 ETLSTVQLD----FLLPERFDL----TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIE-E 546 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 H G W +AP + +I + V D +K+ RL + G V D E+IG + Sbjct: 547 HKGALPTW---LAPVQFQVIPVSP--SVHLDYAKKVQERLQREGLRVELDSRDEKIGYKI 601 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A + P ++VG + + V ++ E +SL++ + A Sbjct: 602 REAQMQKIPYMLVVGDQEAENGAVNVRKYGEQKSETVSLDDFVKKA 647 >gi|282881336|ref|ZP_06290016.1| proline--tRNA ligase [Prevotella timonensis CRIS 5C-B1] gi|281304812|gb|EFA96892.1| proline--tRNA ligase [Prevotella timonensis CRIS 5C-B1] Length = 493 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 98/197 (49%), Gaps = 10/197 (5%) Query: 250 EQWTA-PYAATSDVHNEKLFDSLP----ENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 EQW A P E+ +L E + ++ G + G ++ T+ Sbjct: 202 EQWMAVPVVQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAKSFDVTYLN 261 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQV--C 361 + K YV S+G+ + R++ A+I + D G++ P +AP ++ ++ I K +Q+ Sbjct: 262 KENKPEYVWATSWGV-STRLIGALIMTHSDDNGLVLPPRLAPIQVVIVPISKTSEQLKAI 320 Query: 362 RDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D + I L +G V +DD ++ G +FA +L G P+++++G + + ++ +E+ Sbjct: 321 HDQLKPIIDGLRAMGITVKFDDNDTKRPGFKFADYELKGVPVRLVMGGRDLENNTIEVMR 380 Query: 421 RLTGIREDMSLEEVINY 437 R T +E +SLE+++ Y Sbjct: 381 RDTLQKETVSLEKILEY 397 Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ IKS+R+LP Q R E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIKSWRDLPLMCNQWCNVMRWEMRTR-PFLRTSEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSY 181 ++ ++ T E ++ KM Y Sbjct: 173 WQEGHTAHATREEAEAEAQKMLKVY 197 >gi|255532798|ref|YP_003093170.1| prolyl-tRNA synthetase [Pedobacter heparinus DSM 2366] gi|255345782|gb|ACU05108.1| prolyl-tRNA synthetase [Pedobacter heparinus DSM 2366] Length = 490 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 10/183 (5%) Query: 250 EQWTA-PYAATSDVHNEKLFDSLP----ENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 EQW A P NE+ +L E + ++ G + G ++ F Sbjct: 198 EQWMAVPVVKGVKTPNERFAGALDTYCIEALMQDGKALQAGTSHFLGQNFAKAFDVKFTN 257 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 +GK +V S+G+ + R++ A+I + D G++ P +AP ++ ++ I H++ ++ Sbjct: 258 KEGKIEHVWASSWGV-STRLMGALIMAHSDDAGLVLPPKLAPIQVVIVPIYKHEEELKNI 316 Query: 365 ---CEKIYARLSKVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +++ A+L ++G V +DD Q G +FA +L G P+++ +G + + + VE+ Sbjct: 317 TGFVDELIAKLKRMGISVKYDDRDTQRPGFKFAEYELKGVPVRLAIGGRDMENGTVELAR 376 Query: 421 RLT 423 R T Sbjct: 377 RDT 379 Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 1/97 (1%) Query: 85 RYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 + D G ++ + ++ +I PT E ++ + ++ I+SYR+LP Q R E+R Sbjct: 98 KNDGNGNIIVDETAKLEEELIVRPTSETIIWNTYKGWIQSYRDLPILVNQWANVVRWEMR 157 Query: 145 PRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 R +R+ EFL ++ ++ T + + KM Y Sbjct: 158 TRL-FLRTTEFLWQEGHTAHATADEAVEETRKMLDVY 193 >gi|254481727|ref|ZP_05094970.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] gi|214037856|gb|EEB78520.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] Length = 640 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 90/420 (21%), Positives = 152/420 (36%), Gaps = 74/420 (17%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W P G + +RE Q + E+ P L LW +SG D +G + Sbjct: 256 QEEAPGMVFWHPAGWSIYQTIEQYMREGQQQHDYQEIKTPQLVDLSLWKKSGHADKFGDD 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M L D+ P + +F +KSYR+LP + R+E G+MR Sbjct: 316 MFMLK-AEDREFAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGIMR 374 Query: 152 SREFLMKDAYSF----DLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGGDL 206 R F+ DA+ F + PE S F+ +L ++ G + R + P Sbjct: 375 VRGFVQDDAHIFCTEEQIQPEVSS------FIDFLHSVYEDFGFADVIYRLSTRP----- 423 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E +V +D W A +D N + Sbjct: 424 -----------EQRVGSDQD-------------------------WDRAEKALADALNAQ 447 Query: 267 --LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGADGKDHYVQ 313 +++LP IE +G ++ GT +S+P + A + DG Sbjct: 448 DLPWETLPGEGAFYGPKIEFSLKDCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGSRQVPV 507 Query: 314 MGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 M I G+ ++ ++G I+P +AP + ++NI + + + L Sbjct: 508 MLHRAILGSFERFIGILIEHYEG---IFPTWLAPTQAVVLNITDKQS---EYAKSVEDSL 561 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G V D E+IG + + P ++VG K V + ++ R M LE Sbjct: 562 KNKGFRVISDLRNEKIGFKIREHTIQKVPYLLVVGDKEVESQTLAVRARRGEDLGSMDLE 621 >gi|145534943|ref|XP_001453210.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420921|emb|CAK85813.1| unnamed protein product [Paramecium tetraurelia] Length = 609 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 90/410 (21%), Positives = 169/410 (41%), Gaps = 70/410 (17%) Query: 42 WLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND 101 +LP G K + + +IR+E G E+ P L DLW +SG D Y + + +D Sbjct: 248 FLPHGTKIYNKLVEMIRKEYRERGYQEVITPQLFHKDLWKQSGHLDKYAENIYMT---HD 304 Query: 102 KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDA 160 M P + ++++ SY+ LP F + R+E+ G+ R R+F DA Sbjct: 305 HQMGLKPMNCPGHCLLYKTLQHSYKELPIRFADFGVLHRNEVHGTLTGLTRVRKFTQDDA 364 Query: 161 YSFDLTPEGSKHSYNKM-FVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGE 218 + F + + N + F+S +++ R G + + GDL + D E Sbjct: 365 HIFCTIEQIQQEIKNTLDFLS--KVYGRFGFTWELTLSTRPDKYIGDLQ-----IWDEAE 417 Query: 219 TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDV----HNEK-------- 266 Q+ + D P D A Y DV HN+K Sbjct: 418 RQLRIA--LSDTPYTENPGD--------------GAFYGPKIDVLIRDHNQKQHQCGTIQ 461 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 L +LPE ++ + K+S P V + +G++ + Sbjct: 462 LDFNLPERFDLTYH--------HENDKFSRP--------------VMIHRAILGSIERMM 499 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++ ++G+ WP ++P ++ +I + +V + ++IY +L K+G +V +D + Sbjct: 500 AILTEQYNGR---WPFWLSPRQVLIIPV---SEVSKQYAKEIYDQLYKLGFEVELEDSEQ 553 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR-EDMSLEEVI 435 +G + ++L F + +G+K + V+++ R + + M L+E I Sbjct: 554 TLGKRIRKGEMLHFNYILTLGAKEQESNTVDVRERGDNHKHQSMKLDEFI 603 >gi|256822932|ref|YP_003146895.1| threonyl-tRNA synthetase [Kangiella koreensis DSM 16069] gi|256796471|gb|ACV27127.1| threonyl-tRNA synthetase [Kangiella koreensis DSM 16069] Length = 639 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 87/395 (22%), Positives = 153/395 (38%), Gaps = 44/395 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G+ W G + IRE E+ P + LW +SG +D +G Sbjct: 255 IQEEAPGMIFWHDKGWTIYKTLEQYIRERLKEHDYQEVKTPQMVDRSLWEKSGHWDKFGD 314 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +M L +D D A+ P + IF +KSYR+LP + R+E G+ Sbjct: 315 DMFTLKSDERDYAI--KPMNCPCHVQIFNVGLKSYRDLPLRMAEFGSCHRNEPSGALHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F+ DA+ F T + + +K ++ G + ++ + P Sbjct: 373 MRLRNFVQDDAHIF-CTEDQIQEEVSKFIAMLYDVYADFGFTDVIVKLSTRP-------- 423 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 E +V +++ D + NSI ++ A + KL Sbjct: 424 --------EQRVGTDQEW-----DKAEAALADALKANSIQFEYQPGEGA---FYGPKLEF 467 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVA 326 +L K R + G I +S+P + A + G ++ V + +G++ Sbjct: 468 TL---KDCLERHWQCGTI---QVDFSMPGRLDAEYVAESGERETPVMLHRAILGSLERFI 521 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ GK W +AP + ++NI D C+K+ L G V D E Sbjct: 522 GILIEEFAGKFPAW---LAPTQAVVMNITDKQA---DFCQKVVESLKNKGFRVNSDLRNE 575 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +IG + L P ++VG + V ++ V ++ R Sbjct: 576 KIGFKIREQTLARVPFLLVVGDREVENNHVAVRTR 610 >gi|294501489|ref|YP_003565189.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294351426|gb|ADE71755.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551] Length = 645 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 87/387 (22%), Positives = 163/387 (42%), Gaps = 36/387 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S +L+ SG ++ Y +M Sbjct: 266 QGLPLWLPKGATIRRIIERYIVDKEVSLGYQHVYTPVLGSVELYKTSGHWEHYQDDMFPA 325 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + +++ I SYR LP ++ R E+ G+ R R Sbjct: 326 MEMDNEDLVLRPMNCPHHMMVYKQGIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 385 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ ++ G ++ R LS+ D Sbjct: 386 TLNDAHIF-VRPDQIKEEFIRVVRLVEAVYKDFGFENYSFR---------LSYR-----D 430 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M S D D + L+ E A Y DV ++ +L + Sbjct: 431 PADTEKYFDDDAMWEKAQSMLKDAMDELDLDYYEAEGEAAFYGPKLDV---QVKTALGKE 487 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 488 ETLSTVQLD----FLLPERFDL----TYIGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY 539 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ +I + V + +++ +L G V D E+IG + Sbjct: 540 ---KG-AFPTWLAPVQVQVIPVSP--TVHLEYAKEVQEQLQLAGIRVELDSRDEKIGYKI 593 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIK 419 A + P ++VG K V D V ++ Sbjct: 594 REAQMQKIPYMLVVGDKEVEDKAVNVR 620 >gi|161507864|ref|YP_001577828.1| theronyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] gi|172048343|sp|A8YWE1|SYT_LACH4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160348853|gb|ABX27527.1| Theronyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] Length = 644 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 92/405 (22%), Positives = 163/405 (40%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I + + G + P L + D + SG + Y +M Sbjct: 260 GLPYWMPKGATIRRAVERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + IF+ HI+SYR+LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALDQVQTEFAKILKLIMEVYKDFDITDYYFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M D + L+ + E A Y D+ + +L + Sbjct: 425 PKNTDKYFANDEMWEKSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPDRFGL----TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N +AH + EK+ A L+K G V DD E++G + Sbjct: 534 KGAFPTW---LAPVQAEIIPVNNEAHGEY----AEKVRAELAKRGFRVEVDDRNEKMGYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G + + KV ++ T SL++ IN Sbjct: 587 IRESQTQKVPYTLVLGDEEMKSGKVNLRRYGTDEEISKSLDDFIN 631 >gi|308174589|ref|YP_003921294.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|307607453|emb|CBI43824.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|328554512|gb|AEB25004.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens TA208] Length = 643 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 92/406 (22%), Positives = 164/406 (40%), Gaps = 36/406 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S DL+ SG ++ Y M Sbjct: 264 QGLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTPVLGSKDLYETSGHWEHYQDGMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I++ I SYR LP ++ R E+ G+ R R Sbjct: 324 MEMDNETLVLRPMNCPHHMMIYKQDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + + ++ GL R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKEEFIRTVRLIQDVYEDFGLSDYTFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSE-NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M S D+I E A Y DV ++ ++ + Sbjct: 429 PEDTEKYFDDDDMWNKAQSMLKAAMDEIGHDYYEAEGEAAFYGPKLDV---QVKTAIGKE 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPERFDL----TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIE-E 536 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 H G W +AP + +I + V D +K+ RL + G V D E+IG + Sbjct: 537 HKGALPTW---LAPVQFQVIPVSP--SVHLDYAKKVQERLQREGLRVELDSRDEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A + P ++VG + + V ++ E +SL++ + A Sbjct: 592 REAQMQKIPYMLVVGDQEAENGAVNVRKYGEQKSETVSLDDFVKKA 637 >gi|325569916|ref|ZP_08145910.1| threonine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325157039|gb|EGC69207.1| threonine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 646 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 88/416 (21%), Positives = 170/416 (40%), Gaps = 48/416 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + + DL+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMANVDLYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + D ++F + P+ K + + + ++ + R + P D + + Sbjct: 382 TLNDGHTF-VRPDQIKEEFKRTLDLMVGVYEDFNITDYRFRLSYRDPQNKDKYFDDDAMW 440 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + +T + + D ++ + + A Y DV ++ +L Sbjct: 441 ENAQTMLKAAMDELELDYFEADGE--------------AAFYGPKLDV---QVKTALGME 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++++ V + + M A + Sbjct: 484 ETLSTIQLD----FLLPERFDL----TYVGEDGENNHRPVVIHRGIVSTMERFVAYLTEV 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + S+I +++AH D +I RL G V DD E++G Sbjct: 536 YKGAFPTW---LAPIQASIIPVSVEAHS----DYAYEIKERLQAQGLRVEVDDRNEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIRE-----DMSLEEVINYA 438 + + P Q++VG + V+D+ V I+ + T + E D EV NY+ Sbjct: 589 KIRASQTQKIPYQIVVGDQEVNDATVNIRRYGSKETQVEELNLFVDAMAAEVKNYS 644 >gi|116872988|ref|YP_849769.1| threonyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458497|sp|A0AJ08|SYT_LISW6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116741866|emb|CAK20990.1| threonyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 640 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 94/436 (21%), Positives = 183/436 (41%), Gaps = 38/436 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K F+ + +E RD +L L T I + +G+ WLP G + I +++ R Sbjct: 228 KEFIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEER 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I Sbjct: 287 LGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ + R E+ G+ R R + DA+ F + P+ K + ++ L Sbjct: 347 SYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVF-VRPDQIKDEFKRVVELIL 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ +K R LS+ D T+ + D M + D Sbjct: 406 EVYKDFDIKDYSFR---------LSYR-----DPKNTEKYFDDDAMWEKAQAMLKSAMDE 451 Query: 243 ISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + ++ E A Y DV ++ ++ + + +S ++ F ++ L T Sbjct: 452 MGMDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----T 500 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG+ H + G+ + R VA +IE KG +P +AP ++ LI + A Sbjct: 501 YIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY---KG-AFPTWLAPVQMELIPVNADAH 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + D + + +L + G DD E++G + A P +++G + + V ++ Sbjct: 557 L--DYSKGVQDKLQRAGLRSEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMEAGSVNVR 614 Query: 420 HRLTGIREDMSLEEVI 435 + E M L+ I Sbjct: 615 RYGSKDSETMDLDAFI 630 >gi|159903594|ref|YP_001550938.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] gi|238687108|sp|A9BAX2|SYT_PROM4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|159888770|gb|ABX08984.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] Length = 638 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 91/419 (21%), Positives = 151/419 (36%), Gaps = 66/419 (15%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W P G + IR+ N E+ P LW +SG +D + + Sbjct: 256 QEEAPGMVFWHPNGWSIYQVLEKYIRDVLNNNYYQEVKTPQAVDRSLWEKSGHWDKFKDD 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N + I P + IF +KSYR+LP + R+E G+MR Sbjct: 316 MFTTTSENREYAI-KPMNCPCHIQIFNQGLKSYRDLPIRLAEFGSCHRNEPSGALHGLMR 374 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R F+ DA+ F E S F+ + ++ G I ++ + P + EF Sbjct: 375 VRNFVQDDAHIF--CTEAQVQSEVSNFIDLVFEVYKSFGFNEIIIKLSTRP-KKRVGSEF 431 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD- 269 I W A S+ N K D Sbjct: 432 I----------------------------------------WDKSEKALSEALNSKGLDW 451 Query: 270 -SLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGS 316 LP IE + ++ GT +S+P + A + G K V + Sbjct: 452 SYLPGEGAFYGPKIEFSLKDCLNRVWQCGTIQVDFSMPSRLEAKYIDEKGEKKEPVMLHR 511 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 +G+ ++ ++ G +W +AP +I ++ I + C CE + +L G Sbjct: 512 AILGSFERFIGILIENYAGNFPVW---LAPVQIIVMGITDRNSSC---CESLTTKLINKG 565 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 V D E+IG + L P +I+G K + K+ ++ R +SLEE + Sbjct: 566 YRVKLDLRNEKIGFKIREHTLNRIPYLLIIGDKEEKEGKIAVRTREGNDMGSISLEEFL 624 >gi|332523222|ref|ZP_08399474.1| threonine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] gi|332314486|gb|EGJ27471.1| threonine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] Length = 648 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 82/387 (21%), Positives = 156/387 (40%), Gaps = 35/387 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ +G + P + S D + SG +D Y +M Sbjct: 261 QGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPMASVDFYKTSGHWDHYRDDMFPT 320 Query: 97 ADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D D + + P + ++++ H+ SYR LP ++ + R E G+ R RE Sbjct: 321 MDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 380 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + D + F +TPE + + + + ++ L R LS+ Sbjct: 381 MTLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR---------LSYR----- 425 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPE 273 D +T+ + D M S D + ++ E A Y D+ ++ +L Sbjct: 426 DPNDTEKYFDNDEMWEKAQSMLKAALDEMGVDYFEAEGEAAFYGPKLDI---QVKTALGN 482 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESS 332 + +S ++ F ++ L + GADG++H M G I M A++ + Sbjct: 483 EETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMIHRGVISTMERFTAILIET 534 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 + G W +AP ++++I I V D ++ L G D+ E++ + Sbjct: 535 YKGAFPTW---LAPHQVTVIPISNEAHV--DYAWEVAKILRDKGVRADVDERNEKMQYKI 589 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIK 419 + P Q+IVG K + + V ++ Sbjct: 590 RASQTSKIPYQLIVGDKEMEEKSVNVR 616 >gi|154492734|ref|ZP_02032360.1| hypothetical protein PARMER_02371 [Parabacteroides merdae ATCC 43184] gi|154087039|gb|EDN86084.1| hypothetical protein PARMER_02371 [Parabacteroides merdae ATCC 43184] Length = 493 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 73/348 (20%), Positives = 147/348 (42%), Gaps = 65/348 (18%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +R+ I+SYR+LP Q R E MR+R Sbjct: 114 AAKLEEELIIRPTSETIIWNTYRNWIQSYRDLPILCNQWANVMRWE-------MRTR--- 163 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 +F+ + G + R E+ + V AD Sbjct: 164 --------------------LFLRTAEFLWQEGHTAHATREEAEIEAKKMQG---VYADF 200 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 E ++M P+ I + S E+ +A D + +++ ++ Sbjct: 201 AE-------NYMAMPV---------IKGVKSASER----FAGALDTYT---IEAMMQD-- 235 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + ++ G + G + TF +GK Y S+G+ + R++ A+I S D Sbjct: 236 --GKALQAGTSHFLGQNFGKAFDVTFIDKNGKSDYAWATSWGV-STRLIGALIMSHSDDN 292 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQF 392 G++ P +AP ++ +I I ++ EK I A+L +G V +D+ ++ G +F Sbjct: 293 GLVLPPHLAPIQVVIIPIYRSEEQLAQISEKVNGIVAKLKALGISVKFDNADNKKPGWKF 352 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 A +L G P+++ +G + + ++ +E+ R T +E ++ + + Y + Sbjct: 353 AEYELKGVPVRLAMGGRDLENNTIEVMRRDTLEKETVTCDNIETYVQN 400 >gi|291548182|emb|CBL21290.1| prolyl-tRNA synthetase, family I [Ruminococcus sp. SR1/5] Length = 479 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 83/407 (20%), Positives = 150/407 (36%), Gaps = 70/407 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG + P G +N+ + TG + +P L E + + E+ Sbjct: 38 KGCMAIKPAGYAIWENIQHELDRRFKETGVENVYMPIFIPESLLDKEKDHVEGFAPEVAW 97 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D + + PT E + D ++ I+S+R+LP + Q +++ RP Sbjct: 98 VTHGGLDPLQERLCVRPTSETLFCDFYQKEIQSHRDLPKVYNQWCSVVRWEKTTRP---F 154 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +RSREFL ++ ++ T E ++ +M Y Sbjct: 155 LRSREFLWQEGHTAHATAEEAEQRTIQMLNIY---------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 AD FC + I + TD + A Y S +H+ K Sbjct: 187 ----AD------FCEEVLAIPVIKGQKTDKEKFAGAE-------ATYTIESLMHDGKALQ 229 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 S G FG ++ + D YV S+G+ R++ A+I Sbjct: 230 S--------------GTSHNFGDGFAKAFGIQYTDKDNTLKYVHQTSWGM-TTRMIGAII 274 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 D G++ P +AP + +I I+ + + +++ A L G D + G Sbjct: 275 MVHGDNSGLVLPPRIAPVQTVIIPIQQRKEGVMEKADELLAALKAAGIRAKVDATDKSPG 334 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +FA ++ G PL+V G K + + + + R T + +S EE+ + Sbjct: 335 FKFAEQEMRGIPLRVECGPKDIENGQAVLCRRDTREKYTVSFEELAD 381 >gi|225868159|ref|YP_002744107.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] gi|259516675|sp|C0MCN7|SYT_STRS7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225701435|emb|CAW98547.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] Length = 648 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 86/399 (21%), Positives = 162/399 (40%), Gaps = 46/399 (11%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P L S +L+ SG ++ Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWEHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + ++++H+ SYR LP ++ + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELPIRIAELGMMHRYEKSGALS 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F + PE + + + + ++ L R LS Sbjct: 374 GLQRVREMTLNDGHLF-VMPEQIQEEFQRALQLIIDVYEDFNLTDYRFR---------LS 423 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + D +T + D M EN +L+ + E A Y D Sbjct: 424 YR-----DPKDTHKYYDNDEM-----WENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + +S ++ F +++L ++ GADG++H M G I Sbjct: 474 I---QVKTALGNEETLSTIQLD----FLLPERFNL----SYIGADGEEHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP ++++I I + D ++ L G Sbjct: 523 TMERFTAILIETYKGAFPTW---LAPRQVTVIPISNEAHI--DYAWEVAKTLRDHGIRAD 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 DD E++ + + P Q+IVG K + D V ++ Sbjct: 578 VDDRNEKMQYKIRASQTSKIPYQLIVGDKEMQDKSVNVR 616 >gi|24379968|ref|NP_721923.1| threonyl-tRNA synthetase [Streptococcus mutans UA159] gi|73919830|sp|Q8DT12|SYT_STRMU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|24377953|gb|AAN59229.1|AE014990_3 putative threonyl-tRNA synthetase [Streptococcus mutans UA159] Length = 649 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 86/395 (21%), Positives = 163/395 (41%), Gaps = 38/395 (9%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P + S DL+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPDGATIRRIIERYITDKEVASGYQHVYTPPIASVDLYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D ++ + P + +++++H+ SYR LP ++ + R E Sbjct: 314 REDMFPTMDMGDGESFVLRPMNCPHHIEVYKNHVHSYRELPIRIAELGMMHRYEKSGALS 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D ++F + + + + + + ++ L R Sbjct: 374 GLQRVREMTLNDGHTF-VALDQVEDEFKRTLQLIIDVYEDFNLTDYSFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + D +T + D M + DD+ E A Y D+ + Sbjct: 422 ---LSYRDPNDTHKYFDDDEMWEKSQTMLKAAMDDMGLDYYEAEGEAAFYGPKLDI---Q 475 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RV 324 + +L ++ +S ++ F ++ L T+ GADG++H M GI + R Sbjct: 476 VKTALGNDETLSTIQLD----FLLPERFEL----TYIGADGEEHRPVMIHRGIVSTMERF 527 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 A +IE+ KG +P +AP ++++I I + D ++ L G DD Sbjct: 528 TAYLIETY---KG-AFPTWLAPHQVTVIPISNEAHI--DYAWEVAKELRDHGIRADVDDR 581 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E++ + + P Q+IVG K V + V ++ Sbjct: 582 NEKMQYKIRQSQTKKVPYQLIVGDKEVENGTVNVR 616 >gi|332686097|ref|YP_004455871.1| threonyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] gi|332370106|dbj|BAK21062.1| threonyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] Length = 647 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 93/423 (21%), Positives = 175/423 (41%), Gaps = 43/423 (10%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q G+ WLP G + I +++ G + P + + DL+ SG + Y Sbjct: 255 MISQEVGSGLPFWLPKGATIRRTIERYITDKEISLGYQHVYTPIMANVDLYKTSGHWAHY 314 Query: 90 GKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D M + P + +++ + SYR LP ++ + R E Sbjct: 315 HEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKDTVHSYRELPIRIAELGMMHRYEKSGALS 374 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDL 206 G+ R RE + D ++F + P+ K + ++ L ++ + R + P D Sbjct: 375 GLQRVREMTLNDGHTF-VRPDQIKEEFKRILELMLAVYKDFNITDYKFRLSYRDPNNKDK 433 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + + +T + + D + D+ + E A Y DV + Sbjct: 434 YFDDDAMWTKAQTMLKGAMDELKL-------DYFE-------AEGEAAFYGPKLDV---Q 476 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAM-R 323 + +L + +S ++ F ++ L T+ G DG++++ V + + M R Sbjct: 477 VKTALGMEETLSTIQLD----FLLPERFDL----TYIGEDGENNHRPVVIHRGIVSTMER 528 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFW 381 V+ +IE + G +W +AP + ++I ++ AH + E++ R G + Sbjct: 529 FVSYLIE-VYKGAFPLW---LAPIQATIIPVSVDAHSDYAYETKERLQMR----GLRIEV 580 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 DD E++G + + P Q++VG K V DS V I+H + E M+L I+ Sbjct: 581 DDRNEKMGYKIRASQTQKIPYQIVVGDKEVDDSTVTIRHYGSKETEVMALNLFIDSLIAE 640 Query: 442 FSN 444 SN Sbjct: 641 ISN 643 >gi|297544949|ref|YP_003677251.1| threonyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842724|gb|ADH61240.1| threonyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 634 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 96/413 (23%), Positives = 160/413 (38%), Gaps = 51/413 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH G + P G + + R+E + G E+ P + + +LW SG +D Y K Sbjct: 254 IHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEELWRRSGHWDHY-K 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + +++S + SYR+LP ++ L R EL G+M Sbjct: 313 ENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVHRHELSGVLHGLM 372 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKM--FVSYL-RIFHRLGLKSIPMRAESGPIGGDLS 207 R R F DA+ F +TPE + + V Y +IF + R E+ +G D Sbjct: 373 RVRSFTQDDAHLF-MTPEQVEDEILGVINLVDYFYKIFGFEYFVELSTRPENS-MGSDED 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A + + + ++ P D A Y D H L Sbjct: 431 WELATNA------LISALNRVNLPYKVNEGD--------------GAFYGPKIDFH---L 467 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMR 323 DS+ R + G I F ++ L + G DG+ H + + G++ Sbjct: 468 KDSI-------GRTWQCGTIQLDFQMPERFEL----EYIGPDGEKHRPIMLHRVIYGSIE 516 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +P +AP ++ ++ I + +Y RL + DD Sbjct: 517 RFIGILTEHFAGA---FPTWLAPVQVRVLPISDKHYAY---AQNVYGRLLENDIRAELDD 570 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E++G + A L P +IVG K V V ++ R G +SL E I Sbjct: 571 RNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRREGDLGAISLSEFIE 623 >gi|58584729|ref|YP_198302.1| threonyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|73919844|sp|Q5GSG4|SYT_WOLTR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|58419045|gb|AAW71060.1| Threonyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 632 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 4/172 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G W G + + + IR++ G E+ P L S +LW +SG +D + + Sbjct: 253 IQEEAVGQVFWHEQGYTLYNVLESYIRKKLINNGYAEVKTPILVSKELWEKSGHWDKFRE 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + K + P + IF S+ +SYRNLP + + R+E G+M Sbjct: 313 NMFIVDESESKKLAIKPMNCPCHVQIFNSYTRSYRNLPIRMAEFGMCHRNESSGSLHGLM 372 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP 201 R R F DA+ F + E +S F + L+ ++ LG I ++ P Sbjct: 373 RVRGFTQDDAHIFCM--EEQVNSETVKFCALLKEVYSELGFNEISVKFSDRP 422 >gi|326391979|ref|ZP_08213481.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325991980|gb|EGD50470.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 634 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 97/412 (23%), Positives = 160/412 (38%), Gaps = 51/412 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH G + P G + + R+E + G E+ P + + +LW SG +D Y K Sbjct: 254 IHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEELWRRSGHWDHY-K 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + +++S + SYR+LP ++ L R EL G+M Sbjct: 313 ENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVHRHELSGVLHGLM 372 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKM--FVSYL-RIFHRLGLKSIPMRAESGPIGGDLS 207 R R F DA+ F +TPE + + V Y +IF + R E+ +G D Sbjct: 373 RVRSFTQDDAHLF-MTPEQVEDEILGVINLVDYFYKIFGFEYFVELSTRPENS-MGSDED 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A + + + ++ P D A Y D H L Sbjct: 431 WELATNA------LISALNRVNLPYKVNEGD--------------GAFYGPKIDFH---L 467 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMR 323 DS+ R + G I F ++ L + G DG+ H + + G++ Sbjct: 468 KDSI-------GRTWQCGTIQLDFQMPERFEL----EYIGPDGEKHRPIMLHRVIYGSIE 516 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +P +AP ++ ++ I + +Y RL + DD Sbjct: 517 RFIGILTEHFAGA---FPTWLAPVQVRVLPISDKHYAY---AQNVYGRLLENDIRAELDD 570 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + A L P +IVG K V V ++ R G +SL E I Sbjct: 571 RNEKIGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKEGDLGAISLNEFI 622 >gi|21674311|ref|NP_662376.1| prolyl-tRNA synthetase [Chlorobium tepidum TLS] gi|81860050|sp|Q8KCD1|SYP_CHLTE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|21647484|gb|AAM72718.1| prolyl-tRNA synthetase [Chlorobium tepidum TLS] Length = 481 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/340 (20%), Positives = 134/340 (39%), Gaps = 63/340 (18%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ I+SYR+LP Q R E+R R +R+ EFL ++ ++ TP Sbjct: 108 PTSETIIWSSYKKWIQSYRDLPILINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHATP 166 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E ++ +M + I+ + + M +++ E++ F D Sbjct: 167 EEAQEEVIRM----INIYRTFAEEYMAMP--------------VIVGKKSESEKFAGAD- 207 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 A Y + + + + ++ G Sbjct: 208 --------------------------ATYCIEAMMQD--------------GKALQAGTS 227 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 G ++ F+ DG YV S+G+ + R++ A+I + D KG++ P +A Sbjct: 228 HNLGQNFAKAFDCQFQTKDGVLDYVWATSWGV-STRLIGALIMAHSDDKGLVLPPKLASR 286 Query: 348 KISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVI 405 ++ +I I K + R I L++ G F DD G +FA +L G P+++ Sbjct: 287 QVVIIPILKGNKDEVRARARFIAKTLNRHGIPTFVDDSENNSPGWKFAEYELQGIPVRIE 346 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 +G + + K + R T + ++ L++ + NN Sbjct: 347 LGPRDLEQGKCIVARRDTFEKTELLLDDELTINIEEILNN 386 >gi|325279815|ref|YP_004252357.1| Prolyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] gi|324311624|gb|ADY32177.1| Prolyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] Length = 491 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 83/163 (50%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F A+GK YV S+G+ + R++ A+I + D G+ Sbjct: 233 GKALQAGTSHFLGQNFAKAFDVQFTNAEGKLEYVWATSWGV-STRLMGALIMAHSDDNGL 291 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV---GCDVFWDDMGEQI-GSQFAV 394 + P +AP ++ ++ I + + +K+ + K+ G V +DD Q G +FA Sbjct: 292 VLPPKLAPLQVVIVPIYKGAEGLKKISDKVQGLIEKLRAKGISVKYDDRDTQKPGWKFAD 351 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++ +G + + + +E+ R T +E + LE ++ + Sbjct: 352 YELKGVPVRLAMGERDLENGTIEVARRDTLTKETLPLEGIVGH 394 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ I PT E ++ + +++ I+SYR+LP Q R E+R R +R+ EFL Sbjct: 111 AAKLEEEYIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVMRWEMRTRM-FLRTAEFL 169 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSY 181 ++ ++ T E + NKM Y Sbjct: 170 WQEGHTAHATKEEALEEANKMVRVY 194 >gi|78044971|ref|YP_360408.1| threonyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] gi|123770579|sp|Q3ABS6|SYT_CARHZ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77997086|gb|ABB15985.1| threonyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] Length = 634 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 89/398 (22%), Positives = 151/398 (37%), Gaps = 45/398 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G + P G + + RE+ G E+ P + + +LW SG + Y K Sbjct: 255 LQEEGPGFPFFHPKGMVIRNELENFWREKHRLAGYQEIKTPIILNRELWERSGHWAHY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D+ P + ++++ + SYR P ++ L R EL G+M Sbjct: 314 ENMYFTKIDDQDYAIKPMNCPGSILVYKNKLHSYREFPIRLAELGLVHRHELSGVLHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F + PE K + ++ + F+RL E+ Sbjct: 374 RVRCFTQDDAHIF-MLPEQVKDEIIGV-INLIDEFYRL-----------------FGFEY 414 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 V T S + + S ++ I E A Y D H L D Sbjct: 415 HVELSTRPENSMGSDELWELATNSLKEALEERGLPYKINEGDGAFYGPKIDFH---LKDC 471 Query: 271 LPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVA 326 L R + G I F K+ L T+ G DG+ H V + G++ Sbjct: 472 L-------GRTWQCGTIQLDFQMPEKFDL----TYIGEDGQKHRPVMIHRVVFGSIERFI 520 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ + G +W ++P ++ +I + R+ ++IY +L G V DD E Sbjct: 521 GILIEHYAGAFPVW---LSPVQVRVITVAERH---REYGQEIYQKLFNQGVRVELDDRNE 574 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 IG + + P +IVG K + V ++ R G Sbjct: 575 TIGYKIREGQMQKIPYLLIVGDKEIEQGSVAVRKRGVG 612 >gi|328464763|gb|EGF36081.1| threonyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463] Length = 644 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 92/405 (22%), Positives = 163/405 (40%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I + + G + P L + D + SG + Y +M Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + IF+ HI+SYR+LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VVLDQVQTEFAKILKLIMEVYKDFDITDYYFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M D + L+ + E A Y D+ + +L + Sbjct: 425 PKNTDKYFANDEMWEKSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPDRFGL----TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N +AH + EK+ A L+K G V DD E++G + Sbjct: 534 KGAFPTW---LAPVQAEIIPVNNEAHGEY----AEKVRAELAKRGFRVEVDDRNEKMGYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G + + KV ++ T SL++ IN Sbjct: 587 IRESQTQKVPYTLVLGDEEMKSGKVNLRRYGTDEEISKSLDDFIN 631 >gi|193203271|ref|NP_001122525.1| Prolyl tRNA Synthetase family member (prs-2) [Caenorhabditis elegans] gi|148472914|emb|CAN86903.1| C. elegans protein T27F6.5d, confirmed by transcript evidence [Caenorhabditis elegans] Length = 138 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 52/83 (62%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +H +++ G I +KG YS LPLGQ+ +D + I+ E +GA+++++P + + LW Sbjct: 22 AHTMLVENGFILPTAKGFYSLLPLGQRVIDKLCRILDVEFQNSGALKIAMPIVGTQQLWE 81 Query: 82 ESGRYDSYGKEMLRLADRNDKAM 104 ++GR+++ G EM+R DR M Sbjct: 82 KTGRWEAMGPEMIRFHDRQQNHM 104 >gi|323339586|ref|ZP_08079860.1| threonine--tRNA ligase [Lactobacillus ruminis ATCC 25644] gi|323092981|gb|EFZ35579.1| threonine--tRNA ligase [Lactobacillus ruminis ATCC 25644] Length = 685 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 164/417 (39%), Gaps = 42/417 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + DL+ +SG +D Y ++M Sbjct: 300 GLPYWMPNGATIRRTIERYIIDKEVSWGYEHVYTPILANVDLYKQSGHWDHYREDMFPPM 359 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D ++ P + I+ HI+SYR+LP ++ + R E G+ R RE Sbjct: 360 DMGDGELLELRPMNCPSHIQIYNRHIRSYRDLPLRIAELGMMHRYEKSGALTGLSRVREM 419 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F +TP+ + + + + ++H + R LS+ D Sbjct: 420 TLNDGHTF-VTPDQIEAEFKRTLQLMVEVYHDFNINDYRFR---------LSYR-----D 464 Query: 216 TGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + DD+ E A Y DV + +L Sbjct: 465 PKNTHKYYDDDEMWEKSQRMLKAAMDDLGLEYFEAEGEAAFYGPKLDVQTKT---ALGGE 521 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L + GADG++H M GI M A + + Sbjct: 522 ETLSTIQLD----FLLPERFDL----KYVGADGEEHRPVMIHRGIVSTMERFTAYLTEMY 573 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N+ H R + AR +V DD E++G + Sbjct: 574 KGAFPTW---LAPKQVEVIPVNLDLHTDYARKLASALAARQIRVSV----DDRNEKMGYK 626 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE---VINYASHRFSNN 445 A + P ++VG V ++ E M+ ++ ++++ +S N Sbjct: 627 IRQAQVNKVPYTLVVGDNEKEQGTVTVRRYGQEKTETMAFDDFKKILDHDLETYSRN 683 >gi|320528406|ref|ZP_08029568.1| threonyl-tRNA synthetase [Solobacterium moorei F0204] gi|320131320|gb|EFW23888.1| threonyl-tRNA synthetase [Solobacterium moorei F0204] Length = 591 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 95/412 (23%), Positives = 163/412 (39%), Gaps = 56/412 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G ++ I ++ G + P++ S L+ SG Y +M + Sbjct: 203 GLPLWLPNGLTVRRLLSDYIMNKELARGYQHVLTPSVASTKLYKISGHLAHYKDDMFPIM 262 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 R+D + P + I++S + SYR+LP +I FR E G+ RSR F Sbjct: 263 SRDDDEFVLRPMNCPEHMIIYKSQLHSYRDLPIRIAEIANDFRFEASGALTGIERSRAFT 322 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 D++ F T E + L ++ L R + L D Sbjct: 323 QNDSHIF-CTEEQIASEIKAVTELILDVYKDFNLNQFEFR--------------LSLRDK 367 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 T+ + D D SE+ L ++++ PY + E F + + Sbjct: 368 ENTEKYFGND--DLWERSES-------ELREVLKEMNVPY---YEAEGEAAFYGPKIDVQ 415 Query: 277 VSARGIEVGHIFYFGT---KYSLP----MSATFKGADGKD----HYVQMGSYGIGAMRVV 325 V + +GH T Y LP + G + K H +GS R V Sbjct: 416 VRS---ALGHDVTLSTIQLDYQLPERFELEYVANGGEKKRPVVIHRAILGSID----RFV 468 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDD 383 A ++E + KGI+ P +AP + +I + +AH + + K+ L K+G DD Sbjct: 469 AFLLEET---KGIL-PLWLAPRQAVVIPVSPEAHGEYAK----KVVEELRKIGVRTELDD 520 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++G + A P++V+VG + ++ + ++ + MSLEE + Sbjct: 521 RNEKLGYRIREAQTNKLPIEVVVGDGEIENNGITLRRYGSRQETKMSLEEFL 572 >gi|254785570|ref|YP_003072999.1| threonyl-tRNA synthetase [Teredinibacter turnerae T7901] gi|259516754|sp|C5BSQ1|SYT_TERTT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|237684404|gb|ACR11668.1| threonine--tRNA ligase [Teredinibacter turnerae T7901] Length = 637 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 87/407 (21%), Positives = 153/407 (37%), Gaps = 68/407 (16%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G E+ P + LW SG +D + Sbjct: 255 LQEEAPGMVFWHPKGWSVYTAIEQYMRKVQRENGYKEIKTPQVVDRSLWERSGHWDKFRD 314 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + ++ D A+ P + +F +KSYR+LP F + R+E G+ Sbjct: 315 GMFTVESESRDYAV--KPMNCPCHIQVFNQGLKSYRDLPLRFAEFGSCHRNEASGTLQGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGGDLSH 208 MR R F D + F E + S +F L ++ G + + +R + P Sbjct: 373 MRVRAFTQDDGHIF--CAEDAIQSEVSIFTDLLYEVYRDFGFEDVIIRLSTRP------- 423 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK-- 266 E +V E W A +D N K Sbjct: 424 ---------EQRVGSE-------------------------EVWDKSEKALADALNAKGL 449 Query: 267 LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMG 315 F+ LP IE +G ++ GT +S+P + A F DG M Sbjct: 450 AFEYLPGEGAFYGPKIEFSLKDCIGRVWQCGTIQVDFSMPARLDAQFVAEDGSRQVPVML 509 Query: 316 SYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 I G+ ++ +++G +P +AP ++ ++NI + + EK+ L Sbjct: 510 HRAILGSFERFIGILIENYEGA---FPPWLAPEQVVVMNITDNQA---EYAEKVRNSLQN 563 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G V D E+IG + + P ++VG + + ++ V ++ R Sbjct: 564 EGFRVVSDLRNEKIGFKIREHTIQKVPYLLVVGDQEMENNSVAVRTR 610 >gi|167759625|ref|ZP_02431752.1| hypothetical protein CLOSCI_01983 [Clostridium scindens ATCC 35704] gi|167662751|gb|EDS06881.1| hypothetical protein CLOSCI_01983 [Clostridium scindens ATCC 35704] Length = 480 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 93/434 (21%), Positives = 173/434 (39%), Gaps = 79/434 (18%) Query: 14 NPRDAEIAS-HKLMLRTGMIHQHS--KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 PRD + A + ++R + +S KG ++LP G + + A + + TG + Sbjct: 12 TPRDEDFAQWYTDVVREAELCDYSSVKGCLNYLPNGYAIWELIQADLDKRFKETGVENVY 71 Query: 71 VPTLQSADLW-VESGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +PTL L E+ + + E+ + +R + + PT E + D++ ++SY Sbjct: 72 LPTLIPESLLEKEADHIEGFAPEVAWVTHGGMERLQERLCIRPTSETLFCDLWAKTVQSY 131 Query: 126 RNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 R+LP + Q L++ RP +RSREFL ++ ++ T E ++ +M Y Sbjct: 132 RDLPKVWNQWNTVLRWEKTTRP---FLRSREFLWQEGHTIHATYEEAEERTIQMLHVYED 188 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + +IP + G HE A D Sbjct: 189 CYKE--TLAIPFVS-----GRKAEHEKFAGA-------------------------QDTY 216 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY---SLPMSA 300 ++ +++ A +ATS D+ FG KY + + + Sbjct: 217 TIEALMHDGKALQSATSHFFGSGFPDA-------------------FGIKYVDKNNQLQS 257 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ++ + G + IGA+ +V D G++ P VAP + +I I H + Sbjct: 258 VYETSWG------WSTRSIGALIMVHG------DDSGLVLPPHVAPVECRIIPIAQHKEG 305 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D + L K G V DD + G +F+ ++LG P ++ +G K + ++V + Sbjct: 306 VLDRSFALLDELKKAGYRVKIDDSDKSTGWKFSEQEMLGIPTRIEIGPKDIEKNQVVVVR 365 Query: 421 RLTGIREDMSLEEV 434 R + +SL+E+ Sbjct: 366 RDNREKIVVSLDEI 379 >gi|226311191|ref|YP_002771085.1| threonyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] gi|226094139|dbj|BAH42581.1| threonyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] Length = 637 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 157/408 (38%), Gaps = 39/408 (9%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP G + + R Q E+ P L + LW ESG +D Y Sbjct: 257 MFSEEAPGMPFYLPKGFTVRNELEQFSRRLQQLAQYTEVRSPFLMNERLWKESGHWDHY- 315 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + ++ ++ P + I+++ + SYR+LP + + R E G+ Sbjct: 316 KENMYFSEVDNATYALKPMNCPGHMLIYKNEMHSYRDLPIRYSEFGQVHRHEYSGALNGM 375 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R R F DA+ F + P+ M I+ G E Sbjct: 376 LRVRTFCQDDAHVF-VRPDQIASEIKGMITLIDSIYKVFGF------------------E 416 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + V T S + + S T +++ I + A Y D ++ D Sbjct: 417 YSVALSTRPEDSMGSDELWEAAESSLKTVLEELGMAYEIKDGDGAFYGPKIDF---QITD 473 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAV 328 +L + ++ F K+ L T+ G D + H V + G+M + Sbjct: 474 ALKRRHQCGTIQLD----FQMPEKFDL----TYVGQDNEKHRPVVLHRAMYGSMERFIGI 525 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G IW + P + ++NI +V E++ +L + G V D E+I Sbjct: 526 LIEHYAGAFPIW---LTPIQARIMNIS---EVHMPYAEQVREKLQQAGIRVELDGRNEKI 579 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G + A + P +++G K V+D + ++ R G M+++ + Sbjct: 580 GYKIREAQVEKIPYMLVIGEKEVADGTLSVRKRGVGDEGAMTVDAFVE 627 >gi|307266242|ref|ZP_07547784.1| threonyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306918772|gb|EFN49004.1| threonyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 634 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 97/413 (23%), Positives = 160/413 (38%), Gaps = 51/413 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH G + P G + + R+E + G E+ P + + +LW SG +D Y K Sbjct: 254 IHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEELWRRSGHWDHY-K 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + +++S + SYR+LP ++ L R EL G+M Sbjct: 313 ENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVHRHELSGVLHGLM 372 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKM--FVSYL-RIFHRLGLKSIPMRAESGPIGGDLS 207 R R F DA+ F +TPE + + V Y +IF + R E+ +G D Sbjct: 373 RVRSFTQDDAHLF-MTPEQVEDEILGVINLVDYFYKIFGFEYFVELSTRPENS-MGSDED 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A + + + ++ P D A Y D H L Sbjct: 431 WELATNA------LISALNRVNLPYKVNEGD--------------GAFYGPKIDFH---L 467 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMR 323 DS+ R + G I F ++ L + G DG+ H + + G++ Sbjct: 468 KDSI-------GRTWQCGTIQLDFQMPERFEL----EYIGPDGEKHRPIMLHRVIYGSIE 516 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +P +AP ++ ++ I + +Y RL + DD Sbjct: 517 RFIGILTEHFAGA---FPTWLAPVQVRVLPISDKHYAY---AQHVYGRLLENDIRAELDD 570 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+IG + A L P +IVG K V V ++ R G +SL E I Sbjct: 571 RNEKIGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKEGDLGAISLNEFIE 623 >gi|260103159|ref|ZP_05753396.1| threonine-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|260083018|gb|EEW67138.1| threonine-tRNA ligase [Lactobacillus helveticus DSM 20075] Length = 644 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 92/405 (22%), Positives = 163/405 (40%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I + + G + P L + D + SG + Y +M Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + IF+ HI+SYR+LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VVLDQVQTEFAKILKLIMEVYKDFDITDYYFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M D + L+ + E A Y D+ + +L + Sbjct: 425 PKNTDKYFANDEMWEKSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPDRFGL----TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N +AH + EK+ A L+K G V DD E++G + Sbjct: 534 KGAFPTW---LAPVQAEIIPVNNEAHGEY----AEKVRAELAKRGFRVEVDDRNEKMGYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G + + KV ++ T SL++ IN Sbjct: 587 IRESQTQKVPYTLVLGDEEMKSGKVNLRRYGTDEEISKSLDDFIN 631 >gi|167037181|ref|YP_001664759.1| threonyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115599|ref|YP_004185758.1| threonyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856015|gb|ABY94423.1| threonyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928690|gb|ADV79375.1| threonyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 634 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 96/413 (23%), Positives = 160/413 (38%), Gaps = 51/413 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH G + P G + + R+E + G E+ P + + +LW SG +D Y K Sbjct: 254 IHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEELWRRSGHWDHY-K 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + +++S + SYR+LP ++ L R EL G+M Sbjct: 313 ENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVHRHELSGVLHGLM 372 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKM--FVSYL-RIFHRLGLKSIPMRAESGPIGGDLS 207 R R F DA+ F +TPE + + V Y +IF + R E+ +G D Sbjct: 373 RVRSFTQDDAHLF-MTPEQVEDEILGVINLVDYFYKIFGFEYFVELSTRPENS-MGSDED 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A + + + ++ P D A Y D H L Sbjct: 431 WELATNA------LISALNRVNLPYKVNEGD--------------GAFYGPKIDFH---L 467 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMR 323 DS+ R + G I F ++ L + G DG+ H + + G++ Sbjct: 468 KDSI-------GRTWQCGTIQLDFQMPERFEL----EYIGPDGEKHRPIMLHRVIYGSIE 516 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +P +AP ++ ++ I + +Y RL + DD Sbjct: 517 RFIGILTEHFAGA---FPTWLAPVQVRVLPISDKHYAY---AQNVYGRLLENDIRAELDD 570 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E++G + A L P +IVG K V V ++ R G +SL E I Sbjct: 571 RNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIE 623 >gi|89073900|ref|ZP_01160406.1| threonyl-tRNA synthetase [Photobacterium sp. SKA34] gi|89050228|gb|EAR55732.1| threonyl-tRNA synthetase [Photobacterium sp. SKA34] Length = 631 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 89/397 (22%), Positives = 151/397 (38%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G + IRE+ N E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWTIFRELEVFIREKLNEYDYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + + + + Y + G +I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIFCTEAQVQQEVTSCIEMVY-DTYKTFGFDNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E+ + + + M+ P I E A Y + L Sbjct: 433 ----AMWDKAESDLITALESMEIPF--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + ++LP + AT+ G D + H M I G++ Sbjct: 472 HDCLD-------RAWQCGTV---QLDFALPERLGATYVGEDNERHTPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI + ++I +L K G V D Sbjct: 522 FIGILIEDYAG---FFPTWLAPQQAVVMNIT---DAQSEYVQEIVEKLKKCGIRVNADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V V ++ R Sbjct: 576 NEKIGFKIREHTLKRVPFMLVCGDKEVEAGVVAVRTR 612 >gi|320335305|ref|YP_004172016.1| Prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] gi|319756594|gb|ADV68351.1| Prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] Length = 488 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 81/409 (19%), Positives = 154/409 (37%), Gaps = 69/409 (16%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLRLADRNDK 102 P G + + + +E TG + PTL E+ + + E+ + + Sbjct: 46 PYGSAIWERIQRWLDDEFKATGHESLVFPTLIPMSFITKEADHVEGFAPELFTVNKIGTE 105 Query: 103 AM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMK 158 + + PT E ++ ++ + SYR+LPF YQ FR ELR + +R+ EF Sbjct: 106 VLAEPYVMRPTSETIIGHMWSQWLNSYRDLPFLHYQWGSVFRAELRTK-PFLRTSEFYWH 164 Query: 159 DAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 + + T + ++ L ++HR Sbjct: 165 EGH----TAHADEAEARAEVMAMLNLYHR------------------------------- 189 Query: 219 TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 FC +D + P+ + S E++ A S E Sbjct: 190 ---FC-RDVLALPV---------VRGEKSASERFAGAVATYS-----------IEGMMRD 225 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G +S F+ + ++ Y S+ I + R++ A+I + D KG+ Sbjct: 226 GKALQSGTSHYLGQNFSRAFDVKFQTREQREEYAHTTSWAISS-RIIGALIMTHGDDKGL 284 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVA 395 + P +AP ++ +I + D V + E + L G V D G G ++ Sbjct: 285 MLPPEIAPHQVVIIPVFRKDNVDQMIAEAEALAGELRAQGVRVKVDKRDGVTNGFKYNDW 344 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +L G P+++ +G + + V +K+R +E + E I+ + R S Sbjct: 345 ELKGVPVRMELGPRDLESGVVVVKNRTGDEKETLPRHEAISGMAARLSG 393 >gi|162447220|ref|YP_001620352.1| threonyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] gi|189083597|sp|A9NF46|SYT_ACHLI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161985327|gb|ABX80976.1| threonyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] Length = 642 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 94/418 (22%), Positives = 169/418 (40%), Gaps = 66/418 (15%) Query: 18 AEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIREEQ 61 AE+ H +ML + H K G+ WLP G + I +++ Sbjct: 224 AELDKHLVMLEERKLRDHRKIGKDLDIFMTSQEVGSGLPFWLPKGATIRRIIERYITDKE 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRS 120 G + + P + + + + +SG +D Y + M D D M + P + I++ Sbjct: 284 LELGYLHVYTPIMANVEFYKQSGHWDHYHENMYPPMDLGDGEMLVLRPMNCPHHMMIYKK 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 I SYR LP F ++ + R E G+ R RE + DA+ F + P+ K + ++ Sbjct: 344 DIHSYRELPIRFAELGMMHRYEKSGALSGLQRVREMTLNDAHIF-VRPDQIKEEFMRVVH 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + ++ + R LS+ D + + D M SE Sbjct: 403 LIIEVYKDFKITDYSFR---------LSYR-----DPENKEKYFDDDQMWQRAESE---- 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE-----VGHIFYFGTKY 294 L +++++ PY + + + + +A G+E V F ++ Sbjct: 445 -----LKNVMDEMKLPYKEA--IGEAAFYGPKLDIQVRTAMGMEETLSTVQLDFLLPERF 497 Query: 295 SLPMSATFKGADGKDHY--VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISL 351 L T+ G DGK+++ V + + M R VA +IE + G +W +AP ++ L Sbjct: 498 DL----TYVGEDGKNNHRPVVIHRGVVSTMERFVAYLIE-EYKGSFPLW---LAPVQLKL 549 Query: 352 I--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 I N+ H +D ++ +L K+G V D E++G + A L P Q++VG Sbjct: 550 IPVNLDLH----KDYVMNLHEQLKKLGFRVESDFRNEKLGYKIREAQTLKIPYQLVVG 603 >gi|294155892|ref|YP_003560276.1| proline--tRNA ligase [Mycoplasma crocodyli MP145] gi|291600080|gb|ADE19576.1| proline--tRNA ligase [Mycoplasma crocodyli MP145] Length = 478 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 3/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y +S P S FK +D YV S+G+ + R++ A+I + D +G+ Sbjct: 221 GRALQAGTSHYLAQNFSKPYSILFKNKKNEDEYVYQTSWGV-STRLLGAIIMTHGDNRGV 279 Query: 339 IWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I P VAP +I LI + A ++ ++++ L + V D +Q G + A +++ Sbjct: 280 IIPPRVAPVQIDLIELFAAKSPKVKEVSDELFELLRR-KWRVRVDKSDKQPGFKAANSEI 338 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ +G + + +++V + R T + M+ +EV Sbjct: 339 QGVPLRIEIGPRDLENNQVTLVRRDTLEKIVMNYKEV 375 Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 15/153 (9%) Query: 51 DNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM----IY 106 +N+N I +E+ + + +P + +E + + E+ + DK + Sbjct: 52 ENLNKIFKEKDVENVYLPLLIP---ESLFNLERDHLEGFNPELATVTHVGDKELSEKYFI 108 Query: 107 GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLT 166 PT E + D+F++ I+SY +LP + Q R E + +RSREFL ++ ++ Sbjct: 109 RPTSEVLFADLFKNSIESYNDLPIIYNQWANVVRWE-KTTNPFLRSREFLWQEGHTCHSD 167 Query: 167 P-------EGSKHSYNKMFVSYLRIFHRLGLKS 192 P G +Y+K ++L I +G K+ Sbjct: 168 PIEARRFTRGMITTYSKFLKNFLAIPTIIGKKT 200 >gi|229171240|ref|ZP_04298831.1| Prolyl-tRNA synthetase 2 [Bacillus cereus MM3] gi|228612233|gb|EEK69464.1| Prolyl-tRNA synthetase 2 [Bacillus cereus MM3] Length = 476 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 82/406 (20%), Positives = 160/406 (39%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ H L L + Sbjct: 153 LRTTEFLWQEGHTIHETAEESQ----------AETLHILNLYA----------------- 185 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 186 -----------SFC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQEHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|329895719|ref|ZP_08271123.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC3088] gi|328922195|gb|EGG29550.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC3088] Length = 641 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 88/423 (20%), Positives = 157/423 (37%), Gaps = 70/423 (16%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W P G + +R Q + G E+ P + LW +SG D +G + Sbjct: 256 QEEAPGMVFWHPKGWTVYQVIEQYMRNRQRQEGYKEIKTPQVVDMTLWHKSGHADKFGDD 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M L D+ P + +F +KSYR+LP + R+E G+MR Sbjct: 316 MFMLK-AEDREFAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGIMR 374 Query: 152 SREFLMKDAYSF----DLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGGDL 206 R F DA+ F + PE S+ F+ +L ++ G + R + P Sbjct: 375 VRGFTQDDAHIFCTEDQIQPEVSR------FIDFLHGVYEDFGFNEVIYRLSTRP----- 423 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E +V +D+ ++ A D HN Sbjct: 424 -----------EKRVGSEEDW----------------------DRAEKALADALDAHNLP 450 Query: 267 LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQM 314 ++ LP IE +G ++ GT +S+P + A + DG + V + Sbjct: 451 -WELLPGEGAFYGPKIEFSLKDCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGARKTPVML 509 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 +G+ ++ +G+ +P +AP +++++NI + + + L+ Sbjct: 510 HRAILGSFERFIGILIEHFEGR---FPTWLAPEQVAVMNITDKQG---EFTQNVVDYLNN 563 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G D E+IG + L P ++VG K V V ++ R M+L + Sbjct: 564 SGFRAIADLRNEKIGFKIRERTLAKIPYLLVVGDKEVETQSVAVRTRDGKDLGTMTLADF 623 Query: 435 INY 437 Y Sbjct: 624 AEY 626 >gi|209966088|ref|YP_002299003.1| threonyl-tRNA synthetase ThrS [Rhodospirillum centenum SW] gi|238065118|sp|B6IV67|SYT_RHOCS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|209959554|gb|ACJ00191.1| threonyl-tRNA synthetase ThrS [Rhodospirillum centenum SW] Length = 651 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 160/408 (39%), Gaps = 59/408 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + IR + + G +E+ P L + L+ SG +D YG Sbjct: 256 VQEEAVGSVFWHPKGWALYRTLENYIRTKLDAAGYVEVRTPQLYDSSLFKASGHWDMYGD 315 Query: 92 EMLRL-----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M ++ D +K + P + IFR +KSYR+LP + R+E Sbjct: 316 NMFKIRESVAEDGTEKFLGVKPMNCPAHVQIFRQGLKSYRDLPLRMAEFGNCHRNEPSGA 375 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---I 202 G++R R F DA+ F T + + F L ++ LG I ++ P + Sbjct: 376 LHGILRVRNFTQDDAHIF-CTEDQVGQEAKEYFALQLGVYKDLGFDKIAVKLALRPDVRL 434 Query: 203 GGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDV 262 G D + + +++ + + + + +F+++ + Y + Sbjct: 435 GTDETWD-------------KAEESLRVALRANDLEFEELPGEGAF-------YGPKVEF 474 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSY 317 H L D+ +G + GT + LP + A++ G DG H M Sbjct: 475 H---LTDA-------------IGRSWQCGTLQLDFQLPERLDASYIGQDGARHRPVMLHR 518 Query: 318 GI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 I G++ ++ + GK +W +AP ++ + I + + + L + G Sbjct: 519 AILGSLERFIGMMIEHYAGKFPLW---LAPVQVVVATIVSEADAY---AQTVAETLRRAG 572 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 V D E+I + L P+ ++VG++ V ++ RL G Sbjct: 573 LRVEADVRNEKINLKVREHSLAKVPVMLVVGAREAEQGTVAVR-RLGG 619 >gi|88706032|ref|ZP_01103740.1| threonyl-tRNA synthetase [Congregibacter litoralis KT71] gi|88699746|gb|EAQ96857.1| threonyl-tRNA synthetase [Congregibacter litoralis KT71] Length = 645 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 99/452 (21%), Positives = 161/452 (35%), Gaps = 84/452 (18%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD KL L + + G+ W P G + +RE+Q Sbjct: 230 QYLHRIEEAEKRDHRKIGKKLDLF--HTQEEAPGMVFWHPQGWTIYQVIEQYMREQQRAN 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P L LW +SG D +G +M L +++ P + +F ++S Sbjct: 288 GYQEIKTPQLVDMSLWEKSGHADKFGDDMFML-QADEREFAVKPMNCPCHVQVFNQGLRS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R+E G+MR R F D + F E S F+ +L Sbjct: 347 YRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDGHIF--CTEEQIQSEVSTFIDFLH 404 Query: 184 IFHR-LGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +R G + R + P +G D Sbjct: 405 AVYRDFGFDEVIYRLSTRPPKRVGSD---------------------------------- 430 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFD--SLPENKRVSARGIE------VGHIFYFG 291 E W A +D + + D LP IE +G ++ G Sbjct: 431 ----------EDWDRAEKALADALDAQELDWQELPGEGAFYGPKIEFSLKDCIGRVWQMG 480 Query: 292 T---KYSLP--MSATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 T +S+P + A + DG H +GS+ R + +IE + +G +W Sbjct: 481 TVQVDFSMPGRLDAQYVAEDGSRKTPVMLHRAILGSF----ERFIGILIE-NFEGAFPVW 535 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 +AP + ++NI + + + L G VF D E+IG + + Sbjct: 536 ---LAPKQAVVLNITEKQD---EYVQFVEDSLKNKGFRVFSDLRNEKIGFKIREHTIQRI 589 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 P ++VG K V V ++ R MS+E Sbjct: 590 PYLLVVGEKEVEAKTVAVRSRNGEDLGTMSIE 621 >gi|325298803|ref|YP_004258720.1| threonyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] gi|324318356|gb|ADY36247.1| threonyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] Length = 647 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 98/432 (22%), Positives = 161/432 (37%), Gaps = 73/432 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 261 GKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIGNKLLYVTSGHYAKYGKDSFQ 320 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + I+R+ +SYR+LP + R E G+ R Sbjct: 321 PIHTPEEGEEYFLKPMNCPHHCMIYRNSPRSYRDLPLRIAEFGTVCRYEQSGELHGLTRV 380 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K +LR+ + + Sbjct: 381 RSFTQDDAHIF-CRPDQVKD-------EFLRVMDIISI---------------------- 410 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S +F +F D ++ + E W A + EK Sbjct: 411 --------VFKSMNFENF---EAQISLRDKVNREKYIGSDENWEKAEQAIVEACQEKGLK 459 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + GAD + H V + Sbjct: 460 AKVEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGADNQKHRPVMIH 519 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W PD VA IS + + +++ L Sbjct: 520 RAPFGSMERFVAVLIEHTA-GKFPLWLTPDQVAVLPIS--------EKFNEYADQVRLEL 570 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 K DD E+IG + ++ P +IVG K ++ +V ++ + G + + +E Sbjct: 571 KKYDIRALVDDRNEKIGRKIRDNEMKHIPYMLIVGEKEAANGEVSVRKQGEGDKGTVKIE 630 Query: 433 EVINYASHRFSN 444 E + N Sbjct: 631 EFAKNIAEEVHN 642 >gi|114799933|ref|YP_761871.1| threonyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] gi|123027650|sp|Q0BXC2|SYT_HYPNA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114740107|gb|ABI78232.1| threonyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] Length = 657 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 98/441 (22%), Positives = 175/441 (39%), Gaps = 61/441 (13%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL + + H ++G W P G + A IR +Q+ G +E+ P Sbjct: 239 EAEKRDHRKLGAQLDLFHFQPEAQGSVFWHPKGFMIWRELEAYIRRQQDADGYVEVKTPQ 298 Query: 74 LQSADLWVESGRYDSYGKEMLRLADR-----NDKAMIYG--------PTHEEVMTDIFRS 120 L ++ W +SG + + + M + D +D ++ G P + IF++ Sbjct: 299 LLNSVFWEKSGHWSKFRENMFVVPDEIPSTESDAPILSGEGELMALKPMNCPAHVQIFKN 358 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHS--YNKM 177 +SYR+LP + R+E G+MR R+ DA+ F + + + + K+ Sbjct: 359 AQRSYRDLPIRMAEFGCCHRNEAHGALHGLMRVRQMTQDDAHIFCREDQIADETLRFLKL 418 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 F + ++ GL I + + P + A T ET K D + + Sbjct: 419 FET---VYGDFGLSEISYKLATRP---------EMRAGTDETWDRAEKALAD-ALTAAGM 465 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 F SI E A Y + H L D++ R + G F Y LP Sbjct: 466 TF-------SIAEGEGAFYGPKLEFH---LTDAI-------GRTWQCG---TFQLDYVLP 505 Query: 298 --MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + A + G+DG H M + G ++ ++ G +W ++P ++ + I Sbjct: 506 ERLDAEYTGSDGAKHRPVMLHRAVFGTFERFMGILIENYAGSFPLW---MSPVQVVVAAI 562 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D E+ A L K G V D E I + + P+ +VG++ D Sbjct: 563 T---DAAGDYAEEAAAALRKAGLRVEVDKRNETINYKVREHSVQKVPVIAVVGAREAEDR 619 Query: 415 KVEIKHRLTGIREDMSLEEVI 435 K+ ++ + ++ +SL+E + Sbjct: 620 KLALRRLGSNGQQIISLDEAL 640 >gi|288574759|ref|ZP_06393116.1| threonyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570500|gb|EFC92057.1| threonyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 630 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 86/419 (20%), Positives = 163/419 (38%), Gaps = 48/419 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H+ G + P G ++ + + + G ++ P + + DLW++SG +D Y + Sbjct: 251 LHKEGPGFPFFHPKGMVVINTLIDFWSKVHRKNGYDQIRTPMILNRDLWIQSGHWDHY-R 309 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + +D+ P + +++S + SYR+LP ++ + R E G+M Sbjct: 310 ENMYFTEIDDQPYAIKPMNCPGGILVYKSDLHSYRDLPLRLGELGIVHRHEKSGVLHGLM 369 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ + TP+ K + + I+ + + + P S E Sbjct: 370 RVRCFTQDDAHHY-CTPDQIKDEVSLIMDMVDYIYSEVFGFKFHVELSTRPDNSMGSDEM 428 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 LA+ +V + P + A Y D H E Sbjct: 429 WELAEKSLREVLEERGTTYVLNPGDG-----------------AFYGPKIDFHLEDC--- 468 Query: 271 LPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +G + GT + +P T+ G+DGK+H M I G++ Sbjct: 469 -------------IGRTWQCGTIQLDFQMPEKFDVTYIGSDGKEHRPAMLHRTILGSIER 515 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G W +AP ++ ++ + D V D + + A L V D Sbjct: 516 FLGILIEHYAGAFPFW---IAPVQVKVLAV-GDDHV--DYAKDLKALLQDREYRVELDCR 569 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E++G + A + P ++VG K + V ++ R G + MS E+++ +FS Sbjct: 570 DEKLGRKIRDAQMEKVPFMLVVGDKELETGTVSVRDRSEGDKGSMSKEDLLELLKGQFS 628 >gi|320353536|ref|YP_004194875.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] gi|320122038|gb|ADW17584.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] Length = 641 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 88/422 (20%), Positives = 160/422 (37%), Gaps = 42/422 (9%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y + + RD +L L T + Q G+ W P G + ++E R Sbjct: 232 QQYLARLEEARKRDHRKLGKQLGLFT-IQDQIGPGLILWQPRGALLRRLIEDYWKDEHYR 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + DLW SG D YG+ M + ++ P + ++ + Sbjct: 291 NGYQLLYTPHIARQDLWKTSGHLDFYGENMYSAMEIDEVMYQLKPMNCPFHIGVYNADKH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR P + ++ +R E G+MR R F DA+ F + + +N + ++ L Sbjct: 351 SYREFPIRWCELGTVYRYERTGALHGLMRVRGFTQDDAHIFCRPDQLEEEIFNIIDLN-L 409 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I G + + P S E L+ Q K P E + Sbjct: 410 HILKTFGFDQYDVYLSTRPEKYVGSDEHWQLSTQALKQALEKKGLAYQLDPGEGVFYGPK 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSA 300 I + K+ D L + + S ++ ++LP Sbjct: 470 IDI--------------------KIKDQLGRSWQCSTIQVD----------FNLPERFQM 499 Query: 301 TFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG +H + + +G++ V+ + G +W +AP + ++NI DQ Sbjct: 500 NYTGVDGAEHQPIMIHRALMGSLERFIGVLIEHYAGAFPLW---LAPEQARIMNI-TDDQ 555 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + CE+++ARL +G + D E++ + A L+ P +IVG + + V ++ Sbjct: 556 --GEYCEQVHARLRAMGVRIDKDVRNEKLNYKIREAQLMKVPYMLIVGEREKQEGTVTVR 613 Query: 420 HR 421 R Sbjct: 614 KR 615 >gi|222151594|ref|YP_002560750.1| threonyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] gi|222120719|dbj|BAH18054.1| threonyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] Length = 642 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 82/386 (21%), Positives = 161/386 (41%), Gaps = 34/386 (8%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + S DL+ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRRELERYIVDKEVALGYDHVYTPIMGSVDLYKTSGHWDHYQEDMFPPM 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++A++ P + ++++ SYR LP ++ + R E G+ R R Sbjct: 322 EMENEALVLRPMNCPHHMMVYKNKPHSYRELPIRIAELGMMHRYEASGAVSGLQRVRGMT 381 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 + DA+ F + P+ K + ++ + ++ K R LS+ D+ Sbjct: 382 LNDAHIF-VRPDQIKEEFIRVVQLVIDVYKDFKFKEYKFR---------LSYR-----DS 426 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLN-SIVEQWTAPYAATSDVHNEKLFDSLPENK 275 +T+ + D M + D + L+ A Y DV ++ +L + + Sbjct: 427 EDTEKYFQDDEMWERAQLMLKEAVDEMGLDYEEAPGEAAFYGPKLDV---QVKTALGKEE 483 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSHD 334 +S ++ F ++ L + G+DG+ H + G I M A + + Sbjct: 484 TLSTVQLD----FLLPERFDL----EYIGSDGEKHRPVVIHRGVISTMERFVAFLTEEYK 535 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 G +W +AP ++ +I + ++V D K+Y L G DD E++G + Sbjct: 536 GAYPLW---LAPNQLEIIPVS--NEVHYDYARKLYDELKSQGVRCHIDDREEKMGYKIRE 590 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKH 420 A + P QV+VG K + +++V ++ Sbjct: 591 AQMHKVPYQVVVGDKEIENNEVNVRQ 616 >gi|256751279|ref|ZP_05492159.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256749834|gb|EEU62858.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 634 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 96/412 (23%), Positives = 160/412 (38%), Gaps = 51/412 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH G + P G + + R+E + G E+ P + + +LW SG +D Y K Sbjct: 254 IHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEELWRRSGHWDHY-K 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + +++S + SYR+LP ++ L R EL G+M Sbjct: 313 ENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVHRHELSGVLHGLM 372 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKM--FVSYL-RIFHRLGLKSIPMRAESGPIGGDLS 207 R R F DA+ F +TPE + + V Y +IF + R E+ +G D Sbjct: 373 RVRSFTQDDAHLF-MTPEQVEDEILGVINLVDYFYKIFGFEYFVELSTRPENS-MGSDED 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A + + + ++ P D A Y D H L Sbjct: 431 WELATNA------LISALNRVNLPYKVNEGD--------------GAFYGPKIDFH---L 467 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMR 323 DS+ R + G I F ++ L + G DG+ H + + G++ Sbjct: 468 KDSI-------GRTWQCGTIQLDFQMPERFEL----EYIGPDGEKHRPIMLHRVIYGSIE 516 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +P +AP ++ ++ I + +Y RL + DD Sbjct: 517 RFIGILTEHFAGA---FPTWLAPVQVRVLPISDKHYAY---AQNVYGRLLENDIRAELDD 570 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++G + A L P +IVG K V V ++ R G +SL E I Sbjct: 571 RNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKEGDLGAISLNEFI 622 >gi|322807830|emb|CBZ05405.1| prolyl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 412 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 1/136 (0%) Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ATF GK + + ++++ VIE + D GI+WP + FK+ + D Sbjct: 267 CATFIDNKGKSKPFTIYKGFMDIYKIISWVIEQNKDELGIVWPMETSAFKVIVTIANVKD 326 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + EKIY+ L +G DD E+ G +F ADL G P+++ VG K + ++ VEI Sbjct: 327 EQQFKVGEKIYSSLVNIGIGTILDDRKERAGVKFKDADLWGIPIRITVG-KNIKENNVEI 385 Query: 419 KHRLTGIREDMSLEEV 434 K R + ++++ ++++ Sbjct: 386 KLRNSKEKKEIPIDQL 401 >gi|42779590|ref|NP_976837.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|81411119|sp|Q73E50|SYP2_BACC1 RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA ligase 2; Short=ProRS 2 gi|42735506|gb|AAS39445.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987] Length = 476 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 81/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ A R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGVSA-RMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQEHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +++E++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMEQL 376 >gi|301056082|ref|YP_003794293.1| threonyl-tRNA synthetase [Bacillus anthracis CI] gi|300378251|gb|ADK07155.1| threonyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 645 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 173/424 (40%), Gaps = 52/424 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIRE 59 + AE+ H ML H K G+ WLP G + I + Sbjct: 229 KKAELDEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVD 288 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 ++ G + P L S +L+ SG ++ Y M + +++ ++ P + +++ Sbjct: 289 KEASLGYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYK 348 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + I SYR LP ++ R E+ G+ R R + DA+ F + P+ K ++ Sbjct: 349 NDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIF-VRPDQIKEELKRVV 407 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ GL++ R LS+ D +T+ + + D M + Sbjct: 408 NLTLEVYKDFGLENYSFR---------LSYR-----DPEDTKKYYADDEMWEKAQGMLKE 453 Query: 239 FDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + L+ E A Y DV ++ +L +++ +S ++ F ++ L Sbjct: 454 AMDEMGLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFEL- 505 Query: 298 MSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + G DGK H + G+ + R VA +IE KG +P +AP + +I + Sbjct: 506 ---AYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQAQVIPVS 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 QV D +K+ L + G V D E+IG + A + P ++VG V+++ Sbjct: 559 P--QVHLDYAKKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENG 616 Query: 416 VEIK 419 V ++ Sbjct: 617 VNVR 620 >gi|159030629|emb|CAO88297.1| thrS [Microcystis aeruginosa PCC 7806] Length = 599 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 92/428 (21%), Positives = 170/428 (39%), Gaps = 64/428 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML-RL 96 G+ W P G + +++EQ + G + + P + DL+ SG + Y ++M + Sbjct: 213 GLPLWTPKGTLIRSLLEDFLKKEQLKRGYLPVVTPHIARVDLFKISGHWQKYKEDMFPMM 272 Query: 97 ADRNDKA-----MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 AD + A + P + I++S ++SYR LP + +R E G+ Sbjct: 273 ADDEESASKEIGFVLKPMNCPFHIQIYKSDLRSYRELPMRLAEFGTVYRYEQSGELGGLT 332 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-----AESGP-IGG 204 R R F + D++ F +TPE + + L +F L LK+ R ES IG Sbjct: 333 RVRGFTVDDSHLF-VTPEQLDKEFLSVVDLILTVFKSLQLKNFKARLSFRDPESDKYIGS 391 Query: 205 DLSHEFIVLADTGETQVFCSKDFMD-FPIPSENTDFD---DIISLNSIVEQWTAPYAATS 260 D + E A Q MD F P E + D I +++ +W Sbjct: 392 DEAWEKAQSAIRKAVQTLG----MDYFEAPGEAAFYGPKLDFIFQDALEREW-------- 439 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSY 317 ++G + Y+LP + DG + V + Sbjct: 440 ----------------------QLGTV---QVDYNLPERFELEYVAEDGNRKRPVMIHRA 474 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ + ++ + G +W +AP +I L+ + + Q+ D +++ ++ +G Sbjct: 475 PFGSLERLIGILIEEYAGDFPLW---LAPVQIRLLPV-SDSQL--DYAKEVTVKMQLLGI 528 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D GE++G A+ P+ +VG+K + + + I+ R G +S+EEV+ Sbjct: 529 RAETDTSGERLGKMIRNAETAKIPVMAVVGAKEMESNSLSIRTRAAGDLGVISVEEVVAK 588 Query: 438 ASHRFSNN 445 N+ Sbjct: 589 LESAIQNH 596 >gi|159899369|ref|YP_001545616.1| threonyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|159892408|gb|ABX05488.1| threonyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 604 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 97/425 (22%), Positives = 171/425 (40%), Gaps = 57/425 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG------- 90 G+ WLP G D + +R+ Q G + + P + DL+ SG + +Y Sbjct: 217 GLALWLPKGAILRDVLERFLRQAQIERGYLPVVTPHMGKIDLYKTSGHWYTYRDGIFPPM 276 Query: 91 KEMLRLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 +E+ N + IY P + +I+ S +SYR+LP + +R E Sbjct: 277 REIENDDTENPEGEIYLLKPMNCPHHIEIYASEPRSYRDLPLRLAEFGTVYRYEHSGELT 336 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G++R R F + D++ F +TP+ + + K+ L +F +GLK R Sbjct: 337 GLLRVRSFTVDDSHLF-VTPDQLEAEFLKVVDLILFVFGTMGLKDFQAR----------- 384 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFD--DIISLNSI-VEQWTAPYAATSDVHN 264 + L + G + S + + ++N + + LN I VE A Y D Sbjct: 385 ---VGLREVGNPKYIGSDEVWE---KAQNAIINAAEKKGLNYIVVEGEAAFYGPKLDF-- 436 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDH---YVQMGSYGI 319 +F + V R ++G + Y+LP + G DG+ H + +G Sbjct: 437 --IF------RDVLGRQWQLGTV---QVDYNLPERFEIEYTGEDGQKHRPIMIHRAPFG- 484 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 R V +IE + G +W +AP +++L+ I E + A+L+ G V Sbjct: 485 SIERFVGTLIE-QYAGAFPVW---LAPVQVTLVPITDRHVAY---AESVAAKLNAQGLRV 537 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 D ++ ++ A L P ++VG K V ++ R G +S++E I Sbjct: 538 EVDASNNRMNAKIRDAQKLKIPYMLVVGDKEEEAGAVAVRQRSGGDLGSISVDEFIARIK 597 Query: 440 HRFSN 444 +N Sbjct: 598 DEVAN 602 >gi|327439263|dbj|BAK15628.1| threonyl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 643 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 87/403 (21%), Positives = 172/403 (42%), Gaps = 36/403 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S L+ SG ++ Y M Sbjct: 264 QGLPLWLPNGATIRRTIERYIVDKELSLGYKHVYTPVLGSKKLYETSGHWEHYQDGMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + +F++ + SYR+LP ++ R E+ G+ R R Sbjct: 324 MEMDNETLVLRPMNCPHHMMVFKNGLHSYRHLPIRIAELGTMHRYEMSGAVSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + K+ L ++ LK R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKAEFKKVVELILEVYKDFDLKDFSFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M + D++ I E A Y DV ++ ++ + Sbjct: 429 PNNTEKYFDDDQMWETAQAMLKEAMDELGYDYFIAEDEAAFYGPKLDV---QVKTAIGKE 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L ++ G DG+ + G+ + R VA +IE Sbjct: 486 ETLSTAQLD----FLLPQRFDL----SYIGEDGQPQRPVVIHRGVVSTMERFVAFLIE-- 535 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 + KG +P +AP + ++I + + V D ++ +L+ G V DD E++G + Sbjct: 536 -EYKG-AFPTWLAPVQATIIPVS--NAVHYDYAREVQEKLAAAGIRVEMDDREEKLGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P +++G K V+++ V I+ + E +S E+ + Sbjct: 592 REAQMQKIPYMLVLGDKEVAENAVNIRRYGSKDSETISFEQFL 634 >gi|325954344|ref|YP_004238004.1| prolyl-tRNA synthetase [Weeksella virosa DSM 16922] gi|323436962|gb|ADX67426.1| Prolyl-tRNA synthetase [Weeksella virosa DSM 16922] Length = 492 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 87/166 (52%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F +GK YV S+G+ + R++ A+I + D G+ Sbjct: 233 GKALQAGTSHFLGQNFAKAFDVKFTTNEGKQDYVWATSWGV-STRLMGALIMTHSDDYGL 291 Query: 339 IWPDSVAPFKISLINI-KAHDQVCR--DACEKIYARLSKVGCDV-FWDDMGEQIGSQFAV 394 + P +AP ++ ++ I ++ +Q+ + + +I L +G V F DD + G +FA Sbjct: 292 VLPPKIAPIQVVIVPIFRSEEQLIQVSEVANRIKNELHSIGISVKFDDDEKTKPGWKFAE 351 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++ +G K + +++VEI R T + + ++ + +Y + Sbjct: 352 YELKGVPVRIAIGPKDLENNQVEIARRDTLEKSTIPMDGISSYVEN 397 Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GK M+ + ++ +I PT E ++ +++ I+SYR+LP Q R E+R R Sbjct: 104 GKLMVDPEAKLEEELIVRPTSEAIIWSTYKNWIQSYRDLPILINQWANVVRWEMRTRL-F 162 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 +R+ EFL ++ ++ T E + +M Y + Sbjct: 163 LRTTEFLWQEGHTAHATKEEAISESRQMLDVYTEV 197 >gi|241764278|ref|ZP_04762308.1| threonyl-tRNA synthetase [Acidovorax delafieldii 2AN] gi|241366347|gb|EER60877.1| threonyl-tRNA synthetase [Acidovorax delafieldii 2AN] Length = 639 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 91/394 (23%), Positives = 152/394 (38%), Gaps = 62/394 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I H+ G+ W P G V +R G +E+ P L LW ++G +D Y Sbjct: 255 IDDHAPGVVFWHPKGWAVWQQVEQYMRRVYRDNGYLEVKGPQLLDKTLWEKTGHWDKYRD 314 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M +++ D A+ P + IF+ IKSYR+LP + + R+E G+ Sbjct: 315 NMFTTESEKRDYAL--KPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHGI 372 Query: 150 MRSREFLMKDAYSF----DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---I 202 MR R F D + F + PE + +Y + +++ G +I + + P I Sbjct: 373 MRVRGFTQDDGHIFCTEDHILPECT--AYTALL---QKVYKDFGFSNIIYKVATRPEARI 427 Query: 203 GGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDV 262 G D S D E + S + + +F+ AP Sbjct: 428 GSDESW------DKAEHALMES-------LRASGCEFE------------IAP--GDGAF 460 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGS 316 + K+ +L + +G + GT +S+P + A + G DG H V + Sbjct: 461 YGPKIEYTLKDA---------IGRQWQCGTMQVDFSMPERLDAEYVGEDGARHRPVMLHR 511 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 +G++ ++ H G W +AP +IS++NI A CR+ K+ L Sbjct: 512 AIVGSLERFIGILIEQHSGALPTW---LAPVQISVLNITDAQADYCREIAAKLQKLLPHQ 568 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 V D E+I + L P ++ G K Sbjct: 569 DLRVGLDLRNEKITYKIREHSLQKLPYILVAGDK 602 >gi|71894504|ref|YP_278612.1| prolyl-tRNA synthetase [Mycoplasma synoviae 53] gi|114152218|sp|Q4A5S0|SYP_MYCS5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71851292|gb|AAZ43901.1| prolyl-tRNA synthetase [Mycoplasma synoviae 53] Length = 482 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 5/158 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G K+S P +FK + ++ +V S+G+ + R++ A+I D +G+ Sbjct: 221 GKALQTGTSHYLGQKFSRPYGISFKNKNNEEDFVYQTSWGV-STRLLGAIIMVHGDNRGV 279 Query: 339 IWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 I P +AP K+ ++ I A + +V + A KIY LSK V D + G + + ++ Sbjct: 280 IIPPKIAPIKVDILEILADKNPEVSKVA-NKIYKELSK-KLSVRLDASNKSPGFKASQSE 337 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G PL++ VG + + ++ V R T + + LE V Sbjct: 338 IEGVPLRIEVGPRDLENNCVTFVRRDTLEKTKVDLENV 375 Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust. Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 10/158 (6%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSY 89 M + +KG + P +N+ + E + G + P L+ +E + Sbjct: 28 MNYGPAKGTIIYKPNSYGIWENIQKTLNEVFKKHGVENIYAPLFIPESLFKIEKEHVQGF 87 Query: 90 GKEMLRLADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDEL 143 E+ + +K + I PT E + ++F+ I SY +LP + Q +++ Sbjct: 88 NPELATVTQVGNKKLSEKLIVRPTSEVIFANLFKEDINSYNDLPKIYNQWANVVRWEKVT 147 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +P +R+REFL ++ ++ + E ++ KM Y Sbjct: 148 KP---FLRTREFLWQEGHTSHSSAEEARSFTVKMIKEY 182 >gi|149371736|ref|ZP_01891152.1| threonine--tRNA ligase (threonine tRNA synthetase) [unidentified eubacterium SCB49] gi|149355363|gb|EDM43923.1| threonine--tRNA ligase (threonine tRNA synthetase) [unidentified eubacterium SCB49] Length = 647 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 98/450 (21%), Positives = 181/450 (40%), Gaps = 57/450 (12%) Query: 2 RRSKYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L +L+E RD +L L T + +G+ WLP G + + +++ Sbjct: 226 KELKEYLALLEEAKKRDHRKLGKELELFT-FSQKVGQGLPLWLPKGAALRERLENFLKKA 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR-ND-KAMIYGPTHEEVMTDIF 118 Q + G + P + + +L+V SG + YG++ ++ + ND + + P + +I+ Sbjct: 285 QKKAGYEMVVTPHIGNKELYVTSGHFAKYGEDSFQVINTPNDGEEFMLKPMNCPHHCEIY 344 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + SY++LP + +R E G+ R R F DA+ F TP+ + K+ Sbjct: 345 NAKPMSYKDLPKRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CTPDQLDEEFKKV 403 Query: 178 FVSYLRIFHRLGLK----SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 L +F LG + + +R S P ++I T E Sbjct: 404 IDLVLYVFGSLGFEKFTTQVSIRDMSKP------EKYIGDVSTWEK-------------- 443 Query: 234 SENTDFDDI--ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 +EN + + L+ IVE+ A + D + K R ++G I Sbjct: 444 AENAILNAVKDKGLDYIVEEGEAAFYGPK-------LDFMV--KDALGRSWQLGTI---Q 491 Query: 292 TKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIW--PDSVAP 346 Y+LP T+KG+D + H V + G++ A++ G +W P+ VA Sbjct: 492 VDYNLPERFELTYKGSDNELHRPVMIHRAPFGSLERFVAILLEHTGGNFPLWLMPEQVAI 551 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 +S + + EK+ L D+ E IG + A++ P +I+ Sbjct: 552 LSLS--------EKYEEYAEKVLNLLENHDIRALVDNRNETIGKKIREAEMNKIPYMLIL 603 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G + +D + ++ G M++E N Sbjct: 604 GEQEENDGTISVRKHSEGDLGTMTVEAFGN 633 >gi|326404590|ref|YP_004284672.1| threonyl-tRNA synthetase [Acidiphilium multivorum AIU301] gi|325051452|dbj|BAJ81790.1| threonyl-tRNA synthetase [Acidiphilium multivorum AIU301] Length = 640 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 95/429 (22%), Positives = 160/429 (37%), Gaps = 49/429 (11%) Query: 17 DAEIASHKLMLRT-GMIHQHSKGIYS--WLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + R + H + + S W G + V A +R Q G IE+ P Sbjct: 238 EAERRDHRKIGRQMDLFHMQEEAVGSVFWHEKGWRLYRTVEAYMRRRQEEFGYIEVRTPQ 297 Query: 74 LQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 L LW SG +D+Y M + + DK + P + IF ++SYR LP Sbjct: 298 LLDRKLWEASGHWDNYRSHMFIAEVEDEDKVLAVKPMNCPCHVQIFNHGLRSYRELPLRM 357 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGL 190 + R E G+MR R F DA+ F E FV L R++ G Sbjct: 358 AEFGACHRYEPSGALHGIMRVRAFAQDDAHIF--CTEDQIADETVRFVEMLRRVYADFGF 415 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI-PSENTDFD---DIISLN 246 ++ P S E A+ + C + F + P E + + + + Sbjct: 416 PEFAVKFADRPTPRSGSDEVWDKAEAA-LRSACETAGVTFTVNPGEGAFYGPKLEFVLRD 474 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 +I W V E+L S + AR + + Sbjct: 475 AIGRDWQCGTLQVDFVLPERLDASYVTAESGRARPVML---------------------- 512 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 H +GS+ R + +IE+ G+ +W +AP + ++ +I D E Sbjct: 513 ---HRAIVGSF----ERFIGILIENCA-GRFPLW---LAPTQAAVASIVTD---ANDYAE 558 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + A+L + G V D E+I ++ L P ++VG + V I+ + + Sbjct: 559 TVAAKLKEAGLAVATDTRNEKINAKVRDLSLALVPNILVVGRREAEQQTVSIRRLGSDKQ 618 Query: 427 EDMSLEEVI 435 + M+L+E + Sbjct: 619 DSMTLDEAV 627 >gi|224499783|ref|ZP_03668132.1| threonyl-tRNA synthetase [Listeria monocytogenes Finland 1988] Length = 640 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 93/436 (21%), Positives = 182/436 (41%), Gaps = 38/436 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K F+ + +E RD +L L T I + +G+ WLP G + I +++ R Sbjct: 228 KEFIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEER 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I Sbjct: 287 LGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ + R E+ G+ R R + DA+ F + P+ K + ++ L Sbjct: 347 SYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVF-VRPDQIKDEFKRVVELIL 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + R LS+ D T+ + D M + D Sbjct: 406 EVYKDFDITDYSFR---------LSYR-----DPKNTEKYFDDDAMWEKAQAMLKSAMDE 451 Query: 243 ISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + ++ E A Y DV ++ ++ + + +S ++ F ++ L T Sbjct: 452 MEMDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----T 500 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG+ H + G+ + R VA +IE KG +P +AP ++ +I + A Sbjct: 501 YIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY---KG-AFPTWLAPVQMEIIPVNADAH 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + D + + +L + G DD E++G + A P +++G + V V ++ Sbjct: 557 L--DYAKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVR 614 Query: 420 HRLTGIREDMSLEEVI 435 + E M L+ I Sbjct: 615 RYGSKDSETMDLDAFI 630 >gi|281203096|gb|EFA77297.1| threonyl-tRNA synthetase [Polysphondylium pallidum PN500] Length = 716 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 3/137 (2%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H +S G +LP G + + + IR E +R G E+ PT+ S LW ESG + YG+ Sbjct: 337 HPYSPGCAFFLPHGTRIYNRLVEFIRHEYHRRGFTEVITPTMFSQQLWEESGHWAKYGEN 396 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M L +D+ P + +F + +SYR LP F + R+EL G+ R Sbjct: 397 MFNLK-CDDQNYSLKPMNCPSHCLMFGNRSRSYRELPIRFADFGVLHRNELAGALTGLTR 455 Query: 152 SREFLMKDAYSFDLTPE 168 R+F DA+ F TP+ Sbjct: 456 VRKFQQDDAHIF-CTPD 471 >gi|296332117|ref|ZP_06874581.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675488|ref|YP_003867160.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150888|gb|EFG91773.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413732|gb|ADM38851.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 643 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 92/406 (22%), Positives = 166/406 (40%), Gaps = 36/406 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S +L+ SG +D Y + M Sbjct: 264 QGLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTPVLGSKELYETSGHWDHYQEGMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I++ I SYR LP ++ R E+ G+ R R Sbjct: 324 MEMDNETLVLRPMNCPHHMMIYKQDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + + ++ GL R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKDEFIRTVRLIQDVYEDFGLSDYTFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M S + D I + E A Y DV ++ ++ + Sbjct: 429 PEDTEKYFDDDEMWNKAQSMLKEAMDEIGHDYYEAEGEAAFYGPKLDV---QVKTAIGKE 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPERFDL----TYIGEDGKQHRPVVIHRGVVSTMERFVAFLIE-E 536 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 H G W +AP + +I + V D +K+ RL + G V D E+IG + Sbjct: 537 HKGALPTW---LAPVQFQVIPVSP--SVHLDYAKKVQERLQREGLRVEVDSRDEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A + P ++VG + + V ++ E +SL++ + A Sbjct: 592 REAQMQKIPYMLVVGDQEAENGAVNVRKYGEQNSETISLDDFVKKA 637 >gi|150866378|ref|XP_001385956.2| proline-tRNA ligase [Scheffersomyces stipitis CBS 6054] gi|149387634|gb|ABN67927.2| proline-tRNA ligase [Scheffersomyces stipitis CBS 6054] Length = 682 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 78/346 (22%), Positives = 135/346 (39%), Gaps = 72/346 (20%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 278 DEHIAIRPTSETVMYPYYSKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEG 337 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ LT E + +++ Y RI+ L ++P +V E + Sbjct: 338 HTAHLTKEEAAKEVDEILDLYARIYEEL--LAVP----------------VVKGKKTENE 379 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F D+ + VE + A + R Sbjct: 380 KFAGGDY------------------TTTVEGFIA----------------------ATGR 399 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKG 337 GI+ + GT +S + + + DG D + S+G+ + RV+ ++ + D KG Sbjct: 400 GIQGATSHHLGTNFSKMFNISVENPDGADKPRVFAFQNSWGL-STRVIGVMVMTHSDNKG 458 Query: 338 IIWPDSVAPFKISLINI----KAHDQ---VCRDACEKIYARLSKVGCDVFWD--DMGEQI 388 ++ P VA + +I + K D+ D I ARL V D D+ Sbjct: 459 LVLPPRVAQTQAVVIPVGLTSKTTDEQRKAINDGAADIEARLKAVDVRAIGDYRDIYTP- 517 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +FA +L G PL++ G K +S + + R G + + L E+ Sbjct: 518 GWKFAEWELKGVPLRIEFGPKDLSSEQATVVRRDNGAKYTVKLAEL 563 >gi|315222497|ref|ZP_07864386.1| threonyl-tRNA synthetase [Streptococcus anginosus F0211] gi|315188183|gb|EFU21909.1| threonyl-tRNA synthetase [Streptococcus anginosus F0211] Length = 650 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 166/411 (40%), Gaps = 47/411 (11%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G V I + + G + P L S DL+ SG ++ Y ++M Sbjct: 261 QGLPFWLPDGATIRRIVERYITDREVNDGYQHVYTPPLASVDLYKTSGHWEHYQEDMFPP 320 Query: 97 ADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D D + + P + +++++H+ SYR LP ++ + R E G+ R RE Sbjct: 321 MDMGDGEQFVLRPMNCPHHIEVYKNHVHSYRELPIRIAELGMMHRFEKSGALSGLQRVRE 380 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + D++ F + PE + + + + ++ + R + Sbjct: 381 MTLNDSHLF-VMPEQIQEEFKHVLDLMIDVYKDFNITDYRFR--------------LSYR 425 Query: 215 DTGETQVFCSKDFMDFPIPSENTD------FDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 D + + D M EN DD+ E A Y DV ++ Sbjct: 426 DPNDKHKYFDNDEM-----WENAQRMLKGAMDDLGLDYFEAEGEAAFYGPKLDV---QVK 477 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVA 326 +L + +S ++ F ++ L + GADG++H M GI + R +A Sbjct: 478 TALGNEETLSTIQLD----FLLPERFDL----HYIGADGEEHRPVMIHRGIVSTMERFIA 529 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 +IE+ KG +P +AP ++++I I ++ D K+ L G V D+ E Sbjct: 530 YLIETY---KG-AFPTWLAPHQVTVIPIS--NEAHADYAWKVAKELRNRGVRVDVDERNE 583 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ + + P Q+IVG K +D V ++ + ++ E +N+ Sbjct: 584 KMQYKIRQSQTHKVPYQLIVGDKEQADGTVNVRRYGSKQTHTETVAEFVNH 634 >gi|303233025|ref|ZP_07319704.1| threonine--tRNA ligase [Atopobium vaginae PB189-T1-4] gi|302480896|gb|EFL43977.1| threonine--tRNA ligase [Atopobium vaginae PB189-T1-4] Length = 589 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 90/402 (22%), Positives = 160/402 (39%), Gaps = 56/402 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+++ G WLP G + + + +E Q++ G ++ P + S LW SG +D Y Sbjct: 207 MLNEAGPGFPFWLPNGMRIRNELMKYWQEMQDQYGYEQIQTPIILSRKLWETSGHWDHY- 265 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +D+ P + ++ S +SYR+LP + L R EL+ G+ Sbjct: 266 KENMYTTVIDDEDFAIKPMNCPGACLVYMSKPRSYRDLPLKLAEAGLDHRHELKGTLHGL 325 Query: 150 MRSREFLMKDAYSFDLTPE---GSKHSYNKMFVSYLRIFHRLGLKSIPMRAE--SGPIGG 204 R REF DA+ F + P+ ++ +Y + F P + E + P Sbjct: 326 FRVREFTQDDAHLF-IRPDQICDEVREVTELISAYYKQF------GFPYKVELSTRPENS 378 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 S E A+ G + +D+ I + F Y D H Sbjct: 379 MGSDEDWATAEAGLRDALETMG-LDYTINEGDGAF----------------YGPKIDFH- 420 Query: 265 EKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIG 320 L D L R + G I F F ++L + +DG K + + G G Sbjct: 421 --LKDCL-------GRTWQCGTIQLDFQFPHNFNL----EYVDSDGQKKRPIMIHRAGFG 467 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + ++ ++GK +W +AP ++ ++ + + RD ++ +L K+ V Sbjct: 468 SFERFIGMLIEQYEGKFPVW---LAPLQVKVLPVS---EKTRDYARELTQKLLKLKIRVK 521 Query: 381 WDDMGEQIGSQFAVADLLG-FPLQVIVGSKFVSDSKVEIKHR 421 DD E+IG + A + P +IVG + + ++ R Sbjct: 522 LDDRDEKIGYKIREARSIDRVPYMLIVGEQEAQAGNISVRDR 563 >gi|255523430|ref|ZP_05390399.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296184712|ref|ZP_06853123.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|255512888|gb|EET89159.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296050494|gb|EFG89917.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 478 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 2/145 (1%) Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 FGT ++ + + +GK YV S+GI R++ A+I D G+ P +AP ++ Sbjct: 236 FGTNFAEAFNMQYTDKNGKLQYVHQTSWGI-TTRLIGAIIMVHGDDSGLKLPPRIAPIQV 294 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 ++ I H + + ++ AR+SK+ V DD + G +FA ++ G P+++ VG K Sbjct: 295 VIVPIAQHKEGVLEKAAELKARISKIA-RVKVDDSDKMPGWKFAEYEMKGVPIRLEVGPK 353 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEV 434 + ++V + R G + +S++E+ Sbjct: 354 DIEKNQVVLVRRDNGEKISVSMDEI 378 >gi|302871393|ref|YP_003840029.1| threonyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302574252|gb|ADL42043.1| threonyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 639 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 97/416 (23%), Positives = 161/416 (38%), Gaps = 47/416 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I G +LP G + + REE R G E+ P + + DLW++SG +D Y K Sbjct: 258 IFDEGPGFPFFLPKGMIIRNILEDFWREEHKRRGYQEIKTPIMLTKDLWIQSGHWDHY-K 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D+ P + +++ SYR LP ++ L R EL G+M Sbjct: 317 ENMYFTKIDDQEFAIKPMNCPGSILVYKRKSHSYRELPQRLCELGLVHRHELSGVLHGLM 376 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLS 207 R R F DA+ F + P K + + G K + R E+ +G D Sbjct: 377 RVRCFTQDDAHIF-MLPSQIKDEIKGVIDLIDYFYSVFGFKYHVELSTRPENS-MGTD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN-SIVEQWTAPYAATSDVHNEK 266 E +A+T + + + +N I E A Y D H E Sbjct: 433 -EQWNMAETALKEAL------------------EEVGINYKINEGDGAFYGPKIDFHLE- 472 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVV 325 DSL + + ++ F ++ L + G DG H V + G++ Sbjct: 473 --DSLKRTWQCATIQLD----FQMPERFDL----YYIGEDGAKHRPVMLHRVVFGSIERF 522 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A++ G +W +AP +I +I + + D KI L + G V D Sbjct: 523 IAILTEHFAGAFPVW---LAPTQIRVIPVSDN---FNDYAAKISQTLKENGFRVEEDYRS 576 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 E +G + A L P VIVG K ++ + ++ R G +++E ++ + Sbjct: 577 ETVGYKIRDAQLQKIPYMVIVGEKEQKENTIAVRDRKKGDLGSFTIDEFVSMVKEK 632 >gi|16803599|ref|NP_465084.1| threonyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|224501501|ref|ZP_03669808.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|22654119|sp|Q8Y6X2|SYT_LISMO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|16410988|emb|CAC99637.1| threonyl-tRNA synthetase [Listeria monocytogenes EGD-e] Length = 640 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 93/436 (21%), Positives = 182/436 (41%), Gaps = 38/436 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K F+ + +E RD +L L T I + +G+ WLP G + I +++ R Sbjct: 228 KEFIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEER 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I Sbjct: 287 LGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ + R E+ G+ R R + DA+ F + P+ K + ++ L Sbjct: 347 SYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVF-VRPDQIKDEFKRVVELIL 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + R LS+ D T+ + D M + D Sbjct: 406 EVYKDFDITDYSFR---------LSYR-----DPKNTEKYFDDDAMWEKAQAMLKSAMDE 451 Query: 243 ISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + ++ E A Y DV ++ ++ + + +S ++ F ++ L T Sbjct: 452 MEMDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFDL----T 500 Query: 302 FKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG+ H + G+ + R VA +IE KG +P +AP ++ +I + A Sbjct: 501 YIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEY---KG-AFPTWLAPVQMEIIPVNADAH 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + D + + +L + G DD E++G + A P +++G + V V ++ Sbjct: 557 L--DYAKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVR 614 Query: 420 HRLTGIREDMSLEEVI 435 + E M L+ I Sbjct: 615 RYGSKDSETMDLDAFI 630 >gi|89094703|ref|ZP_01167639.1| threonyl-tRNA synthetase [Oceanospirillum sp. MED92] gi|89081049|gb|EAR60285.1| threonyl-tRNA synthetase [Oceanospirillum sp. MED92] Length = 639 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 88/424 (20%), Positives = 155/424 (36%), Gaps = 72/424 (16%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R++ +E+ P + LW +SG ++ + + Sbjct: 255 LQEEAPGMVFWHPKGWALYQGIEQYMRQKLRPRKYVEVKTPQVVERTLWEKSGHWEKFSE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 EM N + P + ++ I+SYR+LP + R+E G+M Sbjct: 315 EMFTTHSEN-RDFAVKPMNCPCHVQVYNQGIRSYRDLPLRMAEFGSCHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGDL 206 R R F+ D + F E S S F+ +L ++ G + I + + P +G D Sbjct: 374 RVRGFVQDDGHIF--CAEDSIQSEVSEFIDFLHEVYADFGFQEIQYKLSTRPEKRVGSD- 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD-VHNE 265 E W A +D + N Sbjct: 431 -------------------------------------------EVWDKSEKALADALDNA 447 Query: 266 KL-FDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYV 312 L +D LP IE +G ++ GT +S+P + A F G ++ V Sbjct: 448 GLKWDLLPGEGAFYGPKIEFSLKDCLGRVWQCGTVQVDFSMPGRLGAQFVNEQGERETPV 507 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 + +G+ ++ ++ G W +AP + ++NI D CEK+ L Sbjct: 508 MIHRAILGSFERFIGILIENYAGALPTW---LAPVQAVVMNITDKQA---DYCEKVVQNL 561 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G D E+IG + L P +++G K V V ++ R M L+ Sbjct: 562 ENKGFRAESDLRNEKIGFKIRERTLQKVPYLLVIGDKEVEAGAVAVRTRTGEDLGSMPLD 621 Query: 433 EVIN 436 E +N Sbjct: 622 EFVN 625 >gi|154706797|ref|YP_001424763.1| threonyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] gi|154356083|gb|ABS77545.1| threonyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] Length = 660 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 104/440 (23%), Positives = 167/440 (37%), Gaps = 77/440 (17%) Query: 17 DAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+L+ + + H S G W P G + + IR ++ G E+ P Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 L A LW +SG +G ++ L + +I P IF +KSYR+LP + Sbjct: 306 LIDASLWDKSGHLGKFGDDIFSLPLEPQQYVI-KPMSCPAHVQIFNQGVKSYRDLPLRYA 364 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F+ DA+ F E S F+ L Sbjct: 365 EFGACHRNEPSGTLHGLMRLRGFVQDDAHIF--CTEDQIQSEVSAFIDQL---------- 412 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 HE V AD G T+V P + D++ W Sbjct: 413 ---------------HE--VYADFGFTEVIHKLSTR----PEKRVGSDEV---------W 442 Query: 253 TAPYAATSDVHNEK--LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MS 299 T A ++ N K +D LP IE +G I+ GT +S+P + Sbjct: 443 TKAEQALAEALNRKGVEWDILPGEGAFYGPKIEFSLRDCLGRIWQCGTVQVDFSVPERLG 502 Query: 300 ATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 A + DG H +GS+ R + ++E S GK +W +AP ++ ++N Sbjct: 503 AHYIAEDGSKKPPVMIHRAILGSF----ERFLGILLEESA-GKLPLW---LAPVQVVVMN 554 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I D + L +G D E+IG + + P V++G + V+D Sbjct: 555 ITDRQA---DYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVAD 611 Query: 414 SKVEIKHRLTGIREDMSLEE 433 + ++ ++LEE Sbjct: 612 KTLSVRALEDEASTTITLEE 631 >gi|330443967|ref|YP_004376953.1| threonyl-tRNA synthetase [Chlamydophila pecorum E58] gi|328807077|gb|AEB41250.1| threonyl-tRNA synthetase [Chlamydophila pecorum E58] Length = 635 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 98/445 (22%), Positives = 173/445 (38%), Gaps = 53/445 (11%) Query: 1 MRRSKYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 M+ K L L+E RD + KL L + +++ G+ + P G D + +E Sbjct: 220 MQELKEHLHQLEEAKKRDHRVLGVKLDLFSQ--QEYAAGMPFFHPRGMIIWDALINFWKE 277 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIF 118 R G ++ P L + LW SG + +Y + M L D + A+ P + + Sbjct: 278 LHARAGYQQIKTPQLMNQRLWEISGHWQNYKENMYTLTLDEENYAI--KPMNCPGCMLYY 335 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++H+ SY+ P +I R E+ G+MR R F DA+ F LTPE + + Sbjct: 336 KTHLHSYKEFPLRVAEIGHVHRHEVSGALSGLMRVRAFHQDDAHVF-LTPEQVEEETLNI 394 Query: 178 FVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 +++H GL + R ++G IG D E T Q K F I Sbjct: 395 LDLVAKLYHTFGLAYHLELSTRPKTGTIGSDELWEHA----TSALQRALEKSGSSFIITP 450 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFG 291 E F Y D+H + + R + G I + Sbjct: 451 EEGAF----------------YGPKIDIHVKDAIN----------RTWQCGTIQLDMFLP 484 Query: 292 TKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ L + GK V + G++ ++ GK +W ++P ++ L Sbjct: 485 ERFHLEYT---NAEGGKSIPVMLHRALFGSIERFLGILIEHFKGKFPLW---ISPEQVRL 538 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 I + A + R ++ + +G V DD E + + A + V +G + V Sbjct: 539 ITV-ADRHIPR--ARELAQKWQNLGLVVTVDDASESVSKKIRNAQTMQVNYMVTLGDQEV 595 Query: 412 SDSKVEIKHRLTGIREDMSLEEVIN 436 +++ + I+ R + D+S E+ +N Sbjct: 596 ANNTLAIRTRDNRVINDVSEEKFLN 620 >gi|290580052|ref|YP_003484444.1| putative threonyl-tRNA synthetase [Streptococcus mutans NN2025] gi|254996951|dbj|BAH87552.1| putative threonyl-tRNA synthetase [Streptococcus mutans NN2025] Length = 649 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 88/395 (22%), Positives = 164/395 (41%), Gaps = 38/395 (9%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I +++ +G + P + S DL+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPDGATIRRIIERYITDKEVASGYQHVYTPPIASVDLYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D ++ + P + +++++H+ SYR LP ++ + R E Sbjct: 314 REDMFPTMDMGDGESFVLRPMNCPHHIEVYKNHVHSYRELPIRIAELGMMHRYEKSGALS 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D ++F + + + + + + ++ L R LS Sbjct: 374 GLQRVREMTLNDGHTF-VALDQVEDEFKRTLQLIIDVYEDFNLTDYSFR---------LS 423 Query: 208 HEFIVLADTGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + D +T + D M + DD+ E A Y D+ + Sbjct: 424 YR-----DPNDTHKYFDDDEMWEKSQTMLKAAMDDMGLDYYEAEGEAAFYGPKLDI---Q 475 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RV 324 + +L ++ +S ++ F ++ L T+ GADG++H M GI + R Sbjct: 476 VKTALGNDETLSTIQLD----FLLPERFEL----TYIGADGEEHRPVMIHRGIVSTMERF 527 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 A +IE+ KG +P +AP ++++I I + D ++ L G DD Sbjct: 528 TAYLIETY---KG-AFPTWLAPHQVTVIPISNEAHI--DYAWEVAKELRDHGIRADVDDR 581 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E++ + + P Q+IVG K V V ++ Sbjct: 582 NEKMQYKIRQSQTKKVPYQLIVGDKEVESGTVNVR 616 >gi|332878463|ref|ZP_08446184.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683558|gb|EGJ56434.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 647 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 92/428 (21%), Positives = 153/428 (35%), Gaps = 65/428 (15%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +++ Q R G ++ P + +L+V SG Y YGK+ + Sbjct: 261 GKGLPMWLPKGTALRLRLEDFLKKIQKRYGYQQVMTPHIGGKNLYVTSGHYAHYGKDSFQ 320 Query: 96 L--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 D+ + P + +I+ +SY++LP + +R E G+ R Sbjct: 321 PIHTPEADEEYMLKPMNCPHHCEIYAWKPRSYKDLPLRIAEFGTVYRYEQSGELHGLTRV 380 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K + ++ IF G + D I Sbjct: 381 RSFTQDDAHIF-CRPDQVKDEFIRVMEIIQIIF--------------GALNFDTFEAQIS 425 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 L D + + D E W A + EK ++ Sbjct: 426 LRDPNNREKYIGSD-----------------------EVWEEAENAIIEACKEKGLNAKV 462 Query: 273 ENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYG 318 E + G + +G + GT Y+LP + G D + H V + Sbjct: 463 EYGEAAFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFKLEYTGEDNQKHRPVMIHRAP 522 Query: 319 IGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G+M AV+ G +W PD VA IS + D +K+ A + Sbjct: 523 FGSMERFCAVLIEHTAGHFPLWLTPDQVAILPIS--------EKFNDYAQKLCAYFDEQD 574 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DD E+IG + ++ P +IVG K +D V ++ + G + M E+ Sbjct: 575 VRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAADGTVSVRKQGEGDQGSMKFEDFAK 634 Query: 437 YASHRFSN 444 + N Sbjct: 635 KINEEVRN 642 >gi|327313290|ref|YP_004328727.1| proline--tRNA ligase [Prevotella denticola F0289] gi|326944871|gb|AEA20756.1| proline--tRNA ligase [Prevotella denticola F0289] Length = 493 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 87/161 (54%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ T+ D K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTYLNKDNKPEYVWATSWGV-STRLIGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYA---RLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++++I I ++ ++ K+ +L ++G V +DD ++ G +FA Sbjct: 295 VLPPRIAPIQVAIIPIFKGEEQLKEITAKLQPVIDQLRELGITVKYDDSDNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++ +G + + D+ +E+ R T +E++S + ++ Sbjct: 355 YELKGVPVRLAMGGRDLQDNTIEVMRRDTLEKENVSFDGIV 395 >gi|167040680|ref|YP_001663665.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|307724045|ref|YP_003903796.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|166854920|gb|ABY93329.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|307581106|gb|ADN54505.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X513] Length = 634 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 96/413 (23%), Positives = 160/413 (38%), Gaps = 51/413 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH G + P G + + R+E + G E+ P + + +LW SG +D Y K Sbjct: 254 IHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEELWRRSGHWDHY-K 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + +++S + SYR+LP ++ L R EL G+M Sbjct: 313 ENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVHRHELSGVLHGLM 372 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKM--FVSYL-RIFHRLGLKSIPMRAESGPIGGDLS 207 R R F DA+ F +TPE + + V Y +IF + R E+ +G D Sbjct: 373 RVRSFTQDDAHLF-MTPEQVEDEILGVINLVDYFYKIFGFEYFVELSTRPENS-MGSDED 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A + + + ++ P D A Y D H L Sbjct: 431 WELATNA------LISALNRVNLPYKVNEGD--------------GAFYGPKIDFH---L 467 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMR 323 DS+ R + G I F ++ L + G DG+ H + + G++ Sbjct: 468 KDSI-------GRTWQCGTIQLDFQMPERFEL----EYIGPDGEKHRPIMLHRVIYGSIE 516 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +P +AP ++ ++ I + +Y RL + DD Sbjct: 517 RFIGILTEHFAGA---FPTWLAPVQVRVLPISDKHYAY---AQNVYGRLLENDIRAELDD 570 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E++G + A L P +IVG K V V ++ R G +SL E I Sbjct: 571 RNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIE 623 >gi|73981325|ref|XP_850160.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 2 [Canis familiaris] Length = 721 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 107/435 (24%), Positives = 176/435 (40%), Gaps = 74/435 (17%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E R G E+ PT Sbjct: 299 EAELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYTRRGFSEVKTPT 358 Query: 74 LQSADLWVESGRYDSYGKEMLRL----ADR------------NDKAMIYGPTHEEVMTDI 117 L SA LW SG ++ Y ++M L +DR + + P + + Sbjct: 359 LFSAKLWELSGHWEHYQEDMFVLQPPGSDRLASSLSVCSTSHSTDTLALKPMNCPAHCLM 418 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHS--- 173 F +S+R LP + R E G+ R R F DA+ F P+ + Sbjct: 419 FAHRPRSWRELPLRLADFGVLHRAEASGSLGGLTRLRCFQQDDAHIF-CAPDQLEEEIQG 477 Query: 174 ---YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + + + L RL L + P SG +G L D E QV + +F Sbjct: 478 CLDFLRSVYAVLGFSFRLALSTRP----SGFLGES------CLWDQAE-QVL-QRALEEF 525 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 P + D A Y DVH L D+L R + G I Sbjct: 526 GEPWDLKPGDG------------AFYGPKIDVH---LHDAL-------GRPHQCGTI--- 560 Query: 291 GTKYSLPM--SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + LP+ +KG G + V + +G++ + V+ S+ GK WP ++PF Sbjct: 561 QLDFQLPLRFDLQYKGQAGVLERPVLIHRAVLGSVERMLGVLAESYGGK---WPLWLSPF 617 Query: 348 KISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 ++ +I + A ++ R+A +++ A + + CD+ D G + + A L + Q +V Sbjct: 618 QVVVIPVGAEQEEYAREAQQRLQA--AGLVCDLD-ADSGLTLSRRVRRAQLAHYNFQFVV 674 Query: 407 GSKFVSDSKVEIKHR 421 G K S V I+ R Sbjct: 675 GQKEQSKKTVNIRTR 689 >gi|291564005|emb|CBL42821.1| prolyl-tRNA synthetase, family I [butyrate-producing bacterium SS3/4] Length = 477 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 72/330 (21%), Positives = 133/330 (40%), Gaps = 69/330 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + D ++ I SYR+LP + Q +++ RP +RSREFL ++ ++ Sbjct: 114 PTSETLFCDFYQKDIHSYRDLPKVYNQWCSVVRWEKTTRP---FLRSREFLWQEGHTAHA 170 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 T E ++ +M Y AD FC + Sbjct: 171 TAEEAQERTIQMLNLY--------------------------------AD------FC-E 191 Query: 226 DFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 DF+ P+ + TD + A Y S +H+ K S Sbjct: 192 DFLAIPVVRGQKTDKEKFAGAE-------ATYTIESLMHDGKALQS-------------- 230 Query: 285 GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 G FG ++ + D + YV S+G+ R++ A+I D +G++ P +V Sbjct: 231 GTSHNFGDGFAKAFGIQYSDKDNQLKYVHQTSWGM-TTRMIGAIIMVHGDNEGLVLPPNV 289 Query: 345 APFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 AP ++ ++ I+ + + ++ LS V DD + G +F+ +++ G P++V Sbjct: 290 APTQVVIVPIRQQQEGVLEKAREVEEVLSNFRVKV--DDSDKSPGWKFSESEMRGIPVRV 347 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G K + + + R T + ++L E+ Sbjct: 348 ELGPKDIEAGQAVLVRRDTHEKITVALSEI 377 >gi|282877938|ref|ZP_06286747.1| proline--tRNA ligase [Prevotella buccalis ATCC 35310] gi|281299939|gb|EFA92299.1| proline--tRNA ligase [Prevotella buccalis ATCC 35310] Length = 493 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 46/198 (23%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 249 VEQWTA-PYAATSDVHNEKLFDSLP----ENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 EQW A P E+ +L E + ++ G + G ++ T+ Sbjct: 201 AEQWMAVPVVQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAKSFDVTYL 260 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K YV S+G+ + R++ A+I + D G++ P +AP ++ +I I +++ + Sbjct: 261 NKENKPEYVWATSWGV-STRLIGALIMTHSDDNGLVLPPKLAPIQVVIIPIAKNEEQLKA 319 Query: 364 ACEKIYA---RLSKVGCDVFWDDMG-EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +K+ L K+G V +DD ++ G +FA +L G P+++++G + + ++ +E+ Sbjct: 320 IADKLNPFMDDLKKLGITVKYDDSNNKRPGFKFADYELKGVPVRLVMGGRDLENNTIEVM 379 Query: 420 HRLTGIREDMSLEEVINY 437 R T +E + +E + +Y Sbjct: 380 RRDTLEKETIPVEGLADY 397 Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+S+R+LP Q R E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSWRDLPLMCNQWCNVMRWEMRTR-PFLRTSEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSY 181 ++ ++ T E ++ KM Y Sbjct: 173 WQEGHTAHATREEAEEEAQKMLKVY 197 >gi|99035129|ref|ZP_01314912.1| hypothetical protein Wendoof_01000242 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 536 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 91/412 (22%), Positives = 161/412 (39%), Gaps = 51/412 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G W G + + + IR++ G E+ P L S +LW SG +D + + Sbjct: 156 IQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWERSGHWDKFRE 215 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + +K + P + IF SH +SYR+LP + R+E G+M Sbjct: 216 NMFIVDESENKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLM 275 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGGDLSHE 209 R R F DA+ F + E +S F L+ ++ LG I ++ P D+ Sbjct: 276 RVRGFTQDDAHIFCM--EEQVNSETIKFCDLLKEVYSELGFNEISVKFSDRP---DIRAG 330 Query: 210 FIVLADTGETQVF--CSKDFMDFPI-PSENTDFD---DIISLNSIVEQWTAPYAATSDVH 263 + D E + + + + + P E + + + ++I W + Sbjct: 331 NDEVWDRAEKALLEAVKEAGLSYKLNPGEGAFYGPKLEFVLKDAIGRNWQCGTLQVDFI- 389 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAM 322 LPE R+ A FY G ADG K H V + +G Sbjct: 390 -------LPE--RLGA--------FYIG-------------ADGHKHHPVMLHRAILGTF 419 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ ++ GK +W +AP +++++ I +I L + G V D Sbjct: 420 ERFIGILIENYAGKFPVW---LAPTQLAILTITNE---ADGYATEISNILKEQGVRVKTD 473 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 E+I + + P+ IVG V+ V +++ + +E SLE+ Sbjct: 474 LTNEKISYKIRLHSSNKVPILWIVGKNEVTSKTVSVRNLGSERQESFSLEKA 525 >gi|326802012|ref|YP_004319831.1| prolyl-tRNA synthetase [Sphingobacterium sp. 21] gi|326552776|gb|ADZ81161.1| Prolyl-tRNA synthetase [Sphingobacterium sp. 21] Length = 490 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 10/192 (5%) Query: 247 SIVEQWTA-PYAATSDVHNEKLFDSLP----ENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E+W A P NE+ +L E + ++ G + G ++ Sbjct: 195 TFAEEWMALPVVRGRKTENERFAGALDTYCIEALMQDGKALQAGTSHFLGQNFAKAFDVK 254 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 F +GK YV S+G+ + R++ A+I + D G++ P +AP ++ ++ I ++ Sbjct: 255 FTSKEGKLDYVWATSWGV-STRLMGALIMAHSDDAGLVLPPKLAPIQVVIVPIYKTEEES 313 Query: 362 RDA---CEKIYARLSKVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 R + + A+L + G V +DD Q G +FA +L G P++V +G++ + + VE Sbjct: 314 RQIGALADNLIAQLKQKGISVKYDDRDTQRPGFKFAEWELKGVPVRVAIGARDLQNGTVE 373 Query: 418 IKHRLTGIREDM 429 + R T +E + Sbjct: 374 LARRDTQSKETV 385 Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Query: 85 RYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 + D G+ ++ + ++ +I PT E ++ + ++ I+SYR+LP Q R E+R Sbjct: 98 KNDGNGQIIVDEEAKLEEELIVRPTSETIIWNTYKGWIQSYRDLPILVNQWANVVRWEMR 157 Query: 145 PRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 R +R+ EFL ++ ++ T E + +M Y Sbjct: 158 TRL-FLRTAEFLWQEGHTAHATSEEAVKETERMLNVY 193 >gi|163788630|ref|ZP_02183075.1| N-acetylmuramic acid-6-phosphate etherase [Flavobacteriales bacterium ALC-1] gi|159875867|gb|EDP69926.1| N-acetylmuramic acid-6-phosphate etherase [Flavobacteriales bacterium ALC-1] Length = 646 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 96/460 (20%), Positives = 172/460 (37%), Gaps = 69/460 (15%) Query: 15 PRDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIR 58 P+ E+ H +L H K G+ WLP G + + ++ Sbjct: 222 PKQKELTEHLHLLEEAKKRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRERLENFLK 281 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTD 116 Q + G + P + +L+V SG Y YG++ + + D+ + P + + Sbjct: 282 AAQKKAGYEMVVTPHIGQKELYVTSGHYAKYGEDSFQPIKTPKEDEEFLLKPMNCPHHCE 341 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+ + SY+ LP F + +R E G+ R R F DA+ F TP+ + Sbjct: 342 IYNNKPYSYKELPKRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CTPDQLDAEFK 400 Query: 176 KMFVSYLRIFHRLGLK----SIPMRAESGPIG--GDLSHEFIVLADTGETQVFCSKDFMD 229 ++ L +F LG + + +R P GD H E + Sbjct: 401 EVIDLVLYVFGSLGFEDFTAQVSLRDPESPDKYIGDEEH-----WKKAEDAIL------- 448 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAP-YAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 N D LN +VE A Y D + D+L R ++G I Sbjct: 449 ------NAAIDK--GLNYVVETGEAAFYGPKLDF---MVRDAL-------GRQWQLGTI- 489 Query: 289 YFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 Y+LP T+KG+D + H V + G+M A++ G +W + Sbjct: 490 --QVDYTLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFIAILLEHTGGNFPLW---LM 544 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P + +I+I + EK+ L D+ E +G + A++ FP +I Sbjct: 545 PEQAIIISIS---EKYEKYAEKVLNLLENDEIRALADNRNETVGKKIREAEMQKFPFMII 601 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 VG + D+ + ++ +++++ +N R + + Sbjct: 602 VGEQEAQDNTITVRQHGGEDLGTITVKDFVNIVKDRINKS 641 >gi|88657649|ref|YP_506841.1| threonyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] gi|123750088|sp|Q2GI92|SYT_EHRCR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|88599106|gb|ABD44575.1| threonyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] Length = 633 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 101/445 (22%), Positives = 173/445 (38%), Gaps = 55/445 (12%) Query: 3 RSKYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 R++ L + N +AE H+ + L I + G W G + IR+ Sbjct: 223 RNEEELKLYLNNLIEAEKRDHRKIGRELELFHIQNEACGQIFWHTKGWTIYRIIENYIRK 282 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 + G IE+ P L + +LW +SG +D + + M L++ DK + P + IF Sbjct: 283 KLENNGYIEVKTPILLNKELWEKSGHWDKFRENMF-LSEAEDKTLAIKPMNCPCHIQIFN 341 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S I+SYR+LP + R E G+MR R F DA+ F E S F Sbjct: 342 SKIRSYRDLPIRMAEFGTCHRYEASGALHGLMRVRGFTQDDAHIF--CTESQITSEALKF 399 Query: 179 VSYL-RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PS 234 + L I+ G I ++ P S E + D E + S + + P Sbjct: 400 CNLLIEIYKDFGFTDILVKFSDRPKNRAGSDE---IWDKAEAALKKSVEVANLSYVLNPG 456 Query: 235 ENTDFDDIISL---NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 + + + ++I +W V LPE R+ A +Y G Sbjct: 457 DGAFYGPKLEFTLKDAIGREWQCGTLQMDFV--------LPE--RLGA--------YYIG 498 Query: 292 TKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 + DGK H+ V + +G ++ H GK +W +AP ++S Sbjct: 499 S-------------DGKKHHPVMLHRAILGTFERFIGILIEHHSGKFPMW---LAPIQLS 542 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 ++ I + D + KI A + ++ D E+I + P+ IVG K Sbjct: 543 ILTI-SEDSINYANSLKIKAEEHNIRVEL--DTTNEKINYKIRNHIHKKVPVFWIVGKKE 599 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVI 435 V ++ V I++ + + M +++ + Sbjct: 600 VEENSVSIRYLESNKQHVMPIDKAL 624 >gi|330994118|ref|ZP_08318046.1| Threonyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] gi|329758585|gb|EGG75101.1| Threonyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] Length = 644 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 90/418 (21%), Positives = 152/418 (36%), Gaps = 58/418 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G W P G + + +R Q+R G E+ P L LW SG +D Y + Sbjct: 256 IQEEAVGQIFWHPKGWRLYSVLQDYMRRAQDRNGYQEVRTPQLVDRALWEASGHWDKYRE 315 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + + DK + P + IFR ++SYR LP + R E G+ Sbjct: 316 HMFIATVEDEDKTLALKPMNCPCHVQIFRHGLRSYRELPLRMAEFGACHRYEPSGALHGI 375 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP---IGGD 205 MR R F DA+ F E FV L ++ LG + ++ P G D Sbjct: 376 MRVRGFTQDDAHIF--CTEDQIADETARFVRMLADVYQDLGFEHFRVKFADRPEQRAGDD 433 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDFD---DIISLNSIVEQWTAPYAAT 259 + D E + + D P E + + + ++I W Sbjct: 434 ATW------DRAENALKVACDMAGVTYEHNPGEGAFYGPKLEFVLRDAIGRDWQCGTLQV 487 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 V LPE + A++ G D H M I Sbjct: 488 DYV--------LPER-----------------------LDASYVGEDSARHRPVMLHRAI 516 Query: 320 -GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G+ ++ H G+ +W +AP ++ + +I D +++ RL G Sbjct: 517 LGSFERFLGILIEQHAGRFPLW---LAPVQVVVASIVTD---AADYAQQVADRLRAAGLV 570 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 V D E+I ++ L P+ ++VG K ++ V ++ +E + L+E ++ Sbjct: 571 VEADLRNEKINAKIREHSLARVPVILVVGRKEAEENTVAMRRLGGKAQEVLPLDEAVS 628 >gi|325854993|ref|ZP_08171709.1| proline--tRNA ligase [Prevotella denticola CRIS 18C-A] gi|325483971|gb|EGC86911.1| proline--tRNA ligase [Prevotella denticola CRIS 18C-A] Length = 493 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 87/161 (54%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ T+ D K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTYLNKDNKPEYVWATSWGV-STRLIGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++++I I ++ ++ K + +L ++G V +DD ++ G +FA Sbjct: 295 VLPPRIAPIQVAIIPIFKGEEQLKEITAKLQPVIDQLRELGITVKYDDSDNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++ +G + + D+ +E+ R T +E++S + ++ Sbjct: 355 YELKGVPVRLAMGGRDLQDNTIEVMRRDTLEKENVSFDGIV 395 >gi|297569216|ref|YP_003690560.1| threonyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] gi|296925131|gb|ADH85941.1| threonyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] Length = 646 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 84/394 (21%), Positives = 149/394 (37%), Gaps = 45/394 (11%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 Q G+ W P G + R+E R G +S P + +LW SG D YG+ M Sbjct: 260 QIGPGLILWQPKGALLRRLIEDYWRDEHYRHGYELLSTPHIARRELWQTSGHLDFYGENM 319 Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 + + P + I+++ +SYR P + ++ +R E G+MR Sbjct: 320 YSPMEVEEVQYQLKPMNCPFHIAIYKTRKRSYREFPLRWCELGTVYRFEKTGALHGLMRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHE 209 R F DA+ F P+ + ++ L I G + + P +G D + + Sbjct: 380 RGFTQDDAHIF-CRPDHLEEEIFRILDLNLHILQAFGFADYDIYLSTRPEKYVGSDENWD 438 Query: 210 FIVLADTGETQVFCSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 T Q K + + + P E + I + K+ Sbjct: 439 ----RSTAALQAALEKKGLSYSLDPGEGVFYGPKIDI--------------------KIK 474 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAA 327 D L + S ++ F ++ L + G DG++H + + +G++ Sbjct: 475 DVLGRAWQCSTIQVD----FNLPERFEL----GYTGEDGREHRPIMIHRALMGSLERFFG 526 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 V+ + G +W +AP + + NI D E++YA L + G V D E+ Sbjct: 527 VLIEHYAGAFPLW---LAPVQARICNIT---DAQLDYGEEVYAALRRAGVRVEKDLRNEK 580 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + A L P +IVG K ++ V ++ R Sbjct: 581 LNYKIREAQLQKIPYMLIVGDKEAAEGTVTVRQR 614 >gi|225025724|ref|ZP_03714916.1| hypothetical protein EIKCOROL_02627 [Eikenella corrodens ATCC 23834] gi|224941505|gb|EEG22714.1| hypothetical protein EIKCOROL_02627 [Eikenella corrodens ATCC 23834] Length = 635 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 87/414 (21%), Positives = 165/414 (39%), Gaps = 55/414 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R E + G E+ P + W +SG + +Y Sbjct: 257 LQDEAPGMVFWHPRGWTLWQTIEQHMRRELDAAGYREVKTPQILDKTFWEKSGHWANYKD 316 Query: 92 EMLRLA-DRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M + ++ D A+ + P H IF ++SYR+LP + R+E Sbjct: 317 NMFTTSSEKRDYAVKPMNCPGH----VQIFNHGLRSYRDLPMRLAEFGSCHRNEPSGALH 372 Query: 148 GVMRSREFLMKDAYSF---DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGG 204 G+MR R F+ DA+ F D E ++ ++N++ ++I+ + G + + ++ P Sbjct: 373 GLMRVRGFVQDDAHIFCTEDQIAEETR-AFNQLV---MKIYKQFGFEHVSIKLSLRPEQR 428 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 + E A+ G + +P E A Y + H Sbjct: 429 AGTDETWDKAEQGLRDALTACGVQWEELPGEG-----------------AFYGPKVEYH- 470 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGAD-GKDHYVQMGSYGIGA 321 + D+L R + G I + LP + A + D G+ V + +G+ Sbjct: 471 --IKDAL-------GRSWQCGTI---QLDFVLPERLGAEYVTEDNGRARPVMLHRAILGS 518 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + ++ H G +W +AP ++ ++NI D C ++ +L G Sbjct: 519 LERFIGILIEEHAGSFPLW---LAPVQMVVMNITEKQA---DYCLEVVNKLKAAGLRAEA 572 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + + +P QV+VG K + + +V ++ + + M +EE I Sbjct: 573 DLRNEKIGYKIRDNSQMRYPYQVVVGDKEMENGQVAVRRKGEDLG-SMQIEEFI 625 >gi|154502817|ref|ZP_02039877.1| hypothetical protein RUMGNA_00631 [Ruminococcus gnavus ATCC 29149] gi|153796700|gb|EDN79120.1| hypothetical protein RUMGNA_00631 [Ruminococcus gnavus ATCC 29149] Length = 642 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 105/448 (23%), Positives = 172/448 (38%), Gaps = 74/448 (16%) Query: 15 PRDAEIASHKLMLRTGMIHQHSK---------------GIYSWLPLGQKALDNVNAIIRE 59 P+ AE+ + ML H K G +LP G + + RE Sbjct: 222 PKKAELEEYLNMLEEAKKRDHRKLGKELGLFMMRDEGPGFPFFLPNGMVLKNVLLDYWRE 281 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIF 118 + G +E+S P + S LW SG +D Y + M + D D A+ P + + Sbjct: 282 IHRKAGYVEISTPVMLSRHLWETSGHWDHYKENMYTTVIDEEDFAI--KPMNCPGGILAY 339 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++ +SYR+LP ++ L R E + G+MR R F DA+ F +TP+ K + Sbjct: 340 QAEPRSYRDLPIRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIF-MTPDQIKDEIKGV 398 Query: 178 FVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 ++ G K + R E +G D E A G Sbjct: 399 AGLINEVYSLFGFKYHVELSTRPEDS-MGSDEDWEMATDALRGA---------------- 441 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT-- 292 DD+ + E A Y D H E DS +G + GT Sbjct: 442 ----LDDLGLPYVVNEGDGAFYGPKIDFHLE---DS-------------IGRTWQCGTIQ 481 Query: 293 -KYSLPM--SATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPF 347 + LP+ + GADG+ H + + G++ R + +IE +P +AP Sbjct: 482 LDFQLPLRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILIEHFAGA----FPTWLAPV 537 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 ++ ++ I D+ + + + +L+ G D E+IG + A + P ++VG Sbjct: 538 QVKVLPIS--DKYL-EYGQSVLDQLNAAGIRAEIDTRAEKIGYKIREAQMKKIPYMLVVG 594 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +K + KV ++ R G LEE I Sbjct: 595 AKEEEEKKVSVRSRFAGDEGQKGLEEFI 622 >gi|148555657|ref|YP_001263239.1| threonyl-tRNA synthetase [Sphingomonas wittichii RW1] gi|148500847|gb|ABQ69101.1| threonyl-tRNA synthetase [Sphingomonas wittichii RW1] Length = 690 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 97/412 (23%), Positives = 156/412 (37%), Gaps = 63/412 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + ++G W P G + + A +R + + G +E+ P L A W +SG + Y + Sbjct: 287 LQSEAQGSVFWHPKGFRLWRALEAYMRRKLDAAGYVEVKTPQLMDARQWEQSGHWGKYRE 346 Query: 92 EMLRLADRNDKAMIYGPT---HEEVMT----------DIFRSHIKSYRNLPFTFYQIQLK 138 M + D A GP E+M IFR IKSYR+LP + Sbjct: 347 NMFVVPDEIPNAEEEGPVLSGESELMALKPMNCPAHVLIFRQGIKSYRDLPIRMAEFGCC 406 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR-LGLKSIPMR 196 R+E G+MR R+F DA+ F E + K F L +R LG + ++ Sbjct: 407 HRNEPHGALHGIMRVRQFTQDDAHIF--VREDQLIAEIKDFCDLLDAVYRDLGFEQYAIK 464 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ--WT- 253 P + F S++ D +E T D + + E W Sbjct: 465 LALRP-----------------EKRFGSEEMWD---KAEQTLRDAVAASGRATEAFGWEE 504 Query: 254 -----APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A YA + H L D++ R +VG I T + A++ G DG+ Sbjct: 505 LEGEGAFYAPKLEFH---LTDAI-------GRTWQVGTI-QADTVLPERLDASYVGEDGE 553 Query: 309 DHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 H M I G ++ H G+ +W +AP + + I + D + Sbjct: 554 RHRPVMLHRAILGTFERFIGILIEHHAGRFPLW---LAPVQAVVATIVSD---ADDYARE 607 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + A+L+ G V D E+I + L P ++VG + + V I+ Sbjct: 608 VEAKLAAAGLRVESDLRNEKINYKVREHSLAKVPALLVVGKREAEEGTVAIR 659 >gi|146295981|ref|YP_001179752.1| threonyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409557|gb|ABP66561.1| Ser-tRNA(Thr) hydrolase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 639 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 96/399 (24%), Positives = 155/399 (38%), Gaps = 47/399 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G +LP G + + REE + G E+ P + + DLWV+SG +D Y K Sbjct: 258 IFEQGPGFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIMLTKDLWVQSGHWDHY-K 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D+ P + +++ SYR LP ++ L R EL G+M Sbjct: 317 ENMYFTKIDDQEFAIKPMNCPGSILVYKRKSHSYRELPERLCELGLVHRHELSGVLHGLM 376 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLS 207 R R F DA+ F + P K + + G K + R E+ +G D Sbjct: 377 RVRCFTQDDAHIF-MLPSQIKDEIKGVIDLIDYFYSVFGFKYHVELSTRPENS-MGTD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN-SIVEQWTAPYAATSDVHNEK 266 E +A+T + + + +N I E A Y D H E Sbjct: 433 -EQWNMAETALKEAL------------------EEVGINYKINEGDGAFYGPKIDFHLE- 472 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVV 325 DSL + + ++ F ++ L + G DG H V + G++ Sbjct: 473 --DSLKRTWQCATIQLD----FQMPERFDL----YYIGEDGAKHRPVMLHRVVFGSIERF 522 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A++ G +W +AP +I +I + + D KI L + G V D Sbjct: 523 IAILTEHFAGAFPVW---LAPIQIRVIPVSDN---FNDYAAKISQTLKENGFRVEEDFRS 576 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E +G + A L P VIVG K ++ + ++ R G Sbjct: 577 ETVGYKIRDAQLQKIPYMVIVGEKERRENTIAVRDRKKG 615 >gi|71032103|ref|XP_765693.1| prolyl-tRNA synthetase [Theileria parva strain Muguga] gi|68352650|gb|EAN33410.1| prolyl-tRNA synthetase, putative [Theileria parva] Length = 683 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 92/420 (21%), Positives = 161/420 (38%), Gaps = 69/420 (16%) Query: 24 KLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-LWV 81 ++++R+ MI + G Y +LP + N ++ + G P + + L Sbjct: 215 QVIVRSEMIEYYDISGCYIFLPASYFIWEIFNEWFNKQIKQRGVDNCYFPMFVTKERLEA 274 Query: 82 ESGRYDSYGKEMLRLADRND----KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQL 137 E + + E+ + D + PT E +M F I+SYR+LP Q Sbjct: 275 EKTHLEGFSPEVAWVTRNGDVDFPDPIAIRPTSETIMYPEFSKWIRSYRDLPLKLNQWNS 334 Query: 138 KFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 R E + +RSREFL ++ ++ T + + + +M Y + + S+P+ Sbjct: 335 VVRWEFKQPTPFIRSREFLWQEGHTAHSTEKEALDTVYEMLDLYSKFYEEY--LSVPV-- 390 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 I G + SEN F Sbjct: 391 ----IKG---------------------------VKSENEKF------------------ 401 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 K+ SL + RG++ GT +S ++ +G+ V S+ Sbjct: 402 -----AGSKMTTSLEAFVPANGRGVQAATSHLLGTTFSDMFDIKYEDEEGEKRKVHQTSW 456 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKV 375 G R + +I D +G++ P VA ++ ++ I K DQV E +Y L++ Sbjct: 457 GFTT-RSIGIMIMVHGDDRGLVVPPRVAKTQVVIVPILTKTADQVISRVNE-LYKLLTES 514 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD G G +F +L G PL++ VG+K V ++ V + R + D+ LE + Sbjct: 515 GFRVKLDDRRGYTPGFKFNHWELRGVPLRLEVGAKDVENNTVRLVRRDNFAKADVPLENL 574 >gi|255323684|ref|ZP_05364814.1| threonyl-tRNA synthetase [Campylobacter showae RM3277] gi|255299398|gb|EET78685.1| threonyl-tRNA synthetase [Campylobacter showae RM3277] Length = 606 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 98/419 (23%), Positives = 166/419 (39%), Gaps = 61/419 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + I+ + G + P L AD+W +SG Y +Y KE + Sbjct: 232 GLPIWLPNGGRLRSKLEQILYKAHRDRGYEPVRGPELLKADVWKKSGHYANY-KENMYFT 290 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + +++S I+SYR+LP F++ + R E G+ R REF Sbjct: 291 TIDEAEYGIKPMNCVGHIKVYQSDIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFA 350 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 D++ F P K + ++ +I G M + P IGGD Sbjct: 351 QDDSHIF-CMPSQIKENILEILKFAGKIMENFGF-HYEMEISTKPAKAIGGD-------- 400 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ET K+ +D EN I E A Y D+ K+ D+L Sbjct: 401 -EIWETATKALKEALD-----ENG------FKYGIDEGGGAFYGPKIDI---KITDAL-- 443 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD--------HYVQMGSYGIGAMRVV 325 R + G I ++LP D + H +GS+ R + Sbjct: 444 -----KRKWQCGTI---QVDFNLPERFDLGYIDANNERQQPVMLHRALLGSF----ERFI 491 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +IE H G + P VAP ++ ++ I AH D + + L K+G D Sbjct: 492 GILIE--HTGGEL--PFFVAPTQVVIVPISDAH----LDYAKTVAKELRKIGVDSEIASK 543 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E + + A+ P+ ++G V++S + ++ R T ++DM L+E + + + Sbjct: 544 NESLNKRIRTAEKQRVPMIAVLGDNEVANSAIALRDRTTREQKDMKLDEFVGLLKSKLA 602 >gi|228995766|ref|ZP_04155427.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17] gi|228764010|gb|EEM12896.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17] Length = 476 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 71/343 (20%), Positives = 138/343 (40%), Gaps = 72/343 (20%) Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRS 152 +LA+R + PT E + + F ++SY +LP + Q +++ RP +R+ Sbjct: 103 KLAER----LCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---FLRT 155 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 EFL ++ ++ T E S+ + Y Sbjct: 156 TEFLWQEGHTIHETAEESQEETLNILNLYAS----------------------------- 186 Query: 213 LADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ---------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD------- 222 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + ++ G FGT +S F +GK YV S+G+ + R++ +I Sbjct: 223 -------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGLIMV 274 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 D G++ P VAP ++ ++ I H + + ++ R+ KV V D + G + Sbjct: 275 HSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATQLQGRIQKVA-RVKIDASNKTPGWK 333 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 334 FNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFVSMDQL 376 >gi|323466103|gb|ADX69790.1| Threonyl-tRNA synthetase 1 [Lactobacillus helveticus H10] Length = 661 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 94/407 (23%), Positives = 166/407 (40%), Gaps = 43/407 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I + + G + P L + D + SG + Y +M Sbjct: 277 GLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 336 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + IF+ HI+SYR+LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VALDQVQTEFAKILKLIMDVYKDFDITDYYFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M D + L+ + E A Y D+ + +L + Sbjct: 442 PKNTDKYFANDEMWEKSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 499 ETMSTIQLD----FMLPDRFGL----TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIY 550 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N +AH + EK+ A L+K G V DD E++G + Sbjct: 551 KGAFPTW---LAPVQAEIIPVNNEAHGEY----AEKVRAELAKRGFRVEVDDRNEKMGYK 603 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM--SLEEVIN 436 + P +++G + + KV + R G E++ SL++ IN Sbjct: 604 IRESQTQKVPYTLVLGDEEMKSGKVNV--RCYGTDEEISKSLDDFIN 648 >gi|83594816|ref|YP_428568.1| threonyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] gi|123753041|sp|Q2RNL4|SYT_RHORT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|83577730|gb|ABC24281.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] Length = 643 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 92/412 (22%), Positives = 155/412 (37%), Gaps = 50/412 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + ++G W P G + +R + G +E++ P L LW +SG ++ + + Sbjct: 256 LQEEAQGAVFWHPKGWTVYRTLQNYMRRRLDLAGYVEVNTPMLVDRALWEKSGHWEKFRQ 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M +++ DK + P + IF+ IKSYR+LP + R+E G+M Sbjct: 316 NMF-ISEAEDKLLAMKPMNCPCHIQIFKQGIKSYRDLPLRMAEFGACHRNEASGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR-LGLKSIPMRAESGPIGGDLSHE 209 R R F+ DA+ F E S + F L+ +R LG I ++ P Sbjct: 375 RVRAFVQDDAHIF--CTEDQIVSETQAFCDLLKSVYRDLGFTEIKVKFSDRP-------- 424 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 V A + ET E TD + +WT + KL Sbjct: 425 -EVRAGSDETWDKAEAAL------REATDAAGL--------EWTL-NPGEGAFYGPKLEF 468 Query: 270 SLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L + +G + GT + LP + A + G DG H M I G Sbjct: 469 VLRDA---------IGRDWQCGTLQVDFVLPERLGADYVGEDGDKHRPVMLHRAILGTFE 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G+ W +AP ++ + I + D + A L G D Sbjct: 520 RFMGILIENCAGRFPFW---LAPVQVVVATITSD---ADDYARTVLAALKAKGLRAVADL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+I + L P+ ++VG K V ++ +E ++L+E I Sbjct: 574 RNEKINYKVREHSLAKVPVMLVVGRKEAETGGVALRRLGGQSQEVLALDEAI 625 >gi|229107523|ref|ZP_04237275.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-28] gi|228675915|gb|EEL31008.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-28] Length = 476 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 82/406 (20%), Positives = 164/406 (40%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ H G +S +AE+ I + Sbjct: 153 LRTTEFLWQEGHTI----------------------HETGEES---QAETLNILNLYAS- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC ++++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EEYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + + ++ R+ KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPLQVVIVPIAQHKEGVLEKATELQGRIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|206968558|ref|ZP_03229514.1| prolyl-tRNA synthetase [Bacillus cereus AH1134] gi|206737478|gb|EDZ54625.1| prolyl-tRNA synthetase [Bacillus cereus AH1134] Length = 476 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 159/406 (39%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y+ Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYVS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ A + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQAHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E + ++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQL 376 >gi|167042805|gb|ABZ07523.1| putative tRNA synthetase class II core domain (G, H, P, S and T) [uncultured marine microorganism HF4000_ANIW137I15] Length = 627 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 99/436 (22%), Positives = 171/436 (39%), Gaps = 65/436 (14%) Query: 31 MIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 +IH Q G+ WLP G + +E R G + +P L + L+ SG YD Y Sbjct: 239 LIHEQAGSGLVYWLPHGAVLRKVIERFWEDEHVRRGYELVVIPHLVHSRLFRTSGHYDFY 298 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M L + + + + P + I+++ +SYR+LP + ++ +R+E G Sbjct: 299 KENMFTL-EVDGEEYVAKPMNCPGHILIYQNERRSYRDLPIRYAEMGTVYRNERSGVLHG 357 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 ++R R F DA+ F TPE +P G I G L Sbjct: 358 MLRVRGFTQDDAHIF-CTPE-----------------------QLP-----GEILGVLDM 388 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDD-----IISLNSIVEQWTAPYAATSDVH 263 +LA G + D P + DD SL +++ + PY Sbjct: 389 TLFMLATFGFERFEIELSVRDPAHPEKYAGSDDEWKAAEASLVQALDERSLPYRRCEGEA 448 Query: 264 -------NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK--GADGKDHYVQM 314 + K+ D+L RG + I + ++LP K GADG H M Sbjct: 449 VFYGPKIDVKIVDAL-------GRGWQASTIQF---DFNLPRRFDLKYVGADGDFHTPYM 498 Query: 315 GSYG-IGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 +G++ R V A+IE + G +W ++P ++ ++ I + D ++ A L Sbjct: 499 VHRALLGSLERFVGALIEHTA-GAFPLW---LSPVQVKVLPITERNH---DHARRVAASL 551 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G V DD E++G + L P +++G + +V ++ R G M L+ Sbjct: 552 KESGLRVDVDDRNEKLGYKIRQGRLERTPYLLVIGDREQESQQVAVRDRTEGNLGAMGLD 611 Query: 433 EVINYASHRFSNNRPV 448 ++ + P Sbjct: 612 AFLDRVQPEMAPRTPA 627 >gi|296133381|ref|YP_003640628.1| threonyl-tRNA synthetase [Thermincola sp. JR] gi|296031959|gb|ADG82727.1| threonyl-tRNA synthetase [Thermincola potens JR] Length = 637 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 90/404 (22%), Positives = 158/404 (39%), Gaps = 57/404 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G + P G + + RE+ + G E+ P + + LW +SG +D Y + Sbjct: 257 IQEEGPGFPFFHPKGMIVRNELEKFWREQHEKAGYQEIRTPIILNRSLWEQSGHWDHY-R 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D P + ++++ + SYR+ P ++ L R E+ G+M Sbjct: 316 ENMYFTKIDDIDFAVKPMNCPGSILVYKTRLHSYRDFPIRLAELGLVHRHEMSGVLHGLM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNK---MFVSYLRIF---HRLGLKSIPMRAESGPIGG 204 R R F DA+ F + P K K + ++ ++F + + L + P +A +G Sbjct: 376 RVRCFTQDDAHIF-MLPSQIKDEIIKVIDLIDNFYKVFGFKYHVELSTKPEKA----MGS 430 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 D E LA + +K MDF I + F Y D H Sbjct: 431 D---EIWDLATNALKEALAAKG-MDFKINEGDGAF----------------YGPKIDFH- 469 Query: 265 EKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIG 320 L D L R + G I F K+ L T+ G DG+ H V + G Sbjct: 470 --LMDCL-------GRTWQCGTIQLDFLMPEKFDL----TYVGEDGQKHRPVMIHRVVFG 516 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ G +W ++P + ++ + + EK+ L + G V Sbjct: 517 SIERFIGILIEHFAGALPVW---LSPVQAKIMTVTDR---SKQYAEKVADWLKEKGVRVE 570 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 D E+IG + A + P ++VG K + + V ++ R G Sbjct: 571 VDARNEKIGYKIREAQVEKVPYMLVVGDKEMENGTVAVRKRGEG 614 >gi|216264165|ref|ZP_03436157.1| prolyl-tRNA synthetase [Borrelia burgdorferi 156a] gi|215980638|gb|EEC21445.1| prolyl-tRNA synthetase [Borrelia burgdorferi 156a] Length = 488 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 96/428 (22%), Positives = 171/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L + L E D + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDVYKRF------------------------IEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG++ P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMGHSDEKGLVLPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVDALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTISRR 365 >gi|114566616|ref|YP_753770.1| threonyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318333|sp|Q0AY05|SYT_SYNWW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114337551|gb|ABI68399.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 635 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 90/395 (22%), Positives = 152/395 (38%), Gaps = 51/395 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM-LRL 96 G +LP G + + REE + G E+ P + S +LW SG +D Y M Sbjct: 261 GFPFFLPKGMVLRNELENFWREEHRKAGYQEIRTPIILSRELWERSGHWDHYKDNMYFTT 320 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D A+ P + +++ ++ SY+ LP ++ L R E+ G+MR R F Sbjct: 321 IDEGDYAI--KPMNCPGGLLVYKQNLHSYKELPLRMGEMGLVHRHEMSGVLHGLMRVRAF 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKM-----FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 DA+ F L + M F S + + L + P +A +G D E Sbjct: 379 TQDDAHIFMLPEQIIDEIKGVMDLVDRFYSLFGFPYHVELSTKPEKA----MGSD---EI 431 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 +A + + M++ + + F Y D H L DS Sbjct: 432 WEVATNALIKALEERG-MEYKVNEGDGAF----------------YGPKIDFH---LQDS 471 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVI 329 L + ++ F K+ L T+ G DG H M I G++ ++ Sbjct: 472 LDRTWQCGTIQLD----FQMPEKFDL----TYVGEDGGKHRPVMIHRVIYGSIERFIGIL 523 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 G +W +AP ++ ++ I Q +D ++ A L + G V D E+IG Sbjct: 524 TEHFGGAFPLW---LAPVQVRVLPIT---QRSQDYARQVVAELEQAGIRVEADFRSEKIG 577 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + L P +++G + + V ++HR G Sbjct: 578 YKIREGQLQKIPYLLVLGDREAEEGTVSVRHRKEG 612 >gi|42520791|ref|NP_966706.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] gi|73919843|sp|Q73GH6|SYT_WOLPM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|42410531|gb|AAS14640.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 633 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 91/411 (22%), Positives = 161/411 (39%), Gaps = 51/411 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G W G + + + IR++ G E+ P L S +LW SG +D + + Sbjct: 253 IQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWERSGHWDKFRE 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + +K + P + IF SH +SYR+LP + R+E G+M Sbjct: 313 NMFIVDESENKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLM 372 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGGDLSHE 209 R R F DA+ F + E +S F L+ ++ LG I ++ P D+ Sbjct: 373 RVRGFTQDDAHIFCM--EEQVNSETIKFCDLLKEVYSELGFNEISVKFSDRP---DIRAG 427 Query: 210 FIVLADTGETQVF--CSKDFMDFPI-PSENTDFD---DIISLNSIVEQWTAPYAATSDVH 263 + D E + + + + + P E + + + ++I W + Sbjct: 428 NDEVWDRAEKALLEAVKEAGLSYKLNPGEGAFYGPKLEFVLKDAIGRNWQCGTLQVDFI- 486 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAM 322 LPE R+ A FY G ADG K H V + +G Sbjct: 487 -------LPE--RLGA--------FYIG-------------ADGHKHHPVMLHRAILGTF 516 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ ++ GK +W +AP +++++ I +I L + G V D Sbjct: 517 ERFIGILIENYAGKFPVW---LAPTQLAILTITNE---ADGYATEISNILKEQGVRVKTD 570 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 E+I + + P+ IVG V+ V +++ + +E SLE+ Sbjct: 571 LTNEKISYKIRLHSSNKVPILWIVGKNEVTSKTVSVRNLGSERQESFSLEK 621 >gi|302391179|ref|YP_003826999.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] gi|302203256|gb|ADL11934.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] Length = 639 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 96/420 (22%), Positives = 165/420 (39%), Gaps = 59/420 (14%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD KL L + +H KG + P G + + +EE + G E+ P + Sbjct: 246 RDHRKLGQKLDLFS--LHDEGKGFPFFHPKGMVVRNELIDFWKEEHRQAGYKEIKTPVIL 303 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + DLW +SG +D Y KE + + + + P + +++ ++SYR+LP ++ Sbjct: 304 NQDLWKQSGHWDHY-KEDMYFTEIDKEPHAVKPMNCPGGILVYKDKMRSYRDLPIRMGEL 362 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF------HRL 188 L R E G+MR R F DA+ F L P + + RI+ +R+ Sbjct: 363 GLVHRHERSGTLHGLMRVRNFTQDDAHIFCL-PSQIEEELTGVIKLVDRIYAPFGFNYRV 421 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 L + P +A +G D L D + D + I + + D+ + Sbjct: 422 ELSTKPDKA----MGSD------ELWDK-------ATDALREAIEANDLDY-------KV 457 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGA 305 E A Y D H E R + G + F ++ L T+ G Sbjct: 458 NEGDGAFYGPKIDFHLEDCL----------GRTWQCGTVQLDFQMPERFDL----TYVGQ 503 Query: 306 DGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++H M I G++ ++ + G W +AP + +I + D + D Sbjct: 504 DGEEHRPVMIHRAIFGSLERFMGILIEHYAGAFPTW---LAPIQTEVIPV-TDDHL--DY 557 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ L+ G V D E++G + A + P +IVG + D V ++ R G Sbjct: 558 AYQVKEELADAGVRVEVDARQEKVGYKIREAQVQQVPYMLIVGDDEIEDKTVSVRDRREG 617 >gi|294789007|ref|ZP_06754247.1| threonine--tRNA ligase [Simonsiella muelleri ATCC 29453] gi|294483109|gb|EFG30796.1| threonine--tRNA ligase [Simonsiella muelleri ATCC 29453] Length = 638 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 89/413 (21%), Positives = 166/413 (40%), Gaps = 53/413 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R E G E+ P + W +SG + +Y Sbjct: 256 LQDEAPGMVFWHPRGWALWQVIEQHMRHELTAAGYQEVKTPQVMDKTFWEKSGHWANYKD 315 Query: 92 EM-LRLADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M L +++ D A+ + P H IF ++SYR+LP + R+E Sbjct: 316 NMFLTSSEKRDYAVKPMNCPGH----VQIFNHALRSYRDLPMRLAEFGSCHRNEPSGALH 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+MR R F+ DA+ F T + K + ++I+ + G +++ ++ P S Sbjct: 372 GLMRVRGFVQDDAHIF-CTEDQIAEETRKFNLLVMKIYQQFGFENVSIKLSLRPEKRAGS 430 Query: 208 HEFIVLADTG--ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 E A+ G + C ++ + P A Y + H Sbjct: 431 DEIWDKAEQGLRDALTACGVEWEELPGEG-------------------AFYGPKVEYH-- 469 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGAD-GKDHYVQMGSYGIGAM 322 + D+L R + G I + LP + A + D K V + +G++ Sbjct: 470 -IKDAL-------GRSWQCGTI---QLDFVLPERLDAEYVTEDNNKARPVMLHRAILGSL 518 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ H G +W +AP ++ ++NI + Q A ++ A+L G V D Sbjct: 519 ERFIGILIEEHAGSFPLW---LAPVQMVVMNI-SEGQAAYAA--EVQAKLQAAGFRVDLD 572 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + + +P Q+ VG K +++ +V I+ + + +S+ E+I Sbjct: 573 TRNEKIGYKIRDNSTMRYPYQLTVGDKEMANGQVSIRKKAENLG-SVSVNELI 624 >gi|228989573|ref|ZP_04149557.1| Prolyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442] gi|228770110|gb|EEM18690.1| Prolyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442] Length = 476 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 71/343 (20%), Positives = 138/343 (40%), Gaps = 72/343 (20%) Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRS 152 +LA+R + PT E + + F ++SY +LP + Q +++ RP +R+ Sbjct: 103 KLAER----LCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---FLRT 155 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 EFL ++ ++ T E S+ + Y Sbjct: 156 TEFLWQEGHTIHETAEESQEETLNILNLYAS----------------------------- 186 Query: 213 LADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ---------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD------- 222 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + ++ G FGT +S F +GK YV S+G+ + R++ +I Sbjct: 223 -------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGLIMV 274 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 D G++ P VAP ++ ++ I H + + ++ R+ KV V D + G + Sbjct: 275 HSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATQLQGRIQKVA-RVKIDASNKTPGWK 333 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 334 FNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFVSMDQL 376 >gi|221320079|ref|ZP_03601373.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] Length = 643 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 93/406 (22%), Positives = 165/406 (40%), Gaps = 36/406 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S +L+ SG +D Y + M Sbjct: 264 QGLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTPVLGSKELYETSGHWDHYQEGMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I++ I SYR LP ++ R E+ G+ R R Sbjct: 324 MEMDNETLVLRPMNCPHHMMIYKQDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + + ++ GL R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKDEFIRTVRLIQDVYEDFGLSDYTFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M S + D I + E A Y DV ++ ++ + Sbjct: 429 PEDTEKYFDDDEMWNKAQSMLKEAMDEIGHDYYEAEGEAAFYGPKLDV---QVKTAIGKE 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPERFDL----TYIGEDGKQHRPVVIHRGVVSTMERFVAFLIE-E 536 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 H G W +AP + +I + V D +K+ RL G V D E+IG + Sbjct: 537 HKGALPTW---LAPVQFQVIPVSP--AVHLDYAKKVQERLQCEGLRVEVDSRDEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A + P ++VG + + V ++ E +SL+E + A Sbjct: 592 REAQMQKIPYMLVVGDQEAENGAVNVRKYGEQNSETISLDEFVKKA 637 >gi|75761526|ref|ZP_00741486.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74490981|gb|EAO54237.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 503 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 63 KGCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 122 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 123 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 179 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 180 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 213 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 214 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 249 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 250 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 298 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 299 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 357 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 358 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 403 >gi|332184284|gb|AEE26538.1| Threonyl-tRNA synthetase [Francisella cf. novicida 3523] Length = 634 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 81/382 (21%), Positives = 147/382 (38%), Gaps = 48/382 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S GI W G + V +R N+ G E+ P + LW +SG Y + Sbjct: 255 QEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWEKSGHASKYAEN 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N I P + ++ + + SYR+LP + + R+E G++R Sbjct: 315 MFATKSENRDFAIR-PMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLR 373 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F TPE + M ++ G ++ P IG D + Sbjct: 374 VRSFTQDDGHIF-CTPEQVEEEVILMVQQCFEVYKDFGFNDFAVKIALRPENRIGDDETW 432 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + S+ + + + N ++ ++ A Y + H L Sbjct: 433 DK-------------SEQMLKNALDANNVSYE-------LLPGEGAFYGPKIEFH---LK 469 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVV 325 D++ R + G I +S+P + AT+ +G K V + +G++ Sbjct: 470 DAI-------GRSWQCGTI---QLDFSMPQRLGATYIDKNGDKQVPVMLHRAIVGSLERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +APF+++++ I + D C++++ L K G D Sbjct: 520 IGMLIEHYAGNLPLW---LAPFQVAVMGISNNQD---DYCKEVFTMLEKNGIRTKLDLRN 573 Query: 386 EQIGSQFAVADLLGFPLQVIVG 407 E+IG + LL P VI+G Sbjct: 574 EKIGFKIREHTLLRVPYLVILG 595 >gi|228963504|ref|ZP_04124661.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228796198|gb|EEM43649.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str. T04001] Length = 476 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 ITHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|307128623|ref|YP_003880653.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri CARI] gi|306483085|gb|ADM89955.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri CARI] Length = 489 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 74/350 (21%), Positives = 141/350 (40%), Gaps = 76/350 (21%) Query: 96 LADRNDK---AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 + D++ K +I PT E ++ + ++ I SYR+LP F Q R E R RF +R+ Sbjct: 105 IVDKSSKLEDELIVRPTSETIIWNSYKRWINSYRDLPILFNQWANIIRWERRTRF-FLRT 163 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGG--DLSHEF 210 EFL ++ ++ T + + + K+ Y + +IP+ I G S +F Sbjct: 164 SEFLWQEGHTAHSTKKEAINQAKKILNIYTNVLE--NFIAIPV------IQGIKTYSEKF 215 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 G + +C + M Sbjct: 216 -----AGAEKTYCIESIMQ----------------------------------------- 229 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 + +++ + G +S + G YV S+GI + R++ A+I Sbjct: 230 -------DGKSLQIATSHFLGQNFSKAFDVRYSTEKGNKEYVWATSWGI-STRLIGAIIM 281 Query: 331 SSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKV----GCDVFWDD-M 384 + D G+I P +AP +I +I + K +Q+ + EK+ L K G ++ +D + Sbjct: 282 THSDDNGLILPPKIAPIQIVIIPVYKTQEQL--NLIEKLVFPLKKFLEKRGINIKYDKRI 339 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G PL++ +G K + VE+ R T ++ +S+ ++ Sbjct: 340 YYTPGWKFNEYEIKGIPLRITIGKKDIDRGTVEVVRRDTLEKKYISINKL 389 >gi|238927112|ref|ZP_04658872.1| threonine--tRNA ligase [Selenomonas flueggei ATCC 43531] gi|238885092|gb|EEQ48730.1| threonine--tRNA ligase [Selenomonas flueggei ATCC 43531] Length = 639 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 92/388 (23%), Positives = 152/388 (39%), Gaps = 55/388 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H+ G + P G + + RE R G E+S P + S LW SG + Y + Sbjct: 257 LHEEGPGFPFFHPNGMALRNALLDYWREVHRRYGYQEISTPVILSRKLWETSGHWFHY-R 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + +D+ P + ++RS + SYR+LP ++ L R EL G+ Sbjct: 316 ENMYTTEIDDEDYAIKPMNCPGCMLVYRSQLHSYRDLPLRLAELGLVHRHELSGALHGLF 375 Query: 151 RSREFLMKDAYSFDLTP---EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 R R F DA+ F +TP EG +F R F + R E +G D Sbjct: 376 RVRNFTQDDAHLF-VTPDQIEGEIQHTIDLFDEVYRTFGLTYKAELSTRPEDS-MGTD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E LA G + +N D +++ E A Y D H L Sbjct: 432 -EMWELATNGLQKAL------------DNRGLDYVVN-----EGDGAFYGPKIDFH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGA 321 DS +G + GT SLP T+ G DG+ H V + G+ Sbjct: 471 RDS-------------IGRTWQCGTIQLDMSLPEKFDLTYVGEDGEKHRPVMLHRVVYGS 517 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + ++ ++ G +W +AP ++ ++ I + EK+Y ++ G V Sbjct: 518 IERFIGILIENYAGAFPVW---MAPVQVRILPITERHA---EYAEKLYKKMFDCGIRVEI 571 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSK 409 D+ E+ G + + + P ++VG + Sbjct: 572 DERNEKTGYKIRESQVKKTPYTIVVGDQ 599 >gi|16079947|ref|NP_390773.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221310836|ref|ZP_03592683.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221315161|ref|ZP_03596966.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221324361|ref|ZP_03605655.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|135175|sp|P18255|SYT1_BACSU RecName: Full=Threonyl-tRNA synthetase 1; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|143766|gb|AAA22864.1| (thrSv) (EC 6.1.1.3) [Bacillus subtilis] gi|1769999|emb|CAA99608.1| threonyl-tRNA-synthetase [Bacillus subtilis] gi|2293284|gb|AAC00362.1| threonine tRNA synthetase [Bacillus subtilis] gi|2635360|emb|CAB14855.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] Length = 643 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 93/406 (22%), Positives = 165/406 (40%), Gaps = 36/406 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S +L+ SG +D Y + M Sbjct: 264 QGLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTPVLGSKELYETSGHWDHYQEGMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + I++ I SYR LP ++ R E+ G+ R R Sbjct: 324 MEMDNETLVLRPMNCPHHMMIYKQDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + + ++ GL R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKDEFIRTVRLIQDVYEDFGLSDYTFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M S + D I + E A Y DV ++ ++ + Sbjct: 429 PEDTEKYFDDDEMWNKAQSMLKEAMDEIGHDYYEAEGEAAFYGPKLDV---QVKTAIGKE 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPERFDL----TYIGEDGKQHRPVVIHRGVVSTMERFVAFLIE-E 536 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 H G W +AP + +I + V D +K+ RL G V D E+IG + Sbjct: 537 HKGALPTW---LAPVQFQVIPVSP--AVHLDYAKKVQERLQCEGLRVEVDSRDEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A + P ++VG + + V ++ E +SL+E + A Sbjct: 592 REAQMQKIPYMLVVGDQEAENGAVNVRKYGEQNSETISLDEFVKKA 637 >gi|288925105|ref|ZP_06419041.1| proline--tRNA ligase [Prevotella buccae D17] gi|288338295|gb|EFC76645.1| proline--tRNA ligase [Prevotella buccae D17] Length = 493 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 84/160 (52%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ T+ D K YV S+G+ + R++ A+I D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTYLNKDNKPEYVWATSWGV-STRLMGALIMVHSDDNGL 294 Query: 339 IWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ +I I K +DQ+ + + RL +G V +DD ++ G +FA Sbjct: 295 VLPPKLAPIQVVIIPITKGNDQLQAINAKLQPVIDRLRDMGISVKYDDADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +L G P+++++G + + D+ +EI R T +E +S + + Sbjct: 355 YELKGVPVRLVMGGRDLEDNTIEIMRRDTLEKESVSFDGI 394 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A R D+ +I PT E ++ + +++ I S+R+LP Q R E+R R +R+ EFL Sbjct: 114 AARLDEELIIRPTSETIIWNTYKNWIHSWRDLPIMCNQWCNVMRWEMRTR-PFLRTSEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|311747151|ref|ZP_07720936.1| threonine--tRNA ligase [Algoriphagus sp. PR1] gi|126578860|gb|EAZ83024.1| threonine--tRNA ligase [Algoriphagus sp. PR1] Length = 649 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 97/451 (21%), Positives = 174/451 (38%), Gaps = 63/451 (13%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +++E RD +L L T + G+ WLP G + + +++ Q++ Sbjct: 232 KEYLEMIEEAKKRDHRKLGRELELFT-FSEKVGMGLPLWLPKGTLLRERLVNFLKKAQDK 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSH 121 G ++ P + L+ SG Y+ YGK+ + + + P + +I++ Sbjct: 291 AGYQQVITPHIGHKVLYETSGHYEKYGKDSFQPITTPHEGEEFLLKPMNCPHHCEIYKHK 350 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY+ LP + + +R E G+ R R F DA+ F P+ K + K+ Sbjct: 351 PHSYKELPIRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CRPDQVKEEFIKVIDL 409 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 L +F LG + I L D + + D Sbjct: 410 VLYVFKALGFDDFTAQ--------------ISLRDPENPEKYIGGD-------------- 441 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT 292 E W +A + EK D++ E + G + +G + GT Sbjct: 442 ---------EAWDKAESAIIEAAAEKGLDTVTELGEAAFYGPKLDFMVKDALGRKWQLGT 492 Query: 293 ---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 Y LP + G+D + H V + G++ AV+ G +W ++P Sbjct: 493 IQVDYQLPERFQLEYIGSDNQKHRPVMIHRAPFGSLERFVAVLIEHCAGNFPLW---LSP 549 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 +I+++ I + D E+I L + G D+ E+IG + +++ P +IV Sbjct: 550 EQINILPI---SEKFVDYAEEIKGILDEAGISGSIDNRDEKIGRKIRDSEVKKVPFMLIV 606 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G K + K+ ++ G + S EE INY Sbjct: 607 GEKEKEERKLSVRKHGQGDLGNFSPEEFINY 637 >gi|157825427|ref|YP_001493147.1| threonyl-tRNA synthetase [Rickettsia akari str. Hartford] gi|166225491|sp|A8GML4|SYT_RICAH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157799385|gb|ABV74639.1| threonyl-tRNA synthetase [Rickettsia akari str. Hartford] Length = 635 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 Y L + + RD KL + H + ++G+ W G + + IR++ + Sbjct: 231 YLLMLEEAEKRD----HRKLGKELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L LW SG ++ + +M L D +DK + P + IF+ IK Sbjct: 287 NGYTEVKTPVLVDKSLWEASGHWEKFRDDMFAL-DTDDKTLALKPMNCPCHVQIFKQGIK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP + L R+E G+MR R + DA+ F Sbjct: 346 SYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIF 386 >gi|325287208|ref|YP_004262998.1| Prolyl-tRNA synthetase [Cellulophaga lytica DSM 7489] gi|324322662|gb|ADY30127.1| Prolyl-tRNA synthetase [Cellulophaga lytica DSM 7489] Length = 492 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 68/339 (20%), Positives = 141/339 (41%), Gaps = 65/339 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ + ++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 116 EEELVVRPTSEAIIWNTYKGWIQSYRDLPLLINQWANVVRWEMRTRL-FLRTAEFLWQEG 174 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T + +M Y AD E Sbjct: 175 HTAHATENEAIAEAEQMMDVY--------------------------------ADFAE-- 200 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 DFM P+ + L + E+ +A + + ++L ++ + Sbjct: 201 -----DFMAVPV---------VKGLKTPSER----FAGAVETY---CIEALMQD----GK 235 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ F +GK +V S+G+ + R++ A+I + D G++ Sbjct: 236 ALQAGTSHFLGQNFAKAFDVKFASKEGKQEHVWATSWGV-STRLMGALIMTHSDDNGLVL 294 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKI---YARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 P +AP ++ ++ I D+ EK+ L G V +D+ + G +F + Sbjct: 295 PPKLAPIQVVIVPIYKGDEQLDAISEKVNPLVKELRAKGISVKFDNRDTHKPGFKFNEYE 354 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L G P+++ +G + + + E+ R T +E ++ ++VI Sbjct: 355 LKGVPVRIAIGKRDLENGTYEVARRDTLEKEIVNADDVI 393 >gi|145511956|ref|XP_001441900.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409161|emb|CAK74503.1| unnamed protein product [Paramecium tetraurelia] Length = 609 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 90/410 (21%), Positives = 171/410 (41%), Gaps = 70/410 (17%) Query: 42 WLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND 101 +LP G K + + +IR+E G E+ P L + +LW +SG D Y + + +D Sbjct: 248 FLPHGTKIYNKLIEMIRKEYRERGYQEVITPQLFNKELWKQSGHLDKYAENIYMT---HD 304 Query: 102 KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDA 160 M P + ++++ SY+ LP F + R+E+ G+ R R+F DA Sbjct: 305 HQMGLKPMNCPGHCLLYKTLQHSYKELPIRFADFGVLHRNEVHGTLTGLTRVRKFTQDDA 364 Query: 161 YSFDLTPEGSKHSYNKM-FVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGE 218 + F + + N + F+S R++ R G + + GDL + D E Sbjct: 365 HIFCTIEQIQQEIKNTLDFLS--RVYGRFGFTWELTLSTRPDKYIGDLQ-----IWDEAE 417 Query: 219 TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDV----HNEK-------- 266 Q+ I +T + + + Y DV HN+K Sbjct: 418 RQL---------RIALSDTQYTENPGDGAF-------YGPKIDVLIRDHNQKQHQCGTIQ 461 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 L +LPE ++ + K+S P+ H +GS + + Sbjct: 462 LDFNLPERFDLTYH--------HENDKFSRPVMI---------HRAILGS-----IERMM 499 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++ ++GK WP ++P ++ +I + ++ + ++IY +L K+G +V +D + Sbjct: 500 AILTEQYNGK---WPFWLSPRQVMIIPV---SEISKQYAKEIYDQLYKLGFEVELEDTEQ 553 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR-EDMSLEEVI 435 +G + ++L F + VG+K + V+++ R + + M L+E I Sbjct: 554 TLGKRIRKGEMLHFNYIITVGAKEQESNTVDVRERGDNHKHQSMKLDEFI 603 >gi|237801015|ref|ZP_04589476.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023872|gb|EGI03929.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 640 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 93/434 (21%), Positives = 162/434 (37%), Gaps = 68/434 (15%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + Y L I + RD K+ R G+ H + + G+ W P G + +R+ Q Sbjct: 229 AAYILRIEEAEKRD----HRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQ 284 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G +E+ P + LW +SG + +Y M N I P + +F Sbjct: 285 RENGYLEIKTPQVVDRSLWEKSGHWANYADNMFTTESENRDYAI-KPMNCPCHVQVFNQG 343 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP + R+E G+MR R F DA+ F E + + F+ Sbjct: 344 LKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIK 401 Query: 181 Y-LRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---P 233 L ++ G K I ++ + P +G D L D E+ + + D P P Sbjct: 402 LTLDVYADFGFKDIELKLSTRPEKRVGSD------ELWDRAESALASALDSAGLPYDLQP 455 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT- 292 E + I + L D L G ++ GT Sbjct: 456 GEGAFYGPKIEFS--------------------LKDCL-------------GRVWQCGTL 482 Query: 293 --KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 ++LP ++A + D + + V + +G+ ++ ++G W +AP Sbjct: 483 QLDFNLPIRLNAEYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPT 539 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + ++NI D ++ L++ G D E+IG + LL P +++G Sbjct: 540 QAVIMNITDKQA---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIG 596 Query: 408 SKFVSDSKVEIKHR 421 + V V ++ R Sbjct: 597 DREVEMQTVAVRTR 610 >gi|223039114|ref|ZP_03609404.1| threonyl-tRNA synthetase [Campylobacter rectus RM3267] gi|222879475|gb|EEF14566.1| threonyl-tRNA synthetase [Campylobacter rectus RM3267] Length = 606 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 97/419 (23%), Positives = 165/419 (39%), Gaps = 61/419 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + I+ + G + P L AD+W +SG Y +Y KE + Sbjct: 232 GLPIWLPNGGRLRSKLEQILYKAHRDRGYEPVRGPELLKADVWKKSGHYANY-KENMYFT 290 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + +++S I+SYR+LP F++ + R E G+ R REF Sbjct: 291 TIDEAEYGIKPMNCVGHIKVYQSDIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFA 350 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 D++ F P K + ++ +I G M + P IGGD Sbjct: 351 QDDSHIF-CMPSQIKENILEILKFAGKIMENFGF-HYEMEISTKPAKAIGGD-------- 400 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ET K+ +D EN I E A Y D+ K+ D+L Sbjct: 401 -EIWETATKALKEALD-----ENG------FKYGIDEGGGAFYGPKIDI---KITDAL-- 443 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD--------HYVQMGSYGIGAMRVV 325 R + G I ++LP D + H +GS+ R + Sbjct: 444 -----KRKWQCGTI---QVDFNLPERFDLGYIDANNERRQPVMLHRALLGSF----ERFI 491 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +IE + G P VAP ++ ++ I AH D + + L K+G D Sbjct: 492 GILIEHT----GGELPFFVAPTQVVIVPISDAH----LDYAKTVAKELRKIGVDSEIASK 543 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E + + A+ P+ ++G V++S + ++ R T ++DM L+E + + + Sbjct: 544 NESLNKRIRTAEKQRVPMIAVLGDNEVANSAIALRDRTTREQKDMKLDEFVGLLKSKLA 602 >gi|254166566|ref|ZP_04873420.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|289596405|ref|YP_003483101.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|197624176|gb|EDY36737.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|289534192|gb|ADD08539.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469] Length = 465 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 82/394 (20%), Positives = 153/394 (38%), Gaps = 73/394 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG++ WLP G + + N++ R+ E+ P L + E+ + + E+ Sbjct: 29 KGMHVWLPYGWQLMRNIDEYFRKVFTEHKHQEVYFPLLIPETEFKKEAEHIEGFENEVYW 88 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D D ++ PT E M +F I+S+ +LP +QI FR E + +R Sbjct: 89 VTHGGLDPLDVKLVVRPTSETAMYPMFSLWIRSHADLPLRIFQIVNVFRYETKQTRTFIR 148 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE ++++ T E S+ + ++ +L L + +R Sbjct: 149 VREVHFFESHTAHATAEESEEQIKDNIEIWKKVADKLALPYVLVR--------------- 193 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 TD+D P AA S + E + S Sbjct: 194 ------------------------KTDWDKF------------PGAAYS-IGAETIMPS- 215 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 R +++ I + +S P + DG YV ++G+ + R+V A++ Sbjct: 216 -------GRTLQIATIHQYFQNFSKPYGIEYLKEDGTHDYVHQTTFGM-SERLVGAIVGI 267 Query: 332 SHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDA--CEKIYARLSKVGCDVFWDDMGEQ 387 D +G+I P +AP ++ ++ I K + + ++A E L +V D D Sbjct: 268 HGDNRGLILPPEIAPIQVVIVPIVNKNKEGILQEARKIENELKELYRVHLD---DRDNYT 324 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +F +L G PL++ +G + + +V + R Sbjct: 325 PGYKFYDWELKGVPLRLEIGPRDLEKGQVVLVRR 358 >gi|327311077|ref|YP_004337974.1| prolyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] gi|326947556|gb|AEA12662.1| prolyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] Length = 491 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 90/405 (22%), Positives = 151/405 (37%), Gaps = 68/405 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG + W P G K NV A+IRE + TG E+ P + + ES + E+ Sbjct: 44 KGAFVWRPYGMKIRRNVEAVIRELHDSTGHQEVLFPVFIPYEFFSKESQHIRGFESEVFW 103 Query: 96 LADRNDKA--MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 ++ + +I PT E M +F+ I+ +R+LP YQI FR E + ++R R Sbjct: 104 VSKGGEAGERLILRPTSETAMMPMFKLWIQDHRDLPLAVYQIVSVFRAETKMTNPMIRVR 163 Query: 154 EFLM-KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 E M K+A++ E ++ Y +IF ++ IP P + Sbjct: 164 EISMFKEAHTAHADREDAERQVRLAVDIYKKIFDKM---CIPYLISQRPEWDKFAGAVYT 220 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 +A FD I+ ++ T Y T+ F + Sbjct: 221 IA------------------------FDTILPDGRTLQIGTVHYLGTN-------FSKVF 249 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 E + G H + T Y + I AM ++ Sbjct: 250 EVTYLRPDG---SHEYVHTTSYGI------------------SERSIAAMLIIHG----- 283 Query: 333 HDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-G 389 D G P ++AP + ++ I + +A + RL G V DD ++ G Sbjct: 284 -DDAGTTIPPALAPIQAVVVPIIYGEERKAVMEAASSVAERLRASGVRVHIDDREDKTPG 342 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +F +L G PL++ +G + V V + R T + + L+E+ Sbjct: 343 WKFYYWELKGVPLRIEIGKRDVEQRSVVLARRDTLEKYSVGLDEL 387 >gi|58697298|ref|ZP_00372664.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] gi|58536340|gb|EAL59818.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] Length = 580 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 7/204 (3%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 R+K L E ++AE H+ + + I + + G W G + + + IR+ Sbjct: 221 RNKDELNAYLECLKEAEKRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRK 280 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 + G E+ P L S +LW +SG +D + + M + + K + P + IF Sbjct: 281 KLINNGYFEVKTPILVSKELWEKSGHWDKFRENMFIVDESESKKLAIKPMNCPCHVQIFN 340 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 SH +SYR+LP + R+E G+MR R F DA+ F + E +S F Sbjct: 341 SHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCM--EEQVNSETIKF 398 Query: 179 VSYLR-IFHRLGLKSIPMRAESGP 201 L+ ++ LG I ++ P Sbjct: 399 CDLLKEVYSELGFNEISVKFSDRP 422 >gi|224533738|ref|ZP_03674326.1| prolyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] gi|224513031|gb|EEF83394.1| prolyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] Length = 488 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 96/428 (22%), Positives = 171/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L + L E D + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDVYKRF------------------------IEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG++ P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVDTLKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTISRR 365 >gi|223888966|ref|ZP_03623557.1| prolyl-tRNA synthetase [Borrelia burgdorferi 64b] gi|223885782|gb|EEF56881.1| prolyl-tRNA synthetase [Borrelia burgdorferi 64b] Length = 488 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 96/428 (22%), Positives = 171/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L + L E D + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDVYKRF------------------------IEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG++ P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVDALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTISRR 365 >gi|222110646|ref|YP_002552910.1| threonyl-tRNA synthetase [Acidovorax ebreus TPSY] gi|254783520|sp|B9MHX8|SYT_DIAST RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|221730090|gb|ACM32910.1| threonyl-tRNA synthetase [Acidovorax ebreus TPSY] Length = 639 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 89/391 (22%), Positives = 151/391 (38%), Gaps = 56/391 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I +HS G W P G V +R G E+ P + LW ++G +D Y Sbjct: 255 IDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQILDKTLWEKTGHWDKYRD 314 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M +++ D A+ P + IF+ IKSYR+LP + + R+E G+ Sbjct: 315 NMFTTESEKRDYAL--KPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGD 205 MR R F D + F E + + + L +++ G +I + + P IG D Sbjct: 373 MRVRGFTQDDGHIF--CTEDHILAECTAYTALLQKVYKNFGFHNIIYKVATRPEARIGSD 430 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 S D E + S + + +F+ AP + Sbjct: 431 ES------WDKAEHALMES-------LRASGCEFE------------IAP--GDGAFYGP 463 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 K+ +L + +G + GT +S+P + A + G DG H V + + Sbjct: 464 KIEYTLKDA---------IGRQWQCGTMQVDFSMPERLDAEYVGEDGGRHRPVMLHRAIV 514 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCD 378 G++ ++ H G +W +AP +++++NI A CR+ K+ L G Sbjct: 515 GSLERFIGILIEEHAGALPVW---LAPVQVAVLNITDAQQDYCREIAAKLQKALPNQGLR 571 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 V D E+I + L P ++ G K Sbjct: 572 VVTDLRNEKITYKIREHSLQKLPYILVAGDK 602 >gi|254167402|ref|ZP_04874254.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|197623665|gb|EDY36228.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469] Length = 465 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 82/394 (20%), Positives = 153/394 (38%), Gaps = 73/394 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG++ WLP G + + N++ R+ E+ P L + E+ + + E+ Sbjct: 29 KGMHVWLPYGWQLMRNIDEYFRKVFTEHKHQEVYFPLLIPETEFKKEAEHIEGFENEVYW 88 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D D ++ PT E M +F I+S+ +LP +QI FR E + +R Sbjct: 89 VTHGGLDPLDVKLVVRPTSETAMYPMFSLWIRSHADLPLRIFQIVNVFRYETKQTRTFIR 148 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE ++++ T E S+ + ++ +L L + +R Sbjct: 149 VREVHFFESHTAHATAEESEEQIKDNIEIWKKVADKLALPYVLVR--------------- 193 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 TD+D P AA S + E + S Sbjct: 194 ------------------------KTDWDKF------------PGAAYS-IGAETIMPS- 215 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 R +++ I + +S P + DG YV ++G+ + R+V A++ Sbjct: 216 -------GRTLQIATIHQYFQNFSKPYGIEYLKEDGTHDYVHQTTFGM-SERLVGAIVGI 267 Query: 332 SHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDA--CEKIYARLSKVGCDVFWDDMGEQ 387 D +G+I P +AP ++ ++ I K + + ++A E L +V D D Sbjct: 268 HGDNRGLILPPEIAPIQVVIVPIVNKNKEGILQEARKIENELKELYRVHLD---DRDNYT 324 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +F +L G PL++ +G + + +V + R Sbjct: 325 PGYKFYDWELKGVPLRLEIGPRDLEKGQVVLVRR 358 >gi|218895513|ref|YP_002443924.1| prolyl-tRNA synthetase [Bacillus cereus G9842] gi|228899114|ref|ZP_04063386.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222] gi|218542506|gb|ACK94900.1| prolyl-tRNA synthetase [Bacillus cereus G9842] gi|228860555|gb|EEN04943.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222] Length = 476 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|308513249|ref|YP_003474861.2| threonine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|307346955|gb|ADC90325.2| threonine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 646 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 94/402 (23%), Positives = 155/402 (38%), Gaps = 57/402 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + G +LP G + + RE R E+S P + + LW SG + Y Sbjct: 253 MFSEEGPGFPFFLPNGMILKNTLLDYWREVHRREDYREISTPIMLNRHLWETSGHWFHYR 312 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M +D+ P + F+S I SYR+LP ++ L R E G+ Sbjct: 313 DNMYTTV-IDDEDFAIKPMNCPGSMLTFKSTIHSYRDLPLRLAELGLVHRHEKSGVLHGL 371 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGD- 205 MR R F DA+ F +TP+ + ++ ++H K + R E +G D Sbjct: 372 MRVRAFTQDDAHIF-MTPDQIRDEIKRVVRLIDEVYHHFNFKYHIELSTRPEDS-MGTDE 429 Query: 206 ---LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDV 262 ++ E + LA D IP I E A Y D Sbjct: 430 EWNMATEALRLA------------VEDLKIPY------------VINEGDGAFYGPKLDF 465 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGI 319 H E DSL R + G I + LP A + G DG H + + + Sbjct: 466 HLE---DSL-------GRTWQCGTI---QLDFQLPQRFEAEYIGPDGNRHRPIVIHRVVL 512 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G++ ++ GK W +AP ++ +++I + C ++ A L G Sbjct: 513 GSIERFIGILIEHLAGKFPTW---LAPVQVRILSISDNQN---SYCSELLAELKNAGIRA 566 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +DD E+IG + A + P +I+G + +++ +V ++ R Sbjct: 567 EFDDRNEKIGFKVRAAQVEKIPYMLIIGDQEMNEHRVSLRLR 608 >gi|138896280|ref|YP_001126733.1| threonyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|134267793|gb|ABO67988.1| Threonyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] Length = 649 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 97/435 (22%), Positives = 184/435 (42%), Gaps = 38/435 (8%) Query: 6 YFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 ++L +L+E RD +L L T + +G+ WLP G + I +++ Sbjct: 233 HYLQLLEEAKERDHRKLGKELELFTTS-QKVGQGLPLWLPKGATIRRLIERYIVDKEIAL 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P L S +L+ SG +D Y + M + +++ ++ P + I++S + S Sbjct: 292 GYDHVYTPVLGSVELYKTSGHWDHYKENMFPPMEMDNEELVLRPMNCPHHMMIYKSKLHS 351 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ R E+ G+ R R + DA+ F + P+ K + ++ L Sbjct: 352 YRELPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIF-VRPDQIKDEFKRVVNLILE 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ GL R LS+ D + + + D M + D + Sbjct: 411 VYKDFGLDEYSFR---------LSYR-----DPQDKEKYYDDDEMWEKAQRMLREAMDEL 456 Query: 244 SLNSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 L+ E A Y DV ++ +L +++ +S ++ F ++ L T+ Sbjct: 457 GLDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFDL----TY 505 Query: 303 KGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK H + G+ + R VA +IE KG +P +AP ++ +I + + + Sbjct: 506 IGEDGKPHRPVVIHRGVVSTMERFVAFLIEEY---KG-AFPTWLAPVQVEVIPVSSEAHL 561 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ L G V D+ E+IG + A + P ++VG K ++ V ++ Sbjct: 562 --DYAYEVKQALQVNGFRVEVDERDEKIGYKIREAQMQKIPYMLVVGDKEAAERAVNVRR 619 Query: 421 RLTGIREDMSLEEVI 435 E ++L++ I Sbjct: 620 YGEKESETVALDKFI 634 >gi|15594747|ref|NP_212536.1| prolyl-tRNA synthetase [Borrelia burgdorferi B31] gi|13633966|sp|O51363|SYP_BORBU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|2688299|gb|AAC66767.1| prolyl-tRNA synthetase (proS) [Borrelia burgdorferi B31] Length = 488 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 96/428 (22%), Positives = 171/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L + L E D + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDVYKRF------------------------IEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG++ P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVDALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTISRR 365 >gi|195942244|ref|ZP_03087626.1| prolyl-tRNA synthetase [Borrelia burgdorferi 80a] Length = 488 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 96/428 (22%), Positives = 171/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L + L E D + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDVYKRF------------------------IEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG++ P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVDALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTISRR 365 >gi|329767326|ref|ZP_08258851.1| threonyl-tRNA synthetase [Gemella haemolysans M341] gi|328836015|gb|EGF85706.1| threonyl-tRNA synthetase [Gemella haemolysans M341] Length = 647 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 87/386 (22%), Positives = 159/386 (41%), Gaps = 36/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + S DL++ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRRTIERYIVDKEVELGYDHVYTPIMGSKDLYITSGHWDHYQEDMFPPM 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + + M+ P + ++++ SYR LP ++ + R E G+ R R Sbjct: 322 EMDHETMVLRPMNCPHHMMVYKNERHSYRELPIRIAELGMMHRYEASGAVSGLQRVRGMT 381 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 + DA+ F + P+ K + + LG+K+ R LS+ D Sbjct: 382 LNDAHIF-VRPDQLKDEFKLTVGLIEEAYKDLGIKNFSYR---------LSYR-----DP 426 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENK 275 T+ + D M + D + L+ + E A Y DV E K Sbjct: 427 ENTEKYFDDDAMWNNAQQMLKETADELGLDYVEAEGEAAFYGPKLDVQVETAI-----GK 481 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSH 333 + + I++ F ++ L + G DGK H + GI + R+VA ++E Sbjct: 482 QETLSTIQLD--FLLPERFEL----EYIGEDGKAHRPVVIHRGIVSTMERMVAFLLEEY- 534 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 KG + P ++P ++ +I + ++ D ++I L K G V DD E++G + Sbjct: 535 --KGDL-PTWLSPNQVRIIPV--NNDYHYDYSKEIMQELKKAGVKVAIDDRDEKLGYKIR 589 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P +++G K V + V ++ Sbjct: 590 EAASKKIPYTLVIGDKEVENRNVNVR 615 >gi|224533003|ref|ZP_03673610.1| proline--tRNA ligase [Borrelia burgdorferi WI91-23] gi|225549051|ref|ZP_03770026.1| prolyl-tRNA synthetase [Borrelia burgdorferi 94a] gi|225549517|ref|ZP_03770483.1| prolyl-tRNA synthetase [Borrelia burgdorferi 118a] gi|224512063|gb|EEF82457.1| proline--tRNA ligase [Borrelia burgdorferi WI91-23] gi|225369794|gb|EEG99241.1| prolyl-tRNA synthetase [Borrelia burgdorferi 118a] gi|225370277|gb|EEG99715.1| prolyl-tRNA synthetase [Borrelia burgdorferi 94a] Length = 488 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 96/428 (22%), Positives = 171/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L + L E D + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDVYKRF------------------------IEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG++ P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVDALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTISRR 365 >gi|312148113|gb|ADQ30772.1| prolyl-tRNA synthetase [Borrelia burgdorferi JD1] Length = 488 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 96/428 (22%), Positives = 171/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L + L E D + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDVYKRF------------------------IEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG++ P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVDALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTISRR 365 >gi|229028244|ref|ZP_04184383.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1271] gi|228733080|gb|EEL83923.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1271] Length = 476 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 81/406 (19%), Positives = 160/406 (39%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ H L L + Sbjct: 153 LRTTEFLWQEGHTIHETAEESQ----------AETLHILNLYA----------------- 185 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 186 -----------SFC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQEHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E ++++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMDQL 376 >gi|221217681|ref|ZP_03589149.1| prolyl-tRNA synthetase [Borrelia burgdorferi 72a] gi|221192358|gb|EEE18577.1| prolyl-tRNA synthetase [Borrelia burgdorferi 72a] Length = 488 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 96/428 (22%), Positives = 171/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L + L E D + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDVYKRF------------------------IEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG++ P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVDALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTISRR 365 >gi|33862697|ref|NP_894257.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] gi|73919817|sp|Q7V8D2|SYT_PROMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33634613|emb|CAE20599.1| Threonyl-tRNA synthatase [Prochlorococcus marinus str. MIT 9313] Length = 640 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 93/416 (22%), Positives = 156/416 (37%), Gaps = 90/416 (21%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GMI H+KG + L Q IRE + E+ P + LW +SG ++ + Sbjct: 261 GMIFWHAKGWAIYQVLEQ--------YIRETLSLHDYQEIRTPQVVDRSLWEKSGHWEKF 312 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 +M N + I P + IF +KSYR+LP + R+E G Sbjct: 313 KDDMFTTTSENREYAI-KPMNCPCHVQIFNQGLKSYRDLPIRLAEFGSCLRNEPSGSLHG 371 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 +MR R F+ DA+ F T + +K ++ G S+ ++ + P +G D Sbjct: 372 LMRVRNFVQDDAHIF-CTELQVQEEVSKFIDLVFEVYRSFGFDSVLIKLSTRPEKRVGSD 430 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 E W A SD + Sbjct: 431 --------------------------------------------EIWDKSEKALSDALDA 446 Query: 266 K--LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGADGKD--- 309 K +D LP IE +G ++ GT +S+P + A++ D + Sbjct: 447 KGLAWDLLPGEGAFYGPKIEFSLKDCLGRVWQCGTIQVDFSMPERLGASYVAEDSQRRTP 506 Query: 310 ---HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDAC 365 H +GS+ R + +IE + G+ IW +AP ++ ++ I + Q C+D C Sbjct: 507 VMLHRAILGSF----ERFIGILIE-HYAGRLPIW---LAPVQVVVMGITDRNAQACQDIC 558 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +K+ A + D+ E+IG + L P +I+G K +V ++ R Sbjct: 559 KKLSALEYRTEVDL----RNEKIGFKVREHTLQRVPFLIIIGDKEQQSGEVAVRTR 610 >gi|187918269|ref|YP_001883832.1| prolyl-tRNA synthetase [Borrelia hermsii DAH] gi|119861117|gb|AAX16912.1| prolyl-tRNA synthetase [Borrelia hermsii DAH] Length = 491 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 91/422 (21%), Positives = 171/422 (40%), Gaps = 81/422 (19%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-LWVESGRYDSYGKEMLR 95 KG +P G + + +I+ ++ TG P L + L E + E+ Sbjct: 35 KGCMVIMPYGYAIWERIKSILDDKFKETGHENAYFPLLIPYEFLEREKEHVKGFSPELAV 94 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + + + ++ PT E ++ +++ IKSYR+LP Q R E R R +R Sbjct: 95 ITTAGGEELAEPLVLRPTSETIIWNMYSKWIKSYRDLPVKINQWANIIRWEKRTR-PFLR 153 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNK-MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 + EFL ++ ++ E +K + + +F+ L ++ R Sbjct: 154 TTEFLWQEGHT---AHETAKEALEETLFI--LNLYKRF---------------------- 186 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 + D VFC + +E F +S +I ++ Sbjct: 187 --VEDYLAIPVFCGQK-------TEREKFAGAVSTYTI--------------------EA 217 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 L ++K+ ++ G Y G ++ F+ G+ YV S+G+ + R++ A+I Sbjct: 218 LMQDKK----ALQAGTSHYLGLNFAKAFDVKFQNKKGEMDYVFATSWGV-STRLIGALIM 272 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK-------IYARLSKVGCDVFWD- 382 D KG+I P +AP +I ++ I D DA +K I+ L + V D Sbjct: 273 VHSDNKGLILPPKIAPIEIIIVPIFKRDG---DANQKILEYSIIIFNLLKEAKFRVELDR 329 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSK--FVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 D+ G +FA A+L G P+++ +GS F++ V + + + +S+EE+ + H Sbjct: 330 DVKNSPGFRFAAAELKGIPIRIEIGSNDIFMNCVTVARRDKDKNSKYQVSVEELSSKIRH 389 Query: 441 RF 442 Sbjct: 390 EL 391 >gi|224534632|ref|ZP_03675206.1| proline--tRNA ligase [Borrelia spielmanii A14S] gi|224514101|gb|EEF84421.1| proline--tRNA ligase [Borrelia spielmanii A14S] Length = 488 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 91/414 (21%), Positives = 166/414 (40%), Gaps = 85/414 (20%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G +++I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIHSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L L E D + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYGFLEKEKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVIRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDVYKRF------------------------IEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S S+ ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSV--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK YV S+G+ + R++ A+I D +G+I P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRYVFASSWGV-STRLIGALIMVHSDERGLILPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVG 407 D++ + D + + L K V D D+ G +F+ A+ G P+++ +G Sbjct: 298 DKINKKILDYSDCVVQALKKAEFRVEIDKDIRSSPGFRFSSAEFKGIPIRLEIG 351 >gi|149180875|ref|ZP_01859377.1| threonyl-tRNA synthetase [Bacillus sp. SG-1] gi|148851394|gb|EDL65542.1| threonyl-tRNA synthetase [Bacillus sp. SG-1] Length = 647 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 96/444 (21%), Positives = 177/444 (39%), Gaps = 62/444 (13%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +YFL + + R+ ++L L M + + G+ +L GQK + + + +R+ QN Sbjct: 234 EYFLFLEEAQKRNHRKLGNELEL--FMFSEEAPGMPFYLNNGQKIRNELESFLRQIQNSF 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + LW +SG ++ Y KE + ++ +D++ P + IF+ + S Sbjct: 292 DYEEVRTPIMMNRKLWEQSGHWEHY-KENMYFSEVDDQSFALKPMNCPGHMLIFKDKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G++R R F DA+ F +TP+ + Sbjct: 351 YRDLPIRMAEFGQVHRHEFSGALNGMLRVRTFCQDDAHIF-VTPDQIEEEITSALKLIDH 409 Query: 184 IFHRLGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G + R E + E + G + +K F Sbjct: 410 VYRTFGFNYDIELSTRPEDY-----MGEEALWDKAEGSLKNVLTKLGYSF---------- 454 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 SI E A Y D+H + D+L + + + ++ F K+ L Sbjct: 455 ------SINEGDGAFYGPKIDIH---IKDALKRSHQCATVQLD----FQMPEKFEL---- 497 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII-------WPDSVAPFKISLIN 353 HY+ + + + + AV S GI+ +P ++P ++S+I Sbjct: 498 ---------HYIDENNQKVRPVVIHRAVFGSIDRFLGILIEHFAGAFPVWLSPLQVSVIP 548 Query: 354 I--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + H Q CE+I +RL + G V D E++G + A + P ++VG K Sbjct: 549 VSKRHHGQY----CEEIRSRLKEEGLRVECDLREEKLGYKIREAQMKKAPYILVVGDKEQ 604 Query: 412 SDSKVEIKHRLTGIREDMSLEEVI 435 V ++ ++ LEE I Sbjct: 605 ESQTVNVRSYGEQNSQEEKLEEFI 628 >gi|288801214|ref|ZP_06406669.1| proline--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] gi|288331825|gb|EFC70308.1| proline--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] Length = 493 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 10/207 (4%) Query: 247 SIVEQWTA-PYAATSDVHNEKLFDSLP----ENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E+W A P +EK +L E + ++ G + G ++ T Sbjct: 199 TFAEKWMAVPVLQGVKSESEKFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAKSFDVT 258 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 F + K YV S+G+ + R++ A+I + D G++ P +AP ++ +I I ++ Sbjct: 259 FLNKENKAEYVWATSWGV-STRLIGALIMTHSDDNGLVLPPKLAPIQVVIIPIAKGEEQL 317 Query: 362 RDACEKIYARLSKV---GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 EK+ +SK+ G V +DD ++ G +FA +L G P+++++G + + + VE Sbjct: 318 SAITEKLQPVISKLRENGISVKFDDSDNKRPGFKFADYELKGVPVRLVMGGRDLESNTVE 377 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSN 444 I R T +E +SL + + N Sbjct: 378 IMRRDTLEKETVSLNGIAEHIIQLLDN 404 Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Query: 99 RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMK 158 R ++ +I PT E ++ + +++ IKS+R+LP Q R E+R R +R+ EFL + Sbjct: 116 RLEEELIIRPTSETIIWNTYKNWIKSWRDLPLMCNQWCNVMRWEMRTR-PFLRTSEFLWQ 174 Query: 159 DAYSFDLTPEGSKHSYNKMFVSY 181 + ++ T E + KM Y Sbjct: 175 EGHTAHATKEEAVEEARKMLSVY 197 >gi|258647088|ref|ZP_05734557.1| threonine--tRNA ligase [Prevotella tannerae ATCC 51259] gi|260853035|gb|EEX72904.1| threonine--tRNA ligase [Prevotella tannerae ATCC 51259] Length = 647 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 90/426 (21%), Positives = 155/426 (36%), Gaps = 89/426 (20%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + +R+ Q R G +E+ P + S +L+V SG Y YGK+ + Sbjct: 262 KGLPIWLPKGTVLRQQLMSFLRKIQKRFGYMEVITPHIGSKNLYVTSGHYAKYGKDSFQA 321 Query: 97 ADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ Y P + ++ SY++LP + +R E G+ R R Sbjct: 322 IHTPEEGEEYMLKPMNCPHHCAVYSWQPHSYKDLPLRIAEFGTVYRYEQSGELHGLTRVR 381 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K + ++ + +F L + Sbjct: 382 GFTQDDAHIF-CRPDQVKQEFLRVMDIIMIVFRALNFEQ--------------------- 419 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN--EKLFDSL 271 F+ ISL V++ Y + DV + E+ Sbjct: 420 -------------------------FEAQISLRDKVKR--EKYIGSDDVWDKAEQAIIEA 452 Query: 272 PENKRVSARGIEVGHIFYFGTK---------------------YSLP--MSATFKGADGK 308 E K + A+ IE G ++G K Y+LP + G D K Sbjct: 453 CEEKGLQAK-IEYGEAAFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFQLEYTGEDSK 511 Query: 309 DHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDAC 365 H V + G++ AV+ G +W PD IS + D Sbjct: 512 KHRPVMIHRAPFGSLERFTAVLIEHTGGHFPLWLMPDQCVILPIS--------ERFNDYA 563 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 K+ +L G D+ E++G + ++ P ++VG K +D V ++ + G Sbjct: 564 HKVKEQLEAAGIRANIDERNEKVGRKIRDNEMKHIPYLLVVGEKEQADGSVNVRKQGEGT 623 Query: 426 REDMSL 431 +E M++ Sbjct: 624 QETMTI 629 >gi|189219701|ref|YP_001940342.1| Prolyl-tRNA synthetase [Methylacidiphilum infernorum V4] gi|189186559|gb|ACD83744.1| Prolyl-tRNA synthetase [Methylacidiphilum infernorum V4] Length = 512 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 74/359 (20%), Positives = 143/359 (39%), Gaps = 85/359 (23%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 ++ PT E ++ F I+SYR+LP Q R E+RPR +R+ EFL ++ ++ Sbjct: 123 LVIRPTSETIIGAAFSRWIQSYRDLPLLINQWANVVRWEMRPRL-FLRTTEFLWQEGHTV 181 Query: 164 DLTPEGSKH---SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 +PE ++ S K++ ++R G ++P +++ + E++ Sbjct: 182 HASPEEARQEALSIVKLYEEFMR-----GYLALP----------------VIVGEKPESE 220 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F D + +L ++V+ + Sbjct: 221 RFPGAD--------------NTYTLEAMVQ---------------------------DRK 239 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++VG + G +S + F +GK + S+G+ + R++ +I + D G++ Sbjct: 240 AVQVGTSHFLGQNFSKANNIRFLDKEGKMQFAWTSSWGV-STRLIGTLIMAHGDDNGLVL 298 Query: 341 PDSVAPFKISLINI--KAHDQV--------CRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 P +VAP ++ ++ + K D+ EKI K+ +V +MG + S Sbjct: 299 PPTVAPLQVVILPLVKKEEDKTKILDFAHQIAGEIEKIDFAGEKLRVEVDKREMGGGVKS 358 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 + G PL+V +G + VS + +K R D L+E + F P L Sbjct: 359 WEWIKK--GVPLRVEIGPQEVSSRLLTVKRR------DKELKEREQFTFEGFLERLPAL 409 >gi|84999652|ref|XP_954547.1| prolyl-trna synthetase [Theileria annulata] gi|65305545|emb|CAI73870.1| prolyl-trna synthetase, putative [Theileria annulata] Length = 702 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 90/420 (21%), Positives = 168/420 (40%), Gaps = 57/420 (13%) Query: 24 KLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-LWV 81 ++++R+ MI + G Y +LP + N ++ + G P + + L Sbjct: 221 QVIIRSEMIEYYDISGCYIFLPSSYFIWETFNEWFNKQIKQRGVENCYFPMFVTKEKLEA 280 Query: 82 ESGRYDSYGKEMLRLADRND----KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQL 137 E + + E+ + D + PT E +M F I+S+R+LP Q Sbjct: 281 EKTHLEGFSPEVAWVTRNGDVDLPDPIAIRPTSETIMYPEFARWIRSHRDLPLKLNQWNS 340 Query: 138 KFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 R E + +RSREFL ++ ++ T + + + +M Sbjct: 341 VVRWEFKQPTPFIRSREFLWQEGHTAHTTEQEALDTVYEML------------------- 381 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 +L ++I++ + F ++++ P+ I + S E++ Sbjct: 382 -------NLYSKYILVINVLIMSRFY-EEYLSVPV---------IKGVKSENEKFAGSKM 424 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 TS L +P N RG++ GT +S ++ +G V S+ Sbjct: 425 TTS------LESFIPAN----GRGVQAATSHLLGTTFSDMFDIRYEDEEGVKQKVHQTSW 474 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKV 375 G R + +I D KG++ P VA ++ ++ I K +QV E ++ L++ Sbjct: 475 GFTT-RSIGIMIMVHGDDKGLVLPPRVAKVQVVIVPIMSKTAEQVMLRVNE-LFQLLTEA 532 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD G G +F +L G PL++ VG+K V ++ V + R + D+ LE + Sbjct: 533 GFRVKLDDRRGYTPGFKFNHWELRGVPLRLEVGAKDVENNTVRLVRRDNFAKSDVPLENL 592 >gi|228913143|ref|ZP_04076782.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846548|gb|EEM91561.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 502 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 62 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 121 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 122 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 178 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 179 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 212 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 213 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 248 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 249 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 297 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 298 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 356 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 357 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 402 >gi|163786094|ref|ZP_02180542.1| prolyl-tRNA synthetase [Flavobacteriales bacterium ALC-1] gi|159877954|gb|EDP72010.1| prolyl-tRNA synthetase [Flavobacteriales bacterium ALC-1] Length = 492 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 83/159 (52%), Gaps = 5/159 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ F +GK +V S+G+ + R++ A+I + D KG++ Sbjct: 235 KALQAGTSHFLGQNFAKAFDVKFTNNEGKLDHVWATSWGV-STRLMGALIMTHSDDKGLV 293 Query: 340 WPDSVAPFKISLINIKAHDQ---VCRDACEKIYARLSKVGCDVFWDDMG-EQIGSQFAVA 395 P ++APF++ ++ I +D+ + I L +G +D + G++FA Sbjct: 294 LPPNLAPFQVVIVPIYKNDEQFDLISKKANTISKELKALGVSCKFDKRSTHRPGAKFAQH 353 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +L G PL++ +G K + ++ VE+ R T +E + ++++ Sbjct: 354 ELQGVPLRIAIGPKDLENNTVELARRDTLTKEIVQMDDL 392 Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D GK + + ++ +I PT E ++ + ++ I+SYR+LP Q R E+R R Sbjct: 102 DKEGKLRVDPNAKLEEELIVRPTSEAIIWNTYKGWIQSYRDLPILINQWANVVRWEMRTR 161 Query: 147 FGVMRSREFLMKDAYS 162 +R+ EFL ++ ++ Sbjct: 162 L-FLRTAEFLWQEGHT 176 >gi|297156878|gb|ADI06590.1| prolyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1] Length = 471 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 89/461 (19%), Positives = 184/461 (39%), Gaps = 82/461 (17%) Query: 1 MRRSKYFLPILQENPR-------DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 M ++ P ++ PR AE+A + + T +I + G++ ++ ++ Sbjct: 1 MAKAPVLTPQAEDFPRWYQDLINKAELADNGPVRGTMVIRPYGYGLW------ERMQQDM 54 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPT 109 +A I+ E + + +P + L E+ + + E+ + K + + PT Sbjct: 55 DARIKAEGVQNAYFPLFIP---QSYLTKEAEHVEGFAPELAIVTHGGGKKLEEPVVVRPT 111 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEG 169 E ++ + F ++SYR+LP Q R ELRPR +R+ EFL ++ ++ T E Sbjct: 112 SETIINEYFAKWVQSYRDLPLLINQWANVVRWELRPRL-FLRTSEFLWQEGHTAHATYED 170 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 ++ +++ HR V+ DFM+ Sbjct: 171 ARDFASRI--------HR--------------------------------HVYA--DFME 188 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 ++++++ ++ + TA ++ L E + +++G Sbjct: 189 -----------NVLAMDVVLGRKTAKERFAGAINTLTL-----EGMMGDGKALQLGTSHE 232 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G ++ + F +GK V S+G R+V A++ D G+ P +AP + Sbjct: 233 LGQNFARAFNTQFLSKEGKQELVWQTSWG-STTRMVGALVMMHGDDSGLRIPPRLAPVQA 291 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV-ADLLGFPLQVIVGS 408 ++ IK D+ +I RL+ G V DD + + AV +L G P+++ VG Sbjct: 292 VVLAIKG-DEAVLAKVREIGDRLTAAGVRVQVDDRTDTPFGRRAVDWELKGVPVRIEVGP 350 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 + + + R+ G +E + LE + + ++ +L Sbjct: 351 RDLEGGTAMVVRRIPGGKEPVRLEALPDLLPKVLEEDQALL 391 >gi|71282219|ref|YP_269610.1| threonyl-tRNA synthetase [Colwellia psychrerythraea 34H] gi|123747383|sp|Q480A9|SYT_COLP3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71147959|gb|AAZ28432.1| threonyl-tRNA synthetase [Colwellia psychrerythraea 34H] Length = 636 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 89/426 (20%), Positives = 160/426 (37%), Gaps = 45/426 (10%) Query: 17 DAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + +T + H + + G+ W G + IRE+ + E+ P Sbjct: 238 EAEKRDHRKIGKTLDLFHWQEEAPGMVFWHNDGWTIYTELEKFIREKLHEYDYDEVKAPM 297 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG +D Y M + I P + IF +KSYR+LP Sbjct: 298 MMDRSLWEKSGHWDKYADGMFTTTSEKREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRIA 356 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F DA+ F + + + K ++ G + Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCMESQ-VQAEVKKCIEMVYDVYGSFGFED 415 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 + ++ + P S E A+ G Q + +P E + I Sbjct: 416 VVVKLSTRPDNRIGSDEIWDKAEAGLAQALTDSNIAFEYLPGEGAFYGPKIEFT------ 469 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDH 310 L D L R + G + ++LP + AT+ G D + + Sbjct: 470 --------------LMDCL-------GRAWQCGTV---QLDFALPERLGATYVGEDNERY 505 Query: 311 YVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 M I G++ ++ GK +P ++P + +++NI CEK+ Sbjct: 506 TPVMIHRAILGSLERFIGILIEEFTGK---FPTWLSPIQTTIMNITDKQA---PYCEKVV 559 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +L + G D E+IG + L P ++VG K + ++ ++ R M Sbjct: 560 KKLKENGFRAKIDLRNEKIGFKIREHTLKRVPYLLVVGDKEMESGEISVRTRSGEDLGKM 619 Query: 430 SLEEVI 435 S+++ I Sbjct: 620 SVDDFI 625 >gi|58700004|ref|ZP_00374566.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|58533480|gb|EAL57917.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] Length = 342 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 4/172 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G W G + + + IR++ G E+ P L S +LW +SG +D + + Sbjct: 6 IQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWEKSGHWDKFRE 65 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + K + P + IF SH +SYR+LP + R+E G+M Sbjct: 66 NMFIVDESESKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLM 125 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP 201 R R F DA+ F + E +S F L+ ++ LG I ++ P Sbjct: 126 RVRGFTQDDAHIFCM--EEQVNSETIKFCDLLKEVYSELGFNEISVKFSDRP 175 >gi|319902630|ref|YP_004162358.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Bacteroides helcogenes P 36-108] gi|319417661|gb|ADV44772.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Bacteroides helcogenes P 36-108] Length = 646 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 96/432 (22%), Positives = 161/432 (37%), Gaps = 73/432 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L++ SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K + LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPDQVKDEF-------LRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S DF +F D ++ + + E W A + EK Sbjct: 410 --------VFQSMDFENF---EAQISLRDKVNRDKYIGSDENWEKAEQAIIEACEEKGLK 458 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + GAD + H V + Sbjct: 459 ARIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMVH 518 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W PD VA IS + D +++ L Sbjct: 519 RAPFGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNDYAQEVKLFL 569 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 K D+ E+IG + ++ P ++VG K + ++ ++ + G + M +E Sbjct: 570 KKYDIRAIVDERNEKIGRKIRDNEMKRIPYMLVVGEKEAENKEIAVRKQGEGDKGTMKIE 629 Query: 433 EVINYASHRFSN 444 E S N Sbjct: 630 EFAKKISEEVQN 641 >gi|259502210|ref|ZP_05745112.1| threonine-tRNA ligase [Lactobacillus antri DSM 16041] gi|259169828|gb|EEW54323.1| threonine-tRNA ligase [Lactobacillus antri DSM 16041] Length = 600 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 84/403 (20%), Positives = 154/403 (38%), Gaps = 35/403 (8%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I + + G + P L + D + SG ++ Y +M Sbjct: 216 GLPYWMPKGATIRRTIERYIIDREVADGYEHVYTPVLMNLDAYKTSGHWEHYRDDMFPPM 275 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 276 DMGDGEMLEIRPMNCPSHIQIYKHHIRSYRDLPMRIAELGMMHRYEKSGALSGLQRVREM 335 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R + L D Sbjct: 336 TLNDGHTF-VAVDQIRDEFAKILNLIMDVYKDFDITDYSFR--------------LSLRD 380 Query: 216 TGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + + D M D DD+ E A Y D+ + +L + Sbjct: 381 PKNKEKYYGNDEMWDESQKLLKAAMDDLNLDYYEAEGEAAFYGPKLDIQTKT---ALGND 437 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ FG Y G DGK+H M GI G M A + + Sbjct: 438 ETMSTIQLDFMQPDRFGLSYV--------GKDGKEHMPVMIHRGIVGTMERFVAYLTEIY 489 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++ +I + D+ D +++ ++ V DD E++G + Sbjct: 490 KGAFPTW---LAPEQVHIIPVS--DEKHGDYAKQLADKMKAAQIRVVVDDRNEKMGYKIR 544 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A P ++VG V D+ V ++ + MS + +N Sbjct: 545 EAQTQKVPYTLVVGDDEVKDNAVSVRKYGEEAQNSMSQDAFMN 587 >gi|212638370|ref|YP_002314890.1| threonyl-tRNA synthetase [Anoxybacillus flavithermus WK1] gi|226701399|sp|B7GGN9|SYT_ANOFW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|212559850|gb|ACJ32905.1| Threonyl-tRNA synthetase [Anoxybacillus flavithermus WK1] Length = 643 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 89/404 (22%), Positives = 167/404 (41%), Gaps = 36/404 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S +L+ SG +D Y M Sbjct: 264 QGLPLWLPKGATIRRTIERYIVDKELSLGYQHVYTPVLGSVELYKTSGHWDHYKDGMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + +++ I SYR LP ++ R E+ G+ R R Sbjct: 324 MEMDNEQLVLRPMNCPHHMMVYKHKIHSYRELPIRIAELGTMHRYEMSGALTGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ L ++ GL R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKDEFKRVVNLILDVYKDFGLTDYSFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M S + D + L+ E A Y DV ++ +L ++ Sbjct: 429 PQDKEKYYDDDAMWEKAQSMLKEAMDELGLDYYEAEGEAAFYGPKLDV---QVRTALGKD 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPERFDL----TYIGEDGKPHRPVVIHRGVVSTMERFVAFLIEEY 537 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ +I + + D ++ L G V D+ E+IG + Sbjct: 538 ---KG-AFPTWLAPIQVQVIPVAP--SIHMDYAYEVKHALQVAGIRVEVDEREEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A + P ++VG V++ V ++ E M L+ ++ Sbjct: 592 REAQMQKIPYMLVVGDNEVNERAVNVRKYGEQKSETMPLDAFVD 635 >gi|33240514|ref|NP_875456.1| threonyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|73919816|sp|Q7VBM8|SYT_PROMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33238042|gb|AAQ00109.1| Threonyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 643 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 99/449 (22%), Positives = 173/449 (38%), Gaps = 45/449 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L I + RD KL L + + G+ W P G + + IRE Sbjct: 231 YLLKIEEAEKRDHRKIGKKLDL--FHTQEEAPGMIFWHPKGWSIYQVLESFIRETLILND 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P LW +SG +D + ++M N + I P + +F +KSY Sbjct: 289 YKEIKTPQTVDRSLWEKSGHWDKFKEDMFTTTSENREYAI-KPMNCPCHIQVFNEGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F T + +K + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGALHGLMRVRNFVQDDAHIF-CTEAQIQDEVSKFIDLVFDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII- 243 + G +SI ++ + P S E ++ K F +P E + I Sbjct: 407 YKAFGFESIIIKLSTRPTKRVGSDEIWDKSEKALADALNIKKFEWSYLPGEGAFYGPKIE 466 Query: 244 -SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 SL +++ D S+P R+ A I+ ++ +P+ Sbjct: 467 FSLKDCIDRVWQCGTIQVDF-------SMPH--RLGASYIDE------NSQKKVPVML-- 509 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 H +GS+ R + +IE ++GK +P ++P ++ +I I + + Sbjct: 510 -------HRAILGSFE----RFIGILIE-EYEGK---FPPWLSPIQVIVIGITDRNSI-- 552 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK--H 420 C++I L G +D E++G + L P +I+G K + V ++ H Sbjct: 553 -KCKEISNLLMLRGYRATYDTRNEKVGLKIREHTLQRIPYLLIIGDKEQEEGTVSVRTMH 611 Query: 421 RL-TGIREDMSLEEVINYASHRFSNNRPV 448 + G + +E+IN A N +PV Sbjct: 612 GIDMGSMKLTEFQEIINEAISLKGNYKPV 640 >gi|254724859|ref|ZP_05186642.1| prolyl-tRNA synthetase [Bacillus anthracis str. A1055] Length = 510 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|115372906|ref|ZP_01460211.1| prolyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|115370173|gb|EAU69103.1| prolyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 423 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 73/330 (22%), Positives = 134/330 (40%), Gaps = 76/330 (23%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ F I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 47 EEPLVIRPTSETIINRSFAKWIQSYRDLPLLINQWANVMRWEMRTRL-FLRTTEFLWQEG 105 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T ++ +M Y R F Sbjct: 106 HTCHETEADAEKETLQMLEVY-RTF----------------------------------- 129 Query: 221 VFCSKDFMDFPI----PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 ++D+M P+ SE F + SI +++ ++K+ Sbjct: 130 ---AEDYMAMPVLTGRKSETERFAGALRTYSI--------------------EAMMQDKK 166 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 ++ G G ++ F+G DGK H+V S+G+ + R++ +I + D Sbjct: 167 ----ALQAGTSHNLGQNFAKAFDTQFQGRDGKQHHVWQTSWGV-STRLIGGLIMTHSDDA 221 Query: 337 GIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYAR---LSKVGCDVFWDDMGEQI-GS 390 G++ P +AP + +I I KA D EK++A L + G +V DD + G Sbjct: 222 GLVVPPRLAPTHVVIIPILGKAADAEKTQVLEKVHAMAADLRRAGLNVLVDDDDTKSPGF 281 Query: 391 QFAVADLLGFPLQVIVGSK-FVSDSKVEIK 419 ++ +++G L+V +G K DS V ++ Sbjct: 282 KYNEHEVVGTCLRVELGPKDLAKDSCVMVR 311 >gi|145220122|ref|YP_001130831.1| prolyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265] gi|259511614|sp|A4SFS0|SYP_PROVI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145206286|gb|ABP37329.1| prolyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265] Length = 481 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 69/330 (20%), Positives = 135/330 (40%), Gaps = 63/330 (19%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ I+SYR+LP Q R E+R R +R+ EFL ++ ++ TP Sbjct: 108 PTSETIIWSSYKKWIQSYRDLPLLINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHATP 166 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E S+ +M +R++ + + M +++ +++ F D Sbjct: 167 EESQEEVMRM----IRVYKTFAEEYMAMP--------------VIMGRKTDSEKFAGAD- 207 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + + ++++ A A TS HN Sbjct: 208 -------------ETYCIEAMMQDGKALQAGTS--HN----------------------- 229 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 G ++ F+ +G YV S+G+ + R++ A+I + D +G++ P +A Sbjct: 230 --LGQNFAKAFDCQFQTKEGVLDYVWATSWGV-STRLIGALIMAHSDDRGLVLPPKLATR 286 Query: 348 KISLINIKAHDQVCRDA-CEKIYARLSKVGCDVFWDDMGEQI-GSQFAVADLLGFPLQVI 405 ++ +I I D+ A E + A L + G F DD + G +FA +L G P+++ Sbjct: 287 QVVIIPILRGDKAAVLAKAESMAAELKENGIPAFVDDSEQNSPGWKFAEYELQGIPVRIE 346 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 VG + + R T + ++ L+ + Sbjct: 347 VGPRDIDKGVCIAARRDTLEKTELQLDATL 376 >gi|92113922|ref|YP_573850.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Chromohalobacter salexigens DSM 3043] gi|123387452|sp|Q1QWK7|SYT_CHRSD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91797012|gb|ABE59151.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Chromohalobacter salexigens DSM 3043] Length = 632 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 91/425 (21%), Positives = 157/425 (36%), Gaps = 51/425 (12%) Query: 5 KYFLPILQENPRDAEIASHKLMLRT---GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L L+E AE H+ + R + + + G+ W P G V +R Sbjct: 229 KTYLKRLEE----AEKRDHRKLARKLDFFHMQEEAPGMVFWHPRGWTLWQTVEQYMRGVY 284 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +G E+ P + LW +SG +D+Y + M + + P + +F S Sbjct: 285 KDSGYQEIRCPQIMDVSLWQKSGHWDNYAENMF-FTESEKREYALKPMNCPGHVQVFNSG 343 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP + + R+E G+MR R F D + F T E + Sbjct: 344 LRSYRELPVRYGEFGGCHRNEPSGALHGIMRVRAFTQDDGHVF-CTEEQIEPEVTAFHRQ 402 Query: 181 YLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G I ++ P +G D + + A+ D +P E Sbjct: 403 ALAVYRDFGFDDIAVKIALRPEKRLGSDDNWD---RAEEALRNALSRCDVEWEELPGEG- 458 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 A Y + H + D L +V ++ F T+ Sbjct: 459 ----------------AFYGPKIEYH---MRDCLGREWQVGTMQVD----FMMPTR---- 491 Query: 298 MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A + DG + V + +G+M ++ + G +W ++P + ++NI Sbjct: 492 LGAQYVAEDGSRQAPVMLHRAIVGSMERFIGILIEHYAGSMPLW---LSPLQAVVLNIT- 547 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+ E + RL K G V D E+IG + L P ++VG K V V Sbjct: 548 --DAQREYAESVTQRLQKSGLRVKTDLRNEKIGFKIREHTLQKIPYLLVVGDKEVEAGAV 605 Query: 417 EIKHR 421 ++ R Sbjct: 606 AVRTR 610 >gi|330995385|ref|ZP_08319295.1| threonine--tRNA ligase [Paraprevotella xylaniphila YIT 11841] gi|329575880|gb|EGG57404.1| threonine--tRNA ligase [Paraprevotella xylaniphila YIT 11841] Length = 647 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 92/428 (21%), Positives = 152/428 (35%), Gaps = 65/428 (15%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +++ Q R G ++ P + +L+V SG Y YGK+ + Sbjct: 261 GKGLPMWLPKGTALRLRLEDFLKKIQKRYGYQQVMTPHIGGKNLYVTSGHYAHYGKDSFQ 320 Query: 96 L--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 D+ + P + +I+ +SY++LP + +R E G+ R Sbjct: 321 PIHTPEADEEYMLKPMNCPHHCEIYAWKPRSYKDLPLRIAEFGTVYRYEQSGELHGLTRV 380 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K + ++ IF G + D I Sbjct: 381 RSFTQDDAHIF-CRPDQVKDEFIRVMEIIQIIF--------------GALNFDTFEAQIS 425 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 L D + + D E W A + EK ++ Sbjct: 426 LRDPNNREKYIGSD-----------------------EVWEEAENAIIEACKEKGLNAKV 462 Query: 273 ENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYG 318 E + G + +G + GT Y+LP + G D + H V + Sbjct: 463 EYGEAAFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFKLEYTGEDNQKHRPVMIHRAP 522 Query: 319 IGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G+M AV+ G +W PD VA IS + D K+ A + Sbjct: 523 FGSMERFCAVLIEHTAGHFPLWLTPDQVAILPIS--------EKFNDYAHKLCAYFDERD 574 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DD E+IG + ++ P +IVG K +D V ++ + G + M E+ Sbjct: 575 VRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAADGTVSVRKQGEGDQGSMKFEDFAK 634 Query: 437 YASHRFSN 444 + N Sbjct: 635 KINEEVRN 642 >gi|218235284|ref|YP_002365239.1| prolyl-tRNA synthetase [Bacillus cereus B4264] gi|229148794|ref|ZP_04277043.1| Prolyl-tRNA synthetase 2 [Bacillus cereus m1550] gi|218163241|gb|ACK63233.1| proline--tRNA ligase [Bacillus cereus B4264] gi|228634682|gb|EEK91262.1| Prolyl-tRNA synthetase 2 [Bacillus cereus m1550] Length = 476 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSKAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ A + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQAHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E + ++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQL 376 >gi|169334538|ref|ZP_02861731.1| hypothetical protein ANASTE_00941 [Anaerofustis stercorihominis DSM 17244] gi|169259255|gb|EDS73221.1| hypothetical protein ANASTE_00941 [Anaerofustis stercorihominis DSM 17244] Length = 637 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 100/419 (23%), Positives = 163/419 (38%), Gaps = 56/419 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI + G +LP G + + REE + G E+ P + + LW SG +D Y Sbjct: 255 MICEEGPGFPFFLPKGMVIRNELENFWREEHRKRGYQEIKTPLILNEQLWHTSGHWDHYK 314 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M D ND A+ P + +++ + SYR+LP ++ R EL G Sbjct: 315 DNMYFTRIDDNDYAI--KPMNCPGSMLVYKRKMWSYRDLPLRIGEMGQVHRHELSGALHG 372 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKM--FVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 +MR R F DA+ F + PE K + F+ Y +++ G K + + P Sbjct: 373 LMRVRTFTQDDAHIF-MLPEQIKEEVIGVIDFIDY--VYNMFGFK-YHVELSTRPDDSMG 428 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 S E +A + K MD+ + + F Y D H E Sbjct: 429 SDEDWNMATEALREAMEEKG-MDYVVNEGDGAF----------------YGPKLDFHLED 471 Query: 267 LFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM 322 R + G I F ++ L T+ G DG+ H V + G++ Sbjct: 472 CL----------GRTWQCGTIQLDFQMPQRFDL----TYIGHDGEKHRPVMIHRVIFGSI 517 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ G +W +AP + LI I + + + I +L + G D Sbjct: 518 ERFIGILTEHFAGAFPLW---LAPVQAKLIPITDRNL---EYVKGIKDKLEQKGIRCEID 571 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED---MSLEEVINYA 438 D E++G + A L P +I G + + + + ++ R G ED MS++E IN A Sbjct: 572 DRSEKMGYKIREAQLEKVPYMIIAGDRDMENGVISVRARKDG--EDLGAMSVDEFINKA 628 >gi|305664643|ref|YP_003860930.1| threonyl-tRNA synthetase [Maribacter sp. HTCC2170] gi|88707344|gb|EAQ99590.1| threonyl-tRNA synthetase [Maribacter sp. HTCC2170] Length = 646 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 90/433 (20%), Positives = 160/433 (36%), Gaps = 67/433 (15%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T + +G+ WLP G + + +++ Q + G Sbjct: 231 YLQLLEEAKKRDHRKLGKELELFT-FSQKVGQGLPLWLPKGAALRERLEQFLKKAQKKAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +L+V SG Y YG++ + ++D+ + P + +I+ S Sbjct: 290 YEMVVTPHIGQKELYVTSGHYAKYGEDSFQPIHTPKDDEEFLLKPMNCPHHCEIYNSRPF 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP + + +R E G+ R R F DA+ F TP+ + + L Sbjct: 350 SYRELPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CTPDQLDQEFKDVIDLSL 408 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + LG F +F D D Sbjct: 409 YVLSSLG-------------------------------------FENFKAQVSVRDLDTP 431 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT-- 292 VE W A + EK D + E+ + G + +G + GT Sbjct: 432 EKYIGSVENWEKAENAIINAAKEKGLDFVVESGEAAFYGPKLDFMVKDALGRNWQLGTIQ 491 Query: 293 -KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIW--PDSVAP 346 Y+LP T+KG+D + H V + G+M A++ G +W P+ Sbjct: 492 VDYNLPERFDLTYKGSDNESHRPVMIHRAPFGSMERFVALLLEHTGGNFPLWLIPEQAII 551 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 +S + H++ EK+ L D+ E +G + A++ P +IV Sbjct: 552 LPVS----EKHEKY----AEKVLNSLENNEIRALIDNRNETVGKKIREAEMGKLPFMLIV 603 Query: 407 GSKFVSDSKVEIK 419 G ++ + ++ Sbjct: 604 GESEEENNTIAVR 616 >gi|121594741|ref|YP_986637.1| threonyl-tRNA synthetase [Acidovorax sp. JS42] gi|166223314|sp|A1W8I6|SYT_ACISJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120606821|gb|ABM42561.1| Ser-tRNA(Thr) hydrolase [Acidovorax sp. JS42] Length = 639 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 89/391 (22%), Positives = 151/391 (38%), Gaps = 56/391 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I +HS G W P G V +R G E+ P + LW ++G +D Y Sbjct: 255 IDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQILDKTLWEKTGHWDKYRD 314 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M +++ D A+ P + IF+ IKSYR+LP + + R+E G+ Sbjct: 315 NMFTTESEKRDYAL--KPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGD 205 MR R F D + F E + + + L +++ G +I + + P IG D Sbjct: 373 MRVRGFTQDDGHIF--CTEDHILAECTAYTALLQKVYKDFGFHNIIYKVATRPEARIGSD 430 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 S D E + S + + +F+ AP + Sbjct: 431 ES------WDKAEHALMES-------LRASGCEFE------------IAP--GDGAFYGP 463 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 K+ +L + +G + GT +S+P + A + G DG H V + + Sbjct: 464 KIEYTLKDA---------IGRQWQCGTMQVDFSMPERLDAEYVGEDGGRHRPVMLHRAIV 514 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCD 378 G++ ++ H G +W +AP +++++NI A CR+ K+ L G Sbjct: 515 GSLERFIGILIEEHAGALPVW---LAPVQVAVLNITDAQQDYCREIAAKLQKALPNQGLR 571 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 V D E+I + L P ++ G K Sbjct: 572 VVTDLRNEKITYKIREHSLQKLPYILVAGDK 602 >gi|262281009|ref|ZP_06058792.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] gi|262257909|gb|EEY76644.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] Length = 640 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 86/415 (20%), Positives = 158/415 (38%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +Y Sbjct: 255 MQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTLWEKSGHAANYAD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSESRNYAV-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGQEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L++ +W + K+ Sbjct: 431 ----ALWDMAE------KSLAD--------------ALDAAGLEWEL-QPGEGAFYGPKI 465 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP + A++ D +D V + +G+ Sbjct: 466 EFSLKDC---------LGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P ++P + ++NI +ACEK+ A+L + G Sbjct: 517 FERFIGILIEHYAG---FMPPWLSPLQACVMNITDSQA---EACEKVVAKLKENGLRAIS 570 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P +++G + V + V ++ R MS++ I+ Sbjct: 571 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFID 625 >gi|326335459|ref|ZP_08201646.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692225|gb|EGD34177.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 492 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 73/352 (20%), Positives = 142/352 (40%), Gaps = 65/352 (18%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GK ++ + ++ +I PT E ++ + +++ I+SYR+LP Q R E+R R Sbjct: 105 GKLIVDPEAKLEEELIVRPTSEAIIWNTYKNWIQSYRDLPILINQWANVVRWEMRTRL-F 163 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E + KM Y + +P Sbjct: 164 LRTAEFLWQEGHTAHATREEAIEEAQKMNEVYATFVEQ--YMGVP--------------- 206 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 ++ E + F DD + ++++ A A TS Sbjct: 207 -VIRGRKTEAERFAGA--------------DDTYCIEALMQDGKALQAGTS--------- 242 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 + G ++ + +G YV S+G + R++ A+I Sbjct: 243 ------------------HFLGQNFAKAFEVKYANKEGVLDYVWASSWG-SSTRLMGALI 283 Query: 330 ESSHDGKGIIWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDV-FWDDMG 385 S D G++ P +AP ++ ++ I K +Q+ R + L K V F DD Sbjct: 284 MSHSDDNGLVLPPLLAPIQVVIVPIYKGEEQLQSIRQRITPLMQALKKHEITVKFDDDDT 343 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ G +F +L G P+++ VG + + ++ E+ R T +E +S E ++ + Sbjct: 344 QKPGFKFHEYELKGVPIRLAVGQRDLENNTYEVARRDTLTKESISGERIVEH 395 >gi|30018647|ref|NP_830278.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|229125889|ref|ZP_04254914.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4] gi|81435975|sp|Q81IE9|SYP2_BACCR RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA ligase 2; Short=ProRS 2 gi|29894188|gb|AAP07479.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|228657547|gb|EEL13360.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4] Length = 476 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ A + KV V D + Sbjct: 272 IMVHSDNNGLVLPPKVAPVQVVIVPIAQHKEGVLAKATELQAHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E + ++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQL 376 >gi|327481051|gb|AEA84361.1| threonyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166] Length = 640 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 6/177 (3%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W P G N+ +R+ Q G E+ P + LW +SG + +Y + Sbjct: 256 QEEAPGMVFWHPAGWTLYQNLEQYMRQVQRENGYQEVRTPQVVDRILWEKSGHWSNYAEN 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + N + P + IF +KSYR+LP + R+E G+MR Sbjct: 316 MFTTSSENRDYAV-KPMNCPCHVQIFNQGLKSYRDLPLRMAEFGACHRNEPSGALHGIMR 374 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R F DA+ F T E K L+++ G I M+ + P +G D Sbjct: 375 VRGFTQDDAHIF-CTEEQVKKEAADFIKLTLKVYADFGFSDIAMKLSTRPAKRVGSD 430 >gi|58700192|ref|ZP_00374690.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|58533291|gb|EAL57792.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] Length = 246 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 7/204 (3%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 R+K L E ++AE H+ + + I + + G W G + + + IR+ Sbjct: 11 RNKDELNAYLECLKEAEKRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRK 70 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 + G E+ P L S +LW +SG +D + + M + + K + P + IF Sbjct: 71 KLINNGYFEVKTPILVSKELWEKSGHWDKFRENMFIVDESESKKLAIKPMNCPCHVQIFN 130 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 SH +SYR+LP + R+E G+MR R F DA+ F + E +S F Sbjct: 131 SHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCM--EEQVNSETIKF 188 Query: 179 VSYLR-IFHRLGLKSIPMRAESGP 201 L+ ++ LG I ++ P Sbjct: 189 CDLLKEVYSELGFNEISVKFSDRP 212 >gi|146282712|ref|YP_001172865.1| threonyl-tRNA synthetase [Pseudomonas stutzeri A1501] gi|166225484|sp|A4VM22|SYT_PSEU5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145570917|gb|ABP80023.1| threonyl-tRNA synthetase [Pseudomonas stutzeri A1501] Length = 640 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 6/177 (3%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W P G N+ +R+ Q G E+ P + LW +SG + +Y + Sbjct: 256 QEEAPGMVFWHPAGWTLYQNLEQYMRQVQRENGYQEVRTPQVVDRILWEKSGHWSNYAEN 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + N + P + IF +KSYR+LP + R+E G+MR Sbjct: 316 MFTTSSENRDYAV-KPMNCPCHVQIFNQGLKSYRDLPLRMAEFGACHRNEPSGALHGIMR 374 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R F DA+ F T E K L+++ G I M+ + P +G D Sbjct: 375 VRGFTQDDAHIF-CTEEQVKKEAADFIKLTLKVYADFGFSDIAMKLSTRPAKRVGSD 430 >gi|290889941|ref|ZP_06553027.1| hypothetical protein AWRIB429_0417 [Oenococcus oeni AWRIB429] gi|290480383|gb|EFD89021.1| hypothetical protein AWRIB429_0417 [Oenococcus oeni AWRIB429] Length = 663 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 90/410 (21%), Positives = 168/410 (40%), Gaps = 43/410 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + E++ + + + P + + DL+ SG +D Y +M Sbjct: 267 GLPVWLPNGAAIRRTIEDYLVEKERQNSYMNVYTPVVSNLDLYKRSGHWDHYRDDMFPAM 326 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI-QLKFRDELRPRFGVMRSREF 155 +D + + P + +IF +SYR+LP+ + Q+ ++ G+ R RE Sbjct: 327 TADDGEQLELRPMNCPSHIEIFEHEPRSYRDLPYRIAEFGQMHRWEKSGALTGLSRVREM 386 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF-IVLA 214 + D ++ + PE + + + ++H G D + F + Sbjct: 387 TLNDGHTV-VAPEQVEPEFKGILQLIRDVYHDFGFT-------------DQDYRFRLSYR 432 Query: 215 DTGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D T+ + D M + + DD+ E A Y D+ + +L Sbjct: 433 DPKNTKKYYDDDAMWEHAQAALKRAMDDMGLDYFEAEGEAAFYGPKLDI---QFKTALGN 489 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESS 332 + +S ++ F KY+ G DGKDH + G +G M A + Sbjct: 490 EETMSTIQLDFLLPERFDMKYT--------GEDGKDHRPVLIHRGVVGTMERFVAFLIEK 541 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G+ W +AP + +I N AH R+ IY++L K G + D+ E++G Sbjct: 542 YKGQFPTW---LAPVQAVVIPVNYGAHGDYARN----IYSKLMKDGRRIKLDNRDEKLGY 594 Query: 391 QFAVADL-LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL---EEVIN 436 A + L P ++VG + + D+ V ++ R + ++M + EE+IN Sbjct: 595 LIRDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTKEMKIDEFEEMIN 644 >gi|196040211|ref|ZP_03107513.1| proline--tRNA ligase [Bacillus cereus NVH0597-99] gi|229089515|ref|ZP_04220784.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-42] gi|196029066|gb|EDX67671.1| proline--tRNA ligase [Bacillus cereus NVH0597-99] gi|228693822|gb|EEL47516.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-42] Length = 476 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|310818519|ref|YP_003950877.1| prolyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|309391591|gb|ADO69050.1| Prolyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 477 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 74/348 (21%), Positives = 140/348 (40%), Gaps = 75/348 (21%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ F I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 101 EEPLVIRPTSETIINRSFAKWIQSYRDLPLLINQWANVMRWEMRTRL-FLRTTEFLWQEG 159 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T ++ +M Y R F Sbjct: 160 HTCHETEADAEKETLQMLEVY-RTF----------------------------------- 183 Query: 221 VFCSKDFMDFPI----PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 ++D+M P+ SE F + SI +++ ++K+ Sbjct: 184 ---AEDYMAMPVLTGRKSETERFAGALRTYSI--------------------EAMMQDKK 220 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 ++ G G ++ F+G DGK H+V S+G+ + R++ +I + D Sbjct: 221 ----ALQAGTSHNLGQNFAKAFDTQFQGRDGKQHHVWQTSWGV-STRLIGGLIMTHSDDA 275 Query: 337 GIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYAR---LSKVGCDVFWDDMGEQI-GS 390 G++ P +AP + +I I KA D EK++A L + G +V DD + G Sbjct: 276 GLVVPPRLAPTHVVIIPILGKAADAEKTQVLEKVHAMAADLRRAGLNVLVDDDDTKSPGF 335 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 ++ +++G L+V +G K ++ + R +E + L + + A Sbjct: 336 KYNEHEVVGTCLRVELGPKDLAKDSCVMVRRDVRQKEFVPLAQAVEKA 383 >gi|262276749|ref|ZP_06054542.1| threonyl-tRNA synthetase [alpha proteobacterium HIMB114] gi|262223852|gb|EEY74311.1| threonyl-tRNA synthetase [alpha proteobacterium HIMB114] Length = 637 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 91/423 (21%), Positives = 161/423 (38%), Gaps = 48/423 (11%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S G W G ++ +R++Q G +E++ P + LW +SG ++ + +E Sbjct: 257 QEESPGAVFWHQKGWSLFQSLVKFMRDKQTDAGYLEVNTPEMLDKTLWEKSGHWEKF-QE 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + D ++K P + +F +KSY++LP + R E G+MR Sbjct: 316 HMYTTDADEKTFAIKPMNCPGHIQVFNQGLKSYKDLPLKISEFGKVHRYEPSGALHGLMR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F T E K+ L I+ G K++ ++ Sbjct: 376 VRAFTQDDAHIF-CTEEQITEESLKVTNLILDIYKSFGFKNVKLK--------------- 419 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +D E +V K + SE D I + E A L D++ Sbjct: 420 -FSDRPEKRVGDDKIWN----KSEKALLDAIKTSGLKYEINKGEGAFYGPKIEFVLIDAI 474 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAV 328 + + ++ ++LP + A++ DG K V + G++ + Sbjct: 475 GRDWQCGTLQVD----------FNLPGRLGASYVANDGSKKIPVMLHRAMFGSLERFIGI 524 Query: 329 IESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + H GK W P+ VA IS D K+ L K G DD E Sbjct: 525 LIEHHTGKFPFWLSPEQVAVLPIS--------NKQNDYASKVKLLLEKKGLRSIIDDRNE 576 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +I + + P+ +I G+K V ++ + I+ ++ +SLEE + S +N Sbjct: 577 KINYKIREHSVSKIPVLMICGAKEVQNNTITIRRLGQTNQQTVSLEEAVTNLS--LESNT 634 Query: 447 PVL 449 P + Sbjct: 635 PSI 637 >gi|229108063|ref|ZP_04237688.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock1-15] gi|229143182|ref|ZP_04271614.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24] gi|296501219|ref|YP_003662919.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|228640263|gb|EEK96661.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24] gi|228675338|gb|EEL30557.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock1-15] gi|296322271|gb|ADH05199.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 476 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ A + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQAHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E + ++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQL 376 >gi|30260563|ref|NP_842940.1| prolyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47525667|ref|YP_017016.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49183410|ref|YP_026662.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|227813066|ref|YP_002813075.1| prolyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|254686784|ref|ZP_05150642.1| prolyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254738991|ref|ZP_05196693.1| prolyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254744578|ref|ZP_05202257.1| prolyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254756164|ref|ZP_05208193.1| prolyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254761982|ref|ZP_05213831.1| prolyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|81584321|sp|Q81Z76|SYP2_BACAN RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA ligase 2; Short=ProRS 2 gi|30253931|gb|AAP24426.1| proline--tRNA ligase [Bacillus anthracis str. Ames] gi|47500815|gb|AAT29491.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49177337|gb|AAT52713.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|227002361|gb|ACP12104.1| proline--tRNA ligase [Bacillus anthracis str. CDC 684] Length = 508 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|300119016|ref|ZP_07056727.1| prolyl-tRNA synthetase [Bacillus cereus SJ1] gi|298723632|gb|EFI64363.1| prolyl-tRNA synthetase [Bacillus cereus SJ1] Length = 476 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|229051703|ref|ZP_04195164.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH676] gi|228721660|gb|EEL73143.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH676] Length = 476 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ A + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQAHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E + ++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQL 376 >gi|311069390|ref|YP_003974313.1| threonyl-tRNA synthetase [Bacillus atrophaeus 1942] gi|310869907|gb|ADP33382.1| threonyl-tRNA synthetase [Bacillus atrophaeus 1942] Length = 643 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 93/406 (22%), Positives = 166/406 (40%), Gaps = 36/406 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P L S +L+ SG ++ Y M Sbjct: 264 QGLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTPVLGSKELYETSGHWNHYQDGMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ + P + I+++ I SYR LP ++ R E+ G+ R R Sbjct: 324 IELDNETLALRPMNCPHHMMIYKNDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + + ++ GL R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKDEFIRTVRLIQDVYEDFGLNDYTFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTD-FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 +T+ + D M S D D+I S E A Y DV ++ ++ + Sbjct: 429 PEDTEKYFDDDEMWNKAQSMLKDAMDEIGSDYYEAEGEAAFYGPKLDV---QVKTAIGKE 485 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G DGK H + G+ + R VA +IE Sbjct: 486 ETLSTVQLD----FLLPERFDL----TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIE-E 536 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 H G W +AP + +I + V D +K+ RL + G V D E+IG + Sbjct: 537 HKGALPTW---LAPVQFQVIPVSP--SVHLDYAKKVQERLQREGLRVEVDIRDEKIGYKI 591 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A + P ++VG + + V ++ E +SL++ + A Sbjct: 592 REAQMQKIPYMLVVGDQEAENGAVNVRKYGEQKSETISLDDFVKKA 637 >gi|154174749|ref|YP_001407384.1| threonyl-tRNA synthetase [Campylobacter curvus 525.92] gi|171769252|sp|A7GVZ2|SYT_CAMC5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|112802358|gb|EAT99702.1| threonyl-tRNA synthetase [Campylobacter curvus 525.92] Length = 606 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 90/416 (21%), Positives = 159/416 (38%), Gaps = 55/416 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + I+ + G + P L AD+W SG Y +Y KE + Sbjct: 232 GLPIWLPNGGRLRSKLEQILYKAHRDRGYEPVRGPELLKADVWKRSGHYANY-KENMYFT 290 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +D P + ++++ I+SYR+LP F++ + R E G+ R REF Sbjct: 291 TIDDAEYGIKPMNCVGHIKVYQTEIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFA 350 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 D++ F + P K + + + + +G I + E+ + T Sbjct: 351 QDDSHIFCM-PSQIKQNI------------------LEILSFAGKIMQNFGFEYEMEIST 391 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + S + D + D+ I E A Y D+ K+ D+L Sbjct: 392 KPAKAIGSDEIWDIATNALKEALDENGFKYGIDEGGGAFYGPKIDI---KITDAL----- 443 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKD--------HYVQMGSYGIGAMRVVAAV 328 R + G I ++LP D + H +GS+ R + + Sbjct: 444 --KRKWQCGTI---QVDFNLPERFDLGYIDANNERQRPVMLHRALLGSF----ERFIGIL 494 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 IE + P +AP ++ ++ I AH D ++I L K D E Sbjct: 495 IEHTAGE----LPFFIAPTQVVIVPISDAH----LDYAKEIARELRKFNIDSEVASKNES 546 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 + + A+ P+ +++G V++ V ++ R + DMSL E +N + S Sbjct: 547 LNKRIRTAEKQRVPMIIVLGDNEVANRSVALRDRQARTQSDMSLAEFLNLTKEKLS 602 >gi|83283367|gb|ABC01299.1| prolyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 437 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 77/385 (20%), Positives = 155/385 (40%), Gaps = 73/385 (18%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEM---LRLADR 99 P G + + + + EE + + P L L+ E D + E+ R+ + Sbjct: 5 PYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIDGFSPEIATVTRVGQK 64 Query: 100 N-DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFL 156 ++ + PT E +M D F + I SYR+LP + Q +++ RP +R+ EFL Sbjct: 65 QLEENLFIRPTSEVLMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTTRP---FLRTSEFL 121 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 ++ ++ SYN+ L+I + I + E ++L Sbjct: 122 WQEGHTV-------HSSYNEAENFCLKILN---------------IYEKFAKEILLLP-- 157 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 V C K +E F A D + E+ Sbjct: 158 ----VICGK-------KTEKEKF-----------------AGAKDTYT-------IESLM 182 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + ++ G +F ++ F+ + K + S+G+ + R++ A+I + D Sbjct: 183 FDGQALQCGTSHFFADNFTKVYDIKFQNKENKLEHAYSTSWGV-STRLIGALIMTHSDDN 241 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 G++ P ++P ++ +I IK +Q+ E I +LS DV D+ + G + + A+ Sbjct: 242 GLVLPSKISPIQVQIIQIKNTEQI-DQVVEIIKDKLSDYRIDV--DNSDKSFGFKISEAE 298 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 + G P+++ +G + + ++++ I R Sbjct: 299 IKGIPIRIEIGPRDLENNQITISRR 323 >gi|299771535|ref|YP_003733561.1| threonyl-tRNA synthetase [Acinetobacter sp. DR1] gi|298701623|gb|ADI92188.1| threonyl-tRNA synthetase [Acinetobacter sp. DR1] Length = 640 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 86/415 (20%), Positives = 158/415 (38%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +Y Sbjct: 255 MQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTLWEKSGHAANYAD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSESRNYAV-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGQEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L++ +W + K+ Sbjct: 431 ----ALWDMAE------KSLAD--------------ALDAAGLEWEL-QPGEGAFYGPKI 465 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP + A++ D +D V + +G+ Sbjct: 466 EFSLKDC---------LGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P ++P + ++NI +ACEK+ A+L + G Sbjct: 517 FERFIGILIEHYAG---FMPPWLSPLQACVMNITDSQA---EACEKVVAKLKENGLRAIS 570 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P +++G + V + V ++ R MS++ I+ Sbjct: 571 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFID 625 >gi|290989139|ref|XP_002677200.1| threonyl-tRNA synthetase [Naegleria gruberi] gi|284090806|gb|EFC44456.1| threonyl-tRNA synthetase [Naegleria gruberi] Length = 672 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 8/137 (5%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H ++ G+ +LP GQ+ +++ +++R E G E+ P + +DLW SG +D Y Sbjct: 291 FFHPYAPGMVFFLPHGQRLFNSIQSLMRNEYWHRGYSEVQTPNVFHSDLWKTSGHWDKYA 350 Query: 91 KEMLRLA-DRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 + M L D+ ++ + P+H +F+ +SYR LP F + R+EL+ Sbjct: 351 ENMFVLEIDKAQHSLKPMNCPSH----CLMFKHRTRSYRELPIRFADFGVLHRNELKGAL 406 Query: 148 -GVMRSREFLMKDAYSF 163 G+ R R+F DA+ F Sbjct: 407 TGMTRLRKFQQDDAHIF 423 >gi|332664741|ref|YP_004447529.1| Prolyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100] gi|332333555|gb|AEE50656.1| Prolyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100] Length = 489 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 2/160 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + + YV S+G+ + R++ +I + D G+ Sbjct: 233 GKALQAGTSHFLGQNFAKAFDVKFLNENNQQEYVWATSWGV-STRLMGGLIMTHSDDDGL 291 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADL 397 + P +AP ++ ++ I V + KI A L G V +D DM + G +FA ++ Sbjct: 292 VVPPKLAPTQVVIVPIPKPSPVIDEVVHKIMAALKAKGIRVKYDMDMKNRPGFKFAEHEM 351 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 G P+++ +G + +++ +VE+ R T + LE + Y Sbjct: 352 HGIPVRLAIGERDLANGQVEVARRDTKEKTQQPLEGIEQY 391 Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ D +R+ I SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 115 EEELIVRPTSETIIWDTYRTWINSYRDLPLLINQWANVVRWEMRTRL-FLRTTEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T E + K+ Y Sbjct: 174 HTAHATKEEAVEETLKILDIY 194 >gi|212704422|ref|ZP_03312550.1| hypothetical protein DESPIG_02477 [Desulfovibrio piger ATCC 29098] gi|212672143|gb|EEB32626.1| hypothetical protein DESPIG_02477 [Desulfovibrio piger ATCC 29098] Length = 648 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 92/395 (23%), Positives = 159/395 (40%), Gaps = 53/395 (13%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ WLP G + R E + + P L + W SG YD Y + M Sbjct: 263 APGMVFWLPKGMMMRTILEDFWRREHIKRNYDLVQGPQLLRVETWQRSGHYDHYRQNMYF 322 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +D+ I P + I+R+ ++SYR+LP ++++ + R E G++R R+ Sbjct: 323 TQIEDDQYGI-KPMNCISHMLIYRNDLRSYRDLPQRYFELGVVHRHEKSGTLHGLLRVRQ 381 Query: 155 FLMKDAYSFDLTP---EGSKHSYNKMFVSYLRIF---HRLGLKSIPMRAESGPIGGDLSH 208 F DA+ TP EG + + +F +++G+ + P + IG D + Sbjct: 382 FTQDDAHIL-CTPEQLEGEILGVIHLIRDLMHLFGFDYKVGISTRPKDS----IGTDEAW 436 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 E LA + D +P E + D A Y DV +L Sbjct: 437 E---LATNALIEAVKKAD-----MPYEINEGDG------------AFYGPKIDV---RLL 473 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 D + + S ++ F ++ L T+ G DG+ H M I G++ Sbjct: 474 DCIGREWQCSTIQVD----FTLPERFDL----TYVGQDGERHRPVMVHRAIMGSLERFIG 525 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 V+ + G W +AP + ++ + AH++ ACE++ A +G V D E Sbjct: 526 VLIEQYAGAMPTW---LAPEQARILTVTDAHNEAALKACEELKA----LGIRVTADTRNE 578 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++G + A L P ++VG K V ++ R Sbjct: 579 KLGFKVREAQLAKVPYILVVGEKEAQAGGVNVRLR 613 >gi|255531804|ref|YP_003092176.1| threonyl-tRNA synthetase [Pedobacter heparinus DSM 2366] gi|255344788|gb|ACU04114.1| threonyl-tRNA synthetase [Pedobacter heparinus DSM 2366] Length = 641 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 82/413 (19%), Positives = 157/413 (38%), Gaps = 61/413 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-- 95 G+ WLP G + + + Q + G ++ P + +L++ SG Y+ YGK+ + Sbjct: 262 GLPLWLPKGAALRERLVQFLTRAQAKAGYEQVVTPHIGHKNLYITSGHYEKYGKDAFQPI 321 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + P + +I+++ +SY++LP F + +R E G+ R R Sbjct: 322 KTPQEGEEFFLKPMNCPHHCEIYKTKPRSYKDLPLRFAEFGTVYRYEQSGELHGLTRVRG 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F P+ K + K+ L +F LG + + L Sbjct: 382 FTQDDAHLF-CRPDQVKEEFKKVIDLVLYVFKSLGFDDYTAQ--------------VSLR 426 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D + D E W A + +EK ++ E Sbjct: 427 DPENKAKYIGSD-----------------------ENWRLAETAIIEAADEKGLPTVVEY 463 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 + G + +G + GT Y+LP + G+D + H V + G Sbjct: 464 GEAAFYGPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNQKHRPVMIHRAPFG 523 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ AV+ G +W ++P + ++ I + D +K+ L+ Sbjct: 524 SLERFIAVLIEHCAGNFPLW---LSPEQFIILPI---SEKYEDYAKKVSDELNNSDIRGL 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 D E+IG + A++ P +I+G K +++ K ++ G +M+L+E Sbjct: 578 IDFRDEKIGRKIRDAEVKKIPYMLIIGEKEMAEGKASVRKHGEGDLGEMTLQE 630 >gi|157826951|ref|YP_001496015.1| threonyl-tRNA synthetase [Rickettsia bellii OSU 85-389] gi|166225492|sp|A8GVV1|SYT_RICB8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157802255|gb|ABV78978.1| threonyl-tRNA synthetase [Rickettsia bellii OSU 85-389] Length = 633 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + ++G+ W G + + IR + + G IE+ P L LW SG ++ + + Sbjct: 256 QEEAQGMVFWHDKGWSVYNTIEQYIRRKIRKNGYIEVKTPVLVDKSLWELSGHWEKFRDD 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M L + +DK + P + IF+ IKSYR+LP + L R+E G+MR Sbjct: 316 MFAL-ETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGLMR 374 Query: 152 SREFLMKDAYSF 163 R + DA+ F Sbjct: 375 VRSLVQDDAHIF 386 >gi|91205350|ref|YP_537705.1| threonyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|122990926|sp|Q1RJ48|SYT_RICBR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91068894|gb|ABE04616.1| Threonyl-tRNA synthetase [Rickettsia bellii RML369-C] Length = 635 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + ++G+ W G + + IR + + G IE+ P L LW SG ++ + + Sbjct: 256 QEEAQGMVFWHDKGWSVYNTIEQYIRRKIRKNGYIEVKTPVLVDKSLWELSGHWEKFRDD 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M L + +DK + P + IF+ IKSYR+LP + L R+E G+MR Sbjct: 316 MFAL-ETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGLMR 374 Query: 152 SREFLMKDAYSF 163 R + DA+ F Sbjct: 375 VRSLVQDDAHIF 386 >gi|51473419|ref|YP_067176.1| threonyl-tRNA synthetase [Rickettsia typhi str. Wilmington] gi|73919822|sp|Q68XE8|SYT_RICTY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|51459731|gb|AAU03694.1| Threonine translase [Rickettsia typhi str. Wilmington] Length = 635 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + ++G+ W G + + IR++ + G IE+ P L LW SG + + + Sbjct: 256 QEEAQGMVFWHDKGWSIYNTIEQYIRKKNRKNGYIEVKTPVLVDKSLWEASGHWAKFRCD 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M L + +DK + P + IF+ IKSYR+LP + L R+E G+MR Sbjct: 316 MFTL-ETDDKILALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGLMR 374 Query: 152 SREFLMKDAYSF 163 R + DA+ F Sbjct: 375 VRSLVQDDAHIF 386 >gi|226320972|ref|ZP_03796518.1| prolyl-tRNA synthetase [Borrelia burgdorferi 29805] gi|226233623|gb|EEH32358.1| prolyl-tRNA synthetase [Borrelia burgdorferi 29805] Length = 488 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 96/428 (22%), Positives = 171/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L + L E D + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDVYKRF------------------------IEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG++ P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKG 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVDTLKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTISRR 365 >gi|257486172|ref|ZP_05640213.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331010502|gb|EGH90558.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 640 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 92/422 (21%), Positives = 159/422 (37%), Gaps = 65/422 (15%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY-LRIFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ L ++ G K Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIKLTLDVYADFGFK 413 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISL 245 I ++ + P +G D L D ET + + D P P E + I Sbjct: 414 DIELKLSTRPEKRVGSD------ELWDRAETALASALDSAGLPYDLQPGEGAFYGPKIEF 467 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSA 300 + L D L G ++ GT ++LP +SA Sbjct: 468 S--------------------LKDCL-------------GRVWQCGTLQLDFNLPIRLSA 494 Query: 301 TFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + + V + +G+ ++ ++G W +AP + ++NI Sbjct: 495 EYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPTQAVIMNITDKQA 551 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L++ G D E+IG + LL P +++G + V V ++ Sbjct: 552 ---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608 Query: 420 HR 421 R Sbjct: 609 TR 610 >gi|332529095|ref|ZP_08405059.1| threonyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] gi|332041318|gb|EGI77680.1| threonyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] Length = 644 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 88/391 (22%), Positives = 149/391 (38%), Gaps = 56/391 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + +HS G W P G V +R G E+ P + LW ++G +D Y + Sbjct: 255 LDEHSPGTVFWHPKGWTVWQEVEQYMRRVYRENGYREVKGPQILDKSLWEKTGHWDKYRE 314 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M +++ D A+ P + I++ +KSYR+LP + + R+E G+ Sbjct: 315 NMFTTESEKRDYAL--KPMNCPGHILIYKQGVKSYRDLPLRYGEFGACHRNEPTGGLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGD 205 MR R F D + F E + K F S L +++ G I + + P IG + Sbjct: 373 MRVRAFTQDDGHIF--CTEDQIQAEVKAFTSLLQKVYKDFGFTEIIYKLSTRPEKRIGSE 430 Query: 206 LSHEFI--VLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATS 260 S + LA+ G C D++ P E + I +++ QW T Sbjct: 431 ESWDRAENALAE-GLRASGCEFDYL----PGEGAFYGPKIEYTLKDALGRQWQ---CGTI 482 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGI 319 V +LPE + A F G DG H V + + Sbjct: 483 QVDP-----NLPER-----------------------LDAEFVGEDGGRHRPVMLHRAIV 514 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCD 378 G++ ++ H G W +AP +++++NI A C++ +K+ L Sbjct: 515 GSLERFIGILIEQHGGALPAW---LAPTQVAVLNITDAQADYCQEIAQKLRKALPNQELR 571 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 V D E+I + + P ++ G K Sbjct: 572 VETDLRNEKITYKIREHSMQKLPFILVAGDK 602 >gi|225552331|ref|ZP_03773271.1| prolyl-tRNA synthetase [Borrelia sp. SV1] gi|225371329|gb|EEH00759.1| prolyl-tRNA synthetase [Borrelia sp. SV1] Length = 488 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 97/428 (22%), Positives = 171/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L + L E D + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYSFLEREKDHVDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ ++ T E + + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGHTAHATEEEALEETLLIL 177 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 Y R E++ + VFC K SE Sbjct: 178 DVYKRFIE----------------------EYLAIP------VFCGKK-------SEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG++ P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVDTLKKAEFRVEIDKDIRNSPGFRFSSAEFKGIPIRLEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTISRR 365 >gi|110668486|ref|YP_658297.1| threonyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790] gi|121687233|sp|Q18H54|SYT_HALWD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|109626233|emb|CAJ52691.1| threonine--tRNA ligase [Haloquadratum walsbyi DSM 16790] Length = 642 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 162/427 (37%), Gaps = 73/427 (17%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G+K L+ +++ R G + P L +LW +SG Y++Y +M L Sbjct: 262 GLPLYHPDGKKILNELSSFARSLNLEAGYEPVETPHLFRTELWKQSGHYENYVDDMF-LL 320 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D +D+ P + IF H SYR+LP +++ +R E R G+ R F Sbjct: 321 DVSDEEYGLKPMNCPGHATIFDQHSWSYRDLPVRYFEDGKVYRKEQRGELSGLSRVWSFT 380 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFIVL 213 + D + F PE + + + + GL+ ++ R E +GGD + Sbjct: 381 IDDGHLF-CQPEQIEQEVTHVMDAIYSVLDTFGLEAHVALATRPEKS-VGGD------EI 432 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFD-------------DIISLNSIVEQWTAPYAATS 260 + ETQ+ + S+N D+D D +++ QW P Sbjct: 433 WENAETQLRSV-------LESQNIDYDLEPGDGAFYGPKIDFAFEDALGRQWDGPTVQLD 485 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI- 319 F ++ L T+ G D DH M + Sbjct: 486 ---------------------------FNMPDRFEL----TYTGEDNTDHQPVMIHRALY 514 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G+ V+ +GK +W +AP ++ ++ I + DQ+ +I LS + Sbjct: 515 GSYERFFMVLIEHFNGKFPLW---LAPDQVRILPI-SDDQLG--YAHRIKNELSDFRVSI 568 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 +D +G + A P +I+G VS + ++ R ++D+ L ++ Sbjct: 569 --EDRAWTLGRKIRAAQEERVPYMIIIGDDEVSTETISVRDRKEREKQDVDLSTFHSHLK 626 Query: 440 HRFSNNR 446 + N R Sbjct: 627 SEYENKR 633 >gi|312149307|gb|ADQ29378.1| prolyl-tRNA synthetase [Borrelia burgdorferi N40] Length = 488 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 96/428 (22%), Positives = 171/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L + L E D + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDVYKRF------------------------IEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG++ P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKG 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVDTLKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTISRR 365 >gi|289623636|ref|ZP_06456590.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647146|ref|ZP_06478489.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250] gi|298486701|ref|ZP_07004758.1| Threonyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158784|gb|EFH99847.1| Threonyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330867695|gb|EGH02404.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 640 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 92/422 (21%), Positives = 159/422 (37%), Gaps = 65/422 (15%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY-LRIFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ L ++ G K Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIKLTLDVYADFGFK 413 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISL 245 I ++ + P +G D L D ET + + D P P E + I Sbjct: 414 DIELKLSTRPEKRVGSD------ELWDRAETALASALDSAGLPYDLQPGEGAFYGPKIEF 467 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSA 300 + L D L G ++ GT ++LP +SA Sbjct: 468 S--------------------LKDCL-------------GRVWQCGTLQLDFNLPIRLSA 494 Query: 301 TFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + + V + +G+ ++ ++G W +AP + ++NI Sbjct: 495 EYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPTQAVIMNITDKQA 551 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L++ G D E+IG + LL P +++G + V V ++ Sbjct: 552 ---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608 Query: 420 HR 421 R Sbjct: 609 TR 610 >gi|281420278|ref|ZP_06251277.1| threonine--tRNA ligase [Prevotella copri DSM 18205] gi|281405773|gb|EFB36453.1| threonine--tRNA ligase [Prevotella copri DSM 18205] Length = 650 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 92/416 (22%), Positives = 153/416 (36%), Gaps = 65/416 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 KG+ WLP G + + ++R E+ P + L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTQLRLRLQELLRSLLKPYNYQEVICPGIGGKSLYVTSGHYAHYGKDAFQP 322 Query: 96 -LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + +++ +SY++LP + FR E G+ R R Sbjct: 323 IQTPEEDEEYMLKPMNCPHHCEVYARKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + + K + + L++F G ++ + I L Sbjct: 383 TFTQDDAHIF-VRSDQVKSEFENVIDVILKVFKIFGFENYEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D +T+ + D E W A + EK ++ E Sbjct: 428 HDPKDTEKYIGSD-----------------------EIWEESENAIREACKEKGLETREE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 VGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFKLEYTAEDNSKKTPVMIHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ AV+ G +W PD VA IS + D +K+ L K G Sbjct: 525 GSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKFNDYAQKVRQYLDKQGV 576 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 DD E+IG + +L P VIVG K ++ V ++ + G + MS+EE Sbjct: 577 RALVDDRNEKIGRKIRDNELKRVPYMVIVGEKESAEGLVSMRKQGGGEQATMSMEE 632 >gi|150007636|ref|YP_001302379.1| prolyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|262381848|ref|ZP_06074986.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_33B] gi|301310397|ref|ZP_07216336.1| proline--tRNA ligase [Bacteroides sp. 20_3] gi|166980137|sp|A6LAP3|SYP_PARD8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|149936060|gb|ABR42757.1| prolyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|262297025|gb|EEY84955.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_33B] gi|300831971|gb|EFK62602.1| proline--tRNA ligase [Bacteroides sp. 20_3] Length = 493 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 83/166 (50%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G + TF +GK Y S+G+ + R++ A+I S D G+ Sbjct: 236 GKALQAGTSHFLGQNFGKAFDVTFIDKNGKSDYAWATSWGV-STRLIGALIMSHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I + EK I A+L +G V +DD ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYRSAEQLTQISEKVAGIVAKLKALGISVKYDDADNKKPGWKFAE 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++ +G + + ++ +E+ R T +E ++ + + Y + Sbjct: 355 YELKGVPVRLAMGGRDLENNTIEVMRRDTLEKETITCDGIEEYVKN 400 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +R+ I+SYR+LP Q R E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYRNWIQSYRDLPILCNQWANVMRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKM 177 ++ ++ T E ++ KM Sbjct: 173 WQEGHTAHATREEAEIEAKKM 193 >gi|284045075|ref|YP_003395415.1| threonyl-tRNA synthetase [Conexibacter woesei DSM 14684] gi|283949296|gb|ADB52040.1| threonyl-tRNA synthetase [Conexibacter woesei DSM 14684] Length = 643 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 99/420 (23%), Positives = 164/420 (39%), Gaps = 75/420 (17%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G +++ A RE G E+ P + ++LW SG +D Y + M Sbjct: 267 SPGSAFWLPRGTSLWNSLVAFTREMNEPRGYQEVKTPLIFDSELWRTSGHWDKYRENMF- 325 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + D+ + P + +FRS SYR LP + + L R+E G+MR R Sbjct: 326 VTHAEDRDLAVKPMNCPGHAHLFRSQRHSYRELPVRYSEPGLLHRNEPSGTLHGLMRVRH 385 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG---------LKSIPMRAESGPIGGD 205 F DA+ F T E + ++ IF LG L + P R IG D Sbjct: 386 FAQDDAHIF-CTEE---QVHGEVVACLDLIFDTLGRFGFEIDVELSTRPERR----IGTD 437 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 E A+ G+ + + + + + + F Y D H Sbjct: 438 ---EMWDRAE-GKLRAALEQQGLRYRVNEGDGAF----------------YGPKIDFH-- 475 Query: 266 KLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKD------HYVQMGS 316 + DS+ R ++G + + F ++ L T+ GAD ++ H MGS Sbjct: 476 -VTDSI-------GRSWQLGTVQLDYSFPERFEL----TYVGADDREHRPVMIHRAAMGS 523 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 Y R + +IE G+ +W +AP + ++ I H RD + A+L Sbjct: 524 Y----ERFIGMLIEHWA-GEFPVW---LAPVQAIVLPIADRHADYARD----VVAQLRAA 571 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 V DD E +G + A+L P +++G + +V ++ G + + E + Sbjct: 572 RVRVELDDRTESVGRKIRDAELQKIPYMLVIGDREREAGEVALRRHREGDEGSLPVAEFV 631 >gi|312622904|ref|YP_004024517.1| threonyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312203371|gb|ADQ46698.1| threonyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 639 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 96/410 (23%), Positives = 159/410 (38%), Gaps = 45/410 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G +LP G + + REE + G E+ P + + DLWV+SG +D Y Sbjct: 258 IFEEGPGFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIMLTKDLWVQSGHWDHYKG 317 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M +D+ P + +++ SYR LP ++ L R EL G+M Sbjct: 318 NMY-FTKIDDQEFAIKPMNCPGSILVYKRKSHSYRELPERLCELGLVHRHELSGVLHGLM 376 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLS 207 R R F DA+ F + P K + + G K + R E+ +G D Sbjct: 377 RVRCFTQDDAHIF-MLPSQIKDEIKGVIDLIDYFYSVFGFKYHVELSTRPENS-MGTD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E +A+T + + +D+ I + F Y D H E Sbjct: 433 -EQWNMAETALKEAL-EEVGIDYKINEGDGAF----------------YGPKIDFHLE-- 472 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVA 326 DSL + + ++ F ++ L + G DG H V + G++ Sbjct: 473 -DSLKRTWQCATIQLD----FQMPERFDL----YYIGEDGAKHRPVMLHRVVFGSIERFI 523 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++ G +W +AP +I +I + + D KI L + G V D E Sbjct: 524 AILTEHFAGAFPVW---LAPTQIRIIPVSDN---FNDYAAKISQILKENGFRVEEDFRSE 577 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +G + A L P VIVG K D+ + ++ R G +++E ++ Sbjct: 578 TVGYKIRDAQLQKIPYMVIVGEKEQRDNTIAVRDRKKGDLGSFTIDEFVS 627 >gi|29345832|ref|NP_809335.1| threonyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|73919769|sp|Q8AAP2|SYT_BACTN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|29337725|gb|AAO75529.1| threonyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] Length = 646 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 98/432 (22%), Positives = 165/432 (38%), Gaps = 73/432 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + +I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K +LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPDQVKD-------EFLRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S +F +F D ++ + + W A + EK Sbjct: 410 --------VFRSMNFQNF---EAQISLRDKVNREKYIGSDDNWEKAEQAIIEACEEKGLP 458 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + G+D + H V + Sbjct: 459 AKIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIH 518 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W PD VA IS + +QV K+Y ++ Sbjct: 519 RAPFGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPISEKFNEYAEQV------KMYLKM 571 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 ++ V DD E+IG + ++ P +IVG K + +V ++ + G + M E Sbjct: 572 HEIRAIV--DDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKYE 629 Query: 433 EVINYASHRFSN 444 E + N Sbjct: 630 EFAKILNEEVQN 641 >gi|67459371|ref|YP_246995.1| threonyl-tRNA synthetase [Rickettsia felis URRWXCal2] gi|73919821|sp|Q4UKU3|SYT_RICFE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|67004904|gb|AAY61830.1| Threonyl-tRNA synthetase [Rickettsia felis URRWXCal2] Length = 635 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + ++G+ W G + + IR++ + G E+ P L LW SG ++ + ++ Sbjct: 256 QEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASGHWEKFRED 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M L + +DK + P + IF+ IKSYR+LP + L R+E G+MR Sbjct: 316 MFAL-ETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGLMR 374 Query: 152 SREFLMKDAYSF 163 R + DA+ F Sbjct: 375 VRSLVQDDAHIF 386 >gi|315608143|ref|ZP_07883135.1| proline--tRNA ligase [Prevotella buccae ATCC 33574] gi|315250112|gb|EFU30109.1| proline--tRNA ligase [Prevotella buccae ATCC 33574] Length = 493 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ T+ D K YV S+G+ + R++ A+I D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTYLNKDNKPEYVWATSWGV-STRLMGALIMVHSDDNGL 294 Query: 339 IWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ +I I K DQ+ + + RL +G V +DD ++ G +FA Sbjct: 295 VLPPKLAPIQVVIIPITKGADQLQAINAKLQPVIDRLRDMGISVKYDDADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +L G P+++++G + + D+ +EI R T +E +S + + Sbjct: 355 YELKGVPVRLVMGGRDLEDNTIEIMRRDTLEKESVSFDGI 394 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A R D+ ++ PT E ++ + +++ I S+R+LP Q R E+R R +R+ EFL Sbjct: 114 AARLDEELVIRPTSETIIWNTYKNWIHSWRDLPIMCNQWCNVMRWEMRTR-PFLRTSEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|257867921|ref|ZP_05647574.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257874250|ref|ZP_05653903.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257802004|gb|EEV30907.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257808414|gb|EEV37236.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10] Length = 477 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 3/173 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GTK++ T+ + K Y S+G+ + R++ A+I + D G+ Sbjct: 214 GKAVQAGTSHYMGTKFAEAFDITYLTKENKHTYAHTTSWGV-STRLLGALIMTHGDENGL 272 Query: 339 IWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 ++P ++AP ++ L+ + + + E++YA G V DD G +F + Sbjct: 273 VFPPTIAPTQVVLLPVGPWKKNPAILEKLEELYANFKAKGIRVRLDDSDNSPGYKFNEWE 332 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L G L++ G + + KV +K R ++ ++LEE+ + P L Sbjct: 333 LKGACLRIECGPRDLEAGKVMVKVRDLPDKQTVALEELEAFVDQELQAMTPRL 385 >gi|254515029|ref|ZP_05127090.1| threonyl-tRNA synthetase [gamma proteobacterium NOR5-3] gi|219677272|gb|EED33637.1| threonyl-tRNA synthetase [gamma proteobacterium NOR5-3] Length = 645 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 103/457 (22%), Positives = 164/457 (35%), Gaps = 94/457 (20%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD KL L + + G+ W P G + +RE+Q Sbjct: 230 QYLRRIEEAEKRDHRKIGKKLDLF--HTQEEAPGMVFWHPQGWTIYQVIEQYMREQQRAQ 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P L LW +SG D +G +M L +++ P + +F ++S Sbjct: 288 DYQEIKTPQLVDMSLWEKSGHADKFGDDMFMLT-ADEREFAVKPMNCPCHVQVFNQGLRS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF----DLTPEGSKHSYNKMFV 179 YR+LP + R+E G+MR R F D + F + PE S F+ Sbjct: 347 YRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTEEQIQPEVS------TFI 400 Query: 180 SYLR-IFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 +L ++ G + R + P +G D Sbjct: 401 DFLHAVYADFGFDEVIYRLSTRPAQRVGTD------------------------------ 430 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD--SLPENKRVSARGIE------VGHI 287 E W A +D + + D LP IE +G + Sbjct: 431 --------------EDWDRAEKALADALDAQGLDWQELPGEGAFYGPKIEFSLKDCIGRV 476 Query: 288 FYFGT---KYSLP--MSATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGK 336 + GT +S+P + A + DG H +GS+ R + +IE + +G Sbjct: 477 WQMGTIQVDFSMPGRLDAQYVAEDGSRKTPVMLHRAILGSF----ERFIGILIE-NFEGS 531 Query: 337 GIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 +W +AP + +INI + D+ R + L G VF D E+IG + Sbjct: 532 FPVW---LAPKQAVVINITEKQDEYVR----FVEDSLKNKGFRVFSDLRNEKIGFKIREH 584 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + P V+VG K V V ++ R MSLE Sbjct: 585 TIQRVPYLVVVGEKEVEAKTVAVRSRNGEDLGTMSLE 621 >gi|330989241|gb|EGH87344.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 640 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 92/422 (21%), Positives = 159/422 (37%), Gaps = 65/422 (15%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY-LRIFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ L ++ G K Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIKLTLDVYADFGFK 413 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISL 245 I ++ + P +G D L D ET + + D P P E + I Sbjct: 414 DIELKLSTRPEKRVGSD------ELWDRAETALASALDSAGLPYDLQPGEGAFYGPKIEF 467 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSA 300 + L D L G ++ GT ++LP +SA Sbjct: 468 S--------------------LKDCL-------------GRVWQCGTLQLDFNLPIRLSA 494 Query: 301 TFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + + V + +G+ ++ ++G W +AP + ++NI Sbjct: 495 EYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPTQAVIMNITDKQA 551 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L++ G D E+IG + LL P +++G + V V ++ Sbjct: 552 ---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608 Query: 420 HR 421 R Sbjct: 609 TR 610 >gi|320324302|gb|EFW80381.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076] gi|320328576|gb|EFW84578.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] gi|330885566|gb|EGH19715.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 640 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 92/422 (21%), Positives = 159/422 (37%), Gaps = 65/422 (15%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY-LRIFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ L ++ G K Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIKLTLDVYADFGFK 413 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISL 245 I ++ + P +G D L D ET + + D P P E + I Sbjct: 414 DIELKLSTRPEKRVGSD------ELWDRAETALASALDSAGLPYDLQPGEGAFYGPKIEF 467 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSA 300 + L D L G ++ GT ++LP +SA Sbjct: 468 S--------------------LKDCL-------------GRVWQCGTLQLDFNLPIRLSA 494 Query: 301 TFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + + V + +G+ ++ ++G W +AP + ++NI Sbjct: 495 EYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPTQAVIMNITDKQA 551 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L++ G D E+IG + LL P +++G + V V ++ Sbjct: 552 ---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608 Query: 420 HR 421 R Sbjct: 609 TR 610 >gi|126667900|ref|ZP_01738865.1| threonyl-tRNA synthetase [Marinobacter sp. ELB17] gi|126627560|gb|EAZ98192.1| threonyl-tRNA synthetase [Marinobacter sp. ELB17] Length = 641 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 103/452 (22%), Positives = 179/452 (39%), Gaps = 86/452 (19%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD KL L + + + G+ W P G + +R+ +R G Sbjct: 231 YVHRIEEAEKRDHRKVGKKLNL--FHMQEEAPGMVFWHPDGWTIYQKMEQYMRDILHRHG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + S LW +SG +D + + M ++++D A+ P + +F +KS Sbjct: 289 YQEIKTPQIVSRSLWEKSGHWDKFKEGMFTTESEKHDFAI--KPMNCPCHIQVFNQGLKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF----DLTPEGSKHSYNKMFV 179 Y++LP + R+E G+MR R F DA+ F D+ E SK F+ Sbjct: 347 YKDLPLRLAEFGSCHRNEASGALHGLMRVRGFTQDDAHIFCEESDIQNEVSK------FI 400 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 DL HE V D G T++ + P + Sbjct: 401 -------------------------DLLHE--VYKDFGFTEIL----YKLSTRPEKRVGS 429 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEK--LFDSLPENKRVSARGIE------VGHIFYFG 291 D++ W AA N + ++ LP IE +G ++ G Sbjct: 430 DEV---------WDKSEAALEQALNREGVKWELLPGEGAFYGPKIEFSLKDCIGRVWQCG 480 Query: 292 T---KYSLP--MSATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 T +S+P + A + + + H +GS+ R + +IE ++G + Sbjct: 481 TIQVDFSMPGRLGAQYVADNSERKTPVMLHRAVLGSF----ERFIGILIE-EYEGA---F 532 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P +AP +++++NI + R+ CE + + +G V D E+IG + + Sbjct: 533 PSWLAPTQVAILNITDNQ---REYCENLAKKWDSLGFRVNADLRNEKIGFKIREHTINKV 589 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 P V+VG K V ++ V ++ R +SLE Sbjct: 590 PFLVVVGDKEVENNTVAVRTRKGEDLGTLSLE 621 >gi|300914721|ref|ZP_07132037.1| Threonyl/alanyl tRNA synthetase SAD [Thermoanaerobacter sp. X561] gi|300889656|gb|EFK84802.1| Threonyl/alanyl tRNA synthetase SAD [Thermoanaerobacter sp. X561] Length = 634 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 95/413 (23%), Positives = 160/413 (38%), Gaps = 51/413 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH G + P G + + R+E + G E+ P + + +LW SG +D Y K Sbjct: 254 IHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEELWRRSGHWDHY-K 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + +++S + SYR+LP ++ L R EL G+M Sbjct: 313 ENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVHRHELSGVLHGLM 372 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKM--FVSYL-RIFHRLGLKSIPMRAESGPIGGDLS 207 R R F DA+ F +TPE + + V Y +IF + R E+ +G D Sbjct: 373 RVRSFTQDDAHLF-MTPEQVEDEILGVINLVDYFYKIFGFEYFVELSTRPENS-MGSDED 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A + + + ++ P D A Y D H L Sbjct: 431 WELATNA------LISALNRVNLPYKVNEGD--------------GAFYGPKIDFH---L 467 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMR 323 DS+ R + G I F ++ L + G DG+ H + + G++ Sbjct: 468 KDSI-------GRTWQCGTIQLDFQMPERFEL----EYIGPDGEKHRPIMLHRVIYGSIE 516 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +P +AP ++ ++ I + +Y RL + D+ Sbjct: 517 RFIGILTEHFAGA---FPTWLAPVQVRVLPISDKHYAY---AQNVYGRLLENDIRAELDE 570 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E++G + A L P +IVG K V V ++ R G +SL E I Sbjct: 571 RNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIE 623 >gi|298384716|ref|ZP_06994276.1| threonine--tRNA ligase [Bacteroides sp. 1_1_14] gi|298262995|gb|EFI05859.1| threonine--tRNA ligase [Bacteroides sp. 1_1_14] Length = 646 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 98/432 (22%), Positives = 165/432 (38%), Gaps = 73/432 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + +I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K +LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPDQVKD-------EFLRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S +F +F D ++ + + W A + EK Sbjct: 410 --------VFRSMNFQNF---EAQISLRDKVNREKYIGSDDNWEKAEQAIIEACEEKGLP 458 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + G+D + H V + Sbjct: 459 AKIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIH 518 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W PD VA IS + +QV K+Y ++ Sbjct: 519 RAPFGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPISEKFNEYAEQV------KMYLKM 571 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 ++ V DD E+IG + ++ P +IVG K + +V ++ + G + M E Sbjct: 572 HEIRAIV--DDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKYE 629 Query: 433 EVINYASHRFSN 444 E + N Sbjct: 630 EFAKILNEEVQN 641 >gi|90417311|ref|ZP_01225237.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] gi|90330896|gb|EAS46159.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] Length = 642 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 90/421 (21%), Positives = 156/421 (37%), Gaps = 70/421 (16%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q G E+ P + LW +SG D +G Sbjct: 255 MQEEAPGSIFWHPKGWSVYSAIEEYMRNKQREQGYQEIKTPQIVDMSLWEKSGHADKFGD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +M L +D+ P + +F +KSYR+LP + R+E G+M Sbjct: 315 DMFSL-QTDDRNYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSF----DLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGGD 205 R R F DA+ F + PE S+ F+ +L ++ G I R + P Sbjct: 374 RVRSFTQDDAHIFCTEEQIQPEVSQ------FIDFLHEVYADFGFDEIIYRLSTRPPERV 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 S E A+ Q +K +P E + I + Sbjct: 428 GSDEDWDRAEEALGQALDAKSLPWQELPGEGAFYGPKIEFS------------------- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKD------HYVQM 314 L D +G ++ GT +S+P + A + DG H + Sbjct: 469 -LKDC-------------IGRVWQLGTIQVDFSMPGRLDAQYVAEDGARKVPVMLHRAIL 514 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLS 373 GS+ R + +IE ++G W +AP + + NI A + ++ + + + Sbjct: 515 GSF----ERFIGILIE-QYEGAFPFW---LAPEQAVVANITDAQAEYAQEVAKSLQNKGF 566 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +V CD+ E+IG + + P ++VG V ++ R + LE+ Sbjct: 567 RVNCDL----RNEKIGFKIRGHSMQRVPFILVVGDNEKESRTVAVRTRDGKDLGSLPLEQ 622 Query: 434 V 434 V Sbjct: 623 V 623 >gi|193216459|ref|YP_001999701.1| prolyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] gi|193001782|gb|ACF06997.1| prolyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] Length = 476 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 96/444 (21%), Positives = 172/444 (38%), Gaps = 91/444 (20%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSY 89 M + SKG + PL DN+ I E+ + +P L L E + + Sbjct: 28 MAYGSSKGAIIFKPLSFGIWDNIRKIADEKFKEKDVANVYLPLLIPEGLLQKEKDHLEGF 87 Query: 90 GKEMLRLADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDEL 143 E+ + + K + PT E + D FR+ I+S+ +LP + Q L++ Sbjct: 88 NPELATVTEVGGKKLAEKFFIRPTSEVLFADFFRNEIESHNDLPLIYNQWVNVLRWEKTT 147 Query: 144 RPRFGVMRSREFLMKDAYSFDL-TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPI 202 P +R+REFL ++ ++ + E K +Y +M Y+ + +IP+ A Sbjct: 148 NP---FLRTREFLWQEGHTMHANSAEAIKLTY-EMLNVYIDLVQ--NYLAIPVIA----- 196 Query: 203 GGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDV 262 G HE F DF +++ ++++ Sbjct: 197 GNKTEHE-----------KFSGADFT--------------LTIEAMMK------------ 219 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM 322 + ++ G Y ++ FK + + + S+GI + Sbjct: 220 ---------------DGKALQSGTSHYLAQNFTKAFEIAFKNKNNEQEFAYGTSWGI-ST 263 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVGCDVFW 381 R++ A+I + D +GII P +AP +I +I I A D + +I +L+KV V Sbjct: 264 RLLGALIMTHGDDRGIIIPPKIAPVQIDIIEILAKKDPKVHEVALEITKKLNKVFA-VKL 322 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSK--------FVSDSKVE--------IKHRLTGI 425 DD + G + A +++ G PL++ VG FV K+E I+ R I Sbjct: 323 DDSDKSPGFKAANSEIHGTPLRIEVGPNDLINNQVTFVRRDKIEKISVPLDKIEARAKEI 382 Query: 426 REDMSLEEVINYASHRFSNNRPVL 449 + + + AS R NN ++ Sbjct: 383 LDSIQ-SNLFTMASQRIKNNLEIV 405 >gi|303242609|ref|ZP_07329085.1| threonyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] gi|302589866|gb|EFL59638.1| threonyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] Length = 635 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 98/415 (23%), Positives = 165/415 (39%), Gaps = 55/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I++ G ++P G + + REE G E+ P + + DLW SG +D Y + Sbjct: 255 IYEEGPGFPFFMPKGMMLRNLLENYWREEHKARGYQEIRTPIILNEDLWHRSGHWDHYKE 314 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + +++ + SYR+LP ++ L R EL G+ Sbjct: 315 NMYFTKIDEGDYAI--KPMNCPGGMLVYKRKLHSYRDLPQRMAELGLVHRHELSGALHGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 MR R F DA+ F +TPE K + ++ G K + R E +G D Sbjct: 373 MRVRCFTQDDAHIF-MTPEQIKDEVLGVINLIDDFYNVFGFKYHVELSTRPEDS-MGSD- 429 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + E +D +D + ++ + E A Y D H E Sbjct: 430 --------EQWEMATNALRDALD----ARKMNY-------KVNEGDGAFYGPKIDFHLE- 469 Query: 267 LFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM 322 DS+ R + G I F ++ L + GADG+ H V + G++ Sbjct: 470 --DSI-------GRTWQCGTIQLDFQMPQRFDL----NYVGADGEKHRPVMIHRVVFGSI 516 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLIN-IKAHDQVCRDACEKIYARLSKVGCDVFW 381 A++ G +P ++P ++ ++ I H Q + + A L G V Sbjct: 517 ERFIAILTEHFAG---AFPTWLSPVQVKILPLIDKHHQFAGE----VKAALEAKGVRVEV 569 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + A L P +++G K + + V ++ R G M+L + +N Sbjct: 570 DLRNEKIGYKIREAQLEKTPYMLVIGDKELENGAVAVRSRKDGDLGSMALNDFVN 624 >gi|56751513|ref|YP_172214.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 6301] gi|73919835|sp|Q5N1X6|SYT_SYNP6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56686472|dbj|BAD79694.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 6301] Length = 607 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 84/422 (19%), Positives = 163/422 (38%), Gaps = 44/422 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +++EQ + G + P L DL+ SG + +Y ++M + Sbjct: 220 GLPLWTPKGTILRSTLEDFLKQEQMKRGYQSVVTPHLARVDLFKVSGHWQNYREDMFPMM 279 Query: 98 DRNDKA------MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +D+A + P + I+++ ++SYR LP + +R E G+ Sbjct: 280 AEDDEARGLEQGFVLKPMNCPFHIQIYKNELRSYRELPIRLAEFGTVYRYEQSGELGGLT 339 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F + D++ F + P+ + + L +F L LK R S ++ Sbjct: 340 RVRGFTVDDSHLF-VRPDQLASEFLSVVDLILSVFKALNLKKFKARLS---FRDPESDKY 395 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 I D E K +E D I + A Y D + D Sbjct: 396 IGSDDVWE------KAESAIQAAAETLGMDYFIGVGE-----AAFYGPKLDFIFQDALD- 443 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 R ++G + Y+LP + DG + V + G++ + Sbjct: 444 ---------REWQLGTV---QVDYNLPERFDLEYVAEDGSRQRPVMIHRAPFGSLERLIG 491 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G +W +AP +I L+ + + D C+++ +L +G V D G++ Sbjct: 492 ILIEEYAGDFPLW---LAPEQIRLLPVT---ETVLDYCQQVADQLRAIGVRVQVDCSGDR 545 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 +G A+ P+ ++G++ + I+ R TG +++ ++ S + P Sbjct: 546 LGKLIRNAEKAKIPVMAVIGAQEAESETLSIRTRATGDLGSLTVADLTKRLSSAIAEKLP 605 Query: 448 VL 449 L Sbjct: 606 HL 607 >gi|330951866|gb|EGH52126.1| threonyl-tRNA synthetase [Pseudomonas syringae Cit 7] Length = 640 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 93/434 (21%), Positives = 162/434 (37%), Gaps = 68/434 (15%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + Y L I + RD K+ R G+ H + + G+ W P G + +R+ Q Sbjct: 229 AAYILRIEEAEKRD----HRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQ 284 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G +E+ P + LW +SG + +Y M + I P + +F Sbjct: 285 RENGYLEIKTPQVVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQG 343 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP + R+E G+MR R F DA+ F E + + F+ Sbjct: 344 LKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIK 401 Query: 181 Y-LRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---P 233 L ++ G K I ++ + P +G D L D E+ + + D P P Sbjct: 402 LTLDVYADFGFKDIELKLSTRPEKRVGSD------ELWDRAESALASALDSAGLPYDLQP 455 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT- 292 E + I + L D L G ++ GT Sbjct: 456 GEGAFYGPKIEFS--------------------LKDCL-------------GRVWQCGTL 482 Query: 293 --KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 ++LP +SA + D + + V + +G+ ++ ++G W +AP Sbjct: 483 QLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPT 539 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + ++NI D ++ L++ G D E+IG + LL P +++G Sbjct: 540 QAVIMNITDKQA---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIG 596 Query: 408 SKFVSDSKVEIKHR 421 + V V ++ R Sbjct: 597 DREVEMQTVAVRTR 610 >gi|255013835|ref|ZP_05285961.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_7] gi|256839822|ref|ZP_05545331.1| prolyl-tRNA synthetase [Parabacteroides sp. D13] gi|298375581|ref|ZP_06985538.1| proline--tRNA ligase [Bacteroides sp. 3_1_19] gi|256738752|gb|EEU52077.1| prolyl-tRNA synthetase [Parabacteroides sp. D13] gi|298268081|gb|EFI09737.1| proline--tRNA ligase [Bacteroides sp. 3_1_19] Length = 493 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 83/166 (50%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G + TF +GK Y S+G+ + R++ A+I S D G+ Sbjct: 236 GKALQAGTSHFLGQNFGKAFDVTFIDKNGKSDYAWATSWGV-STRLIGALIMSHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I + EK I A+L +G V +DD ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYRSAEQLAQISEKVAGIVAKLKALGISVKYDDADNKKPGWKFAE 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++ +G + + ++ +E+ R T +E ++ + + Y + Sbjct: 355 YELKGVPVRLAMGGRDLENNTIEVMRRDTLEKETITCDGIEEYVKN 400 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +R+ I+SYR+LP Q R E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYRNWIQSYRDLPILCNQWANVMRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKM 177 ++ ++ T E ++ KM Sbjct: 173 WQEGHTAHATREEAEIEAKKM 193 >gi|51598659|ref|YP_072847.1| prolyl-tRNA synthetase [Borrelia garinii PBi] gi|81825638|sp|Q661L6|SYP_BORGA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|51573230|gb|AAU07255.1| prolyl-tRNA synthetase [Borrelia garinii PBi] Length = 488 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 97/428 (22%), Positives = 170/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L L E + + E + D +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYGFLEKEKDHIEGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEAVEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDLYKRF------------------------MEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+GI + R++ A+I D KG+I P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGI-STRLIGALIMVHSDEKGLILPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVHALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRIEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTIMRR 365 >gi|289673298|ref|ZP_06494188.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5] gi|330898079|gb|EGH29498.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 640 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 93/434 (21%), Positives = 162/434 (37%), Gaps = 68/434 (15%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + Y L I + RD K+ R G+ H + + G+ W P G + +R+ Q Sbjct: 229 AAYILRIEEAEKRD----HRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQ 284 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G +E+ P + LW +SG + +Y M + I P + +F Sbjct: 285 RENGYLEIKTPQVVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQG 343 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP + R+E G+MR R F DA+ F E + + F+ Sbjct: 344 LKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIK 401 Query: 181 Y-LRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---P 233 L ++ G K I ++ + P +G D L D E+ + + D P P Sbjct: 402 LTLDVYADFGFKDIELKLSTRPEKRVGSD------ELWDRAESALASALDSAGLPYDLQP 455 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT- 292 E + I + L D L G ++ GT Sbjct: 456 GEGAFYGPKIEFS--------------------LKDCL-------------GRVWQCGTL 482 Query: 293 --KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 ++LP +SA + D + + V + +G+ ++ ++G W +AP Sbjct: 483 QLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPT 539 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + ++NI D ++ L++ G D E+IG + LL P +++G Sbjct: 540 QAVIMNITDKQA---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIG 596 Query: 408 SKFVSDSKVEIKHR 421 + V V ++ R Sbjct: 597 DREVEMQTVAVRTR 610 >gi|260170790|ref|ZP_05757202.1| threonyl-tRNA synthetase [Bacteroides sp. D2] gi|315919124|ref|ZP_07915364.1| threonyl-tRNA synthetase [Bacteroides sp. D2] gi|313692999|gb|EFS29834.1| threonyl-tRNA synthetase [Bacteroides sp. D2] Length = 646 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 98/432 (22%), Positives = 164/432 (37%), Gaps = 73/432 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + +I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F PE K +LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPEQVKD-------EFLRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S DF +F D ++ + + W A + EK Sbjct: 410 --------VFRSMDFQNF---EAQISLRDKVNREKYIGSDDNWEKAEQAIIEACAEKGLP 458 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + G+D + H V + Sbjct: 459 AKIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIH 518 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W P+ V IS + +QV K+Y ++ Sbjct: 519 RAPFGSMERFVAVLIEHTA-GKFPLWLTPEQVVILPISEKFNEYAEQV------KMYLKI 571 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 ++ V DD E+IG + ++ P +IVG K + +V ++ + G + M E Sbjct: 572 HEIRAIV--DDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFE 629 Query: 433 EVINYASHRFSN 444 E + N Sbjct: 630 EFAKILNEEVQN 641 >gi|119953193|ref|YP_945402.1| prolyl-tRNA synthetase [Borrelia turicatae 91E135] gi|119861964|gb|AAX17732.1| prolyl-tRNA synthetase [Borrelia turicatae 91E135] Length = 501 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 86/395 (21%), Positives = 156/395 (39%), Gaps = 71/395 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-LWVESGRYDSYGKEMLR 95 KG +P G + + +I+ + TG P L + L E + E+ Sbjct: 45 KGCMVIMPYGYAIWEQIKSILDNKFKETGHENAYFPLLIPYEFLEREKEHVKGFSPELAV 104 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + + + ++ PT E ++ +++ IKSYR+LP Q R E R R +R Sbjct: 105 ITTAGGEELAEPLVLRPTSETIIWNMYSKWIKSYRDLPVKINQWANIVRWEKRTR-PFLR 163 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 + EFL ++ ++ T + +F+ L ++ R Sbjct: 164 TTEFLWQEGHTAHET--AGEALEETLFI--LNLYKRF----------------------- 196 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + D VFC + +E F +S +I ++L Sbjct: 197 -IEDYLAIPVFCGQK-------TEREKFAGAVSTYTI--------------------EAL 228 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 ++K+ ++ G Y G ++ F+ G+ YV S+G+ + R++ A+I Sbjct: 229 MQDKK----ALQAGTSHYLGLNFAKAFDVKFQNKKGEMDYVFATSWGV-STRLIGALIMV 283 Query: 332 SHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACE---KIYARLSKVGCDVFWD-DMGE 386 D KG+I P +AP +I ++ I K D+V + E I+ L + V D D+ Sbjct: 284 HSDSKGLILPPKIAPIEIIIVPIFKRDDEVNKKIIEYATTIFNILKEAKFRVELDRDIKN 343 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +FA +L G P+++ VGS + V + R Sbjct: 344 SPGFRFAAVELKGIPIRIEVGSNDILMDCVTVARR 378 >gi|226355442|ref|YP_002785182.1| prolyl-tRNA synthetase [Deinococcus deserti VCD115] gi|226317432|gb|ACO45428.1| putative Proline--tRNA ligase (prolyl-tRNA synthetase) [Deinococcus deserti VCD115] Length = 499 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 77/407 (18%), Positives = 153/407 (37%), Gaps = 69/407 (16%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLRLADRNDK 102 P G +N+ + + TG + PTL + E+ + + E+ ++ + Sbjct: 56 PYGSALWENIVRWLDDRFKATGHESLVFPTLIPMGFIMKEADHVEGFAPELFTVSKIGTE 115 Query: 103 AM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMK 158 + + PT E ++ ++ + SYR+LPF YQ FR ELR + +R+ EF Sbjct: 116 ELAEPYVMRPTSETIIGHMWSGWLNSYRDLPFLHYQWGSVFRAELRTK-AFLRTSEFFWH 174 Query: 159 DAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 + ++ ++ +M D+ HEF Sbjct: 175 EGHTAHADEPEARGEVRQML--------------------------DIYHEFC------- 201 Query: 219 TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 +D + P+ + + E++ A S E Sbjct: 202 ------RDVLALPV---------VRGEKTASERFAGAVATYS-----------IEGMMRD 235 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G +S F+ + K+ Y S+ I + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHYLGQNFSRAFDVKFQTREQKEEYAHTTSWAISS-RIIGAIIMTHGDDFGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQ--VCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVA 395 I P +AP ++ +I + D E++ L +G V D G G ++ Sbjct: 295 IMPPRIAPIQVVVIPVGRKDNFDAMVQEAEQLAGELRALGLRVKVDKRDGVTNGFKYNDW 354 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +L G P+++ +G + + V +K R + +E + E ++ + R Sbjct: 355 ELKGVPVRIELGPRDLEQGVVVVKGRNSEEKETLERAEAVSGMTARL 401 >gi|78060370|ref|YP_366945.1| threonyl-tRNA synthetase, class IIA [Burkholderia sp. 383] gi|77964920|gb|ABB06301.1| Threonyl-tRNA synthetase, class IIa [Burkholderia sp. 383] Length = 477 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 22/202 (10%) Query: 17 DAEIASHKLMLRTGMIHQHSKG--IYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 D I +KL G+ HQ +G + W P G + +R R G E+ P L Sbjct: 71 DHRILGNKL----GLFHQQQEGPGMVFWHPRGWALYRVLEDYVRMRMRRAGFREIRTPQL 126 Query: 75 QSADLWVESGRYDSYGKEMLRLADR------------NDKAMIYGPTHEEVMTDIFRSHI 122 + LW SG +D +G +M L DR + A+ P +F + Sbjct: 127 LARSLWERSGHWDKFGSQMYALPDRSPIEPSADVDHDDALALCLKPMSCPCHVQVFNQGL 186 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP + + RDE G+ R+R F+ DA+ F + + F + Sbjct: 187 RSYRELPIRYSEFGACHRDEPSGSLEGLKRTRAFVQDDAHVF--CTKSQIENEVARFCNL 244 Query: 182 LR-IFHRLGLKSIPMRAESGPI 202 LR ++ LG S+ + + P+ Sbjct: 245 LRAVYADLGFSSVTVALATRPM 266 >gi|237716078|ref|ZP_04546559.1| threonyl-tRNA synthetase [Bacteroides sp. D1] gi|262407690|ref|ZP_06084238.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|294643798|ref|ZP_06721596.1| threonine--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|294808458|ref|ZP_06767211.1| threonine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] gi|229443725|gb|EEO49516.1| threonyl-tRNA synthetase [Bacteroides sp. D1] gi|262354498|gb|EEZ03590.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|292640887|gb|EFF59107.1| threonine--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|294444386|gb|EFG13100.1| threonine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] Length = 646 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 98/432 (22%), Positives = 164/432 (37%), Gaps = 73/432 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + +I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F PE K +LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPEQVKD-------EFLRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S DF +F D ++ + + W A + EK Sbjct: 410 --------VFRSMDFQNF---EAQISLRDKVNREKYIGSDDNWEKAEQAIIEACAEKGLP 458 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + G+D + H V + Sbjct: 459 AKIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIH 518 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W P+ V IS + +QV K+Y ++ Sbjct: 519 RAPFGSMERFVAVLIEHTA-GKFPLWLTPEQVVILPISEKFNEYAEQV------KMYLKI 571 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 ++ V DD E+IG + ++ P +IVG K + +V ++ + G + M E Sbjct: 572 HEIRAIV--DDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFE 629 Query: 433 EVINYASHRFSN 444 E + N Sbjct: 630 EFAKILNEEVQN 641 >gi|160883804|ref|ZP_02064807.1| hypothetical protein BACOVA_01776 [Bacteroides ovatus ATCC 8483] gi|237722137|ref|ZP_04552618.1| threonyl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|299149166|ref|ZP_07042227.1| threonine--tRNA ligase [Bacteroides sp. 3_1_23] gi|156110889|gb|EDO12634.1| hypothetical protein BACOVA_01776 [Bacteroides ovatus ATCC 8483] gi|229447947|gb|EEO53738.1| threonyl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|298512833|gb|EFI36721.1| threonine--tRNA ligase [Bacteroides sp. 3_1_23] Length = 646 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 98/432 (22%), Positives = 164/432 (37%), Gaps = 73/432 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + +I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F PE K +LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPEQVKD-------EFLRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S DF +F D ++ + + W A + EK Sbjct: 410 --------VFRSMDFQNF---EAQISLRDKVNREKYIGSDDNWEKAEQAIIEACAEKGLP 458 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + G+D + H V + Sbjct: 459 AKIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIH 518 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W P+ V IS + +QV K+Y ++ Sbjct: 519 RAPFGSMERFVAVLIEHTA-GKFPLWLTPEQVVILPISEKFNEYAEQV------KMYLKI 571 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 ++ V DD E+IG + ++ P +IVG K + +V ++ + G + M E Sbjct: 572 HEIRAIV--DDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFE 629 Query: 433 EVINYASHRFSN 444 E + N Sbjct: 630 EFAKILNEEVQN 641 >gi|116333673|ref|YP_795200.1| threonyl-tRNA synthetase [Lactobacillus brevis ATCC 367] gi|122269640|sp|Q03RK3|SYT_LACBA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116099020|gb|ABJ64169.1| Threonyl-tRNA synthetase [Lactobacillus brevis ATCC 367] Length = 647 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 88/417 (21%), Positives = 168/417 (40%), Gaps = 40/417 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + DL+ +SG + Y ++M Sbjct: 262 GLPYWMPNGATIRRTIERYIIDKEVSNGYQHVYTPVLANLDLYKQSGHWAHYREDMFPPM 321 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + ++ HI+SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLELRPMNCPSHIQVYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + PE + + + ++++ +K R LS+ D Sbjct: 382 TLNDGHTF-VAPEQIQDEFKSILDLMVKVYADFDIKDYTFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M + D + L + E A Y DV + +L Sbjct: 427 PKNTEKYFDDDEMWNNAQAMLKGAMDDLGLPYVEAEGEAAFYGPKLDVQTKT---ALGNE 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F ++ L + GADG++H M G + M A + + Sbjct: 484 ETLSTIQLD----FMLPERFDL----HYVGADGEEHRPVMIHRGLVSTMERFTAYLTEIY 535 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++++I + +K+ A L V D GE++G Sbjct: 536 KGAFPTW---LAPKQVTIIPVSEEKHGAY--ADKLAAELKAADIRVNVDKRGEKMGYLIR 590 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK----HRLTGIREDMSLEEVI-NYASHRFSNN 445 A P ++VG +S+ V ++ ++ T + D ++E++ + AS+ N+ Sbjct: 591 DAQTHKIPYTLVVGEDEMSNGSVSVRKYGENQTTSMSSDAFVKEILADIASYSREND 647 >gi|294508573|ref|YP_003572632.1| Prolyl-tRNA synthetase [Salinibacter ruber M8] gi|294344902|emb|CBH25680.1| Prolyl-tRNA synthetase [Salinibacter ruber M8] Length = 490 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 5/153 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF D ++ YV S+G+ + R++ +I + D +G+ Sbjct: 232 GKALQAGTSHFLGQNFAKAFDCTFTNEDNEEEYVWATSWGV-STRLIGGLIMTHSDDQGL 290 Query: 339 IWPDSVAPFKISLINIKAHDQV---CRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAV 394 + P +AP ++ ++ + D + CE++ RL G V D Q G +F+ Sbjct: 291 VLPPKLAPHQVVIVPLFFDDDQEGPVMETCERLQERLEDYGIRVKMDQNHTQSPGWRFSE 350 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +L G PL++ +G + + + VE+ R T +E Sbjct: 351 HELRGVPLRLAIGPRDLENDNVEMARRDTQEKE 383 Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 105 IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 I PT E ++ D + I+SYR+LP + Q R E+RPR +R+ EFL ++ ++ Sbjct: 118 IVRPTSETIIWDTYSKWIQSYRDLPLLYNQWANVVRWEMRPRL-FLRTAEFLWQEGHT 174 >gi|330943371|gb|EGH45740.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B] Length = 640 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 93/434 (21%), Positives = 162/434 (37%), Gaps = 68/434 (15%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + Y L I + RD K+ R G+ H + + G+ W P G + +R+ Q Sbjct: 229 AAYVLRIEEAEKRD----HRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQ 284 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G +E+ P + LW +SG + +Y M + I P + +F Sbjct: 285 RENGYLEIKTPQVVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQG 343 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP + R+E G+MR R F DA+ F E + + F+ Sbjct: 344 LKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIK 401 Query: 181 Y-LRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---P 233 L ++ G K I ++ + P +G D L D E+ + + D P P Sbjct: 402 LTLDVYADFGFKDIELKLSTRPEKRVGSD------ELWDRAESALASALDSAGLPYDLQP 455 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT- 292 E + I + L D L G ++ GT Sbjct: 456 GEGAFYGPKIEFS--------------------LKDCL-------------GRVWQCGTL 482 Query: 293 --KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 ++LP +SA + D + + V + +G+ ++ ++G W +AP Sbjct: 483 QLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPT 539 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + ++NI D ++ L++ G D E+IG + LL P +++G Sbjct: 540 QAVIMNITDKQA---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIG 596 Query: 408 SKFVSDSKVEIKHR 421 + V V ++ R Sbjct: 597 DREVEMQTVAVRTR 610 >gi|197294712|ref|YP_001799253.1| prolyl-tRNA synthetase [Candidatus Phytoplasma australiense] gi|259511611|sp|B1VAN9|SYP_PHYAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|171854039|emb|CAM12012.1| Prolyl-tRNA synthetase [Candidatus Phytoplasma australiense] Length = 474 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 76/143 (53%), Gaps = 2/143 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GT ++ F+ D ++ YV S+G+ + R++ A+I D +G+ Sbjct: 224 GQALQAGTSHYLGTNFAQSFQIQFQDQDHQNKYVHQTSWGV-STRLIGALIMVHSDDEGL 282 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 I P +AP +I +I ++ +++ + +KI+ L K V D + G +F+ +L Sbjct: 283 ILPPYIAPIQIVIIPLQPKNELVQAEAKKIFDDL-KTTYRVHLDLQNKTPGWKFSQYELK 341 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL++ +G++ ++ +V I R Sbjct: 342 GVPLRIEIGARDLAQGEVTIFQR 364 Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust. Identities = 34/160 (21%), Positives = 70/160 (43%), Gaps = 14/160 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG +LP G +N+ + E +TG + P + S L+ E + E Sbjct: 37 KGFIIYLPYGYALWENIQKYLNYEFQKTGHQNVYFPLVFSEKLFQKEKDHIQGFSPEAAM 96 Query: 96 LADRNDK----AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI--QLKFRDELRPRFGV 149 + K ++ PT E + + + I SYR+LP + Q +++ +P Sbjct: 97 ITSTGQKELFEKLVIRPTSEVLFSQYYAKIISSYRDLPKLYNQFCNVVRWEKATKP---F 153 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 +R +EFL ++ ++ T K + ++ + ++++ +LG Sbjct: 154 LRGKEFLWQEGHTVHAT---EKEALDQTLFA-IQLYEKLG 189 >gi|330800299|ref|XP_003288175.1| threonyl-tRNA synthetase [Dictyostelium purpureum] gi|325081805|gb|EGC35308.1| threonyl-tRNA synthetase [Dictyostelium purpureum] Length = 713 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 92/430 (21%), Positives = 180/430 (41%), Gaps = 50/430 (11%) Query: 16 RDAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 ++A + H+ + R + H S G +LP G + + + IR E + G E+ P Sbjct: 313 KEAALRDHRNIGRAQELFFFHPFSPGSAFFLPHGTRIYNKLVDFIRAEYHNRGFSEVISP 372 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 ++ S LW +SG + Y + M + + + P + +F S +SYR LP F Sbjct: 373 SVFSQKLWEQSGHWAKYSENMFNIP-VDKETFSLKPMNCPGHCLMFGSRQRSYRELPLRF 431 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + R+EL G+ R R+F DA+ F T + ++ N ++ G + Sbjct: 432 ADFGVLHRNELAGALTGLTRVRKFQQDDAHIF-CTVDMIENEINSCLEFMQHVYGIFGFE 490 Query: 192 ---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 ++ R E+ G++S E + K F P + D Sbjct: 491 FQLNLSTRPEN--FLGEISQ-------WNEAEKSLEKALNRFGKPWQLNPGDG------- 534 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y D+ +++D L + + ++ F +Y + D K Sbjct: 535 -----AFYGPKIDI---QIYDCLKRAHQCATIQLDFQLPIRFDLEYQ-----SDDATDVK 581 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEK 367 V + +G++ + A++ GK WP V+P + ++ + K H++ K Sbjct: 582 KRPVIIHRAILGSVERMMAILMEHTAGK---WPFWVSPRQAIVVTVAKQHNEYGH----K 634 Query: 368 IYARLSKVG--CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + ++S++G CD+ D+ + IG + A L + ++VG + + ++KV ++ R + Sbjct: 635 VAKQISELGYYCDI--DESDKTIGKKVREAQLAQYNYILVVGQEEIDNNKVNVRTRDNVV 692 Query: 426 REDMSLEEVI 435 R +S+EE++ Sbjct: 693 RGSISVEELV 702 >gi|293372832|ref|ZP_06619210.1| threonine--tRNA ligase [Bacteroides ovatus SD CMC 3f] gi|298480838|ref|ZP_06999033.1| threonine--tRNA ligase [Bacteroides sp. D22] gi|292632207|gb|EFF50807.1| threonine--tRNA ligase [Bacteroides ovatus SD CMC 3f] gi|295085227|emb|CBK66750.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Bacteroides xylanisolvens XB1A] gi|298272861|gb|EFI14427.1| threonine--tRNA ligase [Bacteroides sp. D22] Length = 646 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 98/432 (22%), Positives = 164/432 (37%), Gaps = 73/432 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + +I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F PE K +LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPEQVKD-------EFLRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S DF +F D ++ + + W A + EK Sbjct: 410 --------VFRSMDFQNF---EAQISLRDKVNREKYIGSDDNWEKAEQAIIEACAEKGLP 458 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + G+D + H V + Sbjct: 459 AKIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIH 518 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W P+ V IS + +QV K+Y ++ Sbjct: 519 RAPFGSMERFVAVLIEHTA-GKFPLWLTPEQVVILPISEKFNEYAEQV------KMYLKI 571 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 ++ V DD E+IG + ++ P +IVG K + +V ++ + G + M E Sbjct: 572 HEIRAIV--DDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFE 629 Query: 433 EVINYASHRFSN 444 E + N Sbjct: 630 EFAKILNEEVQN 641 >gi|261406470|ref|YP_003242711.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261282933|gb|ACX64904.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 636 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 159/411 (38%), Gaps = 45/411 (10%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP G + + R Q E+ P + + LW SG +D Y Sbjct: 255 MFSEEAPGMPFFLPNGMIIRNELEQFARGLQFHRDYDEVRTPLMMNKRLWEMSGHWDHY- 313 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 K+ + ++ P + ++++ + SYR LP + R E G+ Sbjct: 314 KDNMYFTQVDETEYALKPMNCPGHMLVYKNSLHSYRELPIRISEFGQVHRHEFSGALNGM 373 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F DA+ F + P+ + ++ R++ G + + + P S E Sbjct: 374 MRVRTFCQDDAHIF-VRPDQIQEEIKQVIDFISRVYQVFGFEYT-IELSTRPEDSMGSEE 431 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 A+T QV D + P D A Y D H + D Sbjct: 432 LWEQAETSLQQVL---DQLGLPYRINEGD--------------GAFYGPKIDFH---ILD 471 Query: 270 SLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVV 325 SL R + G I F F K+ L ++ G D + H V + G++ Sbjct: 472 SL-------KRSWQCGTIQLDFQFPEKFDL----SYIGEDNQKHRPVVIHRAVFGSIERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP ++ +I + H D K+ RL G V D Sbjct: 521 IGILTEHYGGAFPMW---LAPVQVMIIPVSDH---YIDYSLKVKKRLENAGIRVNVDVRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E++G + A LL P +++G K + V ++ R G ++++++VI Sbjct: 575 EKLGYKIREAGLLKTPYTLVLGEKEMDSDHVSVRKRGEGELGEIAIDQVIE 625 >gi|81301415|ref|YP_401623.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 7942] gi|123769177|sp|Q31JY3|SYT_SYNE7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81170296|gb|ABB58636.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Synechococcus elongatus PCC 7942] Length = 604 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 84/422 (19%), Positives = 163/422 (38%), Gaps = 44/422 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +++EQ + G + P L DL+ SG + +Y ++M + Sbjct: 217 GLPLWTPKGTILRSTLEDFLKQEQMKRGYQSVVTPHLARVDLFKVSGHWQNYREDMFPMM 276 Query: 98 DRNDKA------MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +D+A + P + I+++ ++SYR LP + +R E G+ Sbjct: 277 AEDDEARGLEQGFVLKPMNCPFHIQIYKNELRSYRELPIRLAEFGTVYRYEQSGELGGLT 336 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F + D++ F + P+ + + L +F L LK R S ++ Sbjct: 337 RVRGFTVDDSHLF-VRPDQLASEFLSVVDLILSVFKALNLKKFKARLS---FRDPESDKY 392 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 I D E K +E D I + A Y D + D Sbjct: 393 IGSDDVWE------KAESAIQAAAETLGMDYFIGVGE-----AAFYGPKLDFIFQDALD- 440 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 R ++G + Y+LP + DG + V + G++ + Sbjct: 441 ---------REWQLGTV---QVDYNLPERFDLEYVAEDGSRQRPVMIHRAPFGSLERLIG 488 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G +W +AP +I L+ + + D C+++ +L +G V D G++ Sbjct: 489 ILIEEYAGDFPLW---LAPEQIRLLPVT---ETVLDYCQQVADQLRAIGVRVQVDCSGDR 542 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 +G A+ P+ ++G++ + I+ R TG +++ ++ S + P Sbjct: 543 LGKLIRNAEKAKIPVMAVIGAQEAESETLSIRTRATGDLGSLTVADLTKRLSSAIAEKLP 602 Query: 448 VL 449 L Sbjct: 603 HL 604 >gi|229077749|ref|ZP_04210378.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock4-2] gi|228705571|gb|EEL57928.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock4-2] Length = 476 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKGTGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVSMDQL 376 >gi|320333471|ref|YP_004170182.1| threonyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] gi|319754760|gb|ADV66517.1| threonyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] Length = 649 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/393 (21%), Positives = 153/393 (38%), Gaps = 44/393 (11%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + +RE+Q G + P + + +L+ SG Y +Y Sbjct: 266 GKGLPMWLPNGTILREELTRFLREQQFARGYQGVVTPNIGNLELYKTSGHYQNYSDSNFS 325 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +D+ + P + I+ S +SYR+LP + +R E G+ R R Sbjct: 326 PITVDDEQYMLKPMNCPHHVRIYASKPRSYRDLPVRLAEFGTVYRYEQSGELNGLTRVRG 385 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F P+ K + + + + G+ + R + Sbjct: 386 FTQDDAHLF-CRPDQLKAEFLNVLDLTVLVLRTFGMNDVRFR--------------VGTR 430 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA---ATSDVHNEKLFDSL 271 D T+ ++D + N II VE+ PY+ + + KL + Sbjct: 431 DPENTKYVGAED-------NWNAAERQII---EAVEEVGLPYSIEPGDAAFYGPKLDFVV 480 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAV 328 + V R ++G I Y+LP ++ G DG DH + + G++ + Sbjct: 481 ---RDVLGREWQLGTI---QVDYNLPERFDISYVGEDGADHRPIMIHRAPFGSLERFVGI 534 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G +W +AP ++++I I A E A L G DD ++ Sbjct: 535 LIEHYGGDFPLW---LAPRQVAIIPIADRHNEYAYALE---AELRAAGLRTEVDDSSNRM 588 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ A+L P+ +IVG K +V ++ R Sbjct: 589 NAKVRAAELSKIPVMLIVGDKEQEGRQVSVRER 621 >gi|312870359|ref|ZP_07730484.1| threonine--tRNA ligase [Lactobacillus oris PB013-T2-3] gi|311094060|gb|EFQ52379.1| threonine--tRNA ligase [Lactobacillus oris PB013-T2-3] Length = 600 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 83/403 (20%), Positives = 155/403 (38%), Gaps = 35/403 (8%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I + + G + P L + D + SG ++ Y +M Sbjct: 216 GLPYWMPKGATIRRTIERYIIDREVADGYEHVYTPVLMNLDAYKTSGHWEHYRDDMFPPM 275 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 276 DMGDGEMLEIRPMNCPSHIQIYKHHIRSYRDLPMRIAELGMMHRYEKSGALSGLQRVREM 335 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R + L D Sbjct: 336 TLNDGHTF-VAVDQIRDEFAKILNLIMDVYKDFDITDYSFR--------------LSLRD 380 Query: 216 TGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + + D M D DD+ E A Y D+ + +L + Sbjct: 381 PKNKEKYYGNDEMWDESQKLLKAAMDDLNLDYYEAEGEAAFYGPKLDIQTKT---ALGND 437 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ FG Y G DGK+H M GI G M A + + Sbjct: 438 ETMSTIQLDFMQPDRFGLSYV--------GKDGKEHMPVMIHRGIVGTMERFVAYLTEIY 489 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++ +I + ++ D +K+ ++ V DD E++G + Sbjct: 490 KGAFPTW---LAPEQVHIIPVS--EEKHGDYAQKLADKMKAAQIRVVVDDRNEKMGYKIR 544 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A P ++VG V ++ V ++ + MS ++ +N Sbjct: 545 EAQTQKVPYTLVVGDDEVKNNAVSVRKYGEDAQNSMSQDDFMN 587 >gi|255034032|ref|YP_003084653.1| prolyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] gi|254946788|gb|ACT91488.1| prolyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] Length = 491 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 85/170 (50%), Gaps = 5/170 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F+ +GK YV S+G+ + R++ A+I + D G+ Sbjct: 233 GKALQAGTSHFLGQNFANAFDVKFQDKEGKLDYVWGTSWGV-STRLMGALIMAHSDDAGL 291 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ EK I L K+G V +D + G +FA Sbjct: 292 VLPPKLAPIQVVIVPIYRNDEQLAQISEKVAEITKDLKKLGISVKYDSSDNAKPGFKFAE 351 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +L G P+++ +G + + + VE+ R T +E +S+ + Y + ++ Sbjct: 352 YELKGVPVRLAMGGRDLENGTVEVARRDTKTKETVSVAGIAAYVQNLLND 401 Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E V+ +++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 115 EEELIVRPTSETVIWSTYKNWIQSYRDLPLLINQWANVVRWEMRTRL-FLRTAEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T + + +M Y Sbjct: 174 HTAHATAQEAIAETKQMLEVY 194 >gi|326804116|ref|YP_004321934.1| proline--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] gi|326650465|gb|AEA00648.1| proline--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] Length = 484 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 81/161 (50%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GT ++ + + + Y S+G+ + R++ +I + D KG+ Sbjct: 221 TKSVQAGTSHYLGTNFAEAFDIKYLNTENQHVYAHTSSWGV-STRLIGTMIMAHGDEKGV 279 Query: 339 IWPDSVAPFKISLI---NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 ++P +AP +I+LI N+K + +V E I L G + DD G ++ A Sbjct: 280 VFPPKMAPIQIALIPVGNVKKNPEVLT-RLEAIEKDLQAAGYSTYLDDSNNSAGYKYNEA 338 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 ++ G PL++ G + + + + IK R +E ++L+++++ Sbjct: 339 EVKGVPLRIEFGPRDMENGQCMIKMRDLEDKEAVNLDDLLD 379 >gi|282855610|ref|ZP_06264924.1| threonine--tRNA ligase [Pyramidobacter piscolens W5455] gi|282586540|gb|EFB91794.1| threonine--tRNA ligase [Pyramidobacter piscolens W5455] Length = 640 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 92/411 (22%), Positives = 153/411 (37%), Gaps = 70/411 (17%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H G + P G ++ + + R G E P + + DLW+ SG +D Y + Sbjct: 251 LHNEGVGFPFFHPKGMVVMNKLMSFWRRLHFLNGYTEARTPQILNRDLWLRSGHWDHY-R 309 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D P + I+++ SYR LP ++ + R EL G+M Sbjct: 310 ENMYFTTIDDIPHAIKPMNCPGGIIIYKTSKHSYRELPIRMGELGVVHRHELSGALHGLM 369 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF-HRLGLK---SIPMRAESGPIGGDL 206 R R F DA+ F TPE K + ++ H G K + R E+ +G D Sbjct: 370 RVRCFTQDDAHHF-CTPEQIKDEVKLIMKLNDYVYTHVFGFKYHVELSTRPENS-MGSDE 427 Query: 207 SHEFI------VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS 260 E LA+TG V D A Y Sbjct: 428 LWEIAENALSETLAETGTPYVLNPGD--------------------------GAFYGPKI 461 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQM 314 D H E +G + GT +++P T+ GADG++H V + Sbjct: 462 DFHLEDC----------------IGRTWQCGTIQLDFTMPEKFDMTYVGADGREHRPVML 505 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLS 373 +G++ ++ ++ G W +AP ++ L+ + H R+ EK L Sbjct: 506 HRTILGSIERFMGILIENYAGAFPYW---LAPVQVKLLAVSDDHLPYAREVAEK----LQ 558 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + V D E++G + A + P +++G K V V ++ R G Sbjct: 559 NLNVRVEIDRRDEKLGRKIRDAQMEKVPYMLVIGDKEVEARTVAVRDRAKG 609 >gi|288870320|ref|ZP_06113698.2| proline--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288867624|gb|EFC99922.1| proline--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 479 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/329 (21%), Positives = 129/329 (39%), Gaps = 67/329 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + D + I SYR+LP + Q +++ RP +RSREFL ++ ++ Sbjct: 116 PTSETLFCDFYARDIHSYRDLPKVYNQWCSVVRWEKTTRP---FLRSREFLWQEGHTAHA 172 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 T E ++ +M Y AD FC + Sbjct: 173 TAEDAQARTEQMLNLY--------------------------------AD------FCEE 194 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 I + TD + A Y + +H+ K S G Sbjct: 195 VLAMPVIRGQKTDKEKFAGAE-------ATYTIEALMHDGKALQS--------------G 233 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 FG ++ + + K YV S+G+ + R++ +I D G++ P +A Sbjct: 234 TSHNFGDGFAKAFEIQYSDKENKLQYVHQTSWGM-STRLIGGIIMVHGDDNGLVLPPRIA 292 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P ++ ++ I+ + + +I + LS G V DD + G +FA +++ G P++V Sbjct: 293 PVQVMIVPIQQAKEGVLEKAAEIKSVLS--GYRVKVDDTDKSPGWKFAESEMRGIPVRVE 350 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G K + + + R T + +SLEE+ Sbjct: 351 IGPKDIEAGQAILVRRDTHEKISVSLEEI 379 >gi|253682125|ref|ZP_04862922.1| threonine--tRNA ligase [Clostridium botulinum D str. 1873] gi|253561837|gb|EES91289.1| threonine--tRNA ligase [Clostridium botulinum D str. 1873] Length = 637 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 91/416 (21%), Positives = 169/416 (40%), Gaps = 54/416 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G + P G + + RE + G E+ P + + +LW +SG +D Y + Sbjct: 255 LKEEGPGFPFFYPKGMTLRNTLENYWREMHEKAGYGEIRTPIILNENLWHQSGHWDHYKE 314 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + +++S + SYR LP ++ L R E G+ Sbjct: 315 NMYFTKIDGEDYAI--KPMNCPGSILVYKSDLHSYRELPIRLGELGLVHRHEYSGALHGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYN--KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 MR R F DA+ F + + KM ++ +F + R E +G D Sbjct: 373 MRVRNFTQDDAHIFMTKEQITSEILGVIKMIDNFYSLFGFEYFVELSTRPEDS-MGSDED 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A T ++ +++ I + F Y D H L Sbjct: 432 WE----AATNGLVKALNEAGLEYKINEGDGAF----------------YGPKIDFH---L 468 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMR 323 D L R + G I F ++ L ++ GADG+ H M I G++ Sbjct: 469 RDCL-------GRTWQCGTIQLDFQMPERFDL----SYVGADGEKHRPVMAHRVIFGSIE 517 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++NI +Q+ + C++I L + G V D Sbjct: 518 RFIGILTEHYAGA---FPTWLAPVQVKIMNI-TDNQI--EYCKEIEKTLKENGIRVELDL 571 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 E+IG + A L P +++G K ++++ + ++ R G D+ +++++ + Sbjct: 572 RNEKIGYKIREAQLQKIPYMLVLGDKEMNENTIAVRSRKQG---DLGAMQLVDFVA 624 >gi|15604092|ref|NP_220607.1| threonyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E] gi|2501061|sp|O05947|SYT_RICPR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2073475|emb|CAA72469.1| threonyl-tRNA synthetase [Rickettsia prowazekii] gi|3860783|emb|CAA14684.1| THREONYL-TRNA SYNTHETASE (thrS) [Rickettsia prowazekii] gi|292571818|gb|ADE29733.1| Threonyl-tRNA synthetase [Rickettsia prowazekii Rp22] Length = 635 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + ++G+ W G + + IR++ + G IE+ P L LW SG + + + Sbjct: 256 QEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYIEVKTPVLVDKSLWEASGHWAKFRCD 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M L + +DK + P + IF+ IKSYR+LP + L R+E G+MR Sbjct: 316 MFTL-ETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGLMR 374 Query: 152 SREFLMKDAYSF 163 R + DA+ F Sbjct: 375 VRSLVQDDAHIF 386 >gi|229068144|ref|ZP_04201451.1| Prolyl-tRNA synthetase 2 [Bacillus cereus F65185] gi|228714958|gb|EEL66826.1| Prolyl-tRNA synthetase 2 [Bacillus cereus F65185] Length = 476 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 81/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ +I E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVIDEKLKGTGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ A + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQAHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E + ++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQL 376 >gi|323484406|ref|ZP_08089772.1| hypothetical protein HMPREF9474_01523 [Clostridium symbiosum WAL-14163] gi|323402184|gb|EGA94516.1| hypothetical protein HMPREF9474_01523 [Clostridium symbiosum WAL-14163] Length = 645 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 94/411 (22%), Positives = 163/411 (39%), Gaps = 69/411 (16%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+H G +LP G + + + R+ + G +E+S P + + LW SG +D Y Sbjct: 255 MMHDAGPGFPFFLPKGMELKNTLLEYWRQIHKKAGYVEISTPVILNRKLWETSGHWDHYK 314 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M + D D A+ P + + S +SYR+LP ++ L R E + G Sbjct: 315 DNMYTTVIDEEDYAI--KPMNCPGGVLAYASEPRSYRDLPLRMGELGLVHRHEKSGQLHG 372 Query: 149 VMRSREFLMKDAYSFDLTPE-------GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 +MR R F DA+ F +TP+ G H N+++ + +H + L + P + Sbjct: 373 LMRVRCFTQDDAHIF-MTPDQIKDEIKGVAHLINEVYSLFGFKYH-VELSTRPEDSMGSD 430 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT-APYAATS 260 +++ E + LA D + L+ +V + A Y Sbjct: 431 EDWEMATEGLRLA-------------------------LDELGLDYVVNEGDGAFYGPKI 465 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQM 314 D H E DS +G + GT + LP + GADG+ H + + Sbjct: 466 DFHLE---DS-------------IGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPIMI 509 Query: 315 GSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 G++ R + +IE +P +AP ++ ++ I D+ D + + L Sbjct: 510 HRVAFGSIERFIGILIEHFAGA----FPTWLAPVQVKVLPIS--DKYA-DYAKTVLEELE 562 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + G D E+IG + A P ++VG K + V ++ R G Sbjct: 563 EAGIRAELDTRSEKIGYKIREAQTQKIPYMLVVGQKEEEEGNVSVRSRFAG 613 >gi|323692417|ref|ZP_08106653.1| threonine-tRNA ligase [Clostridium symbiosum WAL-14673] gi|323503557|gb|EGB19383.1| threonine-tRNA ligase [Clostridium symbiosum WAL-14673] Length = 645 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 95/407 (23%), Positives = 158/407 (38%), Gaps = 61/407 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+H G +LP G + + + R+ + G +E+S P + + LW SG +D Y Sbjct: 255 MMHDAGPGFPFFLPKGMELKNTLLEYWRQIHKKAGYVEISTPVILNRKLWETSGHWDHYK 314 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M + D D A+ P + + S +SYR+LP ++ L R E + G Sbjct: 315 DNMYTTVIDEEDYAI--KPMNCPGGVLAYASEPRSYRDLPLRMGELGLVHRHEKSGQLHG 372 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGD 205 +MR R F DA+ F +TP+ K + ++ G K + R E +G D Sbjct: 373 LMRVRCFTQDDAHIF-MTPDQIKDEIKGVAHLINEVYSLFGFKYHVELSTRPEDS-MGSD 430 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT-APYAATSDVHN 264 E +A G D + L+ +V + A Y D H Sbjct: 431 EDWE---MATEGLRSAL------------------DELGLDYVVNEGDGAFYGPKIDFHL 469 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYG 318 E DS +G + GT + LP + GADG+ H + + Sbjct: 470 E---DS-------------IGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPIMIHRVA 513 Query: 319 IGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ R + +IE +P +AP ++ ++ I D+ D + + L + G Sbjct: 514 FGSIERFIGILIEHFAGA----FPTWLAPVQVKVLPIS--DKYA-DYAKTVLEELEEAGI 566 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 D E+IG + A P ++VG K + V ++ R G Sbjct: 567 RAELDTRSEKIGYKIREAQTQKIPYMLVVGQKEEEEGNVSVRSRFAG 613 >gi|319938817|ref|ZP_08013181.1| threonyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] gi|319811867|gb|EFW08133.1| threonyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] Length = 650 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 88/411 (21%), Positives = 165/411 (40%), Gaps = 47/411 (11%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G V I + + G + P L S +L+ SG ++ Y ++M Sbjct: 261 QGLPFWLPDGATIRRIVERYITDREVNDGYQHVYTPPLASVELYKTSGHWEHYQEDMFPP 320 Query: 97 ADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D D + + P + +++++H+ SYR LP ++ + R E G+ R RE Sbjct: 321 MDMGDGEQFVLRPMNCPHHIEVYKNHVHSYRELPIRIAELGMMHRFEKSGALSGLQRVRE 380 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + D++ F + PE + + + + ++ + R + Sbjct: 381 MTLNDSHLF-VMPEQIQEEFKHVLDLMIDVYKDFNITDYRFR--------------LSYR 425 Query: 215 DTGETQVFCSKDFMDFPIPSENTD------FDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 D + + D M EN DD+ E A Y DV ++ Sbjct: 426 DPNDKHKYFDNDEM-----WENAQRMLKGAMDDLGLDYFEAEGEAAFYGPKLDV---QVK 477 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVA 326 +L + +S ++ F ++ L + GADG++H M GI + R +A Sbjct: 478 TALGNEETLSTIQLD----FLLPERFDL----HYVGADGEEHRPVMIHRGIVSTMERFIA 529 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 +IE+ KG +P +AP ++++I I ++ D K+ L G V D+ E Sbjct: 530 YLIETY---KG-AFPTWLAPHQVTVIPIS--NEAHADYAWKVAKELRNRGVRVDVDERNE 583 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ + + P Q+IVG K +D V ++ ++ E +N+ Sbjct: 584 KMQYKIRQSQTHKVPYQLIVGDKEQADGTVNVRRYGQKQTHTETIAEFVNH 634 >gi|219853874|ref|YP_002470996.1| hypothetical protein CKR_0531 [Clostridium kluyveri NBRC 12016] gi|219567598|dbj|BAH05582.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 481 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 75/145 (51%), Gaps = 2/145 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YFG ++ P + +GK YV S+GI R++ A+I D G+ Sbjct: 228 GKALQSGTSHYFGQNFAKPFEMQYLDKNGKLQYVYQTSWGI-TTRIIGALIMVHGDDNGL 286 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ ++ I H + + +++ LSK+ V DD + G +F+ ++ Sbjct: 287 VVPPRIAPLQVIIVPIAQHKEGVLEKADELKEELSKI-VRVKIDDSDKMPGWKFSEHEMK 345 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLT 423 G P+++ VG K ++ ++V + R T Sbjct: 346 GVPIRLEVGPKDIAKNQVVLVRRDT 370 >gi|153953239|ref|YP_001394004.1| prolyl-tRNA synthetase [Clostridium kluyveri DSM 555] gi|146346120|gb|EDK32656.1| ProS [Clostridium kluyveri DSM 555] Length = 476 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 75/145 (51%), Gaps = 2/145 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YFG ++ P + +GK YV S+GI R++ A+I D G+ Sbjct: 223 GKALQSGTSHYFGQNFAKPFEMQYLDKNGKLQYVYQTSWGI-TTRIIGALIMVHGDDNGL 281 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ ++ I H + + +++ LSK+ V DD + G +F+ ++ Sbjct: 282 VVPPRIAPLQVIIVPIAQHKEGVLEKADELKEELSKI-VRVKIDDSDKMPGWKFSEHEMK 340 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLT 423 G P+++ VG K ++ ++V + R T Sbjct: 341 GVPIRLEVGPKDIAKNQVVLVRRDT 365 >gi|16081983|ref|NP_394395.1| prolyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728] gi|74581452|sp|Q9HJN0|SYP_THEAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|10640252|emb|CAC12066.1| prolyl-tRNA synthetase related protein [Thermoplasma acidophilum] Length = 462 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 90/404 (22%), Positives = 154/404 (38%), Gaps = 95/404 (23%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL----------------QSADLW 80 KG+ WLP G K + +++I+R ++ E++ P L ++ W Sbjct: 29 KGMNVWLPYGWKIMSLIDSIVRRAVDKRNFQEVNFPILIGRSMLEVEFEHIRGFENEIYW 88 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 V G GKE L ++ + PT E M +F I+S+ +LP YQI +R Sbjct: 89 VTKG-----GKEKL------EEELALRPTSESAMYPMFSLWIRSHADLPLKIYQIVSVYR 137 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG-LKSIPMRAES 199 E + +R RE +A++ T E ++ ++ Y I+ + L +P + Sbjct: 138 YETKHTRSFIRIREIHFFEAHTAHATYEDAEAQMDQ----YKEIWREISSLLCLPYFYDQ 193 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 P D+ FP FD + Sbjct: 194 RP------------------------DWDKFPGAMYTIAFDTV----------------- 212 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 LP S R +++G I +GT +S + DG Y +YG+ Sbjct: 213 -----------LP-----SGRSLQIGTIHQYGTNFSKNYDIKYLKEDGTFDYAHQTTYGM 256 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD--QVCRDACEKIYARLSKVGC 377 R++AA+I D KG++ P VAP ++ +I I + RD + + +V Sbjct: 257 SE-RLLAAIIGIHGDDKGLVLPPDVAPIQVIIIPIPGAGVMEYARDVENTLNSINIRVKV 315 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D D G +F ++ G PL++ +G + V + + I R Sbjct: 316 D---DRENYTPGYKFNDWEMRGVPLRIEIGEREVKNRTLTISMR 356 >gi|238650420|ref|YP_002916272.1| threonyl-tRNA synthetase [Rickettsia peacockii str. Rustic] gi|259516667|sp|C4K0X3|SYT_RICPU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238624518|gb|ACR47224.1| threonyl-tRNA synthetase [Rickettsia peacockii str. Rustic] Length = 635 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 Y L + + RD KL + H + ++G+ W G + + IR++ + Sbjct: 231 YLLMLEEAEKRD----HRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L LW SG ++ + +M L + +DK + P + IF+ IK Sbjct: 287 NGYTEVKTPVLVDKSLWEASGHWEKFRDDMFAL-ETDDKTLALKPMNCPCHVQIFKQGIK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP + L R+E G+MR R + DA+ F Sbjct: 346 SYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIF 386 >gi|150400311|ref|YP_001324078.1| prolyl-tRNA synthetase [Methanococcus vannielii SB] gi|171460844|sp|A6USJ4|SYP_METVS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150013014|gb|ABR55466.1| prolyl-tRNA synthetase [Methanococcus vannielii SB] Length = 461 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 85/421 (20%), Positives = 158/421 (37%), Gaps = 70/421 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG +LP G K I+R+ + T E P L +L + G + ++ + Sbjct: 24 KGCGVYLPYGFKIRRYSFEILRKLLDDTNHDETLFPMLIPENLLAKEGEHIKGFEDEVYW 83 Query: 97 ADRNDKA-----MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 K+ + PT E M + + IK + +LP YQ+ FR E + ++R Sbjct: 84 VTHGGKSPLEIKLALRPTSETTMYYMMKQWIKVHTDLPMKLYQVVNTFRYETKHTRPLIR 143 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE + K+A++ T + + Y + F + IP+ P Sbjct: 144 LREIMSFKEAHTAHSTQDDCNKQIKEAIEIYGKFFDEI---CIPVIISKRP--------- 191 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ FP FD I Sbjct: 192 ---------------EWDKFPGADYTMAFDTI---------------------------- 208 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 P+ K +++G + G ++ F+ DG Y YGI R +A++I Sbjct: 209 FPDGKT-----MQIGTVHNLGQNFAKTFELEFETPDGNKDYAYQTCYGISD-RAIASLIA 262 Query: 331 SSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 D KG++ P VAP +I LI + K +++ + +++ +++ K V DD + Sbjct: 263 IHGDEKGLVIPIDVAPIQIVLIPLLFKGKEEIVIEKIKEL-SKILKTKYRVHVDDRDIRP 321 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 G ++ ++ G PL++ +G + + + K I R G + + ++N F + + Sbjct: 322 GRKYNDWEIKGVPLRIEIGPRDIEEGKAVIVRRDNGQKMTVEAFNILNEVEKTFEDYKAS 381 Query: 449 L 449 L Sbjct: 382 L 382 >gi|229154159|ref|ZP_04282283.1| Prolyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342] gi|228629295|gb|EEK85998.1| Prolyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342] Length = 502 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 62 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 121 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 122 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 178 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 179 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 212 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 213 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 248 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 249 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 297 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 298 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 356 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E ++++++ Sbjct: 357 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMDQL 402 >gi|325269446|ref|ZP_08136063.1| proline--tRNA ligase [Prevotella multiformis DSM 16608] gi|324988367|gb|EGC20333.1| proline--tRNA ligase [Prevotella multiformis DSM 16608] Length = 493 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 85/161 (52%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ T+ D K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTYLNKDNKPEYVWATSWGV-STRLIGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYA---RLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++++I I ++ ++ EK+ L +G V +DD ++ G +FA Sbjct: 295 VLPPRIAPIQVAVIPIFKGEEQLKELSEKLQPVIDDLRSLGITVKYDDSDNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++ +G + + ++ +E+ R T +E +S + ++ Sbjct: 355 YELKGVPVRLAMGGRDLENNTIEVMRRDTLEKESVSFDGIV 395 >gi|299140723|ref|ZP_07033861.1| proline--tRNA ligase [Prevotella oris C735] gi|298577689|gb|EFI49557.1| proline--tRNA ligase [Prevotella oris C735] Length = 493 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 86/161 (53%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF + K YV S+G+ + R++ A+I D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGV-STRLMGALIMVHSDDNGL 294 Query: 339 IWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I K DQ+ + + + +L ++G V +DD ++ G +FA Sbjct: 295 VLPPKLAPIQVIIVPIYKGDDQLKAISNKLQPVINKLEELGISVKYDDSDNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++++G + + ++ +EI R T +E +S + +I Sbjct: 355 YELKGIPVRLVMGGRDLENNTIEIMRRDTLEKESVSFDGII 395 >gi|148545068|ref|YP_001272438.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus reuteri DSM 20016] gi|148532102|gb|ABQ84101.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus reuteri DSM 20016] Length = 601 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 85/405 (20%), Positives = 163/405 (40%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I + + G + P L + D + SG ++ Y +M Sbjct: 217 GLPYWLPKGATIRRTIERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWEHYRDDMFPPM 276 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + +++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 277 DMGDGEMLELRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRYEKSGALSGLQRVREM 336 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F +T + + + K+ + ++ + R + L D Sbjct: 337 TLNDGHTF-VTLDQIRSEFAKILKLIMSVYEDFDITDYSFR--------------LSLRD 381 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M S D ++L+ E A Y D+ + +L + Sbjct: 382 PKNVKKYYANDEMWEKSQSMLKSAMDDLNLDYYEAEGEAAFYGPKLDIQTKT---ALGND 438 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F ++ L ++ G DGK+H M G +G M A + + Sbjct: 439 ETMSTIQLD----FMLPERFGL----SYVGQDGKEHQPVMIHRGVVGTMERFMAYLTEIY 490 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N +AH + D +K+ A +V D E++G + Sbjct: 491 KGAFPTW---LAPEQVHIIPVNEEAHGEYADDLAKKMKAANIRVNV----DHRNEKMGYK 543 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A P ++VG +++ V ++ + +MS E +N Sbjct: 544 IREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMSQEAFMN 588 >gi|34580760|ref|ZP_00142240.1| threonyl-tRNA synthetase [Rickettsia sibirica 246] gi|28262145|gb|EAA25649.1| threonyl-tRNA synthetase [Rickettsia sibirica 246] Length = 635 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 Y L + + RD KL + H + ++G+ W G + + IR++ + Sbjct: 231 YLLMLEEAEKRD----HRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L LW SG ++ + +M L + +DK + P + IF+ IK Sbjct: 287 NGYTEVKTPVLVDKSLWEASGHWEKFRDDMFAL-ETDDKTLALKPMNCPCHVQIFKQGIK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP + L R+E G+MR R + DA+ F Sbjct: 346 SYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIF 386 >gi|301052111|ref|YP_003790322.1| prolyl-tRNA synthetase [Bacillus anthracis CI] gi|300374280|gb|ADK03184.1| prolyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 476 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|78486008|ref|YP_391933.1| threonyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] gi|123769059|sp|Q31F14|SYT_THICR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78364294|gb|ABB42259.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Thiomicrospira crunogena XCL-2] Length = 642 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 89/415 (21%), Positives = 155/415 (37%), Gaps = 46/415 (11%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G V +R++ E+ P + LW +SG +D + M Sbjct: 259 APGMAFWHPKGSTLYRVVENYMRQQLVENDYQEIRTPLIMDRTLWEKSGHWDKFKDNMFT 318 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 N + P + ++ ++ SYR+LP + L R+E G+MR R Sbjct: 319 TETENRDYAV-KPMNCPGHIQVYNHNLSSYRDLPIRLAEFGLVHRNEPSGTLHGLMRVRS 377 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFI 211 F DA+ F TPE K + G +I ++ + P +G D + Sbjct: 378 FTQDDAHIF-CTPEQIKEEVQACIDLVFNTYADFGFDNIQVKFSTRPEQRVGED---DVW 433 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 LA+ Q + P E + I +L D + Sbjct: 434 DLAEEALEQTLKDANLEYALQPGEGAFYGPKIEF--------------------QLKDCI 473 Query: 272 PENKRVSARGIEVGHI-FYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVI 329 R + G I F ++A + GAD + H+ M I G++ ++ Sbjct: 474 -------GRVWQCGTIQLDFSMTQEERLNAVYIGADNEKHHPVMIHRAILGSLERFVGIL 526 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 ++GK W +AP ++ + +I H++ D +K L K G V D E++ Sbjct: 527 VEHYEGKFPTW---LAPTQLVIASIADVHNEYVNDFAKK----LKKHGFRVESDLRNEKV 579 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G + L P ++VG + + + V ++ R S EE+I++ S S Sbjct: 580 GFKIREHTLQRVPYILVVGDQEMENGTVNVRARGGENLGSFSFEELIDHLSEDVS 634 >gi|157828174|ref|YP_001494416.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|166225494|sp|A8GR83|SYT_RICRS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157800655|gb|ABV75908.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] Length = 635 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 Y L + + RD KL + H + ++G+ W G + + IR++ + Sbjct: 231 YLLMLEEAEKRD----HRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L LW SG ++ + +M L + +DK + P + IF+ IK Sbjct: 287 NGYTEVKTPVLVDKSLWEASGHWEKFRDDMFAL-ETDDKTLALKPMNCPCHVQIFKQGIK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP + L R+E G+MR R + DA+ F Sbjct: 346 SYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIF 386 >gi|255692010|ref|ZP_05415685.1| threonine--tRNA ligase [Bacteroides finegoldii DSM 17565] gi|260622256|gb|EEX45127.1| threonine--tRNA ligase [Bacteroides finegoldii DSM 17565] Length = 646 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 98/432 (22%), Positives = 164/432 (37%), Gaps = 73/432 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + +I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K +LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPDQVKD-------EFLRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S +F +F D ++ + + W A + EK Sbjct: 410 --------VFRSMNFQNF---EAQISLRDKVNREKYIGSDDNWEKAEQAIIEACEEKGLP 458 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + G+D + H V + Sbjct: 459 AKIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIH 518 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W PD VA IS + +QV K+Y + Sbjct: 519 RAPFGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPISEKFNEYAEQV------KMYLKT 571 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 ++ V DD E+IG + ++ P +IVG K + +V ++ + G + M E Sbjct: 572 HEIRAIV--DDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFE 629 Query: 433 EVINYASHRFSN 444 E + N Sbjct: 630 EFAKILNEEVQN 641 >gi|225013012|ref|ZP_03703428.1| threonyl-tRNA synthetase [Flavobacteria bacterium MS024-2A] gi|225002828|gb|EEG40808.1| threonyl-tRNA synthetase [Flavobacteria bacterium MS024-2A] Length = 648 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 88/449 (19%), Positives = 166/449 (36%), Gaps = 62/449 (13%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 ++Y + + RD +L L T + +G+ WLP G + + ++ QN+ Sbjct: 229 TEYLELVEEAKKRDHRKLGKELELFT-FSQKVGQGLPLWLPKGAALRERLENFLKAAQNK 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSH 121 G ++ P + S +L++ SG Y+ YG + + + + P + +I+ + Sbjct: 288 AGYEQVISPHIGSKELYMTSGHYEKYGADSFQPIQTPAEGEEFLLKPMNCPHHCEIYNAK 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SYR+LP + + +R E G+ R R F DA+ F + P + K+ Sbjct: 348 PWSYRDLPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCM-PSQLDDEFKKVIDL 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 L +F LG ++ + + L D + + + Sbjct: 407 VLYVFGSLGFENFTAQ--------------VSLRDPEKPEKYIGS--------------- 437 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT 292 W A + EK D + E + G + +G + GT Sbjct: 438 --------THNWELAEQAIINAAKEKNLDYVIETGEAAFYGPKLDFMVKDALGRKWQLGT 489 Query: 293 ---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 Y+LP +KG+D + H V + G++ A++ G +W + P Sbjct: 490 IQVDYNLPERFDLNYKGSDNELHRPVMIHRAPFGSLERFVAILLEHTGGNFPLW---LMP 546 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 + +NI + C++ K+ L DD E IG + +++ P +I+ Sbjct: 547 ---NQVNILCVSEKCKNYALKVSNFLENHEIRALLDDRNETIGKKIRESEISKVPYMIII 603 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G K + V ++ G S E V+ Sbjct: 604 GEKEEENQTVSLRKHSEGDLGSFSTESVV 632 >gi|229586468|ref|YP_002844969.1| threonyl-tRNA synthetase [Rickettsia africae ESF-5] gi|259516664|sp|C3PMR6|SYT_RICAE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|228021518|gb|ACP53226.1| Threonyl-tRNA synthetase [Rickettsia africae ESF-5] Length = 635 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 Y L + + RD KL + H + ++G+ W G + + IR++ + Sbjct: 231 YLLMLEEAEKRD----HRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L LW SG ++ + +M L + +DK + P + IF+ IK Sbjct: 287 NGYTEVKTPVLVDKSLWEASGHWEKFRDDMFAL-ETDDKTLALKPMNCPCHVQIFKQGIK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP + L R+E G+MR R + DA+ F Sbjct: 346 SYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIF 386 >gi|20094665|ref|NP_614512.1| prolyl-tRNA synthetase [Methanopyrus kandleri AV19] gi|74580679|sp|Q8TW09|SYP_METKA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|19887826|gb|AAM02442.1| Prolyl-tRNA synthetase [Methanopyrus kandleri AV19] Length = 485 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 7/169 (4%) Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 FD+L + R +++G + G ++ T++ +G YV M YGI RVVA+ Sbjct: 223 FDTLMPD----GRTLQIGTVHMLGQNFARTFEVTYETEEGDQEYVYMTCYGISD-RVVAS 277 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +I D +G++ P VAP+++ ++ I K + + ++ L + G V DD Sbjct: 278 MIAIHGDERGLVLPPDVAPYQVVMVPILKKGVRRKILERAAEVEEMLREEGVRVKVDDRD 337 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F +L G PL++ +G++ + + + R RE + EE+ Sbjct: 338 MSPGRKFHYWELKGVPLRIELGARELEEGTAVVFRRDELERETYAFEEL 386 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 5/123 (4%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+Y WLP G + V +R + TG E+ PTL L ES + E+ Sbjct: 42 KGMYVWLPYGFEIRQRVVEKLRRKLRETGHEEVLFPTLIPETQLKKESEHIAGFEDEVYW 101 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D+ + PT E + +F I+S+ +LP +QI FR E + ++R Sbjct: 102 VTHGGLKELDEKLALRPTSETAIYPMFALWIRSHADLPLKIFQIVNTFRYETKHTRPLIR 161 Query: 152 SRE 154 RE Sbjct: 162 MRE 164 >gi|51245280|ref|YP_065164.1| threonyl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|50876317|emb|CAG36157.1| probable threonyl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 657 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 84/404 (20%), Positives = 155/404 (38%), Gaps = 45/404 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + + E R + P + DLW SG D Y M Sbjct: 280 GLPLWLPKGARMRHQIEEFWKAEHYRHDYELLYTPHIARQDLWKTSGHLDFYADSMYAGM 339 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + P + ++++ +SYR+ P + ++ +R E G+MR R F Sbjct: 340 DIDGVTYQIKPMNCPFHVGVYKAKKRSYRDFPLRWCELGTVYRYERAGALHGLMRVRSFT 399 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ F PE + + L I G + + P +G D + + Sbjct: 400 QDDAHIF-CRPEQLEDEIFNILDFNLFILKSFGFSEYDIYLSTRPEKSVGTDENWD---- 454 Query: 214 ADTGETQVFCSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 T ++ K + + I P E + I + K+ D L Sbjct: 455 KSTNALKLALEKKGLKYEIDPGEGVFYGPKIDI--------------------KIKDQLG 494 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIES 331 + + S ++ F ++ L ++ G+D +H + + +G++ V+ Sbjct: 495 RSWQCSTVQVD----FNLPERFEL----SYVGSDNSEHQPIMIHRALMGSLERFIGVLIE 546 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 H G +W +P + ++NI DQ+ + EK+YA L V D E++ + Sbjct: 547 HHAGAFPLW---FSPVQARILNI-TDDQI--EYGEKVYAELRAADIRVEKDLRNEKLNYK 600 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A L+ P +I+G K D V ++ R + M+++E + Sbjct: 601 IREAQLVKTPYMLIIGDKEKEDGTVTVRMRNGKNLDPMTVQEFV 644 >gi|193213223|ref|YP_001999176.1| prolyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] gi|259511581|sp|B3QPX3|SYP_CHLP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|193086700|gb|ACF11976.1| prolyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] Length = 481 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 73/340 (21%), Positives = 137/340 (40%), Gaps = 63/340 (18%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ I+SYR+LP Q R E+R R +R+ EFL ++ ++ P Sbjct: 108 PTSETIIWSSYKKWIQSYRDLPLLINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHADP 166 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E ++ +M Y R F + ++P +++ E++ F Sbjct: 167 EEAQEEVIRMINVY-RTFAEEYM-AMP----------------VIVGKKSESEKFAGA-- 206 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 D + ++++ A A TS HN Sbjct: 207 ------------DATYCIEAMMQDGKALQAGTS--HN----------------------- 229 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 G ++ F+ +G YV S+G+ + R++ A+I + D KG++ P +A Sbjct: 230 --LGQNFAKAFDCQFQTKEGVLDYVWATSWGV-STRLIGALIMAHSDDKGLVLPPKLASR 286 Query: 348 KISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVI 405 ++ +I I K + R I L+K G F DD G +FA +L G P+++ Sbjct: 287 QVVIIPILKGDKEEVRAHARFIAKALNKHGISTFVDDSENNSPGWKFAEYELQGIPVRIE 346 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 +G + +++ K + R T + ++ L+ + NN Sbjct: 347 LGPRDIAEGKCIVARRDTFEKTEVLLDAEMTENIEEILNN 386 >gi|165932872|ref|YP_001649661.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] gi|165907959|gb|ABY72255.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] Length = 644 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 Y L + + RD KL + H + ++G+ W G + + IR++ + Sbjct: 240 YLLMLEEAEKRD----HRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRK 295 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L LW SG ++ + +M L + +DK + P + IF+ IK Sbjct: 296 NGYTEVKTPVLVDKSLWEASGHWEKFRDDMFAL-ETDDKTLALKPMNCPCHVQIFKQGIK 354 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP + L R+E G+MR R + DA+ F Sbjct: 355 SYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIF 395 >gi|15892219|ref|NP_359933.1| threonyl-tRNA synthetase [Rickettsia conorii str. Malish 7] gi|22654126|sp|Q92IX4|SYT_RICCN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|15619354|gb|AAL02834.1| threonyl-tRNA synthetase [Rickettsia conorii str. Malish 7] Length = 635 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 Y L + + RD KL + H + ++G+ W G + + IR++ + Sbjct: 231 YLLMLEEAEKRD----HRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L LW SG ++ + +M L + +DK + P + IF+ IK Sbjct: 287 NGYTEVKTPVLVDKSLWEASGHWEKFRDDMFAL-ETDDKTLALKPMNCPCHVQIFKQGIK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP + L R+E G+MR R + DA+ F Sbjct: 346 SYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIF 386 >gi|319790149|ref|YP_004151782.1| threonyl-tRNA synthetase [Thermovibrio ammonificans HB-1] gi|317114651|gb|ADU97141.1| threonyl-tRNA synthetase [Thermovibrio ammonificans HB-1] Length = 658 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 103/460 (22%), Positives = 180/460 (39%), Gaps = 73/460 (15%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL L+E RD + +L L G+ + G+ W P G + + EE + G Sbjct: 232 FLHRLEEAKKRDHRVLGKQLDL-FGIYEEAGPGLVFWHPNGAIIRQEIEQWVEEEHRKRG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEML-----------RLADRN--------DKAMIY 106 + P + ADLW SG Y+ Y + M RL + +KA Y Sbjct: 291 YQRIYTPHIMKADLWKRSGHYNFYRENMFFVPVVEHDEEERLGNDEVPLTCSEIEKAHWY 350 Query: 107 G--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 P + I++S ++SYR+LP F++ +R E G++R R F D + F Sbjct: 351 AVKPMNCPGHILIYKSQVRSYRDLPIRFFEFGTVYRYEKSGSLHGLLRVRGFTQDDGHIF 410 Query: 164 DLTPEGSKHSYNKM---FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 P+ K + + L F + ++ R E IG + + E A + Sbjct: 411 -CRPDQLKEEIQGVMDYIMDLLSTFKLDYVINVGTRPEKF-IGTEEAWEH---ATNALIE 465 Query: 221 VFCSKDFMDFPIPSENTDF----DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + F ++ I + F DI L++I +W P +LPE Sbjct: 466 ALKERGF-EYNIVEGDGAFYGPKIDIAVLDAIGRKWDGPTIQVD--------FNLPER-- 514 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 ++ ++ G K M H MGS R + +IE Sbjct: 515 -----FDLTYVDRDGQKKRPVMV----------HRAIMGS----IERFIGLLIEHYAG-- 553 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 ++P +AP + +I + D+ D +++YA+L + G V DD ++G + A+ Sbjct: 554 --LFPTWLAPVQAVIIPVS--DKYL-DYADEVYAKLKEAGIRVKLDDESAKVGYKIRKAE 608 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 P +IVG + + V ++ + G +M L++ ++ Sbjct: 609 TQKIPYMLIVGEREKENQTVSVRSKREGDLGEMELQQFLD 648 >gi|281352894|gb|EFB28478.1| hypothetical protein PANDA_008019 [Ailuropoda melanoleuca] Length = 718 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 98/410 (23%), Positives = 155/410 (37%), Gaps = 57/410 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + + A IR E R G E+ PTL SA LW SG ++ Y + Sbjct: 314 FHELSPGSCFFLPRGTRVYNTLVAFIRAEYTRRGFSEVKTPTLFSAKLWELSGHWEHYQE 373 Query: 92 EMLRLADRNDKAMIYGPTHEEVM--TD--------------IFRSHIKSYRNLPFTFYQI 135 +M L + P+ TD +F +S+R LP Sbjct: 374 DMFTLQPPGSDRLASSPSDHPTSHPTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADF 433 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 R E G+ R R F DA+ F P+ + ++ LG S Sbjct: 434 GALHRAEASGSLGGLTRLRCFQQDDAHIF-CAPDQLEAEIRSCLDFLRSVYAVLGF-SFR 491 Query: 195 MRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 + + P G F+ GE C D + + +F + LN A Sbjct: 492 LALSTRPSG------FL-----GEP---CVWDQAEQVLQRALEEFGEPWDLNPGD---GA 534 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQ 313 Y DVH L D+L + ++ FG +Y KG G + V Sbjct: 535 FYGPKIDVH---LRDALGRPHQCGTIQLDFQLPLRFGLQY--------KGQAGVPERPVL 583 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 + +G++ + V+ S GK WP ++PF++ +I + + + ++ RL Sbjct: 584 IHRAVLGSVERMLGVLAESCGGK---WPLWLSPFQVVVIPVGTEQE---EYAREVQQRLQ 637 Query: 374 KVG--CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G CD+ D+G + + A L + Q +VG K S V I+ R Sbjct: 638 AAGLVCDLD-ADLGLTLSRRVRRAQLTHYNFQFVVGQKEQSKRTVNIRTR 686 >gi|254527233|ref|ZP_05139285.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] gi|221538657|gb|EEE41110.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] Length = 638 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 84/382 (21%), Positives = 144/382 (37%), Gaps = 42/382 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + S G+ W P G + IRE + +E+ P LW +SG ++ + Sbjct: 255 IQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSLWEKSGHWEKFRD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +M A N I P + +F +KSY++LP + R+E G+M Sbjct: 315 DMFTTASENRTYAI-KPMNCPCHIQVFNQGLKSYKDLPIRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + + ++ G I ++ + P S E Sbjct: 374 RVRNFTQDDAHIF-CTEEQIQEEVSTFIDLVFEVYKTFGFDEIIIKLSTRPEKKVGSEEI 432 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ T+ +K+ P E + I + L D Sbjct: 433 WDKSEEALTKALDNKNLKWELQPGEGAFYGPKIEFS--------------------LKDC 472 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 L N+ I+V +S+P + AT+ D K + V + +G+ Sbjct: 473 L--NRVWQCGTIQVD--------FSMPVRLDATYVDIDNEKRNPVMLHRAILGSFERFIG 522 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ ++ K IW +AP++I+L++I + + C K L G D E+ Sbjct: 523 ILIEQYEAKFPIW---LAPYQITLLSITDRNI---EKCLKFNELLINNGYRSTVDIRNEK 576 Query: 388 IGSQFAVADLLGFPLQVIVGSK 409 IG + A L PL ++G K Sbjct: 577 IGYKIREATLGRVPLIAVIGDK 598 >gi|228919324|ref|ZP_04082694.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840431|gb|EEM85702.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 502 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 62 KGCMILRPYGYALWENMQKVMDEKLKGTGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 121 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 122 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 178 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 179 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 212 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 213 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 248 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 249 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 297 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ A + KV V D + Sbjct: 298 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQAHIQKVA-RVKIDASNKTP 356 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + +V + R T +E + ++++ Sbjct: 357 GWKFNEYEMKGIPIRLEVGPKDIEKKQVVLVRRDTKEKEFVPMDQL 402 >gi|225011920|ref|ZP_03702358.1| prolyl-tRNA synthetase [Flavobacteria bacterium MS024-2A] gi|225004423|gb|EEG42395.1| prolyl-tRNA synthetase [Flavobacteria bacterium MS024-2A] Length = 492 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 88/169 (52%), Gaps = 7/169 (4%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ + A+G YV S+G+ + R++ A+I + D G++ Sbjct: 235 KALQAGTSHFLGQNFAKAFDVKYATAEGGLEYVWATSWGV-STRLIGALIMTHSDDNGLV 293 Query: 340 WPDSVAPFKISLINI----KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAV 394 P ++AP ++ +I I + ++V A EKI L + V +D+ + + G +F Sbjct: 294 LPPNLAPTQVVIIPIYRGEEEQNKVAATA-EKIKVALEEQNIRVKFDNRDKFKPGYKFND 352 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +L G PL++ +G K + + VEI R +E +S +E+++Y S + + Sbjct: 353 YELKGVPLRIAIGPKDLQNGTVEIARRDNLTKEVVSQDEIVDYISSQLA 401 Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GK ++ + ++ ++ PT E V+ + +++ I+SYR+LP Q R E+R R Sbjct: 105 GKLIVDPNAKLEEELVVRPTSEAVIWNTYKTWIQSYRDLPILINQWANVVRWEMRTRL-F 163 Query: 150 MRSREFLMKDAYSFDLT 166 +R+ EFL ++ ++ T Sbjct: 164 LRTAEFLWQEGHTAHAT 180 >gi|83814638|ref|YP_446639.1| prolyl-tRNA synthetase [Salinibacter ruber DSM 13855] gi|83756032|gb|ABC44145.1| prolyl-tRNA synthetase [Salinibacter ruber DSM 13855] Length = 527 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 5/153 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF D ++ YV S+G+ + R++ +I + D +G+ Sbjct: 269 GKALQAGTSHFLGQNFAKAFDCTFTNEDNEEEYVWATSWGV-STRLIGGLIMTHSDDQGL 327 Query: 339 IWPDSVAPFKISLINIKAHDQV---CRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAV 394 + P +AP ++ ++ + D + CE++ RL G V D Q G +F+ Sbjct: 328 VLPPKLAPHQVVIVPLFFDDDQEGPVMETCERLQERLEDHGIRVKMDQNHTQSPGWRFSE 387 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +L G PL++ +G + + + VE+ R T +E Sbjct: 388 HELRGVPLRLAIGPRDLENDNVEMARRDTQEKE 420 Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 105 IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 I PT E ++ D + I+SYR+LP + Q R E+RPR +R+ EFL ++ ++ Sbjct: 155 IVRPTSETIIWDTYSKWIQSYRDLPLLYNQWANVVRWEMRPRL-FLRTAEFLWQEGHT 211 >gi|184154400|ref|YP_001842741.1| threonyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227364219|ref|ZP_03848315.1| threonine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|325683422|ref|ZP_08162938.1| threonine--tRNA ligase [Lactobacillus reuteri MM4-1A] gi|183225744|dbj|BAG26261.1| threonyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227070764|gb|EEI09091.1| threonine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|324977772|gb|EGC14723.1| threonine--tRNA ligase [Lactobacillus reuteri MM4-1A] Length = 627 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 85/405 (20%), Positives = 163/405 (40%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I + + G + P L + D + SG ++ Y +M Sbjct: 243 GLPYWLPKGATIRRTIERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWEHYRDDMFPPM 302 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + +++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 303 DMGDGEMLELRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRYEKSGALSGLQRVREM 362 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F +T + + + K+ + ++ + R + L D Sbjct: 363 TLNDGHTF-VTLDQIRSEFAKILKLIMSVYEDFDITDYSFR--------------LSLRD 407 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M S D ++L+ E A Y D+ + +L + Sbjct: 408 PKNVKKYYANDEMWEKSQSMLKSAMDDLNLDYYEAEGEAAFYGPKLDIQTKT---ALGND 464 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F ++ L ++ G DGK+H M G +G M A + + Sbjct: 465 ETMSTIQLD----FMLPERFGL----SYVGQDGKEHQPVMIHRGVVGTMERFMAYLTEIY 516 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N +AH + D +K+ A +V D E++G + Sbjct: 517 KGAFPTW---LAPEQVHIIPVNEEAHGEYADDLAKKMKAANIRVNV----DHRNEKMGYK 569 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A P ++VG +++ V ++ + +MS E +N Sbjct: 570 IREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMSQEAFMN 614 >gi|53713725|ref|YP_099717.1| prolyl-tRNA synthetase [Bacteroides fragilis YCH46] gi|60681995|ref|YP_212139.1| prolyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|265764051|ref|ZP_06092619.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|81314941|sp|Q5LCF0|SYP_BACFN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81382377|sp|Q64TJ6|SYP_BACFR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|52216590|dbj|BAD49183.1| prolyl-tRNA synthetase [Bacteroides fragilis YCH46] gi|60493429|emb|CAH08215.1| prolyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|263256659|gb|EEZ28005.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|301163433|emb|CBW22984.1| prolyl-tRNA synthetase [Bacteroides fragilis 638R] Length = 497 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 89/166 (53%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I ARL ++G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEQLKLIDAKVEGIVARLKQLGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +E+ R T +E ++ + + Y + Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCDGIETYVQN 400 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYS 162 ++ ++ Sbjct: 173 WQEGHT 178 >gi|332798664|ref|YP_004460163.1| threonyl-tRNA synthetase [Tepidanaerobacter sp. Re1] gi|332696399|gb|AEE90856.1| threonyl-tRNA synthetase [Tepidanaerobacter sp. Re1] Length = 636 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 95/425 (22%), Positives = 164/425 (38%), Gaps = 47/425 (11%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + IH+ G + P G + + R+E ++ Sbjct: 232 EYLTRIEEAKRRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIIWNLLTDFWRKEHSKR 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + +LW SG +D Y KE + +D P + ++++ +S Sbjct: 290 GYQEIKTPIILNEELWRRSGHWDHY-KENMYFTKIDDMNYAVKPMNCPGGILMYKTDSRS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ L R EL G+MR R F DA+ F + + + + Sbjct: 349 YRDLPIRLGELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMMPSQIEDEIIG--VIDLVD 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 F+++ E+ V T S + D + D Sbjct: 407 YFYQI-----------------FGFEYNVELSTRPENSMGSDELWDQATAALQGALDKKG 449 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSA 300 I E A Y D H L DSL R + G I F ++ L Sbjct: 450 MSYKINEGDGAFYGPKIDFH---LKDSL-------GRTWQCGTIQLDFQMPERFDL---- 495 Query: 301 TFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 ++ GADG+ H V + G++ ++ + G +W +AP + ++ I Sbjct: 496 SYIGADGEKHRPVMIHRVIFGSIERFIGILIEHYAGAFPVW---LAPVQARVLPISEKHM 552 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+ +L + G V D+ E+IG + A + P +IVG K +++ V ++ Sbjct: 553 ---DYAYKVKKQLEEAGIRVEVDERNEKIGYKVRDAQMKKIPYMLIVGDKEANENTVSVR 609 Query: 420 HRLTG 424 R G Sbjct: 610 TREKG 614 >gi|257456688|ref|ZP_05621878.1| threonyl-tRNA synthetase [Treponema vincentii ATCC 35580] gi|257445881|gb|EEV20934.1| threonyl-tRNA synthetase [Treponema vincentii ATCC 35580] Length = 586 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 96/418 (22%), Positives = 171/418 (40%), Gaps = 63/418 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G W P G V +R++ G +E++ P + LW+ SG ++ Y K Sbjct: 198 IEEDNPGEVFWHPNGWTLYLTVQQHVRQKIKEDGYVEVNTPFVMPQSLWLRSGHWEKY-K 256 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + +IF+ IKSYR+LP + R+E G+M Sbjct: 257 ENMFITESEKRMFALKPMNCPGHVEIFKQGIKSYRDLPLRIAEFGSCTRNEPSGSLHGIM 316 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR-LGL--KSIPMRAESGP---IGG 204 R R F+ DA+ F T E K F + L+ +R G K+I ++ + P +G Sbjct: 317 RVRGFVQDDAHIF-CTEEQISSEVCK-FCNLLKSLYRDFGFDDKAILVKFSTRPEKRVGD 374 Query: 205 DLSHEFIVLADTGETQV--FCSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSD 261 D + D E + C +++ I P E + + Sbjct: 375 DATW------DRAENALAEACKAAGLEYEIAPGEGAFYGPKLEFT--------------- 413 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP----MSATFKGADGKDHY-VQMGS 316 L D+L R + G I Y LP ++A + G D + H V + Sbjct: 414 -----LVDAL-------GREWQCGTI---QADYQLPSKDRLNAEYIGEDNQKHQPVMLHR 458 Query: 317 YGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 +G++ R + +IE G P ++P + +I + V + E+I + L+K Sbjct: 459 AALGSLERFIGILIEQF----GGALPPWLSPVQAMVIPVAP---VFNEYAEQIASVLTKA 511 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G V D +++ ++ P Q++VG K + V ++ L G ++ MS++E Sbjct: 512 GFRVKADIDTDRMNAKIRKYQEQKIPYQLVVGEKEKQSNSVTVR-LLKGEQKTMSVDE 568 >gi|229176981|ref|ZP_04304376.1| Prolyl-tRNA synthetase 2 [Bacillus cereus 172560W] gi|229188661|ref|ZP_04315700.1| Prolyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876] gi|228594850|gb|EEK52630.1| Prolyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876] gi|228606456|gb|EEK63882.1| Prolyl-tRNA synthetase 2 [Bacillus cereus 172560W] Length = 476 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ A + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQAHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E + ++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQL 376 >gi|86143057|ref|ZP_01061479.1| threonyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] gi|85830502|gb|EAQ48961.1| threonyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] Length = 648 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 82/389 (21%), Positives = 153/389 (39%), Gaps = 39/389 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 +G+ WLP G + + ++ Q + G + P + +L+V SG Y YG++ + Sbjct: 261 QGLPLWLPKGAALRERLENFLKAAQKKAGYEMVVSPHIGQKELYVTSGHYAKYGEDSFQP 320 Query: 96 -LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + + P + +IF + SYR+LP F + +R E G+ R R Sbjct: 321 ITTPAEGEEFLLKPMNCPHHCEIFNATQWSYRDLPKRFAEFGTVYRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TP+ + K+ L +F LG ++ + + L Sbjct: 381 GFTQDDAHIF-CTPDQLDDEFMKVIDLVLYVFGSLGFENFTAQ--------------VSL 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D + + LN +VE A + + KL D + Sbjct: 426 RDPENKEKYIGTDENWAKAENAIINAAKAKGLNYVVETGEAAF------YGPKL-DFMV- 477 Query: 274 NKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIE 330 K R ++G I Y+LP +KG+D ++H V + G+M A++ Sbjct: 478 -KDALGRSWQLGTI---QVDYNLPERFELAYKGSDNEEHRPVMIHRAPFGSMERFVAILL 533 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 G +W + P + +++ + + + + + L DD GE +G Sbjct: 534 EHTGGNFPLW---LMPEQATVLTLSEN---YENYAQNVLTLLENHDVRATIDDRGETMGR 587 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + A++ P +I+G K +D V ++ Sbjct: 588 KIREAEMQKTPYMLIIGEKEANDGTVSVR 616 >gi|49479045|ref|YP_034723.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|81397340|sp|Q6HNZ7|SYP2_BACHK RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA ligase 2; Short=ProRS 2 gi|49330601|gb|AAT61247.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 476 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|301767961|ref|XP_002919352.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Ailuropoda melanoleuca] Length = 718 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 98/410 (23%), Positives = 155/410 (37%), Gaps = 57/410 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + + A IR E R G E+ PTL SA LW SG ++ Y + Sbjct: 314 FHELSPGSCFFLPRGTRVYNTLVAFIRAEYTRRGFSEVKTPTLFSAKLWELSGHWEHYQE 373 Query: 92 EMLRLADRNDKAMIYGPTHEEVM--TD--------------IFRSHIKSYRNLPFTFYQI 135 +M L + P+ TD +F +S+R LP Sbjct: 374 DMFTLQPPGSDRLASSPSDHPTSHPTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADF 433 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 R E G+ R R F DA+ F P+ + ++ LG S Sbjct: 434 GALHRAEASGSLGGLTRLRCFQQDDAHIF-CAPDQLEAEIRSCLDFLRSVYAVLGF-SFR 491 Query: 195 MRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 + + P G F+ GE C D + + +F + LN A Sbjct: 492 LALSTRPSG------FL-----GEP---CVWDQAEQVLQRALEEFGEPWDLNPGD---GA 534 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQ 313 Y DVH L D+L + ++ FG +Y KG G + V Sbjct: 535 FYGPKIDVH---LRDALGRPHQCGTIQLDFQLPLRFGLQY--------KGQAGVPERPVL 583 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 + +G++ + V+ S GK WP ++PF++ +I + + + ++ RL Sbjct: 584 IHRAVLGSVERMLGVLAESCGGK---WPLWLSPFQVVVIPVGTEQE---EYAREVQQRLQ 637 Query: 374 KVG--CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G CD+ D+G + + A L + Q +VG K S V I+ R Sbjct: 638 AAGLVCDLD-ADLGLTLSRRVRRAQLTHYNFQFVVGQKEQSKRTVNIRTR 686 >gi|312128091|ref|YP_003992965.1| threonyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311778110|gb|ADQ07596.1| threonyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 639 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 95/398 (23%), Positives = 154/398 (38%), Gaps = 45/398 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G +LP G + + REE + G E+ P + + DLWV+SG +D Y K Sbjct: 258 IFEEGPGFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIMLTKDLWVQSGHWDHY-K 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D+ P + +++ SYR LP ++ L R EL G+M Sbjct: 317 ENMYFTKIDDQEFAIKPMNCPGSILVYKRKSHSYRELPERLCELGLVHRHELSGVLHGLM 376 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLS 207 R R F DA+ F + P K + + G K + R E +G D Sbjct: 377 RVRCFTQDDAHIF-MLPSQIKDEIKGVIDLIDYFYSVFGFKYHVELSTRPEIS-MGTD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E +A+T + + +D+ I + F Y D H E Sbjct: 433 -EQWNMAETALKEAL-EEVGIDYKINEGDGAF----------------YGPKIDFHLE-- 472 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVA 326 DSL + + ++ F ++ L + G DG H V + G++ Sbjct: 473 -DSLKRTWQCATIQLD----FQMPERFDL----YYIGEDGAKHRPVMLHRVVFGSIERFI 523 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++ G +W +AP +I +I + + D KI L + G V D E Sbjct: 524 AILTEHFAGAFPVW---LAPTQIRVIPVSDN---FNDYAAKISQTLKENGFRVEEDYRSE 577 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +G + A L P VIVG K ++ + ++ R G Sbjct: 578 TVGYKIRDAQLQKIPYMVIVGEKERRENTIAVRDRKKG 615 >gi|225568704|ref|ZP_03777729.1| hypothetical protein CLOHYLEM_04783 [Clostridium hylemonae DSM 15053] gi|225162203|gb|EEG74822.1| hypothetical protein CLOHYLEM_04783 [Clostridium hylemonae DSM 15053] Length = 583 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 93/410 (22%), Positives = 163/410 (39%), Gaps = 53/410 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I G +LP G + + R+ R G +E+S P + S LW SG +D Y Sbjct: 208 IMDEGPGFPFFLPKGMVLKNLLIDYWRQLHLREGYVEISTPIILSRHLWENSGHWDHYKD 267 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + D D A+ P + +++ +SY++LP ++ L R E + G+ Sbjct: 268 NMYTTVIDEEDYAV--KPMNCPGGMLVYKVEPRSYKDLPMRVGELGLVHRHEKSGQLHGL 325 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 MR R F DA+ F +T + + + ++ + G K + R E+ +G D Sbjct: 326 MRVRCFTQDDAHIF-MTEDQIRDEIKGVARLIDEVYSKFGFKYHVELSTRPENS-MGSDA 383 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E G + MD+ + + F Y D H E Sbjct: 384 DWEMATEGLRGALEELG----MDYVVNEGDGAF----------------YGPKIDFHLE- 422 Query: 267 LFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM 322 DS+ R + G I F ++ L + GADG+ H + + G++ Sbjct: 423 --DSI-------GRTWQCGTIQLDFQMPQRFEL----EYTGADGEKHRPIMIHRVAFGSI 469 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ + GK +P +AP ++ ++ + D+ D +K+ L G V D Sbjct: 470 ERFIGILIEHYAGK---FPTWLAPVQVKILPVS--DKFA-DYAQKVTDELKAAGIRVELD 523 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 E++G + A + P +IVG K V+++ V ++ R G M L+ Sbjct: 524 GRSEKLGYKIREAQMQKVPYMIIVGEKEVAENVVSVRKRDEGDIGSMELK 573 >gi|47567221|ref|ZP_00237935.1| prolyl-tRNA synthetase [Bacillus cereus G9241] gi|206974268|ref|ZP_03235185.1| prolyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217957991|ref|YP_002336535.1| prolyl-tRNA synthetase [Bacillus cereus AH187] gi|229137257|ref|ZP_04265874.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26] gi|47556064|gb|EAL14401.1| prolyl-tRNA synthetase [Bacillus cereus G9241] gi|206747508|gb|EDZ58898.1| prolyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217066763|gb|ACJ81013.1| prolyl-tRNA synthetase [Bacillus cereus AH187] gi|228646252|gb|EEL02469.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26] Length = 476 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E ++++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMDQL 376 >gi|93007241|ref|YP_581678.1| threonyl-tRNA synthetase [Psychrobacter cryohalolentis K5] gi|123264359|sp|Q1Q809|SYT_PSYCK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|92394919|gb|ABE76194.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Psychrobacter cryohalolentis K5] Length = 644 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 93/423 (21%), Positives = 155/423 (36%), Gaps = 70/423 (16%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q+ G E+ P + LW SG + +Y Sbjct: 255 MQEQAPGMVFWHANGWTIYQVLEQYMRKVQHDNGYEEIKTPQIVDRSLWERSGHWGNYAT 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTSSENRDYAV-KPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + L ++ G I M+ + P +G D S Sbjct: 374 RVRGFTQDDAHIF-CTQSQIQQEVADFIKLTLAVYEDFGFDKIIMKLSTRPEKRVGSDES 432 Query: 208 HEFI--VLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 +F LAD ++ +D+ +P E + I + Sbjct: 433 WDFAEKALADALDSS------GLDWAYLPGEGAFYGPKIEFS------------------ 468 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP-----MSATFKGADGKD------HYVQ 313 L DSL G ++ GT P + A F + H Sbjct: 469 --LKDSL-------------GRVWQCGTIQVDPNMPERLDAEFVNEQNEREVPIMLHRAI 513 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 +GS+ R + +IE ++ G +W +AP ++ ++NI DACE + L Sbjct: 514 LGSF----ERFIGILIE-NYAGWMPVW---LAPQQVVVMNITDKQA---DACENVVNELK 562 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 K G D E+IG + L P +++G K V + ++ R MS+ E Sbjct: 563 KAGLRAISDLRNEKIGFKIREKTLERIPYMLVLGDKEVESGSINVRTREGENLGVMSVAE 622 Query: 434 VIN 436 I Sbjct: 623 FIT 625 >gi|303237443|ref|ZP_07324009.1| proline--tRNA ligase [Prevotella disiens FB035-09AN] gi|302482393|gb|EFL45422.1| proline--tRNA ligase [Prevotella disiens FB035-09AN] Length = 493 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 95/196 (48%), Gaps = 10/196 (5%) Query: 249 VEQWTA-PYAATSDVHNEKLFDSLP----ENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 EQW A P NE+ +L E + ++ G + G ++ TF Sbjct: 201 AEQWLAIPVVQGVKSENERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAKSFDVTFL 260 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVC- 361 + K YV S+G+ + R+V A+I + D G++ P +AP ++ ++ I K +Q+ Sbjct: 261 NKENKPEYVWATSWGV-STRLVGALIMTHSDDNGLVLPPKIAPIQVVIVPIFKGAEQLAA 319 Query: 362 -RDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + + L G V +D+ ++ G +FA +L G P+++ +G + + ++ +EI Sbjct: 320 ITEKLQPVINELRAKGISVKFDNADNKRPGFKFAEYELKGVPVRLAMGGRDLENNTIEIM 379 Query: 420 HRLTGIREDMSLEEVI 435 R T +E++S + ++ Sbjct: 380 RRDTLEKENVSFDGIV 395 >gi|88800311|ref|ZP_01115877.1| threonyl-tRNA synthetase [Reinekea sp. MED297] gi|88776888|gb|EAR08097.1| threonyl-tRNA synthetase [Reinekea sp. MED297] Length = 643 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 10/180 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R +Q++ G E+ P + LW +SG +D +G Sbjct: 256 LQEDAPGMVFWHPNGWTMYQVIEQYMRRKQHQHGYQEIKTPMVVDRSLWEKSGHWDKFGD 315 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +M ++ D A+ P + +F +KSYR+LP + R+E G+ Sbjct: 316 DMFTTHSESRDNAI--KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEASGALHGI 373 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGD 205 MR R F+ DA+ F EG S F+ L ++H G ++ + P +G D Sbjct: 374 MRVRGFVQDDAHIF--CTEGQIQSEVASFIGMLEEVYHDFGFDDYILKLSTRPEQRVGSD 431 >gi|228983651|ref|ZP_04143854.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228776089|gb|EEM24452.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 476 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/406 (19%), Positives = 158/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E ++++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMDQL 376 >gi|254373138|ref|ZP_04988627.1| threonine-tRNA ligase [Francisella tularensis subsp. novicida GA99-3549] gi|151570865|gb|EDN36519.1| threonine-tRNA ligase [Francisella novicida GA99-3549] Length = 634 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/382 (20%), Positives = 146/382 (38%), Gaps = 48/382 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S GI W G + V +R N+ G E+ P + LW +SG Y + Sbjct: 255 QEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSGHASKYAEN 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N I P + ++ + + SYR+LP + + R+E G++R Sbjct: 315 MFATKSENRDFAIR-PMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLR 373 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F TPE + M ++ G ++ P IG D + Sbjct: 374 VRSFTQDDGHIF-CTPEQVEEEVILMVQQCFEVYKDFGFNDFAVKIALRPENRIGDDETW 432 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + S+ + + + N ++ ++ A Y + H L Sbjct: 433 DK-------------SEQMLKNALDANNVSYE-------LLPGEGAFYGPKIEFH---LK 469 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 D++ R + G I +S+P + AT+ +G+ V + +G++ Sbjct: 470 DAI-------GRSWQCGTI---QLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP +++++ I + D C++++ L K G D Sbjct: 520 IGMLIEHYAGNLPLW---LAPVQVAVMGISNNQD---DYCKEVFTMLEKNGIRAKLDLRN 573 Query: 386 EQIGSQFAVADLLGFPLQVIVG 407 E+IG + LL P VI+G Sbjct: 574 EKIGFKIREHTLLRVPYLVILG 595 >gi|332678497|gb|AEE87626.1| Threonyl-tRNA synthetase [Francisella cf. novicida Fx1] Length = 634 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/382 (20%), Positives = 146/382 (38%), Gaps = 48/382 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S GI W G + V +R N+ G E+ P + LW +SG Y + Sbjct: 255 QEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSGHASKYAEN 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N I P + ++ + + SYR+LP + + R+E G++R Sbjct: 315 MFATKSENRDFAIR-PMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLR 373 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F TPE + M ++ G ++ P IG D + Sbjct: 374 VRSFTQDDGHIF-CTPEQVEEEVILMVQQCFEVYKDFGFNDFAVKIALRPENRIGDDETW 432 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + S+ + + + N ++ ++ A Y + H L Sbjct: 433 DK-------------SEQMLKNALDANNVSYE-------LLPGEGAFYGPKIEFH---LK 469 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 D++ R + G I +S+P + AT+ +G+ V + +G++ Sbjct: 470 DAI-------GRSWQCGTI---QLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP +++++ I + D C++++ L K G D Sbjct: 520 IGMLIEHYAGNLPLW---LAPVQVAVMGISNNQD---DYCKEVFTMLEKNGIRAKLDLRN 573 Query: 386 EQIGSQFAVADLLGFPLQVIVG 407 E+IG + LL P VI+G Sbjct: 574 EKIGFKIREHTLLRVPYLVILG 595 >gi|281425750|ref|ZP_06256663.1| proline--tRNA ligase [Prevotella oris F0302] gi|281400158|gb|EFB30989.1| proline--tRNA ligase [Prevotella oris F0302] Length = 493 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 86/161 (53%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF + K YV S+G+ + R++ A+I D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGV-STRLMGALIMVHSDDNGL 294 Query: 339 IWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I K DQ+ + + + +L ++G V +DD ++ G +FA Sbjct: 295 VLPPKLAPIQVVIVPIYKGDDQLKAISNKLQPVINKLEELGISVKYDDSDNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++++G + + ++ +EI R T +E +S + ++ Sbjct: 355 YELKGIPVRLVMGGRDLENNTIEIMRRDTLEKESVSFDGIV 395 >gi|329928815|ref|ZP_08282654.1| threonine--tRNA ligase [Paenibacillus sp. HGF5] gi|328937458|gb|EGG33879.1| threonine--tRNA ligase [Paenibacillus sp. HGF5] Length = 645 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 83/409 (20%), Positives = 167/409 (40%), Gaps = 47/409 (11%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ WLP G K + I + + R G + P L + +L+ SG ++ Y ++M Sbjct: 263 GQGLPIWLPNGAKLRRTLERYIVDMEERLGYQHVYTPVLGNVELYKTSGHWEHYQEDMFP 322 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + +++ ++ P + +++S + SYR+LP ++ ++ R E+ G+ R R Sbjct: 323 KMEMDNEELVLRPMNCPHHMMVYKSDMHSYRDLPIRIAELGMQHRYEMSGALTGLHRVRA 382 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + D++ F P+ K + ++ + ++ G+ R LS+ Sbjct: 383 MTLNDSHIF-CRPDQIKEEFARVIQLIMTVYKDFGIHDYRFR---------LSYR----- 427 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP-YAATSDVH------NEKL 267 D +T+ + D M + + L +VE P Y A + + ++ Sbjct: 428 DPQDTEKYFQNDEM-WEMSQR--------MLREVVESLDMPFYEAEGEAAFYGPKLDVQI 478 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVA 326 +L + + +S ++ F ++ L + G DG+ H + GI G M Sbjct: 479 RTALGKEETLSTVQLD----FLLPERFEL----EYVGDDGQKHRPVVIHRGILGTMERFT 530 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A + + G +W ++P ++ +I + D +++ +L G V D E Sbjct: 531 AFLLENFAGALPLW---LSPVQVKVIPV---SNAFEDYAKEVAEKLQFAGISVEPDLRNE 584 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++G + A L P IVG S V ++ R G L+E+I Sbjct: 585 KLGYKIREAQLEKIPYMFIVGENEKSAGAVSVRKRGEGDIGAQPLDEII 633 >gi|224025842|ref|ZP_03644208.1| hypothetical protein BACCOPRO_02584 [Bacteroides coprophilus DSM 18228] gi|224019078|gb|EEF77076.1| hypothetical protein BACCOPRO_02584 [Bacteroides coprophilus DSM 18228] Length = 521 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 89/166 (53%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ + F + K YV S+G+ + R++ A+I + D G+ Sbjct: 261 GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDYVWATSWGV-STRLMGALIMTHSDDNGL 319 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I A+L ++G V +D+ ++ G +FA Sbjct: 320 VLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLRELGISVKYDNADNKRPGFKFAD 379 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +EI R T +E + E + Y + Sbjct: 380 YELKGVPVRLVMGGRDLENNTMEIMRRDTLEKETRTCEGIEEYVKN 425 Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ +++ I SYR+LP Q R E+R R +R+ EFL Sbjct: 139 AAKLEEELIIRPTSETIIWSTYKNWINSYRDLPILCNQWANVMRWEMRTRL-FLRTAEFL 197 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSY 181 ++ ++ T E ++ KM Y Sbjct: 198 WQEGHTAHATREEAETEAQKMLHVY 222 >gi|157413014|ref|YP_001483880.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] gi|166987324|sp|A8G3W3|SYT_PROM2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157387589|gb|ABV50294.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] Length = 638 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 83/382 (21%), Positives = 144/382 (37%), Gaps = 42/382 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + S G+ W P G + IRE + +E+ P LW +SG ++ + Sbjct: 255 IQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSLWEKSGHWEKFRD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +M A N I P + +F +KSY++LP + R+E G+M Sbjct: 315 DMFTTASENRTYAI-KPMNCPCHIQVFNQGLKSYKDLPIRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + + ++ G I ++ + P S E Sbjct: 374 RVRNFTQDDAHIF-CTEEQIQEEVSTFIDLVFEVYKTFGFDEIIIKLSTRPKKKVGSEEI 432 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ T+ +K+ P E + I + L D Sbjct: 433 WDKSEEALTKALDNKNLKWELQPGEGAFYGPKIEFS--------------------LKDC 472 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 L N+ I+V +S+P + AT+ D K + V + +G+ Sbjct: 473 L--NRVWQCGTIQVD--------FSMPIRLDATYVDIDNEKRNPVMLHRAILGSFERFIG 522 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ ++ K IW +AP++++L++I + + C K L G D E+ Sbjct: 523 ILIEQYEAKFPIW---LAPYQLTLLSITDRNI---EKCLKFNELLINNGYRSTVDIRNEK 576 Query: 388 IGSQFAVADLLGFPLQVIVGSK 409 IG + A L PL ++G K Sbjct: 577 IGYKIREATLERVPLIAVIGDK 598 >gi|254374591|ref|ZP_04990072.1| threonyl-tRNA synthetase [Francisella novicida GA99-3548] gi|151572310|gb|EDN37964.1| threonyl-tRNA synthetase [Francisella novicida GA99-3548] Length = 634 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 160/418 (38%), Gaps = 59/418 (14%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S GI W G + V +R N+ G E+ P + LW +SG Y + Sbjct: 255 QEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSGHASKYAEN 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N I P + ++ + + SYR+LP + + R+E G++R Sbjct: 315 MFATKSENRDFAIR-PMNCPTCVQVYNTKLHSYRDLPIRIAEFGIVHRNEPSGSLHGLLR 373 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F TPE + M ++ G ++ P IG D + Sbjct: 374 VRSFTQDDGHIF-CTPEQVEEEVILMVQQCFEVYKDFGFNDFAVKIALRPENRIGDDETW 432 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + S+ + + + N ++ ++ A Y + H L Sbjct: 433 DK-------------SEQMLKNALDANNVSYE-------LLPGEGAFYGPKIEFH---LK 469 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 D++ R + G I +S+P + AT+ +G+ V + +G++ Sbjct: 470 DAI-------GRSWQCGTI---QLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP +++++ I + D C++++ L K G D Sbjct: 520 IGMLIEHYAGNLPLW---LAPVQVAVMGISNNQD---DYCKEVFTMLEKNGIRAKLDLRN 573 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR----EDMSLEEVINYAS 439 E+IG + LL P VI+G K E + ++ IR ED+ V ++ + Sbjct: 574 EKIGFKIREHTLLRVPYLVILG-------KNEQEQKIITIRKHSGEDLGQMSVYDFCA 624 >gi|146307004|ref|YP_001187469.1| threonyl-tRNA synthetase [Pseudomonas mendocina ymp] gi|166225482|sp|A4XTS1|SYT_PSEMY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145575205|gb|ABP84737.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Pseudomonas mendocina ymp] Length = 640 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 3/171 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW SG + +Y + Sbjct: 255 LQEEAPGMVFWHPNGWTVYQVLEQYMRQVQRENGYVEVRTPQVVDRILWERSGHWSNYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M A N + P + IF +KSYR+LP + R+E G+M Sbjct: 315 NMFTTASENRDYAV-KPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 R R F+ DA+ F T + K L+++ G I M+ + P Sbjct: 374 RVRGFVQDDAHIF-CTEDQVKKEAADFIKLTLQVYADFGFTDIAMKLSTRP 423 >gi|332968643|gb|EGK07696.1| threonine--tRNA ligase [Psychrobacter sp. 1501(2011)] Length = 644 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 86/405 (21%), Positives = 151/405 (37%), Gaps = 64/405 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G + +R+ Q G E+ P + LW +SG + +Y Sbjct: 255 MQEQSPGMVFWHPNGWTIYQVLEQYMRKVQKDNGYQEIKTPQIVDRSLWEKSGHWGNYAT 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + + P + +F +KSYR LP + R+E G+M Sbjct: 315 NMFTTSSESRDYAV-KPMNCPCHVQVFNQGLKSYRELPIRLAEFGSCHRNEPSGSLHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + N + ++ L ++ G I M+ + P +G D S Sbjct: 374 RVRGFTQDDAHIFCTQAQIQEEVANFIKLT-LDVYKDFGFDQIDMKLSTRPEKRVGTDES 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + +A+ + S +P E + I + L Sbjct: 433 WD---IAEKALAEALDSSGLEWEYLPGEGAFYGPKIEFS--------------------L 469 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP-----MSATFKGADGKD------HYVQMGS 316 DSL G ++ GT P + A F + + H +GS Sbjct: 470 KDSL-------------GRVWQCGTIQVDPNMPERLDAEFVNENNERETPIMLHRAILGS 516 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 + R + +IE + G +W +AP ++ ++NI +AC+ + A L G Sbjct: 517 FE----RFLGMLIE-HYAGWMPVW---LAPQQVVVMNITDKQS---EACQNVVAELQNAG 565 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + L P +++G K V +V ++ R Sbjct: 566 LRAISDLRNEKIGFKIRERTLERIPYMLVLGDKEVESGQVNVRTR 610 >gi|288801976|ref|ZP_06407417.1| proline--tRNA ligase [Prevotella melaninogenica D18] gi|302347070|ref|YP_003815368.1| proline--tRNA ligase [Prevotella melaninogenica ATCC 25845] gi|288335411|gb|EFC73845.1| proline--tRNA ligase [Prevotella melaninogenica D18] gi|302151118|gb|ADK97379.1| proline--tRNA ligase [Prevotella melaninogenica ATCC 25845] Length = 493 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 85/161 (52%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGV-STRLIGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I K +Q+ D + + +L +G V +DD ++ G +FA Sbjct: 295 VLPPKIAPIQVVIVPIFKGEEQLKALTDKLQPVIDQLRALGITVKYDDADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++ +G + + ++ +E+ R T +E +S + ++ Sbjct: 355 YELKGVPVRLAMGGRDLENNTIEVMRRDTLEKESVSFDGIV 395 >gi|241889888|ref|ZP_04777186.1| threonyl-tRNA synthetase [Gemella haemolysans ATCC 10379] gi|241863510|gb|EER67894.1| threonyl-tRNA synthetase [Gemella haemolysans ATCC 10379] Length = 647 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 86/386 (22%), Positives = 159/386 (41%), Gaps = 36/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + S DL++ SG ++ Y ++M Sbjct: 262 GLPLWLPNGATIRRTIERYIVDKEVELGYDHVYTPIMGSKDLYITSGHWEHYQEDMFPPM 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + + M+ P + ++++ SYR LP ++ + R E G+ R R Sbjct: 322 EMDHETMVLRPMNCPHHMMVYKNERHSYRELPIRIAELGMMHRYEASGAVSGLQRVRGMT 381 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 + DA+ F + P+ K + + LG+K+ R LS+ D Sbjct: 382 LNDAHIF-VRPDQLKDEFKLTVGLIEEAYKDLGIKNFSYR---------LSYR-----DP 426 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENK 275 T+ + D M + D + L+ + E A Y DV E K Sbjct: 427 ENTEKYFDDDAMWNNAQQMLKETADELGLDYVEAEGEAAFYGPKLDVQVETAI-----GK 481 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSH 333 + + I++ F ++ L + G DGK H + GI + R+VA ++E Sbjct: 482 QETLSTIQLD--FLLPERFEL----EYIGEDGKAHRPVVIHRGIVSTMERMVAFLLEEY- 534 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 KG + P ++P ++ +I + ++ D ++I L K G V DD E++G + Sbjct: 535 --KGDL-PTWLSPNQVRIIPV--NNDYHYDYSKEIMQELKKAGVKVAIDDRDEKLGYKIR 589 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P +++G K V + V ++ Sbjct: 590 EAASKKIPYTLVIGDKEVENRNVNVR 615 >gi|77409694|ref|ZP_00786359.1| prolyl-tRNA synthetase [Streptococcus agalactiae COH1] gi|77171692|gb|EAO74896.1| prolyl-tRNA synthetase [Streptococcus agalactiae COH1] Length = 69 Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 26/60 (43%), Positives = 41/60 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKXKTIMRQE 60 >gi|294645076|ref|ZP_06722802.1| proline--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|292639582|gb|EFF57874.1| proline--tRNA ligase [Bacteroides ovatus SD CC 2a] Length = 447 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 88/166 (53%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 186 GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGV-STRLMGALIMTHSDDNGL 244 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I A+L +G V +D+ ++ G +FA Sbjct: 245 VLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPGFKFAD 304 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +E+ R T +E ++ E + Y + Sbjct: 305 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCEGIETYVQN 350 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q FR E+R R +R+ EFL Sbjct: 64 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 122 Query: 157 MKDAYS 162 ++ ++ Sbjct: 123 WQEGHT 128 >gi|118497781|ref|YP_898831.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida U112] gi|194323753|ref|ZP_03057529.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|208779844|ref|ZP_03247188.1| threonyl-tRNA synthetase [Francisella novicida FTG] gi|166223342|sp|A0Q762|SYT_FRATN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118423687|gb|ABK90077.1| threonyl-tRNA synthetase [Francisella novicida U112] gi|194322117|gb|EDX19599.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|208744299|gb|EDZ90599.1| threonyl-tRNA synthetase [Francisella novicida FTG] Length = 634 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/382 (20%), Positives = 146/382 (38%), Gaps = 48/382 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S GI W G + V +R N+ G E+ P + LW +SG Y + Sbjct: 255 QEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSGHASKYAEN 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N I P + ++ + + SYR+LP + + R+E G++R Sbjct: 315 MFATKSENRDFAIR-PMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLR 373 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F TPE + M ++ G ++ P IG D + Sbjct: 374 VRSFTQDDGHIF-CTPEQVEEEVILMVQQCFEVYKDFGFNDFAVKIALRPENRIGDDETW 432 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + S+ + + + N ++ ++ A Y + H L Sbjct: 433 DK-------------SEQMLKNALDANNVSYE-------LLPGEGAFYGPKIEFH---LK 469 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 D++ R + G I +S+P + AT+ +G+ V + +G++ Sbjct: 470 DAI-------GRSWQCGTI---QLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP +++++ I + D C++++ L K G D Sbjct: 520 IGMLIEHYAGNLPLW---LAPVQVAVMGISNNQD---DYCKEVFTMLEKNGIRAKLDLRN 573 Query: 386 EQIGSQFAVADLLGFPLQVIVG 407 E+IG + LL P VI+G Sbjct: 574 EKIGFKIREHTLLRVPYLVILG 595 >gi|303230749|ref|ZP_07317496.1| threonine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] gi|302514509|gb|EFL56504.1| threonine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] Length = 636 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 91/396 (22%), Positives = 157/396 (39%), Gaps = 49/396 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +I + G +LP G + + RE + E+ P + + LW SG +D Y Sbjct: 256 VIKEEGPGFPFFLPKGMALRNELENFWREVHHDFEYDEIRTPIILNKHLWETSGHWDHY- 314 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +E + +D+ P + ++++ + SYR+LP + ++ L R EL G+ Sbjct: 315 RENMYTTIIDDEEYAIKPMNCPGGILVYQNEMHSYRDLPLRYAELGLVHRHELSGALHGL 374 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSH 208 R R F DA+ F + PE + K+ + RI+ + GLK + + + GD Sbjct: 375 FRVRAFTQDDAHVF-MLPEQMQSELMKVIELFDRIYSQFGLKYHVELSTKPDNAMGD--- 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + I A T + +D+ I + F Y D H E Sbjct: 431 DAIWEAATEALRNAIEAKGIDYVINPGDGAF----------------YGPKLDYHIE--- 471 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDH-YVQMGSYGIGAMRVV 325 DSL R + G I +LP + + G DG+ H + + G+M Sbjct: 472 DSL-------GRTWQCGTI---QLDMNLPERFNVEYIGEDGQKHRTIMIHRACFGSMERF 521 Query: 326 AAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G W P V IS ++K +Q+ + R V +V DD Sbjct: 522 IGILTEHYAGAFPTWMAPVQVKVLPISEKHVKYANQLAKQ------MRHDYVRVEV--DD 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E+IG + A + P ++VG K + D+ V ++ Sbjct: 574 RNEKIGYKIRQAQMEKVPYMLVVGDKEMEDNSVNVR 609 >gi|325287305|ref|YP_004263095.1| threonyl-tRNA synthetase [Cellulophaga lytica DSM 7489] gi|324322759|gb|ADY30224.1| threonyl-tRNA synthetase [Cellulophaga lytica DSM 7489] Length = 647 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/401 (19%), Positives = 145/401 (36%), Gaps = 65/401 (16%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-- 95 G+ WLP G + + +++ Q + G + P + +L+V SG Y YG++ + Sbjct: 263 GLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTPHIGQKELYVTSGHYAKYGEDSFQPI 322 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + D+ + P + ++F SY++LP F + +R E G+ R R Sbjct: 323 KTPKMDEEFLLKPMNCPHHCEVFNFKPHSYKDLPKRFAEFGTVYRYEQSGELHGLTRVRG 382 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F TP+ + + L + + LG Sbjct: 383 FTQDDAHIF-CTPDQLDQEFKNVIDLSLYVLNSLG------------------------- 416 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 F +F D ++ VE W A + EK D + E+ Sbjct: 417 ------------FTNFKAQVSVRDLNNPDKYIGSVENWEKAENAIINAAKEKGLDYVIES 464 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 + G + +G + GT Y+LP T+KG+D +DH V + G Sbjct: 465 GEAAFYGPKLDFMVKDALGRNWQLGTIQVDYNLPERFDLTYKGSDNEDHRPVMIHRAPFG 524 Query: 321 AMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +M A++ G +W PD +S + +K+ L Sbjct: 525 SMERFIALLLEHTGGNFPLWLIPDQAIVLPVS--------EKYEKYAKKVLNSLENDEIR 576 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E +G + A++ P +I+G + + + ++ Sbjct: 577 ALLDNRNETVGKKIREAEMNKIPFMIIIGENEEATNTISVR 617 >gi|332187352|ref|ZP_08389090.1| threonyl-tRNA synthetase [Sphingomonas sp. S17] gi|332012513|gb|EGI54580.1| threonyl-tRNA synthetase [Sphingomonas sp. S17] Length = 664 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 94/430 (21%), Positives = 165/430 (38%), Gaps = 68/430 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G W P G + + A +R + TG E+ P + A W +SG + Y + Sbjct: 263 LQQEAHGSVFWHPKGYRIWRELEAYMRRAIDATGYREVKTPQVMDARQWEQSGHWGKYRE 322 Query: 92 EMLRLADR-------------NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 M + D + + M P + IFR IKSYR+LP FY+ Sbjct: 323 NMFVIPDEVPNTEDEGPLVSDDAQWMALKPMNCPAHVLIFRQGIKSYRDLPLRFYENGCC 382 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 R+E G+MR R+F DA+ F V +R F L + Sbjct: 383 HRNEPHGALHGLMRVRQFTQDDAHIF---------CREDQIVEEVRAFCELADR------ 427 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 I D + + + F +++ D +E + +++ EQ+ Sbjct: 428 ----IYKDFGFTYSIKLALRPEKRFGTEEMWD---QAEEELRNAVVAAGLATEQYG---- 476 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIE------VGHIFYFGTKYS---LP--MSATFKGAD 306 ++ LP A +E +G + GT S LP + A++ G D Sbjct: 477 ----------WEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYIGED 526 Query: 307 GKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 G+ H M I G+ ++ + G+ +W +AP + + I + Sbjct: 527 GERHRPIMLHRAIFGSYERFIGILIEHYAGRFPVW---LAPVQAVVATIVSD---ADGYA 580 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 E+ A+L+ G V D E+I + + P+ ++VG + + KV ++ + Sbjct: 581 EEAAAKLAAAGIRVETDLRNEKINYKVREHSVAKVPVLLVVGKREAEEGKVAVRRLGSQA 640 Query: 426 REDMSLEEVI 435 +E M+L+E I Sbjct: 641 QEVMTLDEAI 650 >gi|298373605|ref|ZP_06983594.1| threonine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] gi|298274657|gb|EFI16209.1| threonine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] Length = 650 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 92/417 (22%), Positives = 162/417 (38%), Gaps = 67/417 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + +++ Q R G ++ P + + L+V SG + YGK+ + Sbjct: 265 KGLPLWLPKGTDLRLRLENFLKKLQKRYGYQQVITPHIGAKQLYVTSGHWAKYGKDSFQP 324 Query: 97 ADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ Y P + +I++S KSY++LPF + +R E G+ R R Sbjct: 325 IQTPEEGEEYLLKPMNCPHHCEIYKSTPKSYKDLPFRVAEFGTVYRYEQSGELHGLTRVR 384 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K + K+ L IF L + + I L Sbjct: 385 SFTQDDAHLF-CRPDQIKEEFIKVMEIILIIFKALRFDNFEAQ--------------ISL 429 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D E W A + E ++ E Sbjct: 430 RDKVDREKYIGSD-----------------------ENWEKAENAIIEACRETGLKAVVE 466 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP + GAD + H V + Sbjct: 467 YGEAAFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFELEYTGADNQKHRPVMIHRAPF 526 Query: 320 GAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G+M R VA +IE + GK +W P+ IS + + +++ +RL+ + Sbjct: 527 GSMERFVAVLIEHTA-GKFPLWLTPEQAVVLPIS--------EKFNEYAQQVASRLNILD 577 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 D E+IG + +L P +IVG+ + + V ++ + G + M ++E Sbjct: 578 VRAIGDFRDEKIGRKIRDNELKHIPYLLIVGNDEMETNTVAVRRQGEGDKGKMKVDE 634 >gi|300726434|ref|ZP_07059882.1| threonine--tRNA ligase [Prevotella bryantii B14] gi|299776282|gb|EFI72844.1| threonine--tRNA ligase [Prevotella bryantii B14] Length = 654 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 90/417 (21%), Positives = 152/417 (36%), Gaps = 65/417 (15%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + ++R E+ P + S +L++ SG + YGK+ + Sbjct: 262 GKGLPIWLPKGTQLRLRLQELLRRVLKPYNYQEVITPGIGSKNLYITSGHWAHYGKDAFQ 321 Query: 96 L--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 D+ + P + +I+ +SY++LP + FR E G+ R Sbjct: 322 PIHTPEEDEEYMLKPMNCPHHCEIYARKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRV 381 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F + P+ K + ++F G + I Sbjct: 382 RTFTQDDAHIF-VRPDQVKAEFENNIDIIQKVFSIFGFNDYEAQ--------------IS 426 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 L D +T+ + D E W A + EK ++ Sbjct: 427 LRDPKDTEKYIGSD-----------------------EIWEESQNAIREACKEKGLKAVE 463 Query: 273 ENKRVSARGIE--------VGHIFYFGT---KYSLPMSATFKGAD---GKDHYVQMGSYG 318 E + G + +G + GT Y+LP + D K V + Sbjct: 464 EEGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFKLEYTDVDNTKKTPVMIHRAP 523 Query: 319 IGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G++ AV+ G+ +W PD VA IS + D +K+ A L K Sbjct: 524 FGSLERFTAVLIEHTAGRFPLWLIPDQVAILPIS--------EKYNDYAKKVKAYLDKHD 575 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + DD E++G + +L P VIVG K V ++ + G + M++EE Sbjct: 576 VRGYIDDRNEKVGRKIRDNELKRVPYMVIVGEKEAEGGLVSMRKQGGGDQASMTMEE 632 >gi|193215696|ref|YP_001996895.1| threonyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] gi|238692696|sp|B3QUU7|SYT_CHLT3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|193089173|gb|ACF14448.1| threonyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] Length = 659 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 86/425 (20%), Positives = 160/425 (37%), Gaps = 56/425 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + + + +++EQ R G + + P + + +L+ SG Y Y L Sbjct: 273 GLPMWLPKGAILRNELESFLKDEQRRRGYLPVVTPHIGNIELYKTSGHYPYYSDSQFPPL 332 Query: 95 RLADR--NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D ++ + P + I+ S +SYR+LP + +R E G++R Sbjct: 333 TFTDELGKEEQYLLKPMNCPHHHQIYSSKPRSYRDLPIRLTEFGTVYRYEQSGELNGLIR 392 Query: 152 SREFLMKDAYSF----DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 R F D++ + L E K FV F LG + R Sbjct: 393 VRGFTQDDSHIYCRQDQLVDEICKAIDLTQFV-----FKTLGFAEVQTR----------- 436 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + L D T + + + + D D + LN + A + Sbjct: 437 ---LSLRDPENTSKYSGNNEVWVQAEQDLKDAADKMQLNYFIGLGEASFYGPK------- 486 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGA 321 D + + +G + GT Y +P T+ G+DG+ H V + G+ Sbjct: 487 IDFIVRDA--------IGRKWQLGTVQVDYVMPERFDLTYVGSDGQKHRPVVIHRAPFGS 538 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + ++ + G +W ++P ++ ++ I RD + +L G Sbjct: 539 LERFIGILIENFAGNFPVW---LSPVQVMVLPITDD---FRDYAHSVLQKLLDAGIRAEI 592 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 D+ GE++G + A++ P +VG K ++ + V ++ G + M L+E I Sbjct: 593 DERGEKVGKKIRDAEIKKIPYMFVVGEKEMAAASVAVRRHKEGDKGTMPLQEAIRLLQTD 652 Query: 442 FSNNR 446 S + Sbjct: 653 ISTKK 657 >gi|114152249|sp|Q2RZJ2|SYP_SALRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 490 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 5/153 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF D ++ YV S+G+ + R++ +I + D +G+ Sbjct: 232 GKALQAGTSHFLGQNFAKAFDCTFTNEDNEEEYVWATSWGV-STRLIGGLIMTHSDDQGL 290 Query: 339 IWPDSVAPFKISLINIKAHDQV---CRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAV 394 + P +AP ++ ++ + D + CE++ RL G V D Q G +F+ Sbjct: 291 VLPPKLAPHQVVIVPLFFDDDQEGPVMETCERLQERLEDHGIRVKMDQNHTQSPGWRFSE 350 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +L G PL++ +G + + + VE+ R T +E Sbjct: 351 HELRGVPLRLAIGPRDLENDNVEMARRDTQEKE 383 Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 105 IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 I PT E ++ D + I+SYR+LP + Q R E+RPR +R+ EFL ++ ++ Sbjct: 118 IVRPTSETIIWDTYSKWIQSYRDLPLLYNQWANVVRWEMRPRL-FLRTAEFLWQEGHT 174 >gi|330503839|ref|YP_004380708.1| threonyl-tRNA synthetase [Pseudomonas mendocina NK-01] gi|328918125|gb|AEB58956.1| threonyl-tRNA synthetase [Pseudomonas mendocina NK-01] Length = 640 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW SG + +Y + Sbjct: 255 LQEEAPGMVFWHPNGWTVYQVLEQYMRQVQREHGYVEVRTPQVVDRILWERSGHWSNYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M A N + P + IF +KSYR+LP + R+E G+M Sbjct: 315 NMFTTASENRDYAV-KPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F+ DA+ F + K + + + ++ L+++ G I M+ + P +G D Sbjct: 374 RVRGFVQDDAHIFCTEDQVKKEAADFIRLT-LQVYSDFGFTDIAMKLSTRPAKRVGSD 430 >gi|239947855|ref|ZP_04699608.1| threonyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] gi|241116864|ref|XP_002401645.1| threonyl-tRNA synthetase, putative [Ixodes scapularis] gi|215493189|gb|EEC02830.1| threonyl-tRNA synthetase, putative [Ixodes scapularis] gi|239922131|gb|EER22155.1| threonyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] Length = 635 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + ++G+ W G + + IR++ + G IE+ P L LW SG + + + Sbjct: 256 QEEAQGMVFWHDKGWSIYNIIEQYIRKKIRKNGYIEVKTPVLVDKSLWEASGHWKKFRDD 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M L + +DK + P + IF+ IKSYR+LP + L R+E G+MR Sbjct: 316 MFAL-ETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGLMR 374 Query: 152 SREFLMKDAYSF 163 R + DA+ F Sbjct: 375 VRSLVQDDAHIF 386 >gi|90407011|ref|ZP_01215201.1| threonyl-tRNA synthetase [Psychromonas sp. CNPT3] gi|90311882|gb|EAS39977.1| threonyl-tRNA synthetase [Psychromonas sp. CNPT3] Length = 635 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 89/422 (21%), Positives = 149/422 (35%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W G + IRE+ G E+ P + LW +SG + Y Sbjct: 255 MQDEAPGMVFWHANGWTIYRELEKYIREQTEEYGYQEVKAPQILDRSLWEKSGHWAKYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N I P + IF +KSYR+LP + R+E G+M Sbjct: 315 NMFCTCSENRDYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMSEFGSCHRNEPSGSLHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + G ++I ++ + P +G D + Sbjct: 374 RVRAFTQDDAHIF-CTEAQILDEVSSCIKMVFECYKTFGFENIDVKLSTRPEQRVGDDAT 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ D +P E + I L Sbjct: 433 WD---KAEAALADALTKNDVEFSWLPGEGAFYGPKIEFT--------------------L 469 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G I +S+P + ATF G D + H M I G++ Sbjct: 470 HDCL-------GRAWQCGTI---QLDFSMPGRLDATFVGEDNERHTPVMIHRAILGSLER 519 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G I+P ++P ++ ++NI + ++ +L K G V D Sbjct: 520 WIGILTEEYAG---IFPTWLSPQQVVVMNITDKQS---EYVAEVVTKLKKSGIRVISDLR 573 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++VG K V ++ I+ R +++ I Y Sbjct: 574 NEKIGFKIREHTLKRVPYLLVVGDKEVEARELSIRTRKGDDLGKFKIDDFITYIKEEIVT 633 Query: 445 NR 446 R Sbjct: 634 RR 635 >gi|121997230|ref|YP_001002017.1| threonyl-tRNA synthetase [Halorhodospira halophila SL1] gi|166223346|sp|A1WU53|SYT_HALHL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|121588635|gb|ABM61215.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Halorhodospira halophila SL1] Length = 640 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 99/444 (22%), Positives = 171/444 (38%), Gaps = 65/444 (14%) Query: 17 DAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + RT + + S G+ W P G + V IR G E+ P Sbjct: 237 EAERRDHRRLGRTQDLFHVQEESPGMVFWHPRGWRLYLEVQDYIRRLMRDNGYQEIHTPM 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 L LW SG + + + M + + + P + ++F+ +KSYR+LP Sbjct: 297 LVDRSLWERSGHWAMFAENMF-VTESESRDYAVKPMNCPCHVEVFKQGLKSYRDLPLRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLK 191 + R+E G+MR R F+ DA+ F E + F+ + R + G + Sbjct: 356 EFGSCHRNEPSGTLHGLMRVRGFVQDDAHIF--CTENQIQEEVRTFIDLVYRAYRDFGFE 413 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDF--MDFPI-PSENTDFDDIISL 245 + + + P +G D L D E+ + + + +D+ + P E + I Sbjct: 414 DVLIALSTRPDERVGDD------ALWDKAESALATALETHGLDYTLQPGEGAFYGPKIEF 467 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFK 303 + L D L +RV G +S+P + A F Sbjct: 468 S--------------------LRDCL---ERVWQLGT-------IQVDFSMPGRLGAQFV 497 Query: 304 GADGKDHYVQMGSYGI-GAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG+ M I G++ R + +IE H G + P +AP + ++NI Sbjct: 498 DDDGERRTPVMLHRAILGSLERFIGILIE--HYGGAL--PTWLAPVQAVVLNITDRQA-- 551 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + +L + G D E+IG + L P +++G + + V ++HR Sbjct: 552 -DYARSVEQQLLESGFRAEADLRNEKIGYKIREHTLQKVPYMLVLGDRELESGTVAVRHR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M LEE++ R SN+ Sbjct: 611 DGTDLGSMELEELVA----RLSND 630 >gi|194333013|ref|YP_002014873.1| threonyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] gi|238693296|sp|B4S3D2|SYT_PROA2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194310831|gb|ACF45226.1| threonyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] Length = 657 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 90/415 (21%), Positives = 164/415 (39%), Gaps = 60/415 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + + +REEQ + G + + P + + L+ SG Y Y + Sbjct: 273 GLPIWLPKGAIVRNELESFLREEQRKRGYVPVYTPHIGNIGLYKRSGHYPYYSESQFPPL 332 Query: 98 DRND-----KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D + + P + I+ S ++SYR+LP + +R E G++R Sbjct: 333 TYTDDLGREEQYLLKPMNCPHHHMIYSSKLRSYRDLPIRLTEFGTVYRHEQSGELNGLIR 392 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 +R F D++ + + N + ++ +F LG I +R + Sbjct: 393 ARGFTQDDSHIYCRPDQLVDEICNAIDLTKF-VFATLGFDDIQIR--------------L 437 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 L D EN D + EQ +D N F + Sbjct: 438 SLHD------------------PENQ--DKYGGTKEVWEQAEKDVREAADRMNIDYFTGI 477 Query: 272 PENKRVSAR-----GIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 E + +G + GT Y +P ++ G+DG+ H V + G Sbjct: 478 GEASFYGPKIDFIVRDAIGRKWQLGTVQVDYVMPERFDLSYIGSDGQPHRPVIIHRAPFG 537 Query: 321 AM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 +M R + +IE + G +P +AP +I+++ I D+V D ++ L G V Sbjct: 538 SMERFIGVLIEHT----GGNFPLWLAPVQIAVLPIT--DEV-HDYAVQVRDTLHAAGMRV 590 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 D E+IG + +++ P VI+G K + +V ++ G + +M++EE+ Sbjct: 591 ELDTRSEKIGKKIRESEVAKIPYMVIIGQKEAAAGEVSLRRHREGDQGNMTVEEL 645 >gi|297184115|gb|ADI20234.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 501 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 81/160 (50%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F+ +GK YV S+G+ + R++ A+I + D G+ Sbjct: 243 GKALQAGTSHFLGQNFAKAFEVKFQNKEGKQEYVWATSWGV-STRLMGALIMTHSDDNGL 301 Query: 339 IWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP+++ ++ I K +Q+ + E + +L G V +D+ + G +F Sbjct: 302 VLPPKLAPYQVVIVPIYKGQEQLDAISEVAEDLMGQLRAQGITVKYDNRDTHKPGWKFNQ 361 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +L G PL++ +G K + VE+ R T ++ + +EV Sbjct: 362 YELQGIPLRIAIGPKDLEKGSVELARRDTLTKQFVDQKEV 401 Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ D ++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 125 EEELIVRPTSETIIWDTYKDWIQSYRDLPILVNQWANVVRWEMRTRL-FLRTAEFLWQEG 183 Query: 161 YSFDLTPE 168 ++ T + Sbjct: 184 HTAHATKQ 191 >gi|222100818|ref|YP_002535386.1| Threonyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] gi|254783544|sp|B9KAN7|SYT_THENN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|221573208|gb|ACM24020.1| Threonyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] Length = 640 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 85/405 (20%), Positives = 161/405 (39%), Gaps = 41/405 (10%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 ++ G+ +LP G L+ + RE G E+ P + + LW SG +D Y + M Sbjct: 257 YAPGMPFFLPRGVIVLNELMNFSRELHRERGYQEIFTPLIMNEQLWRISGHWDHYAENMY 316 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ ++ P + +++S SYR+LP F++ R E G+MR R Sbjct: 317 -FIEKGEERYAVKPMNCPGHILVYKSRAVSYRDLPLRFFEFGRVHRYERSGVLHGLMRVR 375 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIV 212 F DA+ F TP+ + + I+ + G R E + D + E I Sbjct: 376 SFTQDDAHIF-CTPDQIEDEILGVLELINTIYSQFGFT---YRVELSTMPEDHMGDEAIW 431 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 T + + + + + F Y D H + DSL Sbjct: 432 EKATNALKKALDRAGLPYRVNEGEGAF----------------YGPKIDFH---IKDSLG 472 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIES 331 + + ++ F K+++ T+ G D ++H M I G++ ++ Sbjct: 473 REWQCATIQLD----FMMPEKFNV----TYIGPDNREHTAVMIHRAIYGSLERFFGILIE 524 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G +P +AP ++++I I + +K+ LS+ G VF DD E +G + Sbjct: 525 HFAGA---FPTWIAPVQVAVIPISDKHS---EGAKKVATMLSREGFRVFLDDRRETLGYR 578 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A + P V++G + + K+ ++ R +D+ ++ I+ Sbjct: 579 IRQAQIQKIPYMVVLGDRELESGKLSVRTRSGKEIKDVEMDHFID 623 >gi|34540714|ref|NP_905193.1| prolyl-tRNA synthetase [Porphyromonas gingivalis W83] gi|81417446|sp|Q7MVS7|SYP_PORGI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|34397028|gb|AAQ66092.1| prolyl-tRNA synthetase [Porphyromonas gingivalis W83] Length = 493 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 84/160 (52%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ + TF DG +V S+G+ + R++ A+I S D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFNVTFADKDGNRDFVWATSWGV-STRLMGALIMSHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP+++ +I I +++ EK I L G V +D+ ++ G +FA Sbjct: 295 VLPPKLAPYQVVIIPIYRNEEQLAQIDEKATQITQALRAKGISVKYDNSDNKKPGWKFAE 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +L G P+++ +G++ + ++ +EI R T +E + L+ + Sbjct: 355 YELKGIPVRLAMGARDLENNTIEIARRDTLTKETVGLDGI 394 Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ I+S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEELIVRPTSETIIWNTYKNWIQSHRDLPILCNQWANVVRWEMRTRL-FLRTAEFLWQEG 176 Query: 161 YSFDLT 166 ++ T Sbjct: 177 HTAHAT 182 >gi|317495533|ref|ZP_07953901.1| threonyl-tRNA synthetase [Gemella moribillum M424] gi|316914347|gb|EFV35825.1| threonyl-tRNA synthetase [Gemella moribillum M424] Length = 647 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 87/386 (22%), Positives = 158/386 (40%), Gaps = 36/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L S DL++ SG ++ Y ++M Sbjct: 262 GLPLWLPNGATIRRTIERYIVDKEVELGYDHVYTPVLGSKDLYITSGHWEHYQEDMFPPM 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + + M+ P + ++++ SYR LP ++ + R E G+ R R Sbjct: 322 EMDHETMVLRPMNCPHHMMVYKNERHSYRELPIRIAELGMMHRYESSGAVSGLQRVRGMT 381 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 + DA+ F + P+ K + + LG+ + R LS+ D Sbjct: 382 LNDAHIF-VRPDQLKDEFKLTVGLIEEAYKDLGITNFSYR---------LSYR-----DP 426 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPENK 275 T+ + D M + D + L+ + E A Y DV E K Sbjct: 427 ENTEKYFDDDVMWNNAQQMLKETADELGLDYVEAEGEAAFYGPKLDVQVETAI-----GK 481 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSH 333 + + I++ F ++ L + G DGK H + GI + R+VA ++E Sbjct: 482 QETLSTIQLD--FLLPERFEL----EYIGEDGKAHRPVVIHRGIVSTMERMVAFLLEEY- 534 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 KG + P +AP ++ +I + ++ D ++I L K G V DD E++G + Sbjct: 535 --KGDL-PTWLAPNQVRIIPV--NNDYHYDYSKEIMQELKKAGVKVAIDDRDEKLGYKIR 589 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P +++G K V + V ++ Sbjct: 590 EAANKKIPYTLVIGDKEVENKGVNVR 615 >gi|195035423|ref|XP_001989177.1| GH11579 [Drosophila grimshawi] gi|193905177|gb|EDW04044.1| GH11579 [Drosophila grimshawi] Length = 493 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 91/413 (22%), Positives = 170/413 (41%), Gaps = 48/413 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G + P G + + +IR E + G E+ P + +A LW+ SG + Y Sbjct: 106 FFHELSPGSCFFQPRGAHIYNTLMNLIRGEYRKRGFQEVISPNIYNAKLWMTSGHWQHYA 165 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M +K + P + IF + +S+R LP + R+EL G+ Sbjct: 166 DNMFSFEAEKEKFAL-KPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGL 224 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F PE K S K + +LR + + S + + P G+L Sbjct: 225 TRVRRFQQDDAHIF-CAPEQIK-SEMKGCLDFLRHVYTIFGFSFQLVLSTRPEQYLGELE 282 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 D E + S D P + D A Y D+ + Sbjct: 283 Q-----WDAAEKALAESLDEFGMPWKENHGD--------------GAFYGPKIDI---TI 320 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVA 326 D+L + + ++ F +++L + DG K V + +G++ + Sbjct: 321 MDALKRPFQCATIQLD----FQLPIRFNL----NYIADDGEKKRPVIIHRAILGSVERMI 372 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYAR--LSKVGCDVFWDD 383 A++ ++ GK WP ++P ++ ++ + A+D+ + +++YA +S+ CD Sbjct: 373 AILTENYAGK---WPFWLSPRQVMVVPVGPAYDEYAKSVRDQLYAAGFMSESDCDA---- 425 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G+ + + A L F ++VG K S + V ++ R + ++S+ E+I+ Sbjct: 426 -GDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELIS 477 >gi|260170261|ref|ZP_05756673.1| prolyl-tRNA synthetase [Bacteroides sp. D2] gi|315918623|ref|ZP_07914863.1| prolyl-tRNA synthetase [Bacteroides sp. D2] gi|313692498|gb|EFS29333.1| prolyl-tRNA synthetase [Bacteroides sp. D2] Length = 497 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 88/166 (53%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I A+L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +E+ R T +E ++ E + Y + Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCEGIETYVQN 400 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|257876814|ref|ZP_05656467.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257810980|gb|EEV39800.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 477 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 3/173 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GTK++ T+ + K + S+G+ + R++ A+I + D G+ Sbjct: 214 GKAVQAGTSHYMGTKFAEAFDITYLTKENKHTHAHTTSWGV-STRLLGALIMTHGDENGL 272 Query: 339 IWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 ++P ++AP ++ L+ + + + E++YA G V DD G +F + Sbjct: 273 VFPPTIAPTQVVLLPVGPWKKNPAILEKLEELYANFKAKGIRVRLDDSDNSPGYKFNEWE 332 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L G L++ G + + KV +K R ++ ++LEE+ + P L Sbjct: 333 LKGACLRIECGPRDLEAGKVMVKVRDLADKQTVALEELEAFVDQELQAMTPRL 385 >gi|255320853|ref|ZP_05362027.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|262380254|ref|ZP_06073409.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SH164] gi|255302022|gb|EET81265.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|262298448|gb|EEY86362.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SH164] Length = 640 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 84/400 (21%), Positives = 151/400 (37%), Gaps = 54/400 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +Y Sbjct: 255 MQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTLWEKSGHAANYAD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSESRNYAV-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGPEVADFIKLTLDVYKDFGFEDVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L++ +W + K+ Sbjct: 431 ----ALWDMAE------KSLAD--------------ALDAAGLEWEL-QPGEGAFYGPKI 465 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP + A+F D +D V + +G+ Sbjct: 466 EFSLKDC---------LGRVWQCGTIQCDFNLPERLDASFVTEDNERDQPVMLHRAILGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P +AP + ++NI ACE++ A+L + G Sbjct: 517 FERFIGILIEHYAG---FMPPWLAPVQACVMNITDSQA---QACEQVVAKLKENGIRAIS 570 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + L P +++G + V + V ++ R Sbjct: 571 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTR 610 >gi|160882791|ref|ZP_02063794.1| hypothetical protein BACOVA_00752 [Bacteroides ovatus ATCC 8483] gi|156111815|gb|EDO13560.1| hypothetical protein BACOVA_00752 [Bacteroides ovatus ATCC 8483] Length = 497 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 88/166 (53%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I A+L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +E+ R T +E ++ E + Y + Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCEGIETYVQN 400 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|228937684|ref|ZP_04100320.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970572|ref|ZP_04131222.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977142|ref|ZP_04137543.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407] gi|228782590|gb|EEM30767.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407] gi|228789159|gb|EEM37088.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821971|gb|EEM67963.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938179|gb|AEA14075.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 476 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 79/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E + ++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQL 376 >gi|237716484|ref|ZP_04546965.1| prolyl-tRNA synthetase [Bacteroides sp. D1] gi|255691705|ref|ZP_05415380.1| proline--tRNA ligase [Bacteroides finegoldii DSM 17565] gi|262408082|ref|ZP_06084630.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|294809476|ref|ZP_06768179.1| proline--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] gi|298484158|ref|ZP_07002324.1| proline--tRNA ligase [Bacteroides sp. D22] gi|299145587|ref|ZP_07038655.1| proline--tRNA ligase [Bacteroides sp. 3_1_23] gi|229444131|gb|EEO49922.1| prolyl-tRNA synthetase [Bacteroides sp. D1] gi|260622644|gb|EEX45515.1| proline--tRNA ligase [Bacteroides finegoldii DSM 17565] gi|262354890|gb|EEZ03982.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|294443294|gb|EFG12058.1| proline--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] gi|295084169|emb|CBK65692.1| prolyl-tRNA synthetase [Bacteroides xylanisolvens XB1A] gi|298269662|gb|EFI11257.1| proline--tRNA ligase [Bacteroides sp. D22] gi|298516078|gb|EFI39959.1| proline--tRNA ligase [Bacteroides sp. 3_1_23] Length = 497 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 88/166 (53%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I A+L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +E+ R T +E ++ E + Y + Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCEGIETYVQN 400 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|330958898|gb|EGH59158.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 640 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 91/422 (21%), Positives = 159/422 (37%), Gaps = 65/422 (15%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY-LRIFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ L ++ G K Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIKLTLAVYADFGFK 413 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISL 245 I ++ + P +G D L D E+ + + D P P E + I Sbjct: 414 DIELKLSTRPEKRVGSD------ELWDRAESALASALDSAGLPYDLQPGEGAFYGPKIEF 467 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSA 300 + L D L G ++ GT ++LP +SA Sbjct: 468 S--------------------LKDCL-------------GRVWQCGTLQLDFNLPIRLSA 494 Query: 301 TFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + + V + +G+ ++ ++G W +AP + ++NI Sbjct: 495 EYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPTQAVIMNITDKQA 551 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L++ G D E+IG + LL P +++G + V V ++ Sbjct: 552 ---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608 Query: 420 HR 421 R Sbjct: 609 TR 610 >gi|257784431|ref|YP_003179648.1| threonyl-tRNA synthetase [Atopobium parvulum DSM 20469] gi|257472938|gb|ACV51057.1| threonyl-tRNA synthetase [Atopobium parvulum DSM 20469] Length = 588 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 89/393 (22%), Positives = 157/393 (39%), Gaps = 60/393 (15%) Query: 42 WLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND 101 WLP G + + E Q R G E+ P + S LW SG +D Y KE + ++ Sbjct: 218 WLPNGMALRNALTEYWHEMQARFGYQEVQTPLILSRSLWETSGHWDHY-KENMYTTTVDE 276 Query: 102 KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDA 160 + P + I++S +SYR+LP + L R E++ G+ R REF DA Sbjct: 277 EDFAIKPMNCPGACLIYKSKPRSYRDLPMKLAEAGLDHRYEMKGALHGLFRVREFTQDDA 336 Query: 161 YSF----DLTPEGSKHSYNKMFVSYLRIF---HRLGLKSIPMRAESGPIGGDLSHEFIVL 213 + F +T + + S+ + +Y F +R+ L + P +G D E Sbjct: 337 HLFIRPDQITEQVTDASH--LITAYYAQFGFPYRVELSTRP----EDSMGSDEDWE---R 387 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT-APYAATSDVHNEKLFDSLP 272 A+ G D + ++ +V + A Y D H L D L Sbjct: 388 AEQGLRDAL------------------DAMGIDYVVNEGDGAFYGPKIDFH---LTDCL- 425 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVI 329 R + G I + LP + +DG K + + G G+ ++ Sbjct: 426 ------GRSWQCGTI---QLDFQLPHNFQLEYIDSDGTKKQPIMIHRAGFGSFERFIGIL 476 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 +++GK +W ++P ++ ++ + + R ++ +L+ G V DD E+IG Sbjct: 477 TENYEGKFPVW---LSPCQVKILPVS---EKSRSYAHEVADKLAAAGIRVKVDDRDEKIG 530 Query: 390 SQFAVADLLG-FPLQVIVGSKFVSDSKVEIKHR 421 + A L P +I+G + V + ++ R Sbjct: 531 YKIREARSLDRVPYMLILGEQEVEAGNISVRDR 563 >gi|237720697|ref|ZP_04551178.1| prolyl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|293373969|ref|ZP_06620310.1| proline--tRNA ligase [Bacteroides ovatus SD CMC 3f] gi|229449532|gb|EEO55323.1| prolyl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|292631045|gb|EFF49682.1| proline--tRNA ligase [Bacteroides ovatus SD CMC 3f] Length = 497 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 88/166 (53%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I A+L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +E+ R T +E ++ E + Y + Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCEGIETYVQN 400 Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|224002114|ref|XP_002290729.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974151|gb|EED92481.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 791 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 5/163 (3%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K L + QEN A+ H+ + + M H+ S G WLP G + + + I+E Sbjct: 376 KKMLKVWQENQEKAKERDHRRIAQQQDLVMFHELSAGSAFWLPHGARIYNKLIEFIKEHY 435 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 R G E+ P + + DLW +SG Y K+ + D K P + +F Sbjct: 436 WRRGYDEIITPNIYNLDLWHQSGHAMHY-KDAMFCFDVEGKEWAMKPMNCPGHCLMFAGK 494 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 I+SYR+LP F + R+EL G+ R R F DA+ + Sbjct: 495 IRSYRDLPIRFADFGVLHRNELSGALSGLTRVRRFQQDDAHIY 537 >gi|134301672|ref|YP_001121640.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|166223343|sp|A4IX68|SYT_FRATW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|134049449|gb|ABO46520.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] Length = 634 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 79/382 (20%), Positives = 146/382 (38%), Gaps = 48/382 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S GI W G + V +R N+ G E+ P + LW +SG Y + Sbjct: 255 QEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSGHASKYAEN 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N I P + ++ + + SYR+LP + + R+E G++R Sbjct: 315 MFATKSENRDFAIR-PMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLR 373 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F TPE + M ++ G ++ P IG D + Sbjct: 374 VRSFTQDDGHIF-CTPEQVEEEVILMVQQCFEVYKDFGFNDFAIKIALRPENRIGDDETW 432 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + S+ + + + N ++ ++ A Y + H L Sbjct: 433 DK-------------SEQMLKNALDANNVSYE-------LLPGEGAFYGPKIEFH---LK 469 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 D++ R + G I +S+P + AT+ +G+ V + +G++ Sbjct: 470 DAI-------GRSWQCGTI---QLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP +++++ I + D C++++ L K G D Sbjct: 520 IGMLIEHYAGNLPLW---LAPVQVAVMGISNNQD---DYCKEVFIMLEKNGIRAKLDLRN 573 Query: 386 EQIGSQFAVADLLGFPLQVIVG 407 E+IG + LL P VI+G Sbjct: 574 EKIGFKIREHTLLRVPYLVILG 595 >gi|282858709|ref|ZP_06267863.1| threonine--tRNA ligase [Prevotella bivia JCVIHMP010] gi|282588513|gb|EFB93664.1| threonine--tRNA ligase [Prevotella bivia JCVIHMP010] Length = 649 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 88/419 (21%), Positives = 156/419 (37%), Gaps = 65/419 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 KG+ WLP G + + ++R+ E+ P + S +L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTQLRLRLQDLLRKLLKPYNYQEVITPGIGSKNLYVTSGHYAHYGKDAFQP 322 Query: 96 -LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + +I+ +SY++LP + +R E G+ R R Sbjct: 323 IQTPEEDEEYMLKPMNCPHHCEIYAHKPRSYKDLPLRIAEFGTVYRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + P+ K + L++F G ++ + I L Sbjct: 383 NFTQDDAHIF-VRPDQVKAEFENNIDIILKVFKTFGFENYEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + +D + W A + EK + E Sbjct: 428 RDPEDKEKYIGED-----------------------DVWNESEQAIKEACAEKGLKATVE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLPMS--ATFKGADG-KDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 LGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFHLEYTAEDNTKKTPVMVHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+M AV+ G +W PD VA IS + D ++ +L G Sbjct: 525 GSMERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYAREVMQKLDTAGV 576 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DD E+IG + +L P V+VG K ++ V ++ + G + M++++ I+ Sbjct: 577 RALIDDRNEKIGRKIRDNELKRIPYMVVVGEKEAAEGLVAMRKQGGGEQSTMTIQQFID 635 >gi|301629969|ref|XP_002944104.1| PREDICTED: threonyl-tRNA synthetase-like [Xenopus (Silurana) tropicalis] Length = 841 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 89/391 (22%), Positives = 150/391 (38%), Gaps = 56/391 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I +H+ G W P G V +R G E+ P + LW ++G +D Y + Sbjct: 255 IDEHAPGTVFWHPKGWMLWQEVEQYMRRVYRDNGYQEVKGPQILDKTLWEKTGHWDKYRE 314 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + +++ D A+ P + IF+ IKSYR+LP F + R+E G+ Sbjct: 315 NMFITESEKRDYAL--KPMNCPGHILIFKQGIKSYRDLPLRFGEFGNCHRNEPTGGLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGD 205 MR R F D + F E S F + L R++ G I R + P IG + Sbjct: 373 MRVRGFTQDDGHIF--CTEDMIQSEVATFTTLLQRVYRDFGFTEILYRLSTRPEKRIGSE 430 Query: 206 LSHEFI--VLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATS 260 S + LA+ G C+ +++ P E + I +++ +W T Sbjct: 431 ESWDRAESALAE-GLRASGCTFEYL----PGEGAFYGPKIEYVLKDALGREWQ---CGTI 482 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGI 319 V ++PE + A F G DG H + + + Sbjct: 483 QVD-----PNMPER-----------------------LDAEFVGEDGARHRPIVLHRAIV 514 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCD 378 G++ ++ G +W +AP +++++NI A CR+ K++ L Sbjct: 515 GSLERFIGILIEQFAGALPVW---LAPVQVAVLNITDAQADYCREIAAKLHKALPNQSLR 571 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 D E+I + L P ++VG K Sbjct: 572 AVTDLRNEKITYKIREHALQKLPYILVVGDK 602 >gi|297623866|ref|YP_003705300.1| threonyl-tRNA synthetase [Truepera radiovictrix DSM 17093] gi|297165046|gb|ADI14757.1| threonyl-tRNA synthetase [Truepera radiovictrix DSM 17093] Length = 665 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 84/413 (20%), Positives = 160/413 (38%), Gaps = 54/413 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G ++ + + +E + R G ++ P + L+ SG Y + M Sbjct: 271 GLPLWLPRGAVIVEEIEKLAKEMERRAGYQQVRTPHVTKEQLFTRSGHLPYYAESMFPPM 330 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + ++ P + IF + +SYR LP + +R ++ G+MR R Sbjct: 331 ELDNVRYYLKPMNCPFHHKIFAARPRSYRELPLRLAEYGTCYRYEDHGALMGLMRVRSMQ 390 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 M DA+ + TPE + + + YL F G++ MR + Sbjct: 391 MNDAHIY-CTPEQFEDEFMGVIALYLEYFRLFGIRDYVMRL------------------S 431 Query: 217 GETQVFCSKDFMDFPIPSENTD--FDDIISLNSI----VEQWTAPYAATSDVHNEKLFDS 270 ++ K +++ P E T+ + I VE A Y DV +++ Sbjct: 432 KHSRAGLGKKYVNNPELWEQTEAMVRGALERGGINFIEVEDEAAFYGPKIDV---QIYSV 488 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD------HYVQMGSYGIGAMRV 324 + ++ ++ FG +Y DG H + ++ R+ Sbjct: 489 IGREFTLATNQVDFAVPARFGLEYV--------AEDGSRKTPLCLHRAPLSTH----ERL 536 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 V ++E G +W +AP ++ ++ I + + ARL++ G D Sbjct: 537 VGFLLE-HFAGDFPLW---LAPEQVRVVPIADRHNAY---AQSLKARLAEAGLRAEADLR 589 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 GE++ ++ A+LL P VIVG K V + + R ++ +S+E + + Sbjct: 590 GERMNAKVRDAELLKVPYTVIVGDKEVEAGALSFRSRKEPEQKGVSVEAFVAH 642 >gi|148653933|ref|YP_001281026.1| threonyl-tRNA synthetase [Psychrobacter sp. PRwf-1] gi|172048584|sp|A5WHD5|SYT_PSYWF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148573017|gb|ABQ95076.1| threonyl-tRNA synthetase [Psychrobacter sp. PRwf-1] Length = 644 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 86/405 (21%), Positives = 150/405 (37%), Gaps = 64/405 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G + +R+ Q G E+ P + LW +SG + +Y Sbjct: 255 MQEQSPGMVFWHPNGWTIYQVLEQYMRKVQKDNGYQEIKTPQIVDRSLWEKSGHWGNYAT 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + + P + +F +KSYR LP + R+E G+M Sbjct: 315 NMFTTSSESRDYAV-KPMNCPCHVQVFNQGLKSYRELPIRLAEFGSCHRNEPSGSLHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + N + ++ L ++ G I M+ + P +G D S Sbjct: 374 RVRGFTQDDAHIFCTQAQIQEEVANFIKLT-LDVYKDFGFDQIEMKLSTRPEKRVGTDES 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + +A+ S +P E + I + L Sbjct: 433 WD---IAEKALADALDSSGLEWEYLPGEGAFYGPKIEFS--------------------L 469 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP-----MSATFKGADGKD------HYVQMGS 316 DSL G ++ GT P + A F + + H +GS Sbjct: 470 KDSL-------------GRVWQCGTIQVDPNMPERLEAEFVNENNERETPIMLHRAILGS 516 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 + R + +IE + G +W +AP ++ ++NI DAC+ + + L G Sbjct: 517 F----ERFLGMLIE-HYAGWMPVW---LAPQQVVVMNITDKQA---DACQNVASELQNAG 565 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + L P +++G K V +V ++ R Sbjct: 566 LRAITDLRNEKIGFKIRERTLERIPYMLVLGDKEVESGQVNVRTR 610 >gi|195114918|ref|XP_002002014.1| GI17149 [Drosophila mojavensis] gi|193912589|gb|EDW11456.1| GI17149 [Drosophila mojavensis] Length = 691 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 91/412 (22%), Positives = 173/412 (41%), Gaps = 48/412 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G + P G + + +IR E + G E+ P + +A LW+ SG + Y Sbjct: 305 FHELSPGSCFFQPRGAHIYNTLMNLIRGEYRKRGFQEVISPNIYNAKLWMTSGHWQHYAD 364 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M +K + P + IF + +S+R LP + R+EL G+ Sbjct: 365 NMFSFEAEKEKFAL-KPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLT 423 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--GDLSH 208 R R F DA+ F PE K S K + +LR + + S + + P G+L Sbjct: 424 RVRRFQQDDAHIF-CAPEQIK-SEMKGCLDFLRHVYTIFGFSFQLVLSTRPDKYLGELDQ 481 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 D E + ++ +F +P + D A Y D+ + Sbjct: 482 -----WDAAEKAL--AESLNEFGMPWKENPGDG------------AFYGPKIDI---TIM 519 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 D+L + + ++ F +++L + DG K V + +G++ + A Sbjct: 520 DALKRPFQCATIQLD----FQLPIRFNL----NYIADDGEKRRPVIIHRAILGSVERMIA 571 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYAR--LSKVGCDVFWDDM 384 ++ ++ GK WP ++P ++ ++ + A+D+ + +++YA +S+V CD Sbjct: 572 ILTENYAGK---WPFWLSPRQVMVVPVGPAYDEYAKTVRDELYAAGFMSEVDCDA----- 623 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G+ + + A L F ++VG K S V ++ R + ++S+ E+I+ Sbjct: 624 GDTMNKKIRNAQLAQFNFILVVGDKERSSKTVNVRTRDNKVHGEVSVAELIS 675 >gi|28869575|ref|NP_792194.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|213970495|ref|ZP_03398622.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] gi|301384174|ref|ZP_07232592.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13] gi|302132643|ref|ZP_07258633.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|38258312|sp|Q883H9|SYT_PSESM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|28852817|gb|AAO55889.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|213924666|gb|EEB58234.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] gi|330876789|gb|EGH10938.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|331016139|gb|EGH96195.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 640 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 91/422 (21%), Positives = 159/422 (37%), Gaps = 65/422 (15%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTQSESRDYAI-KPMNCPCHVQVFNQGLKSYRELPLRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY-LRIFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ L ++ G K Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIKLTLDVYADFGFK 413 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISL 245 I ++ + P +G D L D E+ + + D P P E + I Sbjct: 414 DIELKLSTRPEKRVGSD------ELWDRAESALASALDSAGLPYDLQPGEGAFYGPKIEF 467 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSA 300 + L D L G ++ GT ++LP +SA Sbjct: 468 S--------------------LKDCL-------------GRVWQCGTLQLDFNLPIRLSA 494 Query: 301 TFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + + V + +G+ ++ ++G W +AP + ++NI Sbjct: 495 EYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPTQAVIMNITDKQA 551 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L++ G D E+IG + LL P +++G + V V ++ Sbjct: 552 ---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608 Query: 420 HR 421 R Sbjct: 609 TR 610 >gi|219113189|ref|XP_002186178.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583028|gb|ACI65648.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 684 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 91/438 (20%), Positives = 173/438 (39%), Gaps = 45/438 (10%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + +L+E RD + KL L + + G+ W P G K + ++ + Sbjct: 258 KQYKKMLEEAKKRDHRMLGKKLDLFS-IQEDAGGGLVFWHPKGSKVRRMIEDFWKDAHIQ 316 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + DLW SG +D Y +M D ++ P + +++ ++ Sbjct: 317 DGYDVVYSPHIANIDLWKTSGHFDFYRADMFDQMDVENEQYQIKPMNCPFHCLMYKDELR 376 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR R F DA+ F L PE + + Sbjct: 377 SYRDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCL-PEQLQDEIVGVLDLTE 435 Query: 183 RIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I R G + + P +G D + +A G +V + D+ Sbjct: 436 TILSRFGFDKYDVMLSTRPEKSVGSDEIWDAATVALEGALKV-------------KGWDY 482 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + E A Y D+ K+ D++ + S + FG +Y+ Sbjct: 483 N-------VDEGGGAFYGPKIDL---KIRDAIGRQWQCSTVQCDFNLPERFGLEYA---- 528 Query: 300 ATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ADG M I G++ ++ + G +W +AP ++ L+ + Sbjct: 529 ----SADGTRERPIMVHRAIFGSIERFFGILIENCSGDFPLW---LAPTQLKLLPVT--- 578 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + C +I A+ K+G + D E++ Q A+ P+ +VG K + + + + Sbjct: 579 DAVHEYCNEIAAKALKMGLRIEVDRGSERLAKQIRNAEQARIPVMAVVGMKEMESNSLAV 638 Query: 419 KHRLTGIREDMSLEEVIN 436 + R G +E++++ Sbjct: 639 RSRKLGDLGSFEVEDLLS 656 >gi|213403436|ref|XP_002172490.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] gi|212000537|gb|EEB06197.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] Length = 699 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 85/403 (21%), Positives = 155/403 (38%), Gaps = 47/403 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + + A IRE+ G E+ P + + DLW SG +++Y Sbjct: 298 FFHELSPGSCFFLPHGARIYNQLIAWIREQYKIRGFQEVITPNMYNVDLWKTSGHWNNYA 357 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M DK + P + I++S +SYR+LP+ + R+E G+ Sbjct: 358 ENMFSFEIEKDKFAL-KPMNCPGHCLIYKSRDRSYRDLPWRCADFGVLHRNEFSGALTGL 416 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 R R F DA+ F P+ + F ++ G + R E + GDL Sbjct: 417 TRVRRFQQDDAHIF-CRPDQVRSEIENCFDFLKYVYGVFGFTFHLELSTRPEEKYL-GDL 474 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + E Q+ + D + D A Y D+ Sbjct: 475 E-----TWNKAEAQLKAALDASGYEWELNEGD--------------GAFYGPKIDI---T 512 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--------VQMGSYG 318 +FD+L + + ++ F ++ L T +G + D V + Sbjct: 513 VFDALKRQHQCATIQLD----FQLPERFELEFHGTTEGDEAADSTNKNKYIRPVMIHRAI 568 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G++ + A++ + GK WP ++P ++S++ + A D K+ RL G Sbjct: 569 LGSVERMIAILTEHYGGK---WPFWLSPRQVSVVPVSA---AAFDYANKVQKRLFDAGLF 622 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + + A L + +VG++ + V I++R Sbjct: 623 ADVDTSDNTLPKKIRNAQLSQYNFIFVVGAEEEKTNSVNIRNR 665 >gi|161524952|ref|YP_001579964.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189350300|ref|YP_001945928.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|238687005|sp|A9ABF9|SYT_BURM1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160342381|gb|ABX15467.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189334322|dbj|BAG43392.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] Length = 635 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 85/396 (21%), Positives = 152/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ DA+ F + ++NK+ +S R F G I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEEQIIAESIAFNKLAMSVYRDF---GFDHIDIKLSLRPEQRM 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 S E A+ G + + +P E A Y + H Sbjct: 428 GSDETWDRAEQGLREALTACGLQWEELPGEG-----------------AFYGPKIEYH-- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 + D+L + + +++ G +Y + + V + +G+M Sbjct: 469 -IKDALGRSWQCGTLQLDMMLPERLGAEY-------VAEDNSRRRPVMLHRAIVGSMERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H G +W +AP + ++NI A QV + + + L K G V D Sbjct: 521 LGILIEHHAGAMPVW---LAPVQAVVLNI-AESQV--EYAQSLAQTLQKQGLRVTADLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P ++VG K V ++ R Sbjct: 575 EKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRAR 610 >gi|310658431|ref|YP_003936152.1| threonyl-tRNA synthetase [Clostridium sticklandii DSM 519] gi|308825209|emb|CBH21247.1| threonyl-tRNA synthetase [Clostridium sticklandii] Length = 637 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 85/392 (21%), Positives = 155/392 (39%), Gaps = 45/392 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G +LP G + + RE G +E+ P + + LW SG + +Y KE + Sbjct: 261 GFPFFLPKGTVLKNKLLEYWREVHREDGYVEIETPIILNRQLWETSGHWFNY-KENMYTV 319 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +++ P + ++++ ++SY++ P +I R EL G+MR R F Sbjct: 320 EIDEEDFAIKPMNCPGGMLVYQTKMRSYKDFPIRMGEIGRVHRHELSGALHGLMRVRAFT 379 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLAD 215 DA+ F + PE K + +I+ G + + G++S + D Sbjct: 380 QDDAHIF-MLPEQIKDEIKGVVSLIDKIYKTFGFSYHLELSTRPEKFLGEIS-----MWD 433 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 E+ + + + + P D A Y D H L D + Sbjct: 434 EAESNLKAALEELGLPYIINEGD--------------GAFYGPKIDFH---LRDCI---- 472 Query: 276 RVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESS 332 R + G I Y LP ++ G DG+ H V + G++ ++ Sbjct: 473 ---GRTWQCGTI---QLDYQLPERFELSYIGKDGEKHRPVMIHRVAFGSIERFIGILIEH 526 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 + GK +W +AP ++ ++ I D+ D ++I + V DD E+IG + Sbjct: 527 YAGKFPLW---IAPVQVKILPIS--DKFM-DYAKQIEKAMYDAKIRVELDDRAEKIGYKI 580 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 A L P +IVG K +++ + ++ R G Sbjct: 581 REAQLEKVPYMIIVGEKELNEGNISVRSRDLG 612 >gi|251797403|ref|YP_003012134.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247545029|gb|ACT02048.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 482 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 83/164 (50%), Gaps = 10/164 (6%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GTK+++ + + + S+G+ + R++ A+I D +G+ Sbjct: 225 GKAVQAGTSHYLGTKFAVAFDIKYLDRENTLQFAHTTSWGV-STRLIGAMIMVHGDDRGL 283 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAV 394 P VAP ++ +I I K DQV +++YA L K G V DD + G +F Sbjct: 284 ALPPKVAPTQVIMIPIGPAKTRDQVV-GRVDELYAELKKAGVRVKVDDRSDVSPGWKFNE 342 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEV 434 ++ G PL++ +G + + + +V + R++G +R+D L EV Sbjct: 343 YEMRGVPLRLELGPRDMENGQVVLASRVSGEKRIVRQDNLLAEV 386 >gi|168188008|ref|ZP_02622643.1| threonyl-tRNA synthetase [Clostridium botulinum C str. Eklund] gi|169294168|gb|EDS76301.1| threonyl-tRNA synthetase [Clostridium botulinum C str. Eklund] Length = 637 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 93/412 (22%), Positives = 165/412 (40%), Gaps = 51/412 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G + P G + + RE + G E+ P + + LW +SG +D Y + Sbjct: 255 LKEEGPGFPFFYPKGMILRNTLENYWREMHEKAGYGEIRTPIILNEKLWHQSGHWDHYKE 314 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + +++S + SYR LP ++ L R E G+ Sbjct: 315 NMYFTKIDGEDYAI--KPMNCPGSILVYKSDLHSYRELPIRLGELGLVHRHEYSGALHGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYN--KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 MR R F DA+ F + + KM ++ +F + R E +G D Sbjct: 373 MRVRNFTQDDAHIFMTKEQITSEILGVIKMIDNFYSLFGFEYFVELSTRPEDS-MGSDEE 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A T ++ +++ I + F Y D H L Sbjct: 432 WE----AATNGLVKALNEAGLEYKINEGDGAF----------------YGPKIDFH---L 468 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMR 323 D L R + G I F ++ L ++ G DG+ H M I G++ Sbjct: 469 RDCL-------GRTWQCGTIQLDFQMPERFDL----SYVGPDGEKHRPVMAHRVIFGSIE 517 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++NI +QV + C++I L++ G V D Sbjct: 518 RFIGILTEHYAGA---FPTWLAPVQVKIMNI-TDNQV--EYCKEIQKALNESGIRVELDL 571 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + A L P +++G K ++++ + ++ R G M L++ I Sbjct: 572 RNEKIGYKIREAQLQKIPYMLVLGDKEMNENTIAVRARKQGDLGAMKLDDFI 623 >gi|330967298|gb|EGH67558.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 640 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 91/422 (21%), Positives = 159/422 (37%), Gaps = 65/422 (15%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTQSESRDYAI-KPMNCPCHVQVFNQGLKSYRELPLRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY-LRIFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ L ++ G K Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIKLTLDVYADFGFK 413 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISL 245 I ++ + P +G D L D E+ + + D P P E + I Sbjct: 414 DIELKLSTRPEKRVGSD------ELWDRAESALASALDSAGLPYDLQPGEGAFYGPKIEF 467 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSA 300 + L D L G ++ GT ++LP +SA Sbjct: 468 S--------------------LKDCL-------------GRVWQCGTLQLDFNLPIRLSA 494 Query: 301 TFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + + V + +G+ ++ ++G W +AP + ++NI Sbjct: 495 EYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPTQAVIMNITDKQA 551 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L++ G D E+IG + LL P +++G + V V ++ Sbjct: 552 ---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608 Query: 420 HR 421 R Sbjct: 609 TR 610 >gi|296228691|ref|XP_002759919.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 1 [Callithrix jacchus] Length = 718 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 102/432 (23%), Positives = 166/432 (38%), Gaps = 69/432 (15%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + + A IR E R G E+ PTL S LW +SG ++ Y Sbjct: 313 FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFFEVKTPTLFSTKLWEQSGHWEHYQ 372 Query: 91 KEMLRL----ADR------------NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 ++M + +DR + P + +F +S+R LP Sbjct: 373 EDMFAVQPPGSDRPASSQSDHSTRHTTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLAD 432 Query: 135 IQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-----GSKHSYNKMFVSYLRIFHRL 188 R E G+ R R F DA+ F T + S + + + L RL Sbjct: 433 FGALHRAEASGGLCGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRL 492 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 L + P SG +G C D + + +F + LNS Sbjct: 493 ALSTRP----SGFLGDP-----------------CLWDQAEQVLQQALKEFGEPWDLNSG 531 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SATFKGAD 306 A Y DVH L D+L R + G I + LP+ +KG Sbjct: 532 D---GAFYGPKIDVH---LHDAL-------GRPHQCGTI---QLDFQLPLRFDLQYKGQA 575 Query: 307 GK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDA 364 G + V + +G++ + V+ S GK WP ++PF++ +I + ++ R+ Sbjct: 576 GALERPVLIHRAVLGSVERLLGVLAESCRGK---WPLWLSPFQVVVIPVGTEQEEYARET 632 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + A + + CD+ D + + A L + Q +VG K S S V I+ R Sbjct: 633 QQSLQA--AGLVCDLDADSR-LTLSRRIRRAQLAHYNFQFVVGQKEQSKSTVNIRTRDNR 689 Query: 425 IREDMSLEEVIN 436 + + SL E + Sbjct: 690 LLGEWSLPEAVQ 701 >gi|290559900|gb|EFD93222.1| prolyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 477 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 80/370 (21%), Positives = 142/370 (38%), Gaps = 88/370 (23%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ + PT E +M D + IKSYR+LP Q R E + ++R RE L ++ Sbjct: 102 DERLALRPTSETIMYDSYSKWIKSYRDLPLLINQWNTMVRWETKETRLLLRGREVLWQEG 161 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGG--DLSHEFIVLADTGE 218 + T E + ++ ++ Y + + +IP+ I G S +F DT Sbjct: 162 HCVFRTEEEADNNAREILQFYKQYMEEM--LAIPV------IAGRKSESEKFAGAVDTYT 213 Query: 219 TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 + S +FM AATS HN Sbjct: 214 IEAVLSNNFMS--------------------------QAATS--HN-------------- 231 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 G +S P F + Y S+GI +MR + ++ D KG+ Sbjct: 232 -----------LGRNFSKPFDIKFLDENNNLQYPFQTSWGI-SMRSIGIMVLIHGDDKGL 279 Query: 339 IWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFW---DDMGEQIGSQFAV 394 + P +AP++ ++I I K + +K+ +L+++G DD+ G + Sbjct: 280 VLPPHIAPYQCAIIPILKDEKDKVLEYADKVNLKLNELGIRTILFNRDDVSP--GWKLND 337 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS----------LEEVINY------- 437 +D+ G P+++ +G K + + +K R++ ++ LEE+ NY Sbjct: 338 SDMKGIPIKIQIGKKELESDSIFVKTRISNEASSIAFSDISKIKDKLEEIQNYMLSNARE 397 Query: 438 -ASHRFSNNR 446 A+HR + Sbjct: 398 QANHRIKEEK 407 >gi|330973951|gb|EGH74017.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 640 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 91/422 (21%), Positives = 159/422 (37%), Gaps = 65/422 (15%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY-LRIFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ L ++ G K Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIKLTLDVYADFGFK 413 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISL 245 I ++ + P +G D L D E+ + + D P P E + I Sbjct: 414 DIELKLSTRPEKRVGSD------ELWDRAESALASALDSAGLPYDLQPGEGAFYGPKIEF 467 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSA 300 + L D L G ++ GT ++LP +SA Sbjct: 468 S--------------------LKDCL-------------GRVWQCGTLQLDFNLPIRLSA 494 Query: 301 TFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + + V + +G+ ++ ++G W +AP + ++NI Sbjct: 495 EYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPTQAVIMNITDKQA 551 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L++ G D E+IG + LL P +++G + V V ++ Sbjct: 552 ---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608 Query: 420 HR 421 R Sbjct: 609 TR 610 >gi|15606769|ref|NP_214149.1| threonyl-tRNA synthetase [Aquifex aeolicus VF5] gi|8928367|sp|O67583|SYT_AQUAE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2984004|gb|AAC07549.1| threonyl-tRNA synthetase [Aquifex aeolicus VF5] Length = 638 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 84/415 (20%), Positives = 162/415 (39%), Gaps = 47/415 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + +REE + G + P + + LW SG + Y + M Sbjct: 263 GLILWLPRGAIYRKVLEDYLREEHLKRGYQLVYTPHVGKSKLWETSGHLECYKQNMFPSM 322 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + I++S +SY+ LP +++ +R EL G++R R F Sbjct: 323 KIDEEEYYVKPMNCPFHIAIYKSRTRSYKELPLKLFELGTVYRYELSGVLHGLLRVRGFT 382 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ TPE + L G + + P E+ + +D Sbjct: 383 QDDAHIV-CTPEQVNDVIRETLDFALSTLKDFGFNEFKIYLSTRP-------EYSIGSD- 433 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 Q S++ + I +++ I E A Y DV K+ D+ Sbjct: 434 --EQWEVSQNALKKAIEDLGYEYE-------IDEGGGAFYGPKIDV---KIRDA------ 475 Query: 277 VSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIE 330 +G ++ T ++LP T+ G D K H M +G++ ++ Sbjct: 476 -------IGRMWQLSTIQFDFNLPERFDMTYVGPDNKKHRPYMIHRALLGSIERFTGILL 528 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G IW ++P ++ +I I + +K+Y L + G D E++ + Sbjct: 529 EHYAGLLPIW---LSPTQVMIIPIADRHH---EYAKKVYEFLKENGIRAEMDLREERMNA 582 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + A+L P+ ++VG + ++ V ++ + G M L + +++ + N Sbjct: 583 KIRDAELKKIPVILVVGDREAQNNTVSVRTKKEGNLGSMELNKFLDWIKEKIKNK 637 >gi|261880625|ref|ZP_06007052.1| proline-tRNA ligase [Prevotella bergensis DSM 17361] gi|270332666|gb|EFA43452.1| proline-tRNA ligase [Prevotella bergensis DSM 17361] Length = 493 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF D K YV S+G+ + R++ A+I D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTFLNKDNKPEYVWATSWGV-STRLMGALIMVHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ +I I +++ K + + + +G V +DD ++ G +FA Sbjct: 295 VLPPKLAPIQVVIIPISRNNEQLEAISAKLKPVIDKFASLGISVKYDDSDNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++++G++ + + +EI R T +E++S + ++ Sbjct: 355 YELKGVPVRLVMGARDLENGTIEIMRRDTLEKENVSFDGIV 395 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEELIIRPTSETMIWNTYKNWIQSYRDLPILCNQWCNVMRWEMRTR-PFLRTSEFLWQEG 176 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T + ++ KM Y Sbjct: 177 HTAHATEQEAQEEARKMLKVY 197 >gi|56707928|ref|YP_169824.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670399|ref|YP_666956.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|224457008|ref|ZP_03665481.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370416|ref|ZP_04986421.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874733|ref|ZP_05247443.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|73919791|sp|Q5NGL8|SYT_FRATT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123063497|sp|Q14I20|SYT_FRAT1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56604420|emb|CAG45450.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320732|emb|CAL08833.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|151568659|gb|EDN34313.1| hypothetical protein FTBG_00181 [Francisella tularensis subsp. tularensis FSC033] gi|254840732|gb|EET19168.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159111|gb|ADA78502.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis NE061598] Length = 634 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 79/382 (20%), Positives = 146/382 (38%), Gaps = 48/382 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S GI W G + V +R N+ G E+ P + LW +SG Y + Sbjct: 255 QEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSGHASKYAEN 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N I P + ++ + + SYR+LP + + R+E G++R Sbjct: 315 MFATKSENRDFAIR-PMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLR 373 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F TPE + M ++ G ++ P IG D + Sbjct: 374 VRSFTQDDGHIF-CTPEQVEEEVILMVQQCFEVYKDFGFNDFAVKIALRPENRIGDDETW 432 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + S+ + + + N ++ ++ A Y + H L Sbjct: 433 DK-------------SEQMLKNALDANNVSYE-------LLPGEGAFYGPKIEFH---LK 469 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 D++ R + G I +S+P + AT+ +G+ V + +G++ Sbjct: 470 DAI-------GRSWQCGTI---QLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP +++++ I + D C++++ L K G D Sbjct: 520 IGMLIEHYAGNLPLW---LAPVQVAVMGISNNQD---DYCKEVFIMLEKNGIRAKLDLRN 573 Query: 386 EQIGSQFAVADLLGFPLQVIVG 407 E+IG + LL P VI+G Sbjct: 574 EKIGFKIREHTLLRVPYLVILG 595 >gi|302187613|ref|ZP_07264286.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642] Length = 640 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 91/422 (21%), Positives = 159/422 (37%), Gaps = 65/422 (15%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY-LRIFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ L ++ G K Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIKLTLDVYADFGFK 413 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISL 245 I ++ + P +G D L D E+ + + D P P E + I Sbjct: 414 DIELKLSTRPEKRVGSD------ELWDRAESALASALDSAGLPYDLQPGEGAFYGPKIEF 467 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSA 300 + L D L G ++ GT ++LP +SA Sbjct: 468 S--------------------LKDCL-------------GRVWQCGTLQLDFNLPIRLSA 494 Query: 301 TFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + + V + +G+ ++ ++G W +AP + ++NI Sbjct: 495 EYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPTQAVIMNITDKQA 551 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L++ G D E+IG + LL P +++G + V V ++ Sbjct: 552 ---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608 Query: 420 HR 421 R Sbjct: 609 TR 610 >gi|301303993|ref|ZP_07210111.1| threonyl-tRNA synthetase [Escherichia coli MS 124-1] gi|300840790|gb|EFK68550.1| threonyl-tRNA synthetase [Escherichia coli MS 124-1] Length = 429 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 43 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 102 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 103 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 161 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 162 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 218 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 219 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 257 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 258 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 307 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI D ++ +LS G V D Sbjct: 308 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---DYVNELTQKLSNAGIRVKADLR 361 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 362 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 412 >gi|158334707|ref|YP_001515879.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017] gi|158304948|gb|ABW26565.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017] Length = 606 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 8/166 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +++EQ + G + ++ P + DL+ SG + Y ++M L Sbjct: 220 GLPLWTPKGTLLRSQLEDFLKQEQIQRGYLGVTTPHIARVDLFKTSGHWQKYQEDMFPLM 279 Query: 98 DRND------KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 ND + + P + I++S ++SYR+LP + +R E G+ Sbjct: 280 SENDADRSSEQGFVMKPMNCPFHIQIYKSELRSYRDLPMRLAEFGTVYRYEQSGELGGLT 339 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R R F + D++ F +TP+ + K+ L +F +L LK+ R Sbjct: 340 RVRGFTVDDSHLF-VTPDQLDDEFLKVVDLILSVFEKLQLKNFKAR 384 >gi|224531964|ref|ZP_03672596.1| prolyl-tRNA synthetase [Borrelia valaisiana VS116] gi|224511429|gb|EEF81835.1| prolyl-tRNA synthetase [Borrelia valaisiana VS116] Length = 488 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 92/414 (22%), Positives = 165/414 (39%), Gaps = 85/414 (20%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L L E D + E + + +++ + PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYGFLEKEKDHIDGFSPEFAIIKNAGGESLMEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVIRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDVYKRF------------------------MEDYLAIPVFCGKK-------SEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG+I P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMKHVFASSWGV-STRLIGALIMVHSDEKGLILPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVG 407 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG Sbjct: 298 DEINKKILDYSDCVMQILKKAEFRVEIDKDIRSSPGFRFSSAEFKGIPIRLEVG 351 >gi|187931727|ref|YP_001891712.1| threonyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] gi|238691566|sp|B2SGS3|SYT_FRATM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|187712636|gb|ACD30933.1| threonyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] Length = 634 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 79/382 (20%), Positives = 146/382 (38%), Gaps = 48/382 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S GI W G + V +R N+ G E+ P + LW +SG Y + Sbjct: 255 QEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSGHASKYAEN 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N I P + ++ + + SYR+LP + + R+E G++R Sbjct: 315 MFATKSENRDFAIR-PMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLR 373 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F TPE + M ++ G ++ P IG D + Sbjct: 374 VRSFTQDDGHIF-CTPEQVEEEVILMVQQCFEVYKDFGFNDFAVKIALRPENRIGDDETW 432 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + S+ + + + N ++ ++ A Y + H L Sbjct: 433 DK-------------SEQMLKNALDANNVSYE-------LLPGEGAFYGPKIEFH---LK 469 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 D++ R + G I +S+P + AT+ +G+ V + +G++ Sbjct: 470 DAI-------GRSWQCGTI---QLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP +++++ I + D C++++ L K G D Sbjct: 520 IGMLIEHYAGNLPLW---LAPVQVAVMGISNNQD---DYCKEVFIMLEKNGIRAKLDLRN 573 Query: 386 EQIGSQFAVADLLGFPLQVIVG 407 E+IG + LL P VI+G Sbjct: 574 EKIGFKIREHTLLRVPYLVILG 595 >gi|298373192|ref|ZP_06983182.1| proline--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] gi|298276096|gb|EFI17647.1| proline--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] Length = 493 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 5/162 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ F D K YV S+G+ + R++ A+I + D G++ Sbjct: 237 KALQAGTSHFLGQNFAKAFDVQFVNKDNKLEYVWATSWGV-STRLMGALIMAHSDNNGLV 295 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYA---RLSKVGCDVFWDDM-GEQIGSQFAVA 395 P +AP ++ ++ I + + E+I+ RL +G V +DD ++ G +FA Sbjct: 296 LPPRLAPIQVVIVPIYKNAEQLAAVAERIHPVVDRLRSLGVSVKFDDSDNKKPGWKFAEY 355 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++ +G + + + VE+ R ++ M LE + Y Sbjct: 356 ELKGVPVRLALGGRDLENGTVEVFRRDKLEKQTMPLEGIEQY 397 Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ +++ I+SYR+LP Q R E+R R +R+ EFL Sbjct: 114 AAKLEEELIVRPTSETIIWSTYKNWIQSYRDLPILVNQWANVVRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 ++ ++ T E + KM Y R Sbjct: 173 WQEGHTAHATREEAMEEATKMLNVYADFAER 203 >gi|56460507|ref|YP_155788.1| threonyl-tRNA synthetase [Idiomarina loihiensis L2TR] gi|73919798|sp|Q5QYN4|SYT_IDILO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56179517|gb|AAV82239.1| Threonyl-tRNA synthetase [Idiomarina loihiensis L2TR] Length = 638 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 86/397 (21%), Positives = 153/397 (38%), Gaps = 50/397 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W G + IRE+ E+ P + LW +SG ++ + + Sbjct: 257 QEEAPGMVFWHHNGWTIFRELETYIREKMREYEYQEVKGPMMMDRVLWEKSGHWEKFSEL 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + N + + P + IF +KSYR+LP + R+E G+MR Sbjct: 317 MFTTSSENREYAV-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLMR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F DA+ F T + + + G ++I ++ + P +G D + Sbjct: 376 VRGFTQDDAHIF-CTEQQVQEEVAGCIKMVYETYKTFGFENIDVKLSTRPEKRLGDDATW 434 Query: 209 EFIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + ++T Q + D +DF +P E + I L Sbjct: 435 D---RSETALAQALKNND-IDFSYLPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 FD L R + G I ++LP + AT+ G D + H M I G++ Sbjct: 471 FDCL-------GRAWQCGTI---QLDFALPGRLGATYVGEDNERHTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +W ++P ++ L+NI + D K+ L++ G D Sbjct: 521 FMGILIEEYAGHFPLW---LSPTQVVLMNITDNQS---DYVRKVVKTLNEKGIRASADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG K V +V ++ R Sbjct: 575 NEKIGFKIREHTLKRVPYLLVVGDKEVEAGEVAVRTR 611 >gi|301327449|ref|ZP_07220684.1| threonyl-tRNA synthetase [Escherichia coli MS 78-1] gi|309793489|ref|ZP_07687916.1| threonyl-tRNA synthetase [Escherichia coli MS 145-7] gi|312969746|ref|ZP_07783929.1| threonyl-tRNA synthetase [Escherichia coli 1827-70] gi|300845961|gb|EFK73721.1| threonyl-tRNA synthetase [Escherichia coli MS 78-1] gi|308123076|gb|EFO60338.1| threonyl-tRNA synthetase [Escherichia coli MS 145-7] gi|310338031|gb|EFQ03120.1| threonyl-tRNA synthetase [Escherichia coli 1827-70] Length = 622 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 412 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI D ++ +LS G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---DYVNELTQKLSNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 605 >gi|309788453|ref|ZP_07683057.1| threonyl-tRNA synthetase [Shigella dysenteriae 1617] gi|308923835|gb|EFP69338.1| threonyl-tRNA synthetase [Shigella dysenteriae 1617] Length = 622 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 412 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI D ++ +LS G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---DYVNELTQKLSNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKELGSMDVNEVI 605 >gi|154253109|ref|YP_001413933.1| threonyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] gi|189083615|sp|A7HWJ3|SYT_PARL1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|154157059|gb|ABS64276.1| threonyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] Length = 652 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 87/426 (20%), Positives = 158/426 (37%), Gaps = 62/426 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + ++G W P G + + +R + G +E+ P L + W +SG + Y + Sbjct: 256 LQEEAQGSVFWHPKGWRIWQALEQYVRRRIDAAGYVEVRTPQLLDSKFWEQSGHWGKYRE 315 Query: 92 EMLRLADR-------------NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 M + D K M P + IF+ +KSYR+LP + Sbjct: 316 NMFVVPDEVPSTDEDAPVLSGKAKLMAIKPMNCPAHIQIFKQGVKSYRDLPLRMAEFGCC 375 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMR 196 R+E G+MR R+ DA+ F E + FV+ L ++ +G +R Sbjct: 376 HRNEPHGALHGLMRVRQMTQDDAHIF--CTEDQIKEETEAFVALLESVYEDMGFTGTKLR 433 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 + P V A T ET K ++ + + +FD A Y Sbjct: 434 LATRP---------DVRAGTDETWDKAEK-ALEEALKALGKEFD-------FAPGEGAFY 476 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY 311 + H L D+ +G + GT + LP + A++ G DG H Sbjct: 477 GPKLEFH---LRDA-------------IGRSWQLGTLQLDFVLPERLDASYIGEDGNKHR 520 Query: 312 VQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 M I G++ ++ +++G+ +W +AP + + I + E++ Sbjct: 521 PVMLHRAILGSLERFIGILIENYEGRFPMW---LAPVQAVVTTITSD---ADPYAEEMLQ 574 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G D E+I + + P + G + + V I+ + ++ M Sbjct: 575 KLRDAGIRAELDLRNEKINYKVREHSVAKVPAIFVAGKREAEEGTVSIRRLGSQQQQTMK 634 Query: 431 LEEVIN 436 L+E I Sbjct: 635 LDEAIK 640 >gi|66045402|ref|YP_235243.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a] gi|75502334|sp|Q4ZUG7|SYT_PSEU2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|63256109|gb|AAY37205.1| Threonyl-tRNA synthetase, class IIa [Pseudomonas syringae pv. syringae B728a] Length = 640 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 91/422 (21%), Positives = 159/422 (37%), Gaps = 65/422 (15%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY-LRIFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ L ++ G K Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIKLTLDVYADFGFK 413 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISL 245 I ++ + P +G D L D E+ + + D P P E + I Sbjct: 414 DIELKLSTRPEKRVGSD------ELWDRAESALASALDSAGLPYDLQPGEGAFYGPKIEF 467 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSA 300 + L D L G ++ GT ++LP +SA Sbjct: 468 S--------------------LKDCL-------------GRVWQCGTLQLDFNLPIRLSA 494 Query: 301 TFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + + V + +G+ ++ ++G W +AP + ++NI Sbjct: 495 EYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPTQAVIMNITDKQA 551 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L++ G D E+IG + LL P +++G + V V ++ Sbjct: 552 ---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608 Query: 420 HR 421 R Sbjct: 609 TR 610 >gi|99081562|ref|YP_613716.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ruegeria sp. TM1040] gi|123077585|sp|Q1GFW2|SYT_SILST RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|99037842|gb|ABF64454.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ruegeria sp. TM1040] Length = 648 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 85/403 (21%), Positives = 153/403 (37%), Gaps = 58/403 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + + +R Q+R G +E++ P + LW +SG +D Y + Sbjct: 260 MQEEAPGQVFWHPNGWRIYTTLQDYMRRMQDRDGYVEVNTPQVVDRKLWEKSGHWDKYQE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + D A P + +F +KSYR+LP + R E Sbjct: 320 NMFIVEVDEDHAREKAVNALKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCARYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP--- 201 G+MR R F D + F E S F+++L +++ LG + ++ + P Sbjct: 380 LHGIMRVRGFTQDDGHIF--CTEDQITSETAKFIAFLSKVYADLGFDNWTIKLSTRPEQR 437 Query: 202 IGGDLSHEFI--VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 IG D + + + L D C D+ I+E A Y Sbjct: 438 IGSDETWDNMEQALGDA------CKAAGYDY----------------EILEGEGAFYGPK 475 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGS 316 + L D++ N + ++ +LP + A+F G DG H V + Sbjct: 476 LEF---TLTDAIGRNWQCGTLQVDA----------NLPERLEASFIGQDGSKHRPVMLHR 522 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 +G+ ++ H GK W +AP ++ + +I + D ++ L G Sbjct: 523 ATLGSFERFIGILIEEHAGKLPFW---LAPRQVVVASITSE---ADDYVNEVVETLRAAG 576 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + + P+ + VG + V + V ++ Sbjct: 577 VRAEADTRNEKINYKVREHSVGKVPVILAVGHREVEERTVSVR 619 >gi|156086662|ref|XP_001610740.1| threonyl-tRNA synthetase [Babesia bovis T2Bo] gi|154797993|gb|EDO07172.1| threonyl-tRNA synthetase, putative [Babesia bovis] Length = 736 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 13/160 (8%) Query: 17 DAEIASHKLMLRT-GMIH---QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 DA+ H+L+ T + H HS G WLP G K + + +RE G E+ P Sbjct: 320 DAKANDHRLLGTTLNLFHFDNIHSPGSCFWLPNGAKIYNRLVDFMRENYRLRGYQEVITP 379 Query: 73 TLQSADLWVESGRYDSYGKEM-LRLADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLP 129 + S +LW SG YD+Y + M + D + M + P H +F+ SYR LP Sbjct: 380 NIYSCELWKTSGHYDNYKENMYMFTVDEAEWGMKGMNCPGH----CLMFKHMNPSYRQLP 435 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 F + R+EL G+ R R F DA+ F TPE Sbjct: 436 LRFADFGVLHRNELTGSLSGLTRVRRFQQDDAHIF-CTPE 474 >gi|82777067|ref|YP_403416.1| threonyl-tRNA synthetase [Shigella dysenteriae Sd197] gi|123755748|sp|Q32FI0|SYT_SHIDS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81241215|gb|ABB61925.1| threonine tRNA synthetase [Shigella dysenteriae Sd197] Length = 642 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI D ++ +LS G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---DYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKELGSMDVNEVI 625 >gi|78189671|ref|YP_380009.1| threonyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] gi|123729828|sp|Q3APV9|SYT_CHLCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78171870|gb|ABB28966.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] Length = 657 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 90/423 (21%), Positives = 167/423 (39%), Gaps = 52/423 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + + +REEQ + G + + P + + +L+ SG Y Y L Sbjct: 273 GLPMWLPKGAIIRSELESFLREEQRKRGYVPVYTPHIGNIELYKRSGHYPYYSDSQFPPL 332 Query: 95 RLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D + K Y P + I+ S ++SYR+LP F + +R E G+ R Sbjct: 333 TYHDEDGKQEQYLLKPMNCPHHHLIYSSKMRSYRDLPLRFTEFGTVYRHEQSGELNGLAR 392 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS-HEF 210 +R F D++ + + + + ++ +F LG + R LS H+ Sbjct: 393 ARGFTQDDSHIYCRPDQLVDEICSAIELTQF-VFKTLGFAEVQTR---------LSLHDP 442 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A G T + D +E D I + + + K+ D Sbjct: 443 ANQAKYGGTAEVWEQAEKDVQEAAERMGVDYFIGIGE------------ASFYGPKI-DF 489 Query: 271 LPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAM-R 323 + + +G + GT Y +P T+ G+DG+ H V + G+M R Sbjct: 490 IVRDA--------IGRKWQLGTVQVDYVMPERFDLTYVGSDGQKHRPVVIHRAPFGSMER 541 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE + G +W +AP +++++ I + D +Y RL G D Sbjct: 542 FIGLLIEHT-AGNFPLW---LAPVQVAVLPIAEENH---DYATTVYRRLLAAGIRAELDT 594 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E+I + A++ P +++G K ++ +V ++ G + +E+I + Sbjct: 595 RSEKINRKIRDAEMSKTPCMLVIGQKEQANGEVSLRRHRQGDAGRFATDELIETLKQEIA 654 Query: 444 NNR 446 N + Sbjct: 655 NRQ 657 >gi|306821412|ref|ZP_07455017.1| proline--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550534|gb|EFM38520.1| proline--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 482 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 79/157 (50%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G G ++ T++ DGK S+G+ + R++ A+I D +G+ Sbjct: 227 GKALQSGTSHNLGQHFTKAFDITYQSRDGKLENPYHTSWGV-STRLIGAIIMVHGDNRGL 285 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV-FWDDMGEQIGSQFAVADL 397 + P +AP ++ +I I+ + D +IY+ L +G V DD G +F ++ Sbjct: 286 VLPPEIAPIQVVIIPIQQQKEGVLDKANEIYSSLKNLGIRVELDDDSKNSTGWKFNEYEM 345 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ +G + + ++ V I R T ++ +S++++ Sbjct: 346 KGVPLRIEIGPRDIQNNIVSISRRDTLEKDQISIDDI 382 >gi|313679172|ref|YP_004056911.1| prolyl-tRNA synthetase [Oceanithermus profundus DSM 14977] gi|313151887|gb|ADR35738.1| prolyl-tRNA synthetase [Oceanithermus profundus DSM 14977] Length = 478 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 4/169 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF+ D ++ YV S+G+ + R++ A+I + D +G+ Sbjct: 221 GKALQAGTSHFLGQNFARAFEITFQDQDLEEKYVWTTSWGL-STRMIGAIIMAHGDDQGL 279 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVA 395 I P +AP ++ ++ I K +V +A ++ + G V DD + G +F Sbjct: 280 ILPPRLAPIQVVVVPIYRKNTREVVLEAARELVREIRAAGVRVHLDDRDQYSPGYKFNEW 339 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +L G PL++ +G + V +K RL G +E + L ++ R Sbjct: 340 ELKGVPLRIEIGPRDVEAGHAVLKSRLGGEKEFIGLRDLPGLLPERLEG 388 >gi|300904575|ref|ZP_07122412.1| threonyl-tRNA synthetase [Escherichia coli MS 84-1] gi|300403488|gb|EFJ87026.1| threonyl-tRNA synthetase [Escherichia coli MS 84-1] gi|315257476|gb|EFU37444.1| threonyl-tRNA synthetase [Escherichia coli MS 85-1] Length = 622 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 412 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI D ++ +LS G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---DYVNELTQKLSNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 605 >gi|307310711|ref|ZP_07590357.1| threonyl-tRNA synthetase [Escherichia coli W] gi|331647210|ref|ZP_08348304.1| threonine--tRNA ligase [Escherichia coli M605] gi|331673269|ref|ZP_08374037.1| threonine--tRNA ligase [Escherichia coli TA280] gi|281178789|dbj|BAI55119.1| threonyl-tRNA synthetase [Escherichia coli SE15] gi|306908889|gb|EFN39385.1| threonyl-tRNA synthetase [Escherichia coli W] gi|315061024|gb|ADT75351.1| threonyl-tRNA synthetase [Escherichia coli W] gi|315299748|gb|EFU58988.1| threonyl-tRNA synthetase [Escherichia coli MS 16-3] gi|323378405|gb|ADX50673.1| threonyl-tRNA synthetase [Escherichia coli KO11] gi|330911523|gb|EGH40033.1| threonyl-tRNA synthetase [Escherichia coli AA86] gi|331043993|gb|EGI16129.1| threonine--tRNA ligase [Escherichia coli M605] gi|331069467|gb|EGI40854.1| threonine--tRNA ligase [Escherichia coli TA280] gi|332343438|gb|AEE56772.1| threonyl-tRNA synthetase ThrS [Escherichia coli UMNK88] Length = 642 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI D ++ +LS G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---DYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 625 >gi|157158126|ref|YP_001463015.1| threonyl-tRNA synthetase [Escherichia coli E24377A] gi|157161181|ref|YP_001458499.1| threonyl-tRNA synthetase [Escherichia coli HS] gi|170019932|ref|YP_001724886.1| threonyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|193068904|ref|ZP_03049863.1| threonyl-tRNA synthetase [Escherichia coli E110019] gi|209919078|ref|YP_002293162.1| threonyl-tRNA synthetase [Escherichia coli SE11] gi|218695280|ref|YP_002402947.1| threonyl-tRNA synthetase [Escherichia coli 55989] gi|256018088|ref|ZP_05431953.1| threonyl-tRNA synthetase [Shigella sp. D9] gi|332279130|ref|ZP_08391543.1| threonyl-tRNA synthetase [Shigella sp. D9] gi|166987321|sp|A7ZMI6|SYT_ECO24 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166987322|sp|A8A0R2|SYT_ECOHS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083607|sp|B1IPK9|SYT_ECOLC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238065113|sp|B6IBD7|SYT_ECOSE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783522|sp|B7L6J2|SYT_ECO55 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157066861|gb|ABV06116.1| threonyl-tRNA synthetase [Escherichia coli HS] gi|157080156|gb|ABV19864.1| threonyl-tRNA synthetase [Escherichia coli E24377A] gi|169754860|gb|ACA77559.1| threonyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|192957699|gb|EDV88143.1| threonyl-tRNA synthetase [Escherichia coli E110019] gi|209912337|dbj|BAG77411.1| threonyl-tRNA synthase [Escherichia coli SE11] gi|218352012|emb|CAU97745.1| threonyl-tRNA synthetase [Escherichia coli 55989] gi|320197902|gb|EFW72510.1| Threonyl-tRNA synthetase [Escherichia coli EC4100B] gi|323948091|gb|EGB44082.1| threonyl-tRNA synthetase [Escherichia coli H120] gi|324016472|gb|EGB85691.1| threonyl-tRNA synthetase [Escherichia coli MS 117-3] gi|332101482|gb|EGJ04828.1| threonyl-tRNA synthetase [Shigella sp. D9] Length = 642 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI D ++ +LS G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---DYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 625 >gi|71735831|ref|YP_274354.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|123747652|sp|Q48JS3|SYT_PSE14 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71556384|gb|AAZ35595.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 640 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 91/422 (21%), Positives = 159/422 (37%), Gaps = 65/422 (15%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY-LRIFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ L ++ G K Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIKLTLDVYADFGFK 413 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISL 245 I ++ + P +G D L + ET + + D P P E + I Sbjct: 414 DIELKLSTRPEKRVGSD------ELWERAETALASALDSAGLPYDLQPGEGAFYGPKIEF 467 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSA 300 + L D L G ++ GT ++LP +SA Sbjct: 468 S--------------------LKDCL-------------GRVWQCGTLQLDFNLPIRLSA 494 Query: 301 TFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + + V + +G+ ++ ++G W +AP + ++NI Sbjct: 495 EYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAW---LAPTQAVIMNITDKQA 551 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L++ G D E+IG + LL P +++G + V V ++ Sbjct: 552 ---DFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608 Query: 420 HR 421 R Sbjct: 609 TR 610 >gi|291279885|ref|YP_003496720.1| threonyl-tRNA synthetase [Deferribacter desulfuricans SSM1] gi|290754587|dbj|BAI80964.1| threonyl-tRNA synthetase [Deferribacter desulfuricans SSM1] Length = 640 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 89/406 (21%), Positives = 160/406 (39%), Gaps = 47/406 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + A +EE + G + P + + LW SG Y + M Sbjct: 260 GLICWFPKGARIRSIIEAFWKEEHFKNGYEMLYTPHIGKSTLWETSGHLAFYQENMYSPM 319 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + P + I++S ++SYR+LP + ++ +R E G++R R F Sbjct: 320 DIDGNEYFIKPMNCPFHIMIYKSKVRSYRDLPLRWAELGTVYRYERSGVLHGLLRVRGFT 379 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ T E ++ LR++ G +SI + P +G D E Sbjct: 380 QDDAHII-CTQEQIIDEIKEVLNFSLRMWKAFGFESIKGYIATRPEKSVGDDAMWEKATQ 438 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + G I DF+ I E A Y D+ K+ D++ Sbjct: 439 SLEG-------------AIKDSGIDFE-------IDEGGGAFYGPKIDL---KIKDAIGR 475 Query: 274 NKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIE 330 +++ + ++LP T+ DGK+ M +G++ V+ Sbjct: 476 EWQMTTIQFD----------FNLPERFDMTYIDKDGKEKRPFMVHRALLGSLERFFGVLI 525 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G IW +AP ++ +IN+ + C++I +L + G V +D E+IG Sbjct: 526 EHYAGAFPIW---LAPIQVRIINVS---DAQYEYCKEIEKKLKEEGIRVEFDSRNEKIGY 579 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + A L P +I+G+ V V ++ R + ++ E I+ Sbjct: 580 KIREAQLQKIPHMIIIGNNEVEAKTVSVRLRNGENKNNLDFYEYIS 625 >gi|260893515|ref|YP_003239612.1| threonyl-tRNA synthetase [Ammonifex degensii KC4] gi|260865656|gb|ACX52762.1| threonyl-tRNA synthetase [Ammonifex degensii KC4] Length = 637 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 93/393 (23%), Positives = 152/393 (38%), Gaps = 58/393 (14%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA 103 P G + + A+ R E R G E+ P L +LW SG +D Y KE + + + + Sbjct: 267 PKGMIVRNELEALWRREHYRRGYQEIRTPILLKRELWERSGHWDHY-KENMYFLEIDGQP 325 Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYS 162 P + I++ + SYR LP ++ L R EL G+MR R F DA+ Sbjct: 326 YAVKPMNCPGAILIYQQRVHSYRELPLRLAEMGLVHRHELSGVLHGLMRVRSFTQDDAHI 385 Query: 163 F---DLTPEGSKHSYNKMFVSYLRIF---HRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 F D E + + Y ++F + + L + P ++ +G D E LA + Sbjct: 386 FCREDQVKEEILGIIDLVDYFYRQVFGFPYHVELSTRPEKS----MGDDHIWE---LATS 438 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + + F I E A Y D H E D L Sbjct: 439 ALKEALEERGFA-----------------YKINEGEGAFYGPKIDFHLE---DCL----- 473 Query: 277 VSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESS 332 R + G I F K+ L + G DG+ H V + G++ A++ Sbjct: 474 --GRTWQCGTIQLDFLMPEKFDL----FYIGEDGQRHRPVMLHRVIFGSLERFMAILIEH 527 Query: 333 HDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G +W +AP ++ ++ I H R +IY LS+ V D E++ + Sbjct: 528 FAGAFPLW---LAPVQVRILPITDRHHAYAR----QIYELLSRADLRVELDARNEKVSYK 580 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 A + P +++G K ++ V ++HR G Sbjct: 581 VREAQVQKIPYMLVIGDKEMNSGTVAVRHRSRG 613 >gi|196034766|ref|ZP_03102174.1| prolyl-tRNA synthetase [Bacillus cereus W] gi|195992809|gb|EDX56769.1| prolyl-tRNA synthetase [Bacillus cereus W] Length = 476 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|116620962|ref|YP_823118.1| prolyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] gi|122255000|sp|Q027I0|SYP_SOLUE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116224124|gb|ABJ82833.1| prolyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] Length = 480 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/327 (20%), Positives = 132/327 (40%), Gaps = 62/327 (18%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ F I SYR+LP + Q R ELR R +R+ EFL ++ ++ Sbjct: 110 PTSETIIGHFFSKWIHSYRDLPLLYNQWANVIRWELRTRM-FLRTTEFLWQEGHT----- 163 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + ++ + LRI DL + ++D Sbjct: 164 --AHSNHEEAVEEVLRIL-------------------DLYAQ-------------VAEDI 189 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 M P+ I + + E++ + S +++ +N ++ G Sbjct: 190 MAMPV---------IKGVKTHAEKFAGALKSYS-------IEAMMQN----GLALQAGTS 229 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 G + F+ +G+ YV S+G+ + R++ +I + D KG++ P +AP Sbjct: 230 HDLGQNFGKAFDVQFQSKEGQLEYVWQTSWGV-STRLIGGLIMTHSDDKGLVLPPKLAPV 288 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 K ++ I ++ E + ++G V D G+ G++F + G P+ + +G Sbjct: 289 KSVIVPIYRKEEERAAVLEAAHRIAKEIGAKVD-DREGQSPGAKFFHWERRGVPVVLELG 347 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEV 434 + ++ K+ +K R TG +E + EV Sbjct: 348 PRDLASGKIVLKRRDTGTKEPIDQSEV 374 >gi|167629857|ref|YP_001680356.1| threonyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] gi|167592597|gb|ABZ84345.1| threonyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] Length = 641 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 97/429 (22%), Positives = 170/429 (39%), Gaps = 61/429 (14%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD +L L T I + G + P G + + REE R G E+ P + Sbjct: 244 RDHRRIGQELELYT--ILEEGPGFPFFFPKGMIIRNELENFWREEHARAGYREVRTPIIL 301 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + LW SG + +Y +E + + +++ P + +++ I SYR+LP ++ Sbjct: 302 NRSLWERSGHWANY-RENMYVTQIDEEDYCVKPMNCPGGMLVYKQAIHSYRDLPLRMGEL 360 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-------GSKHSYNKMFVSYLRIFHR 187 L R E+ G+MR R F DA+ F +TP G ++M+ ++ +H Sbjct: 361 GLVHRHEISGALHGLMRVRCFTQDDAHIF-MTPGQIKDEIIGVIELIDRMYKTFGFAYH- 418 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 + L + P +A +G D E LA + +K MD+ I + F Sbjct: 419 VELSTKPEKA----MGSD---EIWELATNSLEEALKAKG-MDYKINPGDGAF-------- 462 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKG 304 Y D H L D + R + G I F ++ L T+ G Sbjct: 463 --------YGPKIDFH---LKDCI-------GRTWQCGTIQLDFQMPERFDL----TYVG 500 Query: 305 ADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H V + G++ ++ + G +P +AP + ++ I + Sbjct: 501 EDGQKHRPVMIHRVVFGSIERFIGILTEHYAGA---FPTWLAPVQARVLPITDRHH---E 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+K G V D E+IG + + P ++VG K + V ++ R Sbjct: 555 YAASVRSALAKQGVRVEVDGRNEKIGYKIREGQVQKIPYLLVVGDKEAENGAVAVRKRGE 614 Query: 424 GIREDMSLE 432 G + M+L+ Sbjct: 615 GDKGAMALD 623 >gi|228944201|ref|ZP_04106580.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228815590|gb|EEM61832.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 476 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKELISMDQL 376 >gi|228931896|ref|ZP_04094792.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827876|gb|EEM73614.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 476 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|86137404|ref|ZP_01055981.1| threonyl-tRNA synthetase [Roseobacter sp. MED193] gi|85825739|gb|EAQ45937.1| threonyl-tRNA synthetase [Roseobacter sp. MED193] Length = 648 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 85/403 (21%), Positives = 149/403 (36%), Gaps = 58/403 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G K + +R Q R G +E++ P + LW SG +D Y + Sbjct: 260 MQEEAPGQVFWHPNGWKIYTTLQDYMRRMQERDGYVEVNTPQVVDRKLWEASGHWDKYQE 319 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + +F +KSYR+LP + R E Sbjct: 320 NMFIVEVDEEHAREKAVNALKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCARYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP--- 201 G+MR R F D + F E S F+++L +++ LG + ++ + P Sbjct: 380 LHGIMRVRGFTQDDGHIF--CAEDQIESETAKFIAFLSKVYADLGFHNWTIKLSTRPEKR 437 Query: 202 IGGDLSHEFI--VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 IG D S + + L D C ++ ++E A Y Sbjct: 438 IGSDESWDLVEKALGDA------CKAAGYEY----------------ELLEGEGAFYGPK 475 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGS 316 + L D++ N + ++ +LP + A F GADG H + Sbjct: 476 LEF---TLTDAIGRNWQCGTLQVDP----------NLPERLEANFIGADGNKHRPFMLHR 522 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 +G+ ++ H GK W +AP ++ + +I + D ++ L G Sbjct: 523 ATLGSFERFIGILIEEHAGKLPFW---LAPRQVVVASITSD---ADDYVHEVVTELQAAG 576 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + L P+ + +G + V + V I+ Sbjct: 577 VRAEADIRNEKINYKVREHSLGKVPVILAIGHREVEERTVSIR 619 >gi|300924761|ref|ZP_07140703.1| threonyl-tRNA synthetase [Escherichia coli MS 182-1] gi|300419049|gb|EFK02360.1| threonyl-tRNA synthetase [Escherichia coli MS 182-1] Length = 642 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI D ++ +LS G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---DYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVQSGKVAVRTRRGKDLGSMDVNEVI 625 >gi|264679166|ref|YP_003279073.1| threonyl-tRNA synthetase [Comamonas testosteroni CNB-2] gi|262209679|gb|ACY33777.1| threonyl-tRNA synthetase [Comamonas testosteroni CNB-2] Length = 687 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 90/389 (23%), Positives = 143/389 (36%), Gaps = 52/389 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I +HS G W P G V +R G E+ P + LW ++G +D Y + Sbjct: 303 IDEHSPGTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQILDKGLWEKTGHWDKYRE 362 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M D + P + IF+ IKSYR+LP F + R+E G+M Sbjct: 363 NMF-TTDSEKREYALKPMNCPGHIIIFKQGIKSYRDLPLRFGEFGNCHRNEPTGSLHGIM 421 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGDL 206 R R F D + F E + F S L +++ G +I R + P IG D Sbjct: 422 RVRAFTQDDGHIF--CTEDQIQAEVTAFTSLLQKVYADFGFTNILYRLSTRPEKRIGTDE 479 Query: 207 SHEFI--VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 + + LA+ G C +++ P E + I Sbjct: 480 AWDKAENALAE-GLRASGCEFEYL----PGEGAFYGPKIEYT------------------ 516 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 L D+L R + G I ++P + A F G DG+ H M I G+ Sbjct: 517 --LKDAL-------GREWQCGTI---QVDPNMPERLDAEFVGEDGERHRPIMLHRAILGS 564 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVF 380 + ++ H G W +AP + +++NI A ++ +K+ L V Sbjct: 565 LERFIGILVEHHSGALPAW---LAPVQAAVLNITDAQADYAQEVAQKLQKALPNQSLRVV 621 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 D E+I + + P ++ G K Sbjct: 622 TDLRNEKITYKIREHSMQKLPYILVAGDK 650 >gi|219685452|ref|ZP_03540270.1| proline--tRNA ligase [Borrelia garinii Far04] gi|219673008|gb|EED30029.1| proline--tRNA ligase [Borrelia garinii Far04] Length = 488 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 96/428 (22%), Positives = 170/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 TG P L L E + + E + + +++ I PT E ++ +++ Sbjct: 59 TGHENAYFPMLIPYGFLEKEKDHIEGFSPEFAIIKEAGGESLAEPLILRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDLYKRF------------------------MEDYLAIPVFCGKK-------SEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG+I P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMVHSDEKGLILPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVNALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRIEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTIVRR 365 >gi|323486231|ref|ZP_08091559.1| hypothetical protein HMPREF9474_03310 [Clostridium symbiosum WAL-14163] gi|323400449|gb|EGA92819.1| hypothetical protein HMPREF9474_03310 [Clostridium symbiosum WAL-14163] Length = 483 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/333 (21%), Positives = 133/333 (39%), Gaps = 67/333 (20%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAY 161 M PT E + D + I+SYR+LP + Q +++ RP +RSREFL ++ + Sbjct: 116 MCVRPTSETLFCDFYARDIQSYRDLPRLYNQWCSVVRWEKTTRP---FLRSREFLWQEGH 172 Query: 162 SFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 + T E ++ M Y AD Sbjct: 173 TAHATAEQAEERTELMLNLY--------------------------------AD------ 194 Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARG 281 FC + + + TD + A Y + +H+ K S Sbjct: 195 FCEEVLAMPVVRGKKTDKEKFAGAE-------ATYTIEALMHDGKALQS----------- 236 Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 G FG ++ + D + YV S+G+ R++ A+I D G++ P Sbjct: 237 ---GTSHNFGDGFAKAFEIQYLDKDNQLKYVHQTSWGM-TTRLIGAIIMVHGDDNGLVLP 292 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +AP ++ ++ I+ + + D ++ LS G V DD + G +F+ +++ G P Sbjct: 293 PRIAPVQVMIVPIQQNKEGVLDKAYELKEVLS--GFKVKVDDSDKSPGWKFSESEMRGIP 350 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 ++V +G + +++++ + R T + +SL+E+ Sbjct: 351 VRVEIGPRDLAENQAVLVRRDTHEKITVSLDEI 383 >gi|229194773|ref|ZP_04321562.1| Prolyl-tRNA synthetase 2 [Bacillus cereus m1293] gi|228588716|gb|EEK46745.1| Prolyl-tRNA synthetase 2 [Bacillus cereus m1293] Length = 502 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 82/410 (20%), Positives = 159/410 (38%), Gaps = 81/410 (19%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEML- 94 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 62 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 121 Query: 95 -------RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRP 145 +LA+R + PT E + + F ++SY +LP + Q +++ RP Sbjct: 122 VTHGGNEKLAER----LCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP 177 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 +R+ EFL ++ ++ T E S+ + Y Sbjct: 178 ---FLRTTEFLWQEGHTIHETAEESQAETLNILNLYAS---------------------- 212 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 FC +D++ P I + T+ + A Y S +H+ Sbjct: 213 ----------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD 248 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 + ++ G FGT +S F GK YV S+G+ + R+ Sbjct: 249 --------------GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQYVHQTSWGV-STRM 293 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 + +I D G++ P VAP ++ ++ I H + ++ + KV V D Sbjct: 294 IGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKALELQGHIQKVA-RVKIDAS 352 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 353 NKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 402 >gi|160941555|ref|ZP_02088887.1| hypothetical protein CLOBOL_06453 [Clostridium bolteae ATCC BAA-613] gi|158435520|gb|EDP13287.1| hypothetical protein CLOBOL_06453 [Clostridium bolteae ATCC BAA-613] Length = 479 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 1/156 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ F D YV S+G+ + R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFDIQFTDKDNTLKYVHQTSWGV-STRIIGAIIMVHGDDNGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP +I ++ ++ + D ++ RL+K G V DD + G +FA ++ Sbjct: 284 VLPPRIAPVQIMVVPVQQQKEGVLDKAYELKERLTKAGYAVKVDDTDKSPGWKFADCEMR 343 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL+V +G K + ++ + R + +SL+E+ Sbjct: 344 GVPLRVEIGPKDIEKNQAVLVRRDNHEKSFVSLDEL 379 >gi|324324493|gb|ADY19753.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 476 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|315648987|ref|ZP_07902081.1| threonyl-tRNA synthetase [Paenibacillus vortex V453] gi|315275668|gb|EFU39022.1| threonyl-tRNA synthetase [Paenibacillus vortex V453] Length = 645 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 83/412 (20%), Positives = 167/412 (40%), Gaps = 53/412 (12%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ WLP G K + I + + R G + P L + +L+ SG ++ Y ++M Sbjct: 263 GQGLPIWLPNGAKLRRTLERYIVDMEERLGYQHVYTPVLGNVELYKTSGHWEHYQEDMFP 322 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + +++ ++ P + +++S + SYR+LP ++ ++ R E+ G+ R R Sbjct: 323 KMEMDNEELVLRPMNCPHHMMVYKSDMHSYRDLPIRIAELGMQHRYEMSGALTGLHRVRA 382 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + D++ F P+ K + ++ + ++ G+ R LS+ Sbjct: 383 MTLNDSHIF-CRPDQIKEEFARVIQLIMTVYKDFGIHDYRFR---------LSYR----- 427 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP----------YAATSDVHN 264 D +T+ + D M + + L +VE P Y DV Sbjct: 428 DPQDTEKYFQNDEM-WEMSQR--------MLREVVESLDMPFYEAEGEAAFYGPKLDV-- 476 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMR 323 ++ +L + + +S ++ F ++ L + G DG+ H + GI G M Sbjct: 477 -QIRTALGKEETLSTVQLD----FLLPERFEL----EYVGDDGQKHRPVVIHRGILGTME 527 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 A + + G +W ++P ++ +I + D +++ +L G V D Sbjct: 528 RFTAFLLENFAGALPLW---LSPVQVKVIPV---SNAFEDYAKEVAEKLQFAGISVEPDL 581 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++G + A L P IVG + V ++ R G SL+++I Sbjct: 582 RNEKLGYKIREAQLEKIPYMFIVGENEKNAGAVSVRKRGEGDIGAQSLDDII 633 >gi|51978320|gb|AAU19870.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus cereus E33L] Length = 502 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 62 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 121 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 122 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 178 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 179 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 212 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 213 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 248 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F GK YV S+G+ + R++ + Sbjct: 249 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQYVHQTSWGV-STRMIGGL 297 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 298 IMVHGDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKVA-RVKIDASNKTP 356 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 357 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 402 >gi|148988673|ref|ZP_01820106.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|147925874|gb|EDK76949.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] Length = 600 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 84/374 (22%), Positives = 149/374 (39%), Gaps = 48/374 (12%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I ++ +G + P L S +L+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + + P + +F+ H+ SYR LP +I + R E Sbjct: 314 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D + F +TPE + + + + ++ L R Sbjct: 374 GLQRVREMSLNDGHLF-VTPEQIQEEFQRALQLIIDVYEDFNLTDYRFR----------- 421 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI------VEQWTAPYAATSD 261 + L D +T + D M EN +L+ + E A Y D Sbjct: 422 ---LSLRDPQDTHKYFDNDEM-----WENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLD 473 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IG 320 + ++ +L + + +S ++ F ++ L + GADG+DH M G I Sbjct: 474 I---QIKTALGKEETLSTIQLD----FLLPERFDL----KYIGADGEDHRPVMIHRGVIS 522 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 M A++ ++ G W +AP +++LI + V D ++ +L G Sbjct: 523 TMERFTAILIENYKGAFPTW---LAPHQVTLIPVSNEKHV--DYAWEVAKKLRDRGVRAD 577 Query: 381 WDDMGEQIGSQFAV 394 D+ E++ QF + Sbjct: 578 VDERNEKM--QFKI 589 >gi|224826514|ref|ZP_03699615.1| threonyl-tRNA synthetase [Lutiella nitroferrum 2002] gi|224601115|gb|EEG07297.1| threonyl-tRNA synthetase [Lutiella nitroferrum 2002] Length = 632 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 82/401 (20%), Positives = 159/401 (39%), Gaps = 56/401 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +V +R G E+ P + LW +SG +++Y + Sbjct: 255 LQDEAPGMVFWHPKGWQLWQSVEQYMRATLAEAGYQEIRTPMVMDRILWEKSGHWENYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAVKPMNCPGH----VQVFNQGLRSYRDLPLRYAEFGACHRNEPSGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ DA+ F + ++N++ +R++ + G ++ ++ P Sbjct: 371 GIMRVRGFVQDDAHIFCTEEQIIDEAKAFNEL---TMRVYRQFGFDNVSVKLSLRPEKYS 427 Query: 206 LSHEFIVLADTGETQVF--CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 + E A+ G + C ++ + P A Y + H Sbjct: 428 GTLEAWDRAENGLREALRACGIEWEELPGEG-------------------AFYGPKIEYH 468 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + D+L R + G + Y LP + A + D + V + +G Sbjct: 469 ---IKDAL-------GRSWQCGTL---QLDYVLPERLGAEYVAEDNSRKRPVMLHRAILG 515 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ +H G +W +AP ++ ++NI + D + L K G V Sbjct: 516 SLERFLGILIENHAGAFPLW---LAPVQMVVMNIT---EAQADYAASVVQTLKKQGFRVE 569 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+I + L P Q+IVG K +D + ++ R Sbjct: 570 LDLRNEKISYKIREHSLQKLPYQIIVGDKEKADGLIAVRAR 610 >gi|118444060|ref|YP_877833.1| threonyl-tRNA synthetase [Clostridium novyi NT] gi|166223336|sp|A0PZN1|SYT_CLONN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118134516|gb|ABK61560.1| threonyl-tRNA synthetase [Clostridium novyi NT] Length = 637 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 93/412 (22%), Positives = 165/412 (40%), Gaps = 51/412 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G + P G + + RE + G E+ P + + LW +SG +D Y + Sbjct: 255 LKEEGPGFPFFYPKGMILRNTLENYWREMHEKAGYGEIRTPIILNEKLWHQSGHWDHYKE 314 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + +++S + SYR LP ++ L R E G+ Sbjct: 315 NMYFTKIDGEDYAI--KPMNCPGSILVYKSDLHSYRELPIRLGELGLVHRHEYSGALHGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYN--KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 MR R F DA+ F + + KM ++ +F + R E +G D Sbjct: 373 MRVRNFTQDDAHIFMTKEQITSEILGVIKMIDNFYSLFGFEYFVELSTRPEDS-MGSDED 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A T ++ +++ I + F Y D H L Sbjct: 432 WE----AATNGLIKALNEAGLEYKINEGDGAF----------------YGPKIDFH---L 468 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMR 323 D L R + G I F ++ L ++ GADG+ H M I G++ Sbjct: 469 RDCL-------GRTWQCGTIQLDFQMPERFDL----SYVGADGEKHRPVMAHRVIFGSIE 517 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++NI +QV + C++I L++ G V D Sbjct: 518 RFIGILTEHYAGA---FPTWLAPVQVKIMNI-TDNQV--EYCKEIQKVLNENGIRVELDL 571 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + A L P +++G K +++ + ++ R G M+L + + Sbjct: 572 RNEKIGYKIREAQLQKIPYMLVLGDKEMNEKTIAVRARKQGDLGAMNLTDFV 623 >gi|320529200|ref|ZP_08030292.1| threonyl-tRNA synthetase [Selenomonas artemidis F0399] gi|320138830|gb|EFW30720.1| threonyl-tRNA synthetase [Selenomonas artemidis F0399] Length = 639 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 96/424 (22%), Positives = 160/424 (37%), Gaps = 51/424 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H+ G + P G + + RE R G E+S P + S LW SG + Y + Sbjct: 257 LHEEGPGFPFFHPNGMILRNELLNYWREVHRRYGYSEISTPVILSRKLWETSGHWFHYRE 316 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + ++RS + SYR+LP ++ L R EL G+ Sbjct: 317 NMYTTQIDEEDYAI--KPMNCPGCMLVYRSQLHSYRDLPLRLAELGLVHRHELSGALHGL 374 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 R R F DA+ F +TPE + + ++ GL S + P S E Sbjct: 375 FRVRNFTQDDAHLF-VTPEQIEGEIQHTIDLFDEVYRTFGL-SYKAELSTRPDDSMGSDE 432 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 LA +G + EN D I++ E A Y D H L D Sbjct: 433 MWELATSGLQKAL------------ENRGLDYIVN-----EGDGAFYGPKIDFH---LRD 472 Query: 270 SLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMR 323 S +G + GT SLP T+ G DG+ H V + G++ Sbjct: 473 S-------------IGRTWQCGTIQLDMSLPEKFDLTYVGEDGEKHRPVMLHRVVYGSIE 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +W + P ++ ++ I + E++ R+ G V D+ Sbjct: 520 RFIGILIENFAGAFPVW---MTPVQVRILPITERHA---EYAEELRKRMFDRGIRVEVDN 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E+ G + + + P ++VG + V ++ MS ++ I + + + Sbjct: 574 RNEKTGYKIRESQVKKTPYTLVVGDQEQESGTVALRKYGEKDSTVMSADDFIAFVEKKIA 633 Query: 444 NNRP 447 P Sbjct: 634 ERSP 637 >gi|126459705|ref|YP_001055983.1| prolyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] gi|166980146|sp|A3MV50|SYP_PYRCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|126249426|gb|ABO08517.1| prolyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] Length = 487 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 5/162 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + Y GTK++ T+ DG SYGI + R +AA++ + D G Sbjct: 226 GRALQIGTVHYLGTKFTEVFEVTYLAPDGSRRLAHTTSYGI-SERSIAAMLITHGDDAGT 284 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAV 394 + P +AP ++ ++ I + V A E+ L + G V D ++ G +F Sbjct: 285 VIPPKLAPIQVVVVPIFYGEEEKGVVMPAAEQAAKALREAGFRVHVDGRDDKTPGWKFYY 344 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +L G PL+V VG + V +V + R T + ++++E+++ Sbjct: 345 WELRGVPLRVEVGKRDVEGRQVVVARRDTLAKYAVAVDELVD 386 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 4/158 (2%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG Y W P G K NV A+IR + TG E+ P + + ES + KE+ Sbjct: 40 KGAYVWRPYGMKIRRNVEALIRRLHDETGHEEVLFPVFIPYEFFGKESEHIRGFEKEVFW 99 Query: 96 LADRND--KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 ++ + + ++ PT E + + + ++ Y++LP YQI FR E + ++R R Sbjct: 100 VSKGGEGGERLVLRPTSETAIMPMVKLWVQDYKDLPLRLYQIVSVFRAETKMTHPMIRLR 159 Query: 154 EFLM-KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 E M K+A++ + E ++ + Y RIF + L Sbjct: 160 EISMFKEAHTVHVDREDAERQVREAVEIYKRIFDEMCL 197 >gi|195387892|ref|XP_002052626.1| GJ17652 [Drosophila virilis] gi|194149083|gb|EDW64781.1| GJ17652 [Drosophila virilis] Length = 745 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 90/410 (21%), Positives = 172/410 (41%), Gaps = 48/410 (11%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G + P G + + +IR E + G E+ P + +A LW+ SG + Y Sbjct: 360 HELSPGSCFFQPRGAHIYNTLMNLIRGEYRKRGFQEVISPNIYNAKLWMTSGHWQHYADN 419 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +K + P + IF + +S+R LP + R+EL G+ R Sbjct: 420 MFSFEAEKEKFAL-KPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLTR 478 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--GDLSHE 209 R F DA+ F PE K S K + +LR + + S + + P G+L Sbjct: 479 VRRFQQDDAHIF-CAPEQIK-SEMKGCLDFLRHVYTIFGFSFQLVLSTRPDKYLGELEQ- 535 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 D E + ++ +F +P + D A Y D+ + D Sbjct: 536 ----WDAAEKAL--AESLNEFGMPWKENPGDG------------AFYGPKIDI---TIMD 574 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAV 328 +L + + ++ F +++L + DG K V + +G++ + A+ Sbjct: 575 ALKRPFQCATIQLD----FQLPIRFNL----NYIADDGEKKRPVIIHRAILGSVERMIAI 626 Query: 329 IESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYAR--LSKVGCDVFWDDMG 385 + ++ GK WP ++P ++ ++ + A+D+ + +++YA +S+ CD G Sbjct: 627 LTENYAGK---WPFWLSPRQVMVVPVGPAYDEYAKSVRDQLYAAGFMSEADCDA-----G 678 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + + + A L F ++VG K S + V ++ R + ++S+ E+I Sbjct: 679 DTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELI 728 >gi|221061291|ref|XP_002262215.1| bi-functional aminoacyl-trna synthetase [Plasmodium knowlesi strain H] gi|193811365|emb|CAQ42093.1| bi-functional aminoacyl-trna synthetase,putative [Plasmodium knowlesi strain H] Length = 715 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 72/332 (21%), Positives = 125/332 (37%), Gaps = 63/332 (18%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E +M +F I+S+R+LP Q R E + +R+REFL ++ + T Sbjct: 327 PTSETIMYSVFSKWIRSHRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGH----TA 382 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++ KM L ++ R + + + G Sbjct: 383 HKNEEEAVKMVFDILDLYRRWYEECLAVPIIKG--------------------------- 415 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 I SE F A + +T++ + EN R I+ Sbjct: 416 ----IKSEGEKFGG------------ANFTSTAEAF-------ISENGR----AIQAATS 448 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 Y GT ++ F+ + K YV S+G R + +I + D KG++ P VA F Sbjct: 449 HYLGTNFAKMFKIEFEDENEKKQYVHQTSWGC-TTRSIGIMIMTHGDDKGLVLPPKVAKF 507 Query: 348 KISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMG-EQIGSQFAVADLLGFPLQ 403 K+ ++ I + V + C+ I L + DD G +F +L G P++ Sbjct: 508 KVVIVPILYKNTDENVIFNYCKDIEKVLKNAQINCILDDRELYSPGYKFNHWELRGVPIR 567 Query: 404 VIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + VG K + ++ R T + ++ E V+ Sbjct: 568 IEVGPKDIQNNSCLFVRRDTNEKFNVKKESVL 599 >gi|156937156|ref|YP_001434952.1| prolyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I] gi|172044461|sp|A8A9E3|SYP_IGNH4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|156566140|gb|ABU81545.1| prolyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I] Length = 478 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 10/159 (6%) Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 FD++ + RV +++G + + G +S+P F DG YV SYG+ + RV+A+ Sbjct: 212 FDTVMPDGRV----LQIGTVHHLGQNFSVPFEVRFHTEDGDKDYVWQTSYGL-SDRVIAS 266 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR----DACEKIYARLSKVGCDVFWDD 383 ++ D +G++ P VAP ++ ++ I ++ + + +++ L G DD Sbjct: 267 LVAVHGDERGLVLPPEVAPVQVVIVPIPQKEEEQQRKVLEEAKRVEEELKARGWRTVLDD 326 Query: 384 MGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E G+++ +L G P ++ +G K V ++ + R Sbjct: 327 RDELTPGAKYYEWELKGVPFRIEIGKKEVEGDELTVARR 365 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 6/160 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG+ W P G K V IIR+ + TG E+ P L L ES + E+ Sbjct: 31 KGMGVWPPFGFKLRKLVLNIIRDLLDSTGHEEVLFPVLIPKTLLEKESEHIRGFEGEVFW 90 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D + PT E ++ + I SY+ LP YQI +R E + ++R Sbjct: 91 VTKGGHEDLDVPLALRPTSETAISYMESFWISSYKQLPMKLYQIVPVYRYETKATRPLIR 150 Query: 152 SREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 RE K+A++ + EG+ + Y ++F RLG+ Sbjct: 151 LREVSTFKEAHTAHESFEGADSQCAEAIEIYKKVFDRLGI 190 >gi|16331761|ref|NP_442489.1| threonyl-tRNA synthetase [Synechocystis sp. PCC 6803] gi|2501062|sp|Q55806|SYT_SYNY3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|1001722|dbj|BAA10559.1| threonyl-tRNA synthetase [Synechocystis sp. PCC 6803] Length = 603 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 87/428 (20%), Positives = 174/428 (40%), Gaps = 64/428 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML-RL 96 G+ W P G + +++EQ + G + + P + DL+ +SG + Y ++M + Sbjct: 217 GLPLWTPKGTIIRTILEDFLKQEQIKRGYLPVVTPHIARVDLFKQSGHWQKYQEDMFPMM 276 Query: 97 ADRNDKA-----MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 A+ ++A + P + I++S ++SYR+LP + +R E G+ Sbjct: 277 AESPEEAAQEMGFVLKPMNCPFHIQIYKSELRSYRDLPLRLAEFGTVYRYEQSGELGGLT 336 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-----AESGP-IGG 204 R R F + D++ F +TP+ + + L +F L LK+ R ES IG Sbjct: 337 RVRGFTVDDSHLF-VTPDQLDEEFLSVVDLILTVFKSLQLKNFKARLSFRDPESDKYIGS 395 Query: 205 DLSHEFIVLADTGETQVFCSKDFMD-FPIPSENTDFD---DIISLNSIVEQWTAPYAATS 260 D + E G + + MD F P E + D I +++ +W Sbjct: 396 DEAWE----KAQGAIRRAVQELEMDYFEAPGEAAFYGPKLDFIFQDALEREW-------- 443 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSY 317 ++G + Y+LP + ADG + V + Sbjct: 444 ----------------------QLGTV---QVDYNLPERFDLEYIAADGSRQRPVMIHRA 478 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ + ++ + G +W +AP ++ L+ + D+ A + I ++ +G Sbjct: 479 PFGSLERLIGILIEEYAGDFPLW---LAPIQVRLLAVS--DEFLPFA-QSIVQQMQSLGL 532 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D G+++G A+ P+ ++G+K V + + I+ R +G ++ + EV+ Sbjct: 533 RAEVDTSGDRLGKMIRNAEKQKIPVMAVIGAKEVEANALNIRTRASGELGEIPVTEVLEK 592 Query: 438 ASHRFSNN 445 +N+ Sbjct: 593 LQATVTNH 600 >gi|302874879|ref|YP_003843512.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|307690504|ref|ZP_07632950.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|302577736|gb|ADL51748.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B] Length = 635 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 91/403 (22%), Positives = 155/403 (38%), Gaps = 51/403 (12%) Query: 42 WLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND 101 +LP G +++ R + G E+ P + S +LW +SG +D Y KE + ++ Sbjct: 265 FLPKGMIVRNSLEDYWRVIHKKAGYQEIKTPIILSEELWHQSGHWDHY-KENMYFTSIDE 323 Query: 102 KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDA 160 K P + +++ + SYR LP ++ L R EL G+MR R F DA Sbjct: 324 KPFAVKPMNCPGSILAYKNALHSYRELPLRLAELGLVHRHELSGALHGLMRVRCFTQDDA 383 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 + F + + + + + F++ + E+ V T Sbjct: 384 HIFMTKDQITDELLD--LIKLIDDFYK-----------------NFGFEYFVELSTRPEN 424 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 S + + T D I E A Y D H L DS Sbjct: 425 SMGSDEDWELATNGLRTALDKAGLSYKINEGDGAFYGPKIDFH---LRDS---------- 471 Query: 281 GIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSH 333 +G + GT + LP + G DG+ H V + G++ R + +IE Sbjct: 472 ---IGRTWQCGTIQLDFQLPERFDIDYIGPDGEKHRPVMVHRVVFGSIERFIGILIEHFA 528 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 +P +AP ++ ++NI + E+I L + G V D E+IG + Sbjct: 529 GA----FPAWLAPVQVKVMNIT---DSSKGYVEEIARVLEEKGIRVESDLRNEKIGYKIR 581 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A L P +++G K +++ + ++ R G MS+EE N Sbjct: 582 EAQLQKIPYMIVIGEKEMNEKTIAVRSRKDGDIGTMSIEEFSN 624 >gi|218901598|ref|YP_002449432.1| prolyl-tRNA synthetase [Bacillus cereus AH820] gi|228925648|ref|ZP_04088737.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229120054|ref|ZP_04249309.1| Prolyl-tRNA synthetase 2 [Bacillus cereus 95/8201] gi|218539056|gb|ACK91454.1| prolyl-tRNA synthetase [Bacillus cereus AH820] gi|228663520|gb|EEL19105.1| Prolyl-tRNA synthetase 2 [Bacillus cereus 95/8201] gi|228834126|gb|EEM79674.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 476 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|303229391|ref|ZP_07316181.1| threonine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] gi|302515927|gb|EFL57879.1| threonine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] Length = 636 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 89/395 (22%), Positives = 161/395 (40%), Gaps = 47/395 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +I + G +LP G + + RE + E+ P + + LW SG +D Y Sbjct: 256 VIKEEGPGFPFFLPKGMALRNELENFWREVHHDFEYDEIRTPIILNKHLWETSGHWDHY- 314 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +E + +D+ P + ++++ + SYR+LP + ++ L R EL G+ Sbjct: 315 RENMYTTIIDDEEYAIKPMNCPGGILVYQNEMHSYRDLPLRYAELGLVHRHELSGALHGL 374 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSH 208 R R F DA+ F + PE + K+ + RI+ + GLK + + + GD Sbjct: 375 FRVRAFTQDDAHVF-MLPEQMQSELMKVIELFDRIYSQFGLKYHVELSTKPDNAMGD--- 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + I A T + +D+ I + F Y D H E Sbjct: 431 DAIWEAATEALRNAIEAKGIDYVINPGDGAF----------------YGPKLDYHIE--- 471 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDH-YVQMGSYGIGAMRVV 325 DSL R + G I +LP + + G DG+ H + + G+M Sbjct: 472 DSL-------GRTWQCGTI---QLDMNLPERFNVEYIGEDGQKHRTIMIHRACFGSMERF 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP ++ ++ I + H + +++ R V +V DD Sbjct: 522 IGILTEHYAGA---FPTWMAPVQVKVLPISEKHVEYANQLAKQM--RHDYVRVEV--DDR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E+IG + A + P ++VG K + D+ V ++ Sbjct: 575 NEKIGYKIRQAQMEKVPYMLVVGDKEMEDNSVNVR 609 >gi|251798759|ref|YP_003013490.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247546385|gb|ACT03404.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 645 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 84/401 (20%), Positives = 163/401 (40%), Gaps = 55/401 (13%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G K + I + + R G + P L + +L+ SG ++ Y ++M + Sbjct: 264 QGLPLWLPNGAKVRRTLERYIVDLEERLGYEHVYTPVLANVELYKISGHWEHYSEDMFPV 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P + +++S ++SYR+LP ++ R E+ G+ R R Sbjct: 324 MALDNEELVLRPMNCPHHMMVYKSDMRSYRDLPVRIAEMGTMHRYEMSGALTGLHRVRAM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F P+ K + ++ +++ G+K R LS+ D Sbjct: 384 TLNDAHIF-CRPDQIKEEFARVVNLIRKVYEDFGIKEYRFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP----------YAATSDVHNE 265 +T+ + D M + + L +VE+ P Y DV Sbjct: 429 PQDTEKYFQNDEM-WEMSQR--------MLREVVEELGLPFFEAEGEAAFYGPKLDV--- 476 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRV 324 ++ +L + + +S ++ F ++ L + G DGK H + G I M Sbjct: 477 QIKTALGKEETLSTAQLD----FLLPDRFEL----EYIGEDGKKHRPVVIHRGIISTMER 528 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDD 383 + A + + G +W ++P + +I + A++ R+ EK L G V D Sbjct: 529 MTAFLLENFAGALPLW---LSPVQAKVIPVSTAYEAYAREVEEK----LQLAGIRVESDL 581 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G + A L P ++VG V ++ R G Sbjct: 582 RNEKLGYKIREAQLEKLPYMLVVGENEAQSGSVSVRKRGEG 622 >gi|302542211|ref|ZP_07294553.1| proline-tRNA ligase [Streptomyces hygroscopicus ATCC 53653] gi|302459829|gb|EFL22922.1| proline-tRNA ligase [Streptomyces himastatinicus ATCC 53653] Length = 471 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 74/350 (21%), Positives = 141/350 (40%), Gaps = 73/350 (20%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GKE+ ++ ++ PT E ++ + F ++SYR+LP Q R ELRPR Sbjct: 99 GKEL-------EEPVVVRPTSETIVNEYFSKWVQSYRDLPLLINQWANVVRWELRPRL-F 150 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E ++ ++ HR Sbjct: 151 LRTTEFLWQEGHTAHATYEDAREFAARI--------HR---------------------- 180 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 V+ DFM+ ++++++ ++ + TA V+ L Sbjct: 181 ----------DVYA--DFME-----------NVLAMDVVLGRKTARERFAGAVNTLTLEG 217 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 + + K +++G G ++ + + DG+ V S+G R+V A++ Sbjct: 218 MMGDGK-----ALQLGTSHELGQNFARAFNTRYLSRDGEQELVWQTSWG-STTRMVGALV 271 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 D G+ P +AP + ++ +K D V A + RL+ G V DD + Sbjct: 272 MMHGDDDGLRLPPRLAPVQAVVLAVKGDDAVL-AAVRETGDRLAAAGVRVQVDDRTDMPF 330 Query: 390 SQFAV-ADLLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEV 434 + AV +L G P++V +G + + + R+ G +R D+ E V Sbjct: 331 GRRAVDWELRGVPVRVEIGPRDLEAGTATLARRIPGGKEPVRTDLVAETV 380 >gi|269792334|ref|YP_003317238.1| threonyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099969|gb|ACZ18956.1| threonyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 631 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 90/415 (21%), Positives = 155/415 (37%), Gaps = 62/415 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I G + P G L+ + + E R G E+ P + LW SG +D Y + Sbjct: 252 IQPEGPGFPFFHPKGMVILNELVDFWKREHKRRGYNEIRTPLILDRSLWERSGHWDHY-R 310 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 + + +D+ P + +F+S +SYR+LP ++ + R E G+M Sbjct: 311 DNMYFTSIDDRPFAIKPMNCPGGILVFKSSTRSYRDLPLRMSELGVVHRHERSGVLHGLM 370 Query: 151 RSREFLMKDAYSFDLTPEGSKHS----YNKMFVSYLRIF---HRLGLKSIPMRAESGPIG 203 R R F DA+ + TP+ + M Y ++F +R+ L + P Sbjct: 371 RVRCFTQDDAHIY-CTPDQVGDEIAGVIDLMKYVYSQVFGFNYRVELSTRPDNYMG---- 425 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 S E LA+ Q + D+ I + F Y D H Sbjct: 426 ---SLELWNLAEEKLKQTLEATG-TDYKINPGDGAF----------------YGPKIDFH 465 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSY 317 E +G + GT + +P ++ GADG DH V + Sbjct: 466 LED----------------SIGRTWQCGTIQLDFQMPEKFDVSYVGADGADHRPVMIHRT 509 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ ++ + G W +AP ++ ++ +K D ++ A L G Sbjct: 510 VFGSLERFLGILIEHYAGAFPFW---LAPVQVRVLPVKPE---FEDRSRQVEAALKSWGV 563 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 V D E++G + A L P +++G+K V ++HR G MS++ Sbjct: 564 RVEVDVRDEKLGKKIRDAQLSKVPYMIVIGAKEAETGGVSVRHRSDGDLGTMSMD 618 >gi|282859312|ref|ZP_06268424.1| proline--tRNA ligase [Prevotella bivia JCVIHMP010] gi|282587892|gb|EFB93085.1| proline--tRNA ligase [Prevotella bivia JCVIHMP010] Length = 493 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 89/170 (52%), Gaps = 5/170 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGV-STRLIGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINI-KAHDQVCR--DACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I K +Q+ + D + + L + G V +D+ ++ G +FA Sbjct: 295 VLPPKIAPIQVVIVPIFKGEEQLQQLTDKLQPVIDDLREAGITVKFDNSDNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +L G P+++ +G + + ++ +E+ R T +E +S + + +Y + ++ Sbjct: 355 YELKGVPVRLAMGGRDLENNTIEVMRRDTLEKESVSFDGIADYVKNLLND 404 >gi|188994851|ref|YP_001929103.1| prolyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] gi|259511612|sp|B2RJG1|SYP_PORG3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|188594531|dbj|BAG33506.1| prolyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] Length = 493 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 84/160 (52%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ + TF DG +V S+G+ + R++ A+I S D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFNVTFADKDGNRDFVWATSWGV-STRLMGALIMSHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP+++ ++ I +++ EK I L G V +D+ ++ G +FA Sbjct: 295 VLPPKLAPYQVVIVPIYRNEEQLAQIDEKATQIIQALRAKGISVKYDNSDNKKPGWKFAE 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +L G P+++ +G++ + ++ +EI R T +E + L+ + Sbjct: 355 YELKGVPVRLAMGARDLENNTIEIARRDTLTKETVGLDGI 394 Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ I+S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEELIVRPTSETIIWNTYKNWIQSHRDLPILCNQWANVVRWEMRTRL-FLRTAEFLWQEG 176 Query: 161 YSFDLT 166 ++ T Sbjct: 177 HTAHAT 182 >gi|325527705|gb|EGD04994.1| threonyl-tRNA synthetase [Burkholderia sp. TJI49] Length = 406 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 4/134 (2%) Query: 31 MIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDS 88 + HQ S G W P G L V IR + G E+ P + + LW +SG ++ Sbjct: 15 LFHQQDESPGAIFWHPRGMVLLRVVEDYIRARMRQAGFSEVRTPQIIARSLWEQSGHWEK 74 Query: 89 YGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 +G+ M L +D+ P IFR ++SYR+LP + + R E Sbjct: 75 FGRGMFSLQS-DDRPYCLKPMSCPCHVQIFRKGVRSYRDLPVRYSEFGAVHRAEPSGALH 133 Query: 148 GVMRSREFLMKDAY 161 G+MR+R F DA+ Sbjct: 134 GLMRARAFTQDDAH 147 >gi|330810593|ref|YP_004355055.1| Threonine--tRNA ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378701|gb|AEA70051.1| Threonine--tRNA ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 640 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 9/196 (4%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + S G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEESPGMVFWHPNGWTLYQVLEQYMRQVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M N I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTQSENRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F DA+ F T E + + ++ G Sbjct: 356 EFGACHRNEPSGALHGIMRVRAFTQDDAHIF-CTEEQMQAESAAFIKLTMDVYRDFGFTE 414 Query: 193 IPMRAESGP---IGGD 205 + M+ + P +G D Sbjct: 415 VEMKLSTRPEKRVGSD 430 >gi|332830447|gb|EGK03075.1| threonyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286] Length = 650 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 95/434 (21%), Positives = 159/434 (36%), Gaps = 90/434 (20%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + +++ Q + ++ P + S L+V SG Y+ YGK+ + Sbjct: 261 KGLPLWLPRGTQLRLKLEDFLKKIQRKFDYQQVMTPHIGSKILYVTSGHYEKYGKDSFQP 320 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + + P + +I++ +SY++LP + +R E G+ R R Sbjct: 321 IHTPEEGEEFLLKPMNCPHHCEIYKIIPRSYKDLPLRLAEFGTVYRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TPE K + K+ IF L ++ + I L Sbjct: 381 GFTQDDAHIF-CTPEQLKAEFLKVMDIVFIIFKALDFENFEAQ--------------ISL 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A + EK LP Sbjct: 426 RDPENREKYIGSD-----------------------ENWEKAERAIIEACEEK---GLPA 459 Query: 274 NKRVSARGIEVGHIFYFGTK---------------------YSLP--MSATFKGADGKDH 310 +E+G ++G K Y+LP + GAD + H Sbjct: 460 K-------VELGEAAFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFELEYTGADNQKH 512 Query: 311 Y-VQMGSYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACE 366 V + G+M R +A +IE + GK +W PD V IS + D Sbjct: 513 RPVMIHRAPFGSMERFIAVLIEHTA-GKFPLWLAPDQVVILPIS--------EKFNDYAH 563 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++ + + G DD E+IG + +L P +IVG K +V ++ + G + Sbjct: 564 RVNSYFKQQGISSQVDDRNEKIGRKIRDNELKRIPYLLIVGEKEAETEEVSVRKQGEGDK 623 Query: 427 EDMSLEEVINYASH 440 M N+A+ Sbjct: 624 GSMKF---TNFAAQ 634 >gi|219684697|ref|ZP_03539640.1| prolyl-tRNA synthetase [Borrelia garinii PBr] gi|219672059|gb|EED29113.1| prolyl-tRNA synthetase [Borrelia garinii PBr] Length = 488 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 95/428 (22%), Positives = 170/428 (39%), Gaps = 85/428 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK++L I+Q+ A++A + + KG +P G + +I+ ++ Sbjct: 13 SKWYLDIVQK----AKLADYSPV----------KGCMVIMPYGYSIWSKIQSILDKKFKE 58 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIF 118 +G P L L E + + E + D +++ + PT E ++ +++ Sbjct: 59 SGHENAYFPMLIPYGFLEKEKDHIEGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMY 118 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 IKSYR+LP Q R E R R +R+ EFL ++ + T ++ + Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKRTR-PFLRTTEFLWQEGH----TAHATEEEALEET 173 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + L ++ R + D VFC K SE Sbjct: 174 LLILDLYKRF------------------------MEDYLAIPVFCGK-------KSEKEK 202 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 F +S SI ++L ++K+ ++ Y G ++ Sbjct: 203 FAGAVSTYSI--------------------EALMQDKK----ALQAATSHYLGLNFAKAF 238 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 F+ DGK +V S+G+ + R++ A+I D KG+I P +AP +I +I I K Sbjct: 239 DVKFQDKDGKMRHVFASSWGV-STRLIGALIMVHSDEKGLILPPRIAPIEIIVIPIFKKE 297 Query: 358 DQVCR---DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D++ + D + + L K V D D+ G +F+ A+ G P+++ VG V Sbjct: 298 DEINKKILDYSDCVVNALKKAEFRVEVDKDVRSSPGFRFSSAEFKGIPIRIEVGINDVLL 357 Query: 414 SKVEIKHR 421 + V I R Sbjct: 358 NSVTIVRR 365 >gi|194017903|ref|ZP_03056511.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194010369|gb|EDW19943.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 642 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 87/418 (20%), Positives = 171/418 (40%), Gaps = 43/418 (10%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP GQ + + A RE +N+ E+S P + + +LW +SG +D Y Sbjct: 256 MFSEEAPGMPFYLPKGQIVRNELMAFSREVRNKAQYEEVSTPFMMNQELWEKSGHWDHYH 315 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M ++ + + P + +F++++ SYR+LP + R E G+ Sbjct: 316 ENMY-FSEVDHTSFALKPMNCPGHMLMFKNNLYSYRDLPIRMAEFGQVHRHEFSGALNGL 374 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 R R F DA+ F L + + ++F ++ G + + R E +G D Sbjct: 375 FRVRTFCQDDAHIF-LREDQIEAEIKRIFQLVDHVYRTFGFEYSVELSTRPEKA-LGDD- 431 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + D E+ + K+ +D D+ LN E A Y D H Sbjct: 432 -----AIWDISESAL---KNVLD----RLKVDY----QLN---EGDGAFYGPKIDFH--- 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 + D+L + + + ++ F K+ L + K V + S G++ Sbjct: 470 IKDALQRSHQCATIQLD----FQMPEKFDL---TYINEKNEKVRPVVIHSAIFGSLDRFF 522 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ G +W +AP ++ +I + V D C ++ +L K+G V D+ E Sbjct: 523 GILIEHFAGAFPLW---LAPVQVQIIPVTT---VHLDHCLEVQQQLRKIGIRVTIDERDE 576 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 ++G + A + P ++G + D + I+ + + +E+ + A + N Sbjct: 577 KLGYKMREAQMQKIPYIAVIGDTEMQDKSLNIRQHGEKASKQLFIEDFKHLAVQQIQN 634 >gi|261408878|ref|YP_003245119.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261285341|gb|ACX67312.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 645 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 83/412 (20%), Positives = 166/412 (40%), Gaps = 53/412 (12%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ WLP G K + I + + R G + P L + +L+ SG ++ Y ++M Sbjct: 263 GQGLPIWLPNGAKLRRTLERYIVDMEERLGYQHVYTPVLGNVELYKTSGHWEHYQEDMFP 322 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + +++ ++ P + +++S + SYR+LP ++ ++ R E+ G+ R R Sbjct: 323 KMEMDNEELVLRPMNCPHHMMVYKSDMHSYRDLPIRIAELGMQHRYEMSGALTGLHRVRA 382 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + D++ F P+ K + ++ + ++ G+ R LS+ Sbjct: 383 MTLNDSHIF-CRPDQIKEEFARVIQLIMTVYKDFGIHDYRFR---------LSYR----- 427 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP----------YAATSDVHN 264 D +T+ + D M + + L +VE P Y DV Sbjct: 428 DPQDTEKYFQNDEM-WEMSQR--------MLREVVESLDMPFYEAEGEAAFYGPKLDV-- 476 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMR 323 ++ +L + + +S ++ F ++ L + G DG+ H + GI G M Sbjct: 477 -QIRTALGKEETLSTVQLD----FLLPERFEL----EYVGDDGQKHRPVVIHRGILGTME 527 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 A + + G +W ++P ++ +I + D +++ +L G V D Sbjct: 528 RFTAFLLENFAGALPLW---LSPVQVKVIPV---SNAFEDYAKEVAEKLQFAGISVEPDL 581 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++G + A L P IVG + V ++ R G L+E+I Sbjct: 582 RNEKLGYKIREAQLEKIPYMFIVGENEKNAGAVSVRKRGEGDIGAQPLDEII 633 >gi|295696884|ref|YP_003590122.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912] gi|295412486|gb|ADG06978.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912] Length = 641 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 92/407 (22%), Positives = 158/407 (38%), Gaps = 49/407 (12%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ LP G + + +RE N E+ P L LW SG +D Y KE + Sbjct: 265 APGMPFLLPKGMVIRNELERFMREFLNEYDYEEVKTPILMDRVLWERSGHWDHY-KENMY 323 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + +++ P + F+ ++SYR+LP + L R EL G++R RE Sbjct: 324 FTEVDEREFALKPMNCPGHALTFKHRVRSYRDLPIRMAEFGLLHRHELSGALHGLLRVRE 383 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE--SGPIGGDLSHEFIV 212 F DA+ F + P+ + R++ G P R E + P S E Sbjct: 384 FTQDDAHLF-VRPDQIQDEVFACMDLIDRVYAAFGF---PYRVELSTRPENSTGSDELWE 439 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 A G + S+ +++ I + F Y D H + DSL Sbjct: 440 AATEGLRKALESRG-LEYQINEGDGAF----------------YGPKIDFH---VKDSL- 478 Query: 273 ENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAV 328 R + G I F K+ L T+ G D + H V + +G+ + Sbjct: 479 ------GRSHQCGTIQLDFQMPEKFDL----TYVGEDNERHRPVMIHRAVLGSFERFFGL 528 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + ++G +W +AP + ++ I A +++ +R +G V D E+I Sbjct: 529 LIEHYNGAFPVW---LAPVQARVLTIGAGHL---PYAKEVQSRARAMGLRVEVDGRAEKI 582 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + A + P +++G + +V ++ R G S EEV+ Sbjct: 583 GYKVREAQVQKIPYMLVIGDQEAQTGEVSVRKRGQGDLGRRSAEEVL 629 >gi|254511025|ref|ZP_05123092.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] gi|221534736|gb|EEE37724.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] Length = 652 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 92/426 (21%), Positives = 153/426 (35%), Gaps = 64/426 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G K + +R Q+R G +E++ P + LW SG +D Y + Sbjct: 264 MQEEAPGQIFWHPNGWKIYTTLQDYMRRMQDRDGYVEVNTPQVVDRKLWEASGHWDKYQE 323 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + +F +KSYR+LP + R E Sbjct: 324 NMFIVEVDEEHAREKAINALKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCNRYEPSGA 383 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP--- 201 G+MR R F D + F E S F+++L +++ LG ++ + P Sbjct: 384 LHGIMRVRGFTQDDGHIF--CSEDQIESETAKFIAFLSKVYADLGFHDWTIKLSTRPEKR 441 Query: 202 IGGDLSHEFI--VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 IG D S + + L D C D+ + F Sbjct: 442 IGSDESWDIVEKALGDA------CKAAGYDYEVLEGEGAF-------------------- 475 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP-----MSATFKGADGKDHY-VQ 313 + KL +L + +G + GT P + A F GADG H Sbjct: 476 ---YGPKLEFTLTD---------AIGRDWQCGTLQVDPNLPERLDANFIGADGAKHRPFM 523 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 + +G+ ++ H GK W +AP ++ + +I + D ++ L Sbjct: 524 LHRATLGSFERFIGILIEEHAGKLPFW---LAPRQVVVASITSE---ADDYVMEVVDTLK 577 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G D E+I + + P+ + VG + V + V I+ + SLE Sbjct: 578 AAGIRAEADIRNEKINYKVREHSVSKVPVILAVGHREVEERTVTIRRLGEKQTQVQSLET 637 Query: 434 VINYAS 439 V N S Sbjct: 638 VTNELS 643 >gi|221066194|ref|ZP_03542299.1| threonyl-tRNA synthetase [Comamonas testosteroni KF-1] gi|220711217|gb|EED66585.1| threonyl-tRNA synthetase [Comamonas testosteroni KF-1] Length = 639 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 88/390 (22%), Positives = 143/390 (36%), Gaps = 54/390 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I +HS G W P G V +R G E+ P + LW ++G +D Y + Sbjct: 255 IDEHSPGTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQILDKGLWEKTGHWDKYRE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M D + P + IF+ IKSYR+LP F + R+E G+M Sbjct: 315 NMF-TTDSEKREYALKPMNCPGHIIIFKQGIKSYRDLPLRFGEFGNCHRNEPTGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGDL 206 R R F D + F E + F S L +++ G +I R + P IG D Sbjct: 374 RVRAFTQDDGHIF--CTEDQIQAEVTAFTSLLQKVYADFGFTNILYRLSTRPEKRIGTDE 431 Query: 207 SHEFI--VLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSD 261 + + LA+ G C +++ P E + I +++ +W T Sbjct: 432 AWDKAENALAE-GLRASGCEFEYL----PGEGAFYGPKIEYTLKDALGREWQ---CGTIQ 483 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-G 320 V ++PE + A F G DG+ H M I G Sbjct: 484 VD-----PNMPER-----------------------LDAEFVGEDGERHRPIMLHRAILG 515 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDV 379 ++ ++ H G W +AP + +++NI A ++ +K+ L V Sbjct: 516 SLERFIGILVEHHSGALPAW---LAPVQAAVLNITDAQADYAQEVAQKLQKALPNQSLRV 572 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 D E+I + + P ++ G K Sbjct: 573 VTDLRNEKITYKIREHSMQKLPYILVAGDK 602 >gi|90021224|ref|YP_527051.1| threonyl-tRNA synthetase [Saccharophagus degradans 2-40] gi|123090560|sp|Q21KE0|SYT_SACD2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|89950824|gb|ABD80839.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Saccharophagus degradans 2-40] Length = 636 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 88/405 (21%), Positives = 152/405 (37%), Gaps = 64/405 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G+ W P G + +RE Q G E+ P + LW SG +D + Sbjct: 255 IQEEAPGMVFWHPNGWSIYTAIEEYMREVQRLNGYEEIKTPQVVDRSLWERSGHWDKFRD 314 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + ++ D A+ P + +F +KSYR+LP + R+E G+ Sbjct: 315 NMFTVESESRDYAV--KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGCCHRNEASGTLQGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGD 205 MR R F+ DA+ F E +F L +++ G + + +R + P +G D Sbjct: 373 MRVRGFVQDDAHIF--CSESMIQDEVSVFTDLLFKVYKDFGFEDVIIRLSTRPEQRVGSD 430 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFP---IPSENTDFDDIISLNSIVEQWTAPYAATSDV 262 + D E + + D P +P E + I + Sbjct: 431 ------EVWDKAEKALSDALDAKGLPWQLLPGEGAFYGPKIEFS---------------- 468 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSY 317 L D L G ++ GT +S+P + A F DG M Sbjct: 469 ----LKDCL-------------GRVWQCGTIQVDFSMPGRLDAQFVAEDGSRQVPVMLHR 511 Query: 318 GI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 I G+ ++ ++G W +AP + L+NI + + +K+ L G Sbjct: 512 AILGSFERFIGILIEEYEGAFPAW---LAPTQAVLLNITDNQA---EYVKKVENSLKNKG 565 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 V D E+IG + + P ++VG + V ++ V ++ R Sbjct: 566 FRVNSDLRNEKIGFKIREHTIQKVPYLLVVGDQEVENNSVAVRGR 610 >gi|313896316|ref|ZP_07829869.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] gi|312975115|gb|EFR40577.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] Length = 639 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 96/424 (22%), Positives = 160/424 (37%), Gaps = 51/424 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H+ G + P G + + RE R G E+S P + S LW SG + Y + Sbjct: 257 LHEEGPGFPFFHPNGMILRNELLNYWREVHRRYGYSEISTPVILSRKLWETSGHWFHYRE 316 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + ++RS + SYR+LP ++ L R EL G+ Sbjct: 317 NMYTTQIDEEDYAI--KPMNCPGCMLVYRSQLHSYRDLPLRLAELGLVHRHELSGALHGL 374 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 R R F DA+ F +TPE + + ++ GL S + P S E Sbjct: 375 FRVRNFTQDDAHLF-VTPEQIEGEIQHTIDLFDEVYRTFGL-SYKAELSTRPDDSMGSDE 432 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 LA +G + EN D I++ E A Y D H L D Sbjct: 433 MWELATSGLQKAL------------ENRGLDYIVN-----EGDGAFYGPKIDFH---LRD 472 Query: 270 SLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMR 323 S +G + GT SLP T+ G DG+ H V + G++ Sbjct: 473 S-------------IGRTWQCGTIQLDMSLPEKFDLTYVGEDGEKHRPVMLHRVVYGSIE 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +W + P ++ ++ I + E++ R+ G V D+ Sbjct: 520 RFIGILIENFAGAFPVW---MTPVQVRILPITERHA---EYAEELRKRMFDRGIRVEVDN 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E+ G + + + P ++VG + V ++ MS ++ I + + + Sbjct: 574 RNEKTGYKIRESQVKKTPYTLVVGDQEQESGTVALRKYGEKDSTVMSADDFIAFVEKKIA 633 Query: 444 NNRP 447 P Sbjct: 634 ERSP 637 >gi|169335721|ref|ZP_02862914.1| hypothetical protein ANASTE_02141 [Anaerofustis stercorihominis DSM 17244] gi|169258459|gb|EDS72425.1| hypothetical protein ANASTE_02141 [Anaerofustis stercorihominis DSM 17244] Length = 478 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 82/424 (19%), Positives = 166/424 (39%), Gaps = 80/424 (18%) Query: 25 LMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVE 82 ++ +T M+ + KG P G +N+ A + TG M P L + L E Sbjct: 24 VITKTEMVDYAPVKGFMVIRPYGYALWENIQAAFDKRFKETGHQNMYFPLLIPESFLNKE 83 Query: 83 SGRYDSYGKEML--------RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 + + E+ LA+R + PT E ++ ++ +KSYR LPF + Q Sbjct: 84 KEHVEGFAPEVAWVTHGGENELAER----LCIRPTSETIICSMYAKWLKSYRQLPFLYNQ 139 Query: 135 IQ--LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 +++ RP +R+ EFL ++ ++ T E ++ +M Y I Sbjct: 140 WANVVRWEKTTRP---FLRTSEFLWQEGHTVHATFEEAQEETLQMIDIYREI-------- 188 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 +D++ P+ ++ S E++ Sbjct: 189 -------------------------------CEDYLAMPV---------VVGQKSEKEKF 208 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 +A + ++L + + G +F + + F + K+ Y Sbjct: 209 AGAHATYT-------IEALMHDGQALQSGTSHNLADHFAKAFGI----KFLNKEEKEQYA 257 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 S+G+ + R++ +I D G+++P +AP ++ +I I H + D ++ +L Sbjct: 258 YSTSWGV-STRLIGGIIMVHGDDYGLVFPPKIAPTQVVIIPIAQHKEGVLDKANELKNKL 316 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 S + + D+ G +F ++ G P+++ +G K + + + I R T + +SL+ Sbjct: 317 SDLRV-LLDDNEAYSPGWKFNQWEMKGVPVRIEIGPKDIENGQCVIARRDTSEKISVSLD 375 Query: 433 EVIN 436 EV N Sbjct: 376 EVEN 379 >gi|253565674|ref|ZP_04843129.1| prolyl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|251945953|gb|EES86360.1| prolyl-tRNA synthetase [Bacteroides sp. 3_2_5] Length = 497 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 89/166 (53%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I A+L ++G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEQLKLIDAKVEGIVAKLKQLGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +E+ R T +E ++ + + Y + Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCDGIETYVQN 400 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYS 162 ++ ++ Sbjct: 173 WQEGHT 178 >gi|114559271|ref|XP_001168925.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 8 [Pan troglodytes] Length = 701 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 99/418 (23%), Positives = 164/418 (39%), Gaps = 57/418 (13%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E G E+ PT Sbjct: 296 EAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPT 355 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 L S LW +SG ++ Y ++M + D + P + +F +S+R LP Sbjct: 356 LFSTKLWEQSGHWEHYQEDMFAVQHITD-TLALKPMNCPAHCLMFAHRPRSWRELPLRLA 414 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-----GSKHSYNKMFVSYLRIFHR 187 R E G+ R R F DA+ F T + S + + + L R Sbjct: 415 DFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFR 474 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 L L + P SG +G C D + + +F + LNS Sbjct: 475 LALSTRP----SGFLGDP-----------------CLWDQAEQVLKQALKEFGEPWDLNS 513 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SATFKGA 305 A Y DVH L D+L R + G I + LP+ +KG Sbjct: 514 GD---GAFYGPKIDVH---LHDAL-------GRPHQCGTI---QLDFQLPLRFDLQYKGQ 557 Query: 306 DGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRD 363 G + V + +G++ + V+ S GK WP ++PF++ +I + + ++ ++ Sbjct: 558 AGALERPVLIHRAVLGSVERLLGVLAESCGGK---WPLWLSPFQVVVIPVGSEQEEYAKE 614 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 A + + A D D G + + A L + Q +VG K S V I+ R Sbjct: 615 AQQSLRAAGLVSDLDA---DSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTR 669 >gi|161763540|ref|YP_081979.2| prolyl-tRNA synthetase [Bacillus cereus E33L] gi|114152167|sp|Q63GI2|SYP2_BACCZ RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA ligase 2; Short=ProRS 2 Length = 476 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHGDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|238021043|ref|ZP_04601469.1| hypothetical protein GCWU000324_00940 [Kingella oralis ATCC 51147] gi|237868023|gb|EEP69029.1| hypothetical protein GCWU000324_00940 [Kingella oralis ATCC 51147] Length = 637 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 83/400 (20%), Positives = 156/400 (39%), Gaps = 54/400 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R E G E+ P + W +SG + +Y Sbjct: 258 LQDEAPGMVFWHPRGWTLWQVIEQHMRRELTAAGYQEVKTPQIMDKTFWEKSGHWANYKD 317 Query: 92 EM-LRLADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M L +++ D A+ + P H IF ++SY +LP + R+E Sbjct: 318 NMFLTSSEKRDYAVKPMNCPGH----VQIFNHGLRSYNDLPMRLAEFGSCHRNEPSGALH 373 Query: 148 GVMRSREFLMKDAYSF---DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGG 204 G+MR R F+ DA+ F D E ++ ++N++ ++I+ + G + ++ P Sbjct: 374 GLMRVRGFVQDDAHIFCTEDQIAEETR-AFNQLV---MKIYRQFGFHDVSIKLSLRPEKR 429 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 S E A+ G + +P E A Y + H Sbjct: 430 AGSDEIWDKAEQGLRDALTACGVTWQELPGEG-----------------AFYGPKVEYH- 471 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGA 321 + D+L R + G I + LP + A + D + V + +G+ Sbjct: 472 --IKDAL-------GRSWQCGTI---QLDFVLPERLDAEYVTRDNNRARPVMLHRAILGS 519 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + ++ H G +W +AP ++ ++NI D C ++ A+L G Sbjct: 520 LERFIGILIEQHAGSFPLW---LAPVQMVVMNITEKQA---DYCREVVAKLQAAGFRAEL 573 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + +P Q++VG K + + +V ++ + Sbjct: 574 DLRNEKIGYKIRDNSSQRYPYQIVVGDKEMENGQVAVRKK 613 >gi|58197411|dbj|BAD88636.1| hypothetical protein [Streptococcus suis] Length = 119 Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 1/102 (0%) Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 + +G P +APF + LI + D+ + + I A L G +V DD E++G +F+ Sbjct: 8 ESRGSTSPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRNERVGVKFS 67 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +DL+G P++V VG K +D VE+K + TG ++ +++++ Sbjct: 68 DSDLIGLPIRVTVGKK-AADGIVEVKIKGTGDTVEVHVDQLL 108 >gi|329927796|ref|ZP_08281857.1| threonine--tRNA ligase [Paenibacillus sp. HGF5] gi|328938197|gb|EGG34592.1| threonine--tRNA ligase [Paenibacillus sp. HGF5] Length = 636 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 160/411 (38%), Gaps = 45/411 (10%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP G + + R Q E+ P + + LW SG +D Y Sbjct: 255 MFSEEAPGMPFFLPNGMIIRNELEQFARGLQFHRDYDEVRTPLMMNKRLWEMSGHWDHY- 313 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 K+ + ++ P + ++++ + SYR LP + R E G+ Sbjct: 314 KDNMYFTQVDETEYALKPMNCPGHMLVYKNSLHSYRELPIRISEFGQVHRHEFSGALNGM 373 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F DA+ F + P+ + ++ +++ G + + + P S E Sbjct: 374 MRVRTFCQDDAHIF-VRPDQIQEEIKQVIDFISQVYQVFGFEYT-IELSTRPEDSMGSEE 431 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 A++ QV D M P I E A Y D H + D Sbjct: 432 LWEQAESSLQQVL---DQMGLPY--------------RINEGDGAFYGPKIDFH---ILD 471 Query: 270 SLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVV 325 SL R + G I F F K+ L ++ G D + H V + G++ Sbjct: 472 SL-------KRSWQCGTIQLDFQFPEKFDL----SYIGEDNQKHRPVVIHRAVFGSIERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP ++ +I + H D K+ RL G V D Sbjct: 521 IGILTEHYGGAFPMW---LAPVQVMIIPVSDH---YIDYSLKVKKRLENAGIRVNVDVRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E++G + A LL P +++G K + V ++ R G ++++++VI Sbjct: 575 EKLGYKIREAGLLKTPYTLVLGEKEMDSDHVSVRKRGEGELGEIAIDQVIE 625 >gi|169347105|ref|ZP_02866047.1| threonyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|169296788|gb|EDS78917.1| threonyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] Length = 643 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 89/409 (21%), Positives = 159/409 (38%), Gaps = 44/409 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G + + + I +E+ R G + P + +DL+ SG +D Y M L Sbjct: 259 QGLPLLMPKGARIIQTLQRWIEDEEQRRGYVLTKTPLMAKSDLYKISGHWDHYKDGMFVL 318 Query: 97 ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D + ++ P I+ S SYR+LP F + FR+E G++R R Sbjct: 319 GDEEKDSEVFALRPMTCPFQYAIYNSTQHSYRDLPVRFAETSTLFRNESSGEMHGLIRVR 378 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 +F + D + TPE + + + LG I D+++ F Sbjct: 379 QFTLADGHIV-CTPEQLEDEFKNTVDLVKYVMETLG------------IADDITYRFSKW 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTD--FDDIISLNSI----VEQWTAPYAATSDVHNEKL 267 D T+ +++ P ENT +I++ +I + A Y D+ + + Sbjct: 426 -DPNNTE-----KYINDPEAWENTQNIMREILNHLNIDFTEADDEAAFYGPKLDIQFKNV 479 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 K + I++ F M K + K Y+ S IG A Sbjct: 480 -----HGKEDTIITIQID----FALAERFGMYYIDKDGEKKRPYIIHRS-SIGCYERTLA 529 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G W +AP + ++ + D+ D ++ L + G V D E+ Sbjct: 530 MLIEKYAGALPTW---IAPVQAKVLPLS--DKYA-DYANEVVEELRRRGVRVEADHRAEK 583 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 IG + A L P ++VG K + +V ++ R G M L + +N Sbjct: 584 IGYKIREARLERTPYILVVGEKEAENKEVSVRSRKNGEEGAMPLADFVN 632 >gi|224539709|ref|ZP_03680248.1| hypothetical protein BACCELL_04618 [Bacteroides cellulosilyticus DSM 14838] gi|224518677|gb|EEF87782.1| hypothetical protein BACCELL_04618 [Bacteroides cellulosilyticus DSM 14838] Length = 520 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 87/166 (52%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 259 GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEYVWATSWGV-STRLMGALIMTHSDDNGL 317 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I + ++ + EK I A+L +G V +D+ ++ G +FA Sbjct: 318 VLPPHLAPIQVVIVPIYKNAEMLQKINEKVAGIVAKLKSMGISVKYDNADNKRPGFKFAD 377 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +E+ R T +E +S + + Y + Sbjct: 378 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETLSCDGIEEYVKN 423 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ I SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 141 EEELIIRPTSETIIWNTYKNWINSYRDLPILCNQWANVMRWEMRTRL-FLRTAEFLWQEG 199 Query: 161 YSFDLT 166 ++ T Sbjct: 200 HTAHAT 205 >gi|323693976|ref|ZP_08108161.1| prolyl-tRNA synthetase [Clostridium symbiosum WAL-14673] gi|323501976|gb|EGB17853.1| prolyl-tRNA synthetase [Clostridium symbiosum WAL-14673] Length = 477 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/333 (21%), Positives = 133/333 (39%), Gaps = 67/333 (20%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAY 161 M PT E + D + I+SYR+LP + Q +++ RP +RSREFL ++ + Sbjct: 110 MCVRPTSETLFCDFYARDIQSYRDLPRLYNQWCSVVRWEKTTRP---FLRSREFLWQEGH 166 Query: 162 SFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 + T E ++ M Y AD Sbjct: 167 TAHATAEQAEERTELMLNLY--------------------------------AD------ 188 Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARG 281 FC + + + TD + A Y + +H+ K S Sbjct: 189 FCEEVLAMPVVRGKKTDKEKFAGAE-------ATYTIEALMHDGKALQS----------- 230 Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 G FG ++ + D + YV S+G+ R++ A+I D G++ P Sbjct: 231 ---GTSHNFGDGFAKAFEIQYLDKDNQLKYVHQTSWGM-TTRLIGAIIMVHGDDNGLVLP 286 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +AP ++ ++ I+ + + D ++ LS G V DD + G +F+ +++ G P Sbjct: 287 PRIAPVQVMIVPIQQNKEGVLDKAYELKEVLS--GFKVKVDDSDKSPGWKFSESEMRGIP 344 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 ++V +G + +++++ + R T + +SL+E+ Sbjct: 345 VRVEIGPRDLAENQAVLVRRDTHEKITVSLDEI 377 >gi|58617659|ref|YP_196858.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] gi|73919787|sp|Q5FGP1|SYT_EHRRG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|58417271|emb|CAI28384.1| Threonyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] Length = 633 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 94/401 (23%), Positives = 159/401 (39%), Gaps = 62/401 (15%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 G I H KG+ + + ++N IR++ G IE+ P L S LW +SG +D + Sbjct: 261 GQIFWHEKGLIIY-----RIIENY---IRKKLENNGYIEVKTPYLLSKTLWEQSGHWDKF 312 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M L++ ++K + P + IF S I+SY++LP + R E G Sbjct: 313 REHMF-LSEIDNKVVAIKPMNCPCHVQIFNSKIRSYKDLPLRMAEFGTCHRYEASGALHG 371 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 +MR R F DA+ F T + K + ++ G K I ++ P G D Sbjct: 372 LMRVRSFTQDDAHIF-CTEDQIIEEALKFCNLLMEVYEVFGFKDILVKFSDRPEKRAGSD 430 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + D E + S + + N LN ++ + + Sbjct: 431 ------KIWDKAEEALKAS-------VKAAN--------LNYVLNPGDGAF------YGP 463 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI- 319 KL +L + +G + GT + LP + A + G+DGK H+ M I Sbjct: 464 KLEFTLKD---------AIGREWQCGTLQMDFVLPERLGAYYTGSDGKKHHPIMLHRAIL 514 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G + ++ H GK IW +AP ++S++ I D + K A + +V Sbjct: 515 GTIERFIGILIEHHSGKLPIW---LAPVQLSILTI-TEDAIDYAISLKHKAMKQNIRAEV 570 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D E+I + P+ I+G K + V I++ Sbjct: 571 --DITNEKINYKIRSHISKKIPVLWIIGKKEIETESVSIRY 609 >gi|15921730|ref|NP_377399.1| prolyl-tRNA synthetase [Sulfolobus tokodaii str. 7] gi|74581041|sp|Q971B5|SYP_SULTO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|15622517|dbj|BAB66508.1| 483aa long hypothetical prolyl-tRNA synthetase [Sulfolobus tokodaii str. 7] Length = 483 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 14/176 (7%) Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 FD++ + RV +++G + + G ++ + DG Y SYGI RV+A Sbjct: 215 FDTILPDSRV----LQIGTVHHLGQHFTKAFDFKIQRKDGSLDYPHQTSYGISD-RVIAV 269 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR----DACEKIYARLSKVGCDVFWDD 383 +I + D G + +AP K+ ++ I A D+ + +++ L G V DD Sbjct: 270 LIAINGDDHGPVLNPVIAPIKVVIVPIPAKDEETTAKIINYAKEVGENLKNRGITVVIDD 329 Query: 384 MGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT----GIREDMSLEEV 434 E+ G +F + +L G PL++ +G K ++++ V IK R T + +D ++EEV Sbjct: 330 DKEKTPGEKFYIWELKGVPLRIEIGPKELNNNTVYIKRRDTFEGKSVPKDKAVEEV 385 >gi|152996743|ref|YP_001341578.1| tRNA synthetase class II (G H P and S) [Marinomonas sp. MWYL1] gi|150837667|gb|ABR71643.1| tRNA synthetase class II (G H P and S) [Marinomonas sp. MWYL1] Length = 395 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 84/399 (21%), Positives = 159/399 (39%), Gaps = 58/399 (14%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 Q + G+ W P G N+ +R + G E+ P L +LW SG D Y ++M Sbjct: 18 QQAPGMLFWHPNGWHLFQNIQEHMRRCYRQYGFKEVRTPQLMKKELWHISGHMDMYAQDM 77 Query: 94 LRLADRN-DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 ++N D+ P +++ + SYR+LP ++ L R+E G +R Sbjct: 78 FFGGEQNGDQEYALKPMSCPAHILMYKRGVHSYRDLPLKLFEFGLVHRNESSGSLNGCLR 137 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R+F DA+ F + K + +I++ G +++ ++ + P +G D S Sbjct: 138 LRQFTQDDAHVFCAWSQ-VKQEVGQFLQRAKQIYNDYGYQALEVKISTQPEKALGDDASW 196 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 ++D + +EN FD + + Y ++ L Sbjct: 197 RR-------------AEDILKEACQAENVPFDIQVGEGAF-------YGPKIEL---ALQ 233 Query: 269 DSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY---VQMGSYGIG 320 D+ VG I+ GT ++LP F GK + YG Sbjct: 234 DA-------------VGRIWQCGTIQLDFNLPDRFELEFDNEQGKAEQPIILHQAVYG-S 279 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 R + ++E S +G++ P+ + P ++L+++ +D V D ++ A L + G +V Sbjct: 280 IERWIGILLEVS---QGVL-PEWIHPQPVALVSV--NDSVL-DYANQLRAELEQQGINVS 332 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +G + + L P +I+G + K+ I+ Sbjct: 333 CEFGDHSVGRKIKRSFELKIPNIIIIGEQEAQAGKLTIR 371 >gi|238898885|ref|YP_002924567.1| threonine tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259516538|sp|C4K776|SYT_HAMD5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229466645|gb|ACQ68419.1| threonine tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 638 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 82/391 (20%), Positives = 148/391 (37%), Gaps = 42/391 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W G + +IRE+ E+ P + LW ++G +++Y + Sbjct: 257 QEEAPGMVFWHENGWIVFRELEILIREKLKEYEYQEVKGPFMMDRVLWEKTGHWENYSEN 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N + I P + +IF+ +KSYR+LP + R+E G+MR Sbjct: 317 MFTTLSENREYCI-KPMNCPGHLEIFKQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLMR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F + K N + ++Y I+ G K I ++ + P S E Sbjct: 376 VRGFTQDDAHIFCTEKQVRKEVSNCIKMTY-DIYQTFGFKKIAVKLSTRPEKRIGSDEIW 434 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 A+ V + P E + I L+D L Sbjct: 435 TQAEEDLASVLKEQGITFELQPGEGAFYGPKIEFT--------------------LYDCL 474 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAV 328 R + G + +SLP ++A + + + M I G++ + Sbjct: 475 D-------RAWQCGTV---QLDFSLPVRLNAFYIDENSERQVPVMIHRAILGSIERFIGI 524 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G +W +AP ++ LINI D +K+ L ++G D E+I Sbjct: 525 LTEEYAGFFPVW---LAPVQVMLINITEKQS---DYVKKVAKNLQQLGVRAKVDLRNEKI 578 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 G + L P ++ G K V +++ ++ Sbjct: 579 GFKIRQHTLYRIPYILVCGDKEVESNQIAVR 609 >gi|118415374|gb|ABK83793.1| prolyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] Length = 502 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 79/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ T + +P + + L E + + E+ Sbjct: 62 KGCMILRPYGYALWENMQKVMDEKLKATSHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 121 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 122 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 178 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 179 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 212 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 213 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 248 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 249 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 297 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 298 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 356 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 357 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 402 >gi|299533556|ref|ZP_07046932.1| threonyl-tRNA synthetase [Comamonas testosteroni S44] gi|298718462|gb|EFI59443.1| threonyl-tRNA synthetase [Comamonas testosteroni S44] Length = 639 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 88/390 (22%), Positives = 143/390 (36%), Gaps = 54/390 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I +HS G W P G V +R G E+ P + LW ++G +D Y + Sbjct: 255 IDEHSPGTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQILDKGLWEKTGHWDKYRE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M D + P + IF+ IKSYR+LP F + R+E G+M Sbjct: 315 NMF-TTDSEKREYALKPMNCPGHIIIFKQGIKSYRDLPLRFGEFGNCHRNEPTGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGDL 206 R R F D + F E + F S L +++ G +I R + P IG D Sbjct: 374 RVRAFTQDDGHIF--CTEDQIQAEVTAFTSLLQKVYADFGFTNILYRLSTRPEKRIGTDE 431 Query: 207 SHEFI--VLADTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSD 261 + + LA+ G C +++ P E + I +++ +W T Sbjct: 432 AWDKAENALAE-GLRASGCEFEYL----PGEGAFYGPKIEYTLKDALGREWQ---CGTIQ 483 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-G 320 V ++PE + A F G DG+ H M I G Sbjct: 484 VD-----PNMPER-----------------------LDAEFVGEDGERHRPIMLHRAILG 515 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDV 379 ++ ++ H G W +AP + +++NI A ++ +K+ L V Sbjct: 516 SLERFIGILVEHHSGALPAW---LAPVQAAVLNITDAQADYAQEVAQKLQKALPNQSLRV 572 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 D E+I + + P ++ G K Sbjct: 573 VTDLRNEKITYKIREHSMQKLPYILVAGDK 602 >gi|162382786|ref|YP_893300.2| prolyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|225862437|ref|YP_002747815.1| prolyl-tRNA synthetase [Bacillus cereus 03BB102] gi|229182781|ref|ZP_04310021.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1] gi|152074740|sp|A0R9A0|SYP2_BACAH RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA ligase 2; Short=ProRS 2 gi|225785886|gb|ACO26103.1| proline--tRNA ligase [Bacillus cereus 03BB102] gi|228600754|gb|EEK58334.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1] Length = 476 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 79/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ T + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATSHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|332220153|ref|XP_003259222.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 1 [Nomascus leucogenys] Length = 718 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 103/434 (23%), Positives = 167/434 (38%), Gaps = 72/434 (16%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E R G E+ PT Sbjct: 296 EAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPT 355 Query: 74 LQSADLWVESGRYDSYGKEMLRL----ADRNDKA------------MIYGPTHEEVMTDI 117 L S LW +SG ++ Y ++M + +DR + + P + + Sbjct: 356 LFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLM 415 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-----GSK 171 F +S+R LP R E G+ R R F DA+ F T + S Sbjct: 416 FAHRPRSWRELPLRLADFGALHRAEASGSLRGLTRLRCFQQDDAHIFCTTDQLEAEIQSC 475 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + + + L RL L + P SG +G C D + Sbjct: 476 LDFLRSVYAVLGFSFRLALSTRP----SGFLGDP-----------------CLWDQAEQV 514 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 + +F + LNS A Y DVH L D+L R + G I Sbjct: 515 LKQALKEFGEPWDLNSGD---GAFYGPKIDVH---LHDAL-------GRPHQCGTI---Q 558 Query: 292 TKYSLPM--SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 + LP+ +KG G + V + +G+M + V+ S GK WP ++PF+ Sbjct: 559 LDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSMERLLGVLAESCGGK---WPLWLSPFQ 615 Query: 349 ISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + +I + ++ R+A + + A D D G + + A L + Q +VG Sbjct: 616 VVVIPVGTEQEEYAREAQQSLQAAGLVSDLDA---DSGLTLSRRIRQAQLAHYNFQFVVG 672 Query: 408 SKFVSDSKVEIKHR 421 K S V I+ R Sbjct: 673 QKEQSKRTVNIRTR 686 >gi|289578715|ref|YP_003477342.1| threonyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] gi|289528428|gb|ADD02780.1| threonyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] Length = 635 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 97/414 (23%), Positives = 160/414 (38%), Gaps = 52/414 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH G + P G + + R+E + G E+ P + + +LW SG +D Y K Sbjct: 254 IHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEELWRRSGHWDHY-K 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + +++S + SYR+LP ++ L R EL G+M Sbjct: 313 ENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCELGLVHRHELSGVLHGLM 372 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKM--FVSYL-RIFHRLGLKSIPMRAESGPIGGDLS 207 R R F DA+ F +TPE + + V Y +IF + R E+ +G D Sbjct: 373 RVRSFTQDDAHLF-MTPEQVEDEILGVINLVDYFYKIFGFEYFVELSTRPENS-MGSDED 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A + + + ++ P D A Y D H L Sbjct: 431 WELATNA------LISALNRVNLPYKVNEGD--------------GAFYGPKIDFH---L 467 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMR 323 DS+ R + G I F ++ L + G DG+ H + + G++ Sbjct: 468 KDSI-------GRTWQCGTIQLDFQMPERFEL----EYIGPDGEKHRPIMLHRVIYGSIE 516 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +P +AP ++ ++ I + +Y RL + DD Sbjct: 517 RFIGILTEHFAGA---FPTWLAPVQVRVLPISDKHYAY---AQNVYGRLLENDIRAELDD 570 Query: 384 MGEQIGSQFAVADLL-GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+IG + A L P +IVG K V V ++ R G +SL E I Sbjct: 571 RNEKIGYKIREAQLQKKIPYMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIE 624 >gi|161349985|ref|NP_279476.2| prolyl-tRNA synthetase [Halobacterium sp. NRC-1] gi|169235366|ref|YP_001688566.1| prolyl-tRNA synthetase [Halobacterium salinarum R1] gi|114152200|sp|Q9HS52|SYP_HALSA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|259511601|sp|B0R3A3|SYP_HALS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167726432|emb|CAP13217.1| proline--tRNA ligase [Halobacterium salinarum R1] Length = 501 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 77/350 (22%), Positives = 131/350 (37%), Gaps = 78/350 (22%) Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 WV G +D + RLA R PT E ++ ++S+R+LP Q Sbjct: 97 WVTQGGHDDLDQ---RLAVR--------PTSESIIAPYLSQWVRSHRDLPLRVNQWNSVV 145 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 R E R++EFL ++ ++ T E + Y R++ + IP+ Sbjct: 146 RWEATETKPFFRTKEFLWQEGHTAHATDEAAWAETTLRLDQYHRLYE--DVLGIPVLRGR 203 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 P H+ ADT +S+ ++ Sbjct: 204 KP-----DHDKFPGADT-------------------------TMSVEAL----------- 222 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 +P+ K V G + G ++ TF D + S+G+ Sbjct: 223 -----------MPDGKSVQG-----GTSHHLGQSFADAFDITFADEDEAERTAYTTSWGL 266 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK----IYARLSKV 375 + R + A++ S D +G++ P +VAP ++ ++ I D +D E+ I A L Sbjct: 267 -SWRAIGALVMSHSDDQGLVLPPTVAPKQVVIVPIWQED--TKDDVEQYGAEIAAELEAQ 323 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 G V +DD G G +F +L G P++ +G V D +V + HR G Sbjct: 324 GVRVHFDDRDGRNPGFKFNEWELNGVPVRFEIGPNEVEDDEVTVVHRPDG 373 >gi|194334392|ref|YP_002016252.1| prolyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] gi|259511613|sp|B4S9D5|SYP_PROA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|194312210|gb|ACF46605.1| prolyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] Length = 481 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/339 (20%), Positives = 137/339 (40%), Gaps = 75/339 (22%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ I+SYR+LP Q R E+R R +R+ EFL ++ ++ T Sbjct: 108 PTSETIIWSSYKKWIQSYRDLPILINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHATS 166 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++ +M ++ + F ++++ Sbjct: 167 TEAQEEVMRM-INVYKTF--------------------------------------AEEY 187 Query: 228 MDFPI----PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 M P+ +E+ F VE W +++ ++K+ ++ Sbjct: 188 MALPVIMGRKTESEKF------AGAVETWC--------------IEAMMQDKK----ALQ 223 Query: 284 VGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDS 343 G G ++ F+ +G YV S+G+ + R++ A+I + D +G++ P Sbjct: 224 AGTSHNLGQNFAKAFDCRFQSKEGALEYVWATSWGV-STRLIGALIMAHSDDRGLVLPPK 282 Query: 344 VAPFKISLINIKAHD-QVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVADLLGFP 401 +A ++ +I I D + I A L++ G F DD + G +FA +L G P Sbjct: 283 LATRQVVIIPILKGDISAVIEKARSIAAELNQKGIAAFVDDSDQNSPGWKFAEYELQGIP 342 Query: 402 LQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEVIN 436 +++ +G + + S R TG ++ D SL + IN Sbjct: 343 VRLELGPRDIQSSTCIAARRDTGEKSKLQLDSSLADQIN 381 >gi|238063301|ref|ZP_04608010.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149] gi|237885112|gb|EEP73940.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149] Length = 468 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 69/334 (20%), Positives = 138/334 (41%), Gaps = 62/334 (18%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 ++ PT E V+ + I SYR+LP Q R ELRPR +R+ EFL ++ ++ Sbjct: 104 VVVRPTSETVIGEFMAKWIDSYRDLPLLLNQWANVVRWELRPRI-FLRTSEFLWQEGHTA 162 Query: 164 DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 T ++ +Y + RI H ++E +++ Sbjct: 163 HATSSDAR-AYAR------RILHE-------------------AYEDLMV---------- 186 Query: 224 SKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + + P+ ++ L ++ E++ AT+ E + + ++ Sbjct: 187 --NVLGIPV---------VVGLKTVRERFAG---ATATYTCEGMMGD--------GKALQ 224 Query: 284 VGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDS 343 +G G ++ ++ A+G + S+G + R++ +I + D G+ P Sbjct: 225 LGTSHELGQNFAKAFDISYSSAEGGREHAWTTSWGT-STRMLGGLIMAHGDDNGLRVPPR 283 Query: 344 VAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV-ADLLGFPL 402 +AP + ++ +KA D V +A K+ L G V DD + + AV A+L G+P+ Sbjct: 284 LAPVQAYVMVVKAGDGVG-EAAAKLCDALRDAGVRVALDDRTDTPFGRRAVDAELRGYPV 342 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V VG + ++ + R G + + +V+ Sbjct: 343 RVEVGPRDLAAGNAVVVRRTDGSKSPTPVADVVG 376 >gi|153855829|ref|ZP_01996815.1| hypothetical protein DORLON_02836 [Dorea longicatena DSM 13814] gi|149751870|gb|EDM61801.1| hypothetical protein DORLON_02836 [Dorea longicatena DSM 13814] Length = 645 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 87/420 (20%), Positives = 162/420 (38%), Gaps = 47/420 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ + G +LP G + + RE + G +E+S P + S LW SG +D Y Sbjct: 256 MMCEEGPGFPFFLPKGMVLKNTLLDYWRELHKKAGYVEVSTPIILSRHLWETSGHWDHY- 314 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + + + P + ++++ +SY++LP ++ L R E + G+ Sbjct: 315 KENMYTTQIDGEDFAIKPMNCPGGMLVYKAEPRSYKDLPLRVGELGLVHRHEKSGQLHGL 374 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 MR R F DA+ F + PE + + ++ G K + R E +G D Sbjct: 375 MRVRCFTQDDAHIF-MMPEQIRDEIKGVVALIDEVYQLFGFKYHVELSTRPEDS-MGSDE 432 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E G +D+ + + F Y D H Sbjct: 433 DWELATEGLRGALNDLG----LDYVVNEGDGAF----------------YGPKIDFH--- 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RV 324 L DS+ + +++ F +Y+ GADG+ H + + G++ R Sbjct: 470 LTDSIGRTWQCGTIQLDMQLPQRFELEYT--------GADGEKHRPIMIHRVAFGSIERF 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 + +IE +P +AP ++ ++ I + +K+ L+ G D Sbjct: 522 IGILIEHFAGA----FPTWLAPVQVKVLPISDKH---LEYGQKVLDTLNAAGIRAEIDTR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + A + P ++VG+K ++ V ++ R G SL+E + + + Sbjct: 575 AEKIGYKIREAQMQKIPYMLVVGAKEEEENLVSVRSRFAGDEGQKSLDEFVASVTEEIAT 634 >gi|110802298|ref|YP_699583.1| threonyl-tRNA synthetase [Clostridium perfringens SM101] gi|123047184|sp|Q0SQM4|SYT_CLOPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|110682799|gb|ABG86169.1| threonine--tRNA ligase [Clostridium perfringens SM101] Length = 643 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 89/409 (21%), Positives = 159/409 (38%), Gaps = 44/409 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G + + + I +E+ R G + P + +DL+ SG +D Y M L Sbjct: 259 QGLPLLMPKGARIIQTLQRWIEDEEQRRGYVLTKTPLMAKSDLYKISGHWDHYKDGMFVL 318 Query: 97 ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D + ++ P I+ S SYR+LP F + FR+E G++R R Sbjct: 319 GDEEKDSEVFALRPMTCPFQYAIYNSTQHSYRDLPVRFAETSTLFRNESSGEMHGLIRVR 378 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 +F + D + TPE + + + LG I D+++ F Sbjct: 379 QFTLADGHIV-CTPEQLEDEFKNTVDLVKYVMETLG------------IADDITYRFSKW 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTD--FDDIISLNSI----VEQWTAPYAATSDVHNEKL 267 D T+ +++ P ENT +I++ +I + A Y D+ + + Sbjct: 426 -DPNNTE-----KYINDPEAWENTQNIMREILNHLNIDFTEADDEAAFYGPKLDIQFKNV 479 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 K + I++ F M K + K Y+ S IG A Sbjct: 480 -----HGKEDTIITIQID----FALAERFGMYYIDKDGEKKRPYIIHRS-SIGCYERTLA 529 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G W +AP + ++ + D+ D ++ L + G V D E+ Sbjct: 530 MLIEKYAGALPTW---IAPVQAKVLPLS--DKYA-DYANEVVEELRRRGVRVEADHRAEK 583 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 IG + A L P ++VG K + +V ++ R G M L + +N Sbjct: 584 IGYKIREARLERTPYILVVGEKEAENKEVSVRSRKNGEEGAMPLADFVN 632 >gi|296187094|ref|ZP_06855492.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296048288|gb|EFG87724.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 560 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 100/438 (22%), Positives = 174/438 (39%), Gaps = 54/438 (12%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +H+ G + P G + + RE + Sbjct: 153 YLNMLEEAKKRDHRKLGKELDLFS--MHEEGPGFPFFHPKGMIIRNTLQNFWREMHSAAD 210 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y KE + +++ P + ++++ I SY Sbjct: 211 YDEIMTPVILNEKLWRQSGHWDHY-KENMYFTKIDNEDYAIKPMNCPGSILVYKNTIHSY 269 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN--KMFVSYL 182 R LP + ++ L R E G+MR R F DA+ F + N K+ + Sbjct: 270 RELPLRYAEMGLAHRHEKSGALHGLMRVRCFTQDDAHMFLAKDNITDEIVNVIKLIDDFY 329 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++F + R E +G D E A G + D Sbjct: 330 KVFGFEYFVELSTRPEDS-MGSDEDWE---AATNGLRKAL------------------DT 367 Query: 243 ISLNSIVEQWT-APYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPM 298 I L V + A Y D H L D + R + G + F ++ L Sbjct: 368 IGLKYKVNEGDGAFYGPKIDFH---LRDCI-------GRTWQCGTVQLDFQMPERFDL-- 415 Query: 299 SATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ GADG+ H V + G++ ++ + G +P +AP ++ ++NI Sbjct: 416 --TYIGADGEKHRPVMVHRVVFGSVERFIGILIEHYAGA---FPAWLAPVQVKIMNI-TD 469 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 DQ+ D K+ L K V D E+IG + A L P +++G K + ++ V Sbjct: 470 DQI--DYANKVAKELKKNKIRVEVDLRNEKIGYKIREAQLQKVPYMLVLGDKEMKENTVA 527 Query: 418 IKHRLTGIREDMSLEEVI 435 ++ R G M+L++ + Sbjct: 528 VRSRKLGDLGAMALDQFV 545 >gi|269123175|ref|YP_003305752.1| threonyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] gi|268314501|gb|ACZ00875.1| threonyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] Length = 633 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 91/421 (21%), Positives = 179/421 (42%), Gaps = 67/421 (15%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + L I +H G ++P G + + + + R E N+ G E+ P Sbjct: 235 EAEKRDHRKLGKQLNLFFIDEHGPGFPFFMPKGMRLFNRLQQLWRIEHNKQGYDEIRTPI 294 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + +LW SG + +Y +E + +++ ++K P + +++++ SY++LP + Sbjct: 295 MLDKELWEISGHWFNY-RENMYVSEIDEKVYAIKPMNCPGSIIAYKNNLHSYKDLPLKYA 353 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG--- 189 ++ R E G+MR R F DA+ F TP+ K S ++ Y + + G Sbjct: 354 EMGHVHRHEFSGALHGLMRVRAFTQDDAHVF-CTPDQIKDSIKEIVNLYDKYYKLFGFDF 412 Query: 190 ---LKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFDDIISL 245 L + P +A G+ +V+ S+ ++ + N D+ Sbjct: 413 HVELSTKPEKA------------------VGDAKVWEISERALEETLKELNIDY------ 448 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSA 300 I A Y D K+ DS +G I+ GT +LP + Sbjct: 449 -RINAGDGAFYGPKIDF---KMKDS-------------IGRIWQTGTIQLDMNLPKRFNM 491 Query: 301 TFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 ++ G DG+ H M + G++ ++ + G +W +AP ++ ++ I A +Q Sbjct: 492 SYIGKDGEKHETVMIHRAMFGSLERFIGILIEHYAGAFPVW---LAPTQVKIMTISA-EQ 547 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEI 418 V + K++ +L +G D E+IG + A+ P+Q+++G V ++ V + Sbjct: 548 V--EYATKLHKKLIDLGIYSELDIRDEKIGYKIREANGEQKIPVQLVIGKNEVLENTVNV 605 Query: 419 K 419 + Sbjct: 606 R 606 >gi|257091083|ref|ZP_05585444.1| threonyl-tRNA synthetase [Enterococcus faecalis CH188] gi|256999895|gb|EEU86415.1| threonyl-tRNA synthetase [Enterococcus faecalis CH188] Length = 645 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 82/389 (21%), Positives = 159/389 (40%), Gaps = 40/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ R G + P + +L+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEIRLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 382 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 427 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 484 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 536 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + P Q++VG K + D+ V ++ Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVR 617 >gi|194467309|ref|ZP_03073296.1| threonyl-tRNA synthetase [Lactobacillus reuteri 100-23] gi|194454345|gb|EDX43242.1| threonyl-tRNA synthetase [Lactobacillus reuteri 100-23] Length = 601 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 84/405 (20%), Positives = 163/405 (40%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I + + G + P L + D + SG ++ Y +M Sbjct: 217 GLPYWLPKGATIRRTIERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWEHYRDDMFPPM 276 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + +++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 277 DMGDGEMLELRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRYEKSGALSGLQRVREM 336 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F +T + + + K+ + ++ + R + L D Sbjct: 337 TLNDGHTF-VTLDQIRSEFAKILKLIMSVYEDFDITDYSFR--------------LSLRD 381 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M S D ++L+ E A Y D+ + +L + Sbjct: 382 PKNVKKYYANDEMWEKSQSMLKSAMDDLNLDYYEAEGEAAFYGPKLDIQTKT---ALGND 438 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F ++ L ++ G DGK+H M G +G M A + + Sbjct: 439 ETMSTIQLD----FMLPERFGL----SYVGQDGKEHQPVMIHRGVVGTMERFMAYLTEIY 490 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N +AH + + +K+ A +V D E++G + Sbjct: 491 KGAFPTW---LAPEQVHIIPVNEEAHGEYADNLAKKMKAANIRVNV----DHRNEKMGYK 543 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A P ++VG +++ V ++ + +MS E +N Sbjct: 544 IREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMSQEAFMN 588 >gi|18311304|ref|NP_563238.1| threonyl-tRNA synthetase [Clostridium perfringens str. 13] gi|110801319|ref|YP_697012.1| threonyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|168205151|ref|ZP_02631156.1| threonyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|168210374|ref|ZP_02635999.1| threonyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|168213233|ref|ZP_02638858.1| threonyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|168216713|ref|ZP_02642338.1| threonyl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|182625789|ref|ZP_02953556.1| threonyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|22654117|sp|Q8XI02|SYT_CLOPE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123148532|sp|Q0TMX8|SYT_CLOP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|18145987|dbj|BAB82028.1| threonine-tRNA ligase [Clostridium perfringens str. 13] gi|110675966|gb|ABG84953.1| threonyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|170663286|gb|EDT15969.1| threonyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|170711530|gb|EDT23712.1| threonyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|170715283|gb|EDT27465.1| threonyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|177908945|gb|EDT71432.1| threonyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|182381219|gb|EDT78698.1| threonyl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 643 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 89/409 (21%), Positives = 159/409 (38%), Gaps = 44/409 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G + + + I +E+ R G + P + +DL+ SG +D Y M L Sbjct: 259 QGLPLLMPKGARIIQTLQRWIEDEEQRRGYVLTKTPLMAKSDLYKISGHWDHYKDGMFVL 318 Query: 97 ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D + ++ P I+ S SYR+LP F + FR+E G++R R Sbjct: 319 GDEEKDSEVFALRPMTCPFQYAIYNSTQHSYRDLPVRFAETSTLFRNESSGEMHGLIRVR 378 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 +F + D + TPE + + + LG I D+++ F Sbjct: 379 QFTLADGHIV-CTPEQLEDEFKNTVDLVKYVMETLG------------IADDITYRFSKW 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTD--FDDIISLNSI----VEQWTAPYAATSDVHNEKL 267 D T+ +++ P ENT +I++ +I + A Y D+ + + Sbjct: 426 -DPNNTE-----KYINDPEAWENTQNIMREILNHLNIDFTEADDEAAFYGPKLDIQFKNV 479 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 K + I++ F M K + K Y+ S IG A Sbjct: 480 -----HGKEDTIITIQID----FALAERFGMYYIDKDGEKKRPYIIHRS-SIGCYERTLA 529 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G W +AP + ++ + D+ D ++ L + G V D E+ Sbjct: 530 MLIEKYAGALPTW---IAPVQAKVLPLS--DKYA-DYANEVVEELRRRGVRVEADHRAEK 583 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 IG + A L P ++VG K + +V ++ R G M L + +N Sbjct: 584 IGYKIREARLERTPYILVVGEKEAENKEVSVRSRKNGEEGAMPLADFVN 632 >gi|196045229|ref|ZP_03112461.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108] gi|196023813|gb|EDX62488.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108] Length = 476 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 79/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ T + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKATSHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E +S++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 376 >gi|254369559|ref|ZP_04985570.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] gi|157122513|gb|EDO66648.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] Length = 634 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 79/382 (20%), Positives = 145/382 (37%), Gaps = 48/382 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S GI W G + V +R N+ G E+ P + LW +SG Y + Sbjct: 255 QEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSGHASKYAEN 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N I P + ++ + + SYR+LP + + R+E G++R Sbjct: 315 MFATKSENRDFAIR-PMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLR 373 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F TPE + M ++ G ++ P IG D + Sbjct: 374 VRSFTQDDGHIF-CTPEQVEEEVILMVQQCFEVYKDFGFNDFAVKIALRPENRIGDDETW 432 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + S+ + + + N ++ + A Y + H L Sbjct: 433 DK-------------SEQMLKNALDANNVSYE-------LFPGEGAFYGPKIEFH---LK 469 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 D++ R + G I +S+P + AT+ +G+ V + +G++ Sbjct: 470 DAI-------GRSWQCGTI---QLDFSMPQRLGATYIDKNGEKQVSVMLHRAIVGSLERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP +++++ I + D C++++ L K G D Sbjct: 520 IGMLIEHYAGNLPLW---LAPVQVAVMGISNNQD---DYCKEVFIMLEKNGIRAKLDLRN 573 Query: 386 EQIGSQFAVADLLGFPLQVIVG 407 E+IG + LL P VI+G Sbjct: 574 EKIGFKIREHTLLRVPYLVILG 595 >gi|115315107|ref|YP_763830.1| threonine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|122324891|sp|Q0BL41|SYT_FRATO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|115130006|gb|ABI83193.1| threonine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] Length = 634 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 79/382 (20%), Positives = 145/382 (37%), Gaps = 48/382 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S GI W G + V +R N+ G E+ P + LW +SG Y + Sbjct: 255 QEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSGHASKYAEN 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N I P + ++ + + SYR+LP + + R+E G++R Sbjct: 315 MFATKSENRDFAIR-PMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLR 373 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F TPE + M ++ G ++ P IG D + Sbjct: 374 VRSFTQDDGHIF-CTPEQVEEEVILMVQQCFEVYKDFGFNDFAVKIALRPENRIGDDETW 432 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + S+ + + + N ++ + A Y + H L Sbjct: 433 DK-------------SEQILKNALDANNVSYE-------LFPGEGAFYGPKIEFH---LK 469 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 D++ R + G I +S+P + AT+ +G+ V + +G++ Sbjct: 470 DAI-------GRSWQCGTI---QLDFSMPQRLGATYIDKNGEKQVSVMLHRAIVGSLERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP +++++ I + D C++++ L K G D Sbjct: 520 IGMLIEHYAGNLPLW---LAPVQVAVMGISNNQD---DYCKEVFIMLEKNGIRAKLDLRN 573 Query: 386 EQIGSQFAVADLLGFPLQVIVG 407 E+IG + LL P VI+G Sbjct: 574 EKIGFKIREHTLLRVPYLVILG 595 >gi|77919019|ref|YP_356834.1| threonyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] gi|123770467|sp|Q3A4P3|SYT_PELCD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77545102|gb|ABA88664.1| Ser-tRNA(Thr) hydrolase [Pelobacter carbinolicus DSM 2380] Length = 638 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 93/414 (22%), Positives = 156/414 (37%), Gaps = 45/414 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R E R G + P + DLW SG +D+Y +E + Sbjct: 265 GLVIWHPKGALLRTLLEDFERREHLRRGYDIVMGPQILRTDLWKTSGHFDNY-RENMYFT 323 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + + P + I+++ +SYR+LP ++++ R E G++R R F Sbjct: 324 DVDGQGYGIKPMNCLAHMLIYKARQRSYRDLPLRYFELGTVHRHEKSGVLHGLLRVRGFT 383 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFIVL 213 DA+ TP+ ++ + G + I R E IG D Sbjct: 384 QDDAHII-CTPDQLDEEIKRVLEFVRDVMAIFGFEYEIEISTRPEKS-IGSD-------- 433 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 AD D +P + + D A Y D+ KL D+L Sbjct: 434 ADWERATGALMNALKDLELPHDVNEGD------------GAFYGPKIDI---KLKDAL-- 476 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESS 332 ++R I+ F ++ L T+ G DG+ H V + +GA+ V+ Sbjct: 477 DRRWQCATIQCD--FTLPERFDL----TYVGKDGEKHRPVMLHRVILGAIERFIGVLIEH 530 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 + G +W +AP + +IN+ + D + + L G V D E++G + Sbjct: 531 YAGNFPLW---LAPVQAVVINVTDNQA---DYAKSVSDALRAAGVRVQCDLRNEKLGFKI 584 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 A + P ++VG +SD V + R E MS E+ + R Sbjct: 585 REAQVDKIPYMLVVGDTEMSDGTVAPRFRSGKNLEPMSPEDFARFVQEECDQYR 638 >gi|330977708|gb|EGH77611.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 477 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 14/209 (6%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + Y L I + RD K+ R G+ H + + G+ W P G + +R+ Q Sbjct: 229 AAYILRIEKAEKRD----HRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQ 284 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G +E+ P + LW +SG + +Y M + I P + +F Sbjct: 285 RENGYLEIKTPQVVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQG 343 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP + R+E G+MR R F DA+ F E + + F+ Sbjct: 344 LKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIK 401 Query: 181 Y-LRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G K I ++ + P +G D Sbjct: 402 LTLDVYADFGFKDIELKLSTRPEKRVGSD 430 >gi|89256700|ref|YP_514062.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|156502860|ref|YP_001428925.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010452|ref|ZP_02275383.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC200] gi|254368007|ref|ZP_04984027.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica 257] gi|290954131|ref|ZP_06558752.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|295312449|ref|ZP_06803221.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|122999730|sp|Q2A2J0|SYT_FRATH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223341|sp|A7NDB6|SYT_FRATF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|89144531|emb|CAJ79846.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|134253817|gb|EBA52911.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica 257] gi|156253463|gb|ABU61969.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 634 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 79/382 (20%), Positives = 145/382 (37%), Gaps = 48/382 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S GI W G + V +R N+ G E+ P + LW +SG Y + Sbjct: 255 QEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSGHASKYAEN 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N I P + ++ + + SYR+LP + + R+E G++R Sbjct: 315 MFATKSENRDFAIR-PMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLR 373 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F TPE + M ++ G ++ P IG D + Sbjct: 374 VRSFTQDDGHIF-CTPEQVEEEVILMVQQCFEVYKDFGFNDFAVKIALRPENRIGDDETW 432 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + S+ + + + N ++ + A Y + H L Sbjct: 433 DK-------------SEQILKNALDANNVSYE-------LFPGEGAFYGPKIEFH---LK 469 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 D++ R + G I +S+P + AT+ +G+ V + +G++ Sbjct: 470 DAI-------GRSWQCGTI---QLDFSMPQRLGATYIDKNGEKQVSVMLHRAIVGSLERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP +++++ I + D C++++ L K G D Sbjct: 520 IGMLIEHYAGNLPLW---LAPVQVAVMGISNNQD---DYCKEVFIMLEKNGIRAKLDLRN 573 Query: 386 EQIGSQFAVADLLGFPLQVIVG 407 E+IG + LL P VI+G Sbjct: 574 EKIGFKIREHTLLRVPYLVILG 595 >gi|300771911|ref|ZP_07081782.1| proline--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] gi|300761297|gb|EFK58122.1| proline--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] Length = 490 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 5/158 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F +GK +V S+G+ + R++ A+I + D +G+ Sbjct: 232 GKALQAGTSHFLGQNFAKAFDVKFTSKEGKQEHVWASSWGV-STRLMGALIMAHSDDQGL 290 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDA---CEKIYARLSKVGCDVFWDDMGEQ-IGSQFAV 394 + P +AP ++ ++ I D+ + + + A L V +DD Q G +FA Sbjct: 291 VLPPMLAPVQVVIVPIYRTDEEKTNIDVFVDGLSAELKAKNISVKYDDRDTQRPGFKFAE 350 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +L G PL+V VG++ + + VE+ R T +E +S E Sbjct: 351 WELKGVPLRVAVGARDMQNGTVELARRDTQTKETVSQE 388 Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +R I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 114 EEELIVRPTSETIIWNTYRGWIESYRDLPILVNQWANVVRWEMRTRL-FLRTAEFLWQEG 172 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T + + KM Y Sbjct: 173 HTAHATSQEAIEETEKMLGVY 193 >gi|218506382|ref|ZP_03504260.1| prolyl-tRNA synthetase [Rhizobium etli Brasil 5] Length = 37 Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats. Identities = 26/37 (70%), Positives = 33/37 (89%) Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG 107 +PTLQSA+LW ESGRYD+YGKEMLR+ DR ++ M+YG Sbjct: 1 MPTLQSAELWQESGRYDAYGKEMLRIKDRQERPMLYG 37 >gi|314933837|ref|ZP_07841202.1| threonine--tRNA ligase [Staphylococcus caprae C87] gi|313653987|gb|EFS17744.1| threonine--tRNA ligase [Staphylococcus caprae C87] Length = 645 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 87/405 (21%), Positives = 169/405 (41%), Gaps = 41/405 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + DL+ SG +D Y +M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQDDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ + M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 KLDETEEMVLRPMNCPHHMMIYNNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + D++ F + P+ K + ++ ++ G K R + P + + + Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIQEVYEDFGFKDYTFRLSYRDPEDKEKYMDDDEMW 440 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + E+ + + D M P + +I E A Y DV ++ ++ + Sbjct: 441 NKAESMLKEAVDEMGLPY------------VEAIGE--AAFYGPKLDV---QVKTAMGKE 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G+DG+ H + G+ + R VA + E + Sbjct: 484 ETLSTAQLD----FLLPERFEL----TYIGSDGEQHRPVVIHRGVVSTMERFVAFLTEET 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ +I N+ H D ++ L G V DD E++G Sbjct: 536 ---KG-AFPTWLAPKQVEIIPVNVDLH----YDYARQLQDELKSQGVRVEIDDRNEKMGY 587 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 588 KIREAQMQKIPYQIVVGDKEVENNEVNVRQYGSQDQETLEKDEFI 632 >gi|227543651|ref|ZP_03973700.1| threonine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300908708|ref|ZP_07126171.1| threonine--tRNA ligase [Lactobacillus reuteri SD2112] gi|227186362|gb|EEI66433.1| threonine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300894115|gb|EFK87473.1| threonine--tRNA ligase [Lactobacillus reuteri SD2112] Length = 627 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 84/405 (20%), Positives = 163/405 (40%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I + + G + P L + D + SG ++ Y +M Sbjct: 243 GLPYWLPKGATIRRTIERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWEHYRDDMFPPM 302 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + +++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 303 DMGDGEMLELRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRYEKSGALSGLQRVREM 362 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F +T + + + K+ + ++ + R + L D Sbjct: 363 TLNDGHTF-VTLDQIRSEFAKILKLIMSVYEDFDITDYSFR--------------LSLRD 407 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M S D ++L+ E A Y D+ + +L + Sbjct: 408 PKNVKKYYANDEMWEKSQSMLKSAMDDLNLDYYEAEGEAAFYGPKLDIQTKT---ALGND 464 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F ++ L ++ G DGK+H M G +G M A + + Sbjct: 465 ETMSTIQLD----FMLPERFGL----SYVGQDGKEHQPVMIHRGVVGTMERFMAYLTEIY 516 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N +AH + + +K+ A +V D E++G + Sbjct: 517 KGAFPTW---LAPEQVHIIPVNEEAHGEYADNLAKKMKAANIRVNV----DHRNEKMGYK 569 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A P ++VG +++ V ++ + +MS E +N Sbjct: 570 IREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMSQEAFMN 614 >gi|163782015|ref|ZP_02177014.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159882547|gb|EDP76052.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 641 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 90/422 (21%), Positives = 158/422 (37%), Gaps = 61/422 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + +EE + G + P + + LW SG + Y M Sbjct: 266 GLVLWLPRGSIYRKVLEDYWKEEHIKRGYQFVYTPHVGKSKLWEISGHLECYKPNMFPAM 325 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + P + I++S ++SY++LP ++ +R E+ G++R R F Sbjct: 326 EMEGEEYYVKPMNCPFHIAIYKSKVRSYKDLPVKLAELGTVYRYEMSGVLHGLLRVRGFT 385 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ TPE L + G + + P IG D E Sbjct: 386 QDDAHII-CTPEQVDEVIRDTLDLALSMLKDFGFDDFKIYVSTRPEDAIGSDEQWEV--- 441 Query: 214 ADTGETQVFCSKDFMDFPIPSENT---DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 SEN +D+ I E A Y DV K+ D+ Sbjct: 442 --------------------SENALKKAVEDLGYTYEIDEGGGAFYGPKIDV---KIRDA 478 Query: 271 LPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRV 324 +G ++ T ++LP T+ G D K H M +G++ Sbjct: 479 -------------IGRLWQCSTIQFDFNLPERFDMTYVGPDNKKHRPYMIHRAFLGSIER 525 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +W ++P + ++ I H + R K+ +RL + G V D+ Sbjct: 526 FTGILLEHYAGLLPVW---LSPTQARIVPIADRHLEYGR----KVLSRLQEEGFRVDMDE 578 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E++ ++ A+L+ P ++VG + V V ++ + G MSLEE I + + Sbjct: 579 RDERMNAKIREAELMKIPYVLVVGDREVEAGTVSVRSKKEGNLGSMSLEEFIEHLREKVE 638 Query: 444 NN 445 Sbjct: 639 RK 640 >gi|317127978|ref|YP_004094260.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315472926|gb|ADU29529.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 478 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 73/331 (22%), Positives = 133/331 (40%), Gaps = 65/331 (19%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ IKSYR+LP Q FR E + +R+ EFL ++ ++ + Sbjct: 104 PTSETMIGHLYSKWIKSYRDLPVLINQWANVFRWE-KKTLPFIRTSEFLWQEGHTAHVDE 162 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPM-RAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 E ++ +M Y + GL +IP+ E P S F DT Sbjct: 163 EDARKETMQMLNIYKEVVE--GLLAIPVYDGEKTP-----SERFAGAVDT---------- 205 Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGH 286 S+ ++++ A A TS Sbjct: 206 ----------------YSIEAMMKDGKAVQAGTS-------------------------- 223 Query: 287 IFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 Y GTK++ + + K V S+G + R++ +VI D +G++ P +AP Sbjct: 224 -HYLGTKFAEAFDIKYLTRENKHENVHTTSWGT-STRLIGSVIMVHGDEQGLVLPPRIAP 281 Query: 347 FKISLINIK--AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 ++ LI + + D ++I+ L G V DD + G +F +L G P+++ Sbjct: 282 TQVVLIPVGPWKKNPAIIDKLDEIFVALKVKGIRVRLDDSDQSPGYKFNEWELKGVPVRI 341 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G + + ++V +K R + +SL+ V+ Sbjct: 342 ELGPRDLEGNQVMMKARDEREKLVVSLDTVV 372 >gi|229549033|ref|ZP_04437758.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|312904390|ref|ZP_07763551.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|229305826|gb|EEN71822.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|310632289|gb|EFQ15572.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|315162804|gb|EFU06821.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0645] gi|315576849|gb|EFU89040.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0630] Length = 660 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 90/417 (21%), Positives = 172/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ R G + P + +L+ SG +D Y ++M Sbjct: 277 GLPFWLPKGATIRRTIERYIVDKEIRLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 336 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 442 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 499 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 550 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 551 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 603 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 659 >gi|10580016|gb|AAG18956.1| proline-tRNA synthetase [Halobacterium sp. NRC-1] Length = 465 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 77/350 (22%), Positives = 131/350 (37%), Gaps = 78/350 (22%) Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 WV G +D + RLA R PT E ++ ++S+R+LP Q Sbjct: 61 WVTQGGHDDLDQ---RLAVR--------PTSESIIAPYLSQWVRSHRDLPLRVNQWNSVV 109 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 R E R++EFL ++ ++ T E + Y R++ + IP+ Sbjct: 110 RWEATETKPFFRTKEFLWQEGHTAHATDEAAWAETTLRLDQYHRLYE--DVLGIPVLRGR 167 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 P H+ ADT +S+ ++ Sbjct: 168 KP-----DHDKFPGADT-------------------------TMSVEAL----------- 186 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 +P+ K V G + G ++ TF D + S+G+ Sbjct: 187 -----------MPDGKSVQG-----GTSHHLGQSFADAFDITFADEDEAERTAYTTSWGL 230 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK----IYARLSKV 375 + R + A++ S D +G++ P +VAP ++ ++ I D +D E+ I A L Sbjct: 231 -SWRAIGALVMSHSDDQGLVLPPTVAPKQVVIVPIWQED--TKDDVEQYGAEIAAELEAQ 287 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 G V +DD G G +F +L G P++ +G V D +V + HR G Sbjct: 288 GVRVHFDDRDGRNPGFKFNEWELNGVPVRFEIGPNEVEDDEVTVVHRPDG 337 >gi|18313148|ref|NP_559815.1| prolyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2] gi|74580888|sp|Q8ZVQ9|SYP_PYRAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|18160660|gb|AAL63997.1| prolyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2] Length = 488 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 5/162 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + Y GT ++ T+ ADG SYGI + A +I DG G Sbjct: 226 GRSLQIGTVHYLGTNFTKVFEVTYLDADGTRKLAHTTSYGISERSIAAMLITHGDDG-GT 284 Query: 339 IWPDSVAPFKISLINIKAHDQ---VCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAV 394 P +AP ++ +I I ++ + + RL++ G V+ D+ ++ G +F Sbjct: 285 TLPPKLAPIQVVVIPIYYGEEEAPLVMPLVRETANRLNEAGIRVYVDERADKTPGWKFYY 344 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +L G PL+V +G + V + I R T + +S+ E+++ Sbjct: 345 WELKGVPLRVEIGKRDVEKRQAVIARRDTLEKYAVSINELVD 386 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 4/158 (2%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG Y W P G K NV +IR+ + TG E+ P + + ES + KE+ Sbjct: 40 KGAYVWRPYGMKIRRNVENLIRKFHDETGHEEVLFPVFIPYEFFGKESQHIKGFEKEVFW 99 Query: 96 LADRNDKA--MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 ++ + ++ PT E + + + I+ Y++LP YQI FR E + ++R R Sbjct: 100 VSKGGEAGERLVLRPTSETAIMPMVKLWIQDYKDLPLRVYQIVSVFRAETKMTHPMIRLR 159 Query: 154 EFLM-KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 E M K+A++ E ++ + Y RIF + L Sbjct: 160 EISMFKEAHTVHADKEDAERQVREAVEIYKRIFDEMCL 197 >gi|319898981|ref|YP_004159074.1| Threonyl-tRNA synthetase [Bartonella clarridgeiae 73] gi|319402945|emb|CBI76496.1| Threonyl-tRNA synthetase [Bartonella clarridgeiae 73] Length = 658 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 97/418 (23%), Positives = 167/418 (39%), Gaps = 52/418 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + G+ W P G K N+ + +R + E+ P + LW SG + Y + Sbjct: 260 QEEGPGMIFWHPKGWKMFQNLISYMRRRLDDHKYAEVQAPQVLDKSLWEVSGHWRWYKEN 319 Query: 93 MLRL---ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 M + AD + IY P + IF+ +KSYR+LP + L R E Sbjct: 320 MFKTIPAADDWNNEYIYALKPMNCPGHVQIFKHGLKSYRDLPIRLAEFGLVHRYEPSGSL 379 Query: 148 -GVMRSREFLMKDAYSFDLTPEGSKH--SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGG 204 G+MR+R F DA+ F + + S N + +S + G + I ++ + P Sbjct: 380 HGLMRARSFTQDDAHIFCTEEQLADECLSINDLILS---TYADFGFEEISLKLSTRP--- 433 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 E +V S + D +EN + S+ +E+ ++ S + Sbjct: 434 -------------EKRV-GSDELWDH---AENI----MTSVLKTIEKKSSGRVRISILPG 472 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTK---YSLP--MSATFKGADGKDHYVQMGSYGI 319 E F P+ + I G + GT ++LP A + D + M I Sbjct: 473 EGAFYG-PKFEYTLKDAI--GREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAI 529 Query: 320 -GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G+M ++ + G W +AP +I++ I + D +KI A+L +G Sbjct: 530 FGSMERFLGILIENFSGHMPFW---LAPQQIAVATITSD---ANDYAKKITAKLKAIGLS 583 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED-MSLEEVI 435 V D E+I + L P+ ++ G + + V ++ RL + + +SLEEVI Sbjct: 584 VILDSRNEKINYKIREHSLQKIPVILVCGKREAETNSVNMR-RLGSVEQSLLSLEEVI 640 >gi|288560211|ref|YP_003423697.1| prolyl-tRNA synthetase ProS [Methanobrevibacter ruminantium M1] gi|288542921|gb|ADC46805.1| prolyl-tRNA synthetase ProS [Methanobrevibacter ruminantium M1] Length = 468 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 3/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++G + G ++ TF+ +G Y YGI RV+AA I + D KG+ Sbjct: 212 GKTLQIGTVHNLGQTFAKTFEITFENKEGNHEYAYQTCYGISD-RVIAAAIAAHGDEKGL 270 Query: 339 IWPDSVAPFKISLINIKAHD--QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 I P +AP +I++I I D + C +I L G V D + G +F + Sbjct: 271 ILPPRIAPKQITIIPIIFKDGGEEVMAKCLEIKKSLESKGIRVQMDTRDIRPGKKFFDWE 330 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 L G PL+ +G + + ++ + R TG + ++SLE+ Sbjct: 331 LKGTPLRFELGPRDLKNNVAILGRRDTGEKIEISLED 367 >gi|223044090|ref|ZP_03614129.1| threonyl-tRNA synthetase [Staphylococcus capitis SK14] gi|222442484|gb|EEE48590.1| threonyl-tRNA synthetase [Staphylococcus capitis SK14] Length = 645 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 87/405 (21%), Positives = 169/405 (41%), Gaps = 41/405 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + DL+ SG +D Y +M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQDDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ + M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 KLDETEEMVLRPMNCPHHMMIYNNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + D++ F + P+ K + ++ ++ G K R + P + + + Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIQEVYEDFGFKDYTFRLSYRDPEDKEKYMDDDEMW 440 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + E+ + + D M P + +I E A Y DV ++ ++ + Sbjct: 441 NKAESMLKEAVDEMGLPY------------VEAIGE--AAFYGPKLDV---QVKTAMGKE 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G+DG+ H + G+ + R VA + E + Sbjct: 484 ETLSTAQLD----FLLPERFEL----TYIGSDGEQHRPVVIHRGVVSTMERFVAFLTEET 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ +I N+ H D ++ L G V DD E++G Sbjct: 536 ---KG-AFPTWLAPKQVEIIPVNVDLH----YDYARQLQDELKSQGVRVEIDDRNEKMGY 587 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 588 KIREAQMQKIPYQIVVGDKEVENNEVNVRQYGSQDQETLEKDEFI 632 >gi|227540188|ref|ZP_03970237.1| proline--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] gi|227240049|gb|EEI90064.1| proline--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] Length = 490 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 5/158 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F +GK +V S+G+ + R++ A+I + D +G+ Sbjct: 232 GKALQAGTSHFLGQNFAKAFDVKFTSKEGKQEHVWASSWGV-STRLMGALIMAHSDDQGL 290 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDA---CEKIYARLSKVGCDVFWDDMGEQ-IGSQFAV 394 + P +AP ++ ++ I D+ + + + A L V +DD Q G +FA Sbjct: 291 VLPPMLAPIQVVIVPIYRTDEEKANIDVFVDGLNAELKAKNISVKYDDRDTQRPGFKFAE 350 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +L G PL+V VG++ + + VE+ R T +E +S E Sbjct: 351 WELKGVPLRVAVGARDMQNDTVELARRDTQTKETVSQE 388 Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +R I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 114 EEELIVRPTSETIIWNTYRGWIESYRDLPILVNQWANVVRWEMRTRL-FLRTAEFLWQEG 172 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T + + KM Y Sbjct: 173 HTAHATSQEAIEETEKMLGVY 193 >gi|303325499|ref|ZP_07355942.1| threonine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] gi|302863415|gb|EFL86346.1| threonine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] Length = 648 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 92/409 (22%), Positives = 164/409 (40%), Gaps = 48/409 (11%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ WLP G + R+E + G + P L + W SG YD Y +E + Sbjct: 263 APGMVFWLPKGMLVRAILEDFWRKEHLKRGYDMVQGPQLLRVETWQRSGHYDHY-RENMY 321 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D A P + I+++ ++SYR+LP ++++ + R E G++R R+ Sbjct: 322 FTRIEDDAYGIKPMNCIAHMLIYKNELRSYRDLPQRYFELGVVHRHEKSGVLHGLLRVRQ 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFI 211 F DA+ PE + + + H G + ++ R ES IG D + E Sbjct: 382 FTQDDAHIL-CAPEQLEGEILGVIHLIRDLMHLFGFQYKVAVSTRPESS-IGTDEAWE-- 437 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 LA Q K + + I + + F Y DV +L D + Sbjct: 438 -LATNALIQA-VEKAGLPYEINAGDGAF----------------YGPKIDV---RLLDCI 476 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIE 330 + S ++ F ++ L T+ G DG+ H M I G++ V+ Sbjct: 477 GREWQCSTIQVD----FTLPERFDL----TYVGQDGERHRPVMVHRAIMGSLERFIGVLI 528 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + L+ + + E++ L +G V D E++G Sbjct: 529 EQYAGALPAW---LAPEQARLLTVT---EAGDATVERMRGELQALGIRVTADTRNEKLGF 582 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 + A + P ++VG K V V ++ R +G E++ L+ + + A+ Sbjct: 583 KVREAQVAKVPYILVVGEKEVQADGVNVRLR-SG--ENLGLKSIADVAA 628 >gi|148264672|ref|YP_001231378.1| threonyl-tRNA synthetase [Geobacter uraniireducens Rf4] gi|146398172|gb|ABQ26805.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Geobacter uraniireducens Rf4] Length = 645 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 99/410 (24%), Positives = 161/410 (39%), Gaps = 55/410 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+E R G + P + +LW SG YD+Y +E + Sbjct: 272 GLVIWHPKGAMLRTILEDFERKEHFRRGYDIVVGPQILKTELWQRSGHYDNY-RENMYFT 330 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +++ P + I++S ++SYR+LP ++++ R E G++R R F Sbjct: 331 EVDEQGYGIKPMNCLAHMMIYKSQLRSYRDLPLRYFELGTVHRHERAGVLHGLLRVRGFT 390 Query: 157 MKDAYSFDLTPE---GSKHSYNKMFVSYLRIF---HRLGLKSIPMRAESGPIGGDLSHEF 210 DA+ TPE G + IF + + L + P ++ IG D E Sbjct: 391 QDDAHIL-CTPEQLDGEIKGVLSFVKDVMGIFGFEYEMELSTRPEKS----IGSDEDWER 445 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A G Q D P E + D A Y D+ KL D+ Sbjct: 446 ATKALLGALQ--------DSGRPFEINEGD------------GAFYGPKIDI---KLRDA 482 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 L ++R I+ ++LP T+ GADG K V + +GA+ Sbjct: 483 L--DRRWQCATIQC--------DFTLPERFDLTYIGADGEKKRPVMVHRVILGAIERFIG 532 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 V+ G +W +AP + ++ + +QV +IY L G V D E+ Sbjct: 533 VLIEHFAGSFPVW---LAPVQAIVLTV-TDNQVS--YANEIYTALRAAGIRVQQDFRNEK 586 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +G + A L P +I+G K V V + R + M E+I + Sbjct: 587 LGFKIREAQLQKIPYMLIIGDKEVESGMVTPRFRDGNNLDSMKPAELIEF 636 >gi|126663528|ref|ZP_01734525.1| threonine--tRNA ligase (threonine tRNA synthetase) [Flavobacteria bacterium BAL38] gi|126624476|gb|EAZ95167.1| threonine--tRNA ligase (threonine tRNA synthetase) [Flavobacteria bacterium BAL38] Length = 633 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 81/402 (20%), Positives = 148/402 (36%), Gaps = 61/402 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G D + +++ Q + G ++ P + DL+V SG Y YG + + Sbjct: 246 QGLPLWLPKGAALRDRLEQFLKKAQKKAGYEQVVTPHIGMKDLYVTSGHYAKYGADSFQP 305 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + + P + +I+ + SY++LP + + +R E G+ R R Sbjct: 306 IHTPAEGEEFLLKPMNCPHHCEIYNARPWSYKDLPKRYAEFGTVYRYEQSGELHGLTRVR 365 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TP+ + + L +F LG Sbjct: 366 GFTQDDAHIF-CTPDQLDTEFKNVIDLVLYVFGSLG------------------------ 400 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 F +F D D+ VE W A +K + + E Sbjct: 401 -------------FENFTAQVSVRDLDNPDKYIGSVENWEKAENAIISAAKDKGLNYVIE 447 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP T+KG+D K H V + Sbjct: 448 AGEAAFYGPKLDFMVKDALGRSWQLGTIQVDYNLPERFELTYKGSDDKLHRPVMIHRAPF 507 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G+M A++ G IW + P + ++++ + + +K+ L Sbjct: 508 GSMERFIAILLEHTAGNFPIW---LMPEQAIILSL---SEKYENYAKKVLDLLENHEIRA 561 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D+ E IG + A++ +P +IVG + + + ++ R Sbjct: 562 LIDNRNETIGKKIREAEMNKYPFMLIVGEEEEKNGTISVRQR 603 >gi|229100656|ref|ZP_04231504.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-29] gi|229119259|ref|ZP_04248564.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock1-3] gi|228664184|gb|EEL19720.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock1-3] gi|228682749|gb|EEL36779.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-29] Length = 476 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FGT +S F +GK YV S+G+ + R++ +I D G+ Sbjct: 223 GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGLIMVHSDNNGL 281 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P VAP ++ ++ I H + + ++ R+ KV V D + G +F ++ Sbjct: 282 VMPPKVAPVQVVIVPIAQHKEGVLEKATELQGRIQKVA-RVKIDASTKTPGWKFNEYEMK 340 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+++ VG K + ++V + R T +E +S++++ Sbjct: 341 GIPIRLEVGPKDIEKNQVVLVRRDTKEKECISMDQL 376 >gi|58337807|ref|YP_194392.1| threonyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227904456|ref|ZP_04022261.1| theronyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] gi|73919799|sp|Q5FIW3|SYT_LACAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|58255124|gb|AAV43361.1| theronyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227867831|gb|EEJ75252.1| theronyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] Length = 644 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 89/405 (21%), Positives = 162/405 (40%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I + + G + P L + D + SG + Y +M Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVADGYKHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VELDQVQSEFAKILKLIMDVYRDFDITDYYFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M D + L+ + E A Y D+ + +L + Sbjct: 425 PKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFGL----TYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N +AH + EK+ L+K G V DD E++G + Sbjct: 534 KGAFPTW---LAPVQAEIIPVNNEAHGEY----AEKVRQELAKRGFRVEVDDRNEKMGYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G + + + V ++ T SL++ IN Sbjct: 587 IRESQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLDDFIN 631 >gi|15673893|ref|NP_268068.1| theronyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|281492524|ref|YP_003354504.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|22654138|sp|Q9CED2|SYT_LACLA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|12724948|gb|AAK06009.1|AE006421_2 theronyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|281376188|gb|ADA65679.1| Threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|326407464|gb|ADZ64535.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 646 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 88/412 (21%), Positives = 170/412 (41%), Gaps = 37/412 (8%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G WLP G + + +++ + G + P + + + + +SG + Y ++M Sbjct: 262 GTAYWLPAGATIRRIIERFVVDQEVKNGYQHVITPVMMNLNTYKQSGHWQHYHEDMYPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D + M P + I++ H+ SYR LP + + R E G+ R RE Sbjct: 322 DMGDGEEMELRPMNCPSHIAIYKHHVHSYRELPIRIAEFGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + E + ++K+ + ++ G+ R LS+ D Sbjct: 382 TLNDGHTF-VMLEQVQEEFSKILQLIMDMYRDFGINDYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T + D M + D ++L+ + E A Y D+ ++ +L Sbjct: 427 PKDTVKYFPDDEMWEKSQAMLKATMDDMNLDYVEAEGEAAFYGPKLDI---QVKTALGNE 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ + F Y GADG+ H M G+ + R +A +IE Sbjct: 484 ETLSTIQLDFLNPENFDISYI--------GADGEKHRPVMIHRGVISTLERFIAYLIEVY 535 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP + ++I + ++++ D KI L G V D+ E++G + Sbjct: 536 ---KG-AFPTWLAPTQATIIPV--NNEIHADYAWKIQRELQDKGFRVVVDEANEKMGWKI 589 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + P Q+++G + +D V I+ + + + LEE I S +N Sbjct: 590 RQSQTHKIPYQIVIGDQEQADGTVNIRRYGSKETKVIPLEEFIENISADVAN 641 >gi|15806285|ref|NP_294990.1| prolyl-tRNA synthetase [Deinococcus radiodurans R1] gi|81858880|sp|Q9RUW4|SYP_DEIRA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|6459012|gb|AAF10837.1|AE001974_2 prolyl-tRNA synthetase [Deinococcus radiodurans R1] Length = 499 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 76/408 (18%), Positives = 157/408 (38%), Gaps = 71/408 (17%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLRLADRNDK 102 P G +N+ + + +G + PTL + + E+ + + E+ + + Sbjct: 56 PYGSALWENIQRWLDDRFKASGHESLIFPTLIPMNFIMKEADHVEGFAPELFTVNKIGTE 115 Query: 103 AM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMK 158 + + PT E ++ ++ + SYR+LPF YQ FR ELR + +R+ EF Sbjct: 116 ELAEPYVMRPTSETIIGHMWSGWLNSYRDLPFLHYQWGSVFRAELRTK-AFLRTSEFFWH 174 Query: 159 DAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 + ++ ++ + DL HEF Sbjct: 175 EGHTAHADEAEARAEVRQQL--------------------------DLYHEFC------- 201 Query: 219 TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 +D + P+ + + E++ A S E Sbjct: 202 ------RDVLALPV---------VRGEKTASERFAGAVATYS-----------IEGMMRD 235 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G +S ++ + K+ + S+ I + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHYLGQNFSRAFDVKYQTREQKEEFAHTTSWAISS-RIIGAIIMTHGDDSGL 294 Query: 339 IWPDSVAPFKISLINIKAH---DQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ +I + DQ+ ++ EK+ A L G V D G G ++ Sbjct: 295 MMPPRIAPIQVVVIPVGRKDNFDQMVQEG-EKLAAELRAQGLRVKVDGRDGVTNGFKYND 353 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +L G P+++ +G + + + +K+R + +E + E ++ S R Sbjct: 354 WELKGVPVRIELGPRDLESGVLVVKNRHSEDKETLPRAEAVSGMSARL 401 >gi|291542076|emb|CBL15186.1| prolyl-tRNA synthetase [Ruminococcus bromii L2-63] Length = 479 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 81/160 (50%), Gaps = 2/160 (1%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G YFG ++ T+ G D K HY S+G+ + R++ A+I D G++ Sbjct: 227 ALQGGTSHYFGDGFAKSFGITYTGKDNKLHYPHQTSWGV-STRMIGALIMVHSDDDGLVL 285 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P ++P +++LI + H + + E++ L++ V D G +FA ++ G Sbjct: 286 PPKISPIQVALIPVAQHKEGVLEKAEELRKALAE-KFRVKLDSSDHAPGWKFAEYEMKGV 344 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 P++V +G K + ++ + R T + +S++E++ + + Sbjct: 345 PVRVEIGPKDIEKNQCVVVRRDTREKAFVSIDELVPFVEN 384 >gi|295111615|emb|CBL28365.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Synergistetes bacterium SGP1] Length = 633 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 92/423 (21%), Positives = 161/423 (38%), Gaps = 56/423 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H+ G + P G ++ + R E R G E+ P + +LW+ SG +D Y + Sbjct: 253 LHEEGPGFPFFHPKGMVVMNTLIDFWRREHVRRGYQEVRTPQILDRELWLRSGHWDHY-R 311 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + ++K P + I+++ + SYR LP ++ + R E G+M Sbjct: 312 ENMYFTEIDEKPFAIKPMNCPGGILIYKTQLHSYRELPMRIGELGVVHRHERSGVLHGLM 371 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ L E S+ M G+ + S G + E Sbjct: 372 RVRCFTQDDAH---LYCEPSQIQQEVM-----------GIMDLCRYVYSDVFGFKYAVEL 417 Query: 211 IVLADT--GETQVF-CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + G T+ + +++ + + NT + + E A Y D H E Sbjct: 418 STKPENAMGSTEQWEAAENGLRAALEQSNTPY-------RVNEGDGAFYGPKIDFHLEDC 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGA 321 +G + GT + +P + DGK+H V + +G+ Sbjct: 471 ----------------IGRTWQCGTIQLDFQMPERFDMHYIAEDGKEHRPVMLHRTILGS 514 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVF 380 + ++ + G W +AP + LI I +AH R E++ L G Sbjct: 515 LERFMGILIEHYAGAFPYW---IAPVQAELIPISEAH----RAYAEELRKELMSWGVRTE 567 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 D E++G + A L P +++G K + +V ++ R G MSLE S Sbjct: 568 TDSRDEKLGKRIRDAQLQKVPYMIVIGDKERDERQVAVRERTKGDLGSMSLEAFQKLLSA 627 Query: 441 RFS 443 F+ Sbjct: 628 EFN 630 >gi|167589762|ref|ZP_02382150.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ubonensis Bu] Length = 406 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 4/134 (2%) Query: 31 MIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDS 88 + HQ S G W P G V IRE + G E+ P + S LW +SG ++ Sbjct: 15 LFHQQDESPGAVFWHPRGMALYRVVEEYIRERMRQAGFAEVRTPQIASRALWEQSGHWEK 74 Query: 89 YGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 +G+ M L D + + P +F+ +SYR+LP + + R E Sbjct: 75 FGRNMFSL-DSDGQPFCLKPMSCPCHVQVFKRGSRSYRDLPVRYSEFGAVHRAEPSGSLH 133 Query: 148 GVMRSREFLMKDAY 161 G+MR+R F DA+ Sbjct: 134 GLMRARAFTQDDAH 147 >gi|317502695|ref|ZP_07960807.1| proline--tRNA ligase [Prevotella salivae DSM 15606] gi|315666181|gb|EFV05736.1| proline--tRNA ligase [Prevotella salivae DSM 15606] Length = 493 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVQFLNKENKPDYVWATSWGV-STRLMGALIMVHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQ---VCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I D+ D + + ++ ++G V +DD ++ G +FA Sbjct: 295 VLPPKLAPIQVVIVPIYKGDEQRKAISDKLQPVITKMQELGISVKFDDSDNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++++G + + ++ +EI R T +E++S + ++ Sbjct: 355 YELKGVPVRLVMGGRDLENNTIEIMRRDTLEKENVSFDGIV 395 Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + D+ +I PT E ++ + +R I S+R+LP Q R E+R R +R+ EFL Sbjct: 114 AAKLDEELIIRPTSETIIWNTYRGWIHSWRDLPIMCNQWCNVMRWEMRTR-PFLRTSEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSY 181 ++ ++ T E ++ M Y Sbjct: 173 WQEGHTAHATKEEAEQEAQTMLKVY 197 >gi|313891921|ref|ZP_07825522.1| threonine--tRNA ligase [Dialister microaerophilus UPII 345-E] gi|329121028|ref|ZP_08249659.1| threonine--tRNA ligase [Dialister micraerophilus DSM 19965] gi|313119564|gb|EFR42755.1| threonine--tRNA ligase [Dialister microaerophilus UPII 345-E] gi|327471190|gb|EGF16644.1| threonine--tRNA ligase [Dialister micraerophilus DSM 19965] Length = 634 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 89/375 (23%), Positives = 149/375 (39%), Gaps = 51/375 (13%) Query: 58 REEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTD 116 RE + G E+ P + S +LW++SG +D Y + M D D A+ P + Sbjct: 281 RELFRKYGYEEIVTPIILSKNLWLQSGHWDHYRENMYFTKIDNEDYAV--KPMNCPGGIL 338 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 F++ +SYR+LP + L R EL G+ R R F DA+ F +TP+ + Sbjct: 339 YFKTQQRSYRDLPKRVGEFGLVHRHELHGALHGLFRVRNFTQDDAHIF-MTPKDMESEVI 397 Query: 176 KMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + + ++ GLK + R E+ +G D E A + I Sbjct: 398 SVVNMFKELYDVFGLKYHIELSTRPENS-MGSDELWEIATNA-------------LRNAI 443 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 S N + I E A Y D H E DSL R + G I Sbjct: 444 ESTNVSY-------RINEGDGAFYGPKLDFHIE---DSL-------GRTWQCGTI---QM 483 Query: 293 KYSLP--MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 LP T+ G DG+ H V + G G++ ++ + G +P AP ++ Sbjct: 484 DMQLPERFDVTYVGEDGEKHRAVMIHRAGYGSLERFIGILIEHYAGA---FPTWCAPVQV 540 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 +I + + + +++Y ++ + G V D + +G + A + P V+VG K Sbjct: 541 KIIPVSEN---YHNYAQEVYKKMFEQGIRVEIDKGNDTLGYKIRKAQMEKIPYMVVVGEK 597 Query: 410 FVSDSKVEIKHRLTG 424 + + ++ R G Sbjct: 598 ESNSGNISVRSREKG 612 >gi|228956855|ref|ZP_04118640.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802896|gb|EEM49729.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 502 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 79/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ T + +P + + L E + + E+ Sbjct: 62 KGCMILRPYGYALWENMQKVMDEKLKETDHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 121 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 122 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 178 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 179 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 212 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 213 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 248 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 249 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 297 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ A + KV V D + Sbjct: 298 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQAHIQKVA-RVKIDASNKTP 356 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E + ++++ Sbjct: 357 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQL 402 >gi|156083641|ref|XP_001609304.1| prolyl-tRNA synthetase [Babesia bovis T2Bo] gi|154796555|gb|EDO05736.1| prolyl-tRNA synthetase, putative [Babesia bovis] Length = 705 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 5/159 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 S RGI+ GT ++ F+ +G S+G R + I D +G Sbjct: 432 SGRGIQAATSHLLGTNFAKMFDIVFEDENGVKQLAHQTSWGF-TTRSIGVSIMIHGDDQG 490 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRD---ACEKIYARLSKVGCDVFWDD-MGEQIGSQFA 393 ++ P V+ +I ++ I A ++ +D E +YARL K G DD +G G +F Sbjct: 491 LVIPPRVSKVQIVIVPIIAKKELQKDIMAVAEDMYARLKKAGFRTHLDDRVGYTPGFKFN 550 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +L G PL++ +G++ + + +R G + D+ LE Sbjct: 551 HWELRGVPLRIEIGARDIQTQSCRVCYRYNGHKTDVKLE 589 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 7/176 (3%) Query: 26 MLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-LWVES 83 ++R GM+ + G Y +LP + E + G P S L E Sbjct: 232 IIRGGMVEYYDISGCYIYLPSSYFIWEVFQQWFNENIKKEGVENCYFPMFVSKQKLETEK 291 Query: 84 GRYDSYGKEMLRLADRNDKAMI----YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 + + E+ + D + PT E +M F I+S+R+LP Q Sbjct: 292 NHIEGFSPEVAWVTKYGDSDFVEPIAIRPTSETIMYPEFSKWIRSHRDLPLKLNQWCSVV 351 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR-LGLKSIP 194 R E + +RSREFL ++ ++ + E + ++ M Y R + L + IP Sbjct: 352 RWEFKQPTPFLRSREFLWQEGHTAHKSEEDAMNTVMTMLRLYQRFYEEFLAVPVIP 407 >gi|328951623|ref|YP_004368958.1| Prolyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] gi|328451947|gb|AEB12848.1| Prolyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] Length = 477 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 5/168 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GT ++ F+ D + YV S+G+ + R + A+I + D KG+ Sbjct: 221 GKALQAGTSHYLGTNFAKAFDIKFQDRDLETKYVHTTSWGL-SWRFIGAIIMTHGDDKGL 279 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVA 395 I P +AP ++ ++ I R +A + + RL G V DD + G +F Sbjct: 280 ILPPKLAPIQVVIVPIYKEATRARVLEAAQALEQRLKAQGVRVHLDDRDQYTPGYKFNDW 339 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +L G P +V +G + V + RL G +E + LE + R + Sbjct: 340 ELRGVPYRVELGPRDVESGTAVLASRLGG-KETLPLEGLAEAVPQRLA 386 Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 7/112 (6%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 D ++ + PT E ++ ++ I+SYR+LP Q R E+R R +R+ EFL Sbjct: 99 GDALEEPLAVRPTSETIIGHMWAKWIRSYRDLPQLLNQWGNVVRWEMRTR-PFLRTSEFL 157 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP----MRAESGPIGG 204 ++ ++ T E ++ +M Y + +IP M+ ES G Sbjct: 158 WQEGHTAHATQEEAEAETRRMLGVYATLAREYA--AIPVWEGMKTESEKFAG 207 >gi|255008477|ref|ZP_05280603.1| putative threonyl-tRNA synthetase [Bacteroides fragilis 3_1_12] gi|313146205|ref|ZP_07808398.1| threonine-tRNA ligase [Bacteroides fragilis 3_1_12] gi|313134972|gb|EFR52332.1| threonine-tRNA ligase [Bacteroides fragilis 3_1_12] Length = 646 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 100/433 (23%), Positives = 161/433 (37%), Gaps = 88/433 (20%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRLRLQDFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + +I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K +LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPDQVKG-------EFLRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---------EQWTAPYAATSDVH 263 VF S DF T+F+ ISL V E W A + Sbjct: 410 --------VFRSMDF---------TNFEAQISLRDKVNREKYIGSDENWEKAEQAIIEAC 452 Query: 264 NEKLFDSLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDH 310 EK + E + G + +G + GT Y+LP + G+D + H Sbjct: 453 EEKGLKAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKH 512 Query: 311 Y-VQMGSYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACE 366 V + G+M R VA +IE + GK +W P+ V IS + + E Sbjct: 513 RPVMIHRAPFGSMERFVAVLIEHTA-GKFPLWLTPEQVVILPIS--------EKFNEYAE 563 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L DD E+IG + ++ P +IVG K + +V ++ + G + Sbjct: 564 KVKTYLKTKEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDK 623 Query: 427 EDMSLE---EVIN 436 M E E++N Sbjct: 624 GTMKFEDFGEILN 636 >gi|327252835|gb|EGE64489.1| threonyl-tRNA synthetase [Escherichia coli STEC_7v] Length = 622 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 412 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G IW +AP ++ ++NI + ++ +LS G V D Sbjct: 501 FIGILTEEFAGFFPIW---LAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 605 >gi|15895629|ref|NP_348978.1| threonyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|22654130|sp|Q97GK4|SYT_CLOAB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|15025373|gb|AAK80318.1|AE007736_8 Threonyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|325509777|gb|ADZ21413.1| threonyl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 637 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 102/438 (23%), Positives = 174/438 (39%), Gaps = 54/438 (12%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 ++ +L+E RD +L L T +H+ G + P G + + RE ++ G Sbjct: 231 YINMLEEAKKRDHRKIGKELDLFT--MHEEGPGFPFFHPKGMVLKNLLLNYWREVHDKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+S P + + LW +SG +D Y + M D D A+ P + +++ +I S Sbjct: 289 YDEISTPIILNEALWHQSGHWDHYKENMYFTKIDEADYAI--KPMNCPGSILVYKDNIHS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN--KMFVSY 181 YR LP +I L R E G+MR R F DA+ F + ++ K+ S+ Sbjct: 347 YRELPIKLAEIGLVHRHEKSGALHGLMRVRCFNQDDAHIFMTKEQITEEILGVIKLIDSF 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++F + R E +G D E A G + + Sbjct: 407 YKVFGFEYYVELSTRPEDS-MGSDEDWE---AATNGLINALNAAN--------------- 447 Query: 242 IISLNSIVEQWT-APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--M 298 L IV + A Y D H L D + R + G I + +P Sbjct: 448 ---LEYIVNEGDGAFYGPKIDFH---LKDCI-------GRTWQCGTI---QLDFQMPERF 491 Query: 299 SATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + GADG+ H V + G++ ++ + G +P +AP ++ ++NI Sbjct: 492 DINYIGADGEKHRPVMVHRVVFGSIERFIGILIEHYAGA---FPTWLAPVQVKVMNITDS 548 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 DA I +L + G V D E+IG + A L P +++G K + + + Sbjct: 549 QVEYVDA---ISEKLKEAGIRVEKDVRNEKIGYKIREAQLKKVPYMIVIGDKEIKEGIIS 605 Query: 418 IKHRLTGIREDMSLEEVI 435 ++ R G M++E+ I Sbjct: 606 VRSRKEGDLGSMNIEDFI 623 >gi|9955215|pdb|1EVK|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With The Ligand Threonine gi|9955216|pdb|1EVK|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With The Ligand Threonine gi|9955217|pdb|1EVL|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With A Threonyl Adenylate Analog gi|9955218|pdb|1EVL|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With A Threonyl Adenylate Analog gi|9955219|pdb|1EVL|C Chain C, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With A Threonyl Adenylate Analog gi|9955220|pdb|1EVL|D Chain D, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With A Threonyl Adenylate Analog gi|12084202|pdb|1FYF|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase Complexed With A Seryl Adenylate Analog gi|12084203|pdb|1FYF|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase Complexed With A Seryl Adenylate Analog gi|20664135|pdb|1KOG|A Chain A, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664136|pdb|1KOG|B Chain B, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664137|pdb|1KOG|C Chain C, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664138|pdb|1KOG|D Chain D, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664139|pdb|1KOG|E Chain E, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664140|pdb|1KOG|F Chain F, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664141|pdb|1KOG|G Chain G, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664142|pdb|1KOG|H Chain H, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator Length = 401 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 15 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 74 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 75 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 133 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 134 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 190 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 191 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 229 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 230 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 279 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 280 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 333 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 334 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 384 >gi|294631964|ref|ZP_06710524.1| prolyl-tRNA synthetase [Streptomyces sp. e14] gi|292835297|gb|EFF93646.1| prolyl-tRNA synthetase [Streptomyces sp. e14] Length = 470 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 67/335 (20%), Positives = 134/335 (40%), Gaps = 62/335 (18%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ + F ++SYR+LP Q R E+RPR +R+ EFL ++ Sbjct: 103 EEPIVVRPTSETIVNEYFSKWVQSYRDLPLLINQWANVVRWEMRPRV-FLRTTEFLWQEG 161 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E ++ +Y HR D+ H+F+V Sbjct: 162 HTAHATYEDAR--------AYAARIHR-----------------DVYHDFMV-------- 188 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 +++++ ++ + T ++ L + + K Sbjct: 189 --------------------GVLAIDVVLGRKTVRERFAGAINTLTLEGMMGDGK----- 223 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 +++G G ++ + DG+ V S+G + R+V +I S D G+ Sbjct: 224 ALQMGTSHELGQNFAKAFHTQYLSKDGRQELVWQTSWGT-STRMVGGLIMSHGDDSGLRV 282 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLG 399 P +AP + ++ +K D V E I RL G V DD + G + +L G Sbjct: 283 PPRLAPVQAVVLAVKDDDAVIAKVRE-IGDRLKAAGVRVQVDDRTDVPFGRRAVDWELKG 341 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 P+++ VG + + + + R+ G + + + E+ Sbjct: 342 VPVRIEVGPRDLENGTAMLARRIPGGKAPVRIGEI 376 >gi|188994826|ref|YP_001929078.1| threonyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] gi|238691475|sp|B2RJD6|SYT_PORG3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|188594506|dbj|BAG33481.1| threonyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] Length = 653 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 93/423 (21%), Positives = 161/423 (38%), Gaps = 72/423 (17%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + +++ Q G ++ P + + +L++ SG Y YG++ R Sbjct: 263 GLPLWLPRGTQLRLRLEDFLKQIQKHFGYQQVITPHIGNKNLYITSGHYAKYGQDSFRPI 322 Query: 98 D--RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + + + P + +IF+ SYR+LP + +R E G+ R R Sbjct: 323 NTPQEGEEFMLKPMNCPHHCEIFKITPHSYRDLPIRLAEFGTVYRYEQSGELHGLTRVRG 382 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F P+ K + K+ IF L K+ + I L Sbjct: 383 FTQDDAHLF-CRPDQLKEEFCKVMDIIFIIFKALDFKNFEAQ--------------ISLR 427 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D + + + E W A + EK ++ E Sbjct: 428 DKVNREKYIGSE-----------------------ENWERAERAIIEACEEKGLPAVIEY 464 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 + G + +G + GT Y+LP + G D K H V + G Sbjct: 465 GEAAFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFDLEYTGEDNKKHRPVMIHRAPFG 524 Query: 321 AM-RVVAAVIESSHDGKGIIW--PDSVAPFKIS-LINIKAHDQVCRDACEKIYARLSKVG 376 +M R VA +IE + GK +W PD V +S N AH ++ L++ Sbjct: 525 SMERFVAVLIEHTA-GKFPLWLTPDQVVVLPVSERFNEYAH---------RVAKELNQRD 574 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 V DD E++G + +L P +IVG + +V ++ + G DM + ++ Sbjct: 575 IRVQVDDRNEKVGRKIRDNELKRIPYMLIVGENESREEEVSVRKQGEG---DMGIMKITT 631 Query: 437 YAS 439 +A Sbjct: 632 FAE 634 >gi|323968488|gb|EGB63894.1| threonyl-tRNA synthetase [Escherichia coli M863] Length = 642 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G IW +AP ++ ++NI + ++ +LS G V D Sbjct: 521 FIGILTEEFAGFFPIW---LAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 625 >gi|294673346|ref|YP_003573962.1| threonine--tRNA ligase [Prevotella ruminicola 23] gi|294474289|gb|ADE83678.1| threonine--tRNA ligase [Prevotella ruminicola 23] Length = 648 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 95/430 (22%), Positives = 158/430 (36%), Gaps = 72/430 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + +R+ Q R G E+ P + S +L+V SG Y YGK+ + Sbjct: 263 GKGLPIWLPKGTELRLRLQDHLRKVQKRFGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQ 322 Query: 96 L--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 D+ + P + +IF +SYR+LP + +R E G+ R Sbjct: 323 PIHTPEEDEEYMLKPMNCPHHCEIFAWKPRSYRDLPLRIAEFGTVYRYEQSGELHGLTRV 382 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K +L + +G IV Sbjct: 383 RSFTQDDAHLF-CRPDQVKQ-------EFLNVMDIIG---------------------IV 413 Query: 213 LADTG---ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 L G E Q+ + D D + + E W A + EK Sbjct: 414 LTAFGFNFEAQISL----------RDPNDHDKYVGTD---EDWALAEKAIVEACQEKGLP 460 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLPMSATFKGAD---GKDHYVQMG 315 + E + G + +G + GT Y+LP + D K V + Sbjct: 461 AKVEYGEAAFYGPKLDFMIKDAIGRRWQLGTIQVDYNLPKRFNLEYTDEDNQKKTPVMIH 520 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 G+M AV+ G +W PD VA +S + D +++ + Sbjct: 521 RAPFGSMERFCAVLIEHTSGHFPLWLTPDQVAILPLS--------EKYNDYAQEVAKKFD 572 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G D E++G + +L P VIVG K ++ V ++ + G + +++E Sbjct: 573 MGGVRATVDMRNEKLGRKIRDNELKRIPYMVIVGEKEAAEGTVAVRPQGGGEQSVKTIQE 632 Query: 434 VINYASHRFS 443 I+ + R + Sbjct: 633 FIDEVNARVA 642 >gi|57239615|ref|YP_180751.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58579605|ref|YP_197817.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|73919788|sp|Q5H9Z4|SYT_EHRRW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|57161694|emb|CAH58624.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58418231|emb|CAI27435.1| Threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 633 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 94/401 (23%), Positives = 159/401 (39%), Gaps = 62/401 (15%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 G I H KG+ + + ++N IR++ G IE+ P L S LW +SG +D + Sbjct: 261 GQIFWHEKGLIIY-----RIIENY---IRKKLENNGYIEVKTPYLLSKTLWEQSGHWDKF 312 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M L++ ++K + P + IF S I+SY++LP + R E G Sbjct: 313 REHMF-LSEIDNKVVAIKPMNCPCHVQIFNSKIRSYKDLPLRMAEFGTCHRYESSGALHG 371 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 +MR R F DA+ F T + K + ++ G K I ++ P G D Sbjct: 372 LMRVRSFTQDDAHIF-CTEDQIIEEALKFCNLLMEVYEVFGFKDILVKFSDRPEKRAGSD 430 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + D E + S + + N LN ++ + + Sbjct: 431 ------KIWDKAEEALKAS-------VKAAN--------LNYVLNPGDGAF------YGP 463 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI- 319 KL +L + +G + GT + LP + A + G+DGK H+ M I Sbjct: 464 KLEFTLKD---------AIGREWQCGTLQMDFVLPERLGAYYTGSDGKKHHPIMLHRAIL 514 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G + ++ H GK IW +AP ++S++ I D + K A + +V Sbjct: 515 GTIERFIGILIEHHSGKLPIW---LAPVQLSILTI-TEDAIDYAISLKHKAMKQNIRAEV 570 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D E+I + P+ I+G K + V I++ Sbjct: 571 --DITNEKINYKIRSHISKKIPVLWIIGKKEIETESVSIRY 609 >gi|34540737|ref|NP_905216.1| threonyl-tRNA synthetase [Porphyromonas gingivalis W83] gi|73919814|sp|Q7MVQ5|SYT_PORGI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|34397051|gb|AAQ66115.1| threonyl-tRNA synthetase [Porphyromonas gingivalis W83] Length = 653 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 93/423 (21%), Positives = 161/423 (38%), Gaps = 72/423 (17%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + +++ Q G ++ P + + +L++ SG Y YG++ R Sbjct: 263 GLPLWLPRGTQLRLRLEDFLKQIQKHFGYQQVITPHIGNKNLYITSGHYAKYGQDSFRPI 322 Query: 98 D--RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + + + P + +IF+ SYR+LP + +R E G+ R R Sbjct: 323 NTPQEGEEFMLKPMNCPHHCEIFKITPHSYRDLPIRLAEFGTVYRYEQSGELHGLTRVRG 382 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F P+ K + K+ IF L K+ + I L Sbjct: 383 FTQDDAHLF-CRPDQLKEEFCKVMDIIFIIFKALDFKNFEAQ--------------ISLR 427 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D + + + E W A + EK ++ E Sbjct: 428 DKVNREKYIGSE-----------------------ENWERAERAIIEACEEKGLPAVIEY 464 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 + G + +G + GT Y+LP + G D K H V + G Sbjct: 465 GEAAFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFDLEYTGEDNKKHRPVMIHRAPFG 524 Query: 321 AM-RVVAAVIESSHDGKGIIW--PDSVAPFKIS-LINIKAHDQVCRDACEKIYARLSKVG 376 +M R VA +IE + GK +W PD V +S N AH ++ L++ Sbjct: 525 SMERFVAVLIEHTA-GKFPLWLTPDQVVVLPVSERFNEYAH---------RVAKELNQRD 574 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 V DD E++G + +L P +IVG + +V ++ + G DM + ++ Sbjct: 575 IRVQVDDRNEKVGRKIRDNELKRIPYMLIVGENESREEEVSVRKQGEG---DMGIMKITT 631 Query: 437 YAS 439 +A Sbjct: 632 FAE 634 >gi|121605747|ref|YP_983076.1| threonyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] gi|166225475|sp|A1VR77|SYT_POLNA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120594716|gb|ABM38155.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Polaromonas naphthalenivorans CJ2] Length = 635 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 97/414 (23%), Positives = 155/414 (37%), Gaps = 60/414 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I HS G+ W P G V +R+ G E+ P L LW ++G +D Y Sbjct: 255 IDDHSPGLVFWHPKGWTVWQGVEQYMRKVYQNNGYQEVKGPQLLDKTLWEKTGHWDKYRD 314 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M +++ D A+ P + IF+ IKSYR+LP + + R+E G+ Sbjct: 315 NMFTTESEKRDFAL--KPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHGI 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGD 205 MR R F D + F + K + + + L +++ G K+I + + P IG D Sbjct: 373 MRVRGFTQDDGHIFCTEEQILKECVD--YTTLLQKVYTDFGFKNIIYKVATRPEARIGSD 430 Query: 206 LSHEFIVLADTGETQVFCS--KDFMDFPI-PSENTDFDDIISL---NSIVEQWTAPYAAT 259 S D E + S +F I P E + I ++I QW T Sbjct: 431 ESW------DKAEHALIESLRASGCEFEISPGEGAFYGPKIEYTLKDAIGRQWQ---CGT 481 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYG 318 V S+PE + A + G DG H V + Sbjct: 482 IQVDF-----SMPER-----------------------LDAEYVGEDGARHRPVMLHRAI 513 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G++ ++ H G W +AP ++S++ I + + L G Sbjct: 514 VGSLERFIGILIEEHAGALPTW---LAPEQVSVLTITDSQA---EYARGVAKTLQNQGLR 567 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 V D E+I + L P ++VG K ++ V ++ R MSLE Sbjct: 568 VNLDLRNEKITYKIREHSLQKLPFILVVGDKEMAAGAVSVRARGNKDLGVMSLE 621 >gi|255526047|ref|ZP_05392970.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|255510233|gb|EET86550.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 638 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 100/440 (22%), Positives = 173/440 (39%), Gaps = 58/440 (13%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +H+ G + P G + + RE + Sbjct: 231 YLNMLEEAKKRDHRKLGKELDLFS--MHEEGPGFPFFHPKGMIIRNTLQNFWREMHSAAD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y KE + +++ P + ++++ I SY Sbjct: 289 YDEIMTPVILNEKLWRQSGHWDHY-KENMYFTKIDNEDYAIKPMNCPGSILVYKNTIHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN--KMFVSYL 182 R LP + ++ L R E G+MR R F DA+ F + N K+ + Sbjct: 348 RELPLRYAEMGLAHRHEKSGALHGLMRVRCFTQDDAHMFLAKDNITDEIVNVIKLIDDFY 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++F + R E +G D E A G + D Sbjct: 408 KVFGFEYFVELSTRPEDS-MGSDEDWE---AATNGLRKAL------------------DT 445 Query: 243 ISLNSIVEQWT-APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP- 297 I L V + A Y D H L D +G + GT + +P Sbjct: 446 IGLKYKVNEGDGAFYGPKIDFH---LRDC-------------IGRTWQCGTVQLDFQMPE 489 Query: 298 -MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ GADG+ H V + G++ ++ + G +P +AP ++ ++NI Sbjct: 490 RFDLTYIGADGEKHRPVMVHRVVFGSVERFIGILIEHYAGA---FPAWLAPVQVKIMNI- 545 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 DQ+ D K+ L K V D E+IG + A L P +++G K + ++ Sbjct: 546 TDDQI--DYANKVAKELKKNKIRVEVDLRNEKIGYKIREAQLQKVPYMLVLGDKEMKENT 603 Query: 416 VEIKHRLTGIREDMSLEEVI 435 V ++ R G M+L++ + Sbjct: 604 VAVRSRKLGDLGAMALDQFV 623 >gi|187776737|ref|ZP_02993210.1| hypothetical protein CLOSPO_00252 [Clostridium sporogenes ATCC 15579] gi|187775396|gb|EDU39198.1| hypothetical protein CLOSPO_00252 [Clostridium sporogenes ATCC 15579] Length = 478 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 63/329 (19%), Positives = 131/329 (39%), Gaps = 66/329 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + + + ++SY++LP + Q +++ RP +R+ EFL ++ ++ Sbjct: 114 PTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKTTRP---FLRTAEFLWQEGHTIHA 170 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 T E ++ +M Y + H + +IP ++ E + F Sbjct: 171 TAEEARKETEQMLNVYAK--HVEDVLAIP----------------VIKGQKTEQEKFAGA 212 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 A Y S +H+ + ++ G Sbjct: 213 ---------------------------VATYTIESLMHD--------------GKALQTG 231 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 Y G ++ + +GK V S+G+ R++ A+I D G++ P +A Sbjct: 232 TSHYLGDHFASAFGIQYSDKEGKLQNVHQTSWGV-TTRMLGAIIMVHGDNSGLVVPPRIA 290 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P ++ ++ + H + D ++ R+ KV V DD + G +F ++ G P+++ Sbjct: 291 PIQVVIVPVAQHKEGVLDKAYELKERVGKVA-RVKLDDTDKMPGWKFNEYEMKGVPIRLE 349 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 VG K + ++V + R T + +S++E+ Sbjct: 350 VGPKDIEKNQVVLVRRDTREKITVSMDEL 378 >gi|255009422|ref|ZP_05281548.1| prolyl-tRNA synthetase [Bacteroides fragilis 3_1_12] gi|313147182|ref|ZP_07809375.1| prolyl-tRNA synthetase [Bacteroides fragilis 3_1_12] gi|313135949|gb|EFR53309.1| prolyl-tRNA synthetase [Bacteroides fragilis 3_1_12] Length = 497 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 88/166 (53%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I A+L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +E+ R T +E ++ + + Y + Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCDGIETYVQN 400 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|295425303|ref|ZP_06818006.1| threonine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] gi|295065079|gb|EFG55984.1| threonine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] Length = 659 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 89/405 (21%), Positives = 161/405 (39%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I + + G + P L + D + SG + Y +M Sbjct: 275 GLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 334 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + IF+ HI+SYR+LP ++ + R E G+ R RE Sbjct: 335 DMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREM 394 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 395 TLNDGHTF-VALDQVQDEFAKILKLIMDVYKDFDITDYYFR---------LSYR-----D 439 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 TQ + + D M D + L+ + E A Y D+ + +L + Sbjct: 440 PKNTQKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 496 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 497 ETMSTIQLD----FMLPDRFGL----TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIY 548 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N AH + EK+ L+K G D+ E++G + Sbjct: 549 KGAFPTW---LAPIQAEIIPVNNDAHGEY----AEKVRQELAKRGFRAEVDNRNEKLGYK 601 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G + + + V ++ T SL++ IN Sbjct: 602 IRESQTQKVPYTLVLGDEEMKSNSVNVRRYGTDEEISKSLDDFIN 646 >gi|228906179|ref|ZP_04070068.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200] gi|228853588|gb|EEM98356.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200] Length = 502 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 77/393 (19%), Positives = 149/393 (37%), Gaps = 73/393 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 62 KGCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 121 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 122 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 178 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 179 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 212 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 213 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 248 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 249 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 297 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 298 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTP 356 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +F ++ G P+++ VG K + ++V + R Sbjct: 357 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRR 389 >gi|156103089|ref|XP_001617237.1| bifunctional aminoacyl-tRNA synthetase [Plasmodium vivax SaI-1] gi|148806111|gb|EDL47510.1| bifunctional aminoacyl-tRNA synthetase, putative [Plasmodium vivax] Length = 765 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 71/332 (21%), Positives = 125/332 (37%), Gaps = 63/332 (18%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E +M +F I+S+R+LP Q R E + +R+REFL ++ + T Sbjct: 377 PTSETIMYSVFSKWIRSHRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGH----TA 432 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++ KM L ++ R + + + G Sbjct: 433 HKNEEEAVKMVFDILDLYRRWYEECLAVPIIKG--------------------------- 465 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 I SE F A + +T++ + EN R I+ Sbjct: 466 ----IKSEGEKFGG------------ANFTSTAEAF-------ISENGR----AIQAATS 498 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 Y GT ++ F+ + YV S+G R + +I + D KG++ P VA F Sbjct: 499 HYLGTNFAKMFKIEFEDENETKQYVHQTSWGC-TTRSIGIMIMTHGDDKGLVLPPKVAKF 557 Query: 348 KISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMG-EQIGSQFAVADLLGFPLQ 403 K+ ++ I + V + C+ I L + +DD G +F +L G P++ Sbjct: 558 KVVIVPILYKNTDENVIFNYCKDIEKVLKSAQINCIFDDRDLYSPGYKFNHWELRGVPIR 617 Query: 404 VIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + VG K + ++ R T + ++ E V+ Sbjct: 618 IEVGPKDIQNNSCLCVRRDTNEKFNVKKESVL 649 >gi|317471035|ref|ZP_07930410.1| prolyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] gi|316901476|gb|EFV23415.1| prolyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] Length = 478 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 81/406 (19%), Positives = 160/406 (39%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ + TG +++P + + L E + + E+ Sbjct: 38 KGCMILRPNGYAIWENIQKVMDAKFKETGVENVAMPMFIPESLLEREKDHVEGFAPEVAW 97 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + +K + PT E + D + + I+SYR+LP + Q +++ RP Sbjct: 98 VTHGGNKKLEERLCVRPTSETLFCDFYSNIIQSYRDLPKLYNQWVSVVRWEKSTRP---F 154 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EF ++ ++ T + ++ +M Y Sbjct: 155 LRTSEFYWQEGHTAHATADEAEERTVQMLNMY---------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 AD FC + ++ P+ + T+ + N A Y + +H+ K Sbjct: 187 ----AD------FCEQ-YLAIPVVKGQKTEKEKFAGAN-------ATYTIEALMHDGKAL 228 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 S G FG ++ + + K YV S+G+ + R++ A+ Sbjct: 229 QS--------------GTSHNFGDGFAKAFDIQYTDKNNKLQYVHQTSWGM-STRIIGAI 273 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P +AP + ++ I + + E+I RLSK V DD + Sbjct: 274 IMVHGDDSGLVLPPKIAPVQTMIVPIMQKKEGVLEKAEEIRERLSK-NYKVKVDDSDKSP 332 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F+ ++ G P ++ +G K + ++ I R T + +SL+E+ Sbjct: 333 GWKFSEQEVQGIPTRIEIGPKDIEKNQAVIVRRDTREKIFVSLDEI 378 >gi|270293969|ref|ZP_06200171.1| threonyl-tRNA synthetase [Bacteroides sp. D20] gi|270275436|gb|EFA21296.1| threonyl-tRNA synthetase [Bacteroides sp. D20] Length = 646 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 95/432 (21%), Positives = 158/432 (36%), Gaps = 73/432 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L++ SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K +LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPDQVKD-------EFLRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S DF +F D ++ + E W A + EK Sbjct: 410 --------VFESMDFENF---EAQISLRDKVNREKYIGSDENWEKAERAIIEACEEKGLK 458 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + GAD + H V + Sbjct: 459 AKIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMVH 518 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W PD VA IS + D ++ L Sbjct: 519 RAPFGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNDYAHEVKQYL 569 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + D+ E+IG + ++ P ++VG K + +V ++ + G + M E Sbjct: 570 KRYDIRAIVDERNEKIGRKIRDNEMKRIPYMLVVGEKEAENKEVAVRKQGEGDKGTMKFE 629 Query: 433 EVINYASHRFSN 444 E + N Sbjct: 630 EFAKKMNEEVQN 641 >gi|284929344|ref|YP_003421866.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [cyanobacterium UCYN-A] gi|284809788|gb|ADB95485.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [cyanobacterium UCYN-A] Length = 608 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 83/402 (20%), Positives = 160/402 (39%), Gaps = 54/402 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +REEQ + G + + P + DL+ SG + +Y ++M L Sbjct: 222 GLPLWTPKGTIIRSVLENFLREEQLKRGYLPVVTPHIGKVDLFKTSGHWQNYKEDMFPLM 281 Query: 98 DRNDKA------MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 N+ A + P + I++S +KSYR+LP + +R E G+ Sbjct: 282 SDNEVARGEEIGFVLKPMNCPFHIQIYKSDLKSYRDLPVRLAEFGTVYRYEKSGELGGLT 341 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F + D++ F +TP+ + + L +F L LK+ R Sbjct: 342 RVRGFTVDDSHLF-VTPDQLDDEFLNVVNLILSVFENLQLKNFKAR-------------- 386 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS---IVEQWTAPYAATSDVHNEKL 267 + D + S + + S+N + + LN E A Y D + Sbjct: 387 LSFRDPSSNKYIGSDEVWE---KSQNAIYRAVKMLNIDYFEAEGEAAFYGPKLDFIFQDA 443 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRV 324 D R ++G + Y+LP + + G G H + + G++ Sbjct: 444 LD----------REWQLGTV---QVDYNLPERFNLEYIGEKGDKHRPIMIHRAPFGSLER 490 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR--LSKVGCDVFWD 382 + ++ + G +W ++P ++ ++ + + D + + +SK+ +V D Sbjct: 491 LIGILIEEYVGDFPLW---LSPVQVRILPV---SDLYLDYAKGVMQTMLMSKIRAEV--D 542 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 GE++G + P+ I+GSK + + + I+ R +G Sbjct: 543 TSGERLGKMIRKGEKEKIPVMAIIGSKEMETNSLNIRTRKSG 584 >gi|313678253|ref|YP_004055993.1| proline--tRNA ligase [Mycoplasma bovis PG45] gi|312950316|gb|ADR24911.1| proline--tRNA ligase [Mycoplasma bovis PG45] Length = 478 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 3/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y +S +FK +D +V S+G+ + R++ A+I + D +GI Sbjct: 221 GKALQAGTSHYLAQNFSKKFEISFKNDKNEDEFVYQTSWGV-STRLLGAIIMTHGDNRGI 279 Query: 339 IWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I P VAP ++ ++ + A+ Q D C+++ +L + V D + G + + +++ Sbjct: 280 IIPPKVAPVQVDILELFANKQPRVHDFCQELVKQLER-KFRVRLDSTDKSPGYKASNSEI 338 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ VG K + + V I R T + + + EV Sbjct: 339 QGVPLRIEVGPKDLENKTVTIVRRDTLEKTIVDISEV 375 >gi|288801328|ref|ZP_06406782.1| threonine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] gi|288331711|gb|EFC70195.1| threonine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] Length = 654 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 91/419 (21%), Positives = 150/419 (35%), Gaps = 65/419 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R+ Q R G E+ P L +L+V SG Y Y K+ R Sbjct: 263 KGMPIWLPKGTELRLRLQDMLRKIQKRFGYQEVMCPVLGGKNLYVTSGHYAHYSKDAFRP 322 Query: 97 ADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ Y P + ++F +SY++LP + +R E G+ R R Sbjct: 323 ITTPEEGEEYMLKPMNCPHHCEVFAWKPRSYKDLPLRISEFGNVYRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F PE K+ + ++ + K+ + I L Sbjct: 383 AFTQDDAHIF-CRPEQVKNEFLRVMDIIQAVLKIFDFKNFEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A D EK + E Sbjct: 428 RDPNNKEKYIGSD-----------------------EAWHEAEQAIIDACKEKGLTAKSE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLPMSATFKGAD---GKDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 LGEAAFYGPKLDFMIKDAIGRRWQLGTIQVDYNLPQRFKLEYTDEDNQKKTPVMIHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ AV+ G +W PD VA IS + D ++ G Sbjct: 525 GSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYAREVARFFDNNGV 576 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DD E+IG + +L P VIVG K ++ V ++ + G + M+ +E ++ Sbjct: 577 RATIDDRNEKIGRKIRDNELKRVPYMVIVGEKESAEGLVSMRKQGGGEQATMTQQEFVD 635 >gi|160889627|ref|ZP_02070630.1| hypothetical protein BACUNI_02053 [Bacteroides uniformis ATCC 8492] gi|317479178|ref|ZP_07938315.1| threonyl-tRNA synthetase [Bacteroides sp. 4_1_36] gi|156860619|gb|EDO54050.1| hypothetical protein BACUNI_02053 [Bacteroides uniformis ATCC 8492] gi|316904666|gb|EFV26483.1| threonyl-tRNA synthetase [Bacteroides sp. 4_1_36] Length = 646 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 95/432 (21%), Positives = 158/432 (36%), Gaps = 73/432 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L++ SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K +LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPDQVKD-------EFLRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S DF +F D ++ + E W A + EK Sbjct: 410 --------VFESMDFENF---EAQISLRDKVNREKYIGSDENWEKAERAIIEACEEKGLK 458 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + GAD + H V + Sbjct: 459 AKIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMVH 518 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W PD VA IS + D ++ L Sbjct: 519 RAPFGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNDYAHEVKQYL 569 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + D+ E+IG + ++ P ++VG K + +V ++ + G + M E Sbjct: 570 KRYDIRAIVDERNEKIGRKIRDNEMKRIPYMLVVGEKEAENKEVAVRKQGEGDKGTMKFE 629 Query: 433 EVINYASHRFSN 444 E + N Sbjct: 630 EFAKKMNEEVQN 641 >gi|218134037|ref|ZP_03462841.1| hypothetical protein BACPEC_01927 [Bacteroides pectinophilus ATCC 43243] gi|217991412|gb|EEC57418.1| hypothetical protein BACPEC_01927 [Bacteroides pectinophilus ATCC 43243] Length = 585 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 85/405 (20%), Positives = 162/405 (40%), Gaps = 60/405 (14%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ +LP G + I++++ + G + + P + + +L+ SG +D Y + M Sbjct: 200 GRGLPMFLPKGYVIWQELENYIKDKERKLGYLHVMTPCIGTVNLYKTSGHWDHYKENMFP 259 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D + ++ + P + I+ + + SY++LP +I FR E G+ R R Sbjct: 260 AMDVDGESFVLRPMNCPHHMMIYANRMHSYKDLPIRIGEIAHDFRYESSGTLKGIERGRH 319 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F +TPE + + ++ DL F Sbjct: 320 FCQNDAHIF-VTPEQIEDEFKRVV--------------------------DLI--FSTYK 350 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D G T C D P++ + D E W A V N+ + E Sbjct: 351 DFGITDYRCVLSLRD---PADKVKYHD------DDEMWNKAEDALRTVLNDLGIEYTEEI 401 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + G + VG+ + T + LP + T+ DG K V + +G Sbjct: 402 GEAAFYGPKLDVNVKPAVGNEYTLSTCQLDFCLPAKFNLTYIDKDGEKKTPVVLHRAILG 461 Query: 321 AM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 ++ R +A ++E + KG + P +AP ++ ++ +K ++ + +I + L + V Sbjct: 462 SLDRFMAYILEET---KGNL-PTWLAPVQVRVMPVKTDNEELMEYAHEICSALEEKNVRV 517 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 DD GE++G + + P +++G F + +RL G Sbjct: 518 ELDDRGEKLGYRMREGQIQKVPYLLVIG--FNEKEDRTVSYRLHG 560 >gi|189461379|ref|ZP_03010164.1| hypothetical protein BACCOP_02034 [Bacteroides coprocola DSM 17136] gi|189431908|gb|EDV00893.1| hypothetical protein BACCOP_02034 [Bacteroides coprocola DSM 17136] Length = 496 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 88/166 (53%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ + F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I +L ++G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVTKLREMGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +EI R T +E S + + Y + Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEIMRRDTLEKETRSCDGIEEYVKN 400 Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ +++ I SYR+LP Q R E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWSTYKNWINSYRDLPILCNQWANVMRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSY 181 ++ ++ T E ++ KM Y Sbjct: 173 WQEGHTAHATREEAEAEAQKMLHVY 197 >gi|23098021|ref|NP_691487.1| prolyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] gi|81846123|sp|Q8ESQ5|SYP_OCEIH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|22776245|dbj|BAC12522.1| prolyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] Length = 478 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 80/157 (50%), Gaps = 4/157 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G +FGT ++ + DGK +V S+G+ + R++ A+I D +G+ Sbjct: 226 GKALQSGTSHHFGTGFAEAFDINYLDKDGKSQFVHQTSWGL-STRIMGALIMVHGDNRGL 284 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG-CDVFWDDMGEQIGSQFAVADL 397 + P +AP + ++ I H + D ++ +L+KV D+ D + G +F ++ Sbjct: 285 VVPPKIAPTQAMIVPIAQHKEGVLDKAYELRDKLAKVARVDI--DGSDKMPGWKFNEYEM 342 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P++V +G K + +V + R TG +E + + EV Sbjct: 343 KGIPVRVEMGPKDIEKEQVVLVRRDTGEKEFVPVAEV 379 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 5/79 (6%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + D + ++I SYR+LP + Q +++ RP +RS EF ++ ++ Sbjct: 115 PTSEVLFCDYYSNNIHSYRDLPKLYNQWGNVVRWEKTTRP---FLRSSEFHWQEGHTAHA 171 Query: 166 TPEGSKHSYNKMFVSYLRI 184 T E + N+M +Y ++ Sbjct: 172 TDEEATEETNRMLETYAKL 190 >gi|229828744|ref|ZP_04454813.1| hypothetical protein GCWU000342_00810 [Shuttleworthia satelles DSM 14600] gi|229793338|gb|EEP29452.1| hypothetical protein GCWU000342_00810 [Shuttleworthia satelles DSM 14600] Length = 597 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 88/414 (21%), Positives = 164/414 (39%), Gaps = 42/414 (10%) Query: 16 RDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 R+A+ HK + L M H+ + G+ WLP G K + + R R +E++ P Sbjct: 177 REAKERDHKKLGPALELFMFHESAPGMPYWLPRGWKLFNALLDYWRSVHERHNYLEIAAP 236 Query: 73 TLQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLP 129 + + LW SG + Y + M + ++ D++ Y P + +++ ++SYR+LP Sbjct: 237 VINNQKLWATSGHWGHYKENMFIIPGEKEDESDYYAAKPMNCPNAIMFYKNGLRSYRDLP 296 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F Q+ + R E G+ R + F DA+ + + + M ++ I+ Sbjct: 297 FRVSQVDVIHRKEKSGELNGLFRVQMFRQDDAHILVTEDQIASEIADIMSIAD-EIYSTF 355 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 GL RAE D + I D E ++ ++ +D N D + Sbjct: 356 GLS---FRAELSTRPDDFMGD-IATWDKAEAEL---REILDNMYGEGNYD---------V 399 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D+ ++ D+L ++ ++ FG KY+ DG Sbjct: 400 NEGDGAFYGPKIDL---QMKDALGREWQMGTIQLDFQLPLNFGLKYA--------AQDGS 448 Query: 309 DHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + + I G+M ++ + G W V+P+++ ++ I+ EK Sbjct: 449 EKQPVLIHRAIFGSMERFIGILIENFKGSFPFW---VSPYQVGIVPIRTSHNAY---AEK 502 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 I L +G V D + + + L P +++G K V + V + R Sbjct: 503 IQEELRSMGIRVEADYADKNMNEKIKRFRTLRDPYTLVIGDKEVENGTVSVTVR 556 >gi|254466098|ref|ZP_05079509.1| threonyl-tRNA synthetase [Rhodobacterales bacterium Y4I] gi|206687006|gb|EDZ47488.1| threonyl-tRNA synthetase [Rhodobacterales bacterium Y4I] Length = 648 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 84/403 (20%), Positives = 145/403 (35%), Gaps = 58/403 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G K + +R +Q + G +E++ P + LW SG ++ Y + Sbjct: 260 MQEEAPGQIFWHPNGWKVYTTLQDYMRRQQEKGGYVEVNTPQVVDRRLWEASGHWEKYQE 319 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF +KSYR+LP + R E Sbjct: 320 NMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGG 204 G+MR R F DA+ F E + K F+ +L I+ LG + ++ P Sbjct: 380 LHGIMRVRGFTQDDAHIF--CAEDQIEAETKKFIDFLSEIYKDLGFEKFSVKFSDRPEKR 437 Query: 205 DLSHEFIVLADTGETQVF----CSKDFMDFPIPSENTDFD---DIISLNSIVEQWTAPYA 257 S E ++ C+ D P E + + + ++I W Sbjct: 438 SGSDEVWDKSEAALKAATEAAGCAYDLN----PGEGAFYGPKLEFVLTDAIGRDWQCGTL 493 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGS 316 V LPE + AT+ GADG H V + Sbjct: 494 QVDFV--------LPER-----------------------LDATYIGADGAKHRPVMLHR 522 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 +G+ ++ H GK W +AP ++ + +I + +++ A L K G Sbjct: 523 ATLGSFERFIGILIEEHAGKLPFW---LAPRQVVVASITSDADAY---VQEVVAELKKAG 576 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + + P+ + VG + V + V ++ Sbjct: 577 VRAEADIRNEKINYKVREHSVGKVPVILAVGHREVEERTVSVR 619 >gi|288869805|ref|ZP_05976398.2| proline--tRNA ligase [Methanobrevibacter smithii DSM 2374] gi|288860320|gb|EFC92618.1| proline--tRNA ligase [Methanobrevibacter smithii DSM 2374] Length = 469 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 84/389 (21%), Positives = 152/389 (39%), Gaps = 72/389 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+ W+P G + +I+E +R E+ P L A+L E + E+ Sbjct: 26 KGMAVWMPYGFQIRKYTTNLIKEVYDRDHE-EVLFPLLVPEAELAKEGLHVKGFEDEVYW 84 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + + ++ + PT E + ++ I+S+ +LP +YQI FR E + ++R Sbjct: 85 VTHGGKTQLNEKLALRPTSETSIYPMYSLWIRSHIDLPLKYYQIVNTFRYETKHTRPLIR 144 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE K+A++ + E + + +Y IF LG IP P Sbjct: 145 VREITTFKEAHTAHASKEEADIQVQEHIENYKEIFDTLG---IPYTLTKRP--------- 192 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ FP FD I Sbjct: 193 ---------------EWDKFPGADYTMAFDAI---------------------------- 209 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +P+ K +++G I G ++ TF+ DG+ V G+ RV+A+ I Sbjct: 210 MPDGKT-----LQIGTIHNLGQTFAKTFDITFEDKDGEHKLVYQTCAGLSD-RVIASAIG 263 Query: 331 SSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 D KG+ P ++P +I++I I K ++V CE++ G V D+ + Sbjct: 264 IHGDEKGLRLPPEISPKQITIIPILFKKGKEEVLA-KCEELKKEFEAAGLRVNIDNRDIR 322 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 G +F +L G P+++ +G + + ++K Sbjct: 323 PGKKFYDWELKGTPIKLELGPRDLENNKT 351 >gi|298385691|ref|ZP_06995249.1| proline--tRNA ligase [Bacteroides sp. 1_1_14] gi|298261832|gb|EFI04698.1| proline--tRNA ligase [Bacteroides sp. 1_1_14] Length = 497 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 87/163 (53%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I A+L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++++G + + ++ +E+ R T +E ++ + + Y Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCDGIETY 397 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|291294868|ref|YP_003506266.1| prolyl-tRNA synthetase [Meiothermus ruber DSM 1279] gi|290469827|gb|ADD27246.1| prolyl-tRNA synthetase [Meiothermus ruber DSM 1279] Length = 477 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 5/159 (3%) Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y G ++ F+ D ++ YV S+G RVV A++ + D KG+I P +AP + Sbjct: 231 YLGQNFARAFDIQFQDKDQQNKYVHTTSWGF-TTRVVGALVMTHGDDKGLILPPRLAPIQ 289 Query: 349 ISLINIKAHD--QVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVI 405 + ++ I + + A E++Y L G V DD + G +F +L G PL++ Sbjct: 290 VVIVPIYKAETREAVLPAAERLYQELKAAGIRVHLDDRDQYSPGYKFNEWELKGVPLRLE 349 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G + V + RL G +E + + E++ R Sbjct: 350 LGPRDVEAGTAVLASRLGG-KETLQISELLGLLPARLEQ 387 >gi|289803037|ref|ZP_06533666.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 105 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 58/98 (59%), Gaps = 1/98 (1%) Query: 341 PDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 PD++APF+++++ + H ++ EK+Y+ L G +V DD E+ G FA +L+G Sbjct: 1 PDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKERPGVMFADMELIG 60 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 P +++G + + + +E K+R +G + + ++++Y Sbjct: 61 IPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDY 98 >gi|29346339|ref|NP_809842.1| prolyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|81445136|sp|Q8A988|SYP_BACTN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|29338234|gb|AAO76036.1| prolyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] Length = 497 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 87/163 (53%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I A+L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++++G + + ++ +E+ R T +E ++ + + Y Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCDGIETY 397 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|304384417|ref|ZP_07366823.1| proline--tRNA ligase [Prevotella marshii DSM 16973] gi|304334515|gb|EFM00802.1| proline--tRNA ligase [Prevotella marshii DSM 16973] Length = 493 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 84/163 (51%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGV-STRLIGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ +I I + + E+ + L K+G V DD ++ G +FA Sbjct: 295 VLPPKLAPIQVVVIPIARNAEQLSAIDERLRPVIEGLRKLGISVKLDDADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++++G + + + +E+ R T +E + +E ++++ Sbjct: 355 YELKGVPVRLVMGGRDLENGTIELMRRDTLEKETLPIEGIVSH 397 >gi|157964288|ref|YP_001499112.1| threonyl-tRNA synthetase [Rickettsia massiliae MTU5] gi|157844064|gb|ABV84565.1| Threonyl-tRNA synthetase [Rickettsia massiliae MTU5] Length = 651 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 8/161 (4%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 Y L + + RD KL + H + ++G+ W G + + IR++ + Sbjct: 247 YLLMLEEAEKRD----HRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRK 302 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L LW SG + + +M L + +DK + P + IF+ IK Sbjct: 303 NGYTEVKTPVLVDKSLWEVSGHWAKFRDDMFVL-ETDDKTLALKPMNCPCHVQIFKQGIK 361 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP + L R+E G+MR R + DA+ F Sbjct: 362 SYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIF 402 >gi|303238788|ref|ZP_07325320.1| prolyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] gi|302593667|gb|EFL63383.1| prolyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] Length = 481 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/329 (20%), Positives = 130/329 (39%), Gaps = 65/329 (19%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + D + + I+SYR+LP + Q +++ RP +R+ EFL ++ ++ Sbjct: 116 PTSETLFCDHYSNIIQSYRDLPKLYNQWCSVVRWEKTTRP---FLRTVEFLWQEGHTAHA 172 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 T E ++ KM Y AD FC K Sbjct: 173 TAEDAQEETIKMLNVY--------------------------------AD------FCEK 194 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 I + TD + A + S +H+ K S G Sbjct: 195 VLAIPVIKGQKTDKEKFAGAK-------ATFTIESLMHDGKALQS--------------G 233 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 FG ++ + + + YV S+G+ + R++ +I D G++ P +A Sbjct: 234 TSHNFGDGFAQAFGIQYTDQNNQLQYVHQTSWGV-STRLIGGIIMVHGDDNGLVLPPKIA 292 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P ++ +I + H + + I RL+ G V DD + G +++ ++ G P+++ Sbjct: 293 PIQVVVIPVSQHKEGVLEKAYAIRDRLAAKGIRVKIDDSDKMPGWKYSEYEMKGVPIRLE 352 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G K + ++ + R++ + +SL+E+ Sbjct: 353 IGPKDIEKNQAVLVTRVSREKLFISLDEL 381 >gi|148642347|ref|YP_001272860.1| prolyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061] gi|222444465|ref|ZP_03606980.1| hypothetical protein METSMIALI_00076 [Methanobrevibacter smithii DSM 2375] gi|172048060|sp|A5UJW4|SYP_METS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148551364|gb|ABQ86492.1| prolyl-tRNA synthetase, ProS [Methanobrevibacter smithii ATCC 35061] gi|222434030|gb|EEE41195.1| hypothetical protein METSMIALI_00076 [Methanobrevibacter smithii DSM 2375] Length = 469 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 84/389 (21%), Positives = 152/389 (39%), Gaps = 72/389 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+ W+P G + +I+E +R E+ P L A+L E + E+ Sbjct: 26 KGMAVWMPYGFQIRKYTTNLIKEVYDRDHE-EVLFPLLVPEAELAKEGLHVKGFEDEVYW 84 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + + ++ + PT E + ++ I+S+ +LP +YQI FR E + ++R Sbjct: 85 VTHGGKTQLNEKLALRPTSETSIYPMYSLWIRSHIDLPLKYYQIVNTFRYETKHTRPLIR 144 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE K+A++ + E + + +Y IF LG IP P Sbjct: 145 VREITTFKEAHTAHASKEEADIQVQEHIENYKEIFDTLG---IPYTLTKRP--------- 192 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ FP FD I Sbjct: 193 ---------------EWDKFPGADYTMAFDAI---------------------------- 209 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +P+ K +++G I G ++ TF+ DG+ V G+ RV+A+ I Sbjct: 210 MPDGKT-----LQIGTIHNLGQTFAKTFDITFEDKDGEHKLVYQTCAGLSD-RVIASAIG 263 Query: 331 SSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 D KG+ P ++P +I++I I K ++V CE++ G V D+ + Sbjct: 264 IHGDEKGLRLPPEISPKQITIIPILFKKGKEEVLA-KCEELKKEFEAAGLRVNIDNRDIR 322 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 G +F +L G P+++ +G + + ++K Sbjct: 323 PGKKFYDWELKGTPIKLELGPRDLENNKT 351 >gi|322371434|ref|ZP_08045983.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320548966|gb|EFW90631.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 645 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 3/163 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + HS G ++ P G + +RE+ G E+ P L +LW +SG YD + + Sbjct: 259 VPDHSPGCVNFHPNGMAIRRELEEYVREKNAELGYEEVKTPELNHTELWKKSGHYDHFKE 318 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 E A ++N P + I+ +SYR+LP F + + +R+E G+ Sbjct: 319 EGEMFAWEQNGHEYGLKPMNCANHAHIYDDQRRSYRDLPLRFSEFGMCYRNEQSGELSGM 378 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 +R R F D ++F + PEG + + ++ GL + Sbjct: 379 LRVRGFTQDDGHAF-VRPEGIREEIARTLSVIDGMYEAFGLDA 420 >gi|218130015|ref|ZP_03458819.1| hypothetical protein BACEGG_01598 [Bacteroides eggerthii DSM 20697] gi|217987818|gb|EEC54144.1| hypothetical protein BACEGG_01598 [Bacteroides eggerthii DSM 20697] Length = 646 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 92/428 (21%), Positives = 157/428 (36%), Gaps = 67/428 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + +R Q R E+ P + + L++ SG Y YGK+ + Sbjct: 261 KGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQP 320 Query: 97 ADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ Y P + I+++ +SY++LP + R E G+ R R Sbjct: 321 IHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K + ++ +F + ++ + I L Sbjct: 381 SFTQDDAHIF-CRPDQVKDEFLRVMDIISIVFQSMHFENFEAQ--------------ISL 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A + EK + E Sbjct: 426 RDKVNREKYIGSD-----------------------ENWEKAEQAIIEACEEKGLKAKVE 462 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP + GAD + H V + Sbjct: 463 YGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPF 522 Query: 320 GAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G+M R VA +IE + GK +W PD VA IS + D +++ L + Sbjct: 523 GSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNDYAQEVKDYLKRYD 573 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D+ E+IG + ++ P +IVG K + +V ++ + G + M EE Sbjct: 574 VRAIVDERNEKIGRKIRDNEMKRIPYMLIVGEKEAENREVSVRKQGEGDQGTMKFEEFAK 633 Query: 437 YASHRFSN 444 + N Sbjct: 634 KVNEEVQN 641 >gi|189501972|ref|YP_001957689.1| threonyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2] gi|189497413|gb|ACE05960.1| hypothetical protein Aasi_0559 [Candidatus Amoebophilus asiaticus 5a2] Length = 644 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 85/419 (20%), Positives = 158/419 (37%), Gaps = 67/419 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-- 95 G+ WLP G + + +R Q + G + P + +L++ SG YD YG++ + Sbjct: 266 GLPLWLPRGTVLREQLEQFLRRAQVKAGYQPVVTPHIGHKELYMTSGHYDKYGEDSFQPI 325 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + P + +I++ +SYR+LP + +R E G++R+R Sbjct: 326 RTPHEGEEFFLKPMNCPHHCEIYKHEPRSYRDLPVRLAEFGTVYRYEQHGELHGLVRTRG 385 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ IF R + EF + Sbjct: 386 FTQDDAH----------------------IFCR---------------NDQVREEFAKVI 408 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFDSL 271 D T VF + F D+ + F D L+ + E W A +V + ++ Sbjct: 409 DL-VTYVFSALGFSDY---TARLSFRDPEQLHKYIGDQEDWDKAEEAIEEVAKLRKLNTT 464 Query: 272 PENKRVSARGIE--------VGHIFYFGT---KYSLPM--SATFKGADGKDHY-VQMGSY 317 + G + +G + GT Y LP+ ++ GAD K H V + Sbjct: 465 KALGEAAFYGPKLDFMVKDALGRNWQLGTVQLDYQLPVRFDLSYTGADNKKHRPVMIHRA 524 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ A++ GK +W +AP +++++ I + E++ L Sbjct: 525 PFGSLERFIAILLEHTAGKLPLW---LAPEQVAILPI---SEKFAAYAEEVNQNLRNKDI 578 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 F D E+IG + A+L P I+G K + V ++ + G + +++++ Sbjct: 579 RCFIDHRDEKIGKKIREAELSKIPYMFIIGEKEQLERTVSVRKQGAGDQGSFPIDKLVQ 637 >gi|257869801|ref|ZP_05649454.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257803965|gb|EEV32787.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 477 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/173 (21%), Positives = 83/173 (47%), Gaps = 3/173 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GTK++ T+ + K Y S+G+ + R++ A+I + D G+ Sbjct: 214 GKAVQAGTSHYMGTKFAEAFDITYLSKENKHTYAHTTSWGV-STRLLGALIMTHGDENGL 272 Query: 339 IWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 ++P ++AP +I L+ + + + E+++A G V DD G +F + Sbjct: 273 VFPPTIAPTQIVLMPVGPWKKNPAILEKLEELFASFKAKGIRVRLDDSDNSPGYKFNEWE 332 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L G L++ G + + + V +K R ++ ++ +++ ++ + + P L Sbjct: 333 LKGACLRIECGPRDLENGHVMVKVRDLAEKQTVAFDDLADFVDQQLAAMTPRL 385 >gi|253568239|ref|ZP_04845650.1| prolyl-tRNA synthetase [Bacteroides sp. 1_1_6] gi|251842312|gb|EES70392.1| prolyl-tRNA synthetase [Bacteroides sp. 1_1_6] Length = 497 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 87/163 (53%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I A+L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++++G + + ++ +E+ R T +E ++ + + Y Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCDGIETY 397 Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSY 181 ++ ++ T + ++ +M Y Sbjct: 173 WQEGHTAHATRKEAEEEAIRMLNVY 197 >gi|119505276|ref|ZP_01627351.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] gi|119458967|gb|EAW40067.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] Length = 639 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 96/434 (22%), Positives = 160/434 (36%), Gaps = 72/434 (16%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD + KL L + + G+ W P G + + +R++Q R Sbjct: 231 YLNRIAEAEKRDHRKIAKKLDLF--HTQEEAPGMVFWHPAGWTIYQVIESYMRKQQLRFD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG D + M L D +D+ P + +F +KSY Sbjct: 289 YEEIKTPQVVDISLWQRSGHADKFASGMFTL-DADDRQFAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F E S F+ Sbjct: 348 RDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIF--CTEAQIQSEVATFI----- 400 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 D+ HE V AD G T+V TD+D + Sbjct: 401 --------------------DMLHE--VYADFGFTEVIYRLSTRPAERVGSETDWDRAEA 438 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE------VGHIFYFGT---KYS 295 + D++ ++ LP IE +G ++ GT +S Sbjct: 439 ALAEA-------LDAKDLN----WEMLPGEGAFYGPKIEFSLKDCIGRVWQLGTIQVDFS 487 Query: 296 LP--MSATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 +P + A + DG H +GS+ R + +IE ++G+ +W S Sbjct: 488 MPGRLDAQYVAEDGSRQVPVMLHRAVLGSF----ERFIGILIE-HYEGEFPLWLASQQAI 542 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + + +++ A L + G V D E+IG + +L PL ++VG Sbjct: 543 VAPITDKQGA------YAQQVAADLKEAGFRVGTDLRNEKIGFKIREHELAKVPLVLVVG 596 Query: 408 SKFVSDSKVEIKHR 421 K ++ V ++ R Sbjct: 597 DKEMAAGTVAVRGR 610 >gi|319653797|ref|ZP_08007892.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317394523|gb|EFV75266.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 479 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 79/160 (49%), Gaps = 3/160 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GTK++ + + K +V S+G + R++ +VI D +G+ Sbjct: 216 GKAVQAGTSHYLGTKFAEAFDIKYLNKENKHTFVHTTSWGT-STRLIGSVIMVHGDEQGL 274 Query: 339 IWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P +AP ++ LI + + + ++I+A L G V DD + G +F + Sbjct: 275 VLPPKIAPTQVVLIPVGPWKKNPAIMEKLDEIFAALKAEGIRVRLDDSDQSPGYKFNEWE 334 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L G P+++ +G + + ++ +K R G + + LE +I+ Sbjct: 335 LKGVPVRIELGPRDLDQNQCLMKARDLGDKVAVPLEAIID 374 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ IKSYR+LP Q FR E + +R+ EFL ++ ++ + Sbjct: 105 PTSETMIGHLYSDWIKSYRDLPVLINQWANVFRWE-KKTLPFIRTSEFLWQEGHTAHVDE 163 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 E ++ +M Y + GL +IP+ Sbjct: 164 EDARKETMQMLSIYKEVVE--GLLAIPV 189 >gi|302063985|ref|ZP_07255526.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40] Length = 590 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTQSESRDYAI-KPMNCPCHVQVFNQGLKSYRELPLRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY-LRIFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ L ++ G K Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIKLTLDVYADFGFK 413 Query: 192 SIPMRAESGP---IGGD 205 I ++ + P +G D Sbjct: 414 DIELKLSTRPEKRVGSD 430 >gi|292670652|ref|ZP_06604078.1| threonine-tRNA ligase [Selenomonas noxia ATCC 43541] gi|292647679|gb|EFF65651.1| threonine-tRNA ligase [Selenomonas noxia ATCC 43541] Length = 639 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 92/386 (23%), Positives = 147/386 (38%), Gaps = 51/386 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H+ G + P G + + RE R G E+S P + S LW SG + Y + Sbjct: 257 LHEEGPGFPFFHPNGMILRNALLEYWREVHRRYGYQEISTPVILSRKLWETSGHWFHYRE 316 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + ++RS + SYR+LP ++ L R EL G+ Sbjct: 317 NMYTTEIDGEDYAI--KPMNCPGCMLVYRSQLHSYRDLPLRLAELGLVHRHELSGALHGL 374 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 R R F DA+ F +TP+ + + ++ GL S + P S E Sbjct: 375 FRVRNFTQDDAHLF-VTPDQIEGEIQHTINLFDEVYRTFGL-SYKAELSTRPEDSMGSDE 432 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 LA G EN D I++ E A Y D H L D Sbjct: 433 MWDLATEGLRNAL------------ENRGLDYIVN-----EGDGAFYGPKIDFH---LRD 472 Query: 270 SLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMR 323 S +G + GT SLP T+ G DG+ H V + G++ Sbjct: 473 S-------------IGRTWQCGTIQLDMSLPEKFDLTYIGEDGEKHRPVMLHRVVYGSIE 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ ++ G +W +AP ++ ++ I E + R+ +G V DD Sbjct: 520 RFIGILIENYAGAFPVW---MAPVQVRILPITERHTAY---AESLRGRMFDLGIRVEVDD 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSK 409 E+ G + + + P ++VG + Sbjct: 574 RNEKTGYKIRESQVKKTPYTLVVGDQ 599 >gi|116492462|ref|YP_804197.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] gi|122266074|sp|Q03GB7|SYT_PEDPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116102612|gb|ABJ67755.1| Ser-tRNA(Thr) hydrolase [Pediococcus pentosaceus ATCC 25745] Length = 648 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 83/388 (21%), Positives = 160/388 (41%), Gaps = 37/388 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G ++ I +++ + G + P L + D + SG + Y ++M Sbjct: 263 GLPYWMPNGATIRRSIERYIIDKEVKHGYQHVYTPVLMNLDAYKTSGHWQHYREDMFPPM 322 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + +++ HI+SYR LP ++ + R E G+ R RE Sbjct: 323 DMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 382 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ + + K+ + ++ + R LS+ D Sbjct: 383 TLNDGHTF-VAPDQIQAEFKKVLQLMVEVYRDFNITDYTFR---------LSYR-----D 427 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S D + L+ + E A Y DV + +L Sbjct: 428 PANTEKYFDDDEMWNKSQSMLKAAMDDLGLDYVEAEGEAAFYGPKLDVQTKT---ALGNE 484 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L + GADG++H M G+ + R A +IE Sbjct: 485 ETLSTIQLD----FMLPKQFDL----HYVGADGEEHRPVMIHRGLVSTMERFTAYLIEMY 536 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++++I +K D + +K+ + V D E++G + Sbjct: 537 ---KG-AFPTWLAPKQVTIIPVK--DDLHGAYADKLREEMVDKDIRVEVDHRNEKMGYKI 590 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKH 420 A P ++VG + ++ V ++H Sbjct: 591 REAQTQKIPYILVVGDNELENNSVSVRH 618 >gi|307545104|ref|YP_003897583.1| threonyl-tRNA synthetase [Halomonas elongata DSM 2581] gi|307217128|emb|CBV42398.1| threonyl-tRNA synthetase [Halomonas elongata DSM 2581] Length = 632 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 93/430 (21%), Positives = 160/430 (37%), Gaps = 55/430 (12%) Query: 2 RRSKYFLPILQENPRDAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIR 58 ++ K +L L+E AE H KL + + H + + G+ W P G V +R Sbjct: 226 KQLKAYLKRLEE----AEKRDHRKLARKLDLFHMQEEAPGMVFWHPRGWTLWQVVEQYMR 281 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 + G E+ P + LW +SG +D+Y M + + P + +F Sbjct: 282 QVYKDGGYQEIRCPQVMDVSLWKKSGHWDNYADGMF-FTESEKREYALKPMNCPGHVQVF 340 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 S ++SYR LP + + R+E G+MR R F D + F T E + Sbjct: 341 NSGLRSYRELPVRYGEFGGCHRNEPSGALHGIMRVRAFTQDDGHVF-CTEEQIEPEVTSF 399 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 L+++ G + I ++ P +G D + A G + C D+ + P Sbjct: 400 HRQALQVYRDFGFEDIAVKIALRPEKRLGDDAVWDRAEEALRGALRT-CDVDWDELPGEG 458 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 A Y + H + D L +V ++ + Sbjct: 459 -------------------AFYGPKIEYH---MKDCLGREWQVGTMQVD----------F 486 Query: 295 SLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 +P + A + DG+ V + +G+M ++ + G +W +AP + + Sbjct: 487 MMPVRLGAQYVAEDGERRSPVMLHRAIVGSMERFIGILIEHYAGAMPLW---LAPQQAVV 543 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + I RD + RL K G V D E+IG + L P ++VG K V Sbjct: 544 LTIT---DAQRDYATYLEQRLQKKGLRVKADLRNEKIGFKIREHTLQKVPYLLVVGDKEV 600 Query: 412 SDSKVEIKHR 421 V ++ R Sbjct: 601 EADSVAVRSR 610 >gi|303237224|ref|ZP_07323794.1| threonine--tRNA ligase [Prevotella disiens FB035-09AN] gi|302482611|gb|EFL45636.1| threonine--tRNA ligase [Prevotella disiens FB035-09AN] Length = 649 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 91/430 (21%), Positives = 153/430 (35%), Gaps = 85/430 (19%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + ++R+ Q E+ P + +L+V SG Y YGK+ + Sbjct: 262 GKGLPIWLPKGTQVRLRLQEVLRKLQRPYHYQEVITPGIGGKNLYVTSGHYAHYGKDAFQ 321 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + +IF +SY++LP + FR E G+ R Sbjct: 322 PIQTPEEGEEYMLKPMNCPHHCEIFAHKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRV 381 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F + PE K + + ++F G ++ + I Sbjct: 382 RTFTQDDAHLF-VRPEQVKKEFEDVIDIIQKVFITFGFENYEAQ--------------IS 426 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 L D + + + D E W +E+ Sbjct: 427 LRDPDDKEKYIGSD-----------------------EIWE---------ESERAIKEAC 454 Query: 273 ENKRVSARGIEVGHIFYFGTK---------------------YSLP--MSATFKGADG-K 308 E K + AR +E+G ++G K Y+LP + D K Sbjct: 455 EEKGLKAR-VEIGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNTK 513 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACE 366 V + G++ AV+ G +W PD VA IS + E Sbjct: 514 QTPVMIHRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNGYAE 565 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++ A DD E+IG + +L P VIVG + ++D V ++ + G + Sbjct: 566 EVRAYFEANEVRAIVDDRNEKIGRKIRDNELKRVPYMVIVGEQEMADGLVSMRQQGGGEQ 625 Query: 427 EDMSLEEVIN 436 M E+ + Sbjct: 626 ATMPKEDFVK 635 >gi|43066|emb|CAA23560.1| unnamed protein product [Escherichia coli] Length = 642 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 625 >gi|324119204|gb|EGC13092.1| threonyl-tRNA synthetase [Escherichia coli E1167] Length = 642 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 625 >gi|256026433|ref|ZP_05440267.1| threonyl-tRNA synthetase [Fusobacterium sp. D11] gi|289764445|ref|ZP_06523823.1| threonyl-tRNA synthetase [Fusobacterium sp. D11] gi|289716000|gb|EFD80012.1| threonyl-tRNA synthetase [Fusobacterium sp. D11] Length = 637 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 90/433 (20%), Positives = 178/433 (41%), Gaps = 52/433 (12%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + L + ++ G +LP G + + + R+E + G +++ P Sbjct: 236 EAEKRDHRKLGKELELFFLSEYGPGFPFFLPKGMIVRNVLVDLWRKEHEKAGYLQLETPI 295 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + + +LW SG + +Y +E + ++ ++ P + F+ + SY++LP Sbjct: 296 MLNKELWEISGHWFNY-RENMYTSEIDEVEFAIKPMNCPGGVLAFKHQLHSYKDLPARLA 354 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ R E G+MR R F D++ F +TP+ + +G+ + Sbjct: 355 ELGKVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEI-------------IGVVN 400 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 + + S G E+ + T + S++ D + D + I Sbjct: 401 LIDKFYSKLFG----FEYEIELSTKPEKAIGSQEIWDMAESALAGALDKLGRKYKINPGD 456 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG 307 A Y D K+ D+ +G ++ GT ++LP T+ G DG Sbjct: 457 GAFYGPKLDF---KIKDA-------------IGRMWQCGTIQLDFNLPERFDVTYIGEDG 500 Query: 308 KDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + H V + G++ ++ + G +W +AP ++ ++ I + C + Sbjct: 501 EKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMW---LAPVQVKVMTI---NDECVPYAK 554 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +I A+L K+G DD E IG + A+ P+Q+I+G V + +V I+ + Sbjct: 555 EIMAKLDKLGIRAELDDRTETIGYKIREANGRYRIPMQLIIGKNEVENKEVNIRRFGSKD 614 Query: 426 REDMSLEEVINYA 438 + SL+E NY Sbjct: 615 QFSKSLDEFYNYV 627 >gi|170768863|ref|ZP_02903316.1| threonyl-tRNA synthetase [Escherichia albertii TW07627] gi|170122411|gb|EDS91342.1| threonyl-tRNA synthetase [Escherichia albertii TW07627] Length = 642 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 625 >gi|254447322|ref|ZP_05060789.1| threonyl-tRNA synthetase [gamma proteobacterium HTCC5015] gi|198263461|gb|EDY87739.1| threonyl-tRNA synthetase [gamma proteobacterium HTCC5015] Length = 637 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 96/449 (21%), Positives = 174/449 (38%), Gaps = 69/449 (15%) Query: 5 KYFLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K L +L+E AE H+ + ++ + H + + G+ W G + V IR+ Sbjct: 229 KAHLTMLEE----AEKRDHRKLAKSLDLFHMQEEAPGMVFWHDKGWQIYVQVQDYIRQLL 284 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + E+ P + LW +SG +D +G +M+ ++ P + I+ Sbjct: 285 RQHDYQEVHTPQVVDRVLWEKSGHWDKFG-DMIFSTHSENRDYAVKPMNCPCHVQIYNQG 343 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP + R+E G+MR R F+ DA+ F E S F+ Sbjct: 344 LKSYRDLPLRMAEFGSCHRNEPSGTLHGLMRVRNFVQDDAHIF--CTEDQIQSEVSAFID 401 Query: 181 YL-RIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGET--QVFCSKDFMDFPI-P 233 + +++ G + + + + P +G D L D E +V + +DF + P Sbjct: 402 LVFQVYKDFGFEEVQVALSTRPEERVGED------ALWDKAENALEVALNNKDLDFTLQP 455 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT- 292 E + I L D L G ++ GT Sbjct: 456 GEGAFYGPKIEF--------------------ALKDCL-------------GRVWQCGTI 482 Query: 293 --KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 +S+P + A + DG + V + +G++ ++ H+G+ +W +AP Sbjct: 483 QVDFSMPTRLEADYVAEDGSRKTPVMLHRAILGSLERFIGILIEEHEGRFPVW---LAPV 539 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + +++NI D EK L G V D E+IG + L P +VG Sbjct: 540 QAAILNITDKQA---DFVEKARQTLENQGLRVVSDLRNEKIGFKIREHTLQRVPYLFVVG 596 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + V + V ++ R M+++E + Sbjct: 597 DREVENESVAVRTRSGEDLGTMTVDEAVQ 625 >gi|68487989|ref|XP_712153.1| hypothetical protein CaO19.6701 [Candida albicans SC5314] gi|68488040|ref|XP_712128.1| hypothetical protein CaO19.13993 [Candida albicans SC5314] gi|77023056|ref|XP_888972.1| hypothetical protein CaO19_6701 [Candida albicans SC5314] gi|46433496|gb|EAK92934.1| hypothetical protein CaO19.13993 [Candida albicans SC5314] gi|46433523|gb|EAK92960.1| hypothetical protein CaO19.6701 [Candida albicans SC5314] gi|76573785|dbj|BAE44869.1| hypothetical protein [Candida albicans] Length = 691 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 74/346 (21%), Positives = 137/346 (39%), Gaps = 72/346 (20%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 287 DEHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEG 346 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ LT + + + ++ Y ++ L ++P +V E + Sbjct: 347 HTAHLTKDAAANEVLQILDYYAGVYEEL--LAVP----------------VVKGKKTENE 388 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F D+ + VE + A + R Sbjct: 389 KFAGGDY------------------TTTVEGFIA----------------------ATGR 408 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKG 337 GI+ G + GT +S + + + +G + + S+G+ + RV+ +I + D KG Sbjct: 409 GIQGGTSHHLGTNFSKMFNISVENPEGSEKPRIFAYQNSWGL-STRVIGVMIMTHSDNKG 467 Query: 338 IIWPDSVAPFKISLINI-------KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE--QI 388 ++ P +A ++ +I + A + + EKI L G V D E Sbjct: 468 LVLPPRIAQYQAVVIPVGLTSKSTDAQRKEINEGAEKIEQSLRANGIRVT-GDYREIYNP 526 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +FA +L G PL+ G K ++ ++V I R G + + L+E+ Sbjct: 527 GWKFADWELKGVPLRFEFGPKDLAGNQVTIVRRNDGKKYTVKLDEL 572 >gi|317476770|ref|ZP_07936013.1| threonyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] gi|316906945|gb|EFV28656.1| threonyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 646 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 92/428 (21%), Positives = 157/428 (36%), Gaps = 67/428 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + +R Q R E+ P + + L++ SG Y YGK+ + Sbjct: 261 KGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQP 320 Query: 97 ADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ Y P + I+++ +SY++LP + R E G+ R R Sbjct: 321 IHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K + ++ +F + ++ + I L Sbjct: 381 SFTQDDAHIF-CRPDQVKDEFLRVMDIISIVFQSMHFENFEAQ--------------ISL 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A + EK + E Sbjct: 426 RDKVNREKYIGSD-----------------------ENWEKAEQAIIEACEEKGLKAKVE 462 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP + GAD + H V + Sbjct: 463 YGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPF 522 Query: 320 GAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G+M R VA +IE + GK +W PD VA IS + D +++ L + Sbjct: 523 GSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNDYAQEVKDYLKRYD 573 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D+ E+IG + ++ P +IVG K + +V ++ + G + M EE Sbjct: 574 VRAIVDERNEKIGRKIRDNEMKRIPYMLIVGEKEAENREVSVRKQGEGDQGTMKFEEFAK 633 Query: 437 YASHRFSN 444 + N Sbjct: 634 KVNEEVQN 641 >gi|153870648|ref|ZP_02000004.1| threonyl-tRNA synthetase, class IIa [Beggiatoa sp. PS] gi|152072888|gb|EDN69998.1| threonyl-tRNA synthetase, class IIa [Beggiatoa sp. PS] Length = 390 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 82/372 (22%), Positives = 143/372 (38%), Gaps = 70/372 (18%) Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E+ P L LW +SG +D +G +M N + + P + IF +KSYR+ Sbjct: 46 EVHTPQLVDRSLWEKSGHWDKFGDDMFVTQSENREYAV-KPMNCPCHIQIFNQGLKSYRD 104 Query: 128 LPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP + R+E G+MR R F+ DA+ F T + + + +++ Sbjct: 105 LPLRLAEFGSCHRNEASGTLHGLMRIRGFVQDDAHIF-CTDDQIQQEVSDFIDLLFKVYT 163 Query: 187 RLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 G K+I ++ + P +G D Sbjct: 164 DFGFKNILIKLSTRPEKRVGSD-------------------------------------- 185 Query: 244 SLNSIVEQW-TAPYAATSDVHNEKL-FDSLPENKRVSARGIE------VGHIFYFGT--- 292 E W A A ++N+KL +D P IE + ++ GT Sbjct: 186 ------EVWDKAEKALELALNNKKLAWDLQPGEGAFYGPKIEFVLKDCLDRVWQCGTIQV 239 Query: 293 KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 +S+P + AT+ ADG V + +G++ V+ + G +W +AP ++ Sbjct: 240 DFSMPDRLGATYIAADGSKQVPVMLHRAILGSLERFIGVLIEEYAGALPLW---LAPVQV 296 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 ++NI D ++I +L K G V D E+IG + L P +I+G + Sbjct: 297 VILNITDEHA---DYAKQIEVKLLKEGFRVESDLRNEKIGFKIREHTLQKIPYLLIIGGR 353 Query: 410 FVSDSKVEIKHR 421 + +V ++ R Sbjct: 354 EIETQQVTVRLR 365 >gi|227885859|ref|ZP_04003664.1| threonine--tRNA ligase [Escherichia coli 83972] gi|300898493|ref|ZP_07116830.1| threonyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300917719|ref|ZP_07134368.1| threonyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300930805|ref|ZP_07146177.1| threonyl-tRNA synthetase [Escherichia coli MS 187-1] gi|300951319|ref|ZP_07165163.1| threonyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300958608|ref|ZP_07170733.1| threonyl-tRNA synthetase [Escherichia coli MS 175-1] gi|301050944|ref|ZP_07197793.1| threonyl-tRNA synthetase [Escherichia coli MS 185-1] gi|301647910|ref|ZP_07247687.1| threonyl-tRNA synthetase [Escherichia coli MS 146-1] gi|227837432|gb|EEJ47898.1| threonine--tRNA ligase [Escherichia coli 83972] gi|300297398|gb|EFJ53783.1| threonyl-tRNA synthetase [Escherichia coli MS 185-1] gi|300314733|gb|EFJ64517.1| threonyl-tRNA synthetase [Escherichia coli MS 175-1] gi|300357845|gb|EFJ73715.1| threonyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300415120|gb|EFJ98430.1| threonyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300449416|gb|EFK13036.1| threonyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300461363|gb|EFK24856.1| threonyl-tRNA synthetase [Escherichia coli MS 187-1] gi|301073967|gb|EFK88773.1| threonyl-tRNA synthetase [Escherichia coli MS 146-1] gi|312946320|gb|ADR27147.1| threonyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C] gi|313649261|gb|EFS13695.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|315618916|gb|EFU99499.1| threonyl-tRNA synthetase [Escherichia coli 3431] gi|323169354|gb|EFZ55030.1| threonyl-tRNA synthetase [Shigella sonnei 53G] gi|323186901|gb|EFZ72219.1| threonyl-tRNA synthetase [Escherichia coli RN587/1] gi|324007092|gb|EGB76311.1| threonyl-tRNA synthetase [Escherichia coli MS 57-2] gi|332090644|gb|EGI95739.1| threonyl-tRNA synthetase [Shigella boydii 5216-82] gi|332093917|gb|EGI98970.1| threonyl-tRNA synthetase [Shigella dysenteriae 155-74] gi|332759227|gb|EGJ89536.1| threonyl-tRNA synthetase [Shigella flexneri K-671] gi|332762542|gb|EGJ92807.1| threonyl-tRNA synthetase [Shigella flexneri 4343-70] gi|332767218|gb|EGJ97413.1| threonyl-tRNA synthetase [Shigella flexneri 2930-71] gi|333018198|gb|EGK37500.1| threonyl-tRNA synthetase [Shigella flexneri K-304] Length = 622 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 412 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 605 >gi|325570709|ref|ZP_08146435.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325156555|gb|EGC68735.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 477 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 3/173 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GTK++ T+ + K + S+G+ + R++ A+I + D G+ Sbjct: 214 GKAVQAGTSHYMGTKFAEAFDITYLTKENKHVHAHTTSWGV-STRLLGALIMTHGDENGL 272 Query: 339 IWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 ++P ++AP ++ L+ + + + E++YA G V DD G +F + Sbjct: 273 VFPPTIAPTQVVLLPVGPWKKNPAILEKLEELYANFKAKGIRVRLDDSDNSPGYKFNEWE 332 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 L G L++ G + + KV +K R ++ ++LE++ + P L Sbjct: 333 LKGACLRIECGPRDLEAGKVMVKVRDLADKQTVALEDLEAFVDQELQAMTPRL 385 >gi|313206166|ref|YP_004045343.1| prolyl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|312445482|gb|ADQ81837.1| prolyl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|315023150|gb|EFT36163.1| prolyl-tRNA synthetase [Riemerella anatipestifer RA-YM] gi|325336389|gb|ADZ12663.1| Prolyl-tRNA synthetase [Riemerella anatipestifer RA-GD] Length = 491 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 85/162 (52%), Gaps = 5/162 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ F +GK Y S+G+ + R++ A+I S D G++ Sbjct: 234 KALQAGTSHFLGQNFAEAFDVKFTNKEGKIEYAWATSWGV-STRLMGALIMSHSDDNGLV 292 Query: 340 WPDSVAPFKISLINI-KAHDQVCR--DACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVA 395 P S+AP ++ ++ I K +Q+ + + ++ ++L +G V +D+ + G +FA Sbjct: 293 LPPSLAPIQVVIVPIFKGEEQLKQIDEVAYELQSKLKALGISVKYDNRDTHKPGWKFAEY 352 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ G P+++ +G++ + + VEI R T +E L+ + Y Sbjct: 353 EMKGVPVRIAMGARDLENKTVEIARRDTLSKEVKPLDNIEVY 394 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ ++SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 115 EEELIVRPTSEAIIWNTYKNWVQSYRDLPILINQWANVVRWEMRTRL-FLRTAEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T E + +M Y Sbjct: 174 HTAHATKEEAIAETEQMLNVY 194 >gi|71066652|ref|YP_265379.1| threonyl-tRNA synthetase [Psychrobacter arcticus 273-4] gi|123775558|sp|Q4FPW3|SYT_PSYA2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71039637|gb|AAZ19945.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Psychrobacter arcticus 273-4] Length = 644 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 90/409 (22%), Positives = 151/409 (36%), Gaps = 72/409 (17%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q G E+ P + LW SG + +Y Sbjct: 255 MQEQAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYEEIKTPQIVDRSLWERSGHWGNYAT 314 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + ++ D A+ P + +F +KSYR+LP + R+E G+ Sbjct: 315 NMFTTSSEKRDYAV--KPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDL 206 MR R F DA+ F T + L ++ G +I M+ + P +G D Sbjct: 373 MRVRGFTQDDAHIF-CTQSQIQQEVADFIKLTLAVYEDFGFNNIIMKLSTRPEKRVGSDE 431 Query: 207 SHEFI--VLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 S +F LAD +D+ +P E + I + Sbjct: 432 SWDFAEKALADA------LDNSGLDWAYLPGEGAFYGPKIEFS----------------- 468 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP-----MSATFKGADGKD------HYV 312 L DSL G ++ GT P + A F + H Sbjct: 469 ---LKDSL-------------GRVWQCGTIQVDPNMPERLDAEFVNEQNEREVPIMLHRA 512 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 +GS+ R + +IE ++ G +W +AP ++ ++NI +ACE + L Sbjct: 513 ILGSF----ERFIGILIE-NYAGWMPVW---LAPQQVVVMNITDKQA---EACENVVNEL 561 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 K G D E+IG + L P +++G K V V ++ R Sbjct: 562 KKSGLRAISDLRNEKIGFKIREKTLERIPYMLVLGDKEVESGSVNVRTR 610 >gi|332885366|gb|EGK05615.1| threonyl-tRNA synthetase [Dysgonomonas mossii DSM 22836] Length = 650 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 97/434 (22%), Positives = 159/434 (36%), Gaps = 90/434 (20%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + +++ Q + ++ P + S L+V SG Y YG++ + Sbjct: 261 KGLPLWLPRGTQLRLKLEDFLKKIQKKFEYQQVMTPHIGSKLLYVTSGHYAKYGQDSFQP 320 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + + P + +I++ +SYR+LP + +R E G+ R R Sbjct: 321 IHTPEEGEEFLLKPMNCPHHCEIYKIVPRSYRDLPLRMAEFGTVYRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TPE K + K+ IF L ++ + I L Sbjct: 381 GFTQDDAHIF-CTPEQLKEEFLKVMDIVFIIFKALNFENFEAQ--------------ISL 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D W A + EK LP Sbjct: 426 RDPNNREKYIGSD-----------------------ANWEKAERAIIEACEEK---GLP- 458 Query: 274 NKRVSARGIEVGHIFYFGTK---------------------YSLP--MSATFKGADGKDH 310 AR +E+G ++G K Y+LP + GAD + H Sbjct: 459 -----AR-VELGEAAFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFELEYTGADNQKH 512 Query: 311 Y-VQMGSYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACE 366 V + G+M R +A +IE + GK +W PD V IS + D Sbjct: 513 RPVMIHRAPFGSMERFIAVLIEHTA-GKFPLWLAPDQVVILPIS--------EKFNDYAH 563 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++ + G DD E+IG + +L P +IVG K +V I+ + G + Sbjct: 564 RVSHYFKQQGISSQVDDRNEKIGRKIRDNELKRIPYLLIVGEKEAESEEVSIRKQGDGDK 623 Query: 427 EDMSLEEVINYASH 440 M +N+A+ Sbjct: 624 GSMKF---VNFAAQ 634 >gi|293376513|ref|ZP_06622741.1| proline--tRNA ligase [Turicibacter sanguinis PC909] gi|292644739|gb|EFF62821.1| proline--tRNA ligase [Turicibacter sanguinis PC909] Length = 476 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 83/407 (20%), Positives = 164/407 (40%), Gaps = 75/407 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG P G +N+ + ++ TG + +P L + L E+ + + E+ Sbjct: 36 KGCMIIRPYGYAIWENIQQYLDQKFKETGHENVYMPMLIPESLLQKEADHVEGFAPEVAW 95 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + ++ + ++ PT E + D + I+SY +LP + Q +++ RP Sbjct: 96 VTHGGNEKLSERLVVRPTSETLFCDHYSKIIQSYNDLPKKYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E ++ M +Y ++ Sbjct: 153 LRTTEFLWQEGHTVHATAEEAEEETLLMLNTYAKM------------------------- 187 Query: 210 FIVLADTGETQVFCSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 ++F+ P+ + T+ + A Y S +H+ K Sbjct: 188 --------------CEEFLAIPVLKGQKTEKEKFAGAQ-------ATYTIESLMHDGKAL 226 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 S G FGT ++ + + K Y S+G+ R++ A+ Sbjct: 227 QS--------------GTSHNFGTGFAKAFDIKYSDKNSKMQYAHQTSWGV-TTRLIGAI 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQ 387 I D G++ P VAP ++ +I I AH + V ACE + RL+ V V D + Sbjct: 272 IMVHGDSSGLVLPPRVAPTQVMIIPIAAHKEGVIEKACE-LQTRLASVA-RVKCDTSDKT 329 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F+ ++ G P++V +G K + +++V + R T + +SL+++ Sbjct: 330 PGWKFSEYEMKGIPVRVEIGPKDIENNQVVLVRRDTREKIIVSLDDL 376 >gi|193065767|ref|ZP_03046830.1| threonyl-tRNA synthetase [Escherichia coli E22] gi|194428543|ref|ZP_03061082.1| threonyl-tRNA synthetase [Escherichia coli B171] gi|218554286|ref|YP_002387199.1| threonyl-tRNA synthetase [Escherichia coli IAI1] gi|260844071|ref|YP_003221849.1| threonyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|260855585|ref|YP_003229476.1| threonyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|260868246|ref|YP_003234648.1| threonyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|293446093|ref|ZP_06662515.1| threonyl-tRNA synthetase [Escherichia coli B088] gi|331668404|ref|ZP_08369252.1| threonine--tRNA ligase [Escherichia coli TA271] gi|331677592|ref|ZP_08378267.1| threonine--tRNA ligase [Escherichia coli H591] gi|226701402|sp|B7M1C7|SYT_ECO8A RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|192926539|gb|EDV81170.1| threonyl-tRNA synthetase [Escherichia coli E22] gi|194413421|gb|EDX29704.1| threonyl-tRNA synthetase [Escherichia coli B171] gi|195182909|dbj|BAG66479.1| threonyl-tRNA synthetase [Escherichia coli O111:H-] gi|218361054|emb|CAQ98632.2| threonyl-tRNA synthetase [Escherichia coli IAI1] gi|257754234|dbj|BAI25736.1| threonyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|257759218|dbj|BAI30715.1| threonyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|257764602|dbj|BAI36097.1| threonyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|291322923|gb|EFE62351.1| threonyl-tRNA synthetase [Escherichia coli B088] gi|323153043|gb|EFZ39312.1| threonyl-tRNA synthetase [Escherichia coli EPECa14] gi|331063598|gb|EGI35509.1| threonine--tRNA ligase [Escherichia coli TA271] gi|331074052|gb|EGI45372.1| threonine--tRNA ligase [Escherichia coli H591] Length = 642 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 625 >gi|300818358|ref|ZP_07098568.1| threonyl-tRNA synthetase [Escherichia coli MS 107-1] gi|300821407|ref|ZP_07101554.1| threonyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300525910|gb|EFK46979.1| threonyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300528998|gb|EFK50060.1| threonyl-tRNA synthetase [Escherichia coli MS 107-1] gi|323158484|gb|EFZ44500.1| threonyl-tRNA synthetase [Escherichia coli E128010] gi|323175213|gb|EFZ60827.1| threonyl-tRNA synthetase [Escherichia coli LT-68] gi|323180497|gb|EFZ66042.1| threonyl-tRNA synthetase [Escherichia coli 1180] gi|323186265|gb|EFZ71617.1| threonyl-tRNA synthetase [Escherichia coli 1357] Length = 622 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 412 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 605 >gi|82543879|ref|YP_407826.1| threonyl-tRNA synthetase [Shigella boydii Sb227] gi|187734126|ref|YP_001880509.1| threonyl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|123769450|sp|Q321L0|SYT_SHIBS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238689503|sp|B2U397|SYT_SHIB3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81245290|gb|ABB65998.1| threonine tRNA synthetase [Shigella boydii Sb227] gi|187431118|gb|ACD10392.1| threonyl-tRNA synthetase [Shigella boydii CDC 3083-94] Length = 642 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 625 >gi|124486203|ref|YP_001030819.1| prolyl-tRNA synthetase [Methanocorpusculum labreanum Z] gi|152112928|sp|A2ST96|SYP_METLZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|124363744|gb|ABN07552.1| prolyl-tRNA synthetase [Methanocorpusculum labreanum Z] Length = 477 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 83/157 (52%), Gaps = 6/157 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + + G +S + T++ +G+ +GI + R +AA+I D KG+ Sbjct: 222 GRTLQIGTVHHLGDHFSTTYNITYEDVNGEQKLASQTCFGI-SERCIAAIIAVHGDDKGL 280 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 + P +VAP ++ +I I K D++ A EK+ + L G V D + G+++ Sbjct: 281 VLPATVAPTQVVIIPIIVGKRGDEIMA-AVEKLESELKAAGLRVKTDARDMRPGAKYYHW 339 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +L G PL+V +G + + ++++ +RL G++ + E Sbjct: 340 ELHGVPLRVELGPRDLDNNQLVCANRL-GVKTTIPRE 375 Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust. Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 4/123 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+Y W P G ++ ++R NR + + + E+ + E+ + Sbjct: 35 KGLYVWYPFGFALRNHTYTLLRSLLNRDHEETLFPLLIPETEFMKEAEHIKGFEDEVYWV 94 Query: 97 ADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 D + PT E + ++ ++S+ +LP YQ+ FR E + ++R Sbjct: 95 THGGLSPLDVKLALRPTSETAIYPMYALWVRSHADLPLKLYQVVNTFRYETKHTRPLIRL 154 Query: 153 REF 155 RE Sbjct: 155 REI 157 >gi|320173198|gb|EFW48409.1| Threonyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112] gi|320185858|gb|EFW60609.1| Threonyl-tRNA synthetase [Shigella flexneri CDC 796-83] gi|332096305|gb|EGJ01306.1| threonyl-tRNA synthetase [Shigella boydii 3594-74] Length = 622 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 412 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 605 >gi|332884684|gb|EGK04941.1| prolyl-tRNA synthetase [Dysgonomonas mossii DSM 22836] Length = 493 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 83/157 (52%), Gaps = 5/157 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ F +GK YV S+G+ + R++ A+I + D G++ Sbjct: 237 KALQSGTSHFLGQNFAKAFDVKFADKEGKMDYVWATSWGV-STRLIGALIMAHSDDNGLV 295 Query: 340 WPDSVAPFKISLINI-KAHDQVC--RDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVA 395 P +APF++ ++ I K +Q+ + + I L +G V +D+ + G +F+ Sbjct: 296 LPPKLAPFQVVIVPIYKGAEQLALINEKVDGIVKSLKALGISVKYDNADNRKPGWKFSEY 355 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +L G P+++ +G++ + ++ VE+ R T +E +S + Sbjct: 356 ELKGVPVRLAMGARDMENNTVEVARRDTLTKETVSCD 392 Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +R+ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEELIVRPTSETIIWNTYRNWIQSYRDLPILVNQWANVVRWEMRTRL-FLRTAEFLWQEG 176 Query: 161 YS 162 ++ Sbjct: 177 HT 178 >gi|262374878|ref|ZP_06068112.1| threonyl-tRNA synthetase [Acinetobacter lwoffii SH145] gi|262309891|gb|EEY91020.1| threonyl-tRNA synthetase [Acinetobacter lwoffii SH145] Length = 640 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 84/400 (21%), Positives = 150/400 (37%), Gaps = 54/400 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G E+ P + LW +SG +Y Sbjct: 255 MQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYEEIRTPQVVDFTLWEKSGHAANYAD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSENRNYAV-KPMNCPCHVQVFNQGLKSYRDLPVRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGPEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L++ +W + K+ Sbjct: 431 ----KLWDMAE------KSLAD--------------ALDAAGLEWEL-QPGEGAFYGPKI 465 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP + A++ D +D V + +G+ Sbjct: 466 EFSLKDC---------LGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P +AP + ++NI +ACE + A+L + G Sbjct: 517 FERFIGILIEHYAG---FMPPWLAPMQACVMNITDSQA---EACESVVAKLKENGIRAIS 570 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + L P +++G + V + V ++ R Sbjct: 571 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTR 610 >gi|28199783|ref|NP_780097.1| threonyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182682533|ref|YP_001830693.1| threonyl-tRNA synthetase [Xylella fastidiosa M23] gi|32130161|sp|Q87AB2|SYT_XYLFT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238691115|sp|B2I9P8|SYT_XYLF2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|28057904|gb|AAO29746.1| threonyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182632643|gb|ACB93419.1| threonyl-tRNA synthetase [Xylella fastidiosa M23] gi|307578811|gb|ADN62780.1| threonyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 635 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 85/422 (20%), Positives = 156/422 (36%), Gaps = 48/422 (11%) Query: 16 RDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 +DAE H+ + + + + G+ W P G + IR +G E+ P Sbjct: 238 QDAEKRDHRKIGKAQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCP 297 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + LW +SG +D+Y KE + D + P + +F + SYR+LP + Sbjct: 298 QILDVSLWQKSGHWDNY-KENMFFTDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRY 356 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + R+E G++R R F D + F T + L+++ G + Sbjct: 357 GEFGACHRNEPSGALHGLLRVRGFTQDDGHIF-CTEAQIEAEVTAFHRQALQVYADFGFE 415 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 +I ++ P +G LS + A C ++ + P Sbjct: 416 NIQIKIALRPDKRLGDSLSWDKAEAALRAALSA-CEVEWQELPGEG-------------- 460 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y + H L D++ ++ ++ G +Y S + Sbjct: 461 -----AFYGPKIEYH---LKDAIGRTWQLGTIQVDFMMPARLGAEYVDERSQ-------R 505 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H V + +G+M ++ + G IWP +AP ++ + NI + E++ Sbjct: 506 RHPVMLHRAIVGSMERFIGILIEHYAG---IWPTWLAPVQVVIANIT---DAQYEYAEQV 559 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 + L G V D E+IG + L P ++VG + + V ++ T RED Sbjct: 560 HKALLNQGFRVNIDLRNEKIGYKIREHTLQRVPYLLVVGDREKENGTVAVR---TCSRED 616 Query: 429 MS 430 + Sbjct: 617 LG 618 >gi|319400998|gb|EFV89217.1| threonyl-tRNA synthetase [Staphylococcus epidermidis FRI909] Length = 645 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 91/407 (22%), Positives = 168/407 (41%), Gaps = 45/407 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML-RL 96 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M + Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAM 321 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D+AM+ P + I+++ SYR LP ++ R E G+ R R Sbjct: 322 KLDEDEAMVLRPMNCPHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIQDVYKDFGFEDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLN---SIVEQWTAPYAATSDVHNEKLFDSLP 272 + + D M S + D + L +I E A Y DV ++ ++ Sbjct: 427 PEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAIGE--AAFYGPKLDV---QVKTAMG 481 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIE 330 + + +S ++ F ++ L T+ G DG+ H + G+ + R VA + E Sbjct: 482 KEETLSTAQLD----FLLPERFDL----TYIGQDGEQHRPVVIHRGVVSTMERFVAFLTE 533 Query: 331 SSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + KG +P +AP ++ +I N+ H D + L G V DD E++ Sbjct: 534 ET---KG-AFPTWLAPMQVEIIPVNVDLH----YDYARLLQDELKSQGVRVEIDDRNEKM 585 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + A + P Q++VG K V + +V ++ + +E + +E I Sbjct: 586 GYKIREAQMKKIPYQIVVGDKEVENQEVNVRKYGSEKQESVEKDEFI 632 >gi|16129675|ref|NP_416234.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|24112885|ref|NP_707395.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 301] gi|26247970|ref|NP_754010.1| threonyl-tRNA synthetase [Escherichia coli CFT073] gi|30063014|ref|NP_837185.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|74311961|ref|YP_310380.1| threonyl-tRNA synthetase [Shigella sonnei Ss046] gi|89108559|ref|AP_002339.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110] gi|91210933|ref|YP_540919.1| threonyl-tRNA synthetase [Escherichia coli UTI89] gi|110641840|ref|YP_669570.1| threonyl-tRNA synthetase [Escherichia coli 536] gi|110805471|ref|YP_688991.1| threonyl-tRNA synthetase [Shigella flexneri 5 str. 8401] gi|117623893|ref|YP_852806.1| threonyl-tRNA synthetase [Escherichia coli APEC O1] gi|170081377|ref|YP_001730697.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|170680212|ref|YP_001743530.1| threonyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|188492265|ref|ZP_02999535.1| threonyl-tRNA synthetase [Escherichia coli 53638] gi|191171752|ref|ZP_03033299.1| threonyl-tRNA synthetase [Escherichia coli F11] gi|194435142|ref|ZP_03067376.1| threonyl-tRNA synthetase [Shigella dysenteriae 1012] gi|194438580|ref|ZP_03070669.1| threonyl-tRNA synthetase [Escherichia coli 101-1] gi|215486938|ref|YP_002329369.1| threonyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|218558588|ref|YP_002391501.1| threonyl-tRNA synthetase [Escherichia coli S88] gi|218689663|ref|YP_002397875.1| threonyl-tRNA synthetase [Escherichia coli ED1a] gi|218699714|ref|YP_002407343.1| threonyl-tRNA synthetase [Escherichia coli IAI39] gi|218705218|ref|YP_002412737.1| threonyl-tRNA synthetase [Escherichia coli UMN026] gi|237705668|ref|ZP_04536149.1| threonyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|238900934|ref|YP_002926730.1| threonyl-tRNA synthetase [Escherichia coli BW2952] gi|253773326|ref|YP_003036157.1| threonyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161779|ref|YP_003044887.1| threonyl-tRNA synthetase [Escherichia coli B str. REL606] gi|256022617|ref|ZP_05436482.1| threonyl-tRNA synthetase [Escherichia sp. 4_1_40B] gi|293405218|ref|ZP_06649210.1| threonyl-tRNA synthetase [Escherichia coli FVEC1412] gi|293410035|ref|ZP_06653611.1| threonyl-tRNA synthetase [Escherichia coli B354] gi|293415037|ref|ZP_06657680.1| threonyl-tRNA synthetase [Escherichia coli B185] gi|297517244|ref|ZP_06935630.1| threonyl-tRNA synthetase [Escherichia coli OP50] gi|298380861|ref|ZP_06990460.1| threonyl-tRNA synthetase [Escherichia coli FVEC1302] gi|300938947|ref|ZP_07153648.1| threonyl-tRNA synthetase [Escherichia coli MS 21-1] gi|300987614|ref|ZP_07178286.1| threonyl-tRNA synthetase [Escherichia coli MS 200-1] gi|300994418|ref|ZP_07180923.1| threonyl-tRNA synthetase [Escherichia coli MS 45-1] gi|301017728|ref|ZP_07182383.1| threonyl-tRNA synthetase [Escherichia coli MS 69-1] gi|301025270|ref|ZP_07188835.1| threonyl-tRNA synthetase [Escherichia coli MS 196-1] gi|306815028|ref|ZP_07449184.1| threonyl-tRNA synthetase [Escherichia coli NC101] gi|307138378|ref|ZP_07497734.1| threonyl-tRNA synthetase [Escherichia coli H736] gi|312966921|ref|ZP_07781139.1| threonyl-tRNA synthetase [Escherichia coli 2362-75] gi|331642316|ref|ZP_08343451.1| threonine--tRNA ligase [Escherichia coli H736] gi|331653119|ref|ZP_08354124.1| threonine--tRNA ligase [Escherichia coli M718] gi|67473036|sp|P0A8M3|SYT_ECOLI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|67473037|sp|P0A8M4|SYT_ECOL6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|67473038|sp|P0A8M5|SYT_SHIFL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122957455|sp|Q0T4S9|SYT_SHIF8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123084457|sp|Q1RB76|SYT_ECOUT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123343967|sp|Q0THB0|SYT_ECOL5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123732358|sp|Q3Z267|SYT_SHISS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223339|sp|A1ABQ2|SYT_ECOK1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701400|sp|B7MAS9|SYT_ECO45 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701401|sp|B7NT58|SYT_ECO7I RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701403|sp|B7N556|SYT_ECOLU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701404|sp|B1LE12|SYT_ECOSM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229557979|sp|B1XGI1|SYT_ECODH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783521|sp|B7USA2|SYT_ECO27 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783523|sp|B7MVJ7|SYT_ECO81 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|259516437|sp|C4ZYI1|SYT_ECOBW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|5107656|pdb|1QF6|A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed With Its Cognate Trna gi|26108373|gb|AAN80575.1|AE016761_150 Threonyl-tRNA synthetase [Escherichia coli CFT073] gi|1742811|dbj|BAA15498.1| threonyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110] gi|1788013|gb|AAC74789.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|24051829|gb|AAN43102.1| threonine tRNA synthetase [Shigella flexneri 2a str. 301] gi|30041263|gb|AAP16992.1| threonine tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|73855438|gb|AAZ88145.1| threonine tRNA synthetase [Shigella sonnei Ss046] gi|91072507|gb|ABE07388.1| threonyl-tRNA synthetase [Escherichia coli UTI89] gi|110343432|gb|ABG69669.1| threonyl-tRNA synthetase [Escherichia coli 536] gi|110615019|gb|ABF03686.1| threonine tRNA synthetase [Shigella flexneri 5 str. 8401] gi|115513017|gb|ABJ01092.1| threonine tRNA synthetase [Escherichia coli APEC O1] gi|169889212|gb|ACB02919.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|170517930|gb|ACB16108.1| threonyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|188487464|gb|EDU62567.1| threonyl-tRNA synthetase [Escherichia coli 53638] gi|190908082|gb|EDV67674.1| threonyl-tRNA synthetase [Escherichia coli F11] gi|194416606|gb|EDX32741.1| threonyl-tRNA synthetase [Shigella dysenteriae 1012] gi|194422590|gb|EDX38588.1| threonyl-tRNA synthetase [Escherichia coli 101-1] gi|215265010|emb|CAS09396.1| threonyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|218365357|emb|CAR03078.1| threonyl-tRNA synthetase [Escherichia coli S88] gi|218369700|emb|CAR17469.1| threonyl-tRNA synthetase [Escherichia coli IAI39] gi|218427227|emb|CAR08113.2| threonyl-tRNA synthetase [Escherichia coli ED1a] gi|218432315|emb|CAR13205.1| threonyl-tRNA synthetase [Escherichia coli UMN026] gi|222033474|emb|CAP76215.1| Threonyl-tRNA synthetase [Escherichia coli LF82] gi|226900425|gb|EEH86684.1| threonyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|238863657|gb|ACR65655.1| threonyl-tRNA synthetase [Escherichia coli BW2952] gi|242377442|emb|CAQ32194.1| threonyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|253324370|gb|ACT28972.1| threonyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973680|gb|ACT39351.1| threonyl-tRNA synthetase [Escherichia coli B str. REL606] gi|253977874|gb|ACT43544.1| threonyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|260449158|gb|ACX39580.1| threonyl-tRNA synthetase [Escherichia coli DH1] gi|281600917|gb|ADA73901.1| Threonyl-tRNA synthetase [Shigella flexneri 2002017] gi|284921639|emb|CBG34711.1| threonyl-tRNA synthetase [Escherichia coli 042] gi|291427426|gb|EFF00453.1| threonyl-tRNA synthetase [Escherichia coli FVEC1412] gi|291432685|gb|EFF05664.1| threonyl-tRNA synthetase [Escherichia coli B185] gi|291470503|gb|EFF12987.1| threonyl-tRNA synthetase [Escherichia coli B354] gi|294493274|gb|ADE92030.1| threonyl-tRNA synthetase [Escherichia coli IHE3034] gi|298278303|gb|EFI19817.1| threonyl-tRNA synthetase [Escherichia coli FVEC1302] gi|299880135|gb|EFI88346.1| threonyl-tRNA synthetase [Escherichia coli MS 196-1] gi|300306094|gb|EFJ60614.1| threonyl-tRNA synthetase [Escherichia coli MS 200-1] gi|300400020|gb|EFJ83558.1| threonyl-tRNA synthetase [Escherichia coli MS 69-1] gi|300406264|gb|EFJ89802.1| threonyl-tRNA synthetase [Escherichia coli MS 45-1] gi|300456146|gb|EFK19639.1| threonyl-tRNA synthetase [Escherichia coli MS 21-1] gi|305851676|gb|EFM52129.1| threonyl-tRNA synthetase [Escherichia coli NC101] gi|307553740|gb|ADN46515.1| threonine tRNA synthetase [Escherichia coli ABU 83972] gi|307626794|gb|ADN71098.1| threonyl-tRNA synthetase [Escherichia coli UM146] gi|309701942|emb|CBJ01255.1| threonyl-tRNA synthetase [Escherichia coli ETEC H10407] gi|312288385|gb|EFR16287.1| threonyl-tRNA synthetase [Escherichia coli 2362-75] gi|315136359|dbj|BAJ43518.1| threonyl-tRNA synthetase [Escherichia coli DH1] gi|315286432|gb|EFU45867.1| threonyl-tRNA synthetase [Escherichia coli MS 110-3] gi|315290480|gb|EFU49854.1| threonyl-tRNA synthetase [Escherichia coli MS 153-1] gi|320181253|gb|EFW56172.1| Threonyl-tRNA synthetase [Shigella boydii ATCC 9905] gi|320194570|gb|EFW69201.1| Threonyl-tRNA synthetase [Escherichia coli WV_060327] gi|323937321|gb|EGB33600.1| threonyl-tRNA synthetase [Escherichia coli E1520] gi|323940615|gb|EGB36806.1| threonyl-tRNA synthetase [Escherichia coli E482] gi|323952226|gb|EGB48099.1| threonyl-tRNA synthetase [Escherichia coli H252] gi|323956620|gb|EGB52358.1| threonyl-tRNA synthetase [Escherichia coli H263] gi|323962102|gb|EGB57698.1| threonyl-tRNA synthetase [Escherichia coli H489] gi|323973902|gb|EGB69074.1| threonyl-tRNA synthetase [Escherichia coli TA007] gi|323978098|gb|EGB73184.1| threonyl-tRNA synthetase [Escherichia coli TW10509] gi|324011501|gb|EGB80720.1| threonyl-tRNA synthetase [Escherichia coli MS 60-1] gi|331039114|gb|EGI11334.1| threonine--tRNA ligase [Escherichia coli H736] gi|331049217|gb|EGI21289.1| threonine--tRNA ligase [Escherichia coli M718] gi|332758628|gb|EGJ88947.1| threonyl-tRNA synthetase [Shigella flexneri 2747-71] gi|333003769|gb|EGK23305.1| threonyl-tRNA synthetase [Shigella flexneri VA-6] gi|333004377|gb|EGK23908.1| threonyl-tRNA synthetase [Shigella flexneri K-218] gi|333006570|gb|EGK26070.1| threonyl-tRNA synthetase [Shigella flexneri K-272] gi|333018789|gb|EGK38082.1| threonyl-tRNA synthetase [Shigella flexneri K-227] Length = 642 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 625 >gi|294084802|ref|YP_003551562.1| threonyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664377|gb|ADE39478.1| Threonyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 641 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 8/161 (4%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + M H + + G W G + + +R + Sbjct: 232 YLHMLEE----AEKRDHRKLGKQLDMFHLQEEAAGSVFWHQKGWFIYREIESYVRRRLEQ 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L LW ESG +D + + M +++ + P + IFR IK Sbjct: 288 AGYGEVKTPQLVDRTLWEESGHWDKFRENMFTAQSEDERTLALKPMNCPCHVQIFRQGIK 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP + R+E G+MR R F DA+ F Sbjct: 348 SYRDLPLRMAEFGSCHRNEPSGALHGIMRVRAFTQDDAHIF 388 >gi|72381873|ref|YP_291228.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] gi|123759915|sp|Q46LV3|SYT_PROMT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|72001723|gb|AAZ57525.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus marinus str. NATL2A] Length = 641 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 86/424 (20%), Positives = 165/424 (38%), Gaps = 45/424 (10%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL + + H + + G+ W P G + IRE + E+ P Sbjct: 237 EAEKRDHRKLGKKYSLFHSQEEAPGMVFWHPKGWTIYRILEDFIRETITKYDYQEVKSPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG +D + ++M N + I P + IF +KSYR+LP Sbjct: 297 VVDRSLWEKSGHWDKFKEDMFTTTSENREYAI-KPMNCPCHIQIFNQGLKSYRDLPIRLS 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F+ DA+ F T E + ++ G S Sbjct: 356 EFGSCHRNEPSGALHGLMRVRNFVQDDAHIF-CTDEQIQEEVQNFIDLVFEVYKTFGFDS 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 I ++ + P+ S + ++ ++ SK +P E + I + Sbjct: 415 ILIKLSTRPVKRVGSDDIWDKSEKALSEALDSKGLDWSLLPGEGAFYGPKIEFS------ 468 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDH 310 L D L N+ I+V +S+P ++A++ G+ Sbjct: 469 --------------LKDCL--NRVWQCGTIQV--------DFSMPQRLNASYIDITGRKQ 504 Query: 311 Y-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G+ ++ ++ G +P ++P +I ++ I + +AC Sbjct: 505 TPVMLHRAILGSFERFIGILIENYSGN---FPTWLSPIQIMIMGITDRNN---EACFTAK 558 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +L G D E++G + + P +I+G K +S++ ++ R +M Sbjct: 559 DKLVDFGFRAEIDIRNEKVGFKIREHTMQRIPFLIIIGDKEEENSEISVRTREGKDLGNM 618 Query: 430 SLEE 433 S+++ Sbjct: 619 SIDK 622 >gi|238883498|gb|EEQ47136.1| hypothetical protein CAWG_05697 [Candida albicans WO-1] Length = 691 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 74/346 (21%), Positives = 137/346 (39%), Gaps = 72/346 (20%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 287 DEHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEG 346 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ LT + + + ++ Y ++ L ++P +V E + Sbjct: 347 HTAHLTKDAAANEVLQILDYYAGVYEEL--LAVP----------------VVKGKKTENE 388 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F D+ + VE + A + R Sbjct: 389 KFAGGDY------------------TTTVEGFIA----------------------ATGR 408 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKG 337 GI+ G + GT +S + + + +G + + S+G+ + RV+ +I + D KG Sbjct: 409 GIQGGTSHHLGTNFSKMFNISVENPEGSEKPRIFAYQNSWGL-STRVIGVMIMTHSDNKG 467 Query: 338 IIWPDSVAPFKISLINI-------KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE--QI 388 ++ P +A ++ +I + A + + EKI L G V D E Sbjct: 468 LVLPPRIAQYQAVVIPVGLTSKSTDAQRKEINEGAEKIEQSLRANGIRVT-GDYREIYNP 526 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +FA +L G PL+ G K ++ ++V I R G + + L+E+ Sbjct: 527 GWKFADWELKGVPLRFEFGPKDLAGNQVTIVRRNDGKKYTVKLDEL 572 >gi|152988735|ref|YP_001347870.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PA7] gi|166225481|sp|A6V485|SYT_PSEA7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|150963893|gb|ABR85918.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PA7] Length = 640 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW SG + +Y + Sbjct: 255 LQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRILWERSGHWSNYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M A + + P + IF +KSYR+LP + R+E G+M Sbjct: 315 NMFTTASESRDYAV-KPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E K L+++ G I M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTRPAKRVGSD 430 >gi|225873756|ref|YP_002755215.1| threonine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] gi|259516262|sp|C1F9K5|SYT_ACIC5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225794268|gb|ACO34358.1| threonine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] Length = 681 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 90/421 (21%), Positives = 158/421 (37%), Gaps = 67/421 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +REE R G + P + LW SG Y + M Sbjct: 299 GLIFWHPKGAMIRKIMEDWMREECIRRGYDLVYTPHVMRVQLWKTSGHEGFYSQNMFTPM 358 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +D P + I++S +SYR+LP + ++ +R E G++R R F Sbjct: 359 ELDDAEYRLKPMNCPGHILIYKSQPRSYRDLPVRYAELGNVYRYERSGTMHGLLRVRGFT 418 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F TPE + E + D Sbjct: 419 QDDAHIF-CTPE------------------------------------QIEDEVVACIDF 441 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDI-----------ISLNSIVEQWTAPYAATSDVHNE 265 ++ V + FMDF + D +D ++++S+ T A + E Sbjct: 442 AQS-VLTTFGFMDFQVELSTWDPNDRKNYAGSDDKWNLAISSLESALTRKGIAYKTIAGE 500 Query: 266 KLFDSLPENKRVSARGIEV-GHIFYFGT-KYSLPMSATFK----GADGKDHYVQMGSYGI 319 F ++ + ++V G ++ T ++ + A F+ G DG+ H M + Sbjct: 501 AAF----YGPKIDIKLVDVLGRLWQLSTVQFDFNLPARFELEYVGEDGERHQPVMVHRAL 556 Query: 320 -GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G++ V+ + G +W +AP +I L+ I EK+ +L G Sbjct: 557 YGSVERFFGVLIEHYAGAFPLW---LAPVQIGLVPISERHLAY---AEKVQQQLEAAGFR 610 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V D E++ ++ L FP +I+G K V ++ R G + + L+E I A Sbjct: 611 VELDRRNEKMNAKIRDFTLQKFPYVLIMGDKEAEAGAVSVRTRGKGDQGSLPLDEFIGRA 670 Query: 439 S 439 + Sbjct: 671 T 671 >gi|332880161|ref|ZP_08447843.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681920|gb|EGJ54835.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 493 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 84/163 (51%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G + + F D K Y S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFGKAFNVQFINKDNKLEYAWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR---DACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I + + + + E I ARL +G V +D+ ++ G +FA Sbjct: 295 VLPPKLAPIQVVIVPIYKNAEQLKAIDEKVEGIVARLRALGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++++G + + ++ VE+ R T +E + + + +Y Sbjct: 355 YELKGVPVRLVMGGRDLENNTVEVMRRDTLEKETRTCDGIEDY 397 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q R E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWCNVMRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSY 181 ++ ++ T E ++ M Y Sbjct: 173 WQEGHTAHATREEAEERAKLMLKVY 197 >gi|329724705|gb|EGG61211.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU144] Length = 645 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 91/407 (22%), Positives = 168/407 (41%), Gaps = 45/407 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML-RL 96 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M + Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAM 321 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D+AM+ P + I+++ SYR LP ++ R E G+ R R Sbjct: 322 KLDEDEAMVLRPMNCPHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ ++ G K R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIQDVYKDFGFKDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLN---SIVEQWTAPYAATSDVHNEKLFDSLP 272 + + D M S + D + L +I E A Y DV ++ ++ Sbjct: 427 PEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAIGE--AAFYGPKLDV---QVKTAMG 481 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIE 330 + + +S ++ F ++ L T+ G DG+ H + G+ + R VA + E Sbjct: 482 KEETLSTAQLD----FLLPERFDL----TYIGQDGEQHRPVVIHRGVVSTMERFVAFLTE 533 Query: 331 SSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + KG +P +AP ++ +I N+ H D + L G V DD E++ Sbjct: 534 ET---KG-AFPTWLAPMQVEIIPVNVDLH----YDYARLLQDELKSQGVRVEIDDRNEKM 585 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + A + P Q++VG + V + +V ++ + +E + +E I Sbjct: 586 GYKIREAQMKKIPYQIVVGDQEVENQEVNVRKYGSEKQESVEKDEFI 632 >gi|242373974|ref|ZP_04819548.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis M23864:W1] gi|242348328|gb|EES39930.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis M23864:W1] Length = 654 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 84/403 (20%), Positives = 169/403 (41%), Gaps = 37/403 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 271 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPM 330 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ + M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 331 KLDETEEMVLRPMNCPHHMMIYNNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 390 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + D++ F + P+ K + ++ ++ G + R + P + + + Sbjct: 391 TLNDSHIF-VRPDQIKEEFKRVVNMIQEVYEDFGFEDYTFRLSYRDPEDKEKYMDDDEMW 449 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + E+ + + D M P + +I E A Y DV ++ ++ + Sbjct: 450 NKAESMLKEAVDEMGLPY------------VEAIGE--AAFYGPKLDV---QVKTAMGKE 492 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L T+ G+DG+ H + G+ + R VA + E + Sbjct: 493 ETLSTAQLD----FLLPERFEL----TYIGSDGEQHRPVVIHRGVVSTMERFVAFLTEET 544 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP ++ +I + + D ++ L G V DD E++G + Sbjct: 545 ---KG-AFPTWLAPKQVEIIPVNV--DIHYDYARQLQDELKSQGVRVEIDDRNEKMGYKI 598 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 599 REAQMQKIPYQIVVGDKEVENNEVNVRKYGSEDQESLEKDEFI 641 >gi|229003388|ref|ZP_04161210.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4] gi|228757863|gb|EEM07086.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4] Length = 257 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FGT +S F +GK YV S+G+ + R++ +I D G+ Sbjct: 4 GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGLIMVHSDNNGL 62 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P VAP ++ ++ I H + + ++ R+ KV V D + G +F ++ Sbjct: 63 VMPPKVAPVQVVIVPIAQHKEGVLEKATQLQGRIQKVA-RVKIDASNKTPGWKFNEYEMK 121 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+++ VG K + ++V + R T +E +S++++ Sbjct: 122 GVPIRLEVGPKDIEKNQVVLVRRDTKEKEFVSMDQL 157 >gi|228950947|ref|ZP_04113068.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228808674|gb|EEM55172.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 476 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 79/406 (19%), Positives = 157/406 (38%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ E+ TG + +P + + L E + + E+ Sbjct: 36 KGCMILRPYGYALWENMQKVMDEKLKGTGHENVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + D+ + PT E + + F ++SY +LP + Q +++ RP Sbjct: 96 VTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E S+ + Y Sbjct: 153 LRTTEFLWQEGHTIHETAEESQAETLNILNLYAS-------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 FC +D++ P I + T+ + A Y S +H+ Sbjct: 187 ------------FC-EDYLAIPVIKGQKTEKEKFAGAK-------ATYTIESLMHD---- 222 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + ++ G FGT +S F +GK YV S+G+ + R++ + Sbjct: 223 ----------GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGL 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P VAP ++ ++ I H + ++ + KV V D + Sbjct: 272 IMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQEHIQKVA-RVKIDASNKTP 330 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ VG K + ++V + R T +E + ++++ Sbjct: 331 GWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQL 376 >gi|153812523|ref|ZP_01965191.1| hypothetical protein RUMOBE_02922 [Ruminococcus obeum ATCC 29174] gi|149831448|gb|EDM86536.1| hypothetical protein RUMOBE_02922 [Ruminococcus obeum ATCC 29174] Length = 477 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 83/405 (20%), Positives = 153/405 (37%), Gaps = 70/405 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG + P G +N+ + TG + +P + + L E + + E+ Sbjct: 36 KGCMAIKPAGYAIWENIQHELDRRFKETGVQNVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + + + + PT E + D ++ I+S+R+LP + Q +++ RP Sbjct: 96 VTHGGLNELQERLCVRPTSETLFCDFYQKDIQSHRDLPKVYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +RSREFL ++ ++ T E ++ +M Y Sbjct: 153 LRSREFLWQEGHTAHATAEEAEERTIQMLNLY---------------------------- 184 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 AD FC + I + TD + A Y S +H+ K Sbjct: 185 ----AD------FCEEVLAIPVIKGQKTDKEKFAGA-------VATYTIESLMHDGKALQ 227 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 S G FG ++ + D YV S+G+ R++ A+I Sbjct: 228 S--------------GTSHNFGDGFAKAFGIQYTDKDNTLKYVHQTSWGM-TTRMIGAII 272 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 D G++ P +AP + +I I+ + + ++++A L G V DD G Sbjct: 273 MVHGDNSGLVLPPRIAPTQAVIIPIQQRKEGVLEKADELFAALKAAGIRVKVDDTDRSPG 332 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +FA ++ G P+++ G K + + + I R T + +S EE+ Sbjct: 333 FKFAEQEMRGIPVRIECGPKDIENGQAVICRRDTREKYVVSFEEL 377 >gi|268317819|ref|YP_003291538.1| prolyl-tRNA synthetase [Rhodothermus marinus DSM 4252] gi|262335353|gb|ACY49150.1| prolyl-tRNA synthetase [Rhodothermus marinus DSM 4252] Length = 496 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 70/336 (20%), Positives = 138/336 (41%), Gaps = 65/336 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ D F I+S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 114 EENLIVRPTSETIIWDAFSRWIQSWRDLPILINQWANVVRWEMRTRL-FLRTMEFLWQEG 172 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E + LRI D+ F Sbjct: 173 HTAHATRE-------EAIEEALRIL-------------------DIYTTF---------- 196 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 ++++M P+ I + + E+ +A D + ++L ++ R Sbjct: 197 ---AEEYMAMPV---------IQGVKTPSER----FAGAVDTY---CIEALMQDGR---- 233 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ F+ + + YV S+G+ + R++ A++ + D +G++ Sbjct: 234 ALQAGTSHFLGQNFAKAFDCKFQNQNNELEYVWATSWGV-STRLIGALVMTHSDDQGLVL 292 Query: 341 PDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVAD 396 P +AP ++ +I I +D + +I L G V D + G +F + Sbjct: 293 PPRLAPTQVVIIPIFRNDVEKSAVLEQAGRIERELKDAGFTVKLDARETHRPGWKFNEYE 352 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G P++V +G + V VE+ R T +E + E Sbjct: 353 VQGVPVRVAIGPRDVEQGTVELARRDTRTKETVPQE 388 >gi|262369846|ref|ZP_06063173.1| threonyl-tRNA synthetase [Acinetobacter johnsonii SH046] gi|262314885|gb|EEY95925.1| threonyl-tRNA synthetase [Acinetobacter johnsonii SH046] Length = 640 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 85/415 (20%), Positives = 156/415 (37%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW +SG +Y Sbjct: 255 MQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIRTPQVVDFTLWEKSGHAANYAD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + I P + +F +KSYR+LP + R+E G+M Sbjct: 315 GMFTTHSESRNYAI-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGQEVADFIQLTLDVYKDFGFEDVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L++ +W + K+ Sbjct: 431 ----ALWDMAE------KSLAD--------------ALDAAGLEWEL-QPGEGAFYGPKI 465 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP + A++ D +D V + +G+ Sbjct: 466 EFSLKDC---------LGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P + P + ++NI +ACE + A+L + G Sbjct: 517 FERFIGILIEHYAG---FMPPWLTPIQACVMNITDSQA---EACESVVAKLKENGLRAIS 570 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P +++G + V + V ++ R MS++ ++ Sbjct: 571 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGTNLGTMSIDAFVD 625 >gi|115359784|ref|YP_776922.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ambifaria AMMD] gi|115285072|gb|ABI90588.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ambifaria AMMD] Length = 402 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 93/418 (22%), Positives = 156/418 (37%), Gaps = 55/418 (13%) Query: 31 MIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDS 88 + HQ S G W P G V IR + E+ P + S DLW +SG ++ Sbjct: 15 LFHQQDESPGAIFWHPRGMVLYRVVEEYIRVRMRQAAFAEVRTPQIVSRDLWEQSGHWEK 74 Query: 89 YGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 +G+ M L N+ + P IF+ +SYR+LP + + R E Sbjct: 75 FGRNMFSLESDNNPYCL-KPMSCPCHVQIFKKGSRSYRDLPIRYSEFGAVHRAEPSGALH 133 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPI--GGD 205 G+MR+R F DA+ P+ + + V I+ G + + P GD Sbjct: 134 GLMRARAFTQDDAHVL-CMPDQVEIEVARFCVLLKTIYADFGFGEFDVALSTRPAVRAGD 192 Query: 206 LSHEFIVLADTGETQVFCSKDF--MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 + + D E + + +DF I + F Y + H Sbjct: 193 DA-----VWDRSEAMLASAARAAGLDFAIQAGEGAF----------------YGPKLEFH 231 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 LFD R + G I + LP + A + DG K V + +G Sbjct: 232 ---LFDR-------QGRKWQCGTI---QLDFVLPERLGAAYVAEDGAKATPVMLHHAVLG 278 Query: 321 AMRVVAAVIESSHDGKGIIW-PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 ++ ++ ++G W P +AP +I + NI D+ D + +GC V Sbjct: 279 SLERFIGILLEHYEG----WLPTWLAPDQIVVANIGKDDRAFADNTAFAF---EDIGCRV 331 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D E++ + A L P+ I G K +V ++ R G + +++ + + Y Sbjct: 332 LRDFRAERLPRKIFDARELAAPIVAIAGRKEALAGEVSLRLR-DGEQHVLTINDALAY 388 >gi|330995811|ref|ZP_08319708.1| proline--tRNA ligase [Paraprevotella xylaniphila YIT 11841] gi|329574541|gb|EGG56106.1| proline--tRNA ligase [Paraprevotella xylaniphila YIT 11841] Length = 493 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 84/163 (51%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G + + F D K Y S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFGKAFNVQFINKDNKLEYAWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR---DACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I + + + + E I ARL +G V +D+ ++ G +FA Sbjct: 295 VLPPKLAPIQVVIVPIYKNAEQLKAIDEKVEGIVARLRALGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++++G + + ++ VE+ R T +E + + + +Y Sbjct: 355 YELKGVPVRLVMGGRDLENNTVEVMRRDTLEKETRTCDGIEDY 397 Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q R E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWCNVMRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSY 181 ++ ++ T E ++ +M Y Sbjct: 173 WQEGHTAHATREEAEERAKQMLKVY 197 >gi|126695961|ref|YP_001090847.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] gi|166225476|sp|A3PBX1|SYT_PROM0 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|126543004|gb|ABO17246.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] Length = 638 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 82/382 (21%), Positives = 144/382 (37%), Gaps = 42/382 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + S G+ W P G + IRE + +E+ P LW +SG ++ + Sbjct: 255 IQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSLWEKSGHWEKFRD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +M A N I P + +F +KSY++LP + R+E G+M Sbjct: 315 DMFTTASENRTYAI-KPMNCPCHIQVFNQGLKSYKDLPIRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + + ++ G I ++ + P S + Sbjct: 374 RVRNFTQDDAHIF-CTEEQIQEEVSTFIDLVFEVYKTFGFDEIIIKLSTRPEKRVGSEDI 432 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ T+ +K+ P E + I + L D Sbjct: 433 WDKSEEALTKALDNKNLKWELQPGEGAFYGPKIEFS--------------------LKDC 472 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 L +R + G I +S+P + AT+ D K + V + +G+ Sbjct: 473 L-------SRVWQCGTI---QVDFSMPIRLDATYVDIDNEKRNPVMLHRAILGSFERFIG 522 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ ++ K IW +AP++I L++I + + C K ++ G D E+ Sbjct: 523 ILIEQYEAKFPIW---LAPYQIILLSITDRNI---EKCLKFNELINNNGYRSKVDIRNEK 576 Query: 388 IGSQFAVADLLGFPLQVIVGSK 409 IG + A L PL ++G K Sbjct: 577 IGYKIREATLGRVPLIAVIGDK 598 >gi|241957631|ref|XP_002421535.1| proline--trna ligase, putative; prolyl-tRNA synthetase, putative [Candida dubliniensis CD36] gi|223644879|emb|CAX40877.1| proline--trna ligase, putative [Candida dubliniensis CD36] Length = 688 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 74/346 (21%), Positives = 136/346 (39%), Gaps = 72/346 (20%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 284 DEHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEG 343 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ LT + + ++ Y ++ L ++P +V E + Sbjct: 344 HTAHLTKDAAAEEVLQILDYYAGVYEEL--LAVP----------------VVKGKKTENE 385 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F D+ + VE + A + R Sbjct: 386 KFAGGDY------------------TTTVEGFVA----------------------ATGR 405 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKG 337 GI+ G + GT +S + + + +G + + S+G+ + RV+ +I + D KG Sbjct: 406 GIQGGTSHHLGTNFSKMFNISVENPEGSEKPRIFAYQNSWGL-STRVIGVMIMTHSDNKG 464 Query: 338 IIWPDSVAPFKISLINI-------KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE--QI 388 ++ P +A ++ +I + A + + EKI L G V D E Sbjct: 465 LVLPPRIAQYQAVVIPVGLTSKSTDAQRKEINEGAEKIEQSLRANGIRVT-GDYREIYNP 523 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +FA +L G PL+ G K ++ ++V I R G + + L+E+ Sbjct: 524 GWKFADWELKGVPLRFEFGPKDLAGNQVTIVRRNDGKKYTVKLDEL 569 >gi|195937403|ref|ZP_03082785.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024] gi|261227789|ref|ZP_05942070.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000] gi|261258046|ref|ZP_05950579.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966] gi|320641567|gb|EFX10955.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101] gi|320646926|gb|EFX15759.1| threonyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89] gi|320668281|gb|EFX35108.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61] Length = 622 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 88/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 412 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V K+ ++ R M + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSMDVNEVI 605 >gi|150005824|ref|YP_001300568.1| prolyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|254881996|ref|ZP_05254706.1| prolyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294776476|ref|ZP_06741951.1| proline--tRNA ligase [Bacteroides vulgatus PC510] gi|319640997|ref|ZP_07995704.1| prolyl-tRNA synthetase [Bacteroides sp. 3_1_40A] gi|166980101|sp|A6L5I2|SYP_BACV8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|149934248|gb|ABR40946.1| prolyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|254834789|gb|EET15098.1| prolyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294449673|gb|EFG18198.1| proline--tRNA ligase [Bacteroides vulgatus PC510] gi|317387375|gb|EFV68247.1| prolyl-tRNA synthetase [Bacteroides sp. 3_1_40A] Length = 496 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 87/166 (52%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ + F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D++ + DA E I +L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEMLKKIDAKVEGIVNKLKAMGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +E+ R T +E S + + Y Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETRSCDGIEEYVQQ 400 Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ +++ I SYR+LP Q R E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWSTYKNWINSYRDLPILCNQWANVMRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSY 181 ++ ++ T E ++ KM Y Sbjct: 173 WQEGHTAHATREEAEAEAQKMLHVY 197 >gi|53712976|ref|YP_098968.1| threonyl-tRNA synthetase [Bacteroides fragilis YCH46] gi|60681188|ref|YP_211332.1| threonyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|253563046|ref|ZP_04840503.1| threonyl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|265763073|ref|ZP_06091641.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|73919767|sp|Q5LEQ6|SYT_BACFN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73919768|sp|Q64VP2|SYT_BACFR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|52215841|dbj|BAD48434.1| threonyl-tRNA synthetase [Bacteroides fragilis YCH46] gi|60492622|emb|CAH07394.1| putative threonyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|251946822|gb|EES87104.1| threonyl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|263255681|gb|EEZ27027.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|301162677|emb|CBW22224.1| putative threonyl-tRNA synthetase [Bacteroides fragilis 638R] Length = 646 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 95/421 (22%), Positives = 156/421 (37%), Gaps = 73/421 (17%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRLRLQDFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + +I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K +LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPDQVKG-------EFLRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S DF +F D ++ + E W A + EK Sbjct: 410 --------VFRSMDFDNF---EAQISLRDKVNREKYIGSDENWEKAEQAIIEACEEKGLK 458 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + G+D + H V + Sbjct: 459 AKIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIH 518 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W P+ V IS + + EK+ L Sbjct: 519 RAPFGSMERFVAVLIEHTA-GKFPLWLTPEQVVILPIS--------EKFNEYAEKVKTYL 569 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 DD E+IG + ++ P +IVG K + +V ++ + G + M E Sbjct: 570 KMKEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFE 629 Query: 433 E 433 E Sbjct: 630 E 630 >gi|289674656|ref|ZP_06495546.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5] Length = 87 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 2/86 (2%) Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI- 388 E + D GIIW D++APF+I+L+ ++ R+A +K+YA L+ G +V DD ++ Sbjct: 1 EKNSDENGIIWNDTLAPFQIALVPLRYETDAVREATDKLYADLTAAGFEVLLDDRDKKTS 60 Query: 389 -GSQFAVADLLGFPLQVIVGSKFVSD 413 G +FA +L+G P +++V + +++ Sbjct: 61 PGIKFADMELIGIPHRIVVSDRGLAE 86 >gi|212693169|ref|ZP_03301297.1| hypothetical protein BACDOR_02676 [Bacteroides dorei DSM 17855] gi|237709909|ref|ZP_04540390.1| prolyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] gi|237725421|ref|ZP_04555902.1| prolyl-tRNA synthetase [Bacteroides sp. D4] gi|265753562|ref|ZP_06088917.1| prolyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] gi|212664274|gb|EEB24846.1| hypothetical protein BACDOR_02676 [Bacteroides dorei DSM 17855] gi|229436108|gb|EEO46185.1| prolyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4] gi|229456002|gb|EEO61723.1| prolyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] gi|263235276|gb|EEZ20800.1| prolyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] Length = 496 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 87/166 (52%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ + F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D++ + DA E I +L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEMLKKIDAKVEGIVNKLKAMGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +E+ R T +E S + + Y Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETRSCDGIEEYVQQ 400 Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ +++ I SYR+LP Q R E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWSTYKNWINSYRDLPILCNQWANVMRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSY 181 ++ ++ T E ++ KM Y Sbjct: 173 WQEGHTAHATREEAEAEAQKMLHVY 197 >gi|119872334|ref|YP_930341.1| prolyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] gi|152112945|sp|A1RSR6|SYP_PYRIL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119673742|gb|ABL87998.1| prolyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] Length = 488 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 4/158 (2%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG Y W P G K NV +IR + TG E+ P + + ES + KE+ Sbjct: 40 KGAYVWRPYGMKLRRNVENLIRRIHDETGHEEVLFPVFIPYEFFSKESQHIRGFEKEVFW 99 Query: 96 LADRND--KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 ++ + + +I PT E + + + I+ Y++LP YQI FR E + ++R R Sbjct: 100 VSKGGEGGERLILRPTSETAIMPMVKLWIQDYKDLPLRLYQIVSVFRAETKMTHPMIRLR 159 Query: 154 EFLM-KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 E M K+A++ T E ++ + Y RIF + L Sbjct: 160 EISMFKEAHTVHATREDAERQIREAVEIYKRIFDEMCL 197 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 5/169 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + Y G ++ T+ DG SYGI + A +I DG G Sbjct: 226 GRTLQIGTVHYLGVNFTKVFEVTYLDIDGTRKLAHTTSYGISERSIAAMLITHGDDG-GT 284 Query: 339 IWPDSVAPFKISLINIKAHDQ---VCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAV 394 P +AP ++ ++ I ++ +++Y L VG + DD ++ G +F Sbjct: 285 TLPPKLAPIQVVIVPIFYGEEEMPTVMKFVDEVYRMLRDVGIRIHIDDRRDKTPGWKFYY 344 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +L G PL++ VG + + +V + R T + +SL E+++ S Sbjct: 345 WELKGVPLRIEVGRRDIEKRQVVVTRRDTLEKYAVSLGELVDAVKQLMS 393 >gi|307244722|ref|ZP_07526824.1| proline--tRNA ligase [Peptostreptococcus stomatis DSM 17678] gi|306491899|gb|EFM63950.1| proline--tRNA ligase [Peptostreptococcus stomatis DSM 17678] Length = 481 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 76/365 (20%), Positives = 142/365 (38%), Gaps = 81/365 (22%) Query: 80 WVESGRYDSYGKEML--RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ- 136 WV G G ++L RLA R PT E ++ ++ + SYR LPF + Q Sbjct: 98 WVTQG-----GNKVLEERLAVR--------PTSETIICTMYAKWLNSYRQLPFLYNQWNS 144 Query: 137 -LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 +++ RP +R+ EFL ++ ++ T + + + +Y ++ Sbjct: 145 VVRWEKSTRP---FLRTSEFLWQEGHTIHETEQEAIDETLQQLATYKKV----------- 190 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 ++D M P+ I S E+ Sbjct: 191 ----------------------------AEDLMAIPV---------IDGKKSESEK---- 209 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +A SD + E + ++ G + G ++ TF DG + Sbjct: 210 FAGASDTYT-------IEAMMHDGKALQSGTSHFLGQHFTKAFDITFSDRDGNLAHPYHT 262 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 S+GI + R++ +I D +G++ P +AP ++ +I I A+ + +K+ A L Sbjct: 263 SWGI-STRLIGGLIMVHSDNRGLVLPPKMAPTQVIIIPIAANKGGVMEVVDKVAADLKAK 321 Query: 376 GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD G +F A++ G P+++ +G K + ++ R + +MSL+ V Sbjct: 322 GITVEVDDRSNYSPGYKFNDAEMKGIPVRLEIGPKDIEKNQALAFRRDELTKSEMSLDTV 381 Query: 435 INYAS 439 + S Sbjct: 382 ADQVS 386 >gi|123968188|ref|YP_001009046.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] gi|166225480|sp|A2BQ78|SYT_PROMS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123198298|gb|ABM69939.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] Length = 638 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 83/382 (21%), Positives = 144/382 (37%), Gaps = 42/382 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + S G+ W P G + IRE + +E+ P LW +SG ++ + Sbjct: 255 IQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSLWEKSGHWEKFRD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +M A N I P + IF +KSY++LP + R+E G+M Sbjct: 315 DMFTTASENRTYAI-KPMNCPCHIQIFNQGLKSYKDLPIRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + + ++ G I ++ + P S + Sbjct: 374 RVRNFTQDDAHIF-CTEEQIQEEVSTFIDLVFEVYKTFGFDEIIIKLSTRPEKRVGSEDI 432 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ T+ +K+ P E + I + L D Sbjct: 433 WDKSEEALTKALDNKNLKWELQPGEGAFYGPKIEFS--------------------LKDC 472 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 L N+ I+V +S+P + AT+ D K + V + +G+ Sbjct: 473 L--NRVWQCGTIQVD--------FSMPIRLDATYVDIDNEKRNPVMLHRAILGSFERFIG 522 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ ++ K IW +AP++I L++I + + C K ++ G D E+ Sbjct: 523 ILIEQYEAKFPIW---LAPYQIILLSITDRNI---EKCLKFNELINNNGYRSKVDIRNEK 576 Query: 388 IGSQFAVADLLGFPLQVIVGSK 409 IG + A L PL ++G K Sbjct: 577 IGYKIREATLGRVPLIAVIGDK 598 >gi|261749214|ref|YP_003256899.1| prolyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497306|gb|ACX83756.1| prolyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 490 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 77/341 (22%), Positives = 136/341 (39%), Gaps = 71/341 (20%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 ++ PT E ++ FR I SYR+LP Q R E MR+R FL + Sbjct: 117 LVIRPTSESIIWKTFRHWIHSYRDLPLLLNQWGNAIRWE-------MRTRLFLRTSEF-- 167 Query: 164 DLTPEG-SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 L EG + HS K ++I + I D S + + + V Sbjct: 168 -LWQEGHTAHSTEK--------------EAIEETKKILNIYTDFSEKIMAIP-----VVQ 207 Query: 223 CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 K +MD SE T SL ++++ + + Sbjct: 208 GMKPYMDKFSGSETT-----FSLEAMMQ---------------------------DGKAL 235 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 ++G + G +S F +GK YV S+G+ + R++ ++ D G+I P Sbjct: 236 QIGTSHFLGQNFSKAFDVKFTNKNGKKEYVWSTSWGV-STRLIGGIVMLHSDDHGLILPP 294 Query: 343 SVAPFKISLINIKAHDQ---VCRDACEKIYARLSKVGCDVFWDDMGEQI---GSQFAVAD 396 +AP +I +I I + Q + E+I + + G V +D+ +I G +F + Sbjct: 295 KIAPIQIVIIPIYKNKQELSKINEIAERIQKIIKEKGFSVKYDN--REIFTPGWKFHEYE 352 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 + G P+++ +G + K E+ R T + D+S ++I + Sbjct: 353 MKGIPIRINIGLDEIIKEKAEVFRRDTYEKVDVSWNQIITF 393 >gi|313887217|ref|ZP_07820913.1| threonine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] gi|312923446|gb|EFR34259.1| threonine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] Length = 650 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 96/419 (22%), Positives = 170/419 (40%), Gaps = 62/419 (14%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + + ++ Q R G ++ P + + +L+ SG Y YG + ++ Sbjct: 264 QGLPLWLPRGTQLRLKLEDFLKRIQKRYGYQQVMTPHIGNVELYKTSGHYAKYGADSFQV 323 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + +A + P + +I+R SYR+LP + +R E G+ R R Sbjct: 324 ITTPQEGEAFMLKPMNCPHHCEIYRLKPHSYRDLPVRLAEFGTVYRYEQSGELHGLTRVR 383 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS----IPMRAE---SGPIGGDL 206 F DA+ F P+ K + K+ IF L ++ I +R++ S IG + Sbjct: 384 GFTQDDAHIF-CRPDQVKEEFLKVMDIIFIIFRALDFENFEAQISLRSQTDRSKYIGSEE 442 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + D E + + P + ++D+ A Y D Sbjct: 443 NW------DRAEQAIIEACQEAGLPA---HVEYDE-----------AAFYGPKLDF---M 479 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAM- 322 + D+L R ++G I Y+LP + G D + H V + G+M Sbjct: 480 VKDAL-------GRRWQLGTI---QVDYNLPERFDLEYTGEDNQKHRPVMIHRAPFGSME 529 Query: 323 RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 R VA +IE + GK +W PD V +S + + ++ A LS+ V Sbjct: 530 RFVAVLIEHTA-GKFPLWLAPDQVVILPVS--------ERFNEYANEVAAALSEHDISVS 580 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD E++G + +L P +IVG + +D V ++ + G D+ E++ +A Sbjct: 581 IDDRNEKVGRKIRDNELKRIPYMLIVGEQEQADGTVSVRKQGEG---DVGTEKISTFAE 636 >gi|119945879|ref|YP_943559.1| threonyl-tRNA synthetase [Psychromonas ingrahamii 37] gi|166225485|sp|A1SWU5|SYT_PSYIN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119864483|gb|ABM03960.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Psychromonas ingrahamii 37] Length = 635 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 81/397 (20%), Positives = 145/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +RE+ E+ P + LW +SG + Y Sbjct: 255 MQEEAPGMVFWHSNGWTIYRELEKYVREQTEAYDYQEVKAPQILDRALWEKSGHWGKYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N I P + IF +KSYR+LP + R+E G+M Sbjct: 315 NMFCTSSENRDYAI-KPMNCPGHLQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + + G I ++ + P +G D + Sbjct: 374 RVRAFTQDDAHIF-CTEEQILDEVSACIQMVFECYKTFGFDDIAVKLSTRPDQRVGDDAT 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ + + +P E + I L Sbjct: 433 WD---KAEAALANALTTNNINYGVLPGEGAFYGPKIEFT--------------------L 469 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L RG + G I +S+P + A+F G D + H M I G++ Sbjct: 470 YDCL-------GRGWQCGTI---QLDFSMPGRLDASFVGEDNERHTPVMIHRAILGSLER 519 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G ++P ++P ++ ++NI D ++ +L K G D Sbjct: 520 FIGILTEEYAG---VYPTWLSPKQVVVMNITDKQSAFVD---EVVNKLKKSGIRAISDLR 573 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P +++G + V +V ++ R Sbjct: 574 NEKIGFKIREHTLKRVPYLLVIGDQEVEAGEVAVRTR 610 >gi|226954309|ref|ZP_03824773.1| threonyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] gi|226834935|gb|EEH67318.1| threonyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] Length = 640 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 86/415 (20%), Positives = 155/415 (37%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q G E+ P + LW +SG +Y + Sbjct: 255 MQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSESRNYAV-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGQEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L+ W + K+ Sbjct: 431 ----ALWDIAE------KSLAD--------------ALDDAGLAWDL-QPGEGAFYGPKI 465 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP + A++ D +D V + +G+ Sbjct: 466 EFSLKDC---------LGRVWQCGTIQCDFNLPIRLDASYVTEDNERDQPVMLHRAILGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P +AP + ++NI DACE++ A+L + G Sbjct: 517 FERFIGILIEHYAG---FMPPWLAPIQACVMNITDSQA---DACEQVVAKLKESGLRAIS 570 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P +++G + V + V ++ R MS++ I+ Sbjct: 571 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSIDAFID 625 >gi|119485182|ref|ZP_01619567.1| threonyl-tRNA synthetase [Lyngbya sp. PCC 8106] gi|119457410|gb|EAW38535.1| threonyl-tRNA synthetase [Lyngbya sp. PCC 8106] Length = 608 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 82/417 (19%), Positives = 168/417 (40%), Gaps = 44/417 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +++EQ + G + + P + DL+ SG + Y ++M + Sbjct: 222 GLPLWTPKGTVLRSTLEDFLKKEQLKRGYLPVVTPHIGRIDLFKASGHWQQYREDMFPMM 281 Query: 98 DRNDKA------MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +++A + P + I++S ++SYR LP + +R E G+ Sbjct: 282 AEDEEAAKLEQGFVLKPMNCPFHIQIYKSELRSYRELPIRLAEFGTVYRYEQSGELGGLT 341 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F + D++ F +TPE + + + L +F +L L + R S ++ Sbjct: 342 RVRGFTVDDSHLF-VTPEQLESEFLNVVDLILSVFGKLKLSNFKARLS---FRDPESDKY 397 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 I G QV+ +K E + D + + A Y D + + D Sbjct: 398 I-----GSDQVW-NKAESAITKAVETLEMDHFLGIGE-----AAFYGPKLDFIFQDVLD- 445 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 R ++G + Y+LP + DG + V + G++ + Sbjct: 446 ---------REWQLGTV---QVDYNLPERFDLEYVAEDGTRQRPVMIHRAPFGSLERLIG 493 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G +W +AP ++ L+ + D+ +++ ++ + D E+ Sbjct: 494 ILIEQYAGDFPLW---LAPIQVRLLAVS--DEFL-TYTQEVVEKMRSLDIRAEVDRSRER 547 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G Q A+ P+ I+G+K V + + I+ R +G + ++EV + +N Sbjct: 548 LGKQIRNAEKEKIPVMAIIGAKEVEANSLSIRTRASGELGTLPVDEVCQRIQNAIAN 604 >gi|332292754|ref|YP_004431363.1| threonyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5] gi|332170840|gb|AEE20095.1| threonyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5] Length = 648 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 86/424 (20%), Positives = 167/424 (39%), Gaps = 45/424 (10%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +++E RD +L L T + +G+ WLP G + + ++ Q + Sbjct: 229 KEYLELIEEAKKRDHRKLGKELELFT-FSQRVGQGLPLWLPKGAALRERLENFLKAAQKK 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSH 121 G + P + +L+ SG Y+ YG + + L + + P + +I+ S Sbjct: 288 QGYEMVVSPHIGQKELYETSGHYEKYGADSFQPILTPNEGEEFLLKPMNCPHHCEIYNSR 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY+ LP F + +R E G+ R R F DA+ F TP+ + K+ Sbjct: 348 PWSYKELPKRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CTPDQLDEEFMKVIDL 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 L +F LG ++ + + L D + + + D + + +EN + Sbjct: 407 VLYVFGSLGFENFTAQ--------------VSLRDPEKPEKYIGAD--ENWVKAENAILN 450 Query: 241 DIIS--LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP- 297 + LN +VE A + D + K R ++G I Y+LP Sbjct: 451 AAKAKGLNYVVETGEAAFYGPK-------LDFMV--KDALGRSWQLGTI---QVDYNLPE 498 Query: 298 -MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 +KG+D + H V + G+M A++ G +W + P + +++ + Sbjct: 499 RFELQYKGSDNEMHRPVMIHRAPFGSMERFIAILLEHTGGNFPLW---LMPQQATILTL- 554 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + + + L D+ GE +G + A++ P +I+G + +D Sbjct: 555 --SEKYEKYAQNVLTLLENHEIRAIIDNRGETMGKKIREAEMQKLPFMIIIGEQEENDGT 612 Query: 416 VEIK 419 + ++ Sbjct: 613 ISVR 616 >gi|242242946|ref|ZP_04797391.1| threonyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|242233547|gb|EES35859.1| threonyl-tRNA synthetase [Staphylococcus epidermidis W23144] Length = 645 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 91/407 (22%), Positives = 168/407 (41%), Gaps = 45/407 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML-RL 96 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M + Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAM 321 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D+AM+ P + I+++ SYR LP ++ R E G+ R R Sbjct: 322 KLDEDEAMVLRPMNCPHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIQDVYKDFGFEDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLN---SIVEQWTAPYAATSDVHNEKLFDSLP 272 + + D M S + D + L +I E A Y DV ++ ++ Sbjct: 427 PEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAIGE--AAFYGPKLDV---QVKTAMG 481 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIE 330 + + +S ++ F ++ L T+ G DG+ H + G+ + R VA + E Sbjct: 482 KEETLSTAQLD----FLLPERFDL----TYIGQDGEQHRPVVIHRGVVSTMERFVAFLTE 533 Query: 331 SSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + KG +P +AP ++ +I N+ H D + L G V DD E++ Sbjct: 534 ET---KG-AFPTWLAPMQVEIIPVNVDLH----YDYARLLQDELKSQGVRVEIDDRNEKM 585 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + A + P Q++VG K V + +V ++ + +E + +E I Sbjct: 586 GYKIREAQMKKIPYQIVVGDKEVENQEVNVRKYGSEKQESVEKDEFI 632 >gi|241668765|ref|ZP_04756343.1| threonyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877296|ref|ZP_05250006.1| threonine-tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843317|gb|EET21731.1| threonine-tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 635 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 78/382 (20%), Positives = 142/382 (37%), Gaps = 48/382 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S GI W G + V +R + G E+ P + LW +SG Y + Sbjct: 256 QEDSPGIAFWHDSGVRIWREVEDYMRASNKKYGCGEIRTPLIADFSLWEKSGHASKYAEN 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N I P + ++ + + SYR+LP + + R+E G+MR Sbjct: 316 MFATKSENRDFAIR-PMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLMR 374 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F PE + M ++ G ++ P IG D + Sbjct: 375 VRSFTQDDGHIF-CAPEQVEEEVILMVKQCFEVYKDFGFNDFTVKIALRPENRIGNDETW 433 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + S+ + + + N ++ ++ A Y + H L Sbjct: 434 DK-------------SEQMLKNALDANNVAYE-------LLPGEGAFYGPKIEFH---LK 470 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 D++ R + G I +S+P + AT+ +G V + +G++ Sbjct: 471 DAI-------GRSWQCGTI---QLDFSMPDRLGATYIDKNGNKQVPVMLHRAIVGSLERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W + P +++++ I H + C+K++ L K G D Sbjct: 521 IGMLIEHYAGNMPLW---LTPVQVAVMGISNHQD---EYCQKVFETLEKNGIRAKLDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVG 407 E+IG + LL P VI+G Sbjct: 575 EKIGFKIREHTLLRVPYLVILG 596 >gi|312886253|ref|ZP_07745867.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] gi|311301278|gb|EFQ78333.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] Length = 641 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 87/405 (21%), Positives = 158/405 (39%), Gaps = 45/405 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-- 95 G+ WLP G + + +++ Q + G ++ P + +L+V SG Y+ YG + + Sbjct: 262 GLPLWLPKGTALRERLVNFLQKAQVKAGYEQVITPHIGHKNLYVTSGHYEKYGADSFQPI 321 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + P + +I+++ +SY++LP F + +R E G+ R R Sbjct: 322 KTPQEGEEFFLKPMNCPHHCEIYKTKPRSYKDLPVRFAEFGTVYRYEQSGELHGLTRVRG 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F P+ K + K+ L +F+ LG K + + L Sbjct: 382 FTQDDAHLF-CRPDQVKEEFKKVIDLVLYVFNALGFKDYTAQ--------------VSLR 426 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D + TD + I+ +I+E T V E F + Sbjct: 427 DPENKAKYI------------GTDENWAIAEAAIIESAEEKGLPTVHVTGEAAFYGPKLD 474 Query: 275 ---KRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAV 328 K R ++G I Y+LP + G+D + H V + G+M AV Sbjct: 475 FMVKDALGRKWQLGTI---QVDYNLPERFELEYTGSDNQKHRPVMIHRAPFGSMERFIAV 531 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + G +W ++P + ++ I + + +K+ L D E+I Sbjct: 532 LIEHCAGNFPLW---LSPEQFIVLPI---SEKYEEYAKKLSDLLKDSDICGLIDFRDEKI 585 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G + A++ P +IVG K ++ V ++ G MS+EE Sbjct: 586 GRKIRDAEVKKIPYMLIVGEKEEAEGMVSVRKHGEGDLGSMSIEE 630 >gi|27365716|ref|NP_761244.1| threonyl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|31340449|sp|Q8DA13|SYT_VIBVU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|27361865|gb|AAO10771.1| threonyl-tRNA synthetase [Vibrio vulnificus CMCP6] Length = 642 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 87/422 (20%), Positives = 159/422 (37%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IRE+ G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSVFRDLEVFIREKLTEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + N + + Y + G +I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIFCTESQIQDEVTNCIKMVY-DTYQTFGFDNIAVKLSTRPEQRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + MD I E A Y + L Sbjct: 433 ----EIWDQSEEALKQALESMDIAY--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 FD L R + G + ++LP + AT+ G + + M I G++ Sbjct: 472 FDCL-------GRAWQCGTV---QLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++I +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVIMNITDKQA---DYVQEIAQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++ G + + ++ ++ R +++ ++Y + ++ Sbjct: 576 NEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQIAS 635 Query: 445 NR 446 + Sbjct: 636 RK 637 >gi|258515613|ref|YP_003191835.1| threonyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257779318|gb|ACV63212.1| threonyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 634 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 89/403 (22%), Positives = 152/403 (37%), Gaps = 55/403 (13%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA 103 P G + + R+E + G E+ P + + LW +SG +D Y KE + ++ Sbjct: 267 PKGMILRNELEKFWRQEHEKRGYQEIRTPIILNRVLWEQSGHWDHY-KENMYFTQIDNFD 325 Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYS 162 P + I++S + SYR P ++ L R EL G+MR R F DA+ Sbjct: 326 FAVKPMNCPGSMLIYKSKLHSYREFPIRMGELGLVHRHELSGVLHGLMRVRCFTQDDAHI 385 Query: 163 FDLTPEGSKHSYNKM-----FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG 217 F L + + F S + + L + P +A +G D E +A Sbjct: 386 FMLPGQVKDEIIGVIDLVDDFYSIFGFKYHVELSTKPEKA----MGSD---EVWDMATNT 438 Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 + +K +D+ + + F Y D H E Sbjct: 439 LKEAIEAKG-LDYKVNEGDGAF----------------YGPKIDFHLEDCL--------- 472 Query: 278 SARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSH 333 R + G I F K+ L ++ G DG+ H V + G++ ++ Sbjct: 473 -GRTWQCGTIQLDFLMPEKFDL----SYVGEDGQKHRPVMLHRVVFGSIERFIGILTEHF 527 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G +P +AP ++ ++ I D ++ RL + G V D E+IG + Sbjct: 528 AGA---FPTWLAPVQVRVLPITDRQS---DYAVRVVDRLKETGIRVELDQRNEKIGYKIR 581 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A P +++G K + V I+HR G +LE+ I+ Sbjct: 582 EAQTQKIPYMLVIGDKELEKELVAIRHRSQGDLGISTLEDFID 624 >gi|297201097|ref|ZP_06918494.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] gi|197712117|gb|EDY56151.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] Length = 413 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 90/386 (23%), Positives = 156/386 (40%), Gaps = 56/386 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---- 93 G+ WLP G + +RE + G + P L +L+ SG +D Y +M Sbjct: 26 GLPYWLPDGAVVRHVLEEYVRETERAAGYRHVYSPVLGKRELYEISGHWDHYSDDMFPPM 85 Query: 94 -LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 L + + ++ P+ I+RS SYR LP F ++ +R EL G+ R Sbjct: 86 RLGGGEGEGEEVVLRPSLCPHHALIYRSRSHSYRELPLRFAELGGMYRSELSGVLGGLTR 145 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R + DA+ F TPE + R + LG+++ R + GD +F+ Sbjct: 146 VRSIQLNDAHIF-CTPEQAVAEARAALALIRRAYDDLGIRAARYRLS---LPGDGDGKFV 201 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + ++ +D +++ VE A Y DV S Sbjct: 202 PDPELWRRATALLEEVLD------GIEYES-------VEGEAAFYGPKIDVQI-----SD 243 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVI 329 P + + +++ F+ ++ L + G DG+ H V + IG++ R VA +I Sbjct: 244 PAGRESTLSTVQID--FHQPERFDL----HYIGRDGRKHRPVMVHRSIIGSVERAVAHLI 297 Query: 330 ESSHDGKGIIWPDSVAPFKISLINI------KAHDQVCRDACEKIYARLSKVGCDVFWDD 383 E +H G +W +AP ++ ++ + +AHD V R I A LS G Sbjct: 298 E-AHGGAFPVW---LAPVQLVILPVAEEQEERAHDLVRRAEARGIRAELSGPGHGT---- 349 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSK 409 +G++ A L+ P Q ++G + Sbjct: 350 ----LGARVRAARLV--PYQAVIGQR 369 >gi|116747872|ref|YP_844559.1| threonyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] gi|116696936|gb|ABK16124.1| threonyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] Length = 644 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 88/394 (22%), Positives = 156/394 (39%), Gaps = 55/394 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G + A + E R G + PTL +LW SG ++ Y +E + Sbjct: 262 GMVIYHPRGALLRHILEAFEKREHLRRGYHIVMGPTLLKTELWKRSGHFEHY-RENMYFT 320 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +++ P + I++S ++SYR+LP ++++ R E G+ R R+F Sbjct: 321 EIEEQSYGIKPMNCLAHMLIYKSRLRSYRDLPLRYFELGTVHRHERSGVLHGLTRVRQFT 380 Query: 157 MKDAYSFDLTPE---GSKHSYNKMFVSYLRIF---HRLGLKSIPMRAESGPIGGDLSHEF 210 DA+ TPE G S + + IF H + + + P ++ IG D E Sbjct: 381 QDDAHIL-CTPEQLHGEIQSIIDFVIEVMGIFGFNHEMEISTRPAKS----IGSDEDWER 435 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A + D IP + + E A Y DV KL D+ Sbjct: 436 ATSALIDALE--------DKGIPYQ------------VCEGEGAFYGPKIDV---KLRDA 472 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAA 327 L + + ++LP T+ G DG H V + +G++ Sbjct: 473 LDRKWQCAT----------IQCDFTLPDRFDLTYVGVDGNRHRPVMVHRVVLGSLERFIG 522 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 V+ G +P +AP + ++ + Q+ + +Y RL + G V DD E+ Sbjct: 523 VLVEHFAGA---FPTWLAPVQAIVVTV-TDGQI--EFARNMYDRLREAGVRVELDDRNEK 576 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +G + A + P +++G + V+ V + R Sbjct: 577 LGYKIREAQMQKVPYMLVIGDREVAAGGVAPRRR 610 >gi|255659698|ref|ZP_05405107.1| threonine--tRNA ligase [Mitsuokella multacida DSM 20544] gi|260848272|gb|EEX68279.1| threonine--tRNA ligase [Mitsuokella multacida DSM 20544] Length = 639 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 97/448 (21%), Positives = 177/448 (39%), Gaps = 54/448 (12%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +H+ G + P G + + R+ R G Sbjct: 233 YLHMLEEAKKRDHRKLGKQLDLFS--LHEEGPGFPFFHPNGMIVRNELINYWRDVHRRYG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + LW SG +D Y + M D D A+ P + ++ S S Sbjct: 291 YQEIKTPIILNRQLWETSGHWDHYKENMYFTKIDGEDYAI--KPMNCPGGMLVYNSKQHS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ L R E G+ R R F DA+ F +TP+ + + Sbjct: 349 YRDLPLRLGELGLVHRHEKSGELHGLFRVRNFTQDDAHLF-VTPDQVEQEIQHTIDLFDE 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 +++ GL + + P + E LA G + E+ D I+ Sbjct: 408 VYNTFGLTYVA-ELSTRPDDSMGTDEDWELATNGLRKAL------------EHRGLDYIV 454 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT-KYSLPM---- 298 + E A Y D H L DS +G + GT +Y + M Sbjct: 455 N-----EGDGAFYGPKIDFH---LKDS-------------IGRTWQCGTIQYDMQMPEKF 493 Query: 299 SATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + T+ G DG+ H + + G++ ++ ++ G +P +AP + ++ I Sbjct: 494 NLTYVGEDGEKHRPIMLHRVVYGSIERFIGILIENYAG---AFPTWLAPVQARILPITDK 550 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D ++ ++ +G + DD E+IG + + +L P ++VG + ++D V Sbjct: 551 QA---DYAYELRKKMFDLGLRIEVDDRSEKIGKKIRESQMLKTPYSLVVGDQEMADGTVA 607 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ E M +E+ I Y + + Sbjct: 608 VRKYGEQQSETMKVEDFIAYLQEQIATK 635 >gi|37680129|ref|NP_934738.1| threonyl-tRNA synthetase [Vibrio vulnificus YJ016] gi|37198875|dbj|BAC94709.1| threonyl-tRNA synthetase [Vibrio vulnificus YJ016] Length = 655 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 87/422 (20%), Positives = 159/422 (37%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IRE+ G E+ P + LW SG +D Y Sbjct: 270 MQQEAPGMVFWHHNGWSVFRDLEVFIREKLTEYGYQEVKGPLMMDRVLWERSGHWDKYAD 329 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 330 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 388 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + N + + Y + G +I ++ + P +G D Sbjct: 389 RVRGFTQDDAHIFCTESQIQDEVTNCIKMVY-DTYQTFGFDNIAVKLSTRPEQRVGSD-- 445 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + MD I E A Y + L Sbjct: 446 ----EIWDQSEEALKQALESMDIAY--------------EIQEGEGAFYGPKIEF---TL 484 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 FD L R + G + ++LP + AT+ G + + M I G++ Sbjct: 485 FDCL-------GRAWQCGTV---QLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLER 534 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++I +L K G D Sbjct: 535 FIGILIEEYAG---FFPTWLAPEQAVIMNITDKQA---DYVQEIAQKLQKCGIRAKADLR 588 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++ G + + ++ ++ R +++ ++Y + ++ Sbjct: 589 NEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQIAS 648 Query: 445 NR 446 + Sbjct: 649 RK 650 >gi|304436955|ref|ZP_07396918.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369906|gb|EFM23568.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 639 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 93/399 (23%), Positives = 153/399 (38%), Gaps = 57/399 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H+ G + P G + + RE R G E+S P + S LW SG + Y + Sbjct: 257 LHEEGPGFPFFHPNGMALRNALLDYWREVHRRYGYQEISTPVILSRKLWETSGHWFHYRE 316 Query: 92 EMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + ++RS + SYR+LP ++ L R EL G+ Sbjct: 317 NMYTTEIDEEDYAI--KPMNCPGCMLVYRSQLHSYRDLPLRLAELGLVHRHELSGALHGL 374 Query: 150 MRSREFLMKDAYSFDLTP---EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 R R F DA+ F +TP EG +F R F + R E +G D Sbjct: 375 FRVRNFTQDDAHLF-VTPDQIEGEIQHTIDLFDEVYRTFGLTYKAELSTRPEDS-MGTD- 431 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E +A G + +N D +++ E A Y D H Sbjct: 432 --EMWEMATNGLQKAL------------DNRGLDYVVN-----EGDGAFYGPKIDFH--- 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 L DS +G + GT SLP T+ G DG+ H V + G Sbjct: 470 LRDS-------------IGRTWQCGTIQLDMSLPEKFDLTYVGEDGEKHRPVMLHRVVYG 516 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ ++ G +W +AP ++ ++ I E++Y ++ +G V Sbjct: 517 SIERFIGILIENYAGAFPVW---MAPVQVRILPITERHAAY---AEELYKKMFDLGLRVE 570 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+ G + + + P ++VG + + V + Sbjct: 571 VDARNEKTGYKIRESQVKKTPYTLVVGDQEMESGTVAFR 609 >gi|198275270|ref|ZP_03207801.1| hypothetical protein BACPLE_01429 [Bacteroides plebeius DSM 17135] gi|198271853|gb|EDY96123.1| hypothetical protein BACPLE_01429 [Bacteroides plebeius DSM 17135] Length = 496 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 87/166 (52%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ + F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I +L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVNKLRSMGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +EI R T +E S + + Y + Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEIMRRDTLEKETRSCDGIEEYVQN 400 Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ +++ I SYR+LP Q R E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWSTYKNWINSYRDLPILCNQWANVMRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSY 181 ++ ++ T E ++ KM Y Sbjct: 173 WQEGHTAHATREEAEAEAQKMLHVY 197 >gi|157165430|ref|YP_001465955.1| threonyl-tRNA synthetase [Campylobacter concisus 13826] gi|171855003|sp|A7ZAZ7|SYT_CAMC1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|112801821|gb|EAT99165.1| threonyl-tRNA synthetase [Campylobacter concisus 13826] Length = 606 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 94/419 (22%), Positives = 159/419 (37%), Gaps = 61/419 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P L AD+W SG Y +Y KE + Sbjct: 232 GLPIWLPNGGRLRSKLEQLLYKAHRDRGYEPVRGPELLKADVWRRSGHYANY-KENMYFT 290 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + +++S I+SYR+LP F++ + R E G+ R REF Sbjct: 291 TIDETEYGIKPMNCVGHIKVYQSDIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFA 350 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 D++ F P K + ++ I G M + P IGGD + Sbjct: 351 QDDSHIF-CMPSQIKENILEILKFAGTIMENFGF-HYEMEISTKPAKAIGGD------EI 402 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 DT + + D F I E A Y D+ K+ D+L Sbjct: 403 WDTATKALKEALDENGFKY--------------GIDEGGGAFYGPKIDI---KITDAL-- 443 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD--------HYVQMGSYGIGAMRVV 325 R + G I ++LP D + H +GS+ R + Sbjct: 444 -----KRKWQCGTI---QVDFNLPERFDLGYIDANNERQRPVMLHRALLGSF----ERFI 491 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++E + P +AP ++ ++ I AH D ++I L K+ D Sbjct: 492 GILLEHTAGE----LPFFIAPTQVVIVPISDAH----LDYAKEISRELRKINVDSEIASK 543 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E + + A+ P+ V++G V++ V ++ R + DMSL E +N + S Sbjct: 544 NESLNKRIRTAEKQRVPMIVVLGDNEVANKSVALRDRQARTQSDMSLAEFVNLTKEKLS 602 >gi|71275167|ref|ZP_00651454.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon] gi|170731158|ref|YP_001776591.1| threonyl-tRNA synthetase [Xylella fastidiosa M12] gi|238687955|sp|B0U5E3|SYT_XYLFM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71163976|gb|EAO13691.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon] gi|167965951|gb|ACA12961.1| threonyl-tRNA synthetase [Xylella fastidiosa M12] Length = 635 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 85/422 (20%), Positives = 156/422 (36%), Gaps = 48/422 (11%) Query: 16 RDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 +DAE H+ + + + + G+ W P G + IR +G E+ P Sbjct: 238 QDAEKRDHRKIGKAQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCP 297 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + LW +SG +D+Y KE + D + P + +F + SYR+LP + Sbjct: 298 QILDVSLWQKSGHWDNY-KENMFFTDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRY 356 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + R+E G++R R F D + F T + L+++ G + Sbjct: 357 GEFGACHRNEPSGALHGLLRVRGFTQDDGHIF-CTEAQIEAEVTAFHRQALQVYADFGFE 415 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 +I ++ P +G LS + A C ++ + P Sbjct: 416 NIQIKIALRPDKRLGDSLSWDKAEAALRAALSA-CEVEWQELPGEG-------------- 460 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y + H L D++ ++ ++ G +Y S + Sbjct: 461 -----AFYGPKIEYH---LKDAIGRTWQLGTIQVDFMMPGRLGAEYVDERSQ-------R 505 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H V + +G+M ++ + G IWP +AP ++ + NI + E++ Sbjct: 506 RHPVMLHRAIVGSMERFIGILIEHYAG---IWPTWLAPVQVVIANIT---DAQYEYAEQV 559 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 + L G V D E+IG + L P ++VG + + V ++ T RED Sbjct: 560 HKALLNQGFRVNIDLRNEKIGYKIREHTLQRVPYLLVVGDREKENGTVAVR---TCSRED 616 Query: 429 MS 430 + Sbjct: 617 LG 618 >gi|229496735|ref|ZP_04390446.1| prolyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] gi|229316281|gb|EEN82203.1| prolyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] Length = 517 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 5/162 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ F +G+ V S+G+ + R++ A+I S D G++ Sbjct: 261 KALQSGTSHFLGQNFAKAFDVYFLNKEGQRELVWATSWGV-STRLMGALIMSHSDDNGLV 319 Query: 340 WPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVA 395 P S+AP ++ ++ I + H R+ E + L G V DD ++ G +FA Sbjct: 320 LPPSLAPIQVVIVPIYKTEEHLATIRERVEPLIKDLRARGISVKLDDNDNKKPGWKFAEY 379 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++ +G++ + VE+ R T +E ++ E + ++ Sbjct: 380 ELKGIPVRLALGARDLEQGTVEVARRDTLTKETVAFEGIADH 421 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ +++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 142 EEELIVRPTSETIIWSTYKNWIQSYRDLPVLCNQWANVVRWEMRTRL-FLRTAEFLWQEG 200 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T E + KM Y Sbjct: 201 HTAHATREEAVAEAEKMLEVY 221 >gi|15802131|ref|NP_288153.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 EDL933] gi|15831680|ref|NP_310453.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|168762217|ref|ZP_02787224.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|168788115|ref|ZP_02813122.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|168800100|ref|ZP_02825107.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|187776029|ref|ZP_02799987.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|188024843|ref|ZP_02774486.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|189010441|ref|ZP_02807141.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|189402338|ref|ZP_02781727.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|189403439|ref|ZP_02795487.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|208810744|ref|ZP_03252620.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208816647|ref|ZP_03257767.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|209400429|ref|YP_002270789.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|217328990|ref|ZP_03445071.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|254793336|ref|YP_003078173.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|291282899|ref|YP_003499717.1| Threonyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|22654116|sp|Q8XE27|SYT_ECO57 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238065112|sp|B5YQ07|SYT_ECO5E RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|12515733|gb|AAG56706.1|AE005395_2 threonine tRNA synthetase [Escherichia coli O157:H7 str. EDL933] gi|13361893|dbj|BAB35849.1| threonine tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|187769425|gb|EDU33269.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|188016225|gb|EDU54347.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|189000290|gb|EDU69276.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|189356196|gb|EDU74615.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|189360618|gb|EDU79037.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|189367509|gb|EDU85925.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|189372060|gb|EDU90476.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|189377572|gb|EDU95988.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|208725260|gb|EDZ74967.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208730990|gb|EDZ79679.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|209161829|gb|ACI39262.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|209768828|gb|ACI82726.1| threonine tRNA synthetase [Escherichia coli] gi|209768830|gb|ACI82727.1| threonine tRNA synthetase [Escherichia coli] gi|209768832|gb|ACI82728.1| threonine tRNA synthetase [Escherichia coli] gi|209768834|gb|ACI82729.1| threonine tRNA synthetase [Escherichia coli] gi|209768836|gb|ACI82730.1| threonine tRNA synthetase [Escherichia coli] gi|217318337|gb|EEC26764.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|254592736|gb|ACT72097.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|290762772|gb|ADD56733.1| Threonyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|320188406|gb|EFW63068.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212] gi|320652208|gb|EFX20506.1| threonyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687] gi|320657809|gb|EFX25571.1| threonyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658384|gb|EFX26078.1| threonyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905] gi|326342086|gb|EGD65867.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044] gi|326343638|gb|EGD67400.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125] Length = 642 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 88/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V K+ ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSMDVNEVI 625 >gi|304406649|ref|ZP_07388304.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304344182|gb|EFM10021.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 645 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 86/423 (20%), Positives = 167/423 (39%), Gaps = 55/423 (13%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + + I + + R G + P L + +L+ SG ++ Y ++M Sbjct: 264 QGLPLWLPNGARVRRTMERYIVDLEERLGYSHVYTPVLANVELYKISGHWEHYSEDMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P + +++S ++SYR+LP ++ R E+ G+ R R Sbjct: 324 MALDNEELVLRPMNCPHHMMVYKSDMRSYRDLPIRVAELGTMHRYEMSGALTGLHRVRAM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F P+ K + ++ +++ G+K R LS+ D Sbjct: 384 TLNDAHIF-CRPDQIKEEFARVINLIRQVYADFGIKEYRFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP----------YAATSDVHNE 265 +T+ + P +N L +VE+ P Y DV Sbjct: 429 PQDTEKY---------FPDDNMWEMSQRMLREVVEELELPFFEAEGEAAFYGPKLDV--- 476 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRV 324 ++ +L + + +S ++ F ++ L + G DGK H + G I M Sbjct: 477 QIKTALGKEETLSTAQLD----FLLPERFEL----EYVGDDGKKHRPVVIHRGIISTMER 528 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + A + + G +W ++P +I + A+D R+ EK+ A G D Sbjct: 529 MTAYLLENFAGALPLW---LSPMHARVIPVSSAYDGYAREVEEKLLA----AGVRAESDL 581 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E++G + A L P +IVG V ++ R G + E+I + + Sbjct: 582 RNEKLGYKIREAQLEKLPYMLIVGDNEAQAGTVSVRKRGEGDIGSKEVSELIALLTEEIA 641 Query: 444 NNR 446 + Sbjct: 642 TKK 644 >gi|281420331|ref|ZP_06251330.1| proline--tRNA ligase [Prevotella copri DSM 18205] gi|281405633|gb|EFB36313.1| proline--tRNA ligase [Prevotella copri DSM 18205] Length = 493 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 83/161 (51%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ T+ + K YV S+G+ + R++ A+I D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTYLNKENKPEYVWATSWGV-STRLMGALIMVHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYA---RLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I D+ K+ +L ++G V +DD ++ G +FA Sbjct: 295 VLPPKLAPIQVVIVPINKGDEQLAQITAKLQPVIDQLRELGITVKYDDNPAKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++ +G + + ++ +EI R T +E++S + ++ Sbjct: 355 YELKGVPVRLAMGGRDLENNTIEIMRRDTLEKENVSFDGIV 395 Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ +I PT E ++ + +++ I S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 118 DEELIIRPTSETIIWNTYKNWIHSWRDLPILCNQWCNVMRWEMRTR-PFLRTSEFLWQEG 176 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T E ++ +M Y Sbjct: 177 HTAHATKEEAEAKAQEMLKVY 197 >gi|167626332|ref|YP_001676832.1| threonyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189083609|sp|B0TY89|SYT_FRAP2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|167596333|gb|ABZ86331.1| threonyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 635 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 78/382 (20%), Positives = 142/382 (37%), Gaps = 48/382 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + S GI W G + V +R + G E+ P + LW +SG Y + Sbjct: 256 QEDSPGIAFWHDNGVRIWREVEDYMRASNKKYGCGEIRTPLIADFSLWEKSGHASKYAEN 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M N I P + ++ + + SYR+LP + + R+E G+MR Sbjct: 316 MFATKSENRDFAIR-PMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLMR 374 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F PE + M ++ G ++ P IG D + Sbjct: 375 VRSFTQDDGHIF-CAPEQVEEEVILMVKQCFEVYKDFGFNDFTVKIALRPENRIGNDETW 433 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + S+ + + + N ++ ++ A Y + H L Sbjct: 434 DK-------------SEQMLKNALDANNVAYE-------LLPGEGAFYGPKIEFH---LK 470 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 D++ R + G I +S+P + AT+ +G V + +G++ Sbjct: 471 DAI-------GRSWQCGTI---QLDFSMPDRLGATYIDKNGNKQVPVMLHRAIVGSLERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W + P +++++ I H + C+K++ L K G D Sbjct: 521 IGMLIEHYAGNMPLW---LTPVQVAVMGISNHQD---EYCQKVFETLEKNGIRAKLDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVG 407 E+IG + LL P VI+G Sbjct: 575 EKIGFKIREHTLLRVPYLVILG 596 >gi|70729481|ref|YP_259219.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] gi|68343780|gb|AAY91386.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] Length = 640 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRDNGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y + M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYAENMFTTESESRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY-LRIFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ + ++ G K Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEDQMQAESAAFIKLTMDVYADFGFK 413 Query: 192 SIPMRAESGP---IGGD 205 I M+ + P +G D Sbjct: 414 DIEMKLSTRPEKRVGSD 430 >gi|240047193|ref|YP_002960581.1| prolyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581] gi|239984765|emb|CAT04739.1| Prolyl-tRNA synthetase [Mycoplasma conjunctivae] Length = 480 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 4/166 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y G +S TFK D + YV S+G+ + R++ A+I + D +GI Sbjct: 221 GRALQAGTSHYLGQNFSKNFDITFKNKDNQLEYVYQTSWGV-STRLIGALIMTHGDDRGI 279 Query: 339 IWPDSVAPFKISLIN--IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 I P ++A +K+ ++ + H + + A K+ L D Q+G + A ++ Sbjct: 280 IIPPAIAEYKVDILAFFVNKHPNL-KKAILKLSDELDDFHITNRVDLSDNQVGFKIANSE 338 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +LG P+++ +G + + +V + R T ++ + +++N+ F Sbjct: 339 VLGTPVRIEIGPRDLEAKQVVVVRRDTLEKKIVPTSQIVNHLEQLF 384 >gi|239624742|ref|ZP_04667773.1| prolyl-tRNA synthetase [Clostridiales bacterium 1_7_47_FAA] gi|239521128|gb|EEQ60994.1| prolyl-tRNA synthetase [Clostridiales bacterium 1_7_47FAA] Length = 479 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 1/156 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ F D YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFDIQFTDKDNTLKYVHQTSWGM-TTRMIGALIMVHGDDNGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ ++ ++ + D ++ RL K G V DD + G +FA ++ Sbjct: 284 VLPPRIAPVQVMIVPVQQQKEGVLDKAFQLEDRLKKAGFSVKTDDSEKSPGWKFADCEMR 343 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL+V +G K + ++ + R T + +SL+E+ Sbjct: 344 GIPLRVEIGPKDMEKNQAVLVRRDTHEKSFISLDEL 379 >gi|153955810|ref|YP_001396575.1| threonyl-tRNA synthetase [Clostridium kluyveri DSM 555] gi|219856177|ref|YP_002473299.1| hypothetical protein CKR_2834 [Clostridium kluyveri NBRC 12016] gi|189083603|sp|A5N258|SYT_CLOK5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783517|sp|B9E5W0|SYT_CLOK1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146348668|gb|EDK35204.1| ThrS [Clostridium kluyveri DSM 555] gi|219569901|dbj|BAH07885.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 637 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 91/411 (22%), Positives = 161/411 (39%), Gaps = 49/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH+ G + P G + + RE + E+ P + + +LW SG +D Y K Sbjct: 255 IHEEGPGFPFFHPKGMVIRNTLQNFWREMHYKADYSEIMTPIILNEELWHRSGHWDHY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D P + ++++ I+SYR+LP + ++ + R E G+M Sbjct: 314 ENMYFTKIDDGNYAIKPMNCPGSILVYKNDIRSYRDLPKRYAEMGVVHRHEKSGALHGLM 373 Query: 151 RSREFLMKDAYSF----DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 R R F DA+ F D+ E K + ++ +IF + R E +G D Sbjct: 374 RVRCFTQDDAHIFVTKDDIADEIIK--VIDLIDNFYKIFGFEYFVELSTRPEDS-MGSDE 430 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E A T + +D+ I + F Y D H Sbjct: 431 DWE----AATEGLKNALKMVGLDYKINEGDGAF----------------YGPKIDFH--- 467 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVV 325 L D + + ++ F K+ L + GADG+ H V + G++ Sbjct: 468 LKDCIGRTWQCGTVQLD----FQMPEKFDL----NYIGADGEKHRPVMIHRVVFGSIERF 519 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP ++ ++NI A + + + +V CD+ Sbjct: 520 IGILIEHYAGA---FPAWIAPVQVQVMNITDAQADYVAEVAKTLKENNIRVECDI----R 572 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + A + P +I+G K + D + ++ R G MSLE+ I Sbjct: 573 NEKIGYKIREAQMHKVPYMIILGDKEMKDKNISVRSRKEGDIGAMSLEDFI 623 >gi|94495624|ref|ZP_01302204.1| threonyl-tRNA synthetase [Sphingomonas sp. SKA58] gi|94425012|gb|EAT10033.1| threonyl-tRNA synthetase [Sphingomonas sp. SKA58] Length = 665 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 95/430 (22%), Positives = 155/430 (36%), Gaps = 68/430 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G W P G N+ A +R + G E+ P + A W +SG + Y + Sbjct: 265 LQQEAHGSVFWHPKGYVIWRNLEAYMRRAIDDAGYREVKTPQVMDARQWEQSGHWGKYRE 324 Query: 92 EMLRLADR-----------NDKA--MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 M + D +D A M P + IFR IKSYR+LP FY+ Sbjct: 325 NMFVIPDEVPNVEDEGPLVSDDADWMALKPMNCPAHVLIFRQGIKSYRDLPLRFYENGCC 384 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 R+E G+MR R+F DA+ F V +R F L + Sbjct: 385 HRNEPHGALHGLMRVRQFTQDDAHIF---------CREDQIVEEVRAFCALADR------ 429 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 I D + + + F +++ D E+ A Sbjct: 430 ----IYKDFGFTYSIKLALRPEKRFGTEEMWD-----------------KAEEELRNAVA 468 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIE------VGHIFYFGTKYS---LP--MSATFKGAD 306 A + ++ LP A +E +G + GT S LP + A++ G D Sbjct: 469 AAGLNTPDYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYIGED 528 Query: 307 GKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 G+ H M I G+ ++ + GK +W +AP + + I + D Sbjct: 529 GERHRPVMLHRAIFGSYERFIGILIEHYAGKFPLW---LAPVQAVVATIVSD---ADDYA 582 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + RL G D E+I + L P ++VG + + V ++ Sbjct: 583 KATVDRLRAAGIRAELDTRNEKINYKVREHSLAKVPNLLVVGRREADEGTVALRELGKDG 642 Query: 426 REDMSLEEVI 435 + +SL++VI Sbjct: 643 QSVLSLDDVI 652 >gi|260590692|ref|ZP_05856150.1| proline--tRNA ligase [Prevotella veroralis F0319] gi|260537353|gb|EEX19970.1| proline--tRNA ligase [Prevotella veroralis F0319] Length = 493 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 83/161 (51%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ T+ D K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKSFDVTYLNKDNKPEYVWATSWGV-STRLIGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYA---RLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I ++ ++ K+ L ++G V +DD ++ G +FA Sbjct: 295 VLPPKIAPIQVVIVPIFKGEEQLKELTAKLQPVIDSLRELGITVKYDDTDNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++ +G + + ++ +E R T +E +S + ++ Sbjct: 355 YELKGVPVRLAMGGRDLENNTIEFMRRDTLEKESVSFDGIV 395 >gi|315925309|ref|ZP_07921520.1| proline--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621210|gb|EFV01180.1| proline--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] Length = 482 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 82/434 (18%), Positives = 166/434 (38%), Gaps = 80/434 (18%) Query: 14 NPRDAEIAS--HKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 PRD + A ++ +T M+ + KG P G +N+ TG M Sbjct: 13 TPRDVDFARWYTDVISKTEMVDYAPVKGFMVIRPYGYAIWENIKEAFDRRFKETGHKNMY 72 Query: 71 VPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIFRSHIKSY 125 P L + L E+ + + E+ + K + PT E ++ ++ + SY Sbjct: 73 FPLLIPESMLQTEAEHVEGFAPEVAWVTRGGGKELGERLAIRPTSETIICSMYSKWLNSY 132 Query: 126 RNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 R LPF + Q +++ RP +R+ EFL ++ ++ T E ++ +M Y Sbjct: 133 RQLPFKYNQWCNVVRWEKTTRP---FLRTSEFLWQEGHTLHETEEEARAETMQMLNIYRE 189 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + ++DFM P+ ++ Sbjct: 190 V---------------------------------------TEDFMAIPM---------VV 201 Query: 244 SLNSIVEQWT---APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 S E++ A Y + +H+ + ++ G Y G ++ Sbjct: 202 GQKSEKEKFAGAEATYTIEALMHD--------------GQALQSGTSHYLGQHFTKAFDI 247 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ++ + K S+G+ + R++ +I D G++ P +AP ++ +I + AH Sbjct: 248 SYLSRENKQENPYHTSWGV-STRLIGGLIMVHGDDNGLVLPPKIAPIQVVIIPVAAHKPR 306 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +A K+ +L KV DD G +F ++ G P+++ +G + + + + Sbjct: 307 VAEAAGKLTDQLGKV-FRAELDDSDNSPGWKFNQWEMKGVPIRLEIGPRDLERGECVLAR 365 Query: 421 RLTGIREDMSLEEV 434 R TG + +SL+++ Sbjct: 366 RDTGEKTAVSLDDI 379 >gi|295099750|emb|CBK88839.1| threonyl-tRNA synthetase [Eubacterium cylindroides T2-87] Length = 391 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 89/414 (21%), Positives = 159/414 (38%), Gaps = 53/414 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + +++ G+ +LP G + + EE + G + P + S +LW SG ++ Y K Sbjct: 6 VSEYAPGMPIFLPNGMILRNILEQFWYEEHTKAGYQFIKTPIMMSKELWETSGHWEHY-K 64 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D+ P + ++ S + SY+ LP+ ++ R E G+ Sbjct: 65 ENMYTTMVDDREFAIKPMNCPGALLVYNSSLHSYKELPYRIGELGQVHRHEASGALNGLF 124 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLS 207 R R F DA+ F +TP+ + + RI+ GL + R ESG IG S Sbjct: 125 RVRTFTQDDAHLF-VTPDQIESEVKNVLGLIDRIYSVFGLPYDIELSTRPESGYIG---S 180 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E ++ C ++ + + F Y D+H + Sbjct: 181 EEIWQKSEEALANA-CIHAGKEYKVNPGDGAF----------------YGPKLDIH---I 220 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGA 321 DSL G ++ GT +LP T+ DG K V + G+ Sbjct: 221 KDSL-------------GRVWQCGTIQLDMNLPERFGCTYVDKDGSKKTPVMLHRVIYGS 267 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + ++ G +W +AP + +I + H + + +K+ L G V Sbjct: 268 IERFIGILIEHFAGHFPLW---LAPRQFVVIPV--HQEKHLEYAQKVVKALQDAGMRVEL 322 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E++G + A + P Q++VG + V I+ + M+L E + Sbjct: 323 DDRNEKLGYRVREAQMSKVPYQIVVGDGEAENETVTIRQSGKKESKTMALNEAL 376 >gi|167464457|ref|ZP_02329546.1| prolyl-tRNA synthetase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 424 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 9/163 (5%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GT ++ F + + +V S+G+ + R++ A+I + D +G+ Sbjct: 168 GKAVQAGTSHYLGTNFAEAFDIKFLNRENQHEFVHTTSWGV-STRLIGAMIMAHGDDRGL 226 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 + P VAP ++ +I I K DQV E + + K G V D + G +F Sbjct: 227 VMPPKVAPTQVIMIPIGPAKTRDQVLAKTYE-LQTEIKKAGFRVRVDAREQSPGWKFNEY 285 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEV 434 ++ G P++V +G + + + +V + R+TG + +D +EE+ Sbjct: 286 EMRGVPVRVELGPRDMENGQVILVSRVTGEKKVVAQDNLVEEI 328 >gi|171058428|ref|YP_001790777.1| threonyl-tRNA synthetase [Leptothrix cholodnii SP-6] gi|238689097|sp|B1XYZ3|SYT_LEPCP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|170775873|gb|ACB34012.1| threonyl-tRNA synthetase [Leptothrix cholodnii SP-6] Length = 637 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 99/434 (22%), Positives = 160/434 (36%), Gaps = 68/434 (15%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 KY + + + RD +L L I +H+ G+ W P G V +R Sbjct: 233 QKYLVMLEEAEKRDHRKLGRELDLF--HIDEHAPGVVFWHPKGWTVWQQVEQYMRRVYRD 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + LW ++G +D Y M +++ D A+ P + IF+ I Sbjct: 291 NGYQEVKGPQILDKGLWEKTGHWDKYRDNMFTTESEKRDYAL--KPMNCPGHILIFKQGI 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF----DLTPEGSKHSYNKM 177 KSYR+LP + + R+E G+MR R F D + F + PE Sbjct: 349 KSYRDLPLRYGEFGQCHRNEPSGGLHGIMRVRGFTQDDGHIFCTEDQILPECD------A 402 Query: 178 FVSYL-RIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCS--KDFMDFP 231 F + L +++ G I + + P IG D L D E + S +F Sbjct: 403 FTTLLQKVYADFGFTEILYKVATRPEKRIGSD------ELWDKAEAALIASLRNSGCEFE 456 Query: 232 I-PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 I P E + + L D+L R + G I Sbjct: 457 ISPGEGAFYGPKVEYT--------------------LKDAL-------GRHWQCGTI--- 486 Query: 291 GTKYSLP--MSATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 +SLP + A + G+ H V + +G++ ++ H G W +AP Sbjct: 487 QVDFSLPERLDAEYVAESGERLHPVMLHRAILGSLERFIGILIEEHAGALPFW---LAPT 543 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 ++S++NI D + L K G V D E+I + L P ++VG Sbjct: 544 QVSVLNITDGQA---DYARDVARSLQKQGLRVALDLRNEKITYKIREHSLQKVPYLIVVG 600 Query: 408 SKFVSDSKVEIKHR 421 K + V ++ R Sbjct: 601 DKERASGAVAVRAR 614 >gi|125624939|ref|YP_001033422.1| ThrS protein [Lactococcus lactis subsp. cremoris MG1363] gi|166223350|sp|A2RN48|SYT_LACLM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|124493747|emb|CAL98736.1| ThrS protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071738|gb|ADJ61138.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000] Length = 646 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 87/412 (21%), Positives = 168/412 (40%), Gaps = 37/412 (8%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G WLP G + + +++ + G + P + + + + +SG + Y ++M Sbjct: 262 GTAYWLPAGATIRRIIERFVVDQEVKNGYQHVITPVMMNLNTYKQSGHWQHYHEDMYPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D + M P + I++ H+ SYR LP + + R E G+ R RE Sbjct: 322 DMGDGEEMELRPMNCPSHIAIYKHHVHSYRELPIRIAEFGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + E + ++K+ + ++ G+ R LS+ D Sbjct: 382 TLNDGHTF-VMLEQVQEEFSKILQLIMDMYRDFGINDYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T + D M + D + L+ + E A Y D+ ++ +L Sbjct: 427 PKDTVKYFPDDEMWEKSQAMLKATMDDMKLDYVEAEGEAAFYGPKLDI---QVKTALGNE 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ + F Y GADG+ H M G+ + R +A +IE Sbjct: 484 ETLSTIQLDFLNPENFDISYV--------GADGEKHRPVMIHRGVISTLERFIAYLIEVY 535 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP + ++I + ++++ D KI L G V D+ E++G + Sbjct: 536 ---KG-AFPTWLAPTQATIIPV--NNEIHADYAWKIQRELQDKGFRVVVDEANEKMGWKI 589 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + P Q+++G + +D V I+ + E + E+ I S +N Sbjct: 590 RQSQTHKIPYQIVIGDQEQADGTVNIRRYGSKETEVIPFEDFIEKISADVAN 641 >gi|56749447|sp|Q7MK65|SYT_VIBVY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 642 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 87/422 (20%), Positives = 159/422 (37%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IRE+ G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSVFRDLEVFIREKLTEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + N + + Y + G +I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIFCTESQIQDEVTNCIKMVY-DTYQTFGFDNIAVKLSTRPEQRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + MD I E A Y + L Sbjct: 433 ----EIWDQSEEALKQALESMDIAY--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 FD L R + G + ++LP + AT+ G + + M I G++ Sbjct: 472 FDCL-------GRAWQCGTV---QLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++I +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVIMNITDKQA---DYVQEIAQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++ G + + ++ ++ R +++ ++Y + ++ Sbjct: 576 NEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQIAS 635 Query: 445 NR 446 + Sbjct: 636 RK 637 >gi|289422357|ref|ZP_06424203.1| threonine--tRNA ligase [Peptostreptococcus anaerobius 653-L] gi|289157192|gb|EFD05811.1| threonine--tRNA ligase [Peptostreptococcus anaerobius 653-L] Length = 641 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 97/452 (21%), Positives = 177/452 (39%), Gaps = 56/452 (12%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L MI + G +LP G ++ E Sbjct: 231 YLKMLEEAKKRDHRKIGKELGLF--MIPEEGPGFPLFLPRGTALKQSLMKYWEEIHREAH 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKS 124 +E+ P + + LW SG + Y + M + D D A+ P + ++S + S Sbjct: 289 YVEIETPIILNRKLWETSGHWFHYKENMYTVQIDEEDYAI--KPMNCPGAMLYYKSQLHS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+ P + R EL G+MR R F DA+ F + PE + + + Sbjct: 347 YRDFPMRVGERGRVHRHELSGALHGLMRVRAFTQDDAHIF-MLPEQIRDEIKGVVNLIDK 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ + G S + + P + E +A+ G E D I+ Sbjct: 406 VYTKFGF-SYHVELSTRPEDSMGTDEEWAIAEDGLRGAL------------EELGMDYIV 452 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--M 298 + E A Y D H L D +G + GT LP Sbjct: 453 N-----EGDGAFYGPKIDFH---LRDC-------------IGRTWQCGTIQLDMQLPQRF 491 Query: 299 SATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-A 356 AT+ G DG+ H + + +G++ ++ ++ GK +W +AP ++ ++++ Sbjct: 492 DATYVGKDGEKHRPIMIHRVALGSIERFIGILIENYAGKFPVW---LAPCQVKVLSVSDK 548 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +++ ++ EK++ G V DD E++G + A L P ++VG K + + Sbjct: 549 YNEFAKELVEKLF----DAGIRVELDDRAEKVGFKIREAQLEKIPYMLVVGEKEMESGLL 604 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 ++ R G MS++E + + + V Sbjct: 605 SVRSRDEGELGQMSIDEFLAKIKKQIEDRENV 636 >gi|329961279|ref|ZP_08299445.1| threonine--tRNA ligase [Bacteroides fluxus YIT 12057] gi|328531944|gb|EGF58761.1| threonine--tRNA ligase [Bacteroides fluxus YIT 12057] Length = 646 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 94/432 (21%), Positives = 160/432 (37%), Gaps = 73/432 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q+R E+ P + + L++ SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRIRLQDFLRRIQSRYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K +LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPDQVKD-------EFLRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S F +F D ++ + + E W A + EK Sbjct: 410 --------VFQSMAFENF---EAQISLRDKVNRDKYIGSDENWEKAEQAIIEACEEKGLK 458 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + GAD + H V + Sbjct: 459 AKVEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIH 518 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W PD VA IS + D ++ L Sbjct: 519 RAPFGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNDYALEVKQLL 569 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + D+ E+IG + ++ P ++VG K + ++ ++ + G + M +E Sbjct: 570 KQYDIRALVDERNEKIGRKIRDNEMKRIPYMLVVGEKEAENKEIAVRKQGEGDQGTMKIE 629 Query: 433 EVINYASHRFSN 444 E S N Sbjct: 630 EFAKKVSEEVRN 641 >gi|160935092|ref|ZP_02082478.1| hypothetical protein CLOLEP_03968 [Clostridium leptum DSM 753] gi|156866545|gb|EDO59917.1| hypothetical protein CLOLEP_03968 [Clostridium leptum DSM 753] Length = 660 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 93/453 (20%), Positives = 169/453 (37%), Gaps = 68/453 (15%) Query: 15 PRDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIR 58 P+ +E+ +H + H+K G+ LP G + + + + Sbjct: 238 PKASELTAHLEAMEEAKKRDHNKLGRELGYFTTCDIIGQGLPILLPNGARVIQLLQRFVE 297 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD--RNDKAMIYGPTHEEVMTD 116 +E+ + G + P + +DL+ SG +D Y M L D ++D+ P Sbjct: 298 DEEQKRGWLLTKTPYMAKSDLYKLSGHWDHYKDGMFVLGDEEKDDEVFALRPMTCPFQYQ 357 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 + + +SYR+LP + + FR+E G++R R+F + + + P+ + + Sbjct: 358 AYLNKKRSYRDLPLRYNETSTLFRNEASGEMHGLIRVRQFTISEGHLM-CRPDQLEEEFK 416 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + LGL D+S+ F + + + + D + Sbjct: 417 SCLQLANYMLETLGLAE------------DVSYRFSQWDPEDKDKYIGTPEQWDEAQSAM 464 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY--FGTK 293 D + +I A Y D+ + +F K + I++ + FG + Sbjct: 465 KRILDHLGIEYAIGVGEAAFYGPKLDIQIKNVF-----GKEDTLITIQIDQLLAEKFGME 519 Query: 294 YSLPMSATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIW--PDSVA 345 Y ADGK H +G Y R +A +IE + G +W P+ V Sbjct: 520 YV--------DADGKAKNPYIIHRTSIGCY----ERTLALLIE-KYAGALPMWLMPEQVR 566 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 IS + +V R+ L G D E+IG + A + P +I Sbjct: 567 VLPISEKFLDKALEVDRE--------LKAQGIRSTADSRNEKIGYKIREAQMEKIPYMLI 618 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 +G K V ++ V ++ R G+ MSLE + A Sbjct: 619 IGEKEVQENVVSVRSRKDGVLGSMSLETFLEKA 651 >gi|254579094|ref|XP_002495533.1| ZYRO0B13596p [Zygosaccharomyces rouxii] gi|238938423|emb|CAR26600.1| ZYRO0B13596p [Zygosaccharomyces rouxii] Length = 454 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 93/456 (20%), Positives = 180/456 (39%), Gaps = 62/456 (13%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIR-EEQNRTGA 66 I ++ P + ASH++ R + S G +LP G K + + ++ ++Q + G Sbjct: 22 IAKKPPGSSADASHEVSNRQKLFITDPISPGSIFFLPNGTKIFNKLIQFMKLQQQFKYGF 81 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKS 124 E+ P + LW +SG +D+Y ++M R+ + YG P + +F+ +S Sbjct: 82 KEVVTPLIYRKSLWEQSGHWDNYKEDMFRVEGHDTSKEEYGLKPMNCPGHCMVFKRFDRS 141 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF----V 179 Y LP R+E G+ R R+F D + F TP+ + K + Sbjct: 142 YSELPLRLSDFSPLHRNEASGALSGLTRVRKFHQDDGHIF-CTPDQVESEIAKCLKLVDM 200 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y ++F P+ +L++E L + + F D + D+ Sbjct: 201 CYTKVF---------------PLSPELANEVYTLELSTRPEHFIG----DVKV----WDY 237 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + L +I+ ++ P+ + F + +V+ + + + LP Sbjct: 238 AETV-LKNILNKFGKPWELNE---ADGAFYGPKIDIKVTDHTGKYHQVATIQLDFQLPER 293 Query: 300 ATFKGADGKDHY-----VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 K D + Y + +G R +A +I+S+H GK WP + P + +I + Sbjct: 294 FDLKYKDRDNTYKRPIMIHRAVFG-SVERFMAILIDSNH-GK---WPFWLNPRQAMIIPV 348 Query: 355 KAHDQVCRDACEKIYARLSKVG--------------CDVFWDDMGEQIGSQFAVADLLGF 400 Q DAC+ ++ +L G + D+ E +G + A + + Sbjct: 349 NTKRQGQVDACKDLFLKLRGQGNENSTDPIPLNSFHFNADLDERPEPVGYRIKDALMKNY 408 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +I+G K V + I+ R E ++ +E+ N Sbjct: 409 SYLIIIGDKEVETGRYAIRTREDRQLEHLTDDEIFN 444 >gi|91215264|ref|ZP_01252236.1| threonyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] gi|91186869|gb|EAS73240.1| threonyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] Length = 648 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 86/398 (21%), Positives = 161/398 (40%), Gaps = 59/398 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-- 95 G+ WLP G D + +++ Q G + P + +L++ SG + YG++ + Sbjct: 262 GLPLWLPKGAALRDRLEKFLKDAQENAGYQPVVSPHIGQKELYMTSGHFQKYGEDSFQPI 321 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 ++ + + P + +I+ + SYR+LP + + +R E G+ R R Sbjct: 322 KTPQDGEEYLLKPMNCPHHCEIYNAQTWSYRDLPQRYAEFGTVYRYEQSGELHGLTRVRG 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F TPE + K+ L +F LG ++ + + L Sbjct: 382 FTQDDAHIF-CTPEQLDEEFKKVIDLVLYVFGSLGFENFTAQ--------------VSLR 426 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNS---------IVEQWTAPYAATSDVHNE 265 D + D EN + LN+ IV+ A Y D Sbjct: 427 DPENPSKYIGSD--------ENWKKAESAILNAAEEKGLTYKIVKGEAAFYGPKLDFM-- 476 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAM 322 + D+L R ++G I Y+LP +KG+D + H V + G++ Sbjct: 477 -VKDAL-------GRQWQLGTI---QVDYNLPERFELEYKGSDNEMHRPVMIHRAPFGSL 525 Query: 323 -RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 R +A +IE + G +P + P + ++++I + + +K+ + L K + Sbjct: 526 ERFIAILIEHT----GGNFPLWLMPEQATILSI---SEKYENYSKKVLSLLKKHEIRATF 578 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ GE +G + A++ P +IVG V + V ++ Sbjct: 579 DNRGETMGKKIREAEMNKTPYMLIVGESEVENETVSVR 616 >gi|294649364|ref|ZP_06726795.1| threonine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] gi|292824734|gb|EFF83506.1| threonine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] Length = 640 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 153/418 (36%), Gaps = 60/418 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q G E+ P + LW +SG +Y + Sbjct: 255 MQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSESRNYAV-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGQEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 L D E + + D P E + I + Sbjct: 431 ----ALWDIAEKSLADALDDAGLAWDLQPGEGAFYGPKIEFS------------------ 468 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYG 318 L D L G ++ GT ++LP + A++ D +D V + Sbjct: 469 --LKDCL-------------GRVWQCGTIQCDFNLPIRLDASYVTEDNERDQPVMLHRAI 513 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G+ ++ + G P +AP + ++NI DACE++ A+L + G Sbjct: 514 LGSFERFIGILIEHYAG---FMPPWLAPIQACVMNITDSQA---DACEQVVAKLKENGLR 567 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P +++G + V + V ++ R MS++ I+ Sbjct: 568 AISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSIDAFID 625 >gi|269958355|ref|YP_003328142.1| threonyl-tRNA synthetase [Anaplasma centrale str. Israel] gi|269848184|gb|ACZ48828.1| threonyl-tRNA synthetase [Anaplasma centrale str. Israel] Length = 636 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 9/199 (4%) Query: 14 NPRDAEIASHKLMLR-TGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 N ++AE H+ + + G H ++ G W G + IR + + G +E+ Sbjct: 236 NMQEAEKRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRTIEEYIRCKLEKHGYLEVK 295 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + LW +SG ++ + KE + + + + K + P + IF+S I+SY+ LP Sbjct: 296 TPIMLDRKLWEKSGHWEKF-KENMFVVENDKKELAIKPMNCPCHVQIFKSKIRSYKELPI 354 Query: 131 TFYQIQLKFRDELR-PRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + + R+E +G+MR R F DA+ F T E + + + + ++ G Sbjct: 355 RMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIF-CTHEQVRDEVLRFYELLMEVYKDFG 413 Query: 190 LKSIPMRAESGP---IGGD 205 S+ ++ P IG D Sbjct: 414 FDSVTVKLSDRPENRIGSD 432 >gi|163740958|ref|ZP_02148351.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] gi|161385949|gb|EDQ10325.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] Length = 648 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 12/190 (6%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G K + +R Q+R G +E++ P + LW SG +D Y + Sbjct: 260 MQEEAPGQIFWHPNGWKIYTTLQDYMRRMQDRDGYVEVNTPQVVDRKLWEASGHWDKYQE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + D A P + +F +KSYR+LP + R E Sbjct: 320 NMFIVEVDEDHAREKAVNALKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCARYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP--- 201 G+MR R F D + F E S F+++L +++ LG ++ + P Sbjct: 380 LHGIMRVRGFTQDDGHIF--CAEDQIESETAKFIAFLSKVYADLGFHDWTIKLSTRPEKR 437 Query: 202 IGGDLSHEFI 211 IG D S + + Sbjct: 438 IGSDESWDLV 447 >gi|260425980|ref|ZP_05779959.1| threonyl-tRNA synthetase [Citreicella sp. SE45] gi|260420472|gb|EEX13723.1| threonyl-tRNA synthetase [Citreicella sp. SE45] Length = 649 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 91/423 (21%), Positives = 161/423 (38%), Gaps = 68/423 (16%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G W P G ++ +R Q + G +E++ P + + LW ESG +++Y + Sbjct: 260 LQPEAPGQIFWHPNGWTVYTSLQDYMRRMQRKDGYVEVNTPQVVNRKLWEESGHWENYRE 319 Query: 92 EMLRL-----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF +KSYR+LP + R E Sbjct: 320 NMFIVEVDEEGAREKTINALKPMNCPCHVQIFNHGLKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAY---SFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP 201 G+MR R F DA+ +FD E SK F+ +L +I+ LG S ++ + P Sbjct: 380 LHGIMRVRGFTQDDAHIFCTFDQIEEESKK-----FIDFLAKIYADLGFDSWRVKLSTRP 434 Query: 202 ---IGGDLSHEFI--VLADTGETQVFCSKDFMDFPI-PSENTDFD---DIISLNSIVEQW 252 +G + S + + LA+ C +F I P E + + + ++I W Sbjct: 435 EKRVGSEESWDSMEEALANA------CKAAGREFEIFPGEGAFYAPKLEFVLTDAIGRDW 488 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY- 311 +L +LPE + A + G DG+ H Sbjct: 489 QCGTL--------QLDPNLPER-----------------------LDANYVGQDGEKHRP 517 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + + +G+ ++ H GK W +AP ++ + +I + D + A Sbjct: 518 IMLHRAVLGSFERFIGILIEEHSGKLPFW---LAPRQVVVASITSE---ADDYVHEAVAA 571 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G D E+I + L P+ + VG + V + V ++ + SL Sbjct: 572 LRAAGVRAEADVRNEKINYKVREHSLGKVPVILAVGHREVEERTVTVRRLGEKQTQVRSL 631 Query: 432 EEV 434 +E+ Sbjct: 632 DEI 634 >gi|163737374|ref|ZP_02144791.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] gi|161388900|gb|EDQ13252.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] Length = 648 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 12/190 (6%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G K + +R Q+R G +E++ P + LW SG +D Y + Sbjct: 260 MQEEAPGQIFWHPNGWKIYTTLQDYMRRMQDRDGYVEVNTPQVVDRKLWEASGHWDKYQE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + D A P + +F +KSYR+LP + R E Sbjct: 320 NMFIVEVDEDHAREKAVNALKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCARYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP--- 201 G+MR R F D + F E S F+++L +++ LG ++ + P Sbjct: 380 LHGIMRVRGFTQDDGHIF--CAEDQIESETAKFIAFLSKVYADLGFHDWTIKLSTRPEKR 437 Query: 202 IGGDLSHEFI 211 IG D S + + Sbjct: 438 IGSDESWDLV 447 >gi|120437069|ref|YP_862755.1| prolyl-tRNA synthetase [Gramella forsetii KT0803] gi|152112923|sp|A0M4Z3|SYP_GRAFK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|117579219|emb|CAL67688.1| prolyl-tRNA synthetase [Gramella forsetii KT0803] Length = 492 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 7/162 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F +G +V S+G+ + R++ A+I + D G+ Sbjct: 234 GKALQAGTSHFLGQNFAEAFDVKFATKEGGLEHVWATSWGV-STRLMGALIMTHSDDNGL 292 Query: 339 IWPDSVAPFKISLINI----KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFA 393 + P ++AP ++ ++ I + DQ+ A E + L VG V +D+ Q G +FA Sbjct: 293 VLPPNLAPIQVVIVPIYRSEEQLDQISEVANE-LVKELRAVGVSVKFDNNDNQKPGWKFA 351 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G PL++ +G K + VE+ R T +E ++ EV+ Sbjct: 352 QYELQGVPLRLAIGPKDLEKGTVELARRDTLTKEFVNRSEVV 393 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D GK M+ + ++ ++ PT E ++ + +++ I+SYR+LP Q R E+R R Sbjct: 102 DKPGKLMVDPDAKLEEELVVRPTSEAIIWNTYKNWIQSYRDLPIKVNQWANVVRWEMRTR 161 Query: 147 FGVMRSREFLMKDAYSFDLT 166 +R+ EFL ++ ++ T Sbjct: 162 L-FLRTAEFLWQEGHTAHAT 180 >gi|319902090|ref|YP_004161818.1| prolyl-tRNA synthetase [Bacteroides helcogenes P 36-108] gi|319417121|gb|ADV44232.1| prolyl-tRNA synthetase [Bacteroides helcogenes P 36-108] Length = 497 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 84/163 (51%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I + ++ EK I A+L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNAEMLSKIDEKVAGIVAKLKSMGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ G P+++++G + + +S +E+ R T +E S E + Y Sbjct: 355 YEVKGVPVRLVMGGRDLENSTMEVMRRDTLEKETRSCEGIEEY 397 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWINSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|295135607|ref|YP_003586283.1| prolyl-tRNA synthetase [Zunongwangia profunda SM-A87] gi|294983622|gb|ADF54087.1| prolyl-tRNA synthetase [Zunongwangia profunda SM-A87] Length = 492 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 74/358 (20%), Positives = 155/358 (43%), Gaps = 75/358 (20%) Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 ++ GK ++ A + ++ ++ PT E V+ + +++ I+SYR+LP Q R E Sbjct: 102 ENKGKLIVDPAAKLEEELVVRPTSEAVIWNTYKNWIQSYRDLPILINQWANVVRWE---- 157 Query: 147 FGVMRSREFLMKDAYSFDLTPEG-SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 MR+R FL + L EG + H+ + ++ +++ M D Sbjct: 158 ---MRTRLFLRTSEF---LWQEGHTAHATRQEALA----------ETMQM--------ND 193 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPI----PSENTDFDDIISLNSIVEQWTAPYAATSD 261 + EF+ ++FM P+ +EN F A + Sbjct: 194 IYAEFV-------------ENFMATPVIKGAKTENERF-----------------AGAEE 223 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGA 321 + ++L ++ + ++ G + G ++ F +G +V S+G+ + Sbjct: 224 TY---CIEALMQD----GKALQAGTSHFLGQNFAKAFDVKFATKEGGLEHVWATSWGV-S 275 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCD 378 R++ A++ + D KG++ P +AP ++ ++ I K+ +Q+ D + L G Sbjct: 276 TRLMGALVMTHSDDKGLVLPPKLAPIQVVIVPIYKSEEQLDQISDVANGLVKDLRAKGIS 335 Query: 379 VFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 V +D+ + G +FA +L G P+++ +G K + VE+ R T +E + ++ V+ Sbjct: 336 VKFDNRDTHKPGWKFAQYELQGVPVRLAIGPKDIEKGTVELARRDTLTKEFVEMDGVV 393 >gi|227827828|ref|YP_002829608.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.14.25] gi|229585098|ref|YP_002843600.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.27] gi|259511620|sp|C3N6D0|SYP_SULIA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|259511623|sp|C3MW88|SYP_SULIM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|227459624|gb|ACP38310.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.14.25] gi|228020148|gb|ACP55555.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.27] Length = 481 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 12/175 (6%) Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 FD++ + +V +++G + + G +S + + DG Y SYGI R +A+ Sbjct: 215 FDTIMPDGKV----MQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISD-RAIAS 269 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHD-----QVCRDACEKIYARLSKVGCDVFWD 382 VI D G I P SVAP K+ ++ I A + QV + + E I L+K D Sbjct: 270 VIAIHGDDHGPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSVE-ICEMLNKNNITCVTD 328 Query: 383 DMGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+ G +F + ++ G P+++ +G + ++ S V IK R + EEV+N Sbjct: 329 QDTEKTPGEKFYIWEIKGVPIRLEIGPRELASSTVFIKRRDNLKSYTVKKEEVVN 383 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 10/175 (5%) Query: 26 MLRTGMIHQHS----KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +LR G + + KG+ W+P G K N+ +IIR + TG E+ P L DL Sbjct: 19 VLREGEFYDYGRYPVKGMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLS 78 Query: 82 -ESGRYDSYGKEMLRL----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 ES + +E+ + ++ D + PT E +T + +KSY+ LP +YQI Sbjct: 79 RESTHIKGFEEEVFWVTKGGSEDLDVKLALRPTSEVAITTMENLWLKSYKQLPKKYYQIV 138 Query: 137 LKFRDELRPRFGVMRSREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FR E + ++R RE K+A++ T + ++ + Y +IF+ L + Sbjct: 139 SVFRYETKATRPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAI 193 >gi|227892831|ref|ZP_04010636.1| theronyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] gi|227865333|gb|EEJ72754.1| theronyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] Length = 645 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 89/405 (21%), Positives = 160/405 (39%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I + + G + P L + D + SG + Y +M Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVADGYDHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + IF+ HI+SYR+LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALDQVQDEFAKILKLIMDVYKDFDITDYYFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + + D M D + L+ + E A Y D+ + +L + Sbjct: 425 PKNTEKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFGL----TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N +AH + EK+ L+K G DD E++G + Sbjct: 534 KGAFPTW---LAPIQAEIIPVNNEAHGEY----AEKVRQELAKRGFRAEVDDRNEKMGYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G + KV ++ T SL++ I Sbjct: 587 IRESQTQKVPYTLVLGDDEMKSGKVNVRRYGTDEEISKSLDDFIK 631 >gi|291320056|ref|YP_003515314.1| prolyl tRNA synthetase [Mycoplasma agalactiae] gi|290752385|emb|CBH40356.1| Prolyl tRNA synthetase (Proline tRNA ligase) [Mycoplasma agalactiae] Length = 478 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 3/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y +S +FK +D +V S+G+ + R++ A+I + D +GI Sbjct: 221 GKALQAGTSHYLAQNFSKKFEISFKNDKNEDEFVYQTSWGV-STRLLGAIIMTHGDNRGI 279 Query: 339 IWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I P VAP ++ ++ + A+ Q D C ++ +L + V D + G + + +++ Sbjct: 280 IIPPKVAPVQVDILELFANKQPKVHDFCNELAKQLER-KFRVRLDSTDKSPGYKASNSEI 338 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ VG K + + V I R T + +S+ +V Sbjct: 339 QGVPLRIEVGPKDLENKTVTIVRRDTLEKTMVSVSDV 375 >gi|206603264|gb|EDZ39744.1| Threonyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG'] Length = 617 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 85/403 (21%), Positives = 159/403 (39%), Gaps = 44/403 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ WLP G + + + + +R G + P + DLW++SG +D Y Sbjct: 228 LDEKGAGLVLWLPKGSQIRRTLEELWKILHDRHGYRYVYTPHIARLDLWMQSGHWDYYQD 287 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M R + A P + IFR ++SYR+LP ++ +R E G+M Sbjct: 288 SMFRPMETEGTAYELKPMNCPFHILIFRESVQSYRDLPIRLSELGTVYRYERSGTLHGLM 347 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F PE + ++ R G + + P +G D + Sbjct: 348 RVRGFTQDDAHIF-CKPEDLAGEIRNVLALVDQMIGRFGFTDRTVYLSTRPEKSVGSDEN 406 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E TG + K + IP E + + Y D+ K Sbjct: 407 WEMA----TGSLR----KALEESGIPYEVDPGEGVF------------YGPKIDI---KF 443 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVA 326 D++ ++S ++ F K+ L T++ G+ M + G++ Sbjct: 444 HDAIGRAWQLSTIQVD----FNLPEKFDL----TYRNDSGEPCRPIMIHRALFGSIERFF 495 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ + G +W +AP ++ ++ I A + + + +RL G D E Sbjct: 496 GILIEHYAGAFPLW---LAPEQVRIMTI-ADRHI--PYAQTVLSRLKDRGVRAEGDFRNE 549 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +IG + A + P +VG + V +++V ++ R G ++D+ Sbjct: 550 KIGFKVREAQMEKIPEMWVVGDREVEETRVSVRSR-EGEKKDL 591 >gi|182679322|ref|YP_001833468.1| threonyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|182635205|gb|ACB95979.1| threonyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 644 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 5/177 (2%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + G W P G + + +R Q G +E++ P + LW SG + +Y + Sbjct: 257 QEEGPGTVFWHPKGWTLFQTLISYMRRRQQEAGYVEVNTPQVLDRALWETSGHWSTYREN 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +++ P + IF++ +KSYR+LP + + R E GVMR Sbjct: 317 MFITTTEDERVFALKPMNCPGHVQIFKNGLKSYRDLPLKIAEFGVVHRYEPSGALHGVMR 376 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R F DA+ F T + K+ L I+ G + I ++ + P +G D Sbjct: 377 VRAFTQDDAHIF-CTEDQIMDEVLKINDLILSIYRDFGFEDIVIKLSTRPEKRVGSD 432 >gi|15807075|ref|NP_295804.1| threonyl-tRNA synthetase [Deinococcus radiodurans R1] gi|22654147|sp|Q9RSP3|SYT_DEIRA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|6459875|gb|AAF11630.1|AE002044_3 threonyl-tRNA synthetase [Deinococcus radiodurans R1] Length = 649 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 82/395 (20%), Positives = 151/395 (38%), Gaps = 48/395 (12%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + ++E+Q + G + P + + DL+ SG Y Y + Sbjct: 266 GKGLPLWLPNGTVLREELTNFMKEQQFQRGYQGVVTPNIGNLDLYRTSGHYPYYSESQFN 325 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +++ + P + I+ S +SYR+LP + +R E G+ R R Sbjct: 326 PIQVDEEEYMLKPMNCPHHVRIYASKPRSYRDLPVRLAEFGTVYRYEQSGELNGLTRVRG 385 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA-----ESGPIGGDLSHE 209 F DA+ F P+ K + + + + G+ + R ES GD + Sbjct: 386 FTQDDAHIF-CRPDQLKREFLDVLDLTVLVLKTFGMTDVRFRVGVRDPESDKYVGDEQNW 444 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + E Q+ + + + P E D A Y D Sbjct: 445 ALA-----ERQIIEAVEEVGLPYTIEPGD--------------AAFYGPKLDF------- 478 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVA 326 K V R ++G I Y+LP ++ G DG++H + + G++ Sbjct: 479 ---VVKDVLGREWQLGTI---QVDYNLPERFDISYTGEDGQEHRPIMIHRAPFGSIERFT 532 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ + G +W +AP ++ +I I E++ L + G DD Sbjct: 533 GILIEHYAGDFPLW---LAPRQVMIIPIADRHNAY---AEELREELHRAGLRAEVDDSSN 586 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ ++ A+L P+ +IVG K +V ++ R Sbjct: 587 RMQAKVRDAELHKIPVMLIVGDKEQEAREVSVRER 621 >gi|71898248|ref|ZP_00680422.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1] gi|71731987|gb|EAO34044.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1] Length = 635 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 85/422 (20%), Positives = 156/422 (36%), Gaps = 48/422 (11%) Query: 16 RDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 +DAE H+ + + + + G+ W P G + IR +G E+ P Sbjct: 238 QDAEKRDHRKIGKAQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCP 297 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + LW +SG +D+Y KE + D + P + +F + SYR+LP + Sbjct: 298 QILDVSLWQKSGHWDNY-KENMFFTDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRY 356 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + R+E G++R R F D + F T + L+++ G + Sbjct: 357 GEFGACHRNEPSGALHGLLRVRGFTQDDGHIF-CTEAQIEAEVTAFHRQALQVYADFGFE 415 Query: 192 SIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 +I ++ P +G LS + A C ++ + P Sbjct: 416 NIQIKIALRPDKRLGDSLSWDKAEAALRSALSA-CEVEWQELPGEG-------------- 460 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y + H L D++ ++ ++ G +Y S + Sbjct: 461 -----AFYGPKIEYH---LKDAIGRTWQLGTIQVDFMMPGRLGAEYVDERSQ-------R 505 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H V + +G+M ++ + G IWP +AP ++ + NI + E++ Sbjct: 506 RHPVMLHRAIVGSMERFIGILIEHYAG---IWPTWLAPVQVVIANIT---DAQYEYAEQV 559 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 + L G V D E+IG + L P ++VG + + V ++ T RED Sbjct: 560 HKALLNQGFRVNIDLRNEKIGYKIREHTLQRVPYLLVVGDREKENGTVAVR---TCSRED 616 Query: 429 MS 430 + Sbjct: 617 LG 618 >gi|110005463|emb|CAK99785.1| prolyl-trna synthetase protein [Spiroplasma citri] Length = 474 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 3/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YFG +S F Y S+G+ + R++ +I + D G+ Sbjct: 222 GQALQCGTSHYFGQNFSKAFDIKFANQKNTLEYAYSTSWGV-STRLIGGIIMTHSDDNGL 280 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP +I ++ I A +++ +L K C++ D G G + A++ Sbjct: 281 VLPPQIAPIQIMILPINNDSNEQLSAAQQLQKKLQKYRCEIDQSDKG--FGFRATNAEIK 338 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ +G + ++ +V I R T + +S EV Sbjct: 339 GIPLRIEIGPRDLAQQQVTIARRDTFEKITVSWAEV 374 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG + P G + +N+ I+ E + G + P L L+ E + + E+ Sbjct: 35 KGTTIFKPYGYEIWENIQKILDAEFKKNGVKNVYFPLLIPKTLFNKEKEHIEGFSPEIAT 94 Query: 96 LADRNDKAM---IY-GPTHEEVMTDIFRSHIKSYRNLPFTFYQI--QLKFRDELRPRFGV 149 + DK + +Y PT E + F I+ YR+LP + Q L++ RP Sbjct: 95 VTKVGDKVLDEELYIRPTSEVLFGTFFSKEIQGYRDLPLLYNQWVNVLRWEKTTRP---F 151 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 +R+ EFL ++ + T SK + + L I+ K++ Sbjct: 152 LRTSEFLWQEGH----TIHSSKQEAQQFTLKILDIYATFAEKTL 191 >gi|258543038|ref|YP_003188471.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256634116|dbj|BAI00092.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256637176|dbj|BAI03145.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03] gi|256640228|dbj|BAI06190.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07] gi|256643285|dbj|BAI09240.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22] gi|256646340|dbj|BAI12288.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26] gi|256649393|dbj|BAI15334.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32] gi|256652379|dbj|BAI18313.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655437|dbj|BAI21364.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12] Length = 645 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 90/433 (20%), Positives = 167/433 (38%), Gaps = 57/433 (13%) Query: 17 DAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + + G+ H + + G W G + + +R Q R G E+ P Sbjct: 240 EAEKRDHRRIGKEMGLFHFQEEAVGQVFWHAKGWRLYTALQDYMRRAQTRHGYQEVRTPQ 299 Query: 74 LQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 L LW SG +D Y M + + +K + P + IFR ++SYR LP Sbjct: 300 LVDRALWEASGHWDKYRHHMFIATVEDENKTLALKPMNCPCHVQIFRHGLRSYRELPLRM 359 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGL 190 + R E G+MR R F DA+ F E FV L ++ LG Sbjct: 360 AEFGACHRYEPSGALHGLMRVRGFTQDDAHIF--CTEDQIADETVRFVKMLHDVYQDLGF 417 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP-IPSENTDFD---DIISLN 246 + + ++ P S E A+ + C+ +++ P E + + + + Sbjct: 418 EHVRVKFADRPEQRAGSDEVWDKAENALKEA-CTVAGVEYEHNPGEGAFYGPKLEFVLRD 476 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 +I W V LPE + A++ G D Sbjct: 477 AIGRDWQCGTLQVDLV--------LPER-----------------------LDASYIGED 505 Query: 307 -GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA- 364 G+ V + +G+ ++ H G+ +W +AP ++ + +I + DA Sbjct: 506 SGRHRPVMLHRAILGSFERFLGILIEQHAGRFPLW---LAPVQVVVASIVS------DAA 556 Query: 365 --CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E++ A L + G V D ++I ++ + P+ ++VG + + V ++ Sbjct: 557 PYAEEVAAALREAGLAVEADVRNDKINAKVREHSVARVPVILVVGRREAEERTVAMRRLG 616 Query: 423 TGIREDMSLEEVI 435 T ++E +SL++ + Sbjct: 617 TQVQETLSLDDAV 629 >gi|189465935|ref|ZP_03014720.1| hypothetical protein BACINT_02298 [Bacteroides intestinalis DSM 17393] gi|189434199|gb|EDV03184.1| hypothetical protein BACINT_02298 [Bacteroides intestinalis DSM 17393] Length = 497 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 85/163 (52%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I + ++ + EK I A+L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNAEMLQKIDEKVAGIVAKLKSMGVSVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++++G + + ++ +E+ R T +E S + + Y Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETRSCDGIEEY 397 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ I SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEELIIRPTSETIIWNTYKNWINSYRDLPILCNQWANVMRWEMRTRL-FLRTAEFLWQEG 176 Query: 161 YSFDLT 166 ++ T Sbjct: 177 HTAHAT 182 >gi|228997455|ref|ZP_04157073.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|229005099|ref|ZP_04162823.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228756201|gb|EEM05522.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228762288|gb|EEM11216.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17] Length = 641 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + + +RE Q E+ P + + LW ESG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIVRNELESFLREIQQNYDYQEVRTPIMMNQGLWEESGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D Y K+ + ++ ++K+ P + IF++ + SYR+LP + R E Sbjct: 314 DHY-KDNMYFSEVDNKSFALKPMNCPGHMLIFKNKLHSYRDLPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|330752678|emb|CBL88143.1| prolyl-tRNA synthetase [uncultured Cytophagia bacterium] Length = 491 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 5/149 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ + F +GK+ V S+G+ + R++ A+I + D G+ Sbjct: 233 GKALQAGTSHFLGQNFAKAFNVKFTNKEGKEDLVWGTSWGV-STRLMGALIMAHSDDDGL 291 Query: 339 IWPDSVAPFKISLINI-KAHDQVCRDA--CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P ++AP ++ +I I K +Q+ R A EKI L G V +D + G +FA Sbjct: 292 VLPPNLAPIQVVIIPIYKGEEQLERIALKVEKIRNSLISKGISVKFDRRDTHKPGWKFAE 351 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +L G PL++ +G K + + +EI R T Sbjct: 352 YELKGVPLRIAIGPKDLDNGTLEIARRDT 380 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 2/98 (2%) Query: 85 RYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDEL 143 + D GKE++ D + + +I PT E V+ D +++ I+SYR+LP Q R E+ Sbjct: 98 KNDENGKELIVDPDAKLEDELIVRPTSETVIWDTYKNWIQSYRDLPLLINQWANVIRWEM 157 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 R R +R+ EFL ++ ++ T E + +M Y Sbjct: 158 RTRL-FLRTTEFLWQEGHTAHATQEEAILETQQMLEVY 194 >gi|322382352|ref|ZP_08056259.1| prolyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153705|gb|EFX46080.1| prolyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 481 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 9/163 (5%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GT ++ F + + +V S+G+ + R++ A+I + D +G+ Sbjct: 225 GKAVQAGTSHYLGTNFAEAFDIKFLNRENQHEFVHTTSWGV-STRLIGAMIMAHGDDRGL 283 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 + P VAP ++ +I I K DQV E + + K G V D + G +F Sbjct: 284 VMPPKVAPTQVIMIPIGPAKTRDQVLAKTYE-LQTEIKKAGFRVRVDAREQSPGWKFNEY 342 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEV 434 ++ G P++V +G + + + +V + R+TG + +D +EE+ Sbjct: 343 EMRGVPVRVELGPRDMENGQVILVSRVTGEKKVVAQDNLVEEI 385 >gi|251777990|ref|ZP_04820910.1| threonine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082305|gb|EES48195.1| threonine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 643 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 87/391 (22%), Positives = 150/391 (38%), Gaps = 38/391 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G K + + I +E+ R G + P + +DL+ SG +D Y M L Sbjct: 259 QGLPLLMPKGAKIVQTLQRWIEDEEERRGYVLTKTPLMAKSDLYKISGHWDHYKDGMFVL 318 Query: 97 ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D ++ P I+ + SYR+LP + + FR+E G++R R Sbjct: 319 GDEEKDEEVFALRPMTCPFQYTIYNAEQHSYRDLPIRYGETSTLFRNESSGEMHGLIRVR 378 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 +F + D + +TPE + + + I LG I D+S+ F Sbjct: 379 QFTLADGHLI-VTPEQLEEEFKGVLELIKYIMKTLG------------IDEDISYRFSKW 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD---VHNEKLFDS 270 D T+ + + P D ++ +I++ Y D + KL D Sbjct: 426 -DPNNTEKYIND-------PDAWNKTQD--TMRTILDHLKIDYVEADDEAAFYGPKL-DL 474 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +N I I F MS K + K Y+ S IG A++ Sbjct: 475 QFKNVHGKEDTIITLQI-DFALAERFDMSYIDKNGEKKRPYIIHRS-SIGCYERTLAMLI 532 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W ++P ++ ++ I D E + L G + D E+IG Sbjct: 533 EKYAGAFPTW---LSPVQVKVLPISDK---YNDYAESVVKSLRNKGVRIEADYRAEKIGY 586 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + A L P ++VG K ++S+V ++ R Sbjct: 587 KIREARLERTPYILVVGEKEAANSEVSVRSR 617 >gi|330834508|ref|YP_004409236.1| threonyl-tRNA synthetase [Metallosphaera cuprina Ar-4] gi|329566647|gb|AEB94752.1| threonyl-tRNA synthetase [Metallosphaera cuprina Ar-4] Length = 562 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 93/396 (23%), Positives = 157/396 (39%), Gaps = 56/396 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P GQ + + + +RE + G E+ + LW SG YD+Y +ML + Sbjct: 176 GLVLFHPKGQLIRNEMISYMREINSSMGYQEVYTSHVFRTVLWKISGHYDTYRDKML-IF 234 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFL 156 +++D + P + I++S ++SYR+LP F + +R E + +G++R+R F Sbjct: 235 NKDDDELGIKPMNCPAHILIYKSRVRSYRDLPLRFSEFGNVYRWEKKGELYGLLRTRGFT 294 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE-----SGPIGGDLSHE-- 209 D + F L + + + L + ++ G + +R IG D E Sbjct: 295 QDDGHIF-LREDQIRDEVKTLINKTLEVLNKFGFRGDDVRINLSTRPDESIGSDEQWEKA 353 Query: 210 ----FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 VL + G TQ + F P DFD SLN +W D + Sbjct: 354 TNSLLNVLKELG-TQFIIKEKEGAFYGPK--IDFDIRDSLN----RWWQLSTIQVDFN-- 404 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 LPE F +Y G+ + + YG R++ Sbjct: 405 -----LPER---------------FKLEY-----VDEDGSKKRPVMIHRAIYG-SLDRMI 438 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A ++E G+ W ++P ++ ++ I +Q + KI L + G D G Sbjct: 439 AILLEHFR-GRLPAW---LSPVQVRILPISEENQ---EYANKILVMLRENGIRGELDPSG 491 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E + + A G P VIVG K + KV I+ R Sbjct: 492 ETLSKRIKRAYDEGVPYLVIVGRKEALEEKVTIRSR 527 >gi|15837338|ref|NP_298026.1| threonyl-tRNA synthetase [Xylella fastidiosa 9a5c] gi|22654146|sp|Q9PFE2|SYT_XYLFA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|9105624|gb|AAF83546.1|AE003915_11 threonyl-tRNA synthetase [Xylella fastidiosa 9a5c] Length = 635 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 92/434 (21%), Positives = 151/434 (34%), Gaps = 72/434 (16%) Query: 16 RDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 +DAE H+ + + + + G+ W P G + IR +G E+ P Sbjct: 238 QDAEKRDHRKIGKVQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCP 297 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + LW +SG +D+Y KE + D + P + +F + SYR+LP + Sbjct: 298 QILDVSLWQKSGHWDNY-KENMFFTDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRY 356 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + R+E G++R R F D + F S + FHR L Sbjct: 357 GEFGACHRNEPSGALHGLLRVRGFTQDDGHIF---------CTEAQIESEVTAFHRQAL- 406 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP---SENTDFDDIISLNSI 248 QV+ F D I + D +S + Sbjct: 407 ----------------------------QVYADFGFEDIQIKIALRPDKRLGDSLSWDKA 438 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE------VGHIFYFGTKYSLPMSATF 302 A +A E + LP IE +G + GT M Sbjct: 439 EAALRAALSAC-----EVEWQELPGEGAFYGPKIEYHLKDAIGRTWQLGTIQVDFMMPGR 493 Query: 303 KGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 GA+ D H V + +G+M ++ + G IWP +AP ++ + NI Sbjct: 494 LGAEYVDERSQRCHPVMLHRAIVGSMERFIGILIEHYAG---IWPTWLAPVQVVVANIT- 549 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + E+++ L G V D E+IG + L P ++VG + + V Sbjct: 550 --DAQYEYAERVHKALLNQGFRVNTDLRNEKIGYKIREHTLQRVPYLLVVGDREKENGTV 607 Query: 417 EIKHRLTGIREDMS 430 ++ T RED+ Sbjct: 608 AVR---TCSREDLG 618 >gi|119357673|ref|YP_912317.1| prolyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] gi|152016595|sp|A1BHL6|SYP_CHLPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119355022|gb|ABL65893.1| prolyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] Length = 481 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 7/162 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++ ++ G G ++ F+ DGK YV S+G+ + R++ A+I + D +G+ Sbjct: 219 SKALQAGTSHNLGQNFAKAFDCQFQTRDGKLDYVWATSWGV-STRLIGALIMAHSDDRGL 277 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYA---RLSKVGCDVFWDDMGEQI-GSQFAV 394 + P +A ++ +I I D+ CEK +A LS G F DD + G +FA Sbjct: 278 VLPPKLATRQVVIIPILKGDKAA--VCEKAHAISRTLSANGIPAFVDDSEQNSPGWKFAE 335 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +L G PL++ +G + + + + R T + +++L++ ++ Sbjct: 336 YELQGIPLRIELGPRDIQNGTCIVARRDTLEKTELALDDTLS 377 Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ I+SYR+LP Q R E+R R +R+ EFL ++ ++ TP Sbjct: 108 PTSETIIWSSYKKWIQSYRDLPILINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHATP 166 Query: 168 EGSKHSYNKMFVSY 181 E S+ +M Y Sbjct: 167 EESQEEVVRMINVY 180 >gi|302335586|ref|YP_003800793.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Olsenella uli DSM 7084] gi|301319426|gb|ADK67913.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Olsenella uli DSM 7084] Length = 588 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ + G WLP G + + + +E Q+R G ++ P + S LW SG +D Y Sbjct: 207 MMSEAGPGFPFWLPNGMRVRNALMDYWQEMQDRFGYEQVQTPIILSRTLWETSGHWDHY- 265 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 K+ + +D+ P + +++S +SYR+LP + L R EL+ G+ Sbjct: 266 KDNMYTTQIDDEDFAIKPMNCPGACLVYKSKPRSYRDLPLKLAEAGLDHRHELKGALHGL 325 Query: 150 MRSREFLMKDAYSF 163 R REF DA+ F Sbjct: 326 FRVREFTQDDAHLF 339 >gi|166032032|ref|ZP_02234861.1| hypothetical protein DORFOR_01734 [Dorea formicigenerans ATCC 27755] gi|166028485|gb|EDR47242.1| hypothetical protein DORFOR_01734 [Dorea formicigenerans ATCC 27755] Length = 643 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 100/438 (22%), Positives = 171/438 (39%), Gaps = 54/438 (12%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L M+ + G +LP G + + RE + G Sbjct: 230 YLTMLEEAKKRDHRKLGKELGLF--MMCEEGPGFPFFLPKGMVLKNTLLDYWRELHKKAG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKS 124 +E+S P + S LW SG +D Y + M D D A+ P + ++++ +S Sbjct: 288 YVEVSTPIILSRHLWETSGHWDHYKENMYTTQIDGEDYAI--KPMNCPGGMLVYKAEPRS 345 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y++LP ++ L R E + G+MR R F DA+ F + PE + + Sbjct: 346 YKDLPLRVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIF-MMPEQIRDEIKGVVALIDE 404 Query: 184 IFHRLGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G K + R E+ +G D E LA G Sbjct: 405 VYSLFGFKYHVELSTRPENS-MGTDEDWE---LATEGLRGALND---------------- 444 Query: 241 DIISLNSIVEQWT-APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + L+ +V + A Y D H L DS+ + +++ F +Y+ Sbjct: 445 --LGLDYVVNEGDGAFYGPKIDFH---LTDSIGRTWQCGTIQLDMQLPQRFELEYT---- 495 Query: 300 ATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 GADG+ H + + G++ R + +IE +P +AP ++ ++ I Sbjct: 496 ----GADGEKHRPIMIHRVAFGSIERFIGILIEHFAGA----FPTWLAPVQVKVLPISDK 547 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D K+ L+ G D E+IG + A + P ++VG K V Sbjct: 548 ---YMDYANKVLDELNAAGVRAEVDSRAEKIGYKIREAQMQKIPYMLVVGEKEQEADLVS 604 Query: 418 IKHRLTGIREDMSLEEVI 435 ++ R G +LE I Sbjct: 605 VRSRFAGDEGQKNLETFI 622 >gi|149182619|ref|ZP_01861089.1| prolyl-tRNA synthetase [Bacillus sp. SG-1] gi|148849697|gb|EDL63877.1| prolyl-tRNA synthetase [Bacillus sp. SG-1] Length = 476 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/334 (20%), Positives = 130/334 (38%), Gaps = 72/334 (21%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + + +++ I SYR+LP + Q +++ RP +R+ EFL ++ ++ Sbjct: 112 PTSEVLFGEHYKNIIHSYRDLPKLYNQWANVVRWEKTTRP---FLRTLEFLWQEGHTCHE 168 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 T E + KM Y + + +IP ++ E + F Sbjct: 169 TDEEAHEETVKMLEVYAELCE--NILAIP----------------VIKGQKTEKEKFAGA 210 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 + Y S +H+ K S G Sbjct: 211 KYT---------------------------YTIESLMHDGKALQS--------------G 229 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 + G ++ F +G YVQ S+G R++ A+I D +G++ P A Sbjct: 230 TSHHLGDGFAKAFGIQFSDREGNLQYVQQTSWGF-TTRIIGAMIMVHGDDRGLVIPPKAA 288 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLS---KVGCDVFWDDMGEQIGSQFAVADLLGFPL 402 P ++ ++ I H + D + RL+ +VG D ++ G +F ++ G PL Sbjct: 289 PTQLMIVPIAQHKEGVLDFAYNLKERLAGSFRVGIDA----SDKKPGWKFNEYEMKGIPL 344 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 ++ G + + +++V I R TG + + L+E+ N Sbjct: 345 RLEAGPRDIENNQVVIARRDTGDKVTVGLDELEN 378 >gi|160900048|ref|YP_001565630.1| threonyl-tRNA synthetase [Delftia acidovorans SPH-1] gi|238687213|sp|A9C3D4|SYT_DELAS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160365632|gb|ABX37245.1| threonyl-tRNA synthetase [Delftia acidovorans SPH-1] Length = 643 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 89/388 (22%), Positives = 145/388 (37%), Gaps = 50/388 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I +HS G W P G V +R G E+ P + LW ++G +D Y + Sbjct: 259 IDEHSPGTVFWHPKGWSLWQEVEQYMRRVYRDNGYQEVKGPQILDKTLWEKTGHWDKYRE 318 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M +++ D A+ P + IF+ IKSYR+LP + + R+E G+ Sbjct: 319 NMFTTESEKRDYAL--KPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHGI 376 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGD 205 MR R F D + F E F + L +++ G I + + P IG D Sbjct: 377 MRVRGFTQDDGHVF--CTEDQIQPEVLAFTTLLQKVYADFGFSDIIYKVATRPEARIGSD 434 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 S D E + S E + + +IS + Sbjct: 435 ESW------DKAEAALINS---------LEASGCEYVIS------------PGDGAFYGP 467 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAM 322 K+ +L K R + G I +S+P + A + G DG H V + +G++ Sbjct: 468 KIEYTL---KDAIGRQWQCGTI---QVDFSMPERLDAEYVGEDGDRHRPVMLHRAIVGSL 521 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFW 381 ++ H G W +AP + +++NI A R+ +K+ G V Sbjct: 522 ERFIGILIEQHAGAMPTW---LAPVQAAVLNITDAQADYVREVAQKLQKAFPNQGLRVAT 578 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSK 409 D E+I + L P ++ G K Sbjct: 579 DLRNEKITYKIREHSLQKLPYILVAGDK 606 >gi|53805116|ref|YP_113204.1| threonyl-tRNA synthetase [Methylococcus capsulatus str. Bath] gi|73919805|sp|Q60AZ3|SYT_METCA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|53758877|gb|AAU93168.1| threonyl-tRNA synthetase [Methylococcus capsulatus str. Bath] Length = 638 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 81/394 (20%), Positives = 141/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R G E+ P + + LW SG ++ + Sbjct: 255 MQEEAPGMVFWHPKGWILWQEIEQYMRRVFRDNGYQEIRTPLVVARTLWERSGHWEKFSD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 EM A I P + ++ +KSYR+LP + R+EL G+M Sbjct: 315 EMFTTASEERDYAI-KPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRNELSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + ++ +++ G + ++ + P S E Sbjct: 374 RVRGFTQDDAHIF-CTEEQIQDEVSRFIDLLFKVYADFGFSEVQIKLSTRPEKRVGSDEV 432 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ +K P E + I + L D Sbjct: 433 WDKAEHALETALNAKGLAWDLQPGEGAFYGPKIEFS--------------------LKDC 472 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 L R + G I +S+P + AT+ DG H M I G++ Sbjct: 473 LD-------RVWQCGTI---QVDFSMPDRLGATYVAEDGARHVPVMLHRAILGSLERFVG 522 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G+ +W +AP + ++NI D ++ G V D E+ Sbjct: 523 ILTEHYAGQYPLW---LAPVQAVVLNITDRQA---DYAREVAQEFVSKGFRVIADLRNEK 576 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +G + + P +IVG K V V ++ R Sbjct: 577 VGFKIREHSMQRVPYLLIVGDKEVEAGSVSLRTR 610 >gi|57867165|ref|YP_188820.1| threonyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|251811076|ref|ZP_04825549.1| threonyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|282875897|ref|ZP_06284764.1| threonine--tRNA ligase [Staphylococcus epidermidis SK135] gi|71153576|sp|Q5HNM1|SYT_STAEQ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|57637823|gb|AAW54611.1| threonyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|251805411|gb|EES58068.1| threonyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|281294922|gb|EFA87449.1| threonine--tRNA ligase [Staphylococcus epidermidis SK135] Length = 645 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 91/407 (22%), Positives = 168/407 (41%), Gaps = 45/407 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML-RL 96 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M + Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAM 321 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D+AM+ P + I+++ SYR LP ++ R E G+ R R Sbjct: 322 KLDEDEAMVLRPMNCPHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIQDVYKDFGFEDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLN---SIVEQWTAPYAATSDVHNEKLFDSLP 272 + + D M S + D + L +I E A Y DV ++ ++ Sbjct: 427 PEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAIGE--AAFYGPKLDV---QVKTAMG 481 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIE 330 + + +S ++ F ++ L T+ G DG+ H + G+ + R VA + E Sbjct: 482 KEETLSTAQLD----FLLPERFDL----TYIGQDGEQHRPVVIHRGVVSTMERFVAFLTE 533 Query: 331 SSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + KG +P +AP ++ +I NI H D + L G V DD E++ Sbjct: 534 ET---KG-AFPTWLAPMQVEIIPVNIDLH----YDYARLLQDELKSQGVRVEIDDRNEKM 585 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + A + P Q++VG + V + +V ++ + +E + +E I Sbjct: 586 GYKIREAQMKKIPYQIVVGDQEVENQEVNVRKYGSEKQESVEKDEFI 632 >gi|325120065|emb|CBZ55617.1| hypothetical protein NCLIV_060420 [Neospora caninum Liverpool] Length = 781 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 58/129 (44%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G K + + A +REE G E+ P + S DLW SG Y +Y KE + Sbjct: 351 SPGSCFWLPDGAKVYNKLCAFMREEYRFRGFQEVISPNIFSCDLWKMSGHYQNY-KENMY 409 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L D K P + +F+ SYR LP + R+EL G+ R R Sbjct: 410 LFDVEGKEWGLKPMNCPGHCIMFKHLAPSYRQLPLRLADFGVLHRNELSGSLTGLTRVRR 469 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 470 FQQDDAHIF 478 >gi|228994292|ref|ZP_04154183.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|228765442|gb|EEM14105.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 641 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + + +RE Q E+ P + + LW ESG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIVRNELESFLREIQQNYDYQEVRTPIMMNQGLWEESGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D Y K+ + ++ ++K+ P + IF++ + SYR+LP + R E Sbjct: 314 DHY-KDNMYFSEVDNKSFALKPMNCPGHMLIFKNKLHSYRDLPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|94985607|ref|YP_604971.1| threonyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] gi|123079875|sp|Q1IY82|SYT_DEIGD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|94555888|gb|ABF45802.1| threonyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] Length = 649 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 82/391 (20%), Positives = 146/391 (37%), Gaps = 40/391 (10%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + +RE+Q + + P + + DL+ SG Y Y Sbjct: 266 GKGLPMWLPNGTVLREELTRFLREQQFQRDYQGVVTPNIGNLDLFRTSGHYPYYSDSQFE 325 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +++ + P + I+ S +SYR+LP + +R E+ G+ R R Sbjct: 326 PLSVDEEQYMLKPMNCPFHIRIYASKPRSYRDLPVRLAEFGTVYRYEMSGELNGLTRVRG 385 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F P+ K + + + + G+ + R D Sbjct: 386 FTQDDAHIF-ARPDQLKKEFLDVLDLTVLVLKTFGMNDVRFRVGVRDPASDKYVGDPAQW 444 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + E Q+ + + + P E D A Y D Sbjct: 445 EVAERQIIEAVEEVGLPYTVEPGD--------------AAFYGPKLDF----------VV 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIES 331 K V R ++G I Y+LP T+ G DG++H V + G++ ++ Sbjct: 481 KDVLGREWQLGTI---QVDYNLPERFDLTYTGEDGQEHRPVMIHRAPFGSLERFVGILIE 537 Query: 332 SHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP +I LI I H+ + + A G DD ++ + Sbjct: 538 HYGGDFPFW---LAPRQIMLIPIADRHNAYAQTLANEFKA----AGLRAEVDDSNNRMNA 590 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + A+L P+ +IVG + + +V ++ R Sbjct: 591 KVRNAELHKIPVMLIVGDQEEARREVSVRER 621 >gi|296110087|ref|YP_003617036.1| prolyl-tRNA synthetase [Methanocaldococcus infernus ME] gi|295434901|gb|ADG14072.1| prolyl-tRNA synthetase [Methanocaldococcus infernus ME] Length = 451 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 83/411 (20%), Positives = 155/411 (37%), Gaps = 74/411 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLR 95 KG +LP G K I+ + + +G ++ P L L + G + + E+ Sbjct: 24 KGCGVYLPYGFKIRKYTFEILSKLLDESGHEQVLFPLLIPETLLAKEGEHIKGFEDEVYW 83 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D + PT E + + + +K + +LP YQI FR E + ++R Sbjct: 84 VTHGGKTPLDVKLALRPTSETAIYYMLKLWVKVHTDLPIKLYQIVNTFRYETKHTRPLIR 143 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RE + K+A++ T E ++ + Y + F LG+ + Sbjct: 144 LREIMTFKEAHTAHATKEEAEKQVKEAIGIYKKFFDTLGIPYL----------------- 186 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 + ++ FP FD I ++ T VHN Sbjct: 187 ----------IIKRPEWDKFPGADYTIAFDTIFPDGRAIQIGT--------VHN------ 222 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 G +S F+ G Y YGI R +A++I Sbjct: 223 -------------------LGQHFSKTFEIEFETPTGDKDYAYQTCYGISD-RAIASIIA 262 Query: 331 SSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 D KG+ P VAP ++ +I + K +++ + +++ RL + + DD + Sbjct: 263 IHGDEKGLKLPPVVAPIQVVIIPLIFKGKEEMVINKAKEVAERLKEYRVHI--DDRDIRP 320 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG---IREDMSLEEVIN 436 G ++ ++ G PL++ +G + + + K+ + R TG + E+ LEE + Sbjct: 321 GKKYYDWEIKGVPLRIDIGPRDIEEGKITLVRRDTGEKIVIEESELEEKVR 371 >gi|148377386|ref|YP_001256262.1| prolyl-tRNA synthetase [Mycoplasma agalactiae PG2] gi|148291432|emb|CAL58817.1| Prolyl tRNA synthetase (Proline tRNA ligase) [Mycoplasma agalactiae PG2] Length = 478 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 10/172 (5%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y +S +FK +D +V S+G+ + R++ A+I + D +GI Sbjct: 221 GKALQAGTSHYLAQNFSKRFEISFKNDKNEDEFVYQTSWGV-STRLLGAIIMTHGDNRGI 279 Query: 339 IWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I P VAP ++ ++ + A+ Q D C ++ +L + V D + G + + +++ Sbjct: 280 IIPPKVAPVQVDILELFANKQPKVHDFCNELAKQLER-KFRVRLDSTDKSPGYKASNSEI 338 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 G PL++ VG K + + V I +R D +LE+ I S+ S R +L Sbjct: 339 QGVPLRIEVGPKDLENKTVTI------VRRD-TLEKTIVSVSYVKSKVRELL 383 >gi|320536876|ref|ZP_08036869.1| threonyl-tRNA synthetase [Treponema phagedenis F0421] gi|320146259|gb|EFW37882.1| threonyl-tRNA synthetase [Treponema phagedenis F0421] Length = 583 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 102/460 (22%), Positives = 182/460 (39%), Gaps = 70/460 (15%) Query: 5 KYFLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+ DAE H+ + ++ G+ H + + G W P G V +RE+ Sbjct: 170 KEYLAMLE----DAEKRDHRKLGKSFGLFHLDEENPGQIFWHPNGWALYLLVQNYVREKI 225 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G +E+ P + LW SG + Y + M + + + P + +IF+ Sbjct: 226 KADGYLEVKTPFVMPQSLWERSGHWAKYRENMF-ITESEKRLFALKPMNCPGHIEIFKQG 284 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR+LP + R+E G++R R F+ DA+ F E S K F + Sbjct: 285 IKSYRDLPLRLAEFGSCTRNEPSGSLHGILRVRGFVQDDAHIF--CTEAQISSEVKKFCA 342 Query: 181 YLR-IFHRLGLK--SIPMRAESGP---IGGDLSHEFI--VLADTGETQVFCSKDFMDFPI 232 L+ ++ G SI ++ + P +G D + + LAD C +++ Sbjct: 343 LLKNMYADFGFAEDSILVKFSTRPEKRVGDDATWDRAEKALADA------CKDAGLEY-- 394 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + E A Y + L DSL R + G I Sbjct: 395 --------------EVAEGEGAFYGPKLEF---TLIDSL-------GREWQCGTI---QV 427 Query: 293 KYSLP----MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 Y LP ++A + G D + H V + +G++ ++ + G +P ++P Sbjct: 428 DYQLPSKERLNAEYIGEDNQKHNPVMLHRAALGSLERFIGILIEHYAG---AFPPWLSPL 484 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + +I + D EK L+ G V D +++ ++ P Q+IVG Sbjct: 485 QAVVIPVAP---TFNDYAEKTAKDLAAQGLRVKADIDTDRMNAKIRKYQEQRIPYQLIVG 541 Query: 408 SKFVSDSK--VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 K ++ V I H G ++ M+ E +N+ + + + Sbjct: 542 EKEAANGSLAVRIHH---GDQKTMTTEAFVNFIKEKIATH 578 >gi|78778982|ref|YP_397094.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus marinus str. MIT 9312] gi|123755107|sp|Q31BT7|SYT_PROM9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78712481|gb|ABB49658.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus marinus str. MIT 9312] Length = 638 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 81/382 (21%), Positives = 143/382 (37%), Gaps = 42/382 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + S G+ W P G + IRE + +E+ P LW +SG ++ + Sbjct: 255 IQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSLWEKSGHWEKFRD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +M A N I P + +F +KSY++LP + R+E G+M Sbjct: 315 DMFTTASENRTYAI-KPMNCPCHIQLFNQGLKSYKDLPIRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F E + + ++ G I ++ + P S E Sbjct: 374 RVRNFTQDDAHIF-CKEEQIQEEVSTFIDLVFEVYKTFGFDEIIIKLSTRPEKRVGSEEI 432 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ T+ +K+ P E + I + L D Sbjct: 433 WDKSEEALTKALDNKNLKWELQPGEGAFYGPKIEFS--------------------LKDC 472 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 L N+ I+V +S+P + AT+ D K + V + +G+ Sbjct: 473 L--NRVWQCGTIQVD--------FSMPIRLEATYVDIDNEKRNPVMLHRAILGSFERFIG 522 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ ++ K IW +AP++I L++I + + C K ++ G D E+ Sbjct: 523 ILIEQYEAKFPIW---LAPYQIILLSITDRNN---EKCLKFNELINNNGYRSKVDIRNEK 576 Query: 388 IGSQFAVADLLGFPLQVIVGSK 409 IG + A + PL ++G K Sbjct: 577 IGYKIREATISRIPLIAVIGDK 598 >gi|19113156|ref|NP_596364.1| cytoplasmic threonine-tRNA ligase Trs1 (predicted) [Schizosaccharomyces pombe 972h-] gi|3183175|sp|P87144|SYTC_SCHPO RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2104451|emb|CAB08788.1| cytoplasmic threonine-tRNA ligase Trs1 (predicted) [Schizosaccharomyces pombe] Length = 703 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 78/394 (19%), Positives = 156/394 (39%), Gaps = 39/394 (9%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G +LP G + + + +R + ++ G E+ P + + +LW SG +++Y + M Sbjct: 307 SPGSCFFLPHGARIYNTLLKYMRYQYSKRGYQEVITPNMYNVNLWKTSGHWNNYSENMFS 366 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +K + P + +F+S +SYR+LP+ + R+E G+ R R Sbjct: 367 FDIEKEKYAL-KPMNCPGHCVMFKSRDRSYRDLPWRVADFGVLHRNEFSGALSGLTRVRR 425 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFI 211 F DA+ F TP+ + F ++ G + R E +G + Sbjct: 426 FQQDDAHIF-CTPDQVRSEIEGCFDFLKEVYGTFGFTFHLELSTRPEEKYLGD------L 478 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D E Q+ + D + D A Y D+ +FD+L Sbjct: 479 ATWDKAEAQLKAALDASGYKWELNAGD--------------GAFYGPKIDI---TVFDAL 521 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY----VQMGSYGIGAMRVVAA 327 + + ++ F ++ P SA G ++ V + +G++ + A Sbjct: 522 KRQHQCATIQLDFQLPERFQLEFHAPASAEEAKESGNNNKYTRPVMVHRAILGSLERMIA 581 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + GK WP ++P ++ +I + A + +K++ LS+ V D Sbjct: 582 ILTEHYAGK---WPFWMSPRQVCIIPVSA---AAYNYADKVHNILSEADIFVDTDKSDNT 635 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + A L + +VG++ S + V +++R Sbjct: 636 LPKKIRNAQLAQYNFIFVVGAEEESTNSVNVRNR 669 >gi|320156122|ref|YP_004188501.1| threonyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] gi|319931434|gb|ADV86298.1| threonyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] Length = 642 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 87/422 (20%), Positives = 159/422 (37%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IRE+ G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSVFRDLEVFIREKLAEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + N + + Y + G +I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIFCTESQIQDEVTNCIKMVY-DTYQTFGFDNIAVKLSTRPEQRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + MD I E A Y + L Sbjct: 433 ----EIWDQSEEALKQALESMDIAY--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 FD L R + G + ++LP + AT+ G + + M I G++ Sbjct: 472 FDCL-------GRAWQCGTV---QLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++I +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVIMNITDKQA---DYVQEIAQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++ G + + ++ ++ R +++ ++Y + ++ Sbjct: 576 NEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQIAS 635 Query: 445 NR 446 + Sbjct: 636 RK 637 >gi|311898556|dbj|BAJ30964.1| putative prolyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 470 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/335 (20%), Positives = 138/335 (41%), Gaps = 62/335 (18%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ + F ++S+R+LP Q R ELRPR +R+ EFL ++ Sbjct: 103 EEPVVVRPTSETIINEYFSKWVQSHRDLPLLINQWANVVRWELRPRV-FLRTTEFLWQEG 161 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E ++ +Y H T Sbjct: 162 HTAHATYEDAR--------AYASRIH--------------------------------TD 181 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 V+ DFM +++ ++ ++ + TA ++ L + + K Sbjct: 182 VYG--DFM-----------TNVLGIDVVLGRKTAKERFAGAINTLTLEGMMGDGK----- 223 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 +++G G ++ + T++ + +V S+G+ + R+V +I S D G+ Sbjct: 224 ALQMGTSHELGQNFAKAFNTTYQLQGAEREHVWQTSWGV-STRMVGGLIMSHGDDNGLRV 282 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV-ADLLG 399 P +A + ++ IK D V E I A+L G V DD + + AV +L G Sbjct: 283 PPRLAAVQAVVLAIKGEDAVLAKVRE-IGAQLEAAGVRVVVDDRTDTPFGRRAVDWELKG 341 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 PL++ VG + + + R+ G +E +S++ + Sbjct: 342 VPLRIEVGPRDLEAGTAMLVRRIAGGKEPVSVDSL 376 >gi|238620001|ref|YP_002914827.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|259511621|sp|C4KHU5|SYP_SULIK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|238381071|gb|ACR42159.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.4] Length = 481 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 12/175 (6%) Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 FD++ + +V +++G + + G +S + + DG Y SYGI R +A+ Sbjct: 215 FDTIMPDGKV----MQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISD-RAIAS 269 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHD-----QVCRDACEKIYARLSKVGCDVFWD 382 VI D G I P SVAP K+ ++ I A + QV + + E I L+K D Sbjct: 270 VIAIHGDDHGPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSIE-ICEMLNKNNITCVTD 328 Query: 383 DMGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+ G +F + ++ G P+++ +G + ++ S V IK R + EEV+N Sbjct: 329 QDTEKTPGEKFYIWEIKGVPIRLEIGPRELASSTVFIKRRDNLKSYTVKKEEVVN 383 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 10/175 (5%) Query: 26 MLRTGMIHQHS----KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +LR G + + KG+ W+P G K N+ +IIR + TG E+ P L DL Sbjct: 19 VLREGEFYDYGRYPVKGMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLS 78 Query: 82 -ESGRYDSYGKEMLRL----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 ES + +E+ + ++ D + PT E +T + +KSY+ LP +YQI Sbjct: 79 RESTHIKGFEEEVFWVTKGGSEDLDVKLALRPTSEVAITTMENLWLKSYKQLPKKYYQIV 138 Query: 137 LKFRDELRPRFGVMRSREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FR E + ++R RE K+A++ T + ++ + Y +IF+ L + Sbjct: 139 SVFRYETKATRPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLTI 193 >gi|229085293|ref|ZP_04217535.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228698012|gb|EEL50755.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 642 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + + +RE Q + E+ P + + LW ESG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELESFLREIQQKYDYQEVRTPIMMNQGLWEESGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D Y K+ + ++ ++K+ P + +F+ ++SYR+LP + R E Sbjct: 314 DHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKHKLRSYRDLPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|228469293|ref|ZP_04054319.1| threonyl-tRNA synthetase [Porphyromonas uenonis 60-3] gi|228309192|gb|EEK17794.1| threonyl-tRNA synthetase [Porphyromonas uenonis 60-3] Length = 650 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 96/418 (22%), Positives = 169/418 (40%), Gaps = 62/418 (14%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + + ++ Q R G ++ P + + +L+ SG Y YG + ++ Sbjct: 264 QGLPLWLPRGTQLRLKLEDFLKRIQKRYGYQQVMTPHIGNVELYKTSGHYAKYGADSFQV 323 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + +A + P + +I++ SYR+LP + +R E G+ R R Sbjct: 324 ITTPQEGEAFMLKPMNCPHHCEIYKLKPHSYRDLPVRLAEFGTVYRYEQSGELHGLTRVR 383 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS----IPMRAE---SGPIGGDL 206 F DA+ F P+ K + K+ IF L ++ I +R++ S IG + Sbjct: 384 GFTQDDAHIF-CRPDQVKEEFLKVMEIIFIIFRALDFENFEAQISLRSQTDRSKYIGSEE 442 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + D E + + P + ++D+ A Y D Sbjct: 443 NW------DRAEQAIIEACQEAGLPA---HVEYDE-----------AAFYGPKLDFM--- 479 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAM- 322 + D+L R ++G I Y+LP + G D + H V + G+M Sbjct: 480 VKDAL-------GRRWQLGTI---QVDYNLPERFELEYTGEDNQKHRPVMIHRAPFGSME 529 Query: 323 RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 R VA +IE + GK +W PD V +S + D ++ A LS+ V Sbjct: 530 RFVAVLIEHTA-GKFPLWLSPDQVVILPVS--------ERFNDYAYEVAAALSEQDISVS 580 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E++G + +L P +IVG + +D V ++ + G D E++ +A Sbjct: 581 VDDRNEKVGRKIRDNELKRIPYMLIVGEQEQADGTVSVRKQGEG---DAGTEKISTFA 635 >gi|153806270|ref|ZP_01958938.1| hypothetical protein BACCAC_00526 [Bacteroides caccae ATCC 43185] gi|149130947|gb|EDM22153.1| hypothetical protein BACCAC_00526 [Bacteroides caccae ATCC 43185] Length = 497 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 85/166 (51%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ +I I +D+ + K I +L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIIPIYKNDEQLKQIDAKVAGIVTKLKALGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++++G + + ++ +E+ R T +E ++ E + Y + Sbjct: 355 YELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETITCEGIEAYVQN 400 Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I+SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|126740677|ref|ZP_01756363.1| threonyl-tRNA synthetase [Roseobacter sp. SK209-2-6] gi|126718192|gb|EBA14908.1| threonyl-tRNA synthetase [Roseobacter sp. SK209-2-6] Length = 649 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 12/190 (6%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G K + +R Q R G +E++ P + LW SG +D Y + Sbjct: 260 MQEEAPGQVFWHPNGWKIYTTLQDYMRRMQERDGYVEVNTPQVVDRKLWEASGHWDKYQE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + D A P + +F +KSYR+LP + R E Sbjct: 320 NMFIVEVDEDHAREKAINALKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCARYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP--- 201 G+MR R F D + F E S F+++L +++ LG + ++ + P Sbjct: 380 LHGIMRVRGFTQDDGHIF--CSEDQIESETAKFIAFLSKVYADLGFHNWTIKLSTRPEKR 437 Query: 202 IGGDLSHEFI 211 IG D S + + Sbjct: 438 IGSDESWDLV 447 >gi|291521022|emb|CBK79315.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Coprococcus catus GD/7] Length = 585 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 90/412 (21%), Positives = 154/412 (37%), Gaps = 68/412 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ +LP G + I+E++ + G + P + + +L+ SG +D Y + M Sbjct: 200 GRGLPMFLPKGYTIWQELENYIKEKERKLGYQHVMTPCVGTVNLYKTSGHWDHYKENMFP 259 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + +D+A + P + I+ + SYR+LP +I FR E G+ R R Sbjct: 260 AMEVDDEAFVLRPMNCPHHMMIYANKRHSYRDLPIRIGEIAHDFRYEASGTLKGIERGRH 319 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F +TPE K +++ DL F Sbjct: 320 FCQNDAHLF-VTPEQIKDEISRVV--------------------------DLI--FSTYE 350 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D G T C D P + + D E W A +V NE + E Sbjct: 351 DFGITDYRCVLSLRD---PEDKAKYHDDD------EMWNKAENALREVMNELGLEYTEEI 401 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKD------HYVQMG 315 + G + VG+ T + LP T+ DG+ H +G Sbjct: 402 GEAAFYGPKLDVNVKPAVGNEITLSTCQLDFCLPAKFQLTYVDKDGEMKTPVVLHRAILG 461 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 S R +A ++E + KG + P +AP ++ ++ +K D +I L Sbjct: 462 SLD----RFMAYILEET---KGNL-PTWLAPIQVKVMPVKTDDDDLNAYANEICELLEAQ 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 V DD E++G + + P +++G F + +RL G ++ Sbjct: 514 NVRVDLDDRAEKLGYRMREGQIQKVPYLLVIG--FNEKDNRTVSYRLHGEKD 563 >gi|323474896|gb|ADX85502.1| prolyl-tRNA synthetase [Sulfolobus islandicus REY15A] Length = 481 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 12/175 (6%) Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 FD++ + +V +++G + + G +S + + DG Y SYGI R +A+ Sbjct: 215 FDTIMPDGKV----MQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISD-RAIAS 269 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHD-----QVCRDACEKIYARLSKVGCDVFWD 382 VI D G I P SVAP K+ ++ I A + QV + + E I L+K D Sbjct: 270 VIAIHGDDHGPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSIE-ICEMLNKNNITCVTD 328 Query: 383 DMGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+ G +F + ++ G P+++ +G + ++ S V IK R + EEV+N Sbjct: 329 QDTEKTPGEKFYIWEIKGVPIRLEIGPRELASSTVFIKRRDNLKSYTVKKEEVVN 383 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 10/175 (5%) Query: 26 MLRTGMIHQHS----KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +LR G + + KG+ W+P G K N+ +IIR + TG E+ P L DL Sbjct: 19 VLREGEFYDYGRYPVKGMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLS 78 Query: 82 -ESGRYDSYGKEMLRL----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 ES + +E+ + ++ D + PT E +T + +KSY+ LP +YQI Sbjct: 79 RESTHIKGFEEEVFWVTKGGSEDLDVKLALRPTSEVAITTMENLWLKSYKQLPKKYYQIV 138 Query: 137 LKFRDELRPRFGVMRSREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FR E + ++R RE K+A++ T + ++ + Y +IF+ L + Sbjct: 139 SVFRYETKATRPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAI 193 >gi|194210848|ref|XP_001916146.1| PREDICTED: similar to threonyl-tRNA synthetase 2, mitochondrial [Equus caballus] Length = 667 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 102/426 (23%), Positives = 167/426 (39%), Gaps = 60/426 (14%) Query: 18 AEIASHKLMLRTGMI--HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 +I + KL+ + H+ S G +LP G + + + A IR E +R G E+ PTL Sbjct: 248 GQIGALKLLTEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYSRRGFSEVKTPTLF 307 Query: 76 SADLWVESGRYDSYGKEMLRL----ADRNDKA------------MIYGPTHEEVMTDIFR 119 S LW SG ++ Y ++M L +DR + + P + +F Sbjct: 308 STKLWELSGHWEHYQEDMFALQPPGSDRPTGSQSDHSTSHPTDTLALKPMNCPAHCLMFA 367 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP L + G+ R R F DA+ F P+ + Sbjct: 368 HRPRSWRELPLRLADFGLHRAEVSGSLGGLTRLRRFQQDDAHIF-CAPDQLEAEIRGCLD 426 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ LG S + + P G F+ GE C D + + +F Sbjct: 427 FLRSIYAVLGF-SFRLALSTRPSG------FL-----GEP---CLWDQAEQVLQQALEEF 471 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM- 298 + LN A Y DVH L D+L R + G I + LP+ Sbjct: 472 GEPWDLNPGD---GAFYGPKIDVH---LHDAL-------GRSHQCGTI---QLDFQLPLR 515 Query: 299 -SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 +KG G +H V + +G++ + ++ S GK WP ++PF++ +I + Sbjct: 516 FDLQYKGQAGALEHPVLIHRAVLGSVERMLGMLAESCGGK---WPLWLSPFQVVVIPVGT 572 Query: 357 HDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + R+A + A + + CD+ D G + + A L + Q +VG K S Sbjct: 573 EQEGYAREAQRSLQA--AGLVCDLD-ADSGLTLSRRVRRAQLAHYNFQFVVGQKEQSKRT 629 Query: 416 VEIKHR 421 V I+ R Sbjct: 630 VNIRTR 635 >gi|227830538|ref|YP_002832318.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|229579351|ref|YP_002837749.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|229581889|ref|YP_002840288.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] gi|284998034|ref|YP_003419801.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] gi|259511622|sp|C3MQL0|SYP_SULIL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|259511624|sp|C3NGV6|SYP_SULIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|259511625|sp|C3NET8|SYP_SULIY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|227456986|gb|ACP35673.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|228010065|gb|ACP45827.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|228012605|gb|ACP48366.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] gi|284445929|gb|ADB87431.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] Length = 481 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 12/175 (6%) Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 FD++ + +V +++G + + G +S + + DG Y SYGI R +A+ Sbjct: 215 FDTIMPDGKV----MQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISD-RAIAS 269 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHD-----QVCRDACEKIYARLSKVGCDVFWD 382 VI D G I P SVAP K+ ++ I A + QV + + E I L+K D Sbjct: 270 VIAIHGDDHGPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSIE-ICEMLNKNNITCVTD 328 Query: 383 DMGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+ G +F + ++ G P+++ +G + ++ S V IK R + EEV+N Sbjct: 329 QDTEKTPGEKFYIWEIKGVPIRLEIGPRELASSTVFIKRRDNLKSYTVKKEEVVN 383 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 10/175 (5%) Query: 26 MLRTGMIHQHS----KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +LR G + + KG+ W+P G K N+ +IIR + TG E+ P L DL Sbjct: 19 VLREGEFYDYGRYPVKGMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLR 78 Query: 82 -ESGRYDSYGKEMLRL----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 ES + +E+ + ++ D + PT E +T + +KSY+ LP +YQI Sbjct: 79 RESTHIKGFEEEVFWVTKGGSEDLDVKLALRPTSEVAITTMENLWLKSYKQLPKKYYQIV 138 Query: 137 LKFRDELRPRFGVMRSREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FR E + ++R RE K+A++ T + ++ + Y +IF+ L + Sbjct: 139 SVFRYETKATRPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAI 193 >gi|323477637|gb|ADX82875.1| prolyl-tRNA synthetase [Sulfolobus islandicus HVE10/4] Length = 481 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 12/175 (6%) Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 FD++ + +V +++G + + G +S + + DG Y SYGI R +A+ Sbjct: 215 FDTIMPDGKV----MQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISD-RAIAS 269 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHD-----QVCRDACEKIYARLSKVGCDVFWD 382 VI D G I P SVAP K+ ++ I A + QV + + E I L+K D Sbjct: 270 VIAIHGDDHGPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSIE-ICEMLNKNNITCVTD 328 Query: 383 DMGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+ G +F + ++ G P+++ +G + ++ S V IK R + EEV+N Sbjct: 329 QDTEKTPGEKFYIWEIKGVPIRLEIGPRELASSTVFIKRRDNLKSYTVKKEEVVN 383 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 10/175 (5%) Query: 26 MLRTGMIHQHS----KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +LR G + + KG+ W+P G K N+ +IIR + TG E+ P L DL Sbjct: 19 VLREGEFYDYGRYPVKGMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLS 78 Query: 82 -ESGRYDSYGKEMLRL----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 ES + +E+ + ++ D + PT E +T + +KSY+ LP +YQI Sbjct: 79 RESTHIKGFEEEVFWVTKGGSEDLDVKLALRPTSEVAITTMENLWLKSYKQLPKKYYQIV 138 Query: 137 LKFRDELRPRFGVMRSREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FR E + ++R RE K+A++ T + ++ + Y +IF+ L + Sbjct: 139 SVFRYETKATRPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAI 193 >gi|224613500|gb|ACN60329.1| Threonyl-tRNA synthetase, cytoplasmic [Salmo salar] Length = 383 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 91/416 (21%), Positives = 160/416 (38%), Gaps = 56/416 (13%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G +LP G + + I+ E R G E+ PTL S LW SG ++ Y + M Sbjct: 2 SPGSCFFLPKGAHIYNTLADFIKTEYRRRGFHEVVTPTLYSTALWERSGHWEHYSENMFT 61 Query: 96 L-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + D + A+ P + +F ++S+R LP + R+EL G+ R R Sbjct: 62 VTGDTHTYAL--KPMNCPAHCLMFEQRVRSWRELPLRWADFGALHRNELSGALGGLTRVR 119 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TPE + + ++R +R+ S + P H L Sbjct: 120 RFCQDDAHIF-CTPEQLEEEIMAC-LDFVRSVYRVFGFSFHCLLSTRPTPCLGEH---AL 174 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDVHNEKL 267 D E Q+ SL E+W A Y D+ ++ Sbjct: 175 WDHAEQQL--------------------ERSLQQFGERWQLNPGDGAFYGPKIDI---QI 211 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVA 326 D++ + + ++ F ++ L + G DG+ H V + +G++ + Sbjct: 212 KDAIGRQHQCATIQLD----FQLPIRFDL----QYVGGDGETHRPVMVHRAVLGSLERMI 263 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG--CDVFWDDM 384 A++ + GK WP ++P ++ +I + + +++ + + G DV DD Sbjct: 264 AILAENFGGK---WPLWLSPAQVIIIPVGGGSET---YAQQVVRQFREAGFMADVD-DDQ 316 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G + + A L + +VG K V ++ R EEV+ SH Sbjct: 317 GATLNKKIRSAQLAQYNYIFVVGEKECESGTVSVRTRGGKQLGRRPTEEVLASLSH 372 >gi|319957838|ref|YP_004169101.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] gi|319420242|gb|ADV47352.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] Length = 605 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 3/135 (2%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + I+ R G + P + AD+W SG Y YG+ M L Sbjct: 231 GLPFWLPKGARLRSKLEQILWRSHRRRGYEPVRGPEILKADMWRTSGHYACYGENMY-LT 289 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + + P + IF++ KSYR+LP +++ + R E G++R REF Sbjct: 290 EIDGQEYGLKPMNCIGHILIFKNSTKSYRDLPLKYFEYGVVHRHEKSGVLHGLLRVREFT 349 Query: 157 MKDAYSFDLTPEGSK 171 DA+ F TPE K Sbjct: 350 QDDAHIF-CTPEQIK 363 >gi|307822740|ref|ZP_07652971.1| threonyl-tRNA synthetase [Methylobacter tundripaludum SV96] gi|307736344|gb|EFO07190.1| threonyl-tRNA synthetase [Methylobacter tundripaludum SV96] Length = 635 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 88/416 (21%), Positives = 160/416 (38%), Gaps = 57/416 (13%) Query: 17 DAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + +T + H + + G+ W G V IRE+ G E+ P Sbjct: 237 EAEKRDHRKLAKTLDLFHSQEEAPGMVFWHEKGWVIYQQVEQYIREKLRVNGYGEVKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW SG ++ +G +M+ ++ P + I+ +KSYR+LP Sbjct: 297 VVDRSLWERSGHWEKFG-DMIFTTHSENRDYAIKPMNCPCHVQIYNQGLKSYRDLPIRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLK 191 + R+E G+MR R F+ DA+ F EG F+ L ++ G + Sbjct: 356 EFGSCHRNEPSGTLHGLMRVRNFVQDDAHIF--CTEGQIQDEVSTFIDMLFDVYKDFGFE 413 Query: 192 SIPMRAESGPIG--GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + ++ + P GD S + D E + ++LN+ Sbjct: 414 EVIIKLSTRPANRVGDDS-----VWDKAENALE--------------------LALNTKG 448 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKG 304 +W + K+ SL + +G ++ GT +S+P + AT+ Sbjct: 449 LKWDLQ-PGEGAFYGPKIEFSLKDC---------IGRVWQCGTIQVDFSMPGRLDATYIA 498 Query: 305 ADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG M I G++ ++ H G +W ++P ++ ++NI + Sbjct: 499 EDGSRQVPVMLHRAILGSLERFIGILIEQHAGTFPLW---LSPVQVVVLNITDRHA---E 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +I L K G V D E+IG + + P VI+G K + + ++ Sbjct: 553 YAAQIMLDLEKQGIRVKIDLRNEKIGFKIREHSMQRVPYLVIIGDKELEQQSITVR 608 >gi|75523950|sp|Q7X2P1|SYP_SPHEL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|32188210|gb|AAP46176.1| putative prolyl-tRNA synthetase [Sphingomonas elodea] Length = 510 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 73/349 (20%), Positives = 132/349 (37%), Gaps = 81/349 (23%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E V+ ++S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 115 EEPLVVRPTSETVIGAAMSRWVQSWRDLPVLINQWANVVRWEMRTRM-FLRTAEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E ++ KM Y R F L ++P+ A P Sbjct: 174 HTAHATVEEAQEETRKMLEVY-RDFAETCL-AMPVVAGEKP------------------- 212 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 EN F +S SI E + Sbjct: 213 --------------ENERFPGAVSTFSI------------------------EAMMQDGK 234 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + GT +S F+ ++G+ Q S+G+ + R++ +I D G+ Sbjct: 235 ALQAGTSHFLGTTFSSAQDIKFQNSEGQFELAQTTSWGV-STRMIGGLIMVHGDDDGLRV 293 Query: 341 PDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 P VAP++I ++ + + D D C+ + A L+K+ +GE + + + + Sbjct: 294 PPMVAPWQIVIVPMLRDQPEDAATIDYCKSLQAELAKLTA------LGEPVRALLDLKAV 347 Query: 398 -----------LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P+ + VG + V+ V + R RED L+ I Sbjct: 348 KAQTKRWGWVKKGAPIVIEVGGRDVAGGNVSVIQRNKLYREDGKLDSRI 396 >gi|58039289|ref|YP_191253.1| threonyl-tRNA synthetase [Gluconobacter oxydans 621H] gi|73919795|sp|Q5FSP9|SYT_GLUOX RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|58001703|gb|AAW60597.1| Threonyl-tRNA synthetase [Gluconobacter oxydans 621H] Length = 645 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 85/411 (20%), Positives = 150/411 (36%), Gaps = 46/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G W G + + +R Q R E+ P L LW SG +D Y + Sbjct: 256 IQEEAVGQIFWHRKGWRLYTVLQDYMRRAQERNNYEEVRTPQLVDRALWEASGHWDKYRE 315 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + + DK + P + IFR ++SYR LP + R E G+ Sbjct: 316 NMFIATVEDEDKTLALKPMNCPCHVQIFRHGLRSYRELPLRMAEFGACHRYEPSGALHGI 375 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F DA+ F T + K ++ LG + ++ P S E Sbjct: 376 MRVRGFTQDDAHIF-CTDDQIADETAKFVKMLAEVYSDLGFDTFRVKFSDRPETRAGSDE 434 Query: 210 FIVLADTGETQVFCSKDFMDFPI-PSENTDFD---DIISLNSIVEQWTAPYAATSDVHNE 265 A+ G + C +++ P E + + + ++I W V Sbjct: 435 VWDRAE-GSLKKACEIAGVEYEYNPGEGAFYGPKLEFVLTDAIGRDWQCGTLQVDYV--- 490 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRV 324 LPE + A++ G D H M I G+ Sbjct: 491 -----LPER-----------------------LDASYIGEDSNRHRPVMLHRAILGSFER 522 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + GK +W +AP ++ + +I + D ++ A L G V D Sbjct: 523 FIGILIEQYAGKFPLW---LAPTQVVVASIVSD---AADYANEVAATLKAAGLQVETDTR 576 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++I ++ L P+ ++VG + + KV ++ +E +SL++ + Sbjct: 577 SDKINAKIREHSLARVPVILVVGRREAEERKVAMRRLGGAAQEILSLDDAV 627 >gi|32140557|dbj|BAC78195.1| prolyl-tRNA synthetase [Raphanus sativus] Length = 544 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 77/330 (23%), Positives = 134/330 (40%), Gaps = 75/330 (22%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ +F I SYR+LP Q R E+R + +R+ EFL ++ Sbjct: 163 EEKLVVRPTSETIVNHMFTQWIHSYRDLPLMINQWANVTRWEMRTK-PFIRTLEFLWQEG 221 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK--SIPMRAESGPIGGDLSHEFIVLADTGE 218 ++ TPE ++ +M + I+ R + SIP+ A G E ADT Sbjct: 222 HTAHATPEEAEKEAKQM----IEIYTRFAFEQTSIPVIA-----GRKSKLETFAGADTTY 272 Query: 219 TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 T + +++ A A TS HN Sbjct: 273 T-------------------------IEAMMGDRKALQAGTS--HN-------------- 291 Query: 279 ARGIEVGHIF--YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 +G F FGT+ F+ +G+ +V S+ + + R V +I + D Sbjct: 292 -----LGQNFSRAFGTQ--------FQDENGERQHVWQTSWAV-STRFVGGIIMTHGDDT 337 Query: 337 GIIWPDSVAPFKISLINIKAHD----QVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQ 391 G++ P +AP ++ ++ I D QV A + L G V DD E+ G + Sbjct: 338 GLMLPPKIAPIQVVIVPIWKKDTEKTQVL-SAASSVKEVLQTAGVRVKLDDTTERTAGWK 396 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 F ++ G P+++ +G + VS + V + R Sbjct: 397 FNFWEMKGVPIRIEIGPRDVSSNCVVVSRR 426 >gi|311031377|ref|ZP_07709467.1| threonyl-tRNA synthetase [Bacillus sp. m3-13] Length = 643 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 88/406 (21%), Positives = 167/406 (41%), Gaps = 40/406 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I +++ G + P + S +L+ SG +D Y M Sbjct: 264 QGLPLWLPKGATIRRVIERYIVDKEVELGYDHVYTPVMGSVELYKTSGHWDHYQDGMFPP 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P + ++++ I SYR LP ++ R E+ G+ R R Sbjct: 324 MEMDNEQLVLRPMNCPHHMMVYKNSIHSYRQLPVRIAELGTMHRYEMSGALAGLQRVRGM 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K ++ L ++ GL R LS+ D Sbjct: 384 TLNDAHIF-VRPDQIKDELKRVVNLVLEVYKDFGLDDYSFR---------LSYR-----D 428 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLN---SIVEQWTAPYAATSDVHNEKLFDSLP 272 + + D M + D + L+ +I E A Y DV ++ +L Sbjct: 429 PENKEKYFDDDAMWEKAQGMLKEAMDELGLDYFEAIDE--AAFYGPKLDV---QVRTALG 483 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIE 330 + + +S ++ F K+ L T+ G DGK H + G+ + R VA +IE Sbjct: 484 KEETLSTVQLD----FLLPEKFDL----TYVGEDGKQHRPVVIHRGVVSTMERFVAFLIE 535 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ +I + D +++ L G V D+ E+IG Sbjct: 536 EY---KG-AFPTWLAPVQVQVIPVSPDAHF--DYAKEVQDLLKSKGIRVEMDERNEKIGY 589 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + A + P +++G + + V ++ E +SLE+ ++ Sbjct: 590 KIREAQMQKIPYMLVLGDNEIQERAVNVRKYGEQKSETISLEKFVD 635 >gi|296448072|ref|ZP_06889975.1| prolyl-tRNA synthetase [Methylosinus trichosporium OB3b] gi|296254429|gb|EFH01553.1| prolyl-tRNA synthetase [Methylosinus trichosporium OB3b] Length = 514 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/286 (21%), Positives = 109/286 (38%), Gaps = 64/286 (22%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GK ++ + ++ +I PT E ++ D FR + S+R+LP Q R E+R R Sbjct: 103 GKLVVDPDSKLEEPLIVRPTSETIIGDAFRRWVSSHRDLPVLINQWANVVRWEMRTRL-F 161 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ ++ KM Y I + ++P+ A P Sbjct: 162 LRTSEFLWQEGHTAHADEADAREETRKMLEVYREIVE--DVLAVPVIAGEKP-------- 211 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 EN F ++ SI Sbjct: 212 -------------------------ENERFPGAVNTYSI--------------------- 225 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 E + ++ G Y GT ++ + F+GA G+ + S+G+ + R+V VI Sbjct: 226 ---EAMMQDGKALQAGTSHYLGTNFAHAQNIRFQGASGELEFCHTTSWGV-STRLVGGVI 281 Query: 330 ESSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARL 372 + D G+ P ++AP +I ++ + K D CE + A L Sbjct: 282 MTHGDDDGLRLPPAIAPKQIVVVPMLRDKPEDSEVLAYCEALKADL 327 >gi|126658692|ref|ZP_01729837.1| Threonyl-tRNA synthetase, class IIa [Cyanothece sp. CCY0110] gi|126619954|gb|EAZ90678.1| Threonyl-tRNA synthetase, class IIa [Cyanothece sp. CCY0110] Length = 642 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 86/401 (21%), Positives = 155/401 (38%), Gaps = 41/401 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+ G + P + + +LW SG +D Y + M Sbjct: 265 GLVFWHPRGATMRYIIEDYWRKAHLDGGYELLYTPHVANLELWKTSGHFDFYRENMFDSM 324 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D ++A P + +++ + SYR P + ++ +R E G+MR R F Sbjct: 325 DIEEQAYQIKPMNCPFHVLTYKNDLHSYREFPLRWAELGTVYRYERSGVLHGLMRVRGFT 384 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F L + + + ++ +I G K + + P + E LA Sbjct: 385 QDDAHIFCLPTQIAAEILGVLNLTE-KILSDFGFKDYEVNLSTRPEKSVGTDEGWELATQ 443 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + SK + +D + A Y D+ K+ D++ + Sbjct: 444 ALVEALNSKSW---------EYIED--------KGGGAFYGPKIDI---KIKDAIGRTWQ 483 Query: 277 VSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 S ++ ++LP + ADG M I G++ ++ ++ Sbjct: 484 CSTIQVD----------FNLPERFDMEYVAADGSRQRPIMIHRAIFGSLERFYGILIENY 533 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G +W +AP ++ L+ + + R+ E + A L + G V D GE++G Q Sbjct: 534 AGDFPLW---LAPIQLRLLPV---SEAQREYGETVVATLKEAGYRVEIDCTGERLGKQIR 587 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 A+L P+ IVG+K V + I+ R G M L E+ Sbjct: 588 KAELEKIPVVAIVGNKEVETQSLSIRTRQQGDIGTMDLTEL 628 >gi|300778181|ref|ZP_07088039.1| threonine--tRNA ligase [Chryseobacterium gleum ATCC 35910] gi|300503691|gb|EFK34831.1| threonine--tRNA ligase [Chryseobacterium gleum ATCC 35910] Length = 639 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 86/419 (20%), Positives = 156/419 (37%), Gaps = 65/419 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-L 96 G+ WLP G + + + Q + G + P + + +L+V SG +D YG++ + + Sbjct: 260 GLPLWLPKGTALRRKLENFLSDAQKKGGYEFVMSPHIGAKELYVTSGHWDKYGEDSFQPI 319 Query: 97 ADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 N+ + + P + +I+++ SYR+LP + + +R E G+ R R Sbjct: 320 KTPNEGEEFLLKPMNCPHHCEIYKTSQWSYRDLPKRYAEFGTVYRYEQSGELHGLTRVRG 379 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F TP+ + K+ L +F LG + + + L Sbjct: 380 FTQDDAHLF-CTPDQLSEEFEKVIDLTLYVFKSLGFEDFVTQ--------------VSLR 424 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D Q + D E W +A + +K ++ E Sbjct: 425 DPENKQKYIGSD-----------------------ENWEKAESAIINAAEKKGLKTVIEY 461 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 + G + +G + GT Y+LP + G+D + H V + G Sbjct: 462 GEAAFYGPKLDFMVKDALGRKWQLGTIQVDYNLPERFDLHYIGSDNEKHRPVMIHRAPFG 521 Query: 321 AMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +M A++ + G +W PD IS + D +K+ L Sbjct: 522 SMERFIAILLENTAGDFPLWLSPDQFIILPIS--------EKYVDYSKKVSQFLENHDIS 573 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DD E+ G + A+L P ++VG + + ++ R G M LE+ + Y Sbjct: 574 GQIDDRNEKTGKKIRDAELKKIPFMLVVGENEEKEGTISVRRRGEGDLGVMKLEDFVAY 632 >gi|139437031|ref|ZP_01771191.1| Hypothetical protein COLAER_00165 [Collinsella aerofaciens ATCC 25986] gi|133776678|gb|EBA40498.1| Hypothetical protein COLAER_00165 [Collinsella aerofaciens ATCC 25986] Length = 611 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 94/416 (22%), Positives = 162/416 (38%), Gaps = 57/416 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ + G +LP G + + RE ++ G +E+S P + + LW SG +D Y Sbjct: 231 MMRDEAPGFPFFLPNGMILKNTLLDYWREIHHKAGYVEISTPLIMNKQLWKTSGHWDHYK 290 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M +D+ P + ++ S SYR LP +I L R ELR G+ Sbjct: 291 DNMYSTV-IDDEEYCIKPMNCPGGVLVYASKPHSYRELPIRAGEIGLVHRHELRGALHGL 349 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 R R F DA+ F + P+ + ++ + G K + R E +G D Sbjct: 350 FRVRCFNQDDAHLF-VRPDQLTDEIVGVVNLIDSVYQKFGFKYHVELSTRPEDS-MGSD- 406 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E A+ G + + MD+ + + F Y D H E Sbjct: 407 --EDWARAEEG-LRTALEQLHMDYEVNEGDGAF----------------YGPKIDFHLE- 446 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLPMS--ATFKGADG-KDHYVQMGSYGIG 320 DSL G + GT + +P++ + ADG K + + G Sbjct: 447 --DSL-------------GRTWQCGTVQLDFQMPLNFDLEYVDADGTKKRPIMLHRVCFG 491 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ GK W +AP ++ + + + RD ++ A+L + G V Sbjct: 492 SIERFIGILIEHFAGKFPTW---LAPVQVKALPVS---EKSRDYAHEVCAKLEEAGIRVV 545 Query: 381 WDDMGEQIGSQFAVADLLG-FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E+IG + A + P +I+G K V + ++ R + MS++E + Sbjct: 546 CDDRDEKIGYKIREARSIDRVPYMLILGEKEVEAGNISVRDRSNETVQ-MSVDEFV 600 >gi|183221772|ref|YP_001839768.1| threonyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911846|ref|YP_001963401.1| threonyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776522|gb|ABZ94823.1| Threonine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780194|gb|ABZ98492.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase; ThrRS) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 638 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 4/160 (2%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + + G W P G + + + IREE R Sbjct: 236 EYIFLIEEAKKRDHRKLGKELDLFS--FQDEAPGFPFWHPKGTVLWNTLASYIREECFRR 293 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + ++ LW +SG +D++ KE + D ++ P + I++ H+ S Sbjct: 294 GYQEIKTPAILNSSLWKKSGHWDNF-KENMYFTDIDESEFAVKPMNCPGCCLIYKYHMHS 352 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 YR LP F ++ R E+ G+ R R F DA+ + Sbjct: 353 YRELPLRFMELGNVHRHEMSGVLHGLFRVRAFTQDDAHIY 392 >gi|167758905|ref|ZP_02431032.1| hypothetical protein CLOSCI_01251 [Clostridium scindens ATCC 35704] gi|167663312|gb|EDS07442.1| hypothetical protein CLOSCI_01251 [Clostridium scindens ATCC 35704] Length = 641 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 87/398 (21%), Positives = 153/398 (38%), Gaps = 43/398 (10%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ G +LP G + + RE G +E+S P + S LW SG +D Y Sbjct: 253 MMCDEGPGFPFFLPKGMVLKNTLLDYWRELHKENGYVEVSTPIILSRHLWENSGHWDHYK 312 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M + D D A+ P + +++S +SY++LP ++ L R E G Sbjct: 313 DNMYTTMIDEEDYAV--KPMNCPGGMLVYKSEPRSYKDLPLRMGELGLVHRHEKSGALHG 370 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 + R R F DA+ F +TPE + + I+ G K Sbjct: 371 LFRVRCFTQDDAHIF-MTPEQIRDEIKGVARLIDEIYSLFGFK----------------- 412 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + V T S + + DD+ + E A Y D H E Sbjct: 413 -YHVELSTRPDNSMGSDEDWEMATEGLRGALDDLGLDYMVNEGDGAFYGPKIDFHLE--- 468 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVA 326 DS+ + +++ F +Y+ GADG+ H + + G++ R + Sbjct: 469 DSIGRTWQCGTIQLDMQMPQRFDLEYT--------GADGEKHRPIMIHRVAFGSIERFIG 520 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 +IE +P +AP ++ ++ I + + +K+ +L + G D+ E Sbjct: 521 ILIEHFAGA----FPTWLAPVQVKVLPIS---EKHLEYGKKVLEQLEEAGIRAELDERAE 573 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +IG + A + P ++VG+K + V ++ R G Sbjct: 574 KIGYKIREAQMNKIPYMLVVGAKEEEQNLVSVRSRFAG 611 >gi|146297790|ref|YP_001192381.1| threonyl-tRNA synthetase [Flavobacterium johnsoniae UW101] gi|189083608|sp|A5FP01|SYT_FLAJO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146152208|gb|ABQ03062.1| threonyl-tRNA synthetase [Flavobacterium johnsoniae UW101] Length = 648 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 80/400 (20%), Positives = 150/400 (37%), Gaps = 61/400 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G D + ++ Q + G ++ P + +L+V SG Y YG + + Sbjct: 259 QGLPLWLPKGAALRDRLEQFLKRAQKKAGYEQVVSPHIGQKELYVTSGHYAKYGADSFQP 318 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + + P + +I+ SY++LP + + +R E G+ R R Sbjct: 319 IHTPAEGEEFLLKPMNCPHHCEIYNVRPWSYKDLPKRYAEFGTVYRYEQSGELHGLTRVR 378 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TPE + K+ L +F LG ++ + I L Sbjct: 379 GFTQDDAHIF-CTPEQLDEEFKKVIDLVLYVFGSLGFENFTAQ--------------ISL 423 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D E W A + +K +++ E Sbjct: 424 RDQEDREKYIGTD-----------------------ENWEKAENAIINAAKDKGLNTVVE 460 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP T+KGAD + H V + Sbjct: 461 YGEAAFYGPKLDFMVKDALGRQWQLGTIQVDYNLPERFELTYKGADNELHRPVMIHRAPF 520 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G+M A++ G +W + P + ++++ + + +K+ L Sbjct: 521 GSMERFIAILLEHTAGNFPLW---LMPEQAIILSL---SEKYENYAKKVLDLLENHEIRA 574 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D+ E IG + A++ P +IVG + + + I+ Sbjct: 575 LIDNRNETIGKKIRDAEMQKIPFMLIVGEEEEKNGTISIR 614 >gi|325103180|ref|YP_004272834.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Pedobacter saltans DSM 12145] gi|324972028|gb|ADY51012.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Pedobacter saltans DSM 12145] Length = 642 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 87/409 (21%), Positives = 163/409 (39%), Gaps = 53/409 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-- 95 G+ WLP G + + + +++ Q + G ++ P + +L++ SG YD YG + + Sbjct: 262 GLPLWLPKGTALRERLVSFLQKAQQKAGYDQVITPHIGHKNLYITSGHYDKYGADSFQPI 321 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + P + +I++S +SY++LP + +R E G+ R R Sbjct: 322 KTPQEGEEFFLKPMNCPHHCEIYKSKPRSYKDLPVRLAEFGTVYRYEQSGELHGLTRVRG 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG----LKSIPMR---AESGPIGGDLS 207 F DA+ F P+ K + K+ L +F LG + + +R +S IG D Sbjct: 382 FTQDDAHLF-CRPDQVKEEFKKVIDLVLYVFKALGFDEYIAQVSLRDPENKSKYIGSD-- 438 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E +LA+ + K L ++VE A + Sbjct: 439 -ENWILAENAIIEAAAEK------------------GLPTVVETGEAAFYGPK------- 472 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRV 324 D + K R ++G I Y+LP + G+D + H V + G++ Sbjct: 473 LDFMV--KDALGRKWQLGTI---QVDYNLPERFELEYTGSDNQKHRPVMIHRAPFGSLER 527 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 AV+ G +W + P + ++ I + + +K+ L+ D Sbjct: 528 FVAVLIEHCAGNFPLW---LTPEQFIVLPI---SEKFEEYGKKVLDSLNNSDIRGLIDLR 581 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 E+IG + A++ P +I+G K + D V ++ G + M++EE Sbjct: 582 DEKIGRKIRDAEVKKLPYMLIIGEKEMQDGMVSVRKHGEGDKGSMTIEE 630 >gi|282898730|ref|ZP_06306717.1| Threonyl-tRNA synthetase, class IIa [Cylindrospermopsis raciborskii CS-505] gi|281196257|gb|EFA71167.1| Threonyl-tRNA synthetase, class IIa [Cylindrospermopsis raciborskii CS-505] Length = 610 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 8/166 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +++EQ + G + + P + DL+ SG + Y ++M + Sbjct: 224 GLPLWTPKGTLLRSILEDFLKKEQLKRGYLPVVTPHIARVDLFKTSGHWQKYKEDMFPMM 283 Query: 98 DRN------DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 N D+ + P + I++S ++SYR LP + +R E G+ Sbjct: 284 AENEESKALDQGFVLKPMNCPFHIQIYKSELRSYRELPMRLAEFGTVYRYEQSGELGGLT 343 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R R F + D++ F +TPE + + L +F RL LK+ R Sbjct: 344 RVRGFTVDDSHLF-VTPEQLDEEFLNVVDLILTVFRRLQLKNFKAR 388 >gi|155061091|gb|ABS90481.1| threonyl-tRNA synthetase [Streptomyces albus] Length = 439 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 87/389 (22%), Positives = 157/389 (40%), Gaps = 42/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + +R + R G + P L +L+ SG + Y ++M Sbjct: 57 GLPYWLPDGAAVRHALEEYVRAAERRAGYRHVYSPVLGKRELYEISGHWSHYSEDMFPPM 116 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM-RSREFL 156 + + M+ P+ I+RS +S+R LP ++ +R EL G + R R Sbjct: 117 EVGGEQMLLRPSLCPHHALIYRSRPRSHRELPLRMAELGGMYRAELSGVLGGLSRVRSIH 176 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE-SGPIGGDLSHEFIVLAD 215 + DA+ F + + + + + R + LG++ R GP G +++ + Sbjct: 177 LNDAHVFCTLDQAAGEARAALEM-IGRAYEALGIRPARFRLSLPGPGG-----KYVADPE 230 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + +D + ++ VE A Y DV ++ D Sbjct: 231 KWRRSTALLTEVLD----ASGVAYE-------AVEGEAAFYGPKIDV---QIADGQGRES 276 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSH 333 +S ++ FG +Y GADG H V + IG++ R VA ++E H Sbjct: 277 TLSTVQVDFHQPERFGLRYI--------GADGAGHRPVMIHRSVIGSVERAVAHLVE-EH 327 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQF 392 G W +AP +I+++ + QV E R + +G D G +G++ Sbjct: 328 GGAFPAW---LAPVQIAVLPVTG-AQV--PDGEAFLRRCAALGLRAEQADPGRGSLGARI 381 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 A L+ P QV++G + +D +V ++ R Sbjct: 382 RAARLV--PYQVVIGEEEAADGRVALRLR 408 >gi|169828364|ref|YP_001698522.1| prolyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] gi|168992852|gb|ACA40392.1| Prolyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] Length = 483 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 81/161 (50%), Gaps = 5/161 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + + ++ G Y GTK++ + + + YV S+G + R++ +VI D +G Sbjct: 219 NGKAVQAGTSHYLGTKFAEAFNIKYLNKANQHEYVHTTSWGT-STRLIGSVIMVHGDEQG 277 Query: 338 IIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 +I P +AP ++ LI + K + Q+ + + I+A L G V DD + G +F Sbjct: 278 LILPPRIAPTQVVLIPVGPWKKNPQIM-EQLDAIFAALKAKGIRVRLDDSDQSPGFKFNE 336 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++ +G + + +++ +K R ++ + L V+ Sbjct: 337 WELKGVPVRIELGPRDLENNQALLKARDEDEKQTIELATVV 377 >gi|327398462|ref|YP_004339331.1| threonyl-tRNA synthetase [Hippea maritima DSM 10411] gi|327181091|gb|AEA33272.1| threonyl-tRNA synthetase [Hippea maritima DSM 10411] Length = 620 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 89/400 (22%), Positives = 159/400 (39%), Gaps = 61/400 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+E + G + P + LW SG +D Y +E + Sbjct: 247 GLIIWHPKGAMLRYLIEEFERKEHLKRGYEFVKGPEILRTQLWKRSGHFDHY-RENMYFT 305 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +D++ P + +++S +SYR LP ++++ + R E G++R REF Sbjct: 306 EIDDQSFGIKPMNCLGHIQVYKSKKRSYRELPKRYFELGVVHRHEKSGVLHGLLRVREFT 365 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFIVL 213 DA+ F P+ + + G + I R E+ IG D E Sbjct: 366 QDDAHIF-CRPDQLNDEIIGVLNFVQDVMDIFGFEYELEISTRPENS-IGTDQQWELATN 423 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 A + + + ++D I E A Y DV KL D+L Sbjct: 424 A-------------LINALKNTGREYD-------INEGDGAFYGPKIDV---KLKDALGR 460 Query: 274 NKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKD------HYVQMGSYGIGAMRVV 325 + + ++LP T+ DGK+ H V +GS R + Sbjct: 461 KWQCAT----------IQCDFTLPERFDLTYVDEDGKEKQPVMVHRVILGS----IERFI 506 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 A +IE +++G +W +AP ++ ++ + + H+ +D +Y L G V ++ Sbjct: 507 AILIE-NYEGDFPVW---IAPVQVRVLPVSEKHEAYAKD----VYQTLKDRGIRVEIEER 558 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E +G + A+ P V+VG K + D + ++ R G Sbjct: 559 NETLGKKIRFAETDKVPYVVVVGDKEIEDKTISVRKRKEG 598 >gi|254294721|ref|YP_003060744.1| threonyl-tRNA synthetase [Hirschia baltica ATCC 49814] gi|254043252|gb|ACT60047.1| threonyl-tRNA synthetase [Hirschia baltica ATCC 49814] Length = 654 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 90/433 (20%), Positives = 159/433 (36%), Gaps = 68/433 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + ++G W P G + A IR Q+ G +E+ P L ++ W +SG + + + Sbjct: 256 LQSEAQGSVFWHPNGFMIWRQLEAYIRRRQDDDGYVEVKTPQLLNSVFWEQSGHWSKFRE 315 Query: 92 EMLRLADR-------------NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 M + D + M P + IF+ +SYR+LP + Sbjct: 316 NMFVVPDEIPSVEEEGPVLSGEGELMALKPMNCPAHVQIFKQGTRSYRDLPLRMAEFGCC 375 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 R+E G+MR R+ DA+ F + + + + + R++ GL I + Sbjct: 376 HRNEPHGALHGIMRVRQMTQDDAHIFCREDQVANETL-RFLNLFKRVYGDFGLDQISYKL 434 Query: 198 ESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 + P G D + D E + + + +FD E A Sbjct: 435 ATRPEQRAGNDETW------DQAEGALATA-------LNEAGLEFD-------YAEGEGA 474 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKD 309 Y + H L D+ +G + GT Y LP + AT+ G DG+ Sbjct: 475 FYGPKLEFH---LTDA-------------IGRTWQCGTLQLDYVLPERLDATYVGEDGEK 518 Query: 310 HYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H M + G ++ ++ G +W +AP ++++ I EK+ Sbjct: 519 HRPVMLHRAVFGTFERFMGILIENYAGAFPMW---LAPTQVAIATITPKADAY---AEKV 572 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR-- 426 ARL G V D E+I + + P+ ++G + K+ ++ G Sbjct: 573 AARLRAKGIRVELDLRHEKINYKVREHSHMKVPVIAVIGMNEAEEEKLALRRFGAGNARP 632 Query: 427 EDMSLEEVINYAS 439 E +SL+E S Sbjct: 633 EILSLDEACQLLS 645 >gi|259418221|ref|ZP_05742139.1| threonyl-tRNA synthetase [Silicibacter sp. TrichCH4B] gi|259345616|gb|EEW57460.1| threonyl-tRNA synthetase [Silicibacter sp. TrichCH4B] Length = 648 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 9/177 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + + +R Q++ G +E++ P + + LW SG +D+Y + Sbjct: 260 MQEEAPGMVFWHPNGWRIYTTLQDYMRRMQDKGGYVEVNTPQVVNRKLWEASGHWDNYQE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + D A P + +F +KSYR+LP + R E Sbjct: 320 NMFIVEVDEDHAREKAVNALKPMNCPCHIQVFNQGLKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP 201 G+MR R F D + F E + K FVS+L +++ LG + ++ + P Sbjct: 380 MHGIMRVRGFTQDDGHIF--CTEEQVEAETKEFVSFLAKVYQDLGFEKWRVKLSTRP 434 >gi|255283096|ref|ZP_05347651.1| proline--tRNA ligase [Bryantella formatexigens DSM 14469] gi|255266398|gb|EET59603.1| proline--tRNA ligase [Bryantella formatexigens DSM 14469] Length = 479 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 73/323 (22%), Positives = 123/323 (38%), Gaps = 67/323 (20%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAY 161 M PT E + D + + I SYR+LP + Q +++ RP +RSREFL ++ + Sbjct: 110 MCVRPTSETLFCDFYANDIHSYRDLPKVYNQWCSVMRWEKTTRP---FLRSREFLWQEGH 166 Query: 162 SFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 + T E ++ +M Y AD Sbjct: 167 TAHATAEEAEERTIQMLNVY--------------------------------AD------ 188 Query: 222 FCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 FC ++F+ P I TD + A Y S +H+ K S Sbjct: 189 FC-EEFLAIPVIKGRKTDKEKFAGAE-------ATYTIESLMHDGKALQS---------- 230 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 G FG ++ + D YV S+G+ R++ A+I D G++ Sbjct: 231 ----GTSHNFGDGFAKAFGIQYADKDNTLKYVHQTSWGM-TTRMIGAIIMVHGDNSGLVL 285 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P VAP ++ +I I+ D ++ L+ G V DD + G +F+ ++ G Sbjct: 286 PPRVAPTQVMVIPIQMQKDGVLDKANEVKTALAAAGLRVKLDDSEKSPGWKFSEQEMRGI 345 Query: 401 PLQVIVGSKFVSDSKVEIKHRLT 423 P+++ +G K + + I R T Sbjct: 346 PVRIELGPKDIEAGQAVIVRRDT 368 >gi|167763511|ref|ZP_02435638.1| hypothetical protein BACSTE_01885 [Bacteroides stercoris ATCC 43183] gi|167698805|gb|EDS15384.1| hypothetical protein BACSTE_01885 [Bacteroides stercoris ATCC 43183] Length = 646 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 91/428 (21%), Positives = 157/428 (36%), Gaps = 67/428 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + +R Q R E+ P + + L++ SG Y YGK+ + Sbjct: 261 KGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQP 320 Query: 97 ADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ Y P + I+++ +SY++LP + R E G+ R R Sbjct: 321 IHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K + ++ +F + ++ + I L Sbjct: 381 SFTQDDAHIF-CRPDQVKDEFLRVMDIISIVFQSMHFENFEAQ--------------ISL 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A + EK + E Sbjct: 426 RDKVNREKYIGSD-----------------------ENWEKAEQAIIEACEEKGLKARVE 462 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP + GAD + H V + Sbjct: 463 YGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPF 522 Query: 320 GAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G+M R VA +IE + GK +W PD VA IS + D +++ L + Sbjct: 523 GSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNDYAQEVKDYLKRYD 573 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D+ E+IG + ++ P +IVG K + +V ++ + G + M E+ Sbjct: 574 VRAIVDERNEKIGRKIRDNEMKRIPYMLIVGEKEAENREVSVRKQGEGDQGTMKFEDFAK 633 Query: 437 YASHRFSN 444 + N Sbjct: 634 KVNEEVQN 641 >gi|89891844|ref|ZP_01203345.1| threonyl-tRNA synthetase [Flavobacteria bacterium BBFL7] gi|89515749|gb|EAS18550.1| threonyl-tRNA synthetase [Flavobacteria bacterium BBFL7] Length = 648 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 82/395 (20%), Positives = 162/395 (41%), Gaps = 51/395 (12%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 +G+ WLP G + + +++ Q + G + P + S +L+V SG Y+ YG + + Sbjct: 261 QGLPLWLPKGAALRERLEDFLKKAQKKAGYEMVVSPHIGSKELYVTSGHYEKYGADSFQP 320 Query: 96 -LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 +D+ + P + +I++S SYR+LP F + +R E G+ R R Sbjct: 321 IKTPSDDEEFLLKPMNCPHHCEIYKSSQWSYRDLPKRFAEFGTVYRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + PE + + L +F LG ++ + + + Sbjct: 381 GFTQDDAHIFCM-PEQLDKEFKAVIDLVLYVFGSLGFENFTAQ--------------VSI 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIIS------LNSIVEQWTAPYAATSDVHNEKL 267 D + + + D ++ I +EN IIS L+ ++E+ A + Sbjct: 426 RDPKKPEKYIG-DTKNWEI-AENA----IISAAKDKGLDYVIEEGEAAFYGPK------- 472 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRV 324 D + K R ++G I Y+LP +KGAD + H V + G+M Sbjct: 473 LDFMV--KDALGRSWQLGTI---QVDYNLPERFDLWYKGADNESHRPVMIHRAPFGSMER 527 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 A++ G +W + P + +++++ + + +++ L D+ Sbjct: 528 FIAILLEHTGGNFPLW---LMPEQCTILSL---SEKYENYAKQVANSLENNEIRTTIDNR 581 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E +G + A++ P +IVG + D + ++ Sbjct: 582 AETMGKKIREAEMNKLPYMLIVGEQEEKDGTISVR 616 >gi|55981844|ref|YP_145141.1| threonyl-tRNA synthetase [Thermus thermophilus HB8] gi|7388285|sp|P56881|SYT_THET8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|6689424|emb|CAB65483.1| threonyl-tRNA synthetase [Thermus thermophilus] gi|55773257|dbj|BAD71698.1| threonyl-tRNA synthetase [Thermus thermophilus HB8] Length = 659 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 89/426 (20%), Positives = 161/426 (37%), Gaps = 56/426 (13%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM-- 93 KG+ WLP G + + A +REEQ R G ++ P + S +L+ SG Y Y + Sbjct: 270 GKGLVLWLPKGNVVREELMAFMREEQVRRGYQLVTTPHIGSLELYKTSGHYPYYAESQFP 329 Query: 94 -LRLADRN-DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVM 150 + +R ++ + P + I+ +SYR LP + +R E G+ Sbjct: 330 PISFKERGEEEEYLLKPMNCPHHIRIYAYRKRSYRELPLRLAEFGTVYRYEKAGELLGLT 389 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-----AESGPIGGD 205 R R F DA+ F TPE K + + L++F LGLK R +S GD Sbjct: 390 RVRGFTQDDAHIF-CTPEEVKGEFLGVLDLVLKVFATLGLKDYRARIGVRDPKSDKYVGD 448 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD----DIISLNSIVEQWTAPYAATSD 261 + LA+ + + ++ + + + + F D + +++ +W T Sbjct: 449 EAK--WALAER-QIEEAAAEAGLRYTVEEGDAAFYGPKLDFVVKDALGREWQ---LGTIQ 502 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIG 320 V +LPE FG T+ G DG++H V + G Sbjct: 503 VDY-----NLPER---------------FGL--------TYVGKDGEEHRPVMLHRAPFG 534 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ G +W + + D ++ RL + G Sbjct: 535 SLERFIGILIEHFAGDFPLW------LAPVQAVVVPVSEKQEDYAREVAGRLKEAGLRAE 588 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 D E++ ++ A++ P ++VG + ++ V ++ R G M L + A Sbjct: 589 ADTRPERMQARIRDAEVQKVPYILVVGEREKAEGAVSVRRRKKGNLGTMPLAAFLEGALR 648 Query: 441 RFSNNR 446 + R Sbjct: 649 EYRERR 654 >gi|209523462|ref|ZP_03272017.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328] gi|209496204|gb|EDZ96504.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328] Length = 622 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 83/407 (20%), Positives = 159/407 (39%), Gaps = 53/407 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ + G + P + + +LW SG YD Y + M Sbjct: 244 GLVFWHPKGSRMRLLIEDYWRQAHLQDGYELLYSPHIANLELWKTSGHYDFYRENMFDQI 303 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +++ P + ++SH+ SYR LP + ++ +R E G+MR R F Sbjct: 304 EIENQSYQLKPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYERSGVLHGLMRVRGFT 363 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ F L PE + +I G + + P +G D + Sbjct: 364 QDDAHIFCL-PEQVADEILGVLNLTEKILSDFGFSKYEVNLSTRPSKSVGNDAVWQLAT- 421 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D I + NT D ++ E A Y D+ K+ D+ Sbjct: 422 ---------------DALIAALNTKGWDYVT----DEGGGAFYGPKIDI---KIQDA--- 456 Query: 274 NKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 +G ++ T ++LP + + ADG M I G++ Sbjct: 457 ----------IGRLWQCSTIQVDFNLPERFNMEYVAADGSRQRPIMIHRAIFGSLERFFG 506 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ ++ G +W +AP ++ ++ + RD + I L + D+ GE+ Sbjct: 507 ILIENYAGDFPLW---LAPVQVRVLAVSDR---FRDYAQSIAQSLRQQNIRAEVDNTGER 560 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G Q ++L P+ V++G + + + + ++ R +G M+L ++ Sbjct: 561 LGKQIRNSELEKIPVTVVIGQRELDNQSLSVRTRSSGDLGTMTLPQL 607 >gi|294792093|ref|ZP_06757241.1| threonine--tRNA ligase [Veillonella sp. 6_1_27] gi|294457323|gb|EFG25685.1| threonine--tRNA ligase [Veillonella sp. 6_1_27] Length = 641 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 85/395 (21%), Positives = 158/395 (40%), Gaps = 47/395 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +I + G +LP G + + RE + E+ P + S LW SG +D Y Sbjct: 261 VIKEEGPGFPFFLPKGMALRNELENFWREVHHDFDYEEIRTPIILSKHLWETSGHWDHY- 319 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +E + +D+ P + ++++ + SYR+ P + ++ L R EL G+ Sbjct: 320 RENMYTTIIDDEEYAIKPMNCPGGILVYQNEMHSYRDFPLRYAELGLVHRHELSGALHGL 379 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSH 208 R R F DA+ F + P+ + K+ + RI+ + GLK + + + GD Sbjct: 380 FRVRAFTQDDAHVF-MLPDQMQTELMKVIELFDRIYSQFGLKYHVELSTKPDNAMGD--- 435 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + I A T + + + I + F Y D H E Sbjct: 436 DAIWEAATEALRNAIEAKGIPYVINPGDGAF----------------YGPKLDYHIE--- 476 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 DSL R + G I +LP + G DG+ H + + G+M Sbjct: 477 DSL-------GRTWQCGTI---QLDMNLPERFQIEYIGEDGQKHRPIMIHRACFGSMERF 526 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP ++ ++ I + H + ++ ++++ +V DD Sbjct: 527 IGILTEHYAGA---FPTWMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEV----DDR 579 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E+IG + A + P ++VG K V + V ++ Sbjct: 580 SEKIGYKIRQAQMAKVPYMLVVGDKEVEEGTVNVR 614 >gi|289423700|ref|ZP_06425499.1| proline--tRNA ligase [Peptostreptococcus anaerobius 653-L] gi|289155950|gb|EFD04616.1| proline--tRNA ligase [Peptostreptococcus anaerobius 653-L] Length = 481 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 77/362 (21%), Positives = 142/362 (39%), Gaps = 81/362 (22%) Query: 80 WVESGRYDSYGKEML--RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ- 136 WV G G ++L RLA R PT E ++ ++ + SYR LPF + Q Sbjct: 98 WVTQG-----GNKVLEERLAVR--------PTSETIICTMYAKWLNSYRQLPFLYNQWNS 144 Query: 137 -LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 +++ RP +R+ EFL ++ ++ T + + + +Y KS+ Sbjct: 145 VVRWEKSTRP---FLRTSEFLWQEGHTLHETEQEAIDETLQQLAAY---------KSV-- 190 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 ++D M P+ D S + +A Sbjct: 191 ----------------------------AEDLMAIPV------IDGRKSESEKFAGASAT 216 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 Y + +H+ K S G + G ++ TF +GK Sbjct: 217 YTIEAMMHDGKALQS--------------GTSHFLGQHFTKAFDITFSDREGKLANPYHT 262 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 S+GI + R++ +I D +G++ P +AP ++ +I I A+ + +K+ A L Sbjct: 263 SWGI-STRLIGGLIMVHSDNRGLVLPPKMAPTQVIIIPIAANKGGVMEVVDKVAADLKAK 321 Query: 376 GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD G +F A++ G P+++ +G K + ++ R + +MSL+ V Sbjct: 322 GISVEVDDRDNYSPGYKFNDAEMKGIPVRLEIGPKDIEKNQALAFRRDELTKSEMSLDTV 381 Query: 435 IN 436 ++ Sbjct: 382 VD 383 >gi|149280220|ref|ZP_01886343.1| prolyl-tRNA synthetase [Pedobacter sp. BAL39] gi|149229057|gb|EDM34453.1| prolyl-tRNA synthetase [Pedobacter sp. BAL39] Length = 490 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 76/149 (51%), Gaps = 5/149 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F +GK +V S+G+ + R++ A+I + D G+ Sbjct: 232 GKALQAGTSHFLGQNFAKAFDVKFTNKEGKIEHVWATSWGV-STRLMGALIMAHSDDAGL 290 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDA---CEKIYARLSKVGCDVFWDDMGEQ-IGSQFAV 394 + P +AP ++ ++ I D+ + +++ +L ++G V +DD Q G +FA Sbjct: 291 VLPPKLAPIQVVIVPIYKGDEELKKISSFVDELMPKLKRLGISVKYDDRDTQRPGFKFAE 350 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +L G P+++ +G + + + VE+ R T Sbjct: 351 YELKGVPIRLAIGGRDMENGTVELARRDT 379 Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust. Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query: 85 RYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 + D G ++ + ++ +I PT E ++ + ++ I+SYR+LP Q R E+R Sbjct: 98 KNDGNGNIIVDETAKLEEELIVRPTSETIIWNTYKGWIQSYRDLPLLINQWANVVRWEMR 157 Query: 145 PRFGVMRSREFLMKDAYS 162 R +R+ EFL ++ ++ Sbjct: 158 TRL-FLRTTEFLWQEGHT 174 >gi|91070150|gb|ABE11072.1| threonyl-tRNA synthetase [uncultured Prochlorococcus marinus clone HF10-11A3] Length = 638 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 82/382 (21%), Positives = 143/382 (37%), Gaps = 42/382 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + S G+ W P G + IR + +E+ P LW +SG ++ + Sbjct: 255 IQEESPGMIFWHPNGWTIYQVLEKYIRGILKKNDYLEIKTPQAVDKSLWEKSGHWEKFRD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +M A N I P + +F +KSY++LP + R+E G+M Sbjct: 315 DMFTTASENRTYAI-KPMNCPCHIQVFNQGLKSYKDLPIRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + + ++ G I ++ + P S E Sbjct: 374 RVRNFTQDDAHIF-CTEEQIQEEVSTFIDLVFEVYKTFGFDEIIIKLSTRPQKRVGSEEI 432 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ ++ +K+ P E + I + L D Sbjct: 433 WDKSEEALSKALDNKNLKWELQPGEGAFYGPKIEFS--------------------LKDC 472 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 L N+ I+V +S+P + AT+ + K + V + +G+ Sbjct: 473 L--NRVWQCGTIQVD--------FSMPIRLDATYVDINNEKRNPVMLHRAILGSFERFIG 522 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ ++ K IW +AP++I L++I + D C K L+ G D E+ Sbjct: 523 ILIEQYEAKFPIW---IAPYQIILLSITDRNI---DKCLKFNELLNNNGYRSKVDIRNEK 576 Query: 388 IGSQFAVADLLGFPLQVIVGSK 409 IG + A L PL ++G K Sbjct: 577 IGYKIREATLKRVPLIAVIGDK 598 >gi|81429010|ref|YP_396010.1| threonyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] gi|123742216|sp|Q38VT0|SYT_LACSS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78610652|emb|CAI55703.1| Threonyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] Length = 656 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 80/386 (20%), Positives = 155/386 (40%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G ++ I +++ G + P L + DL+ +SG +D Y ++M Sbjct: 263 GLPYWLPNGATIRRSIERYIIDKEVANGYEHVYTPILANLDLYKQSGHWDHYREDMFPPM 322 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + +++ H +SYR LP ++ + R E G+ R RE Sbjct: 323 DMGDGEMLELRPMNCPSHIQVYKHHPRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 382 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ + + + + ++ + R LS+ D Sbjct: 383 TLNDGHTF-VRPDQIQDEFKSILGLMIDVYADFNINDYTFR---------LSYR-----D 427 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M + D + L+ + E A Y DV + ++ Sbjct: 428 PANTEKYFDDDEMWNKAQAMLKGAMDDLGLDYVEAEGEAAFYGPKLDVQTKT---AMGNE 484 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F ++ L + G DG+ H M G + M A + + Sbjct: 485 ETLSTIQLD----FMLPERFDL----HYVGEDGEMHRPVMIHRGLVSTMERFTAYLTEIY 536 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP + +I +K + + D + I + K G V DD E++G + Sbjct: 537 KGAFPTW---LAPTQAVIIPVK--NDLHYDYAKNIKDEMIKRGLRVRIDDRNEKMGYKIR 591 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P ++VG + ++ + V ++ Sbjct: 592 EAQTSKIPYTLVVGDQELAQATVSVR 617 >gi|296388793|ref|ZP_06878268.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PAb1] Length = 640 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW SG + +Y + Sbjct: 255 LQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRILWERSGHWSNYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + + P + IF +KSYR+LP + R+E G+M Sbjct: 315 NMFTTSSESRDYAV-KPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E K L+++ G I M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTRPAKRVGSD 430 >gi|261212792|ref|ZP_05927076.1| threonyl-tRNA synthetase [Vibrio sp. RC341] gi|260837857|gb|EEX64534.1| threonyl-tRNA synthetase [Vibrio sp. RC341] Length = 642 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 85/397 (21%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR++ N G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S MD P I E A Y + L Sbjct: 433 ----EIWDKSEQALIDSLKAMDIPF--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVVVNITDKQA---DYAHEVAQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 576 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 612 >gi|172054921|ref|YP_001806248.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|171701202|gb|ACB54182.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] Length = 644 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 86/401 (21%), Positives = 155/401 (38%), Gaps = 41/401 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+ G + P + + +LW SG +D Y + M Sbjct: 267 GLVFWHPRGATMRYLIEDYWRKAHLDGGYELLYTPHVANLELWKTSGHFDFYRENMFDSM 326 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D ++A P + +++ + SYR P + ++ +R E G+MR R F Sbjct: 327 DIEEQAYQIKPMNCPFHVLTYKNDLHSYREFPLRWAELGTVYRYERSGVLHGLMRVRGFT 386 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F L + + + ++ +I G K + + P + E LA Sbjct: 387 QDDAHIFCLPTQIASEILGVLNLTE-KILSDFGFKDYEVNLSTRPEKSVGTDEGWELATQ 445 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + SK + +D + A Y D+ K+ D++ + Sbjct: 446 ALVEALNSKSW---------EYIED--------KGGGAFYGPKIDI---KIKDAIGRTWQ 485 Query: 277 VSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 S ++ ++LP + ADG M I G++ ++ ++ Sbjct: 486 CSTIQVD----------FNLPERFDMEYVAADGSRQRPIMIHRAIFGSLERFYGILIENY 535 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G +W +AP ++ L+ + + R+ E + A L + G V D GE++G Q Sbjct: 536 AGDFPLW---LAPIQLRLLPV---SEAQREYGEAVVATLKEAGYRVEIDCTGERLGKQIR 589 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 A+L P+ IVG+K V + I+ R G M L E+ Sbjct: 590 NAELEKIPVVAIVGNKEVETQSLSIRTRQQGDIGTMDLTEL 630 >gi|15597940|ref|NP_251434.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|116050734|ref|YP_790445.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|218891076|ref|YP_002439942.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] gi|254241197|ref|ZP_04934519.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 2192] gi|313107813|ref|ZP_07793987.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 39016] gi|22654141|sp|Q9I099|SYT_PSEAE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122259859|sp|Q02NP1|SYT_PSEAB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701406|sp|B7V188|SYT_PSEA8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|9948822|gb|AAG06132.1|AE004702_9 threonyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|115585955|gb|ABJ11970.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|126194575|gb|EAZ58638.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 2192] gi|218771301|emb|CAW27066.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] gi|310880489|gb|EFQ39083.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 39016] Length = 640 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW SG + +Y + Sbjct: 255 LQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRILWERSGHWSNYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + + P + IF +KSYR+LP + R+E G+M Sbjct: 315 NMFTTSSESRDYAV-KPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E K L+++ G I M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTRPAKRVGSD 430 >gi|82523876|emb|CAI78599.1| threonyl-tRNA synthetase [uncultured delta proteobacterium] Length = 631 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 93/407 (22%), Positives = 168/407 (41%), Gaps = 53/407 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +E + G ++ P L ++LW +SG +D Y +E + + Sbjct: 258 GMILWHPKGAMFRYLLEDFEIKEHLKRGYQKVIGPQLLRSELWKKSGHFDHY-RENMYFS 316 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++++ P + I++SHI SYR+LP ++++ R E G++R REF Sbjct: 317 EIDNQSYGIKPMNCLAHMLIYKSHIHSYRDLPIRYFELGTVHRHEKSGVLHGLLRVREFT 376 Query: 157 MKDAYSFDLTPEGSKHSYNKM--FVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFI 211 DA+ TPE + + F+ Y + G K I R E IG D E Sbjct: 377 QDDAHIL-CTPEQLDNEIKSILDFIKY--VMGIFGFKYEVEISTRPEHS-IGSDEDWERA 432 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 A + + T +D LN E A Y D KL D+L Sbjct: 433 TNA-------------LKSALEESGTGYD----LN---EGDGAFYGPKIDF---KLKDAL 469 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAV 328 + + ++LP ++ G DG K V + +GA+ + Sbjct: 470 DRKWQCAT----------IQCDFTLPERFELSYVGQDGVKYRPVMLHRVILGAIERFVGI 519 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G +W ++P + ++ + D+V + + +Y L V D E++ Sbjct: 520 LIEHYAGAFPVW---LSPVQAVILTVT--DRV-DEYAQNLYQELIDADIRVEMDIRNEKL 573 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + A L P +I+G K VS+ +V ++ R + ++++E+ I Sbjct: 574 GLKVREAQLQKIPYMLIIGDKEVSEKRVTLRCRDDKKQSELNIEDFI 620 >gi|269966330|ref|ZP_06180417.1| threonyl-tRNA synthetase [Vibrio alginolyticus 40B] gi|269829069|gb|EEZ83316.1| threonyl-tRNA synthetase [Vibrio alginolyticus 40B] Length = 485 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 90/422 (21%), Positives = 159/422 (37%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR + + G E+ P + LW SG +D Y Sbjct: 100 MQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDRVLWERSGHWDKYAD 159 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 160 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 218 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + N + + Y + G +I ++ + P +G D Sbjct: 219 RVRGFTQDDAHIFCTESQIQEEVTNCIKMVY-DTYQTFGFDNIVVKLSTRPEKRVGSD-- 275 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S + MD P I E A Y + L Sbjct: 276 ----EIWDQSEEALKQSLESMDIPY--------------EIQEGEGAFYGPKIEF---TL 314 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + + M I G++ Sbjct: 315 YDCLD-------RAWQCGTV---QLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLER 364 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + L+NI ++I +L K G D Sbjct: 365 FIGILIEEYAG---FFPTWLAPEQAVLMNITDKQS---GYVQEIVQKLQKSGIRAKADLR 418 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++VG + + ++ ++ R +++ I Y S+ Sbjct: 419 NEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISS 478 Query: 445 NR 446 + Sbjct: 479 RK 480 >gi|300214322|gb|ADJ78738.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Lactobacillus salivarius CECT 5713] Length = 649 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 82/386 (21%), Positives = 154/386 (39%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + +L+ +SG +D Y ++M Sbjct: 265 GLPYWMPNGATIRRVIERYIIDKEVAWGFQHVYTPVLANLNLYKQSGHWDHYREDMFPPM 324 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + ++ H +SYR LP ++ + R E G+ R RE Sbjct: 325 DMGDGEMLELRPMNCPSHIQVYNHHKRSYRELPLRIAELGMMHRYEKSGALTGLSRVREM 384 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D + F + P+ + + +++ + R LS+ D Sbjct: 385 TLNDGHDF-IEPDHIEDEIKTLIKLMTEVYNDFDITDYRFR---------LSYR-----D 429 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S+ D + L E A Y DV + +L Sbjct: 430 PKNTEKYFDDDEMWEKSQSKLKAAMDDMGLEYFEAEGEAAFYGPKIDVQTKT---ALGGE 486 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L + GADG++H M GI M A + + Sbjct: 487 ETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMVHRGIVSTMERFTAYLTEMY 538 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++ +I +K + + D + ++L G V DD E++G + Sbjct: 539 KGAFPTW---LAPHQVDIIPVK--NDLHMDYVNDLSSKLRAHGIRVTVDDRNEKMGYKIR 593 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A + P +++G + VS+ V ++ Sbjct: 594 QAQVNKIPYTLVIGDEEVSNGTVTVR 619 >gi|195147146|ref|XP_002014541.1| GL19239 [Drosophila persimilis] gi|198473694|ref|XP_001356405.2| GA18821 [Drosophila pseudoobscura pseudoobscura] gi|194106494|gb|EDW28537.1| GL19239 [Drosophila persimilis] gi|198138068|gb|EAL33469.2| GA18821 [Drosophila pseudoobscura pseudoobscura] Length = 754 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 84/409 (20%), Positives = 168/409 (41%), Gaps = 44/409 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G + P G + + I+ E + G E+ P + +A LW+ SG + Y + Sbjct: 369 HELSPGSCFFQPRGAHIYNTLMGFIKSEYRKRGFQEVISPNIYNAKLWMTSGHWQHYAEN 428 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +K + P + IF + +S+R LP + R+EL G+ R Sbjct: 429 MFSFEAEKEKFAL-KPMNCPGHCLIFDTRNRSWRELPLRMADFGVLHRNELSGALTGLTR 487 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F PE K S K + +L+ + + + + + P Sbjct: 488 VRRFQQDDAHIF-CAPEQIK-SEMKGCLEFLKHVYTIFGFTFQLVLSTRP-----EKYLG 540 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 L + + + +F +P + D A Y D+ + D+L Sbjct: 541 ELEQWNDAEKALEESLNEFGMPWKENPGDG------------AFYGPKIDI---TIMDAL 585 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIE 330 + + ++ F +++L + DG K V + +G++ + A++ Sbjct: 586 KRAHQCATIQLD----FQLPIRFNL----NYIADDGEKKRPVIIHRAILGSVERMIAILT 637 Query: 331 SSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYAR--LSKVGCDVFWDDMGEQ 387 ++ GK WP ++P ++ ++ + A+DQ + ++++A +S+ CD G+ Sbjct: 638 ENYAGK---WPFWLSPRQVMVVPVGPAYDQYAQTVKDQLHAAGFMSEADCDA-----GDT 689 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + + A L F ++VG K S + V ++ R + ++S+ E+I Sbjct: 690 MNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVSELIT 738 >gi|153827549|ref|ZP_01980216.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-2] gi|153829051|ref|ZP_01981718.1| threonyl-tRNA synthetase [Vibrio cholerae 623-39] gi|229514759|ref|ZP_04404220.1| threonyl-tRNA synthetase [Vibrio cholerae TMA 21] gi|229522960|ref|ZP_04412374.1| threonyl-tRNA synthetase [Vibrio cholerae TM 11079-80] gi|229526102|ref|ZP_04415506.1| threonyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|229527753|ref|ZP_04417144.1| threonyl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|254284959|ref|ZP_04959925.1| threonyl-tRNA synthetase [Vibrio cholerae AM-19226] gi|148875480|gb|EDL73615.1| threonyl-tRNA synthetase [Vibrio cholerae 623-39] gi|149738482|gb|EDM52878.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-2] gi|150424962|gb|EDN16739.1| threonyl-tRNA synthetase [Vibrio cholerae AM-19226] gi|229334115|gb|EEN99600.1| threonyl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|229336260|gb|EEO01278.1| threonyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|229340177|gb|EEO05185.1| threonyl-tRNA synthetase [Vibrio cholerae TM 11079-80] gi|229348739|gb|EEO13697.1| threonyl-tRNA synthetase [Vibrio cholerae TMA 21] gi|327485485|gb|AEA79891.1| Threonyl-tRNA synthetase [Vibrio cholerae LMA3894-4] gi|327485490|gb|AEA79896.1| Threonyl-tRNA synthetase [Vibrio cholerae LMA3894-4] Length = 642 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 85/397 (21%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR++ N G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S MD P I E A Y + L Sbjct: 433 ----EIWDKSEQALIDSLKAMDIPF--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVVVNITDKQA---DYAHEVAQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 576 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 612 >gi|154503764|ref|ZP_02040824.1| hypothetical protein RUMGNA_01588 [Ruminococcus gnavus ATCC 29149] gi|153795864|gb|EDN78284.1| hypothetical protein RUMGNA_01588 [Ruminococcus gnavus ATCC 29149] Length = 521 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/162 (22%), Positives = 78/162 (48%), Gaps = 1/162 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G +FG ++ ++ + K H V S+G+ + R++ A+I D G+ Sbjct: 266 GKALQSGTSHFFGNAFADAYGISYSDKENKLHSVYETSWGL-STRIIGAIIMVHGDDSGL 324 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP + +I I H + D ++ A L G DD + G +F+ +++ Sbjct: 325 VLPPHIAPVQTRVIPIAQHKEGVLDKANELLAALKAAGYRASIDDSEKSPGWKFSEQEMV 384 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G P ++ +G K + + +V + R T + ++++E+ S Sbjct: 385 GIPTRIEIGPKDIENGQVVVVRRDTREKIVVAMDELTEKLSE 426 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 10/139 (7%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG ++LP G +N+ A + + TG + +P L +L E + + E+ Sbjct: 79 KGCLNYLPNGYAIWENIQANLDKRFKETGVENVYLPVLIPENLLQKEKDHIEGFAPEVAW 138 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + + + PT E + D++ ++SYR+LP + Q L++ RP Sbjct: 139 VTHGGMEELQERFCIRPTSETLFCDLWSKTVQSYRDLPKVWNQWCSVLRWEKTTRP---F 195 Query: 150 MRSREFLMKDAYSFDLTPE 168 +RSREFL ++ ++ T E Sbjct: 196 LRSREFLWQEGHTIHATYE 214 >gi|254282289|ref|ZP_04957257.1| threonyl-tRNA synthetase [gamma proteobacterium NOR51-B] gi|219678492|gb|EED34841.1| threonyl-tRNA synthetase [gamma proteobacterium NOR51-B] Length = 643 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 7/152 (4%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ + G+ H + + G+ W P G + +RE+Q G E+ P Sbjct: 237 EAEKRDHRKIAKKLGLFHLQEEAPGMVFWHPAGWVIYQTIERYMREQQLAYGYEEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 L LW SG D + M L +D D A+ P + +F +KSYR+LP Sbjct: 297 LVDYSLWQRSGHADKFADGMFMLKSDERDFAV--KPMNCPCHIQVFNQGLKSYRDLPLRL 354 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + R+E G+MR R F+ DA+ F Sbjct: 355 AEFGSCHRNEPSGSLHGIMRVRGFVQDDAHIF 386 >gi|107102275|ref|ZP_01366193.1| hypothetical protein PaerPA_01003332 [Pseudomonas aeruginosa PACS2] Length = 621 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G +E+ P + LW SG + +Y + Sbjct: 236 LQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRILWERSGHWSNYAE 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + + P + IF +KSYR+LP + R+E G+M Sbjct: 296 NMFTTSSESRDYAV-KPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E K L+++ G I M+ + P +G D Sbjct: 355 RVRGFTQDDAHIF-CTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTRPAKRVGSD 411 >gi|329954516|ref|ZP_08295607.1| threonine--tRNA ligase [Bacteroides clarus YIT 12056] gi|328527484|gb|EGF54481.1| threonine--tRNA ligase [Bacteroides clarus YIT 12056] Length = 646 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 91/429 (21%), Positives = 157/429 (36%), Gaps = 67/429 (15%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L++ SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K + ++ +F + ++ + I Sbjct: 380 RSFTQDDAHIF-CRPDQVKDEFLRVMDIISIVFQSMHFENFEAQ--------------IS 424 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 L D + + D E W A + EK + Sbjct: 425 LRDKVNREKYIGSD-----------------------ENWEKAEQAIIEACEEKGLKAKV 461 Query: 273 ENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYG 318 E + G + +G + GT Y+LP + GAD + H V + Sbjct: 462 EYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAP 521 Query: 319 IGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 G+M R VA +IE + GK +W PD VA IS + D +++ L + Sbjct: 522 FGSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------EKFNDYAQEVKDYLKRY 572 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ E+IG + ++ P +IVG K + +V ++ + G + M E+ Sbjct: 573 DVRAIVDERNEKIGRKIRDNEMKRIPYMLIVGEKEAENREVSVRKQGEGDQGTMKFEDFA 632 Query: 436 NYASHRFSN 444 + N Sbjct: 633 KKVNEEVQN 641 >gi|260494526|ref|ZP_05814656.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_33] gi|260197688|gb|EEW95205.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_33] Length = 637 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/433 (20%), Positives = 178/433 (41%), Gaps = 52/433 (12%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + L + ++ G +LP G + + + R+E + G +++ P Sbjct: 236 EAEKRDHRKLGKELELFFLSEYGPGFPFFLPKGMIVRNVLVDLWRKEHEKAGYLQLETPI 295 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + + +LW SG + +Y +E + ++ ++ P + F+ + SY++LP Sbjct: 296 MLNKELWEISGHWFNY-RENMYTSEIDEVEFAIKPMNCPGGVLAFKHQLHSYKDLPARLA 354 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ R E G+MR R F D++ F +TP+ + +G+ + Sbjct: 355 ELGKVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEI-------------IGVVN 400 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 + + S G E+ + T + S++ D + D + I Sbjct: 401 LIDKFYSKLFG----FEYEIELSTKPEKAIGSQEIWDMAESALAGALDKLGRKYKINPGD 456 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG 307 A Y D K+ D+ +G ++ GT ++LP T+ G DG Sbjct: 457 GAFYGPKLDF---KIKDA-------------IGRMWQCGTIQLDFNLPERFDVTYIGEDG 500 Query: 308 KDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + H V + G++ ++ + G +W +AP ++ ++ I + C + Sbjct: 501 EKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMW---LAPVQVKVMTI---NDECVPYAK 554 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +I A+L ++G DD E IG + A+ P+Q+I+G V + +V I+ + Sbjct: 555 EIMAKLDELGIRAELDDRTETIGYKIREANGRYRIPMQLIIGKNEVENKEVNIRRFGSKD 614 Query: 426 REDMSLEEVINYA 438 + SL+E NY Sbjct: 615 QFSKSLDEFYNYV 627 >gi|210623133|ref|ZP_03293599.1| hypothetical protein CLOHIR_01549 [Clostridium hiranonis DSM 13275] gi|210153810|gb|EEA84816.1| hypothetical protein CLOHIR_01549 [Clostridium hiranonis DSM 13275] Length = 482 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/165 (22%), Positives = 83/165 (50%), Gaps = 2/165 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF +G + S+GI + R++ +I + D +G+ Sbjct: 226 GKALQSGTSHFLGQHFTKAFDITFADREGGMSHPYHTSWGI-STRLIGGLIMTHSDNRGL 284 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 + P +AP ++ +I I A+ + +++YA L + G V DD G + +++ Sbjct: 285 VLPPRIAPTQVMIIPIAANKGGVMEKVDELYAALKEKGARVEVDDRPNYSTGYKLNDSEM 344 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P+++ +G K + +++ + R T +E +SL+ ++ Y + F Sbjct: 345 KGIPVRIEIGPKDIENNQAMVFRRDTLEKEAVSLDNLVEYVTGLF 389 >gi|15601053|ref|NP_232683.1| threonyl-tRNA synthetase [Vibrio cholerae O1 biovar eltor str. N16961] gi|153817556|ref|ZP_01970223.1| threonyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|227811910|ref|YP_002811920.1| threonyl-tRNA synthetase [Vibrio cholerae M66-2] gi|229506559|ref|ZP_04396068.1| threonyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229510645|ref|ZP_04400125.1| threonyl-tRNA synthetase [Vibrio cholerae B33] gi|229517224|ref|ZP_04406669.1| threonyl-tRNA synthetase [Vibrio cholerae RC9] gi|229606038|ref|YP_002876742.1| threonyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254850514|ref|ZP_05239864.1| threonyl-tRNA synthetase [Vibrio cholerae MO10] gi|255745914|ref|ZP_05419861.1| threonyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262163529|ref|ZP_06031275.1| threonyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|298500133|ref|ZP_07009939.1| threonyl-tRNA synthetase [Vibrio cholerae MAK 757] gi|22654144|sp|Q9KMN7|SYT_VIBCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783545|sp|C3LUV8|SYT_VIBCM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|9657684|gb|AAF96196.1| threonyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126511981|gb|EAZ74575.1| threonyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|227011052|gb|ACP07263.1| threonyl-tRNA synthetase [Vibrio cholerae M66-2] gi|229345260|gb|EEO10233.1| threonyl-tRNA synthetase [Vibrio cholerae RC9] gi|229353090|gb|EEO18030.1| threonyl-tRNA synthetase [Vibrio cholerae B33] gi|229356910|gb|EEO21828.1| threonyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229372524|gb|ACQ62946.1| threonyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254846219|gb|EET24633.1| threonyl-tRNA synthetase [Vibrio cholerae MO10] gi|255735668|gb|EET91066.1| threonyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262028096|gb|EEY46755.1| threonyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|297542114|gb|EFH78165.1| threonyl-tRNA synthetase [Vibrio cholerae MAK 757] Length = 642 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 85/397 (21%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR++ N G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S MD P I E A Y + L Sbjct: 433 ----EIWDKSEQALIDSLKAMDIPF--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVVVNITDKQA---DYAHEVAQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 576 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 612 >gi|258625495|ref|ZP_05720387.1| threonyl-tRNA synthetase [Vibrio mimicus VM603] gi|258582201|gb|EEW07058.1| threonyl-tRNA synthetase [Vibrio mimicus VM603] Length = 642 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR++ N G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S M+ P I E A Y + L Sbjct: 433 ----EIWDKSEQALIDSLKAMEIPF--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP ++ ++NI D ++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQVVVVNITDKQA---DYAHEVAQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 576 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 612 >gi|238855713|ref|ZP_04646009.1| threonine--tRNA ligase [Lactobacillus jensenii 269-3] gi|260665499|ref|ZP_05866346.1| threonyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|282934764|ref|ZP_06340004.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1] gi|313471817|ref|ZP_07812309.1| threonine--tRNA ligase [Lactobacillus jensenii 1153] gi|238831659|gb|EEQ24000.1| threonine--tRNA ligase [Lactobacillus jensenii 269-3] gi|239528573|gb|EEQ67574.1| threonine--tRNA ligase [Lactobacillus jensenii 1153] gi|260560767|gb|EEX26744.1| threonyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|281301175|gb|EFA93479.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1] Length = 643 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 86/405 (21%), Positives = 164/405 (40%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + +++ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + E + + K+ + ++ + R LS+ D Sbjct: 379 TLNDGHTF-VALEQVQEEFAKILKLIMDVYKDFDITDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M D + L+ + E A Y D+ + +L + Sbjct: 424 PKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L ++ G DG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFDL----SYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N+ AH + + K+ L K G D E++G + Sbjct: 533 KGAFPTW---LAPEQVEIIPVNLDAHGEYAK----KVRDELLKHGFRAEVDFRNEKMGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G ++ + V ++ T +E MSL++ IN Sbjct: 586 IRESQTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSLDQFIN 630 >gi|160880797|ref|YP_001559765.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|160429463|gb|ABX43026.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 584 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 94/426 (22%), Positives = 169/426 (39%), Gaps = 47/426 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD +L L T M + G +LP G + + R+ R G +E+S P + Sbjct: 194 RDHRKLGKELELFTFM--EEGPGFPFFLPKGMVIKNLLLDYWRKLHEREGYVEISTPMML 251 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + +LW SG +D Y KE + +D+ P + ++ S +SY+ LP F ++ Sbjct: 252 NRNLWETSGHWDHY-KENMYQTKIDDEIYAIKPMNCPGGMLVYGSKPRSYKELPLRFGEL 310 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK--- 191 L R E + G+MR R F DA+ F +T E K + ++ + G Sbjct: 311 GLVHRHEKSGQLHGLMRVRCFTQDDAHLF-MTEEQIKDEIKGVVRLIDEVYKKFGFTYHV 369 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + R E+ IG E A + + + M+ P D Sbjct: 370 ELSTRPENS-IGSLEDWEIATDA------LKMALEEMELPYLINEGD------------- 409 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D H L DS+ + + ++ FG +Y GADG+ H Sbjct: 410 -GAFYGPKIDFH---LKDSIGRTWQCGSIQLDFQLPLRFGIEYI--------GADGEAHR 457 Query: 312 -VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + + G++ ++ + G+ +P +AP ++ ++ + + D + I Sbjct: 458 PIMIHRVIFGSIERFFGILIEHYAGR---FPTWLAPVQVKILTV---SEQFNDYAQDILM 511 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L + G V D E++G + A L P +I+G + + +V + +R G Sbjct: 512 ELKQQGIRVSLDSRSEKLGYKVREARLDKIPYVLIIGQMEMENKQVSVWNREEGDLGGYV 571 Query: 431 LEEVIN 436 +E++I+ Sbjct: 572 VEDLIS 577 >gi|332981193|ref|YP_004462634.1| Ser-tRNA(Thr) hydrolase [Mahella australiensis 50-1 BON] gi|332698871|gb|AEE95812.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Mahella australiensis 50-1 BON] Length = 637 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 93/453 (20%), Positives = 174/453 (38%), Gaps = 55/453 (12%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + +H+ G + P G + + R+E + Sbjct: 230 EYLTRIEEAKQRDHRKLGQELDLFS--LHEEGPGFPFFHPKGMIIRNVLEDFWRKEHRKH 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + +LW++SG +D Y K+ + +D+ P + +++ + S Sbjct: 288 GYEEIKTPIILNKELWIQSGHWDHY-KDNMYFTKIDDQDYAIKPMNCPGSMIMYKRTMHS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y+ LP ++ L R E G+MR R F DA+ F L + + + + Sbjct: 347 YKELPIRLCELGLVHRHEKSGVLHGLMRVRCFTQDDAHIFMLPSQVTDEIIG--VIDLID 404 Query: 184 IFHRL-GLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 F+ L G K + R E +G D E T +V K +D+ + + F Sbjct: 405 YFYSLFGFKYHVELSTRPEDS-MGTDEQWEMA----TEALKVALGKKGLDYKVNEGDGAF 459 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSL 296 Y D H E DS+ R + G I F ++ L Sbjct: 460 ----------------YGPKIDFHLE---DSI-------GRTWQCGTIQLDFQMPERFDL 493 Query: 297 PMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G D + H V + G++ A++ + G W +AP ++ ++ I Sbjct: 494 ----TYIGEDSEKHRPVMLHRVIFGSIERFIAILTEHYAGALPTW---LAPVQVKILPIT 546 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + + L ++ D+ E+IG + A + P +++G K V + Sbjct: 547 DR---SLEYARSLQMHLEELDIRTELDNRNEKIGYKIRAAQIEKVPYMLVIGDKEVENVA 603 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 V ++ R G MS+++ N + + + Sbjct: 604 VSVRSRSKGDMGSMSVDDFENLIKTEIKSKKAI 636 >gi|114776996|ref|ZP_01452016.1| threonyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] gi|114552517|gb|EAU54977.1| threonyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] Length = 634 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 91/433 (21%), Positives = 159/433 (36%), Gaps = 71/433 (16%) Query: 5 KYFLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L L+E AE H+ + ++ + H + + G+ W P G V IR Sbjct: 228 KAYLTRLEE----AEKRDHRKLAKSLDLFHLQEEAPGMIFWHPKGWSVWQQVENEIRGVM 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P + LW +SG +D + +EM + N I P + +F + Sbjct: 284 RDNGYQEIKTPQMVDRKLWEKSGHWDKFREEMFTTSTENRDYAI-KPMNCPCHIQVFNQN 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP + R+E G+MR R F+ DA+ F + N + ++ Sbjct: 343 LHSYRDLPLRLAEFGSCHRNEPSGTLHGLMRLRNFVQDDAHIFCTEAQIQDEVCNFIDLT 402 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y ++ R G + I L+D E +V TD Sbjct: 403 Y-DVYKRFGFDDV----------------IIFLSDRPEKRV--------------GTD-- 429 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEK--LFDSLPENKRVSARGIE------VGHIFYFGT 292 EQW AA + K + P IE +G ++ GT Sbjct: 430 ---------EQWDKAEAALHQALDSKGIEYGLNPGEGAFYGPKIEFSLKDCLGRVWQCGT 480 Query: 293 ---KYSLP--MSATFKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 +S+P + A + D + V + +G+M ++ ++GK W +AP Sbjct: 481 IQVDFSMPGKLDAEYVAEDSSRQTPVMLHRAILGSMERFIGILIEHYEGKFPFW---LAP 537 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 ++ NI D ++ + K G D E++G + L P ++ Sbjct: 538 VQVVACNIT---DAQADYVAEVTKSMHKAGFRAEMDLRNEKVGYKVRAHTLARVPYILVA 594 Query: 407 GSKFVSDSKVEIK 419 G + D + ++ Sbjct: 595 GDREREDGTISVR 607 >gi|331663198|ref|ZP_08364108.1| threonine--tRNA ligase [Escherichia coli TA143] gi|331683225|ref|ZP_08383826.1| threonine--tRNA ligase [Escherichia coli H299] gi|331058997|gb|EGI30974.1| threonine--tRNA ligase [Escherichia coli TA143] gi|331079440|gb|EGI50637.1| threonine--tRNA ligase [Escherichia coli H299] Length = 642 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 88/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 625 >gi|329577159|gb|EGG58629.1| threonine--tRNA ligase [Enterococcus faecalis TX1467] Length = 412 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 81/389 (20%), Positives = 158/389 (40%), Gaps = 40/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 29 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 88 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 89 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 148 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 149 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 193 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 194 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 250 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 251 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 302 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 303 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 355 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + P Q++VG K + D+ V ++ Sbjct: 356 KIRASQTQKVPYQLVVGDKEMEDATVNVR 384 >gi|313202757|ref|YP_004041414.1| ser-tRNA(thr) hydrolase; threonyL-tRNA synthetase [Paludibacter propionicigenes WB4] gi|312442073|gb|ADQ78429.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Paludibacter propionicigenes WB4] Length = 648 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 154/415 (37%), Gaps = 67/415 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + +++ Q R ++ P + + L+V SG Y YGK+ + Sbjct: 261 KGLPMWLPRGTALRLRLEDFLKKIQRRFDYQQVMTPHIGNKQLYVTSGHYAKYGKDSFQP 320 Query: 97 ADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ Y P + +I++ +SY+ LP + +R E G+ R R Sbjct: 321 IHTPEEGEEYLLKPMNCPHHCEIYKFKPRSYKELPVRLAEFGTVYRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K + K+ IF+ L ++ + I L Sbjct: 381 SFTQDDAHIF-CRPDQVKDEFLKVMDIIFIIFNALEFENFEAQ--------------ISL 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W + + EK + E Sbjct: 426 RDPNNREKYIGSD-----------------------ENWEKAEQSIIEACAEKGLKARVE 462 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP + G D + H V + Sbjct: 463 TGEAAFYGPKLDFMVRDAIGRKWQLGTIQVDYNLPERFELEYTGEDNQKHRPVMIHRAPF 522 Query: 320 GAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G+M R VA +IE + GK +W PD V IS + D +I ++ Sbjct: 523 GSMERFVAVLIEHTA-GKFPLWLTPDQVVILPIS--------EKFNDYAFQIAKEMNAQD 573 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 V DD E+IG + +L P +IVG K + +V ++ + G + M + Sbjct: 574 IRVQVDDRNEKIGRKIRDNELKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKV 628 >gi|257087763|ref|ZP_05582124.1| threonyl-tRNA synthetase [Enterococcus faecalis D6] gi|256995793|gb|EEU83095.1| threonyl-tRNA synthetase [Enterococcus faecalis D6] Length = 645 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 382 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 427 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 484 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 536 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVRNYS 644 >gi|90961470|ref|YP_535386.1| threonyl-tRNA synthetase [Lactobacillus salivarius UCC118] gi|122993083|sp|Q1WUN2|SYT_LACS1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|90820664|gb|ABD99303.1| Threonyl-tRNA synthetase [Lactobacillus salivarius UCC118] Length = 649 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 82/386 (21%), Positives = 154/386 (39%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + +L+ +SG +D Y ++M Sbjct: 265 GLPYWMPNGATIRRVIERYIIDKEVAWGFQHVYTPVLANLNLYKQSGHWDHYREDMFPPM 324 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + ++ H +SYR LP ++ + R E G+ R RE Sbjct: 325 DMGDGEMLELRPMNCPSHIQVYNHHKRSYRELPLRIAELGMMHRYEKSGALTGLSRVREM 384 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D + F + P+ + + +++ + R LS+ D Sbjct: 385 TLNDGHDF-IEPDHIEDEIKTLIKLMTEVYNDFDITDYRFR---------LSYR-----D 429 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S+ D + L E A Y DV + +L Sbjct: 430 PKNTEKYFDDDEMWEKSQSKLKAAMDDMGLEYFEAEGEAAFYGPKIDVQTKT---ALGGE 486 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L + GADG++H M GI M A + + Sbjct: 487 ETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMVHRGIVSTMERFTAYLTEMY 538 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++ +I +K + + D + ++L G V DD E++G + Sbjct: 539 KGAFPTW---LAPHQVDIIPVK--NDLHMDYVNDLSSKLRAHGIRVTVDDRNEKMGYKIR 593 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A + P +++G + VS+ V ++ Sbjct: 594 QAQVNKIPYTLVIGDEEVSNGTVTVR 619 >gi|325845496|ref|ZP_08168787.1| proline--tRNA ligase [Turicibacter sp. HGF1] gi|325488515|gb|EGC90933.1| proline--tRNA ligase [Turicibacter sp. HGF1] Length = 476 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 82/407 (20%), Positives = 163/407 (40%), Gaps = 75/407 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG P G +N+ + ++ TG + +P L + L E+ + + E+ Sbjct: 36 KGCMIIRPYGYAIWENIQQYLDQKFKETGHENVYMPMLIPESLLQKEADHVEGFAPEVAW 95 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + ++ + ++ PT E + D + I+SY +LP + Q +++ RP Sbjct: 96 VTHGGNEKLSERLVVRPTSETLFCDHYSKIIQSYNDLPKKYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ T E ++ M +Y ++ Sbjct: 153 LRTTEFLWQEGHTVHATAEEAEEETLLMLNTYAKM------------------------- 187 Query: 210 FIVLADTGETQVFCSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 ++F+ P+ + T+ + A Y S +H+ K Sbjct: 188 --------------CEEFLAIPVLKGQKTEKEKFAGAQ-------ATYTIESLMHDGKAL 226 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 S G FGT ++ + + K Y S+G+ R++ A+ Sbjct: 227 QS--------------GTSHNFGTGFAKAFDIKYSDKNSKMQYAHQTSWGV-TTRLIGAI 271 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQ 387 I D G++ P VAP ++ +I I AH + V ACE + RL+ V V D + Sbjct: 272 IMVHGDSSGLVLPPRVAPTQVMIIPIAAHKEGVIEKACE-LQTRLASVA-RVKCDTSDKT 329 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F+ ++ G P++V +G K + +++ + R T + +SL+++ Sbjct: 330 PGWKFSEYEMKGIPVRVEIGPKDIENNQAVLVRRDTREKIIVSLDDL 376 >gi|262164341|ref|ZP_06032079.1| threonyl-tRNA synthetase [Vibrio mimicus VM223] gi|262026721|gb|EEY45388.1| threonyl-tRNA synthetase [Vibrio mimicus VM223] Length = 642 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 85/397 (21%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR++ N G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S MD P I E A Y + L Sbjct: 433 ----EIWDKSEQALIDSLKAMDIPF--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVVVNITDKQA---DYAHEVAQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 576 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 612 >gi|256960954|ref|ZP_05565125.1| threonyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256951450|gb|EEU68082.1| threonyl-tRNA synthetase [Enterococcus faecalis Merz96] Length = 645 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 382 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 427 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 484 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 536 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 644 >gi|195578689|ref|XP_002079196.1| GD23818 [Drosophila simulans] gi|194191205|gb|EDX04781.1| GD23818 [Drosophila simulans] Length = 747 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 84/409 (20%), Positives = 170/409 (41%), Gaps = 44/409 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G + P G + + I+ E + G E+ P + +A LW+ SG ++ Y + Sbjct: 362 HELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNIYNAKLWMTSGHWEHYAEN 421 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +K + P + IF + +S+R LP + R+EL G+ R Sbjct: 422 MFSFEAEKEKFAL-KPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLTR 480 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F PE K S K + +L+ + + S + + P + Sbjct: 481 VRRFQQDDAHIF-CAPEQIK-SEMKGCLEFLKYVYTIFGFSFQLVLSTRP-----DNYLG 533 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 L + + ++ +F +P + D A Y D+ + D+L Sbjct: 534 ELEQWNDAEKALAESLNEFGMPWKENPGDG------------AFYGPKIDI---TIMDAL 578 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIE 330 + + ++ F +++L ++ DG K V + +G++ + A++ Sbjct: 579 KRAHQCATIQLD----FQLPIRFNL----SYIADDGEKKRPVIIHRAILGSVERMIAILT 630 Query: 331 SSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIY--ARLSKVGCDVFWDDMGEQ 387 + GK WP ++P ++ ++ + A+DQ + ++++ +S+ CD G+ Sbjct: 631 ENFAGK---WPFWLSPRQVMVVPVGPAYDQYAQAVRDQLHDAGFMSEADCDA-----GDT 682 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + + A L F ++VG K S + V ++ R + ++S+ E+I Sbjct: 683 MNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELIT 731 >gi|195351005|ref|XP_002042027.1| GM26732 [Drosophila sechellia] gi|194123851|gb|EDW45894.1| GM26732 [Drosophila sechellia] Length = 747 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 84/409 (20%), Positives = 170/409 (41%), Gaps = 44/409 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G + P G + + I+ E + G E+ P + +A LW+ SG ++ Y + Sbjct: 362 HELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNIYNAKLWMTSGHWEHYAEN 421 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +K + P + IF + +S+R LP + R+EL G+ R Sbjct: 422 MFSFEAEKEKFAL-KPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLTR 480 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F PE K S K + +L+ + + S + + P + Sbjct: 481 VRRFQQDDAHIF-CAPEQIK-SEMKGCLEFLKYVYTIFGFSFQLVLSTRP-----DNYLG 533 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 L + + ++ +F +P + D A Y D+ + D+L Sbjct: 534 ELEQWNDAEKALAESLNEFGMPWKENPGDG------------AFYGPKIDI---TIMDAL 578 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIE 330 + + ++ F +++L ++ DG K V + +G++ + A++ Sbjct: 579 KRAHQCATIQLD----FQLPIRFNL----SYIADDGEKKRPVIIHRAILGSVERMIAILT 630 Query: 331 SSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIY--ARLSKVGCDVFWDDMGEQ 387 + GK WP ++P ++ ++ + A+DQ + ++++ +S+ CD G+ Sbjct: 631 ENFAGK---WPFWLSPRQVMVVPVGPAYDQYAQAVRDQLHDAGFMSEADCDA-----GDT 682 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + + A L F ++VG K S + V ++ R + ++S+ E+I Sbjct: 683 MNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELIT 731 >gi|156974364|ref|YP_001445271.1| threonyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116] gi|166225516|sp|A7N009|SYT_VIBHB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|156525958|gb|ABU71044.1| hypothetical protein VIBHAR_02079 [Vibrio harveyi ATCC BAA-1116] Length = 642 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 152/397 (38%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ +R + + G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFVRSKLDEYGYQEVKGPLIMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSEN-REYALKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + N + + Y + G +I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIFCTESQIQEEVTNCIKMVY-DTYQTFGFDNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S + M+ P I E A Y + L Sbjct: 433 ----EIWDQSEEALKQSLESMEIPY--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP ++ L+NI D +++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQVILMNITDKQS---DYVQEVVQKLQKSGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + ++ ++ R Sbjct: 576 NEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTR 612 >gi|153808043|ref|ZP_01960711.1| hypothetical protein BACCAC_02329 [Bacteroides caccae ATCC 43185] gi|149129652|gb|EDM20866.1| hypothetical protein BACCAC_02329 [Bacteroides caccae ATCC 43185] Length = 646 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 94/432 (21%), Positives = 158/432 (36%), Gaps = 73/432 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRLRLQDFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + +I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F P+ K +LR+ + + Sbjct: 380 RSFTQDDAHIF-CRPDQVKD-------EFLRVMDIISI---------------------- 409 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFD 269 VF S +F +F D ++ + + W A + EK Sbjct: 410 --------VFRSMNFQNF---EAQISLRDKVNREKYIGSDDNWEKAEQAIIEACEEKGLP 458 Query: 270 SLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMG 315 + E + G + +G + GT Y+LP + G+D + H V + Sbjct: 459 AKIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIH 518 Query: 316 SYGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 G+M R VA +IE + GK +W P+ V IS + D E++ L Sbjct: 519 RAPFGSMERFVAVLIEHTA-GKFPLWLTPEQVVILPIS--------EKFNDYAEQVKMYL 569 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 DD E+IG + ++ P +IVG K + +V ++ + G + M E Sbjct: 570 KTHEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFE 629 Query: 433 EVINYASHRFSN 444 E + N Sbjct: 630 EFAKILNEEVQN 641 >gi|257885297|ref|ZP_05664950.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257821149|gb|EEV48283.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,501] Length = 645 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 83/389 (21%), Positives = 155/389 (39%), Gaps = 40/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 260 GLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPM 319 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLVLRPMNCPHHMMVYKNTIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 425 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTE 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 482 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 533 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I ++ AH D +I RL G V DD E++G Sbjct: 534 YKGAFPTW---LAPIQATIIPVSVDAHG----DYAYEIKERLQTKGLRVEVDDRNEKMGY 586 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + P Q++VG K + D+ V ++ Sbjct: 587 KIRASQTQKIPYQLVVGDKELEDATVNVR 615 >gi|257421590|ref|ZP_05598580.1| threonyl-tRNA synthetase [Enterococcus faecalis X98] gi|257163414|gb|EEU93374.1| threonyl-tRNA synthetase [Enterococcus faecalis X98] Length = 645 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 382 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 427 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 484 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 536 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 644 >gi|256763421|ref|ZP_05504001.1| threonyl-tRNA synthetase [Enterococcus faecalis T3] gi|256958077|ref|ZP_05562248.1| threonyl-tRNA synthetase [Enterococcus faecalis DS5] gi|257079964|ref|ZP_05574325.1| threonyl-tRNA synthetase [Enterococcus faecalis JH1] gi|256684672|gb|EEU24367.1| threonyl-tRNA synthetase [Enterococcus faecalis T3] gi|256948573|gb|EEU65205.1| threonyl-tRNA synthetase [Enterococcus faecalis DS5] gi|256987994|gb|EEU75296.1| threonyl-tRNA synthetase [Enterococcus faecalis JH1] Length = 645 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 382 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 427 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 484 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 536 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 644 >gi|29377326|ref|NP_816480.1| threonyl-tRNA synthetase [Enterococcus faecalis V583] gi|255971805|ref|ZP_05422391.1| threonyl-tRNA synthetase [Enterococcus faecalis T1] gi|256854147|ref|ZP_05559512.1| threonyl-tRNA synthetase [Enterococcus faecalis T8] gi|73919789|sp|Q830D0|SYT_ENTFA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|29344793|gb|AAO82550.1| threonyl-tRNA synthetase [Enterococcus faecalis V583] gi|255962823|gb|EET95299.1| threonyl-tRNA synthetase [Enterococcus faecalis T1] gi|256711090|gb|EEU26133.1| threonyl-tRNA synthetase [Enterococcus faecalis T8] gi|323481721|gb|ADX81160.1| threonyl-tRNA synthetase [Enterococcus faecalis 62] Length = 645 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 81/389 (20%), Positives = 158/389 (40%), Gaps = 40/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 382 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 427 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 484 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 536 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + P Q++VG K + D+ V ++ Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVR 617 >gi|156839714|ref|XP_001643545.1| hypothetical protein Kpol_1008p26 [Vanderwaltozyma polyspora DSM 70294] gi|156114160|gb|EDO15687.1| hypothetical protein Kpol_1008p26 [Vanderwaltozyma polyspora DSM 70294] Length = 674 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 71/338 (21%), Positives = 134/338 (39%), Gaps = 70/338 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + I+SYR+LP Q R E + +R+REFL ++ ++ L Sbjct: 277 PTSETVMYPYYAKWIQSYRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTVFLNE 336 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + ++ ++ Y ++ L ++P +V E + F DF Sbjct: 337 KEAQEEVLQILDFYAGVYEEL--LAVP----------------VVKGKKTEKEKFAGGDF 378 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + VE + +P+ + RGI+ Sbjct: 379 ------------------TTTVEGY------------------IPQ----TGRGIQGATS 398 Query: 288 FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 + G +S + + + G DH + S+G+ + RV+ ++ D KG++ P V Sbjct: 399 HHLGQNFSKMFNLSVENPLGPDHPKIFAYQNSWGL-STRVIGVMVMIHSDNKGLVIPPRV 457 Query: 345 APFKISLINIKAHDQVCRDACEKIY-------ARLSKVGCDVFWD-DMGEQIGSQFAVAD 396 + F+ ++ + + + +KI+ +RL K F D + G +FA + Sbjct: 458 SQFQAVVVPVGITKKTSEEQRKKIHEAARDVESRLKKSDVRAFGDYNDNYTPGWKFAQYE 517 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L G PL+V +G K + +S+V + R + + L E+ Sbjct: 518 LKGIPLRVEMGPKDIEESQVTVVRRNDSRKYTVKLSEL 555 >gi|297279894|ref|XP_002808285.1| PREDICTED: LOW QUALITY PROTEIN: threonyl-tRNA synthetase, mitochondrial-like [Macaca mulatta] Length = 669 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 104/434 (23%), Positives = 168/434 (38%), Gaps = 72/434 (16%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E R G E+ PT Sbjct: 247 EAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPT 306 Query: 74 LQSADLWVESGRYDSYGKEMLRL----ADRNDKA------------MIYGPTHEEVMTDI 117 L S LW +SG ++ Y ++M + +DR + + P + + Sbjct: 307 LFSTKLWEQSGHWEHYQEDMFAVQPSGSDRPASSQSDDSTRHTTDILALKPMNCPAHCLM 366 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-----GSK 171 F +S+R LP R E G+ R R F DA+ F T + S Sbjct: 367 FAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSC 426 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + + + L RL L + P SG +G L D E QV + +F Sbjct: 427 LDFLRSVYAVLGFSFRLALSTRP----SGFLGDP------CLWDQAE-QVL-QRALKEFG 474 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 P + D A Y DVH L D+L R + G I Sbjct: 475 EPWDLNSGDG------------AFYGPKIDVH---LHDAL-------GRPHQCGTI---Q 509 Query: 292 TKYSLPM--SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 + LP+ +KG G + V + +G++ + V+ S GK WP ++PF+ Sbjct: 510 LDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGGK---WPLWLSPFQ 566 Query: 349 ISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + +I + ++ R+A + + A D D G + + A L + Q +VG Sbjct: 567 VVVIPVGTEQEEYAREAQQSLRAAGLVSDLDA---DSGLTLSRRIRRAQLAHYNFQFVVG 623 Query: 408 SKFVSDSKVEIKHR 421 K S V I+ R Sbjct: 624 QKEQSKRTVNIRTR 637 >gi|256963904|ref|ZP_05568075.1| threonyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|256954400|gb|EEU71032.1| threonyl-tRNA synthetase [Enterococcus faecalis HIP11704] Length = 645 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 382 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 427 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 484 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 536 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 644 >gi|71033673|ref|XP_766478.1| threonyl-tRNA synthetase [Theileria parva strain Muguga] gi|68353435|gb|EAN34195.1| threonyl-tRNA synthetase, putative [Theileria parva] Length = 779 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 2/130 (1%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 HS G WLP G K + + +R+ G E+ P + S DLW +SG YD+Y KE + Sbjct: 395 HSPGSCFWLPNGAKIYNRLVEFMRDNYRIRGYQEVITPNIFSCDLWKQSGHYDNY-KENM 453 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 L + D P + +F+ SY+ LP + R+EL G+ R R Sbjct: 454 YLFNLEDTEWGMKPMNCPGHCLMFKHLFLSYKQLPLRLADFGVLHRNELTGSLSGLTRVR 513 Query: 154 EFLMKDAYSF 163 F DA+ F Sbjct: 514 RFQQDDAHIF 523 >gi|330720856|gb|EGG99050.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC2047] Length = 639 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 96/445 (21%), Positives = 162/445 (36%), Gaps = 63/445 (14%) Query: 2 RRSKYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E + RD + KL L + + + G+ W G V +R+ Sbjct: 227 KQLKKYLNFLEEASKRDHRKLAKKLDLFH--LQEEAPGMVFWHAKGWSIYQTVEQYMRKV 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ G E+ P L LW SG D +G EM N K P + +F Sbjct: 285 QHDNGYQEIKTPQLVDFSLWERSGHADKFGDEMFSSHSEN-KDYAVKPMNCPCHVQVFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++SYR+LP + R+E G+MR R F+ DA+ F E F+ Sbjct: 344 GLRSYRDLPLRLAEFGCCHRNEPSGTLQGLMRVRGFVQDDAHIF--CAESQIQDEVASFI 401 Query: 180 SYL-RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ G + ++ + P S E A+ +K P E Sbjct: 402 DLLYSVYQDFGFDDVLVKLSTRPEKRVGSDEVWDKAEEALQLALDNKGIAWELQPGEGAF 461 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYS 295 + I + L D L G ++ GT +S Sbjct: 462 YGPKIEFS--------------------LRDCL-------------GRVWQCGTIQVDFS 488 Query: 296 LP--MSATFKGADGKD------HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 +P + A + DG H +GS+ R + +IE +P +AP Sbjct: 489 MPGRLDAQYVAEDGSRQVPVMLHRAILGSF----ERFIGILIEHFAGA----FPAWLAPE 540 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + +++NI + C + L G VF D E+IG + + P ++VG Sbjct: 541 QAAIVNITDSQA---EYCRNVEKTLRNKGFRVFSDLRNEKIGFKIREHSIQKIPYVLVVG 597 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLE 432 K + ++ ++ + MS+E Sbjct: 598 DKEMEAGQIAVRTQKGEDLGSMSIE 622 >gi|295109529|emb|CBL23482.1| prolyl-tRNA synthetase, family I [Ruminococcus obeum A2-162] Length = 477 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 82/405 (20%), Positives = 153/405 (37%), Gaps = 70/405 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG + P G +N+ + TG + +P + + L E + + E+ Sbjct: 36 KGCMAIKPAGYAIWENIQHELDSRFKETGVQNVYMPMFIPESLLQKEKDHVEGFAPEVAW 95 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + + + + PT E + D ++ I+S+R+LP + Q +++ RP Sbjct: 96 VTHGGLNELQERLCVRPTSETLFCDFYQKDIQSHRDLPKVYNQWCSVVRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +RSREFL ++ ++ T E ++ +M Y Sbjct: 153 LRSREFLWQEGHTAHATAEEAEERTIQMLNLY---------------------------- 184 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 AD FC + I + TD + A Y S +H+ K Sbjct: 185 ----AD------FCEEVLAIPVIKGQKTDKEKFAGA-------VATYTIESLMHDGKALQ 227 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 S G FG ++ + D YV S+G+ R++ A+I Sbjct: 228 S--------------GTSHNFGDGFAKAFGIQYTDKDNTLKYVHQTSWGM-TTRMIGAII 272 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 D G++ P +AP + +I I+ + + ++++A L G V DD G Sbjct: 273 MVHGDNSGLVLPPRIAPTQAVIIPIQQRKEGVLEKADELFAALKAAGIRVKVDDTDRSPG 332 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +FA ++ G P+++ G K + + + I R T + +S +E+ Sbjct: 333 FKFAEQEMRGIPVRIECGPKDIENGQAVICRRDTREKYVVSFDEL 377 >gi|293382457|ref|ZP_06628392.1| threonine--tRNA ligase [Enterococcus faecalis R712] gi|293387159|ref|ZP_06631720.1| threonine--tRNA ligase [Enterococcus faecalis S613] gi|312906512|ref|ZP_07765514.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|312910456|ref|ZP_07769302.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|291080141|gb|EFE17505.1| threonine--tRNA ligase [Enterococcus faecalis R712] gi|291083430|gb|EFE20393.1| threonine--tRNA ligase [Enterococcus faecalis S613] gi|310627455|gb|EFQ10738.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|311289228|gb|EFQ67784.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] Length = 660 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 277 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 336 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 442 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 499 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 550 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 551 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 603 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 659 >gi|218548710|ref|YP_002382501.1| threonyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|226701412|sp|B7LQ71|SYT_ESCF3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|218356251|emb|CAQ88868.1| threonyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|324113470|gb|EGC07445.1| threonyl-tRNA synthetase [Escherichia fergusonii B253] Length = 642 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 88/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 625 >gi|315026573|gb|EFT38505.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2137] Length = 660 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 277 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 336 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 442 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 499 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 550 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 551 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 603 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVRNYS 659 >gi|307286857|ref|ZP_07566939.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|306502072|gb|EFM71358.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|315156485|gb|EFU00502.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0043] gi|315166285|gb|EFU10302.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1302] gi|315169145|gb|EFU13162.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1341] Length = 660 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 277 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 336 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 442 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 499 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 550 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 551 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 603 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 659 >gi|282850470|ref|ZP_06259849.1| threonine--tRNA ligase [Veillonella parvula ATCC 17745] gi|282579963|gb|EFB85367.1| threonine--tRNA ligase [Veillonella parvula ATCC 17745] Length = 636 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 86/405 (21%), Positives = 159/405 (39%), Gaps = 67/405 (16%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +I + G +LP G + + RE + E+ P + S LW SG +D Y Sbjct: 256 VIKEEGPGFPFFLPKGMALRNELENFWREVHHDFDYEEIRTPIILSKHLWETSGHWDHY- 314 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +E + +D+ P + ++++ + SYR+ P + ++ L R EL G+ Sbjct: 315 RENMYTTIIDDEEYAIKPMNCPGGILVYQNEMHSYRDFPLRYAELGLVHRHELSGALHGL 374 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSH 208 R R F DA+ F + P+ + K+ + RI+ + GLK + + + GD + Sbjct: 375 FRVRAFTQDDAHVF-MLPDQMQTELMKVIELFDRIYSQFGLKYHVELSTKPDNAMGDDA- 432 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS-------- 260 I + TD +L + +E PY Sbjct: 433 -----------------------IWEQATD-----ALRNAIEAKGIPYVINPGDGAFYGP 464 Query: 261 --DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMG 315 D H E DSL R + G I +LP + G DG+ H + + Sbjct: 465 KLDYHIE---DSL-------GRTWQCGTI---QLDMNLPERFQIEYIGEDGQKHRPIMIH 511 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSK 374 G+M ++ + G +P +AP ++ ++ I + H + ++ ++++ + Sbjct: 512 RACFGSMERFIGILTEHYAGA---FPTWMAPVQVKILPISEKHVEYAKELAKQMHRDYVR 568 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V DD E+IG + A + P ++VG K V + V ++ Sbjct: 569 VEV----DDRSEKIGYKIRQAQMAKVPYMLVVGDKEVEEGTVNVR 609 >gi|224539835|ref|ZP_03680374.1| hypothetical protein BACCELL_04745 [Bacteroides cellulosilyticus DSM 14838] gi|224518545|gb|EEF87650.1| hypothetical protein BACCELL_04745 [Bacteroides cellulosilyticus DSM 14838] Length = 519 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 95/431 (22%), Positives = 159/431 (36%), Gaps = 73/431 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + +R Q R E+ P + + L++ SG Y YGK+ + Sbjct: 134 KGLPMWLPKGTALRLRLQEFLRRIQARYDYQEVITPPIGNKLLYITSGHYAKYGKDSFQP 193 Query: 97 ADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ Y P + I+++ +SY++LP + R E G+ R R Sbjct: 194 IHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRVR 253 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K +LR+ + + SI R+ Sbjct: 254 SFTQDDAHIF-CRPDQVKD-------EFLRV---MDIISIVFRS---------------- 286 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV---EQWTAPYAATSDVHNEKLFDS 270 MDF D ++ + E W + + EK + Sbjct: 287 --------------MDFANVEAQISLRDKVNREKYIGSDENWERAEQSIIEACEEKGLSA 332 Query: 271 LPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGS 316 E + G + +G + GT Y+LP + GAD + H V + Sbjct: 333 RIEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYTGADNQKHRPVMIHR 392 Query: 317 YGIGAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 G+M R VA +IE + GK +W P+ VA IS + D +++ L Sbjct: 393 APFGSMERFVAVLIEHTA-GKFPLWLTPEQVAILPIS--------EKFNDYAQEVKKFLK 443 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + D+ E+IG + +L P +IVG K + +V ++ + G + M EE Sbjct: 444 QYDIRAIVDERNEKIGRKIRDNELKRIPYMLIVGEKEAENREVSVRKQGEGDKGTMKFEE 503 Query: 434 VINYASHRFSN 444 + N Sbjct: 504 FAKILNEEVQN 514 >gi|161528166|ref|YP_001581992.1| prolyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] gi|160339467|gb|ABX12554.1| prolyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] Length = 480 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/203 (20%), Positives = 91/203 (44%), Gaps = 15/203 (7%) Query: 243 ISLNSIVEQWTAPYAATSDVHNEK----LFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 I N++ E+ P EK ++ + E+ + +++G + G +S P Sbjct: 184 IYKNTVEEELAIPVTTGKKSEKEKFVGAVYTTTMESIMPDGKALQMGTSHFLGQNFSKPF 243 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 F D +H+ S+G+ + R++ A+I + D +G++ P VAP ++ ++ I +D Sbjct: 244 EVKFADKDNVEHFAWQTSWGV-SWRLIGAMIMAHGDDQGLVLPPKVAPTQVVIVPIYRND 302 Query: 359 Q-------VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + ++ E + A+ +V D D G G +F ++ G P+++ +G K + Sbjct: 303 EGRDKVLPKVKEIQESLEAKDIRVQVD---DRQGLSPGYKFNDWEMKGVPIRIEIGPKDI 359 Query: 412 SDSKVEIKHRLTGIREDMSLEEV 434 + + R + ++ E+ Sbjct: 360 EKQSIVVAKRYNREKTNLQFSEI 382 >gi|331085681|ref|ZP_08334764.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406604|gb|EGG86109.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 643 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 101/447 (22%), Positives = 174/447 (38%), Gaps = 51/447 (11%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L T I + G +LP G + + RE R Sbjct: 229 EYLAKIEEAKKRDHRKLGKELGLFT--ILEEGPGFPIFLPKGMILKNTLIDYWREVHTRA 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+S P + + LW SG + Y + M + D D A+ P + ++++ Sbjct: 287 GYVEISTPIMLNKQLWETSGHWAHYKENMYTTVIDEEDFAI--KPMNCPGGILVYKTEPH 344 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++ R E G+MR R F DA+ F +T E K + Sbjct: 345 SYRDLPLRMGELGTVHRHEKSGALHGLMRVRSFTQDDAHIF-MTREQIKDEIKGVARLID 403 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G K + V T S++ D + + D++ Sbjct: 404 EVYSLFGFK------------------YHVELSTKPEDSMGSQEDWDIATDALRSALDEL 445 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SA 300 I E A Y D H E D+L R + G I + LP+ Sbjct: 446 QLPYVINEGDGAFYGPKIDFHLE---DTL-------GRTWQCGTI---QLDFQLPLRFEM 492 Query: 301 TFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 + ADG+ H + + G++ R + +IE +P +AP ++ ++ I + + Sbjct: 493 EYIAADGEKHRPIMVHRVVFGSIERFIGILIEHFAGA----FPTWLAPEQVKVLPISEKY 548 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + K+ + +K+ C V D+ E+IG + A L P ++VG+K + V Sbjct: 549 HEYANEVAAKL--KEAKIRCSV--DERSEKIGYKIRDARLNKIPYMLVVGAKEQEEGVVS 604 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSN 444 ++ R G SL+ I + N Sbjct: 605 VRSRFLGDEGQRSLDTFIAEITEEIKN 631 >gi|329963564|ref|ZP_08301043.1| proline--tRNA ligase [Bacteroides fluxus YIT 12057] gi|328528553|gb|EGF55524.1| proline--tRNA ligase [Bacteroides fluxus YIT 12057] Length = 497 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 84/163 (51%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I + ++ EK I A+L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNAEMLAKIDEKVAGIVAKLKSMGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ G P+++++G + + ++ +EI R T +E S E + Y Sbjct: 355 YEVKGVPVRLVMGGRDLENNTMEIMRRDTLEKETRSCEGIEEY 397 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWINSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|315033108|gb|EFT45040.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0017] Length = 672 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 81/389 (20%), Positives = 158/389 (40%), Gaps = 40/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 289 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 348 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 349 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 408 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 409 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 453 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 454 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 510 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 511 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 562 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 563 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 615 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + P Q++VG K + D+ V ++ Sbjct: 616 KIRASQTQKVPYQLVVGDKEMEDATVNVR 644 >gi|257420184|ref|ZP_05597178.1| threonyl-tRNA synthetase [Enterococcus faecalis T11] gi|257162012|gb|EEU91972.1| threonyl-tRNA synthetase [Enterococcus faecalis T11] Length = 645 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 382 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 427 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 484 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 536 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 644 >gi|255974800|ref|ZP_05425386.1| threonyl-tRNA synthetase [Enterococcus faecalis T2] gi|256616698|ref|ZP_05473544.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|257081588|ref|ZP_05575949.1| threonyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|257084237|ref|ZP_05578598.1| threonyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|257417026|ref|ZP_05594020.1| threonyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|255967672|gb|EET98294.1| threonyl-tRNA synthetase [Enterococcus faecalis T2] gi|256596225|gb|EEU15401.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256989618|gb|EEU76920.1| threonyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|256992267|gb|EEU79569.1| threonyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|257158854|gb|EEU88814.1| threonyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] gi|295113730|emb|CBL32367.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Enterococcus sp. 7L76] Length = 645 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 81/389 (20%), Positives = 158/389 (40%), Gaps = 40/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 382 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 427 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 484 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 536 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + P Q++VG K + D+ V ++ Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVR 617 >gi|227890560|ref|ZP_04008365.1| threonyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|227867498|gb|EEJ74919.1| threonyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] Length = 649 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 82/386 (21%), Positives = 154/386 (39%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + +L+ +SG +D Y ++M Sbjct: 265 GLPYWMPNGATIRRVIERYIIDKEVAWGFQHVYTPVLANLNLYKQSGHWDHYREDMFPPM 324 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + ++ H +SYR LP ++ + R E G+ R RE Sbjct: 325 DMGDGEMLELRPMNCPSHIQVYNHHKRSYRELPLRIAELGMMHRYEKSGALTGLSRVREM 384 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D + F + P+ + + +++ + R LS+ D Sbjct: 385 TLNDGHDF-IEPDHIEDEIKTLIKLMTEVYNDFDITDYRFR---------LSYR-----D 429 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S+ D + L E A Y DV + +L Sbjct: 430 PKNTEKYFDDDEMWEKSQSKLKAAMDDMGLEYFEAEGEAAFYGPKIDVQTKT---ALGGE 486 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L + GADG++H M GI M A + + Sbjct: 487 ETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMVHRGIVSTMERFTAYLTEMY 538 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++ +I +K + + D + ++L G V DD E++G + Sbjct: 539 KGAFPTW---LAPHQVDIIPVK--NDLHMDYVNDLSSKLRAHGIRVTVDDRNEKMGYKIR 593 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A + P +++G + VS+ V ++ Sbjct: 594 QAQVNKIPYTLVIGDEEVSNGTVTVR 619 >gi|153803259|ref|ZP_01957845.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-3] gi|124121199|gb|EAY39942.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-3] Length = 516 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 85/397 (21%), Positives = 146/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR + N G E+ P + LW SG +D Y Sbjct: 131 MQQEAPGMVFWHHNGWSVFRDLEIFIRHKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 190 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 191 AMFTTSSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 249 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 250 RVRGFTQDDAHIF-CTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTRPEKRVGSD-- 306 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S MD P I E A Y + L Sbjct: 307 ----EIWDKSEQALIDSLKAMDIPF--------------EIQEGEGAFYGPKIEF---TL 345 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + M I G++ Sbjct: 346 YDCLD-------RAWQCGTV---QLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLER 395 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++ +L K G D Sbjct: 396 FIGILIEEYAG---FFPTWLAPEQAVVVNITDKQA---DYAHEVAQKLQKCGIRAKADLR 449 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 450 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 486 >gi|312198148|ref|YP_004018209.1| threonyl-tRNA synthetase [Frankia sp. EuI1c] gi|311229484|gb|ADP82339.1| threonyl-tRNA synthetase [Frankia sp. EuI1c] Length = 411 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 90/397 (22%), Positives = 155/397 (39%), Gaps = 58/397 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + IR + R G + P L +L+ SG + Y +M Sbjct: 23 GLPYWLPDGATVRHTLEEYIRAVERRAGYQHVYSPVLGKRELYEISGHWSHYSDDMFPPM 82 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + ++ P+ I+RS SYR LP ++ +R EL G+ R R Sbjct: 83 DLGGEQVVLRPSLCPHHALIYRSRSHSYRELPLRIAELGGMYRSELSGVLGGLTRVRAIQ 142 Query: 157 MKDAYSFDLTPEGS----------KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 + DA+ F + + +H+Y + ++ R +RL L GP G Sbjct: 143 LNDAHIFCTLEQVADEARAALDLIRHAYEALGLTPSR--YRLSLP--------GPGG--- 189 Query: 207 SHEFIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 +++ D V + +D +P E + + A Y DV Sbjct: 190 --KYVAAPDLWRRSVALLTEVLDRSGLPYEAAEGE------------AAFYGPKIDV--- 232 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRV 324 ++ D +S I+ F+ ++ L + G DG H V + IG++ Sbjct: 233 QVTDGAGRESTLSTVQID----FHQPERFDL----RYVGPDGARHRPVMVHRSIIGSVER 284 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 A + H G W +AP ++ ++ I A + A + A L + V D Sbjct: 285 AVAHLLEQHGGALPAW---LAPIQLVILPISASELPAAVALTRRCADLG-LRAQVLGPDR 340 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +G++ +A L+ P Q ++G+K SD V ++ R Sbjct: 341 G-SLGARVRLARLV--PYQAVLGAKEASDGHVSLRLR 374 >gi|84998192|ref|XP_953817.1| threonyl-tRNA synthetase [Theileria annulata] gi|65304814|emb|CAI73139.1| threonyl-tRNA synthetase, putative [Theileria annulata] Length = 743 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 2/130 (1%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 HS G WLP G K + + +R+ G E+ P + S DLW +SG YD+Y KE + Sbjct: 343 HSPGSCFWLPNGAKIYNRLVEFMRDNYRVRGYQEVITPNIFSCDLWKQSGHYDNY-KENM 401 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 L + D P + +F+ SY+ LP + R+EL G+ R R Sbjct: 402 YLFNLEDTEWGMKPMNCPGHCLMFKHLFLSYKQLPLRLADFGVLHRNELTGSLSGLTRVR 461 Query: 154 EFLMKDAYSF 163 F DA+ F Sbjct: 462 RFQQDDAHIF 471 >gi|327536012|gb|AEA94846.1| threonine--tRNA ligase [Enterococcus faecalis OG1RF] Length = 660 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 277 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 336 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 442 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 499 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 550 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 551 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 603 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 659 >gi|325497120|gb|EGC94979.1| threonyl-tRNA synthetase [Escherichia fergusonii ECD227] Length = 652 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 88/411 (21%), Positives = 154/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y Sbjct: 266 MQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 326 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 384 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 385 RVRGFTQDDAHIF-CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 441 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 442 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 480 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 481 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 530 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +LS G V D Sbjct: 531 FIGILTEEFAG---FFPTWLAPVQVVIMNITDSQS---EYVNELTQKLSNAGIRVKADLR 584 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 585 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVI 635 >gi|315148859|gb|EFT92875.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4244] Length = 660 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 277 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 336 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 442 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 499 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 550 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 551 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 603 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 659 >gi|307272094|ref|ZP_07553357.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|306511210|gb|EFM80217.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0855] Length = 660 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 277 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 336 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 442 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 499 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 550 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 551 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 603 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 659 >gi|294779531|ref|ZP_06744926.1| threonine--tRNA ligase [Enterococcus faecalis PC1.1] gi|300861074|ref|ZP_07107161.1| threonine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|307268336|ref|ZP_07549717.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|307276154|ref|ZP_07557285.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|294453410|gb|EFG21817.1| threonine--tRNA ligase [Enterococcus faecalis PC1.1] gi|300850113|gb|EFK77863.1| threonine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|306507148|gb|EFM76287.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|306515362|gb|EFM83896.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|315036305|gb|EFT48237.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0027] Length = 660 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 277 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 336 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 442 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 499 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 550 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 551 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 603 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 659 >gi|227554282|ref|ZP_03984329.1| threonyl-tRNA synthetase [Enterococcus faecalis HH22] gi|229544818|ref|ZP_04433543.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|307289786|ref|ZP_07569723.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|227176572|gb|EEI57544.1| threonyl-tRNA synthetase [Enterococcus faecalis HH22] gi|229310090|gb|EEN76077.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|306499171|gb|EFM68649.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|315030800|gb|EFT42732.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4000] gi|315575247|gb|EFU87438.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0309B] gi|315582393|gb|EFU94584.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0309A] Length = 660 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 277 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 336 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 442 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 499 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 550 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 551 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 603 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 659 >gi|167957340|ref|ZP_02544414.1| glycyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7c] Length = 473 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 85/350 (24%), Positives = 147/350 (42%), Gaps = 70/350 (20%) Query: 100 NDKAMIY--GPTHEEVMTDIFRSHIKS-YRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 ND ++ Y T + + T+ F++ + S Y NLPF Q FR+E+ PR V RSREF Sbjct: 180 NDASISYLRPETAQGIFTN-FKNVVDSFYPNLPFGIAQQGKAFRNEIAPRDFVFRSREFE 238 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 + F + PE + +++++ S LGLK + HE V A Sbjct: 239 QMEIEYF-VDPEHWQEAFDELLASTHAFLAELGLKP------------EHIHELDVPA-- 283 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 E + SK +D ++D I ++ Y D+ N +R Sbjct: 284 -EDRAHYSKKTIDI-------EYDYPIGCEELM---GIAYRTDFDLMN---------IQR 323 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGK--DHYVQMGSYGIGAMRVVAAVI----- 329 S + +E T KG + K H ++ G R + AV+ Sbjct: 324 ASGKSMEY----------------TVKGTNTKFVPHVIEPS---FGVERALMAVLSGAYR 364 Query: 330 ESSHDGKGIIW---PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD-VFWDDMG 385 E +G+ ++ P+ +AP K ++ + + + ++YA+L+K V WDD G Sbjct: 365 EDEQNGEKRVYLALPEHLAPVKFAVSPLLKNKPELVEKAREVYAQLAKANPGRVMWDDNG 424 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 IG ++ D +G P V+V + + D V ++ R T + + +EE++ Sbjct: 425 -NIGKRYRRQDEIGTPHCVVVDFQTLEDGTVTVRERDTTEQRRVKVEELL 473 >gi|90417791|ref|ZP_01225703.1| threonyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] gi|90337463|gb|EAS51114.1| threonyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] Length = 659 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 12/206 (5%) Query: 7 FLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + + G W P G + + + +R Q Sbjct: 236 YLHMLEE----AEKRDHRRLGREMDLFHFQEDAPGTVFWHPKGWRLYQTLVSYVRRRQEA 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E++ P L LW SG ++ Y ++M +++ P + IF+ +K Sbjct: 292 EGYQEVNAPQLLERSLWETSGHWEKYHEDMFVTETEDERVFALKPMNCPGHVQIFKHGLK 351 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R E G+MR R F DA+ F T E K+ L Sbjct: 352 SYRDLPLKIAEFGAVHRYEPSGALHGLMRVRAFTQDDAHVF-CTEEQITAESLKINDLIL 410 Query: 183 RIFHRLGLKSIPMRAESGP---IGGD 205 I+ G + + ++ + P +G D Sbjct: 411 SIYRDFGFEDVLVKLSTRPEKRVGSD 436 >gi|157803434|ref|YP_001491983.1| threonyl-tRNA synthetase [Rickettsia canadensis str. McKiel] gi|166225493|sp|A8EXW5|SYT_RICCK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157784697|gb|ABV73198.1| threonyl-tRNA synthetase [Rickettsia canadensis str. McKiel] Length = 635 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + ++G+ W G + V IR++ + G E+ P L LW SG ++ + Sbjct: 256 QEEAQGMVFWHDKGWSIYNIVEQYIRKKIRKNGYTEVKTPVLVDKRLWEASGHWEKFRDN 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M L + ++K + P + IF+ IKSYR+LP + L R+E G+MR Sbjct: 316 MFAL-EADNKILALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGLMR 374 Query: 152 SREFLMKDAYSF 163 R + DA+ F Sbjct: 375 VRSLVQDDAHIF 386 >gi|315158985|gb|EFU03002.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0312] Length = 660 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 277 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 336 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 442 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 499 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 550 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 551 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 603 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 659 >gi|309805541|ref|ZP_07699586.1| anticodon binding domain protein [Lactobacillus iners LactinV 09V1-c] gi|309807191|ref|ZP_07701165.1| anticodon binding domain protein [Lactobacillus iners LactinV 03V1-b] gi|309808834|ref|ZP_07702719.1| anticodon binding domain protein [Lactobacillus iners LactinV 01V1-a] gi|315653429|ref|ZP_07906351.1| proline--tRNA ligase [Lactobacillus iners ATCC 55195] gi|308165192|gb|EFO67430.1| anticodon binding domain protein [Lactobacillus iners LactinV 09V1-c] gi|308166412|gb|EFO68617.1| anticodon binding domain protein [Lactobacillus iners LactinV 03V1-b] gi|308167960|gb|EFO70093.1| anticodon binding domain protein [Lactobacillus iners LactinV 01V1-a] gi|315489354|gb|EFU78994.1| proline--tRNA ligase [Lactobacillus iners ATCC 55195] Length = 106 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 8/106 (7%) Query: 340 WPDSVAPFKISLI--NIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 WP VAPF+I +I N+K +Q V E+I++ DV +DD E+ G +F AD Sbjct: 5 WPKEVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSD----KYDVLYDDRNERPGVKFNDAD 60 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 L+G P+++IVG + VS+ VE+K +MSL+ + Y S Sbjct: 61 LIGAPIRIIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKEL 105 >gi|297579610|ref|ZP_06941537.1| threonyl-tRNA synthetase [Vibrio cholerae RC385] gi|297535256|gb|EFH74090.1| threonyl-tRNA synthetase [Vibrio cholerae RC385] Length = 642 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 85/397 (21%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR++ N G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S MD P I E A Y + L Sbjct: 433 ----EIWDKSEQALIDSLKAMDIPF--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAIVVNITDKQA---DYAHEVAQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 576 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 612 >gi|317131189|ref|YP_004090503.1| threonyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] gi|315469168|gb|ADU25772.1| threonyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] Length = 645 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 84/432 (19%), Positives = 160/432 (37%), Gaps = 58/432 (13%) Query: 15 PRDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIR 58 P+ AE+ +H ML H+K G+ LP G + L + + Sbjct: 224 PKKAELDAHITMLEEARKRDHNKLGRELGFFTTVDYIGQGLPVMLPKGSRVLQLLQRFVE 283 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD--RNDKAMIYGPTHEEVMTD 116 +E+ + G + P L +DL+ SG +D Y M L D ++D+ P Sbjct: 284 DEEEKRGYLLTKTPLLAKSDLYKISGHWDHYRDGMFVLGDEEKDDEVFALRPMTCPFQFQ 343 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 ++ + +SYR+LP + FR+E G++R R+F + + + P+ + + Sbjct: 344 VYLNKKRSYRDLPMRLGETSTLFRNEASGEMHGLIRVRQFTISEGH-IACRPDQLEEEFK 402 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + +GL D+S+ F + + + + + Sbjct: 403 GCVDLANFMLKTVGLDE------------DVSYRFSKWDENDRDKYIGTSEQWEEVQDRM 450 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF---DSLPENKRVSARGIEVGHIFYFGT 292 DD+ + A Y D+ +F D+L I V F Sbjct: 451 RNILDDLGIQYTEASGEAAFYGPKLDIQIRNVFGKEDTL----------ITVQIDFQLAK 500 Query: 293 KYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ + + T DG++ Y + IG A++ + G W +AP ++ + Sbjct: 501 RFEMKYTDT----DGQEKYPYVIHRTSIGCYERTLALLIEKYAGAMPTW---LAPEQVRV 553 Query: 352 INI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + I + H+ + EK+ A G D E+IG + A L P ++ G + Sbjct: 554 LPISEKHEAYAQPVLEKLRA----AGLRATVDQRNEKIGYRIREAQLEKVPYMLVAGDRE 609 Query: 411 VSDSKVEIKHRL 422 + V ++ R+ Sbjct: 610 AEEGTVSVRARV 621 >gi|260219598|emb|CBA26443.1| Threonyl-tRNA synthetase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 665 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 85/384 (22%), Positives = 147/384 (38%), Gaps = 46/384 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I +HS G W P G V +R+ G +E+ P + LW ++G +D Y + Sbjct: 284 IDEHSPGTVFWHPKGWTLWQGVEQYMRKVYQDNGYLEVKGPQIIDKSLWEKTGHWDKYRE 343 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M +++ D A+ P + I++ IKSYR+LP F + R+E G+ Sbjct: 344 NMFTTESEKRDYAL--KPMNCPGHILIYKQGIKSYRDLPLRFGEFGQCHRNEPSGGLHGI 401 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGGDLSH 208 MR R F D + F E K F + L +++ G +I + + P + Sbjct: 402 MRVRAFTQDDGHIF--CTEDQIQDEVKAFTTLLQKVYKDFGFTNIIYKLSTRPEKRIGTE 459 Query: 209 EFIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A+ + + DF +P E + I ++ + P+ + ++ Sbjct: 460 EGWDRAENALAEGLRASG-CDFEYLPGEGAFYGPKIEY-TLKDALGRPWQCGTI----QV 513 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVV 325 +LPE + A F G DG H V + +G++ R + Sbjct: 514 DPNLPER-----------------------LDAEFVGEDGSRHRPVMLHRAIVGSLERFI 550 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE S P +AP +++++NI D + L G V D Sbjct: 551 GILIEESAGA----LPAWLAPVQVAVLNIT---DAQADYARSVAKTLQNQGLRVHLDLRN 603 Query: 386 EQIGSQFAVADLLGFPLQVIVGSK 409 E+I + + P V++G K Sbjct: 604 EKITYKIREHSMQKLPYLVVIGDK 627 >gi|186685902|ref|YP_001869098.1| threonyl-tRNA synthetase [Nostoc punctiforme PCC 73102] gi|186468354|gb|ACC84155.1| threonyl-tRNA synthetase [Nostoc punctiforme PCC 73102] Length = 611 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 8/166 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ W P G + +++EQ + G + + P + DL+ SG + Y ++M L Sbjct: 225 GLPLWTPKGTLLRSTLEDFLKQEQVKRGYLSVVTPHIARVDLFKTSGHWQKYKEDMFPLM 284 Query: 97 -----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 A ++ + P + I++S ++SYR LP + +R E G+ Sbjct: 285 ADDEEAAAQEQGFVMKPMNCPFHIQIYKSELRSYRELPMRLAEFGTVYRYEQSGELGGLT 344 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R R F + D++ F +TPE + + L +F++L LK+ R Sbjct: 345 RVRGFTVDDSHLF-VTPEQLDSEFLSVVDLILSVFNKLQLKNFKAR 389 Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust. Identities = 30/146 (20%), Positives = 66/146 (45%), Gaps = 9/146 (6%) Query: 294 YSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 Y+LP + DG + V + G++ + ++ + G +W +AP + Sbjct: 460 YNLPERFELEYVAEDGVRKRPVMIHRAPFGSLERLIGILIEEYAGDFPLW---LAPVQAR 516 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 L+ + D + + A++ +G D G+++G Q A+ P+ +VG+K Sbjct: 517 LLPV---GDTQLDFAKDVVAKMRALGIRAEVDTSGDRLGKQIRNAEKEKIPVMAVVGAKE 573 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVIN 436 V + + I+ R +G + ++EV++ Sbjct: 574 VETNTLSIRTRASGELGVIPVDEVVD 599 >gi|262394487|ref|YP_003286341.1| threonyl-tRNA synthetase [Vibrio sp. Ex25] gi|262338081|gb|ACY51876.1| threonyl-tRNA synthetase [Vibrio sp. Ex25] Length = 642 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 90/422 (21%), Positives = 159/422 (37%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR + + G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + N + + Y + G +I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIFCTESQIQEEVTNCIKMVY-DTYQTFGFDNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S + MD P I E A Y + L Sbjct: 433 ----EIWDQSEEALKQSLESMDIPY--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + L+NI ++I +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVLMNITDKQS---GYVQEIVQKLQKSGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++VG + + ++ ++ R +++ I Y S+ Sbjct: 576 NEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISS 635 Query: 445 NR 446 + Sbjct: 636 RK 637 >gi|220928798|ref|YP_002505707.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10] gi|219999126|gb|ACL75727.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 645 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 85/436 (19%), Positives = 168/436 (38%), Gaps = 33/436 (7%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y + + RD +L L T + + +G+ +P G + + + + +E+ R Sbjct: 229 EEYVTKLEEAKKRDHNKLGRELELFT-TVEEIGQGLPLLMPKGARIVQTLQRFVEDEEER 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD--RNDKAMIYGPTHEEVMTDIFRSH 121 G + P + +DL+ SG + Y M L D ++++ M P I+ + Sbjct: 288 RGYVLTKTPLMAKSDLYKLSGHWQHYKDGMFLLGDEEKDEEVMALRPMTCPFQFMIYNTK 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP + + FR+E G++R R+F + + + TPE + + + Sbjct: 348 LHSYRDLPIRYGETSTLFRNEASGEMHGLIRVRQFTISEGH-LVCTPEQLEDEFKGV--- 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + I E+ I D+++ F + + +++ + T D Sbjct: 404 ---------VDLIKFMMETLGIQDDVTYRFSKWDPKNKEKYIGNEEDWENVQDQMRTILD 454 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + E A Y D+ + + K + ++V F L M Sbjct: 455 HLKIDYKEAEGEAAFYGPKLDIQCKNV-----HGKEDTIITVQVD----FALAERLNMVY 505 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 K + K Y+ + IG A++ + G W V + L++ K H Sbjct: 506 VDKNNEKKHPYI-IHRTSIGCYERTLAILIEKYAGAFPTWLCPVQAKILPLVD-KHH--- 560 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ L G V D E+IG + A + P +++G K + ++ V ++ Sbjct: 561 --DFAQKVAQMLRDKGVKVEVDTRNEKIGYKIREAQMEKIPYMLVIGDKEMENNAVSVRS 618 Query: 421 RLTGIREDMSLEEVIN 436 R G M E+ ++ Sbjct: 619 RKDGDLGAMPAEQFVD 634 >gi|134295547|ref|YP_001119282.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4] gi|166223329|sp|A4JDU4|SYT_BURVG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|134138704|gb|ABO54447.1| Ser-tRNA(Thr) hydrolase [Burkholderia vietnamiensis G4] Length = 635 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 81/396 (20%), Positives = 151/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ DA+ F + ++N + +S ++ G + I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEDQFIAESIAFNTLAMS---VYKDFGFEHIDIKLSLRPEQRA 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + E A+ G + +P E A Y + H Sbjct: 428 GTDETWDRAEQGLRDALTACGLTWQELPGEG-----------------AFYGPKIEYH-- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 + D+L + + +++ G +Y + + V + +G+M Sbjct: 469 -IKDALGRSWQCGTLQLDMVLPERLGAEY-------VAEDNSRRRPVMLHRAIVGSMERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H G +W +APF+ ++NI A Q + + + L K G V D Sbjct: 521 LGILIEHHAGAMPVW---LAPFQAIVLNI-AESQA--EYAQSLAQTLQKQGVRVAADLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P ++VG K V ++ R Sbjct: 575 EKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRAR 610 >gi|325661884|ref|ZP_08150505.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|325471862|gb|EGC75079.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] Length = 643 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 101/447 (22%), Positives = 174/447 (38%), Gaps = 51/447 (11%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L T I + G +LP G + + RE R Sbjct: 229 EYLAKIEEAKKRDHRKLGKELGLFT--ILEEGPGFPIFLPKGMILKNTLIDYWREVHTRA 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+S P + + LW SG + Y + M + D D A+ P + ++++ Sbjct: 287 GYVEISTPIMLNRQLWETSGHWAHYKENMYTTVIDEEDFAI--KPMNCPGGILVYKTEPH 344 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++ R E G+MR R F DA+ F +T E K + Sbjct: 345 SYRDLPLRMGELGTVHRHEKSGALHGLMRVRSFTQDDAHIF-MTREQIKDEIKGVARLID 403 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G K + V T S++ D + + D++ Sbjct: 404 EVYSLFGFK------------------YHVELSTKPEDSMGSQEDWDIATDALRSALDEL 445 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SA 300 I E A Y D H E D+L R + G I + LP+ Sbjct: 446 QLPYVINEGDGAFYGPKIDFHLE---DTL-------GRTWQCGTI---QLDFQLPLRFEM 492 Query: 301 TFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAH 357 + ADG+ H + + G++ R + +IE +P +AP ++ ++ I + + Sbjct: 493 EYIAADGEKHRPIMVHRVVFGSIERFIGILIEHFAGA----FPTWLAPEQVKVLPISEKY 548 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + K+ + +K+ C V D+ E+IG + A L P ++VG+K + V Sbjct: 549 HEYANEVAAKL--KEAKIRCSV--DERSEKIGYKIRDARLNKIPYMLVVGAKEQEEGVVS 604 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSN 444 ++ R G SL+ I + N Sbjct: 605 VRSRFLGDEGQRSLDTFIAEITEEIKN 631 >gi|315171869|gb|EFU15886.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1342] Length = 660 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 277 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 336 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 442 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 499 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 550 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 551 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 603 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 659 >gi|25013040|gb|AAN71609.1| RH56418p [Drosophila melanogaster] gi|220950596|gb|ACL87841.1| Aats-thr-PB [synthetic construct] Length = 711 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 84/409 (20%), Positives = 169/409 (41%), Gaps = 44/409 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G + P G + + I+ E + G E+ P + +A LW+ SG + Y + Sbjct: 325 FHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNIYNAKLWMTSGHWQHYAE 384 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M +K + P + IF + +S+R LP + R+EL G+ Sbjct: 385 NMFSFEAEKEKFAL-KPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLT 443 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F PE K S K + +L+ + + S + + P + Sbjct: 444 RVRRFQQDDAHIF-CAPEQIK-SEMKGCLEFLKYVYTIFGFSFQLVLSTRP-----DNYL 496 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 L + + ++ +F +P + D A Y D+ + D+ Sbjct: 497 GELEQWNDAEKALAESLNEFGMPWKENPGDG------------AFYGPKIDI---TIMDA 541 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVI 329 L + + ++ F +++L ++ DG K V + +G++ + A++ Sbjct: 542 LKRAHQCATIQLD----FQLPIRFNL----SYIADDGEKKRPVIIHRAILGSVERMIAIL 593 Query: 330 ESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIY--ARLSKVGCDVFWDDMGE 386 + GK WP ++P ++ ++ + A+DQ + ++++ +S+ CD G+ Sbjct: 594 TENFAGK---WPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDA-----GD 645 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + + A L F ++VG K S + V ++ R + ++S+ E+I Sbjct: 646 TMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELI 694 >gi|308173840|ref|YP_003920545.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|307606704|emb|CBI43075.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] Length = 642 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 6/157 (3%) Query: 16 RDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 ++AE +H+ + L+ M + + G+ +LP GQ + + + +R +Q+ E+ P Sbjct: 238 KEAEKRNHRKLGAELQLFMFSEEAPGMPFYLPNGQFIRNTLESFLRSKQDAYHYQEVRTP 297 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + + LW +SG +D Y KE + ++ + + P + IF+ ++SYR LP Sbjct: 298 MMMNQRLWEQSGHWDHY-KENMYFSEADQQRFALKPMNCPGHMLIFKERLRSYRELPIRM 356 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 + R E G++R R F DA+ F +TPE Sbjct: 357 AEFGQVHRHEFSGALNGLLRVRSFCQDDAHIF-VTPE 392 >gi|299537091|ref|ZP_07050394.1| prolyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] gi|298727332|gb|EFI67904.1| prolyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] Length = 478 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 80/162 (49%), Gaps = 5/162 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + + ++ G Y GTK++ + + + YV S+G + R++ +VI D +G Sbjct: 214 NGKAVQAGTSHYLGTKFAEAFNIKYLNKANQHEYVHTTSWGT-STRLIGSVIMVHGDEQG 272 Query: 338 IIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 ++ P +AP ++ LI + K + Q+ + ++I+A L G V DD + G +F Sbjct: 273 LVLPPRIAPTQVVLIPVGPWKKNPQIM-EHLDEIFAALKAKGIRVRLDDSDQSPGYKFNE 331 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +L G P++V +G + + + + +K R + + L +I Sbjct: 332 WELKGVPVRVELGPRDLENKQALLKARDEEEKRTVELASIIT 373 >gi|21428938|gb|AAM50188.1| GH20022p [Drosophila melanogaster] Length = 747 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 84/409 (20%), Positives = 169/409 (41%), Gaps = 44/409 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G + P G + + I+ E + G E+ P + +A LW+ SG + Y + Sbjct: 362 HELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNIYNAKLWMTSGHWQHYAEN 421 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +K + P + IF + +S+R LP + R+EL G+ R Sbjct: 422 MFSFEAEKEKFAL-KPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLTR 480 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F PE K S K + +L+ + + S + + P + Sbjct: 481 VRRFQQDDAHIF-CAPEQIK-SEMKGCLEFLKYVYTIFGFSFQLVLSTRP-----DNYLG 533 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 L + + ++ +F +P + D A Y D+ + D+L Sbjct: 534 ELEQWNDAEKALAESLNEFGMPWKENPGDG------------AFYGPKIDI---TIMDAL 578 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIE 330 + + ++ F +++L ++ DG K V + +G++ + A++ Sbjct: 579 KRAHQCATIQLD----FQLPIRFNL----SYIADDGEKKRPVIIHRAILGSVERMIAILT 630 Query: 331 SSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIY--ARLSKVGCDVFWDDMGEQ 387 + GK WP ++P ++ ++ + A+DQ + ++++ +S+ CD G+ Sbjct: 631 ENFAGK---WPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDA-----GDT 682 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + + A L F ++VG K S + V ++ R + ++S+ E+I Sbjct: 683 MNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELIT 731 >gi|27468275|ref|NP_764912.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis ATCC 12228] gi|293366369|ref|ZP_06613048.1| threonine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|38258358|sp|Q8CS74|SYT_STAES RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|27315821|gb|AAO04956.1|AE016748_190 threonyl-tRNA synthetase 1 [Staphylococcus epidermidis ATCC 12228] gi|291319494|gb|EFE59861.1| threonine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|329733742|gb|EGG70068.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU045] gi|329737259|gb|EGG73513.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU028] Length = 645 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 91/407 (22%), Positives = 167/407 (41%), Gaps = 45/407 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML-RL 96 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M + Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAM 321 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D+AM+ P + I+++ SYR LP ++ R E G+ R R Sbjct: 322 KLDEDEAMVLRPMNCPHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIQDVYKDFGFEDYRFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLN---SIVEQWTAPYAATSDVHNEKLFDSLP 272 + + D M S + D + L +I E A Y DV ++ ++ Sbjct: 427 PEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAIGE--AAFYGPKLDV---QVKTAMG 481 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIE 330 + + +S ++ F ++ L T+ G DG+ H + G+ + R VA + E Sbjct: 482 KEETLSTAQLD----FLLPERFDL----TYIGQDGEQHRPVVIHRGVVSTMERFVAFLTE 533 Query: 331 SSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + KG +P +AP ++ +I NI H D + L G V DD E++ Sbjct: 534 ET---KG-AFPTWLAPMQVEIIPVNIDLH----YDYARLLQDELKSQGVRVEIDDRNEKM 585 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + A + P Q++VG + V +V ++ + +E + +E I Sbjct: 586 GYKIREAQMKKIPYQIVVGDQEVEHQEVNVRKYGSEKQESVEKDEFI 632 >gi|283470950|emb|CAQ50161.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398] Length = 645 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 86/404 (21%), Positives = 168/404 (41%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ ++M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 QLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ + ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + + + D D +EN + L E+ A + ++ ++ + + Sbjct: 427 PEDKEKYFDDD--DMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEE 484 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSH 333 +S ++ F ++ L T+ G DG+ H + G+ + R VA + E + Sbjct: 485 TLSTAQLD----FLLPERFDL----TYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEET- 535 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 KG +P +AP ++ +I NI H D ++ L G V DD E++G + Sbjct: 536 --KG-AFPTWLAPKQVQIIPVNIDLH----YDYARQLQDELKSQGVRVSIDDRNEKMGYK 588 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFI 632 >gi|255731874|ref|XP_002550861.1| hypothetical protein CTRG_05159 [Candida tropicalis MYA-3404] gi|240131870|gb|EER31429.1| hypothetical protein CTRG_05159 [Candida tropicalis MYA-3404] Length = 684 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 73/346 (21%), Positives = 138/346 (39%), Gaps = 72/346 (20%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 280 DEHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEG 339 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ LT + + ++ Y ++ L ++P +V E + Sbjct: 340 HTAHLTQDAAAEEVLQILDYYAGVYEEL--LAVP----------------VVKGKKTENE 381 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F D+ + VE + A + R Sbjct: 382 KFAGGDY------------------TTTVEGFIA----------------------ATGR 401 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKG 337 GI+ G + GT +S + + + +G + + S+G+ + RV+ +I + D KG Sbjct: 402 GIQGGTSHHLGTNFSKMFNLSVESPEGPEKPRIFAYQNSWGL-STRVIGVMIMTHSDNKG 460 Query: 338 IIWPDSVAPFKISLINI----KAHDQVCRD---ACEKIYARLSKVGCDVFWDDMGE--QI 388 ++ P +A ++ +I + K+ D +D +KI L G D E Sbjct: 461 LVLPPRIAQYQAVVIPVGLTSKSSDAQRKDINEGAQKIEKTLQDAGIRAT-GDYREIYNP 519 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +FA +L G PL++ G K ++ ++V + R G + + L+E+ Sbjct: 520 GWKFADWELKGVPLRLEFGPKDLAGNQVTVVRRNDGKKYTVKLDEL 565 >gi|255714212|ref|XP_002553388.1| KLTH0D15620p [Lachancea thermotolerans] gi|238934768|emb|CAR22950.1| KLTH0D15620p [Lachancea thermotolerans] Length = 453 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 92/450 (20%), Positives = 169/450 (37%), Gaps = 89/450 (19%) Query: 36 SKGIYSWLPLGQKALDN-VNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 S G +LP G K + VN + ++QN+ G E+ P + LW +SG +++Y ++M Sbjct: 50 SPGSVFFLPNGTKIFNKLVNFMKLQQQNKFGFQEVITPLIYRKSLWEQSGHWENYKEDMF 109 Query: 95 RLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 R+ ++ + YG P + +F+ +SY LP + R+E G+ R Sbjct: 110 RVEGQDLQKEEYGLKPMNCPGHCMVFKRFARSYNELPLRYSDFSPLHRNEASGALSGLTR 169 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R+F D + F IP + ES + I Sbjct: 170 VRKFHQDDGHIF----------------------------CIPEQVESEIT------KCI 195 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + D T+V FP+ NT D + L++ E + + + H E + + + Sbjct: 196 KMLDLCYTKV--------FPLGRGNTPTDYELRLSTRPEHYVGDVSVWN--HAEAILEGI 245 Query: 272 PENKRVSARGIEVGHIFYFGTK---------------------YSLPMSATFKGADGKDH 310 NK I G ++G K + LP K D + Sbjct: 246 -LNKSGKVWSINAGDGAFYGPKIDVLLADHNNKQHQVATIQLDFQLPERFDLKYKDKDNT 304 Query: 311 Y---VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC------ 361 + + + G++ A++ S++GK WP + P + ++ + ++ Sbjct: 305 FKRPIMIHRAVFGSVERFMAMLIDSNEGK---WPFWLNPHQCMIVPLNTKNEALVHKAND 361 Query: 362 -------RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D +L+ +V DD E G + A + ++VG+K + Sbjct: 362 LARALRGEDTPADEPVKLNSFHFNVDIDDRAEPTGYRIKEAIEKNYSFLIMVGTKEIESG 421 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSN 444 K I+ R + E ++L+E+I S+ SN Sbjct: 422 KYAIRTRESRDLEHLTLDEIIQKFSNLESN 451 >gi|227519418|ref|ZP_03949467.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|307280591|ref|ZP_07561639.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|227073125|gb|EEI11088.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|306503957|gb|EFM73174.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|315145737|gb|EFT89753.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2141] gi|315151718|gb|EFT95734.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0012] gi|315173904|gb|EFU17921.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1346] Length = 660 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 277 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 336 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 442 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 499 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 550 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 551 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 603 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 659 >gi|189466356|ref|ZP_03015141.1| hypothetical protein BACINT_02731 [Bacteroides intestinalis DSM 17393] gi|189434620|gb|EDV03605.1| hypothetical protein BACINT_02731 [Bacteroides intestinalis DSM 17393] Length = 646 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 92/428 (21%), Positives = 157/428 (36%), Gaps = 67/428 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + +R Q R E+ P + + L++ SG Y YGK+ + Sbjct: 261 KGLPMWLPKGTALRLRLQEFLRRIQARYDYQEVITPPIGNKLLYITSGHYAKYGKDSFQP 320 Query: 97 ADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ Y P + I+++ +SY++LP + R E G+ R R Sbjct: 321 IHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K + ++ +F + ++ + I L Sbjct: 381 SFTQDDAHIF-CRPDQVKDEFLRVMDIISIVFRSMEFANVEAQ--------------ISL 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A + EK + E Sbjct: 426 RDKVNREKYIGSD-----------------------ENWERAEQAIIEACEEKGLTARIE 462 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP + GAD + H V + Sbjct: 463 YGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFDLEYTGADNQKHRPVMIHRAPF 522 Query: 320 GAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G+M R VA +IE + GK +W P+ VA IS + D +++ L + Sbjct: 523 GSMERFVAVLIEHTA-GKFPLWLTPEQVAILPIS--------EKFNDYAQEVKKFLKQYD 573 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D+ E+IG + +L P +IVG K + +V ++ + G + M EE Sbjct: 574 IRAIVDERNEKIGRKIRDNELKRIPYMLIVGEKEAENREVSVRKQGEGDKGTMKFEEFAK 633 Query: 437 YASHRFSN 444 + N Sbjct: 634 ILNEEVQN 641 >gi|76801546|ref|YP_326554.1| prolyl-tRNA synthetase [Natronomonas pharaonis DSM 2160] gi|114152219|sp|Q3IS99|SYP_NATPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|76557411|emb|CAI48989.1| proline--tRNA ligase [Natronomonas pharaonis DSM 2160] Length = 482 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 81/365 (22%), Positives = 138/365 (37%), Gaps = 78/365 (21%) Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 WV G +D + RLA R PT E ++T ++SYR+LP Q Sbjct: 95 WVTHGGHDELEE---RLAVR--------PTSESIITPFIAEWVRSYRDLPLRVNQWCSVV 143 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 R E R++EFL ++ ++ T E + Y R++ + +IP Sbjct: 144 RWEATETKPFFRTKEFLWQEGHTAHATEESAWDETMTRLEQYERLYEEV--MAIP----- 196 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 G G H+ ADT T I +L Sbjct: 197 GMTGRKPEHDKFPGADTTTT----------------------IEAL-------------- 220 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 +P+ K V A G Y GT ++ + D S+G+ Sbjct: 221 -----------MPDGKSVQA-----GTSHYLGTSFAEAFDIEYTDEDETKQTAHTTSWGL 264 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD--QVCRDACEKIYARLSKVGC 377 + R + A+I + D +G++ P ++AP ++ ++ I D + ++ + A L + Sbjct: 265 -SWRALGALIMTHSDDQGLVIPPALAPTQVVVVPIWQADTEEAVKEYAADLAAELDE-QF 322 Query: 378 DVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG---IREDMSLEE 433 V DD E+ G +F +L G PL++ +G V D + HR G + E S+ + Sbjct: 323 RVELDDRDERNPGFKFNEHELQGVPLRIEIGPNEVEDEAATLVHRPDGESDVAERESITD 382 Query: 434 VINYA 438 ++ A Sbjct: 383 AVDEA 387 >gi|24583839|ref|NP_723725.1| Threonyl-tRNA synthetase, isoform A [Drosophila melanogaster] gi|22946307|gb|AAF53166.2| Threonyl-tRNA synthetase, isoform A [Drosophila melanogaster] gi|211938559|gb|ACJ13176.1| FI05224p [Drosophila melanogaster] Length = 747 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 84/409 (20%), Positives = 169/409 (41%), Gaps = 44/409 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G + P G + + I+ E + G E+ P + +A LW+ SG + Y + Sbjct: 362 HELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNIYNAKLWMTSGHWQHYAEN 421 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +K + P + IF + +S+R LP + R+EL G+ R Sbjct: 422 MFSFEAEKEKFAL-KPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLTR 480 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F PE K S K + +L+ + + S + + P + Sbjct: 481 VRRFQQDDAHIF-CAPEQIK-SEMKGCLEFLKYVYTIFGFSFQLVLSTRP-----DNYLG 533 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 L + + ++ +F +P + D A Y D+ + D+L Sbjct: 534 ELEQWNDAEKALAESLNEFGMPWKENPGDG------------AFYGPKIDI---TIMDAL 578 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIE 330 + + ++ F +++L ++ DG K V + +G++ + A++ Sbjct: 579 KRAHQCATIQLD----FQLPIRFNL----SYIADDGEKKRPVIIHRAILGSVERMIAILT 630 Query: 331 SSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIY--ARLSKVGCDVFWDDMGEQ 387 + GK WP ++P ++ ++ + A+DQ + ++++ +S+ CD G+ Sbjct: 631 ENFAGK---WPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDA-----GDT 682 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + + A L F ++VG K S + V ++ R + ++S+ E+I Sbjct: 683 MNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELIT 731 >gi|85711636|ref|ZP_01042693.1| threonyl-tRNA synthetase [Idiomarina baltica OS145] gi|85694496|gb|EAQ32437.1| threonyl-tRNA synthetase [Idiomarina baltica OS145] Length = 638 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 85/397 (21%), Positives = 149/397 (37%), Gaps = 50/397 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W G + +RE+ E+ P + LW +SG ++ + Sbjct: 257 QEEAPGMVFWHHNGWTIFRELEDFVREKLREYQYQEVKGPMMMDRVLWEKSGHWEKFSDL 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + N + + P + IF +KSYR+LP + R+E G+MR Sbjct: 317 MFTTSSENREYAV-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLMR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F DA+ F T + + + G I ++ + P +G D + Sbjct: 376 VRGFTQDDAHVF-CTEDQVQDEVAACIKMVYETYETFGFDKIDVKLSTRPEKRLGDDATW 434 Query: 209 EFIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + ++ + D +DF +P E + I L Sbjct: 435 D---RSEKALADALKAHD-IDFTYLPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 FD L R + G I ++LP ++AT+ G D H M I G++ Sbjct: 471 FDCL-------GRAWQCGTI---QLDFALPGRLNATYVGEDNDRHTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +W +AP ++ L+NI + RD K+ L++ G D Sbjct: 521 FMGILIEEYAGNFPLW---LAPTQVVLMNITDNQ---RDYVNKVVKSLNEKGIRASADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG K V +V ++ R Sbjct: 575 NEKIGFKIREHTLKRVPYLLVVGDKEVEAGEVAVRTR 611 >gi|110597728|ref|ZP_01386012.1| prolyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] gi|110340635|gb|EAT59115.1| prolyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] Length = 481 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 69/330 (20%), Positives = 132/330 (40%), Gaps = 63/330 (19%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ I+SYR+LP Q R E+R R +R+ EFL ++ ++ TP Sbjct: 108 PTSETIIWSSYKKWIQSYRDLPILINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHATP 166 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E S+ +M Y + M ++ S +F G + +C Sbjct: 167 EESQEEVMRMINVYKTFAEEYMAMPVIMGKKTD------SEKF-----AGAVETYC---- 211 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + ++++ A A TS HN Sbjct: 212 -----------------IEAMMQDTKALQAGTS--HN----------------------- 229 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 G ++ F+ + YV S+G+ + R++ A+I + D +G++ P +A Sbjct: 230 --LGQNFAKAFDCQFQTKESTLDYVWATSWGV-STRLIGALIMAHSDDRGLVLPPKLATR 286 Query: 348 KISLINIKAHDQVCRDA-CEKIYARLSKVGCDVFWDDMGEQI-GSQFAVADLLGFPLQVI 405 ++ +I I D+ A E I L K G F D + G +FA +L G P+++ Sbjct: 287 QVVIIPILRGDKAAVLAKAEAIADSLKKSGIPSFVDGSEQNSPGWKFAEYELQGIPIRIE 346 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G + + ++ R T + +++L++ + Sbjct: 347 LGPRDIENNICIAARRDTLEKTELALDDTL 376 >gi|14521178|ref|NP_126653.1| prolyl-tRNA synthetase [Pyrococcus abyssi GE5] gi|74581662|sp|Q9V022|SYP_PYRAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|5458396|emb|CAB49884.1| proS prolyl-tRNA synthetase [Pyrococcus abyssi GE5] Length = 480 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 82/168 (48%), Gaps = 3/168 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + + ++ + ++ DG YV ++G+ R++AAVI D +G+ Sbjct: 220 GRTLQIGTMHNYKQNFAKAYNILYEKEDGTHDYVHQTTFGMSE-RLLAAVIAIHGDDRGM 278 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P ++AP ++ ++ I K ++ + +I L G V D ++ G +F + Sbjct: 279 VLPPTIAPIQVVIVPIPKKEKQEIVYEYAREIEEELRTAGIRVHLDMREKRPGWKFYDWE 338 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 L G P+++ VG + V +S V + R + + EE+++ F + Sbjct: 339 LKGVPVRIEVGPRDVENSTVVLARRDKLEKITIKREELVDKVRELFDD 386 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 5/123 (4%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+ WLP G K + N+ I EE RTG E+ P L + E+ + E+ Sbjct: 32 KGMNVWLPYGLKIMKNIEKFIHEEMERTGHQEVLFPALIPETEFKKEAEHIAGFEGEVFW 91 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D +I PT E M +F I+S+ +LPF YQI +R E + ++R Sbjct: 92 ITHAGHEPLDVKLILRPTSETAMYSMFALWIRSHADLPFKVYQIVNVYRYETKHTRPLIR 151 Query: 152 SRE 154 RE Sbjct: 152 VRE 154 >gi|312951108|ref|ZP_07770013.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|310630884|gb|EFQ14167.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|315154152|gb|EFT98168.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0031] Length = 660 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 277 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 336 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 337 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 396 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 397 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 441 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 442 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 498 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 499 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 550 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 551 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 603 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIREDMSL------EEVINYA 438 + + P Q++VG K + D+ V ++ + T + ED+S+ EV NY+ Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSV-EDLSIFIDSMAAEVHNYS 659 >gi|293569265|ref|ZP_06680563.1| threonyl-tRNA synthetase [Enterococcus faecium E1071] gi|291587971|gb|EFF19821.1| threonyl-tRNA synthetase [Enterococcus faecium E1071] Length = 646 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 83/389 (21%), Positives = 155/389 (39%), Gaps = 40/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 261 GLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPM 320 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 321 DMGDGEMLVLRPMNCPHHMMVYKNTIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 380 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 381 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 425 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 426 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTE 482 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 483 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 534 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I ++ AH D +I RL G V DD E++G Sbjct: 535 YKGAFPTW---LAPIQATIIPVSVDAHG----DYAYEIKERLQMKGLRVEVDDRNEKMGY 587 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + P Q++VG K + D+ V ++ Sbjct: 588 KIRASQTQKIPYQLVVGDKELEDATVNVR 616 >gi|253581047|ref|ZP_04858308.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847710|gb|EES75679.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 479 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ + + K YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFARAFGIQYTDKENKLQYVHQTSWGM-TTRMIGAIIMVHGDNSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP + +I I+ + + ++++A L G V DD + G +FA ++ Sbjct: 284 VLPPRIAPVQAVIIPIQQRKEGVLEKADEMFAALKAAGVRVKVDDTDKSPGFKFAEQEMR 343 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P+++ G K + + + I R T + ++ +E++ Sbjct: 344 GIPIRIECGPKDIENGQAVICRRDTREKYTVTFDELVE 381 >gi|170732802|ref|YP_001764749.1| threonyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] gi|238688618|sp|B1K091|SYT_BURCC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169816044|gb|ACA90627.1| threonyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] Length = 635 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 151/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +V F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGHVQV----FKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHS--YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ DA+ F + S +N + +S ++ G I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMS---VYKDFGFDHIDIKLSLRPDQRA 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + E A+ G + +P E A Y + H Sbjct: 428 GTDETWARAEQGLRDALTACGLTWEELPGEG-----------------AFYGPKIEYH-- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 + D+L + + +++ G +Y + + V + +G+M Sbjct: 469 -IKDALGRSWQCGTLQLDMVLPERLGAEY-------VAEDNSRRRPVMLHRAIVGSMERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H G +W +AP++ ++NI A Q + + + L K G V D Sbjct: 521 LGILIEHHAGAMPVW---LAPYQAIVLNI-AESQA--EYAQSLTQTLQKQGVRVAADLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P ++VG K V ++ R Sbjct: 575 EKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRAR 610 >gi|260775804|ref|ZP_05884700.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260608220|gb|EEX34389.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 392 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 4/133 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G+ W P G + V A IR Q R G E+ P L + +W SG + YG+ Sbjct: 17 ISESVSGMVDWYPKGHELYRKVQAYIRSVQKRYGYHEVRSPVLANHSVWTTSGHNEKYGE 76 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + N + P +F + SYR LP+ + L R+E G+ Sbjct: 77 NMFHVPEHN---LSVKPMSCPFHISMFNELVSSYRELPYRIAEFGLCHRNESSGSLNGLF 133 Query: 151 RSREFLMKDAYSF 163 R R F D + F Sbjct: 134 RLRAFNQDDGHIF 146 >gi|227529941|ref|ZP_03959990.1| threonine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] gi|227350126|gb|EEJ40417.1| threonine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] Length = 601 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 83/405 (20%), Positives = 161/405 (39%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I + + G + P L + D + SG ++ Y +M Sbjct: 217 GLPYWMPKGATIRRTIERYIIDREVADGYKHVYTPVLMNLDAYKTSGHWEHYRDDMFPPM 276 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 277 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRIAELGMMHRYEKSGALSGLQRVREM 336 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F +T + + + K+ + ++ + R + L D Sbjct: 337 TLNDGHTF-VTLDQIRSEFAKILRLIMDVYKDFDITDYSFR--------------LSLRD 381 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M S D ++L+ E A Y D+ + +L + Sbjct: 382 PKNVKKYYANDEMWEKSQSMLKKAMDDLNLDYYEAEGEAAFYGPKLDIQTKT---ALGND 438 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DGK+H M G +G M A + + Sbjct: 439 ETMSTIQLD----FMLPERFGL----TYVGQDGKEHQPVMIHRGVVGTMERFIAYLTEIY 490 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N AH + + +K+ A V D E++G + Sbjct: 491 KGAFPTW---LAPEQVHIIPVNEDAHGEYADELAKKMKA----ANIRVVVDHRNEKMGYK 543 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P ++VG +++ V ++ + +MS + +N Sbjct: 544 IRESQTQKVPYTLVVGDDEKANNGVSVRKYGEKEQNEMSQDAFMN 588 >gi|237844903|ref|XP_002371749.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49] gi|211969413|gb|EEB04609.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49] Length = 844 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 64/150 (42%), Gaps = 5/150 (3%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G K + + +REE G E+ P + S DLW SG Y +Y KE + Sbjct: 414 SPGSCFWLPDGAKVYNKLCMFMREEYRFRGFQEVISPNIFSCDLWKVSGHYQNY-KENMY 472 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L D K P + +F+ SYR LP + R+EL G+ R R Sbjct: 473 LFDVEGKEWGLKPMNCPGHCIMFKHLAPSYRQLPLRLADFGVLHRNELSGSLTGLTRVRR 532 Query: 155 FLMKDAYSF---DLTPEGSKHSYNKMFVSY 181 F DA+ F D E + N +F Y Sbjct: 533 FQQDDAHIFCRLDQVKEEVADALNFLFFVY 562 >gi|46580942|ref|YP_011750.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|120601757|ref|YP_966157.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris DP4] gi|81566250|sp|Q728R5|SYT_DESVH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166987320|sp|A1VBB4|SYT_DESVV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|46450362|gb|AAS97010.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|120561986|gb|ABM27730.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Desulfovibrio vulgaris DP4] gi|311234632|gb|ADP87486.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris RCH1] Length = 644 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 94/408 (23%), Positives = 158/408 (38%), Gaps = 49/408 (12%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G + +R+E + + P L +LW +SG YD+Y +E + Sbjct: 259 APGMVFWHPKGMLVRTIIEDFLRKEHLKRRYDIVQGPQLLRRELWEKSGHYDNY-RENMY 317 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + ++ A P + I+RS I+SYR+LP F+++ + R E G++R R+ Sbjct: 318 FTEIDENAYGVKPMNCLAHMLIYRSAIRSYRDLPKRFFELGVVHRHEKSGVLHGLLRVRQ 377 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFI 211 F DA+ P+ + + + + G ++ R E IG D + E Sbjct: 378 FTQDDAHII-CRPDQLEDEIIDVIALVRDLMNLFGFDYKVAVSTRPEKS-IGSDEAWELA 435 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 A K IP +I E A Y DV +L D + Sbjct: 436 TNA--------LVKAVERAGIPY------------TINEGDGAFYGPKIDV---RLMDCI 472 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAV 328 + S ++LP + G DG+ H M I G++ V Sbjct: 473 GREWQCST----------IQCDFTLPERFDLVYVGQDGERHRPVMVHRAILGSLERFIGV 522 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G +P +AP + L+ + + E A L+K G V D E++ Sbjct: 523 LIEQYAGA---FPAWLAPVQARLLTVTDAQN---EFVESARAALAKAGIRVEADVRNEKL 576 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G + A L P ++VG K V V ++ R SL+EV++ Sbjct: 577 GYKVREAQLEKIPYILVVGDKEVEAGGVNVRLRTGENLGLKSLDEVVS 624 >gi|312134685|ref|YP_004002023.1| threonyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] gi|311774736|gb|ADQ04223.1| threonyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] Length = 639 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 92/415 (22%), Positives = 161/415 (38%), Gaps = 45/415 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I G +LP G + + REE + G E+ P + + +LW++SG +D Y K Sbjct: 258 IFDEGPGFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIMLTKELWIQSGHWDHY-K 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D+ P + +++ SYR LP ++ L R EL G+M Sbjct: 317 ENMYFTKIDDQEFAIKPMNCPGGILVYKRKSHSYRELPQRLCELGLVHRHELSGVLHGLM 376 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLS 207 R R F DA+ F + P K + ++ G K + R E+ +G D Sbjct: 377 RVRCFTQDDAHIF-MLPSQIKDEIKGVIDLIDYFYNVFGFKYHVELSTRPENS-MGTD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E +A++ + ++I I E A Y D H E Sbjct: 433 -EQWNMAESALKEA-----------------LEEIGISYKINEGDGAFYGPKIDFHLE-- 472 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVA 326 DSL + + ++ F ++ L + G DG H V + G++ Sbjct: 473 -DSLKRTWQCATIQLD----FQMPERFDL----YYIGEDGAKHRPVMLHRVVFGSIERFI 523 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A++ G +W +AP ++ +I + + + K+ L + G V D E Sbjct: 524 AILTEHFGGAFPVW---LAPTQVRVIPVSDN---FNNYAAKVSQILKENGFRVEEDYRSE 577 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 +G + A L P VIVG K ++ V ++ R G +++E ++ + Sbjct: 578 TVGYKIRDAQLQKIPYMVIVGEKEQKENTVAVRDRKKGDLGSFTIDEFVSMMKEK 632 >gi|307730402|ref|YP_003907626.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1003] gi|307584937|gb|ADN58335.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1003] Length = 635 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 89/424 (20%), Positives = 164/424 (38%), Gaps = 53/424 (12%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + + H S G+ W P G V +R N Sbjct: 231 YLHMLEE----AEKRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAM--IYGPTHEEVMTDIFRS 120 G +E+ P + LW SG + +Y + M +++ D A+ + P H +F Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGH----VQVFNH 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHS--YNKM 177 ++SYR+LP + + R+E G+MR R F+ DA+ F + S +N + Sbjct: 343 GLRSYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEEQFISESIAFNTL 402 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +S ++ G ++ ++ P + E A+ G + + +P E Sbjct: 403 AMS---VYKDFGFDNVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEELPGEG- 458 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 A Y + H + D+L + + +++ G +Y Sbjct: 459 ----------------AFYGPKVEYH---IKDALGRSWQCGTLQLDMVLPERLGAEY--- 496 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +G+ + + +G+M ++ H G W +AP ++ ++NI A Sbjct: 497 ----VAEDNGRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAW---LAPMQVVVMNI-AE 548 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 +Q + + + L K G V D E+I + L P ++VG K V Sbjct: 549 NQA--EYAQSLAQSLQKQGVRVEADLRNEKISYKIRQHTLEKVPYLLVVGDKEREAQTVA 606 Query: 418 IKHR 421 ++ R Sbjct: 607 VRAR 610 >gi|222479210|ref|YP_002565447.1| prolyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] gi|259511600|sp|B9LUM0|SYP_HALLT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|222452112|gb|ACM56377.1| prolyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 491 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 69/321 (21%), Positives = 119/321 (37%), Gaps = 65/321 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++T ++S+R+LP Q R E R++EFL ++ ++ T Sbjct: 116 PTSESIITPYISQWVRSHRDLPLRVNQWCSVVRWEATETKPFFRTKEFLWQEGHTAHATH 175 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 EG+ Y ++ L ++P+ P D Sbjct: 176 EGAWEETMTRLDQYASVYED--LLAMPVLKGQKP------------------------DH 209 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 FP T + + +P+ K V A G Sbjct: 210 DKFPGAETTTTVEAL----------------------------MPDGKSVQA-----GTS 236 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + G ++ TF D ++ S+G+ + R + A+I + D +G++ P VAP Sbjct: 237 HHLGQSFAEAFDITFSDEDEEERIAHTTSWGL-SWRALGALIMTHSDEQGLVLPPGVAPE 295 Query: 348 KISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQ 403 ++ ++ I D+V A E + L G V DD G G +F +L G PL+ Sbjct: 296 QVVVVPIWQEDTKDEVLEYA-EGVADDLDDAGIRVELDDRDGRNPGFKFNEHELNGVPLR 354 Query: 404 VIVGSKFVSDSKVEIKHRLTG 424 + +G V D ++ + HR G Sbjct: 355 IEIGPHEVEDGELTLVHRPDG 375 >gi|331007295|ref|ZP_08330496.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC1989] gi|330418902|gb|EGG93367.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC1989] Length = 640 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 84/414 (20%), Positives = 155/414 (37%), Gaps = 47/414 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ Q G E+ P + LW SG +D + Sbjct: 256 MQEEAPGMVFWHPKGWSIYATIEEYMRKVQRDNGYKEIKTPQVVDRSLWERSGHWDKFRD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + I P + +F +KSY+ LP + R+E G+M Sbjct: 316 NMFTVESESRDYAI-KPMNCPCHVQVFNQGLKSYKELPLRLAEFGSCHRNEASGTLQGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGGDLSHE 209 R R F+ DA+ F E + +F L +++ G + +R + P + E Sbjct: 375 RVRGFVQDDAHIF--CSEEAIQEEVSVFTDLLYKVYADFGFSDVIIRLSTRPEQRVGTEE 432 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 A+ +K +P E + I + L D Sbjct: 433 GWDKAEKALADALDAKGLPWEELPGEGAFYGPKIEFS--------------------LRD 472 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVA 326 L N+ I+V +S+P + A + DG M I G+ Sbjct: 473 CL--NRVWQCGTIQV--------DFSMPGRLDAQYVAEDGSRQVPVMLHRAILGSFERFI 522 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ ++G W +AP +++++NI + + +K L G V D E Sbjct: 523 GILIEHYEGAFPTW---LAPEQVAILNITDNQS---EYVQKTEKALRDKGFRVISDLRNE 576 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +IG + L P +++G K V ++ + ++ R TG ED+ + + + +H Sbjct: 577 KIGFKIREHTLQRIPYLLVIGDKEVENNALAVRTR-TG--EDLGVMSIDAFVAH 627 >gi|255534998|ref|YP_003095369.1| threonyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] gi|255341194|gb|ACU07307.1| Threonyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] Length = 639 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 157/418 (37%), Gaps = 63/418 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + + E Q + G + P + + +L+V SG +D YG + + Sbjct: 260 GLPLWLPKGAALRKKLENFLSEAQKKAGYEFVMTPHIGAKELYVTSGHWDKYGADSFQPI 319 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + + ++ M+ P + +I++ SY++LP F + +R E G+ R R Sbjct: 320 KTPNEGEEFML-KPMNCPHHCEIYKVGQWSYKDLPKRFAEFGTVYRYEQSGELHGLTRVR 378 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TP+ + + L +F LG + + I L Sbjct: 379 GFTQDDAHLF-CTPDQLLTEFENVIDLTLYVFKSLGFEDFVTQ--------------ISL 423 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A +K ++ E Sbjct: 424 RDPENKEKYIGSD-----------------------ENWKKAENAIIQAAAKKGLKTVVE 460 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP + G+D + H V + Sbjct: 461 YGEAAFYGPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYIGSDNEKHRPVMIHRAPF 520 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G+M A++ + G +W +AP + +++ I + D +K+ L Sbjct: 521 GSMERFIAILLENTAGDFPLW---LAPDQFTILPI---SEKYADYAKKVSELLENHDICG 574 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DD E+ G + A++ P ++VG + V ++ R G MS+E+ I Y Sbjct: 575 LIDDRNEKTGRKIRDAEIKKLPFMLVVGETEELNGTVSVRRRGEGDLGTMSVEDFIAY 632 >gi|121591402|ref|ZP_01678683.1| threonyl-tRNA synthetase [Vibrio cholerae 2740-80] gi|121546739|gb|EAX56913.1| threonyl-tRNA synthetase [Vibrio cholerae 2740-80] Length = 642 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR++ N G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S MD P + E A Y + L Sbjct: 433 ----EIWDKSEQALIDSLKAMDIPF--------------EVQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVVVNITDKQA---DYAHEVAQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 576 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 612 >gi|294619108|ref|ZP_06698603.1| threonyl-tRNA synthetase [Enterococcus faecium E1679] gi|291594769|gb|EFF26151.1| threonyl-tRNA synthetase [Enterococcus faecium E1679] Length = 646 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 83/389 (21%), Positives = 155/389 (39%), Gaps = 40/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 260 GLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPM 319 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLVLRPMNCPHHMMVYKNTIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 425 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTE 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 482 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 533 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I ++ AH D +I RL G V DD E++G Sbjct: 534 YKGAFPTW---LAPIQATIIPVSVDAHG----DYAYEIKERLQMKGLRVEVDDRNEKMGY 586 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + P Q++VG K + D+ V ++ Sbjct: 587 KIRASQTQKIPYQLVVGDKELEDATVNVR 615 >gi|254171909|ref|ZP_04878585.1| prolyl-tRNA synthetase [Thermococcus sp. AM4] gi|214033805|gb|EEB74631.1| prolyl-tRNA synthetase [Thermococcus sp. AM4] Length = 483 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 7/139 (5%) Query: 23 HKLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADL 79 ++L+ G+I + KG+ WLP G K + N+ A IR E RTG E+ P L + Sbjct: 18 NELLETAGIIDKRYPVKGMNVWLPYGLKIMRNIEAFIRAEMERTGHEEVLFPALIPETEF 77 Query: 80 WVESGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 E+ + E+ + D D +I PT E M +F I+S+ +LPF YQI Sbjct: 78 QKEAEHIKGFEDEVYWVTHAGLDPLDVRLILRPTSETAMYSMFSLWIRSHADLPFKVYQI 137 Query: 136 QLKFRDELRPRFGVMRSRE 154 +R E + ++R RE Sbjct: 138 VNVYRYETKHTRPLIRVRE 156 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 7/162 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + + ++ + ++ G Y ++G+ R++AAVI D G+ Sbjct: 222 GRTLQIGTMHNYKQNFAKAYNIQYETETGDHEYAHQTTFGMSE-RLLAAVIAVHGDDSGM 280 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P ++AP ++ ++ I D +I L K G V D+ + G ++ + Sbjct: 281 VLPPTIAPIQVVIVPIPKKDANVDVFAYAREIAEELRKAGFRVHVDERDIRPGRKYYDWE 340 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLT----GIREDMSLEEV 434 L G PL++ VG + V K + R T + D +EEV Sbjct: 341 LKGVPLRIEVGPRDVEGRKAVLARRDTFEKVTVERDAIVEEV 382 >gi|332300493|ref|YP_004442414.1| threonyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] gi|332177556|gb|AEE13246.1| threonyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] Length = 650 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 95/419 (22%), Positives = 169/419 (40%), Gaps = 62/419 (14%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + + ++ Q R G ++ P + + +L+ SG Y YG + ++ Sbjct: 264 QGLPLWLPRGTQLRLKLEDFLKRIQKRYGYQQVMTPHIGNVELYKTSGHYAKYGADSFQV 323 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + +A + P + +I+R SYR+LP + +R E G+ R R Sbjct: 324 ITTPQEGEAFMLKPMNCPHHCEIYRLKPHSYRDLPVRLAEFGTVYRYEQSGELHGLTRVR 383 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS----IPMRAE---SGPIGGDL 206 F DA+ F P+ K + K+ IF L ++ I +R++ S IG + Sbjct: 384 GFTQDDAHIF-CRPDQVKEEFLKVMDIIFIIFRALDFENFEAQISLRSQTDRSKYIGSEE 442 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + D E + + P + ++D+ A Y D Sbjct: 443 NW------DRAEQAIIEACQEAGLPA---HVEYDE-----------AAFYGPKLDF---M 479 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAM- 322 + D+L R ++G I Y+LP + G D + H V + G+M Sbjct: 480 VKDAL-------GRRWQLGTI---QVDYNLPERFDLEYTGEDNQKHRPVMIHRAPFGSME 529 Query: 323 RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 R VA +IE + GK +W PD V +S + + ++ LS+ V Sbjct: 530 RFVAVLIEHTA-GKFPLWLAPDQVVILPVS--------ERFNEYANEVAVALSEHDISVS 580 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD E++G + +L P +IVG + +D V ++ + G D+ E++ +A Sbjct: 581 IDDRNEKVGRKIRDNELKRIPYMLIVGEQEQADGTVSVRKQGEG---DVGTEKISTFAE 636 >gi|326201675|ref|ZP_08191546.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325988275|gb|EGD49100.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 645 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 85/436 (19%), Positives = 168/436 (38%), Gaps = 33/436 (7%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y + + RD +L L T + + +G+ +P G + + + + +E+ R Sbjct: 229 EEYVTKLEEAKKRDHNKLGRELELFT-TVEEIGQGLPLLMPKGARIVQTLQRFVEDEEER 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD--RNDKAMIYGPTHEEVMTDIFRSH 121 G + P + +DL+ SG + Y M L D ++++ M P I+ + Sbjct: 288 RGYVLTKTPFMAKSDLYKLSGHWQHYKDGMFLLGDEEKDEEVMALRPMTCPFQFMIYNTK 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP + + FR+E G++R R+F + + + TPE + + + Sbjct: 348 LHSYRDLPIRYGETSTLFRNEASGEMHGLIRVRQFTISEGH-LVCTPEQLEDEFKGVVDL 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + LG++ D+++ F + + +++ + T D Sbjct: 407 IKFMMETLGIEE------------DVTYRFSKWDPKNKEKYIGNEEDWENVQGQMRTILD 454 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + E A Y D+ + + K + ++V F L M Sbjct: 455 HLKLDYKEAEGEAAFYGPKLDIQCKNV-----HGKEDTIITVQVD----FALAERLSMVY 505 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 K + K Y+ + IG A++ + G W V + L++ K H Sbjct: 506 VDKNNEKKHPYI-IHRTSIGCYERTLAMLIEKYAGAFPTWLCPVQAKILPLVD-KHH--- 560 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ L G V D E+IG + A + P +++G K + + V ++ Sbjct: 561 --DFAQKVAQMLRDKGVKVEVDTRNEKIGYKIREAQMEKIPYMLVIGDKEMESNAVSVRS 618 Query: 421 RLTGIREDMSLEEVIN 436 R G MS E+ ++ Sbjct: 619 RKEGDLGAMSAEQFVD 634 >gi|221480967|gb|EEE19381.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii GT1] gi|221501688|gb|EEE27452.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii VEG] Length = 844 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 64/150 (42%), Gaps = 5/150 (3%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G K + + +REE G E+ P + S DLW SG Y +Y KE + Sbjct: 414 SPGSCFWLPDGAKVYNKLCMFMREEYRFRGFQEVISPNIFSCDLWKVSGHYQNY-KENMY 472 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L D K P + +F+ SYR LP + R+EL G+ R R Sbjct: 473 LFDVEGKEWGLKPMNCPGHCIMFKHLAPSYRQLPLRLADFGVLHRNELSGSLTGLTRVRR 532 Query: 155 FLMKDAYSF---DLTPEGSKHSYNKMFVSY 181 F DA+ F D E + N +F Y Sbjct: 533 FQQDDAHIFCRLDQVKEEVADALNFLFFVY 562 >gi|69245748|ref|ZP_00603614.1| Threonyl-tRNA synthetase, class IIa [Enterococcus faecium DO] gi|257880251|ref|ZP_05659904.1| threonyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257883051|ref|ZP_05662704.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257891365|ref|ZP_05671018.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257893638|ref|ZP_05673291.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|258614441|ref|ZP_05712211.1| threonyl-tRNA synthetase [Enterococcus faecium DO] gi|260560451|ref|ZP_05832625.1| threonyl-tRNA synthetase [Enterococcus faecium C68] gi|293563269|ref|ZP_06677719.1| threonyl-tRNA synthetase [Enterococcus faecium E1162] gi|294621403|ref|ZP_06700575.1| threonyl-tRNA synthetase [Enterococcus faecium U0317] gi|314939207|ref|ZP_07846461.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|314942550|ref|ZP_07849386.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|314948402|ref|ZP_07851791.1| threonyl-tRNA synthetase [Enterococcus faecium TX0082] gi|314951256|ref|ZP_07854311.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|314991679|ref|ZP_07857149.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|314996805|ref|ZP_07861818.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|68195641|gb|EAN10081.1| Threonyl-tRNA synthetase, class IIa [Enterococcus faecium DO] gi|257814479|gb|EEV43237.1| threonyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257818709|gb|EEV46037.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257827725|gb|EEV54351.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257830017|gb|EEV56624.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260073453|gb|EEW61781.1| threonyl-tRNA synthetase [Enterococcus faecium C68] gi|291599050|gb|EFF30095.1| threonyl-tRNA synthetase [Enterococcus faecium U0317] gi|291604721|gb|EFF34205.1| threonyl-tRNA synthetase [Enterococcus faecium E1162] gi|313589100|gb|EFR67945.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313593770|gb|EFR72615.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|313596608|gb|EFR75453.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|313598686|gb|EFR77531.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|313641458|gb|EFS06038.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|313645194|gb|EFS09774.1| threonyl-tRNA synthetase [Enterococcus faecium TX0082] Length = 646 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 83/389 (21%), Positives = 155/389 (39%), Gaps = 40/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 261 GLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPM 320 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 321 DMGDGEMLVLRPMNCPHHMMVYKNTIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 380 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 381 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 425 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 426 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTE 482 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 483 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 534 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I ++ AH D +I RL G V DD E++G Sbjct: 535 YKGAFPTW---LAPIQATIIPVSVDAHG----DYAYEIKERLQMKGLRVEVDDRNEKMGY 587 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + P Q++VG K + D+ V ++ Sbjct: 588 KIRASQTQKIPYQLVVGDKELEDATVNVR 616 >gi|260655005|ref|ZP_05860493.1| threonine--tRNA ligase [Jonquetella anthropi E3_33 E1] gi|260630320|gb|EEX48514.1| threonine--tRNA ligase [Jonquetella anthropi E3_33 E1] Length = 623 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 84/434 (19%), Positives = 162/434 (37%), Gaps = 82/434 (18%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ G + P G ++++ R G E P + + DLWV+SG +D Y + Sbjct: 238 HKEGIGFPFFHPKGMVVMNSLLDFWRRLHTLNGYSEARTPMILNRDLWVQSGHWDHYQQN 297 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M ++ P + I++ + SY+ P ++ R E G+MR Sbjct: 298 MY-FTTIDEMPCAIKPMNCPGGILIYKDRLHSYKEFPIRLAELGHVHRHEKTGELHGLMR 356 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F TPE K D + Sbjct: 357 VRSFTQDDAHHF-CTPEQIK---------------------------------DEVKFIM 382 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDII------SLNSIVEQWTAPYAATS----- 260 L D ++VF K ++ +N+ D + +L +E+ PY Sbjct: 383 ALDDYVYSKVFGFKYHVELSTRPDNSIGSDELWATAEKALQETLEETNTPYVLNPGDGAF 442 Query: 261 -----DVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDH 310 D H E +G + GT +S+P + G DGK+H Sbjct: 443 YGPKIDFHLEDC----------------IGRTWQCGTIQLDFSMPEKFDMVYIGPDGKEH 486 Query: 311 Y-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKI 368 V + +G++ ++ + G W +AP ++ ++ + ++H +D +++ Sbjct: 487 RPVMLHRTILGSIERFMGILIEQYAGAFPYW---MAPVQVKILPVNESHVAYAKDLKDQL 543 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 R +V D+ E++G + A + P +++G K V + V ++ R G + Sbjct: 544 ADRGHRVEIDL----SDEKLGKKIRNAQVEKVPFMLVIGDKEVENKTVALRDRAEGDKGS 599 Query: 429 MSLEEVINYASHRF 442 +S E++ ++++ Sbjct: 600 VSQEQLFELLANQY 613 >gi|33861154|ref|NP_892715.1| threonyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|73919818|sp|Q7V287|SYT_PROMP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33639886|emb|CAE19056.1| Threonyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 638 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 3/171 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + S G+ W P G + +RE N+ +E+ P LW +SG +D + + Sbjct: 255 IQEESPGMIFWHPNGWTIYQVLEKYVREILNKNDYLEIKTPQAVDKSLWEKSGHWDKFRE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +M A N I P + +F +KSY++LP + R+E G+M Sbjct: 315 DMFTTASENRTYAI-KPMNCPCHIQVFNQGLKSYKDLPIRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 R R F DA+ F T E + + ++ G I ++ + P Sbjct: 374 RVRNFTQDDAHIF-CTEEQIQAEVSTFIDLVFEVYKTFGFDEIIIKLSTRP 423 >gi|299821392|ref|ZP_07053280.1| proline--tRNA ligase [Listeria grayi DSM 20601] gi|299817057|gb|EFI84293.1| proline--tRNA ligase [Listeria grayi DSM 20601] Length = 495 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 1/161 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++ G +S F +G D V S+GI R + A+I D +G+ Sbjct: 239 GKALQIATSHDLGDVFSSAFGIEFTNREGIDTPVYQSSWGI-TTRTIGALIMVHGDDRGL 297 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ ++ I H + A E I ARL + G D +Q G +F +++ Sbjct: 298 MLPPRIAPIQVIIVPIAQHKEGVIAAGESILARLQEKGIRTKIDLSDKQPGWKFNESEMK 357 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G P+++ +G + + +V + R TG + +++E + Y + Sbjct: 358 GIPIRIEMGPRDMEAGQVIVVRRDTGEKTAVAMEGLEAYVT 398 >gi|227550587|ref|ZP_03980636.1| threonine--tRNA ligase [Enterococcus faecium TX1330] gi|257888612|ref|ZP_05668265.1| threonyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257897010|ref|ZP_05676663.1| threonyl-tRNA synthetase [Enterococcus faecium Com12] gi|257898951|ref|ZP_05678604.1| threonyl-tRNA synthetase [Enterococcus faecium Com15] gi|293378702|ref|ZP_06624860.1| threonine--tRNA ligase [Enterococcus faecium PC4.1] gi|293571021|ref|ZP_06682064.1| threonyl-tRNA synthetase [Enterococcus faecium E980] gi|227180295|gb|EEI61267.1| threonine--tRNA ligase [Enterococcus faecium TX1330] gi|257824666|gb|EEV51598.1| threonyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257833575|gb|EEV59996.1| threonyl-tRNA synthetase [Enterococcus faecium Com12] gi|257836863|gb|EEV61937.1| threonyl-tRNA synthetase [Enterococcus faecium Com15] gi|291608947|gb|EFF38226.1| threonyl-tRNA synthetase [Enterococcus faecium E980] gi|292642630|gb|EFF60782.1| threonine--tRNA ligase [Enterococcus faecium PC4.1] Length = 647 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 83/389 (21%), Positives = 155/389 (39%), Gaps = 40/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 261 GLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPM 320 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 321 DMGDGEMLVLRPMNCPHHMMVYKNAIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 380 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 381 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 425 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 426 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTE 482 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 483 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 534 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I ++ AH D +I RL G V DD E++G Sbjct: 535 YKGAFPTW---LAPIQATIIPVSVDAHG----DYAYEIKERLQMKGLRVEVDDRNEKMGY 587 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + P Q++VG K + D+ V ++ Sbjct: 588 KIRASQTQKIPYQLVVGDKELEDATVNVR 616 >gi|222475619|ref|YP_002564036.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Florida] gi|255003612|ref|ZP_05278576.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Puerto Rico] gi|254783506|sp|B9KH76|SYT_ANAMF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|222419757|gb|ACM49780.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Florida] Length = 636 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 9/199 (4%) Query: 14 NPRDAEIASHKLMLR-TGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 N ++AE H+ + + G H ++ G W G + IR + + G +E+ Sbjct: 236 NMQEAEKRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRIIEEYIRCKLKKHGYLEVK 295 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + LW +SG ++ + + M + D + K + P + IF+S I+SY+ LP Sbjct: 296 TPIMLDRKLWEKSGHWEKFKENMFVVED-DKKELAIKPMNCPCHVQIFKSKIRSYKELPI 354 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + + R+E +G+MR R F DA+ F T E + + + + ++ G Sbjct: 355 RMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIF-CTHEQVRDEVLRFYELLMEVYKDFG 413 Query: 190 LKSIPMRAESGP---IGGD 205 S+ ++ P IG D Sbjct: 414 FDSVTVKLSDRPENRIGSD 432 >gi|156934293|ref|YP_001438208.1| hypothetical protein ESA_02124 [Cronobacter sakazakii ATCC BAA-894] gi|156532547|gb|ABU77373.1| hypothetical protein ESA_02124 [Cronobacter sakazakii ATCC BAA-894] Length = 453 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 84/400 (21%), Positives = 147/400 (36%), Gaps = 54/400 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 67 MQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 126 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 127 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 185 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 186 RVRGFTQDDAHIF-CTEEQVRDEVNSCIRMVYDMYSTFGFEKIVVKLSTRPEKRIGTD-- 242 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 + D E + + + + P P E + I Sbjct: 243 ----EMWDRAEADLAVALEENNIPFEYQPGEGAFYGPKIEFT------------------ 280 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 L+D L R + G + +SLP +SA++ G + + M I G+ Sbjct: 281 --LYDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGENNERQVPVMIHRAILGS 328 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 M ++ G +P +AP ++ ++NI + ++ +L G V Sbjct: 329 MERFIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTRKLQNAGIRVKA 382 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + L P ++ G K V KV ++ R Sbjct: 383 DLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 422 >gi|70726243|ref|YP_253157.1| threonyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|68446967|dbj|BAE04551.1| threonyl-tRNA synthetase 1 [Staphylococcus haemolyticus JCSC1435] Length = 645 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 85/405 (20%), Positives = 173/405 (42%), Gaps = 41/405 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + +L+ SG +D Y +M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVELYKTSGHWDHYRDDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ + M+ P + ++ + SYR LP ++ R E G+ R R Sbjct: 322 KLDETEEMVLRPMNCPHHMMVYNNRPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + D++ F + P+ K + ++ ++ G + R + P + + + Sbjct: 382 TLNDSHIF-VRPDQIKDEFKRVVNMIQEVYSDFGFEDYTFRLSYRDPEDKEKYMDDDEMW 440 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + ET + + D M P + +I E A Y DV ++ ++ + Sbjct: 441 NKAETMLKEAVDEMGLPY------------VEAIGE--AAFYGPKLDV---QVKTAMGKE 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S I+ F ++ L T+ G+DG++H + G+ + R VA + E + Sbjct: 484 ETLSTAQID----FLLPERFEL----TYIGSDGENHRPVVIHRGVVSTMERFVAFLTEET 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ +I N+ H R+ +++ ++ G V DD E++G Sbjct: 536 ---KGA-FPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQ----GVRVEIDDRNEKMGY 587 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 588 KIREAQMQKIPYQIVVGDKEVENNQVNVRKYGSQDQETVEKDEFI 632 >gi|319952066|ref|YP_004163333.1| prolyl-tRNA synthetase [Cellulophaga algicola DSM 14237] gi|319420726|gb|ADV47835.1| prolyl-tRNA synthetase [Cellulophaga algicola DSM 14237] Length = 491 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F +GK V S+G+ + R++ A++ + D KG+ Sbjct: 233 GKALQAGTSHFLGQNFAKAFDVKFTSKEGKQELVWATSWGV-STRLMGALVMTHSDDKGL 291 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV---GCDVFWDDMGE-QIGSQFAV 394 + P +AP ++ ++ I D+ E+I L ++ G V +D+ + G +FA Sbjct: 292 VLPPKLAPIQVVIVPIYKGDEQLDAISERIAPLLKELRAKGVSVKYDNRDTYKPGFKFAE 351 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++ +G + + + E+ R T +E + +E++ Sbjct: 352 YELKGVPIRLAIGQRDMDNGTFEVARRDTLEKETVQADEIV 392 Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ D +R I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 115 EEELIVRPTSETIIWDTYRRWIQSYRDLPILINQWANVVRWEMRTRL-FLRTSEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T + + +M Y Sbjct: 174 HTAHATEKEAVAEAEQMMNIY 194 >gi|261208968|ref|ZP_05923373.1| threonyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289565220|ref|ZP_06445672.1| threonyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|294615018|ref|ZP_06694907.1| threonyl-tRNA synthetase [Enterococcus faecium E1636] gi|260077007|gb|EEW64729.1| threonyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289163041|gb|EFD10889.1| threonyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|291592149|gb|EFF23769.1| threonyl-tRNA synthetase [Enterococcus faecium E1636] Length = 647 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 83/389 (21%), Positives = 155/389 (39%), Gaps = 40/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 261 GLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPM 320 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 321 DMGDGEMLVLRPMNCPHHMMVYKNTIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 380 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 381 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 425 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 426 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTE 482 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 483 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 534 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I ++ AH D +I RL G V DD E++G Sbjct: 535 YKGAFPTW---LAPIQATIIPVSVDAHG----DYAYEIKERLQMKGLRVEVDDRNEKMGY 587 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + P Q++VG K + D+ V ++ Sbjct: 588 KIRASQTQKIPYQLVVGDKELEDATVNVR 616 >gi|221197733|ref|ZP_03570779.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2M] gi|221204709|ref|ZP_03577726.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221175566|gb|EEE07996.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221181665|gb|EEE14066.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2M] Length = 635 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 81/396 (20%), Positives = 151/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ DA+ F + ++N + +S ++ G + I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMS---VYKDFGFEHIDIKLSLRPEQRA 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + E A+ G + +P E A Y + H Sbjct: 428 GTDETWDRAEQGLRDALTACGLSWEELPGEG-----------------AFYGPKIEYH-- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 + D+L + + +++ G +Y + + V + +G+M Sbjct: 469 -IKDALGRSWQCGTLQLDMVLPERLGAEY-------VAEDNSRRRPVMLHRAIVGSMERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H G +W +AP + ++NI A QV + + + L K G V D Sbjct: 521 LGILIEHHAGAMPVW---LAPVQAVVLNI-AESQV--EYAQSLAQTLQKQGVRVTADLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P ++VG K V ++ R Sbjct: 575 EKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRAR 610 >gi|326803832|ref|YP_004321650.1| threonine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] gi|326651446|gb|AEA01629.1| threonine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] Length = 651 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 90/406 (22%), Positives = 165/406 (40%), Gaps = 38/406 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G V I +++ + G + P + DL+ SG +D Y +M Sbjct: 265 QGLPFWLPNGATIRRQVERYIVDKEVQAGYQHVYTPIMADVDLYKTSGHWDHYSDDMFPT 324 Query: 97 ADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D D ++ + P + ++++ + SYR LP ++ + R E G+ R RE Sbjct: 325 MDFEDGESFVLRPMNCPHHIRVYQNKVHSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 384 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + D++ F + + K + + +H + R LS+ Sbjct: 385 MTLNDSHIF-VRLDQIKDEFKSILRFMQDAYHDFNITDYRYR---------LSYR----- 429 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPE 273 D +T+ + D M S + D + L+ E A Y DV ++ +L Sbjct: 430 DPKDTKKYFDDDEMWEKAQSMLKEAMDELGLDYFEAEGEAAFYGPKLDV---QVKTALGN 486 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD-HYVQMGSYGIGAM--RVVAAVIE 330 + +S ++ F K+ + T+ G DG++ H M GI + R VA +IE Sbjct: 487 EETLSTIQLD----FLLPEKFDV----TYVGEDGQNTHRPVMIHRGIVSTMERFVAYLIE 538 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP + LI + + D ++ R+ G + DD E++G Sbjct: 539 EY---KG-AFPTWLAPQQAILIPVNENQHA--DYVYQVANRMRSEGLRIEVDDRNEKMGY 592 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + A P Q++ G + + V ++ + E + L+E IN Sbjct: 593 KIREAQTRKVPYQLVFGDNEIENGTVTVRRYGSKKTETVDLDEFIN 638 >gi|325528727|gb|EGD05797.1| threonyl-tRNA synthetase [Burkholderia sp. TJI49] Length = 635 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 81/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ DA+ F + ++N + +S ++ G + I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMS---VYKDFGFEHIDIKLSLRPEQRA 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + E A+ G + +P E A Y + H Sbjct: 428 GTDETWDRAEQGLRDALTACGLSWEELPGEG-----------------AFYGPKIEYH-- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 + D+L + + +++ G +Y + + V + +G+M Sbjct: 469 -IKDALGRSWQCGTLQLDMVLPERLGAEY-------VAEDNSRRRPVMLHRAIVGSMERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H G W +AP ++ ++NI A Q D + + L K G V D Sbjct: 521 LGILIEHHAGAMPAW---LAPIQVVVMNI-AESQA--DYAQSLAQTLQKQGVRVTADLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P ++VG K V ++ R Sbjct: 575 EKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRAR 610 >gi|293556705|ref|ZP_06675269.1| threonyl-tRNA synthetase [Enterococcus faecium E1039] gi|291601167|gb|EFF31455.1| threonyl-tRNA synthetase [Enterococcus faecium E1039] Length = 646 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 83/389 (21%), Positives = 155/389 (39%), Gaps = 40/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 261 GLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPM 320 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 321 DMGDGEMLVLRPMNCPHHMMVYKNTIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 380 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 381 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 425 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 426 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTE 482 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 483 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 534 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I ++ AH D +I RL G V DD E++G Sbjct: 535 YKGAFPTW---LAPIQATIIPVSVDAHG----DYAYEIKERLQMKGLRVEVDDRNEKMGY 587 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + P Q++VG K + D+ V ++ Sbjct: 588 KIRASQTQKIPYQLVVGDKELEDATVNVR 616 >gi|255004741|ref|ZP_05279542.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Virginia] Length = 636 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 9/199 (4%) Query: 14 NPRDAEIASHKLMLR-TGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 N ++AE H+ + + G H ++ G W G + IR + + G +E+ Sbjct: 236 NMQEAEKRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRIIEEYIRCKLKKHGYLEVK 295 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + LW +SG ++ + + M + D + K + P + IF+S I+SY+ LP Sbjct: 296 TPIMLDRKLWEKSGHWEKFKENMFVVED-DKKELAIKPMNCPCHVQIFKSKIRSYKELPI 354 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + + R+E +G+MR R F DA+ F T E + + + + ++ G Sbjct: 355 RMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIF-CTHEQVRDEVLRFYELLMEVYKDFG 413 Query: 190 LKSIPMRAESGP---IGGD 205 S+ ++ P IG D Sbjct: 414 FDSVTVKLSDRPENRIGSD 432 >gi|269125121|ref|YP_003298491.1| prolyl-tRNA synthetase [Thermomonospora curvata DSM 43183] gi|268310079|gb|ACY96453.1| prolyl-tRNA synthetase [Thermomonospora curvata DSM 43183] Length = 477 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 5/148 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y GT ++ + ++ +G Y S+G+ + R++ VI + D KG+ Sbjct: 215 GRALQAGTSHYLGTNFAKAFNIQYQDEEGALQYAHTTSWGM-STRMIGGVIMTHGDDKGL 273 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACE--KIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P +AP+++ ++ I +Q A E ++ A + +G V DD Q+ F D Sbjct: 274 VLPPRLAPYQVVIVPIGRKEQGEATAAEARRLGAAIKSMGIRVHVDDNRPQLSPGFKFND 333 Query: 397 --LLGFPLQVIVGSKFVSDSKVEIKHRL 422 + G P+++ +G + ++D + RL Sbjct: 334 WEMRGVPIRIEIGPRDLADGVGTLARRL 361 >gi|332521036|ref|ZP_08397494.1| threonyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4] gi|332043129|gb|EGI79326.1| threonyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4] Length = 644 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 84/432 (19%), Positives = 163/432 (37%), Gaps = 63/432 (14%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T + G+ WLP G + + ++ Q + G Sbjct: 229 YLALLEEAKKRDHRKLGKELELFT-FSQKVGAGLPLWLPKGTALRERLENFLKAAQKKAG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +L+V SG Y YG++ + ++D+ + P + +I+ + Sbjct: 288 YEMVMSPHIGQKELYVTSGHYAKYGEDSFQPIKTPKDDEEFLLKPMNCPHHCEIYNASQW 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + + +R E G+ R R F DA+ F TP+ + + L Sbjct: 348 SYKDLPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLF-CTPDQLDAEFKNVIDLVL 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F LG ++ + + L D + + Sbjct: 407 YVFGSLGFENFTAQ--------------VSLRDPENPEKYIGS----------------- 435 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT-- 292 +E W A +K + + E + G + +G + GT Sbjct: 436 ------LENWEKAEQAIISAAKDKGLNYVIETGEAAFYGPKLDFMVKDALGRQWQLGTIQ 489 Query: 293 -KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y+LP T+KG+D + H V + G+M A++ G +W + P + Sbjct: 490 VDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFIAILLEHTGGNFPLW---LMPNQ 546 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 +S++ + + EK+ L D+ E IG + A++ P +I+G Sbjct: 547 VSILTL---SEKYEKYGEKVLNLLENHEIRALIDNRSETIGKKIREAEMNKTPYMIIIGE 603 Query: 409 KFVSDSKVEIKH 420 ++K+ ++ Sbjct: 604 NEEKENKISVRQ 615 >gi|222528807|ref|YP_002572689.1| threonyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222455654|gb|ACM59916.1| threonyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 647 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 83/407 (20%), Positives = 165/407 (40%), Gaps = 44/407 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G K L + + +E+ + G + P + +DL+ SG +D Y M + Sbjct: 264 QGLPLLMPKGAKILQILQRFVEDEEEKRGYLLTKTPYMAKSDLYKISGHWDHYRDGMFVI 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P I+ S +SYR+LP + + FR+E G++R R+F Sbjct: 324 EEDENEVLALRPMTCPFQFLIYNSKQRSYRDLPIRYSETSTLFRNESSGEMHGLIRVRQF 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ P+ + + + I LG+++ D+ + F Sbjct: 384 TLSDAHII-CRPDQVEEEFKGVLDLIQYIMKILGIEN------------DIWYRFSRWDP 430 Query: 216 TGETQVFCSKDFMDFPIPSENTDFD-----DIISLNSIVEQWTAP-YAATSDVHNEKLFD 269 + + ++D P E T+ D D + +N + A Y D+ + ++ Sbjct: 431 NNKEK------YIDNPEAWEKTENDMKNILDKLGINYKEAKGEAAFYGPKLDIQFKNVY- 483 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAV 328 K + I++ F ++ + T+ DG K + + IG A+ Sbjct: 484 ----GKEDTIITIQID--FALAERFDM----TYVDRDGQKKRPIIIHRSSIGCYERTLAM 533 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + ++G +W +AP +I +I + + + + + L + G V D E + Sbjct: 534 LIEKYNGAFPLW---LAPVQIRVIPVSDN---FNEYAKNVARILKENGFRVEEDYRSETV 587 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + A L P VIVG K ++ V ++ R G ++E+ I Sbjct: 588 GYKIRDAQLQKIPYMVIVGEKEQKENTVAVRDRKKGDLGSFTIEDFI 634 >gi|84516459|ref|ZP_01003818.1| threonyl-tRNA synthetase [Loktanella vestfoldensis SKA53] gi|84509495|gb|EAQ05953.1| threonyl-tRNA synthetase [Loktanella vestfoldensis SKA53] Length = 648 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 88/432 (20%), Positives = 161/432 (37%), Gaps = 68/432 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R Q G +E++ P + LW +SG +D Y + Sbjct: 260 MQEEAPGQVFWHPDGWTIYTELQDYMRRRQRAGGYVEVNTPQVVDRKLWEKSGHWDKYQE 319 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF +KSYR+LP + R E Sbjct: 320 NMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCARYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSF----DLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESG 200 G+MR R F D + F + PE ++ F+++L R++ LG ++ + Sbjct: 380 LHGIMRVRGFTQDDGHIFCREDQIEPETAR------FIAFLSRVYADLGFNDWTIKLSTR 433 Query: 201 P---IGGDLSHEFI--VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 P IG D + + + L D C DF ++E A Sbjct: 434 PEQRIGSDATWDMMEKALGDA------CRAAGYDF----------------ELLEGEGAF 471 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-V 312 Y + L D++ N + ++ +LP + A + G DG+ H V Sbjct: 472 YGPKLEF---TLTDAIGRNWQCGTLQVDA----------NLPERLDAEYIGTDGEKHRPV 518 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYAR 371 + +G+ ++ H GK W +AP ++ + I + D RD + A Sbjct: 519 MLHRATLGSFERFIGILIEEHAGKLPFW---LAPRQVVVATIVSDADDYARD----LVAA 571 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G D E+I + + P+ + VG++ V + + +++ Sbjct: 572 LTAAGVRAEADTRNEKINYKVREHSVGKVPVILAVGAREVEERTATARQLGETQTRVVTM 631 Query: 432 EEVINYASHRFS 443 +E++ R + Sbjct: 632 DEIVAELKQRAT 643 >gi|295693387|ref|YP_003601997.1| threonyl-tRNA synthetase [Lactobacillus crispatus ST1] gi|295031493|emb|CBL50972.1| Threonyl-tRNA synthetase [Lactobacillus crispatus ST1] Length = 645 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 87/405 (21%), Positives = 160/405 (39%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I + + G + P L + D + SG + Y +M Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALDQVQTEFAKILKLIMDVYKDFDITDYYFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M D + L+ + E A Y D+ + +L + Sbjct: 425 PKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFGL----TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N+ AH + EK+ L+K G D E++G + Sbjct: 534 KGAFPTW---LAPVQVEIIPVNLDAHGEY----AEKVRQELAKRGFRAEVDTRNEKMGYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G + + V ++ T MSL++ I Sbjct: 587 IRESQTQKVPYTLVLGDDEMKANGVNVRPYGTDQENSMSLDDFIK 631 >gi|221214904|ref|ZP_03587872.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD1] gi|221165131|gb|EED97609.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD1] Length = 635 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 81/396 (20%), Positives = 151/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ DA+ F + ++N + +S ++ G + I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMS---VYKDFGFEHIDIKLSLRPEQRA 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + E A+ G + +P E A Y + H Sbjct: 428 GTDETWDRAEQGLRDALTACGLSWEELPGEG-----------------AFYGPKIEYH-- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 + D+L + + +++ G +Y + + V + +G+M Sbjct: 469 -IKDALGRSWQCGTLQLDMVLPERLGAEY-------VAEDNSRRRPVMLHRAIVGSMERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H G +W +AP + ++NI A QV + + + L K G V D Sbjct: 521 LGILIEHHAGAMPVW---LAPVQAVVLNI-AESQV--EYAQSLAQTLQKQGVRVTADLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P ++VG K V ++ R Sbjct: 575 EKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRAR 610 >gi|126651780|ref|ZP_01723982.1| prolyl-tRNA synthetase [Bacillus sp. B14905] gi|126591458|gb|EAZ85565.1| prolyl-tRNA synthetase [Bacillus sp. B14905] Length = 483 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 81/161 (50%), Gaps = 5/161 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + + ++ G Y GTK++ + + + YV S+G + R++ +VI D +G Sbjct: 219 NGKAVQAGTSHYLGTKFAEAFNIKYLNKANQHEYVHTTSWGT-STRLIGSVIMVHGDEQG 277 Query: 338 IIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 ++ P +AP ++ LI + K + Q+ + + I+A L G V DD + G +F Sbjct: 278 LVLPPRIAPTQVVLIPVGPWKKNPQIM-EQLDAIFAALKAKGIRVRLDDSDQSPGFKFNE 336 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++ +G + + +++ +K R ++ + L ++ Sbjct: 337 WELKGVPVRIELGPRDLENNQALLKARDEDDKQTIELSTIV 377 >gi|315641145|ref|ZP_07896224.1| threonine--tRNA ligase [Enterococcus italicus DSM 15952] gi|315483153|gb|EFU73670.1| threonine--tRNA ligase [Enterococcus italicus DSM 15952] Length = 650 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 91/416 (21%), Positives = 166/416 (39%), Gaps = 48/416 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + + P + +L+ SG +D Y ++M Sbjct: 261 GLPFWLPKGATIRRIIERYIVDKEVSLGYMHVYTPIMADVNLYKTSGHWDHYHEDMFPPM 320 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 321 DMGDGEMLVLRPMNCPHHIMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 380 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + ++ G+ R LS+ D Sbjct: 381 TLNDGHTF-VRPDQIKEEFKRTLDLMTAVYKDFGIDDYRFR---------LSYR-----D 425 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M D + L+ E A Y DV ++ +L Sbjct: 426 PNNTDKYFDDDKMWENAQKMIKAAMDELGLDYFEAEGEAAFYGPKLDV---QVKTALGME 482 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD-HYVQMGSYGI-GAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ H M GI M A + Sbjct: 483 ETLSTIQLD----FLLPERFEL----TYVGEDGENSHRPVMIHRGIVSTMERFVAYLTEV 534 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP ++ +I ++ AH + + E RL + G D E++G Sbjct: 535 YKGAFPTW---LAPVQVEIIPVSVDAHSEYAYEVKE----RLLEKGIRAEVDGRNEKMGY 587 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKH---RLTGIRE-----DMSLEEVINYA 438 + A P Q++VG + ++D+ V I+ + T + E D + +V NY+ Sbjct: 588 KIRAAQTQKIPYQLVVGDQEMNDATVNIRRYGSKETAVEELNMFVDAIVADVQNYS 643 >gi|292493207|ref|YP_003528646.1| threonyl-tRNA synthetase [Nitrosococcus halophilus Nc4] gi|291581802|gb|ADE16259.1| threonyl-tRNA synthetase [Nitrosococcus halophilus Nc4] Length = 644 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 154/406 (37%), Gaps = 47/406 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P+G + + RE G + P + LW SG D Y + M + Sbjct: 262 GLVFWHPMGARIRQVIEDFWRERHRAAGYETLYTPHIAHQQLWQTSGHTDFYRESMYQPM 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + + P + +++ ++SYR LP + ++ +R E+ G+MR R F Sbjct: 322 EEDHQLYQLKPMNCPFHVLVYKGRLRSYRELPLRWAELGTVYRHEMSGALHGLMRVRGFT 381 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ F E + + L + G + + + P +G D E Sbjct: 382 QDDAHIF-CREEQIEDEILGILDLTLEMLSAFGFERYEVDLSTRPEKSVGSDAIWERATQ 440 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 A + K +D+ + F Y D+ K+ D++ Sbjct: 441 A----LRSALEKKGLDYAVDEGGGAF----------------YGPKIDI---KIEDAIGR 477 Query: 274 NKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIE 330 + S ++ ++LP + DG H + + +G++ V+ Sbjct: 478 KWQCSTVQLD----------FNLPERFEMEYVAEDGARHQPIMIHRAVLGSLERFFGVLI 527 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 ++GK +P +AP +++++NI D+ AC+ + L G D E+IG Sbjct: 528 EHYEGK---FPPWLAPVQVAVMNIT--DRQAEYACQ-VEETLKNKGFRSLLDLRNEKIGF 581 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + L P +++G + V + V ++ R + MSL+ I Sbjct: 582 KIREHTLRRVPYLLVIGDREVENQTVAVRTRYSKDLGAMSLDAFIE 627 >gi|195443008|ref|XP_002069231.1| GK21088 [Drosophila willistoni] gi|194165316|gb|EDW80217.1| GK21088 [Drosophila willistoni] Length = 699 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 83/409 (20%), Positives = 167/409 (40%), Gaps = 44/409 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G + P G + + ++ E + G E+ P + +A LW+ SG + Y + Sbjct: 314 HELSPGSCFFQPRGAHIYNTLMNFMKAEYRKRGFQEVISPNIYNAKLWMTSGHWQHYAEN 373 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +K + P + IF + +S+R LP + R+EL G+ R Sbjct: 374 MFSFEVEKEKFAL-KPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLTR 432 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F TP+ K +++ G S + + P Sbjct: 433 VRRFQQDDAHIF-CTPDQIKSEMKGCLDFLHHVYNIFGF-SFQLVLSTRP-----EKYLG 485 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 L + + ++ +F IP + D A Y D+ + D+L Sbjct: 486 ELEQWNDAEKALAESLDEFGIPWKENPGD------------GAFYGPKIDI---TIMDAL 530 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIE 330 + + ++ F +++L + DG K V + +G++ + A++ Sbjct: 531 KRAHQCATIQLD----FQLPIRFNL----NYIADDGEKKRPVIIHRAILGSVERMIAILT 582 Query: 331 SSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYAR--LSKVGCDVFWDDMGEQ 387 ++ GK WP ++P ++ ++ + A+D+ + E+++A +S+ CD G+ Sbjct: 583 ENYAGK---WPFWLSPRQVMVVPVGPAYDEYAQSVREQLHAAGFMSEADCDA-----GDT 634 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + + A L F ++VG K S + V ++ R + ++S+ E+I+ Sbjct: 635 MNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELIS 683 >gi|46199818|ref|YP_005485.1| threonyl-tRNA synthetase [Thermus thermophilus HB27] gi|73919837|sp|Q72HH1|SYT_THET2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|46197445|gb|AAS81858.1| threonyl-tRNA synthetase [Thermus thermophilus HB27] Length = 659 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 6/166 (3%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM-- 93 KG+ WLP G + + A +REEQ R G ++ P + S +L+ SG Y Y + Sbjct: 270 GKGLVLWLPKGNVVREELMAFMREEQVRRGYQLVTTPHIGSLELYKTSGHYPYYAESQFP 329 Query: 94 -LRLADRN-DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVM 150 + +R ++ + P + I+ +SYR LP + +R E G+ Sbjct: 330 PISFKERGEEEEYLLKPMNCPHHIRIYAYRKRSYRELPLRLAEFGTVYRYEKAGELLGLT 389 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R R F DA+ F TPE K + + L++F LGLK R Sbjct: 390 RVRGFTQDDAHIF-CTPEEVKGEFLGVLDLVLKVFATLGLKDYRAR 434 >gi|124516423|gb|EAY57931.1| Threonyl-tRNA synthetase [Leptospirillum rubarum] Length = 617 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 1/133 (0%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ WLP G + + + + +R G + P + DLW++SG +D Y Sbjct: 228 LDEKGAGLVLWLPRGSQIRRTLEELWKILHDRHGYRYVYTPHIARLDLWMQSGHWDYYQD 287 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M R + A P + IFR ++SYR+LP ++ +R E G+M Sbjct: 288 SMFRPMETEGTAYELKPMNCPFHILIFRESVQSYRDLPIRLSELGTVYRYERSGTLHGLM 347 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 348 RVRGFTQDDAHIF 360 >gi|310829146|ref|YP_003961503.1| hypothetical protein ELI_3581 [Eubacterium limosum KIST612] gi|308740880|gb|ADO38540.1| hypothetical protein ELI_3581 [Eubacterium limosum KIST612] Length = 483 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 74/408 (18%), Positives = 153/408 (37%), Gaps = 76/408 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG P G +N+ E TG M P L L E+ + + E+ Sbjct: 39 KGFMVIRPYGYAIWENIQKAYDERFKATGHQNMYFPLLIPESLLKKEAEHVEGFAPEVAW 98 Query: 96 LADRNDK----AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + DK + PT E ++ ++ + SYR LPF + Q +++ RP Sbjct: 99 VTKGGDKELAEPLCVRPTSETIICSMYAKWLHSYRQLPFLYNQWCSVVRWEKTTRP---F 155 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ TPE ++ +M Y + + +IP Sbjct: 156 LRTSEFLWQEGHTLHETPEEAQEETMQMLNIYREVAE--DIMAIP--------------- 198 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 +V+ E + F A Y + +H+ Sbjct: 199 -VVVGQKSEKEKFAGA---------------------------AATYTMEALMHD----- 225 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 + ++ G G ++ T+ + + Y S+G+ + R++ +I Sbjct: 226 ---------GQALQSGTSHNLGQHFTKAFDITYLDRNNEQAYPYHTSWGV-STRLIGGII 275 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS---KVGCDVFWDDMGE 386 D G++ P +AP ++ +I + H + D ++ L +V D D+ Sbjct: 276 MVHGDDNGLVLPPRIAPTQLVIIPVAQHKEGVLDKAYELKDILGAEFRVELD---DNDSN 332 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F ++ G P+++ +G + + + + + R TG + ++L+++ Sbjct: 333 SPGWKFNQWEMKGVPIRLEIGPRDIENGQCVLARRDTGEKVQVALDDI 380 >gi|124010058|ref|ZP_01694720.1| threonyl-tRNA synthetase [Microscilla marina ATCC 23134] gi|123983945|gb|EAY24340.1| threonyl-tRNA synthetase [Microscilla marina ATCC 23134] Length = 578 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 82/393 (20%), Positives = 143/393 (36%), Gaps = 77/393 (19%) Query: 15 PRDAEIASHKLMLRTGMIHQH----------------SKGIYSWLPLGQKALDNVNAIIR 58 P+ E+ H +L H KG+ WLP G + + +R Sbjct: 227 PKQKELKEHLALLEEAKKRDHRKLGKELELFTFSERVGKGLPLWLPKGALLRERLENFMR 286 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTD 116 Q + G + P + S L+ SG ++ YG++ + + + + P + + Sbjct: 287 RAQIKAGYSPVVTPHIGSKKLYETSGHWEKYGEDSFQPIATPQEGEEFMLKPMNCPHHCE 346 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+ S +SY++LP + +R E G+ R R F DA+ F TP K + Sbjct: 347 IYASKPRSYKDLPLRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CTPAQVKEEFG 405 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 K+ L +F LG + + I L D + KD Sbjct: 406 KVIDLVLYVFSALGFEDYTAQ--------------ISLRDPENKSKYFGKD--------- 442 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI-------- 287 E W A DV +K ++ E + G ++ + Sbjct: 443 --------------EDWEQAEQAIIDVAAQKGLQTVTELGEAAFYGPKLDFMVKDALKRK 488 Query: 288 FYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 + GT Y LP + G+D + H V + G++ AV+ GK +W Sbjct: 489 WQLGTVQLDYQLPDRFELEYTGSDNERHRPVMIHRAPFGSLERFIAVLTEHCAGKFPLW- 547 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 +AP +I+++ I Q D +++YA+L + Sbjct: 548 --LAPEQIAILPI---SQKFHDYAQEVYAQLEE 575 >gi|114767278|ref|ZP_01446118.1| threonyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601] gi|114540584|gb|EAU43657.1| threonyl-tRNA synthetase [Roseovarius sp. HTCC2601] Length = 649 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 86/406 (21%), Positives = 151/406 (37%), Gaps = 64/406 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G W P G ++ +R +Q+R G +E++ P + LW SG +D+Y + Sbjct: 260 LQPEAPGQIFWHPNGWTIYTSLQDYMRRQQHRDGYVEVNTPQVVDRKLWEASGHWDNYQE 319 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF S +KSYR+LP + R E Sbjct: 320 NMFIVEVDEEHAREKSINALKPMNCPCHVQIFNSGLKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP--- 201 G+MR R F DA+ F + + K F+ +L I+ LG + ++ + P Sbjct: 380 LHGIMRVRGFTQDDAHIF--CTDDQIEAETKKFIEFLAGIYADLGFHNWTIKLSTRPEKR 437 Query: 202 IGGDLSHEFI--VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 IG + S + + L D C F + F Sbjct: 438 IGSEESWDRVEAALGDA------CKAAGYGFELQEGEGAF-------------------- 471 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP-----MSATFKGADGKDHY-VQ 313 + KL +L + +G + GT P + A++ G DG+ H V Sbjct: 472 ---YGPKLEFTLTDA---------IGREWQCGTLQVDPNLPDRLDASYIGQDGEKHRPVM 519 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 + +G+ ++ H GK W +AP ++ + +I + D ++ A L Sbjct: 520 LHRAVLGSFERFIGILIEEHAGKLPFW---LAPRQVVVASITSE---ADDYVHEVVAELK 573 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 G D E+I + + P+ + VG + V + V ++ Sbjct: 574 AAGVRAEADIRNEKINYKVREHSVGKVPVILAVGHREVEERTVTVR 619 >gi|262047409|ref|ZP_06020366.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|260572383|gb|EEX28946.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] Length = 644 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 87/405 (21%), Positives = 160/405 (39%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I + + G + P L + D + SG + Y +M Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALDQVQTEFAKILKLIMDVYKDFDITDYYFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M D + L+ + E A Y D+ + +L + Sbjct: 425 PKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFGL----TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N+ AH + EK+ L+K G D E++G + Sbjct: 534 KGAFPTW---LAPVQVEIIPVNLDAHGEY----AEKVRQELAKRGFRAEVDTRNEKMGYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G + + + V ++ T SL + IN Sbjct: 587 IRESQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLTDFIN 631 >gi|300023435|ref|YP_003756046.1| prolyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299525256|gb|ADJ23725.1| prolyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 510 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 72/324 (22%), Positives = 121/324 (37%), Gaps = 64/324 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ D F+ IKSYR+LP Q R E+R R +R+ EFL ++ Sbjct: 115 EEPLIVRPTSETIIGDAFQRWIKSYRDLPLLVNQWANVVRWEMRTRL-FLRTAEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ + + KM Y R F L ++P+ A P Sbjct: 174 HTAHADKDDAVAETLKMLEVY-RTFAEDVL-AMPVIAGEKPAN----------------- 214 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 FP D+ S+ ++++ A A TS Sbjct: 215 -------ERFP------GADNTYSIEAMMQDGKALQAGTS-------------------- 241 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 Y GT ++ + F+ ADGK Y S+G+ + R++ VI + D G+ Sbjct: 242 -------HYLGTHFAEAQNIQFQNADGKLTYCHTTSWGV-STRLIGGVIMTHGDDDGLRL 293 Query: 341 PDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 P ++AP +I ++ + K D + C + L G D + + Sbjct: 294 PPAIAPRQIVIVPMLREKPEDAALIEYCAALEKDLKAAGIRTLVDAKAVKSAEKRWNWVR 353 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 G P+ V +G + S V R Sbjct: 354 RGAPVIVEIGGRDASGGNVTFMRR 377 >gi|42560874|ref|NP_975325.1| prolyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81829401|sp|Q6MTR9|SYP_MYCMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|42492371|emb|CAE76967.1| proline-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 474 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 79/392 (20%), Positives = 157/392 (40%), Gaps = 73/392 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG + P G + + + + EE + + P L L+ E + + E+ Sbjct: 35 KGTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIEGFSPEIAT 94 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + + ++ + PT E VM D F + I SYR+LP + Q +++ RP Sbjct: 95 VTRVGQKKLEENLFIRPTSEVVMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTTRP---F 151 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ SYN+ L+I + I + E Sbjct: 152 LRTSEFLWQEGHTI-------HSSYNEAENFCLKILN---------------IYEKFAKE 189 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 ++L V C K +E F A D + Sbjct: 190 ILLLP------VICGK-------KTEKEKF-----------------AGAKDTYT----- 214 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 E+ + ++ G +F ++ F+ + K + S+G+ + R++ A+I Sbjct: 215 --IESLMFDGQALQCGTSHFFADNFTKVYDIKFQNKENKLEHAYSTSWGV-STRLIGALI 271 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + D G++ P ++P +I +I IK +Q+ E I +LS DV D+ + G Sbjct: 272 MTHSDDNGLVLPSKISPIQIQIIQIKNTEQI-DQVVENIKDKLSDYRIDV--DNSDKSFG 328 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + A++ G P+++ +G + + ++++ I R Sbjct: 329 FKISEAEIKGIPIRIEIGPRDLENNQITISRR 360 >gi|147671507|ref|YP_001215778.1| threonyl-tRNA synthetase [Vibrio cholerae O395] gi|262168212|ref|ZP_06035910.1| threonyl-tRNA synthetase [Vibrio cholerae RC27] gi|172047342|sp|A5EZ18|SYT_VIBC3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146313890|gb|ABQ18430.1| threonyl-tRNA synthetase [Vibrio cholerae O395] gi|227014955|gb|ACP11164.1| threonyl-tRNA synthetase [Vibrio cholerae O395] gi|262023455|gb|EEY42158.1| threonyl-tRNA synthetase [Vibrio cholerae RC27] Length = 642 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 85/397 (21%), Positives = 145/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G + IR + N G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSVFRELEIFIRHKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S MD P I E A Y + L Sbjct: 433 ----EIWDKSEQALIDSLKAMDIPF--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVVVNITDKQA---DYAHEVAQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 576 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 612 >gi|65317824|ref|ZP_00390783.1| COG0442: Prolyl-tRNA synthetase [Bacillus anthracis str. A2012] Length = 383 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FGT +S F +GK YV S+G+ + R++ +I D G+ Sbjct: 98 GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGLIMVHSDNNGL 156 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P VAP ++ ++ I H + ++ + KV V D + G +F ++ Sbjct: 157 VMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTPGWKFNEYEMK 215 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+++ VG K + ++V + R T +E +S++++ Sbjct: 216 GIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 251 >gi|227877040|ref|ZP_03995129.1| theronyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256843644|ref|ZP_05549132.1| threonyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256850110|ref|ZP_05555540.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|293381761|ref|ZP_06627738.1| threonyl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|227863358|gb|EEJ70788.1| theronyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256615064|gb|EEU20265.1| threonyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256713082|gb|EEU28073.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|290921681|gb|EFD98706.1| threonyl-tRNA synthetase [Lactobacillus crispatus 214-1] Length = 644 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 87/405 (21%), Positives = 160/405 (39%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I + + G + P L + D + SG + Y +M Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALDQVQTEFAKILKLIMDVYKDFDITDYYFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M D + L+ + E A Y D+ + +L + Sbjct: 425 PKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFGL----TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N+ AH + EK+ L+K G D E++G + Sbjct: 534 KGAFPTW---LAPVQVKIIPVNLDAHGEY----AEKVRQELAKRGFRAEVDTRNEKMGYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G + + + V ++ T SL + IN Sbjct: 587 IRESQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLTDFIN 631 >gi|260597637|ref|YP_003210208.1| threonyl-tRNA synthetase [Cronobacter turicensis z3032] gi|260216814|emb|CBA30296.1| Threonyl-tRNA synthetase [Cronobacter turicensis z3032] Length = 642 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 84/400 (21%), Positives = 147/400 (36%), Gaps = 54/400 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHVF-CTEEQVRDEVNSCIRMVYDMYSTFGFEKIVVKLSTRPEKRIGTD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 + D E + + + + P P E + I Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQPGEGAFYGPKIEFT------------------ 469 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 L+D L R + G + +SLP +SA++ G + + M I G+ Sbjct: 470 --LYDCLD-------RAWQCGTV---QLDFSLPARLSASYVGENNERQVPVMIHRAILGS 517 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 M ++ G +P +AP ++ ++NI + ++ +L G V Sbjct: 518 MERFIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTRKLQNAGIRVKA 571 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + L P ++ G K V KV ++ R Sbjct: 572 DLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 611 >gi|225016667|ref|ZP_03705859.1| hypothetical protein CLOSTMETH_00576 [Clostridium methylpentosum DSM 5476] gi|224950631|gb|EEG31840.1| hypothetical protein CLOSTMETH_00576 [Clostridium methylpentosum DSM 5476] Length = 646 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 88/460 (19%), Positives = 174/460 (37%), Gaps = 68/460 (14%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD + KL T + +G+ LP G + + + + +E+ + G Sbjct: 232 YLAAVEEAKKRDHNVIGRKLGYFT-TVDVIGQGLPVLLPKGARVIQILQRFVEDEEEKRG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIK 123 + P +D + SG + Y + M + D ++ P + + ++ Sbjct: 291 YLLTKTPYFAKSDFYKISGHWQHYREGMFVMGDEEKDKEVFALRPMTCPFQFQAYLNEMR 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + FR+E G++R R+F + + + P+ + + + Sbjct: 351 SYRDLPLRYNETSTLFRNEASGEMHGLIRVRQFTISEGH-LACRPDQVEEEFKQCLELAK 409 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + LGL D+++ F + + S + E + ++ Sbjct: 410 FMLETLGLDE------------DVTYRFSKWDENNRDKYIGSAE--------EWENVQNL 449 Query: 243 IS--LNSIVEQWT------APYAATSDVHNEKLF---DSLPENKRVSARGIEVGHIFYFG 291 + LN + +T A Y D+ + ++ D+L I + F Sbjct: 450 MRGILNHLELDYTEADGEAAFYGPKLDIQIKNVYGKEDTL----------ITIQIDFQLA 499 Query: 292 TKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 +++ + + T DG+ Y + +G A++ + G +W +AP + Sbjct: 500 SRFDMVYTDT----DGQKKYPYVIHRTSLGCYERTLALLLEKYAGALPLW---IAPEQAR 552 Query: 351 LINI--KAHDQ--VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 ++ I + HD CRD L K G V DD E+IG + A L P +++ Sbjct: 553 ILPIGERQHDAAYACRD-------ELRKAGLRVEVDDRSEKIGYKIREAQLEKIPYMLVI 605 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 G K V + V ++ R G +M V + H + R Sbjct: 606 GDKEVEANAVSVRSRKHG---EMGAMPVTQFMEHALNEVR 642 >gi|210623612|ref|ZP_03293938.1| hypothetical protein CLOHIR_01888 [Clostridium hiranonis DSM 13275] gi|210153482|gb|EEA84488.1| hypothetical protein CLOHIR_01888 [Clostridium hiranonis DSM 13275] Length = 638 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 92/400 (23%), Positives = 151/400 (37%), Gaps = 47/400 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI + G LP G + + RE +E+ P + + LW SG + Y Sbjct: 253 MIPEEGPGFPLMLPKGMALKNALLEYWREVHRAAEYVEIETPIILNRKLWETSGHWYHYK 312 Query: 91 KEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M + D D A+ P + ++S + SYR+ P ++ R EL G Sbjct: 313 ENMYTVKIDEEDYAI--KPMNCPGGMLYYKSEMHSYRDFPMRVAELGRVHRHELSGALHG 370 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGD 205 +MR R F DA+ F + PE + + I+ G + + R E +G D Sbjct: 371 LMRVRAFTQDDAHIF-MLPEQIRDEIKGVISLIDGIYKTFGFEYHLELSTRPEDS-MGSD 428 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 E E + + + ++ P D A Y D H Sbjct: 429 EEWE------AAENGLRGALEELNLPFVVNEGD--------------GAFYGPKIDFH-- 466 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRV 324 L D + R + G I + AT+ G DG+ H V + G++ Sbjct: 467 -LTDCI-------GRTWQCGTI-QLDMQLPRQFDATYIGQDGEKHRPVMIHRVAFGSIER 517 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + GK +W +AP ++ +I I D+ D EK+ L G V D Sbjct: 518 FIGILIEQYAGKFPVW---LAPTQVKIIPIS--DKYA-DYAEKVRKELFDNGLRVEVDGR 571 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G + A L P VIVG K +++ + ++ R G Sbjct: 572 VEKVGFKIREAQLEKVPYMVIVGEKEEAENNISVRSRDEG 611 >gi|320167861|gb|EFW44760.1| threonyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864] Length = 726 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 86/415 (20%), Positives = 162/415 (39%), Gaps = 54/415 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + + IR E G E+ P + ++ LW +SG + Y Sbjct: 327 FFHELSPGSCFFLPHGTRIYNTLMEFIRSEYWARGFTEVITPNMYNSKLWQQSGHWQHYA 386 Query: 91 KEMLRLADRNDKAMIY---GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 + M +K + P H + FRSH + LP F + R+E Sbjct: 387 ENMFSFDIEKEKFALKPMNCPGHCLMFDQAFRSH----KELPIRFADFGVLHRNEASGAL 442 Query: 148 -GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--G 204 G+ R R F DA+ F + + N + ++L+ + + + ++ + P G G Sbjct: 443 TGLTRVRRFQQDDAHIFCKPSDIANEIDNAL--AFLKAVYTVFGFTFQLKLSTRPEGFLG 500 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 D I L D E Q+ + F P + D A Y D+ Sbjct: 501 D-----IALWDKAEKQL--EESLNKFGAPWKLNPGDG------------AFYGPKIDI-- 539 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMR 323 + D+L + + + ++ FG KY P DG + V + +G++ Sbjct: 540 -TIMDALRRSHQCATIQLDFQLPIRFGLKYQAP--------DGTEQTPVIIHRAILGSVE 590 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV---F 380 + A++ + GK WP ++P + +I + + C D ++ +L G V Sbjct: 591 RMIAILTENFAGK---WPFWLSPRQALVIAV---SKDCNDYAHEVQKQLHDAGFHVDYDL 644 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 W D E + + A L + ++VG++ ++ R + + ++ ++I Sbjct: 645 WPD--ETLNKKVRNAQLAQYNFILVVGARERESRSANVRTRDNKVHGERTIPQLI 697 >gi|294101290|ref|YP_003553148.1| prolyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] gi|293616270|gb|ADE56424.1| prolyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] Length = 479 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 24/170 (14%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G +S F+ G+ Y S+G+ + R++ A+I + D G+I Sbjct: 220 KALQAGTSHFLGQNFSRAFDIQFQNQKGEQEYAWTTSWGV-STRLIGALIMTHSDNDGLI 278 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD--- 396 P VAP +++++ I +D V E++ R + F D + + +G +F D Sbjct: 279 LPPRVAPVQVAILPISTNDSVME---EQLLPRALE-----FSDKLDQMLGGRFTFVDKQF 330 Query: 397 ------------LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ +G K ++ V R TG +ED+ E V Sbjct: 331 HMRPGDRFFYHLQKGVPLRLELGEKDLAAGTVRAVRRDTGSKEDIPFENV 380 Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E V+ ++ I+S+R+LP Q R E RPR +R+ EFL ++ Sbjct: 101 EEPLVVRPTSETVIGHMYSKWIQSWRDLPILINQWANVMRWEKRPRL-FLRTSEFLWQEG 159 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRI 184 ++ T E + KM Y RI Sbjct: 160 HTAHATEEEAMEETLKMLEVYRRI 183 >gi|24583842|ref|NP_723726.1| Threonyl-tRNA synthetase, isoform C [Drosophila melanogaster] gi|28574141|ref|NP_524839.3| Threonyl-tRNA synthetase, isoform B [Drosophila melanogaster] gi|7297922|gb|AAF53167.1| Threonyl-tRNA synthetase, isoform B [Drosophila melanogaster] gi|22946308|gb|AAN10805.1| Threonyl-tRNA synthetase, isoform C [Drosophila melanogaster] Length = 690 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 84/409 (20%), Positives = 169/409 (41%), Gaps = 44/409 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G + P G + + I+ E + G E+ P + +A LW+ SG + Y + Sbjct: 304 FHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNIYNAKLWMTSGHWQHYAE 363 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M +K + P + IF + +S+R LP + R+EL G+ Sbjct: 364 NMFSFEAEKEKFAL-KPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLT 422 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F PE K S K + +L+ + + S + + P + Sbjct: 423 RVRRFQQDDAHIF-CAPEQIK-SEMKGCLEFLKYVYTIFGFSFQLVLSTRP-----DNYL 475 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 L + + ++ +F +P + D A Y D+ + D+ Sbjct: 476 GELEQWNDAEKALAESLNEFGMPWKENPGDG------------AFYGPKIDI---TIMDA 520 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVI 329 L + + ++ F +++L ++ DG K V + +G++ + A++ Sbjct: 521 LKRAHQCATIQLD----FQLPIRFNL----SYIADDGEKKRPVIIHRAILGSVERMIAIL 572 Query: 330 ESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIY--ARLSKVGCDVFWDDMGE 386 + GK WP ++P ++ ++ + A+DQ + ++++ +S+ CD G+ Sbjct: 573 TENFAGK---WPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDA-----GD 624 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + + A L F ++VG K S + V ++ R + ++S+ E+I Sbjct: 625 TMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELI 673 >gi|288802831|ref|ZP_06408268.1| threonine--tRNA ligase [Prevotella melaninogenica D18] gi|288334648|gb|EFC73086.1| threonine--tRNA ligase [Prevotella melaninogenica D18] Length = 649 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 90/415 (21%), Positives = 150/415 (36%), Gaps = 65/415 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R E+ P + +L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTQLRLRLQELLRRLLRPYNYQEVITPGIGGKNLYVTSGHYAHYGKDAFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + +I+ +SY++LP + FR E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEIYAYKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + P+ K + L++F G + + I L Sbjct: 383 TFTQDDAHIF-VRPDQVKAEFENNIDIILKVFKTFGFDNYEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D E W AA + EK ++ E Sbjct: 428 RDPEDKEKYIGSD-----------------------EVWEESEAAIKEACAEKGLNARVE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 LGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMVHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ AV+ G +W PD VA IS + D +K+ A Sbjct: 525 GSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYAQKVKAYFDAHDV 576 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 DD E+IG + +L P VIVG K ++ V ++ + G + M++E Sbjct: 577 RSIMDDRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTME 631 >gi|85858497|ref|YP_460699.1| threonyl-tRNA synthetase [Syntrophus aciditrophicus SB] gi|85721588|gb|ABC76531.1| threonyl-tRNA synthetase [Syntrophus aciditrophicus SB] Length = 645 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 85/374 (22%), Positives = 153/374 (40%), Gaps = 55/374 (14%) Query: 58 REEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDI 117 ++E R G + P + DLW +SG +D Y +E + + ++ P + I Sbjct: 292 KKEHLRRGYDMVMGPQILKVDLWKKSGHFDHY-RENMYFTEVEGQSYGIKPMNCLSHMLI 350 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 +++ I+SYR+LP ++++ R E G++R+R+F DA+ TPE Sbjct: 351 YKTKIRSYRDLPIRYFELGTVHRHEKTGVLHGLLRARQFTQDDAHIL-CTPEQLNSEIRA 409 Query: 177 M--FVSY-LRIF---HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + FV Y ++IF + + L + P IG D E A Sbjct: 410 IADFVGYAMKIFGFEYEVELSTRP----DNSIGSDQDWELATSA---------------- 449 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 EN D+ ++ + I E A Y D KL D+L + + Sbjct: 450 ---LENALKDNQMTYD-INEGDGAFYGPKIDF---KLKDALKRKWQCAT----------I 492 Query: 291 GTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 ++LP T+ GADG+ H V + +GA+ V+ + G +W +AP Sbjct: 493 QCDFTLPERFDLTYVGADGEKHRPVMLHRVILGAIERFMGVLIEHYGGAFPVW---LAPV 549 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + L+++ + +Y +L G V D E++G + A P +++G Sbjct: 550 QAILLSVTDRHI---PYGKTVYQQLMDAGIRVEGDFRNEKLGYKIREAQTQKIPYMLVIG 606 Query: 408 SKFVSDSKVEIKHR 421 K ++ +V ++ R Sbjct: 607 DKEMASGEVAVRQR 620 >gi|332653846|ref|ZP_08419590.1| threonine--tRNA ligase [Ruminococcaceae bacterium D16] gi|332516932|gb|EGJ46537.1| threonine--tRNA ligase [Ruminococcaceae bacterium D16] Length = 589 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 91/394 (23%), Positives = 152/394 (38%), Gaps = 41/394 (10%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ G +LP G + + R+ + G +E+S P + + LW SG +D Y Sbjct: 205 MLRDEGPGFPFFLPKGMTLKNTLLDYWRQIHKKYGYVEISTPIILNRQLWERSGHWDHYK 264 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M + D D A+ P + ++ S SYR LP +I L R EL G Sbjct: 265 QNMYTTVIDGEDFAI--KPMNCPGGMLVYASEPHSYRELPLRVGEIGLVHRHELSGALHG 322 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 + R R F DA+ F +T E K + + ++ GL S + + P Sbjct: 323 LFRVRCFSQDDAHVF-MTREQMKDVIQETVRLFDEVYSTFGL-SYTIELSTMP------E 374 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + I + E ++D + I +F I E A Y D H L Sbjct: 375 DHIGTVEEWEH----NQDILKNAITDMGKEF-------VINEGDGAFYGPKLDFH---LA 420 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAA 327 DSL R + G I ++ + G DG+ H V + +G++ Sbjct: 421 DSL-------GRTWQCGTI-QLDSQLPERFELEYTGEDGQKHRPVMIHRVVLGSIERFIG 472 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 VI G W +AP ++ ++ + D K +L + G V D E+ Sbjct: 473 VITEHFAGAFPAW---LAPVQVKILPVTDRAAAYADQLSK---QLDEAGYRVETDHRNEK 526 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + A + P ++VG + + ++ V ++ R Sbjct: 527 IGKKIREATMEKIPYMIVVGDRDMENNTVSVRLR 560 >gi|333029961|ref|ZP_08458022.1| threonyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] gi|332740558|gb|EGJ71040.1| threonyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] Length = 647 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 95/428 (22%), Positives = 157/428 (36%), Gaps = 67/428 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + +++ Q G ++ P + + L+V SG Y YGK+ + Sbjct: 262 KGLPMWLPKGTALRLRLEDFLKKIQKEFGYEQVITPHIGNKLLYVTSGHYAKYGKDSFQP 321 Query: 97 ADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ Y P + +I++ +SYR LP + +R E G+ R R Sbjct: 322 IHTPEEGEEYLLKPMNCPHHCEIYKWTPRSYRELPLRLAEFGTVYRYEQSGELHGLTRVR 381 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K + + IF L ++ + I L Sbjct: 382 GFTQDDAHIF-CRPDQVKEEFLSVMDIIFIIFKALNFENFEAQ--------------ISL 426 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A + EK + E Sbjct: 427 RDPVNREKYIGSD-----------------------ENWEKAENAIVEACKEKGLKAKIE 463 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP + + GAD H V + Sbjct: 464 YGEAAFYGPKLDFMVRDALGRKWQLGTIQVDYNLPERFNLEYTGADNLKHRPVMIHRAPF 523 Query: 320 GAM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G+M R VA +IE + GK +W PD VA IS + D ++ L K Sbjct: 524 GSMERFVAVLIEHTA-GKFPLWLTPDQVAILPIS--------ERFNDYAHEVKKYLDKND 574 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DD E+IG + ++ P +IVG K + +V ++ + G + + LE+ Sbjct: 575 IRASVDDRNEKIGRKIRDNEVKRIPYMLIVGEKEAENREVSVRKQGEGDQGVIKLEDFAK 634 Query: 437 YASHRFSN 444 + N Sbjct: 635 KLNEEVQN 642 >gi|241761215|ref|ZP_04759303.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374122|gb|EER63619.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 659 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 97/428 (22%), Positives = 161/428 (37%), Gaps = 67/428 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q ++G W P G + A +R E+ P L A LW SG + + + Sbjct: 262 LQQEAQGSVFWHPNGYTIWLQLEAYLRRRMKNANYKEVKTPQLMDAALWEASGHWGKFRE 321 Query: 92 EMLRLADR-----NDKAMIYG--------PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 M + D DK ++ G P + IF+ I+SYR LP + Sbjct: 322 NMFVVPDEIPSTDPDKPVLSGKGNLMALKPMNCPAHIQIFKQGIRSYRELPLRMLEFGCC 381 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMR 196 R+E G+MR R+ DA+ F + + K FV+ L I+ LG S ++ Sbjct: 382 HRNEAHGALHGLMRVRQLTQDDAHIFCTAEQIVTET--KDFVNLLDSIYRDLGFTSYAVK 439 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 P +L L D E + + + + TD++++ + Y Sbjct: 440 LSLRP---ELRAGDDELWDNAENGLRSALEQVGI------TDYEELPGEGAF-------Y 483 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDH 310 + H L D+ +G + GT Y LP + A++ DG + Sbjct: 484 GPKLEFH---LTDA-------------IGRTWQCGTLQLDYVLPERLDASYVAEDGSRKR 527 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIY 369 V + IG ++ H G+ +W +AP + + I + D EK+ Sbjct: 528 PVMLHRAIIGTFERFIGILIEHHAGRFPLW---MAPVQAVVATIVSEADSFAESVVEKMK 584 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED- 428 A G V D E+I + L P ++VG + + KV I R G R+ Sbjct: 585 A----AGLRVVSDIRNEKINYKIREHSLTKVPNILVVGKREAEEGKVAI--RKLGSRDQI 638 Query: 429 -MSLEEVI 435 +S++E I Sbjct: 639 ILSVDEAI 646 >gi|188588550|ref|YP_001919768.1| threonyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] gi|238689641|sp|B2UYW3|SYT_CLOBA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|188498831|gb|ACD51967.1| threonyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] Length = 643 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 91/448 (20%), Positives = 167/448 (37%), Gaps = 55/448 (12%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L T +G+ +P G K + + + +E+ R Sbjct: 228 EYLEAIEEAKKRDHNKLGRELKLFT-TDENVGQGLPLLMPKGAKIVQTLQRWVEDEEERR 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHI 122 G + P + +DL+ SG +D Y M L D ++ P I+ + Sbjct: 287 GYVLTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDEEVFALRPMTCPFQYTIYNAEQ 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + + FR+E G++R R+F + D + +TPE + + + Sbjct: 347 HSYRDLPIRYGETSTLFRNESSGEMHGLIRVRQFTLADGHLI-VTPEQLEEEFKGVLELI 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + LG I D+S+ F D T+ + + P D Sbjct: 406 QYLMKTLG------------IDEDISYRFSKW-DPNNTEKYIND-------PEAWNKTQD 445 Query: 242 IISLNSIVEQWTAPYAATSD---VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 ++ +I++ Y D + KL + R + F + + Sbjct: 446 --TMRTILDHLKINYVEADDEAAFYGPKL--------DLQCRNVHGKEDTLFTVQIDFAL 495 Query: 299 SATF------KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 + F K + K Y+ S IG A++ + G W ++P ++ ++ Sbjct: 496 AERFDMSYIDKNGEKKRPYIIHRS-SIGCYERTLAMLIEKYAGAFPTW---LSPVQVKVL 551 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 I D E + L G + D E+IG + A L P ++VG K + Sbjct: 552 PISDK---YNDYAESVVKSLRNKGVRIEADYRAEKIGYKIREARLERTPYILVVGEKEAA 608 Query: 413 DSKVEIKHRLT----GIREDMSLEEVIN 436 +++V ++ R I+ D E ++N Sbjct: 609 NNEVSVRSRKNDDEGAIKLDAFTERLLN 636 >gi|241663242|ref|YP_002981602.1| threonyl-tRNA synthetase [Ralstonia pickettii 12D] gi|240865269|gb|ACS62930.1| threonyl-tRNA synthetase [Ralstonia pickettii 12D] Length = 635 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 83/401 (20%), Positives = 152/401 (37%), Gaps = 56/401 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I ++S G W P G + +R G E+ P + LW ++G +D Y + Sbjct: 255 IDEYSPGTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQILDKTLWEKTGHWDKYRE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + + P + I++ IKSYR+LP F + R+E G+M Sbjct: 315 NMF-ITESEKREYALKPMNCPGHILIYKQGIKSYRDLPLRFGEFGACHRNEPSGGLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGDL 206 R R F D + F E + F + L +++ G I + + P IG + Sbjct: 374 RVRGFTQDDGHIF--CTEDMIQAEVTAFTTLLQKVYKDFGFTEILYKLSTRPDKRIGTEE 431 Query: 207 SHEFIVLA-DTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDV 262 S + A G C +++ P E + I +++ QW T V Sbjct: 432 SWDRAEAALAEGLRASGCEFEYL----PGEGAFYGPKIEYVLKDALGRQWQ---CGTIQV 484 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGA 321 +LPE + A F G DG H + + +G+ Sbjct: 485 D-----PNLPER-----------------------LDAEFVGEDGARHRPIMLHRAIVGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVF 380 + ++ + G W ++P ++++++I +H + + + L K G Sbjct: 517 LERFIGILIEQYAGALPTW---LSPVQVAVLSITDSHAEYAQSVVQS----LQKQGFRAV 569 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + + P Q++VG K +++V ++ R Sbjct: 570 VDLRNEKIGYKIREHSVQKVPYQIVVGDKERDENQVAVRAR 610 >gi|325269899|ref|ZP_08136509.1| threonine--tRNA ligase [Prevotella multiformis DSM 16608] gi|324987872|gb|EGC19845.1| threonine--tRNA ligase [Prevotella multiformis DSM 16608] Length = 649 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 148/415 (35%), Gaps = 65/415 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R E+ P + +L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTQLRLRLQDLLRRLLRPYNYQEVITPGIGGKNLYVTSGHYAHYGKDSFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + +++ +SY++LP + FR E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + PE K + L++F G + + I L Sbjct: 383 TFTQDDAHIF-VRPEQVKTEFETNIDIILKVFKTFGFDNYEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D E W AA EK + E Sbjct: 428 RDPNDKEKYIGSD-----------------------EVWEESEAAIKQACEEKGLKARVE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 LGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ AV+ G +W PD VA IS + D K+ A L Sbjct: 525 GSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYAFKVKAYLDAHNV 576 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 DD E+IG + +L P VIVG K ++ V ++ + G + M++E Sbjct: 577 RSIMDDRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTME 631 >gi|256848462|ref|ZP_05553904.1| threonyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256714729|gb|EEU29708.1| threonyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 601 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 78/386 (20%), Positives = 152/386 (39%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I + + G + P L + D + SG ++ Y +M Sbjct: 217 GLPYWLPKGAAIRRTIERYIIDREVADGYEHVYTPVLMNLDAYKTSGHWEHYRDDMFPPM 276 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + +++ H++SYR+LP ++ + R E G+ R RE Sbjct: 277 DMGDGEMLELRPMNCPSHIQVYKHHLRSYRDLPLRIAELGMMHRYEKSGALSGLQRVREM 336 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R + L D Sbjct: 337 TLNDGHTF-VALDQIRSEFAKILKLIMSVYKDFDITDYSFR--------------LSLRD 381 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 + + + D M S D +SL+ E A Y D+ + +L + Sbjct: 382 PKNVKKYYANDEMWEKSQSMLKQAMDDLSLDYYEAEGEAAFYGPKLDIQTKT---ALGND 438 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M G +G M A + + Sbjct: 439 ETMSTIQLD----FMLPERFGL----TYVGKDGQEHMPVMIHRGVVGTMERFVAYLTEIY 490 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++ +I + D D +++ A L V D E++G + Sbjct: 491 KGAFPTW---LAPEQVHIIPVS--DDKHGDYADQLGAELRAAKIRVNVDHRNEKMGYKIR 545 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P ++VG +++ V ++ Sbjct: 546 EAQTQKVPYTLVVGDDEMANGSVSVR 571 >gi|56551661|ref|YP_162500.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|260752754|ref|YP_003225647.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|73919847|sp|Q5NPH1|SYT_ZYMMO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56543235|gb|AAV89389.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|258552117|gb|ACV75063.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 659 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 97/428 (22%), Positives = 161/428 (37%), Gaps = 67/428 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q ++G W P G + A +R E+ P L A LW SG + + + Sbjct: 262 LQQEAQGSVFWHPNGYTIWLQLEAYLRRRMKNANYKEVKTPQLMDAALWEASGHWGKFRE 321 Query: 92 EMLRLADR-----NDKAMIYG--------PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 M + D DK ++ G P + IF+ I+SYR LP + Sbjct: 322 NMFVVPDEIPSTDPDKPVLSGKGNLMALKPMNCPAHIQIFKQGIRSYRELPLRMLEFGCC 381 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMR 196 R+E G+MR R+ DA+ F + + K FV+ L I+ LG S ++ Sbjct: 382 HRNEAHGALHGLMRVRQLTQDDAHIFCTAEQIVTET--KDFVNLLDSIYRDLGFTSYAVK 439 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 P +L L D E + + + + TD++++ + Y Sbjct: 440 LSLRP---ELRAGDDELWDNAENGLRSALEQVGI------TDYEELPGEGAF-------Y 483 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDH 310 + H L D+ +G + GT Y LP + A++ DG + Sbjct: 484 GPKLEFH---LTDA-------------IGRTWQCGTLQLDYVLPERLDASYVAEDGSRKR 527 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIY 369 V + IG ++ H G+ +W +AP + + I + D EK+ Sbjct: 528 PVMLHRAIIGTFERFIGILIEHHAGRFPLW---MAPVQAVVATIVSEADSFAESVVEKMK 584 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED- 428 A G V D E+I + L P ++VG + + KV I R G R+ Sbjct: 585 A----AGLRVVSDIRNEKINYKIREHSLTKVPNILVVGKREAEEGKVAI--RKLGSRDQI 638 Query: 429 -MSLEEVI 435 +S++E I Sbjct: 639 ILSVDEAI 646 >gi|282916943|ref|ZP_06324701.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283770747|ref|ZP_06343639.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|282319430|gb|EFB49782.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283460894|gb|EFC07984.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] Length = 645 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 85/404 (21%), Positives = 168/404 (41%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ ++M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 QLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ + ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + + + D D +EN + L E+ A + ++ ++ + + Sbjct: 427 PEDKEKYFDDD--DMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEE 484 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSH 333 +S ++ F ++ L T+ G DG+ H + G+ + R VA + E + Sbjct: 485 TLSTAQLD----FLLPERFDL----TYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEET- 535 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 KG +P +AP ++ +I N+ H D ++ L G V DD E++G + Sbjct: 536 --KG-AFPTWLAPKQVQIIPVNVDLH----YDYARQLQDELKSQGVRVSIDDRNEKMGYK 588 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFI 632 >gi|270290442|ref|ZP_06196667.1| threonyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|304384676|ref|ZP_07367022.1| threonine--tRNA ligase [Pediococcus acidilactici DSM 20284] gi|270281223|gb|EFA27056.1| threonyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|304328870|gb|EFL96090.1| threonine--tRNA ligase [Pediococcus acidilactici DSM 20284] Length = 647 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 79/386 (20%), Positives = 156/386 (40%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ + G + P L + D + SG + Y ++M Sbjct: 263 GLPYWMPNGATIRRTIERYIIDKEVQHGYQHVYTPVLMNLDAYKTSGHWQHYREDMFPPM 322 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + +++ HI+SYR LP ++ + R E G+ R RE Sbjct: 323 DMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 382 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ + + K+ + ++ + R LS+ D Sbjct: 383 TLNDGHTF-VAPDQIQEEFKKVLQLMVEVYRDFDITDYTFR---------LSYR-----D 427 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S D + L+ + E A Y DV + +L Sbjct: 428 PENTEKYFDDDEMWNHSQSMLKAAMDDLGLDYVEAEGEAAFYGPKLDVQTKT---ALGNE 484 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F ++ L + GADG++H M G + M A + + Sbjct: 485 ETLSTIQLD----FMLPKQFDL----HYVGADGEEHRPVMIHRGLVSTMERFTAYLIEMY 536 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++++I +K D + + +K+ +++ V D E++G + Sbjct: 537 KGAFPTW---LAPKQVTIIPVK--DDLHGEYADKLREQMADQDIRVEVDHRNEKMGYKIR 591 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P ++VG + + V ++ Sbjct: 592 EAQTQKIPYILVVGDNEMDSNAVSVR 617 >gi|124008543|ref|ZP_01693235.1| prolyl-tRNA synthetase [Microscilla marina ATCC 23134] gi|123985917|gb|EAY25774.1| prolyl-tRNA synthetase [Microscilla marina ATCC 23134] Length = 498 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 62/325 (19%), Positives = 133/325 (40%), Gaps = 65/325 (20%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E V+ ++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 115 EEELIVRPTSETVIWSSYKKWIQSYRDLPILLNQWANVVRWEMRTRI-FLRTSEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 + T +K + + ++ Sbjct: 174 H----TAHATKEEAEAETIQMMNVYAEF-------------------------------- 197 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 +++FM P+ I + S E+ +A + + ++L ++ + Sbjct: 198 ---AENFMAVPV---------IKGIKSESER----FAGADETY---CIEALMQD----GK 234 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G ++ F + K+ V S+G+ + R++ A+I + D G++ Sbjct: 235 ALQAGTSHFLGQNFAKAFDVKFLNKENKEELVWGTSWGV-STRLMGALIMAHSDDHGLVL 293 Query: 341 PDSVAPFKISLINIKAHDQ---VCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVAD 396 P +AP ++ ++ I D+ +I L VG V +D+ + G +FA + Sbjct: 294 PPKLAPIQVVIVPIYKGDEQFAAVSAKANEIKKALEAVGVSVKYDNRDTYKPGFKFADWE 353 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 + G P+++ +G++ + + VE+ R Sbjct: 354 MKGVPVRLALGARDLENGTVEMARR 378 >gi|300856979|ref|YP_003781963.1| prolyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] gi|300437094|gb|ADK16861.1| prolyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] Length = 476 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 72/146 (49%), Gaps = 2/146 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G ++ + +GK YV S+G+ R++ A+I D G+ Sbjct: 223 GKALQAGTSHYLGQNFAKSFGMQYSDKEGKLQYVYQTSWGV-TTRLLGAIIMVHGDDNGL 281 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ ++ I H + D ++ R++K V DD + G +F+ ++ Sbjct: 282 VVPPRIAPTQVIIVPIAQHKEGVLDKANELKDRIAKFA-RVKLDDSDKMAGWKFSEYEMK 340 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G P+++ VG K + ++V + R +G Sbjct: 341 GVPIRLEVGPKDIEKNQVVLVRRDSG 366 >gi|88195489|ref|YP_500293.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|123003455|sp|Q2FXP7|SYT_STAA8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|87203047|gb|ABD30857.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|329728437|gb|EGG64874.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189] Length = 645 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 85/404 (21%), Positives = 168/404 (41%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ ++M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 QLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ + ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + + + D D +EN + L E+ A + ++ ++ + + Sbjct: 427 PEDKEKYFDDD--DMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEE 484 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSH 333 +S ++ F ++ L T+ G DG+ H + G+ + R VA + E + Sbjct: 485 TLSTAQLD----FLLPERFDL----TYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEET- 535 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 KG +P +AP ++ +I N+ H D ++ L G V DD E++G + Sbjct: 536 --KG-AFPTWLAPKQVQIIPVNVDLH----YDYARQLQDELKSQGVRVSIDDRNEKMGYK 588 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFI 632 >gi|78066086|ref|YP_368855.1| threonyl-tRNA synthetase [Burkholderia sp. 383] gi|123756187|sp|Q39H55|SYT_BURS3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77966831|gb|ABB08211.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia sp. 383] Length = 635 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 84/396 (21%), Positives = 151/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +V F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGHVQV----FKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHS--YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ DA+ F + S +N + +S ++ G I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMS---VYKDFGFDHIDIKLSLRPEQRA 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + E A+ G + +P E A Y + H Sbjct: 428 GTDETWDRAEQGLRDALTACGLTWEELPGEG-----------------AFYGPKIEYH-- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 + D+L + + +++ G +Y S+ + V + +G+M Sbjct: 469 -IKDALGRSWQCGTLQLDMVLPERLGAEYVADDSS-------RRRPVMLHRAIVGSMERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H G W +APF+ ++NI A Q + + + L K G V D Sbjct: 521 LGILIEHHAGAMPAW---LAPFQAVVLNI-AESQA--EYAQSLAQSLQKQGVRVTADLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P ++VG K V ++ R Sbjct: 575 EKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRAR 610 >gi|225386498|ref|ZP_03756262.1| hypothetical protein CLOSTASPAR_00245 [Clostridium asparagiforme DSM 15981] gi|225047417|gb|EEG57663.1| hypothetical protein CLOSTASPAR_00245 [Clostridium asparagiforme DSM 15981] Length = 499 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 1/160 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ F D YV S+G+ R++ A+I D G+ Sbjct: 245 GKALQSGTSHNFGDGFAKAFEIQFTDKDNTLKYVHQTSWGM-TTRMIGAIIMVHGDDNGL 303 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP +I ++ ++ D ++ RL++ G V DD + G +FA ++ Sbjct: 304 VLPPRIAPIQIMVVPVQQQKPGVLDKAFELKERLTRAGFSVKVDDSEKSPGWKFADCEMR 363 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 G PL+V +G K + ++ + R + +SL+E+ + A Sbjct: 364 GIPLRVEIGPKDMEKNQAVLVRRDNHEKTFISLDELESKA 403 >gi|15924673|ref|NP_372207.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|15927261|ref|NP_374794.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|156980000|ref|YP_001442259.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|255006467|ref|ZP_05145068.2| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|54039693|sp|P67585|SYT_STAAN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|54042050|sp|P67584|SYT_STAAM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225504|sp|A7X3A6|SYT_STAA1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|13701479|dbj|BAB42773.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus N315] gi|14247455|dbj|BAB57845.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus Mu50] gi|156722135|dbj|BAF78552.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus Mu3] Length = 645 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 85/404 (21%), Positives = 168/404 (41%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ ++M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 QLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ + ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + + + D D +EN + L E+ A + ++ ++ + + Sbjct: 427 PEDKEKYFDDD--DMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEE 484 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSH 333 +S ++ F ++ L T+ G DG+ H + G+ + R VA + E + Sbjct: 485 TLSTAQLD----FLLPERFDL----TYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEET- 535 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 KG +P +AP ++ +I N+ H D ++ L G V DD E++G + Sbjct: 536 --KG-AFPTWLAPKQVQIIPVNVDLH----YDYARQLQDELKSQGVRVSIDDRNEKMGYK 588 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFI 632 >gi|116512847|ref|YP_811754.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] gi|122939966|sp|Q02WN1|SYT_LACLS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116108501|gb|ABJ73641.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] Length = 646 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 86/412 (20%), Positives = 168/412 (40%), Gaps = 37/412 (8%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G WLP G + + +++ + G + P + + + + +SG + Y ++M Sbjct: 262 GTAYWLPAGATIRRIIERFVVDQEVKNGYQHVITPVMMNLNTYKQSGHWQHYHEDMYPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D + M P + I++ H+ SYR LP + + R E G+ R RE Sbjct: 322 DMGDGEEMELRPMNCPSHIAIYKHHVHSYRELPIRIAEFGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + E + ++K+ + ++ G+ R LS+ D Sbjct: 382 TLNDGHTF-VMLEQVQEEFSKILQLIMDMYRDFGINDYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 +T + D M + D + L+ + E A Y D+ ++ +L Sbjct: 427 PKDTVKYFPDDEMWEKSQAMLKATMDDMKLDYVEAEGEAAFYGPKLDI---QVKTALGNE 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ + F Y GADG+ H M G+ + R +A +IE Sbjct: 484 ETLSTIQLDFLNPENFDISYV--------GADGEKHRPVMIHRGVISTLERFIAYLIEVY 535 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 KG +P +AP + ++I + ++++ D KI L G V D+ E++G + Sbjct: 536 ---KG-AFPTWLAPTQATIIPV--NNEIHADYAWKIQRELQDKGFRVVVDEANEKMGWKI 589 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + P Q+++G + ++ V I+ + E + E+ I S +N Sbjct: 590 RQSQTHKIPYQIVIGDQEQANGTVNIRRYGSKETEVIPFEDFIEKISADVAN 641 >gi|315659856|ref|ZP_07912715.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590] gi|315495144|gb|EFU83480.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 638 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 11/155 (7%) Query: 16 RDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 R+AE +H+ + L+ M + + G+ +L GQ + + +RE Q + E+ P Sbjct: 237 REAEARNHRKLGKQLKLFMFSEEAPGMPFYLSNGQFVRNQMENFLREIQLKNDYDEVRTP 296 Query: 73 TLQSADLWVESGRYDSYGKEM-LRLADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLP 129 + + LW ESG +D Y + M D ND A+ + P H IF++ ++SY++LP Sbjct: 297 LMMNQKLWEESGHWDHYHENMYFTKVDENDYALKPMNCPGH----MLIFKNELRSYKDLP 352 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + R E G++R R F DA+ F Sbjct: 353 LRMAEFGQVHRHEFSGALNGLLRVRTFCQDDAHIF 387 >gi|50302871|ref|XP_451373.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640504|emb|CAH02961.1| KLLA0A08448p [Kluyveromyces lactis] Length = 672 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 71/345 (20%), Positives = 136/345 (39%), Gaps = 70/345 (20%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ + PT E VM + I+SYR+LP Q R E + +R+REFL ++ Sbjct: 268 DEPIAIRPTSETVMYPYYAKWIQSYRDLPIKLNQWNSVVRWEFKHPQPFLRTREFLWQEG 327 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ LT E ++ ++ Y ++ L ++P +V E + Sbjct: 328 HTAHLTKEAAEEEVMQILDFYAGVYEE--LLAVP----------------VVKGRKTEKE 369 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F DF T + + +P+ + R Sbjct: 370 KFAGGDF-----------------------------TTTCEGY-------IPQ----TGR 389 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKG 337 GI+ + G +S + + + G +H + S+G+ + RV+ ++ D KG Sbjct: 390 GIQGATSHHLGQNFSKMFNISVENPLGSEHPKIFAYQNSWGL-STRVIGVMVMIHSDNKG 448 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIY-------ARLSKVGCDVFWD-DMGEQIG 389 ++ P V+ F+ ++ + + + KI+ +RL K G F D + G Sbjct: 449 LVIPPRVSQFQSVVLPVGITTKTSDEQRAKIHENARAIESRLKKAGIRAFGDYNDNYTPG 508 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +F+ +L G PL++ +G K + +V R G + +SL ++ Sbjct: 509 WKFSQYELKGIPLRIELGPKDLEKEQVTCVRRNDGKKIVVSLNDL 553 >gi|291563461|emb|CBL42277.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [butyrate-producing bacterium SS3/4] Length = 646 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 96/427 (22%), Positives = 163/427 (38%), Gaps = 51/427 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ G +LP G + + RE + G +E+S P + + LW SG +D Y Sbjct: 254 MMSDAGPGFPFFLPKGMVLKNTLLDYWREIHKKAGYVEISTPIILNRSLWETSGHWDHYK 313 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M + D D A+ P + ++ S +SYR+LP ++ + R E + G Sbjct: 314 NNMYTTIIDGEDYAI--KPMNCPGGVLVYASEPRSYRDLPLRMGELGIVHRHEKSGQLHG 371 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 +MR R F DA+ F +TPE + + +++ G K Sbjct: 372 LMRVRCFTQDDAHIF-MTPEQIRDEIKNVAGLINQVYSLFGFKY---------------- 414 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + L+ E + +D+ + S DD+ I E A Y D H L Sbjct: 415 -HVELSTRPEDSMGSDEDW-ELATSSLQGALDDLGLDYVINEGDGAFYGPKIDFH---LV 469 Query: 269 DSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-R 323 D++ R + G I F ++ L + GADG+ H + + G++ R Sbjct: 470 DAI-------GRTWQCGTIQLDFQLPQRFEL----EYIGADGEKHRPIMIHRVCFGSIER 518 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE +P +AP ++ ++ I + + + + A L D Sbjct: 519 FIGILIEHFAGA----FPTWLAPVQVKVLPIS---EKYEEYAKSVKAALDAADIRAEIDL 571 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E+IG + A P ++VG K +D V ++ R G L I + Sbjct: 572 RSEKIGYKIREAQGQKIPYMLVVGQKEQADGTVSVRSRFKGDEGAEDLNVFIANIKAEIA 631 Query: 444 N--NRPV 448 NRPV Sbjct: 632 GRVNRPV 638 >gi|229823364|ref|ZP_04449433.1| hypothetical protein GCWU000282_00662 [Catonella morbi ATCC 51271] gi|229787139|gb|EEP23253.1| hypothetical protein GCWU000282_00662 [Catonella morbi ATCC 51271] Length = 479 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 3/145 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GTK++ + D + Y S+G+ + R++ A+I + D KG+ Sbjct: 215 GKAVQAGTSHYMGTKFAEAFDIRYLNTDNEHVYAHTSSFGV-STRLIGAMIMTHGDDKGL 273 Query: 339 IWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P +VAP ++ + + + D ++ A+L G DD G +F + Sbjct: 274 VLPPAVAPTQVVFVPVGPWQKNPAILDKIHELQAQLKAAGIRCRVDDSNNSPGFKFNEWE 333 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L G P+++ G + + +++V +K R Sbjct: 334 LRGVPVRIECGPRDLENAQVMMKAR 358 >gi|329113775|ref|ZP_08242547.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001] gi|326696901|gb|EGE48570.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001] Length = 640 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 6/174 (3%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G W P G + A +R Q +E++ P + LW SG ++ +G+ M Sbjct: 258 APGAVFWHPNGWTLFQTLLAYLRARQQAENYVEINTPDIMDLSLWQASGHWEKFGENMF- 316 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + P + +FR +KSYR+LP + R E G+MR R Sbjct: 317 TTETEGRTYALKPMNCPGGVQVFRHGLKSYRDLPLRMAEFGKVHRFEPSGALHGLMRVRA 376 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 F DA+ F TPE + ++ L I+ G ++ ++ P +G D Sbjct: 377 FTQDDAHIF-CTPEQMEAETQRICHLVLSIYKDFGFNNVRIKFSDRPEKRVGSD 429 >gi|301300332|ref|ZP_07206537.1| threonine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852068|gb|EFK79747.1| threonine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 649 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 82/386 (21%), Positives = 153/386 (39%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + L+ +SG +D Y ++M Sbjct: 265 GLPYWMPNGATIRRVIERYIIDKEVAWGFQHVYTPVLANLSLYKQSGHWDHYREDMFPPM 324 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + ++ H +SYR LP ++ + R E G+ R RE Sbjct: 325 DMGDGEMLELRPMNCPSHIQVYNHHKRSYRELPLRIAELGMMHRYEKSGALTGLSRVREM 384 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D + F + P+ + + +++ + R LS+ D Sbjct: 385 TLNDGHDF-IEPDHIEDEIKTLIKLMTEVYNDFDITDYRFR---------LSYR-----D 429 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S+ D + L E A Y DV + +L Sbjct: 430 PKNTEKYFDDDEMWEKSQSKLKAAMDDMGLEYFEAEGEAAFYGPKIDVQTKT---ALGGE 486 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L + GADG++H M GI M A + + Sbjct: 487 ETLSTIQLD----FLLPERFDL----KYIGADGEEHRPVMVHRGIVSTMERFTAYLTEMY 538 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++ +I +K + + D + ++L G V DD E++G + Sbjct: 539 KGAFPTW---LAPHQVDIIPVK--NDLHMDYVNDLSSKLRAHGIRVTVDDRNEKMGYKIR 593 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A + P +++G + VS+ V ++ Sbjct: 594 QAQVNKIPYTLVIGDEEVSNGTVTVR 619 >gi|50121350|ref|YP_050517.1| threonyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] gi|73919790|sp|Q6D4G8|SYT_ERWCT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|49611876|emb|CAG75325.1| threonyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] Length = 642 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 86/409 (21%), Positives = 148/409 (36%), Gaps = 42/409 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + +W ++G +D+Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGPFMMDRVMWEKTGHWDNYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + N ++ G + I ++ + P S E Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 433 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ + P E + I L D Sbjct: 434 WDRAEADLAAALTENNIEFAYQPGEGAFYGPKIEFT--------------------LHDC 473 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 L R + G + +SLP +SA++ G + M I G+M Sbjct: 474 LD-------RAWQCGTV---QLDFSLPGRLSASYVGESNERQVPVMIHRAILGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ G +P +AP ++ +INI D ++ +L + G V D E+ Sbjct: 524 ILTEEFAG---FFPTWLAPVQVVIINITDSQS---DYVNELTQKLQEAGIRVKADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 IG + L P ++ G K V KV ++ R + + EVI+ Sbjct: 578 IGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVIS 626 >gi|21283355|ref|NP_646443.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|49483925|ref|YP_041149.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|49486509|ref|YP_043730.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|57650554|ref|YP_186567.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87161367|ref|YP_494324.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|148268163|ref|YP_001247106.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150394230|ref|YP_001316905.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|151221788|ref|YP_001332610.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509896|ref|YP_001575555.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142567|ref|ZP_03567060.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317174|ref|ZP_04840387.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732334|ref|ZP_04866499.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734533|ref|ZP_04868698.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|257425798|ref|ZP_05602222.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428464|ref|ZP_05604862.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257431098|ref|ZP_05607475.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus 68-397] gi|257433781|ref|ZP_05610139.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus E1410] gi|257436697|ref|ZP_05612741.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|257794068|ref|ZP_05643047.1| threonyl-tRNA synthetase [Staphylococcus aureus A9781] gi|258415772|ref|ZP_05682043.1| threonyl-tRNA synthetase [Staphylococcus aureus A9763] gi|258421991|ref|ZP_05684911.1| threonyl-tRNA synthetase [Staphylococcus aureus A9719] gi|258424099|ref|ZP_05686981.1| threonyl-tRNA synthetase [Staphylococcus aureus A9635] gi|258438251|ref|ZP_05689535.1| threonyl-tRNA synthetase [Staphylococcus aureus A9299] gi|258443709|ref|ZP_05692048.1| threonyl-tRNA synthetase [Staphylococcus aureus A8115] gi|258445920|ref|ZP_05694096.1| threonyl-tRNA synthetase [Staphylococcus aureus A6300] gi|258448399|ref|ZP_05696516.1| threonyl-tRNA synthetase [Staphylococcus aureus A6224] gi|258451803|ref|ZP_05699825.1| threonyl-tRNA synthetase [Staphylococcus aureus A5948] gi|258454120|ref|ZP_05702091.1| threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase [Staphylococcus aureus A5937] gi|269203301|ref|YP_003282570.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282893178|ref|ZP_06301412.1| threonyl-tRNA synthetase [Staphylococcus aureus A8117] gi|282904254|ref|ZP_06312142.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282908994|ref|ZP_06316812.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911310|ref|ZP_06319112.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914479|ref|ZP_06322265.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282919448|ref|ZP_06327183.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282920223|ref|ZP_06327948.1| threonyl-tRNA synthetase [Staphylococcus aureus A9765] gi|282924825|ref|ZP_06332491.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282927813|ref|ZP_06335424.1| threonyl-tRNA synthetase [Staphylococcus aureus A10102] gi|283958434|ref|ZP_06375885.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|284024731|ref|ZP_06379129.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132] gi|293503557|ref|ZP_06667404.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|293510572|ref|ZP_06669277.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|293537114|ref|ZP_06671794.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|294848704|ref|ZP_06789450.1| threonyl-tRNA synthetase [Staphylococcus aureus A9754] gi|295405993|ref|ZP_06815801.1| threonyl-tRNA synthetase [Staphylococcus aureus A8819] gi|295428254|ref|ZP_06820883.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|296274890|ref|ZP_06857397.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1] gi|297207604|ref|ZP_06924039.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245081|ref|ZP_06928958.1| threonyl-tRNA synthetase [Staphylococcus aureus A8796] gi|297590783|ref|ZP_06949421.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|300911686|ref|ZP_07129130.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|304380726|ref|ZP_07363395.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|38258392|sp|Q8NW68|SYT_STAAW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56749381|sp|Q6G8P3|SYT_STAAS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56749410|sp|Q6GG23|SYT_STAAR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71153575|sp|Q5HF90|SYT_STAAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123735974|sp|Q2FG54|SYT_STAA3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|172048941|sp|A6QHL6|SYT_STAAE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083625|sp|A6U2F0|SYT_STAA2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083626|sp|A5ITK7|SYT_STAA9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083627|sp|A8Z2J8|SYT_STAAT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|38492559|pdb|1NYQ|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With An Analogue Of Threonyl Adenylate gi|38492560|pdb|1NYQ|B Chain B, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With An Analogue Of Threonyl Adenylate gi|38492561|pdb|1NYR|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With Atp gi|38492562|pdb|1NYR|B Chain B, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With Atp gi|21204795|dbj|BAB95491.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus MW2] gi|49242054|emb|CAG40753.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|49244952|emb|CAG43413.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|57284740|gb|AAW36834.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87127341|gb|ABD21855.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|147741232|gb|ABQ49530.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Staphylococcus aureus subsp. aureus JH9] gi|149946682|gb|ABR52618.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|150374588|dbj|BAF67848.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368705|gb|ABX29676.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723934|gb|EES92663.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727474|gb|EES96203.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|257271492|gb|EEV03638.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275305|gb|EEV06792.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278046|gb|EEV08694.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus 68-397] gi|257281874|gb|EEV12011.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus E1410] gi|257284048|gb|EEV14171.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|257788040|gb|EEV26380.1| threonyl-tRNA synthetase [Staphylococcus aureus A9781] gi|257839365|gb|EEV63838.1| threonyl-tRNA synthetase [Staphylococcus aureus A9763] gi|257842035|gb|EEV66464.1| threonyl-tRNA synthetase [Staphylococcus aureus A9719] gi|257845720|gb|EEV69752.1| threonyl-tRNA synthetase [Staphylococcus aureus A9635] gi|257848295|gb|EEV72286.1| threonyl-tRNA synthetase [Staphylococcus aureus A9299] gi|257851115|gb|EEV75058.1| threonyl-tRNA synthetase [Staphylococcus aureus A8115] gi|257855162|gb|EEV78101.1| threonyl-tRNA synthetase [Staphylococcus aureus A6300] gi|257858367|gb|EEV81252.1| threonyl-tRNA synthetase [Staphylococcus aureus A6224] gi|257860515|gb|EEV83341.1| threonyl-tRNA synthetase [Staphylococcus aureus A5948] gi|257863572|gb|EEV86329.1| threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase [Staphylococcus aureus A5937] gi|262075591|gb|ACY11564.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|269941163|emb|CBI49550.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20] gi|282313191|gb|EFB43587.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282317258|gb|EFB47632.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282321660|gb|EFB51985.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282325005|gb|EFB55315.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327258|gb|EFB57553.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282590323|gb|EFB95402.1| threonyl-tRNA synthetase [Staphylococcus aureus A10102] gi|282594571|gb|EFB99556.1| threonyl-tRNA synthetase [Staphylococcus aureus A9765] gi|282595872|gb|EFC00836.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282764496|gb|EFC04622.1| threonyl-tRNA synthetase [Staphylococcus aureus A8117] gi|283790583|gb|EFC29400.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|285817366|gb|ADC37853.1| Threonyl-tRNA synthetase [Staphylococcus aureus 04-02981] gi|290919959|gb|EFD97027.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|291095223|gb|EFE25488.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|291466463|gb|EFF08984.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|294824730|gb|EFG41153.1| threonyl-tRNA synthetase [Staphylococcus aureus A9754] gi|294968990|gb|EFG45011.1| threonyl-tRNA synthetase [Staphylococcus aureus A8819] gi|295127654|gb|EFG57291.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|296887621|gb|EFH26519.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178161|gb|EFH37409.1| threonyl-tRNA synthetase [Staphylococcus aureus A8796] gi|297575669|gb|EFH94385.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|300887107|gb|EFK82308.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|302333348|gb|ADL23541.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus JKD6159] gi|302751509|gb|ADL65686.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340725|gb|EFM06656.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312437859|gb|ADQ76930.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60] gi|312830061|emb|CBX34903.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130684|gb|EFT86670.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS03] gi|315195587|gb|EFU25974.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS00] gi|315198621|gb|EFU28949.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS01] gi|320140439|gb|EFW32293.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143977|gb|EFW35746.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314355|gb|AEB88768.1| Threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131] gi|329727674|gb|EGG64130.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172] Length = 645 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 85/404 (21%), Positives = 168/404 (41%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ ++M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 QLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ + ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + + + D D +EN + L E+ A + ++ ++ + + Sbjct: 427 PEDKEKYFDDD--DMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEE 484 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSH 333 +S ++ F ++ L T+ G DG+ H + G+ + R VA + E + Sbjct: 485 TLSTAQLD----FLLPERFDL----TYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEET- 535 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 KG +P +AP ++ +I N+ H D ++ L G V DD E++G + Sbjct: 536 --KG-AFPTWLAPKQVQIIPVNVDLH----YDYARQLQDELKSQGVRVSIDDRNEKMGYK 588 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFI 632 >gi|225181661|ref|ZP_03735101.1| threonyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] gi|225167642|gb|EEG76453.1| threonyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] Length = 636 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 90/409 (22%), Positives = 157/409 (38%), Gaps = 47/409 (11%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA 103 P G + + REE + G E+ P + + LW SG +D Y +E + +++ Sbjct: 268 PRGMIIRNALEEFWREEHRKAGYDEIKTPIILNRVLWERSGHWDHY-QENMYFTKIDEQD 326 Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYS 162 P + ++++ + SYR+LP ++ L R EL G+MR R F DA+ Sbjct: 327 FSVKPMNCPGSMLVYKTKMHSYRDLPVRMGELGLVHRHELSGTLHGMMRVRAFTQDDAHI 386 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 F + P K K+ R+++ G + + P S E +A +V Sbjct: 387 F-MLPSQIKEEVAKVIELTDRVYNVFGF-DYHVELSTKPEKAMGSDEMWDVATNALREVL 444 Query: 223 CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + M F I + F Y D H L DS+ R Sbjct: 445 EERG-MQFVINEGDGAF----------------YGPKIDFH---LQDSI-------GRTW 477 Query: 283 EVGHI---FYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGI 338 + G I F K+ + + G DG+ H + I G++ AV+ G Sbjct: 478 QCGTIQLDFQMPEKFDI----HYVGEDGQKHRPAVIHRVIYGSIERFMAVLIEHFAGAFP 533 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 +W +AP ++ ++ I H Q + E R + G D E+IG + A + Sbjct: 534 VW---LAPQQVVVLPITDKHHQYAQTLVE----RFREAGVRAEADVRNEKIGYKIREAQV 586 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 P ++VG K + +V ++ R G M ++ + + +N + Sbjct: 587 QKVPYMLVVGDKEMEAGQVSVRERAAGDVGSMEVDAFLAKITAEIANKQ 635 >gi|289549510|ref|YP_003470414.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|289179042|gb|ADC86287.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] Length = 638 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 11/155 (7%) Query: 16 RDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 R+AE +H+ + L+ M + + G+ +L GQ + + +RE Q + E+ P Sbjct: 237 REAEARNHRKLGKQLKLFMFSEEAPGMPFYLSNGQFVRNQMENFLREIQLKNDYDEVRTP 296 Query: 73 TLQSADLWVESGRYDSYGKEM-LRLADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLP 129 + + LW ESG +D Y + M D ND A+ + P H IF++ ++SY++LP Sbjct: 297 LMMNQKLWEESGHWDHYHENMYFTKVDENDYALKPMNCPGH----MLIFKNELRSYKDLP 352 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + R E G++R R F DA+ F Sbjct: 353 LRMAEFGQVHRHEFSGALNGLLRVRTFCQDDAHIF 387 >gi|282906079|ref|ZP_06313934.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282331371|gb|EFB60885.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] Length = 645 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 85/404 (21%), Positives = 168/404 (41%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ ++M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 QLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ + ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + + + D D +EN + L E+ A + ++ ++ + + Sbjct: 427 PEDKEKYFDDD--DMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEE 484 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSH 333 +S ++ F ++ L T+ G DG+ H + G+ + R VA + E + Sbjct: 485 TLSTAQLD----FLLPERFDL----TYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEET- 535 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 KG +P +AP ++ +I N+ H D ++ L G V DD E++G + Sbjct: 536 --KG-AFPTWLAPKQVQIIPVNVDLH----YDYARQLQDELKSQGVRVSIDDRNEKMGYK 588 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFI 632 >gi|268608298|ref|ZP_06142025.1| threonyl-tRNA synthetase [Ruminococcus flavefaciens FD-1] Length = 646 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 6/181 (3%) Query: 16 RDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 +A++ HK + + M + G+ WLP G K + + R G E+S P Sbjct: 237 EEAKLRDHKKLGKEQALFMFDHTAPGMPYWLPRGWKLFNALLEYWRGVHEDHGYTEISGP 296 Query: 73 TLQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 L +LWV SG +D Y M + A+ +++ P + ++ + +SY+ LP Sbjct: 297 VLSKKELWVTSGHWDHYQDGMFVIPAEEDNEVYCAKPMNCPNAIKVYMNRQRSYKELPLK 356 Query: 132 FYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F Q+ + R E G+ R ++F DA+ +T E N + I++ GL Sbjct: 357 FNQVDVIHRKEKSGELNGLFRVQQFRQDDAHIL-VTEEQIASEINDIMDIATEIYNTFGL 415 Query: 191 K 191 + Sbjct: 416 E 416 >gi|154148459|ref|YP_001406198.1| threonyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] gi|171769701|sp|A7I107|SYT_CAMHC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|153804468|gb|ABS51475.1| threonyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] Length = 609 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 4/159 (2%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L IL+E RD I +++ L T Q G+ WLP G + + I+ R G Sbjct: 204 YLRILEEAKKRDHRIIGNEMKLFT-FDDQIGAGLPVWLPNGARMRSKLEKILFGVHRRRG 262 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + AD W SG Y +Y KE + +++ P + +++S I+SY Sbjct: 263 YEPVRGPEILKADAWKISGHYTNY-KENMYFTKIDEQEYGIKPMNCVGHIKVYQSEIRSY 321 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 R+LP F++ + R E G+ R REF DA+ F Sbjct: 322 RDLPLKFFEYGVVHRHEKSGVMHGLFRVREFTQDDAHIF 360 >gi|225374732|ref|ZP_03751953.1| hypothetical protein ROSEINA2194_00352 [Roseburia inulinivorans DSM 16841] gi|225213424|gb|EEG95778.1| hypothetical protein ROSEINA2194_00352 [Roseburia inulinivorans DSM 16841] Length = 594 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 84/403 (20%), Positives = 152/403 (37%), Gaps = 58/403 (14%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +LP G + I+ ++ + G + + P + + +L+ SG +D Y M Sbjct: 204 RGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMTPCVGTVNLYKTSGHWDHYKDNMFPA 263 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P + I+ + + SY++LP +I FR E G+ R R F Sbjct: 264 MEVEGESFVLRPMNCPHHMMIYANRMHSYKDLPIRIGEIAHDFRFEASGTLKGIERGRHF 323 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 DA+ F +TPE + ++++ DL F D Sbjct: 324 CQNDAHLF-VTPEQIESEFSQVV--------------------------DLI--FDTYKD 354 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 T C D P++ + D E W A V ++ D E Sbjct: 355 FNITDYRCVLSLRD---PADKVKYHDDD------EMWNTAENALRKVLDDLGIDYTEEIG 405 Query: 276 RVSARG--IEVGHIFYFGTKYSL-----------PMSATFKGADG-KDHYVQMGSYGIGA 321 + G ++V G +Y+L + T+ DG K V + +G+ Sbjct: 406 EAAFYGPKLDVNVKPAIGNEYTLSTCQLDFCLPEKFNLTYIDKDGTKKTPVVLHRAILGS 465 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + A I G +W +AP + +I +K D+ ++ + L + G V Sbjct: 466 LDRFMAYILEETKGNLPLW---LAPVQARIIPVKNEDEELNAYSHELLSYLDENGIRVEI 522 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 D+ E++G + A + P +I+G V D V +RL G Sbjct: 523 DERAEKLGYRVRAAQVEKVPYLIILGKNEVKDGTV--SYRLHG 563 >gi|328866339|gb|EGG14724.1| threonyl-tRNA synthetase [Dictyostelium fasciculatum] Length = 706 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 4/133 (3%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H +S G +LP G + + + IR E +R G E+ PT+ S LW +SG + Y + Sbjct: 327 HPYSPGCTFFLPHGTRIYNKLVEFIRFEYHRRGFSEVITPTMFSQSLWEQSGHWAKYSEN 386 Query: 93 MLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + D ++ +M P + +F S +SYR LP F + R+E+ G+ Sbjct: 387 MFPVKCDNSNYSM--KPMNCPGHCLMFASRSRSYRELPIRFADFGVLHRNEMAGALTGLT 444 Query: 151 RSREFLMKDAYSF 163 R R+F DA+ F Sbjct: 445 RVRKFQQDDAHIF 457 >gi|301320495|gb|ADK69138.1| proline--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 474 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 79/392 (20%), Positives = 157/392 (40%), Gaps = 73/392 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG + P G + + + + EE + + P L L+ E + + E+ Sbjct: 35 KGTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIEGFSPEIAT 94 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + + ++ + PT E VM D F + I SYR+LP + Q +++ RP Sbjct: 95 VTRVGQKKLEENLFIRPTSEVVMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTTRP---F 151 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ SYN+ L+I + I + E Sbjct: 152 LRTSEFLWQEGHTV-------HSSYNEAENFCLKILN---------------IYEKFAKE 189 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 ++L V C K +E F A D + Sbjct: 190 ILLLP------VICGK-------KTEKEKF-----------------AGAKDTYT----- 214 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 E+ + ++ G +F ++ F+ + K + S+G+ + R++ A+I Sbjct: 215 --IESLMFDGQALQCGTSHFFADNFTKVYDIKFQNKENKLEHAYSTSWGV-STRLIGALI 271 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + D G++ P ++P +I +I IK +Q+ E I +LS DV D+ + G Sbjct: 272 MTHSDDNGLVLPSKISPIQIQIIQIKNTEQI-DQVVENIKDKLSDYRIDV--DNSDKSFG 328 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + A++ G P+++ +G + + ++++ I R Sbjct: 329 FKISEAEIKGIPIRIEIGPRDLENNQITISRR 360 >gi|331701570|ref|YP_004398529.1| threonyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] gi|329128913|gb|AEB73466.1| threonyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] Length = 648 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 86/389 (22%), Positives = 152/389 (39%), Gaps = 41/389 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + DL+ +SG +D Y ++M Sbjct: 263 GLPYWMPNGATIRRTIERYIVDKEVANGYQHVYTPVLANLDLYKQSGHWDHYREDMFPPM 322 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D + + P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 323 DMGDGEELELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 382 Query: 156 LMKDAYSF---DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 + D ++F D E K+ N M + ++H + R LS+ Sbjct: 383 TLNDGHTFVALDQIQEEFKNILNLM----VEVYHDFDINDYTFR---------LSYR--- 426 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSL 271 D T+ + D M + D + L+ + E A Y DV + +L Sbjct: 427 --DPKNTEKYFDDDEMWTRAQTMLKGAMDEMGLDYVEAEGEAAFYGPKLDVQTKT---AL 481 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIE 330 + +S ++ F ++ L + G DGK H M G + M A + Sbjct: 482 GNEETLSTIQLD----FMLPERFDL----HYIGEDGKQHRPVMIHRGLVSTMERFVAYLT 533 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP ++ +I + + D +KI +L + D E++G Sbjct: 534 EIYKGAFPTW---LAPHQVKIIPVSQDKHL--DYAKKINDQLRALKIRSSVDTRAEKMGY 588 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 A P ++VG + VS + V ++ Sbjct: 589 LIRDAQTHKIPYTLVVGDEEVSGNSVSVR 617 >gi|325297765|ref|YP_004257682.1| Prolyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] gi|324317318|gb|ADY35209.1| Prolyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] Length = 496 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 86/166 (51%), Gaps = 5/166 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ + F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DA-CEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I +D+ + DA E I +L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNDEQLKLIDAKVEGIVNKLRAMGVTVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L G P+++ +G + + ++ +E+ R T +E S + + Y + Sbjct: 355 YELKGVPVRLAMGGRDLENNTIELMRRDTLEKETRSCDGIEEYVKN 400 Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ +++ I SYR+LP Q R E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWSTYKNWINSYRDLPILCNQWANVVRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSY 181 ++ ++ T E ++ KM Y Sbjct: 173 WQEGHTAHATREEAEAEAQKMLHVY 197 >gi|171318442|ref|ZP_02907597.1| threonyl-tRNA synthetase [Burkholderia ambifaria MEX-5] gi|171096356|gb|EDT41258.1| threonyl-tRNA synthetase [Burkholderia ambifaria MEX-5] Length = 635 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ DA+ F + ++N + +S ++ G + I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMS---VYKDFGFEHIDIKLSLRPEQRA 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + E A+ G + +P E A Y + H Sbjct: 428 GTDETWDRAEQGLRDALTACGLSWEELPGEG-----------------AFYGPKIEYH-- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 + D+L + + +++ G +Y + + V + +G+M Sbjct: 469 -IKDALGRSWQCGTLQLDMVLPERLGAEY-------VAEDNSRRRPVMLHRAIVGSMERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H G W +APF+ ++NI A QV + + L K G V D Sbjct: 521 LGILIEHHAGAMPAW---LAPFQAVVLNI-AESQV--EYAHSLTQTLQKQGVRVAGDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P ++VG K V ++ R Sbjct: 575 EKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRAR 610 >gi|115351412|ref|YP_773251.1| threonyl-tRNA synthetase [Burkholderia ambifaria AMMD] gi|122323391|sp|Q0BG06|SYT_BURCM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|115281400|gb|ABI86917.1| Ser-tRNA(Thr) hydrolase [Burkholderia ambifaria AMMD] Length = 635 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ DA+ F + ++N + +S ++ G + I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMS---VYKDFGFEHIDIKLSLRPEQRA 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + E A+ G + +P E A Y + H Sbjct: 428 GTDETWDRAEQGLRDALTACGLSWEELPGEG-----------------AFYGPKIEYH-- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 + D+L + + +++ G +Y + + V + +G+M Sbjct: 469 -IKDALGRSWQCGTLQLDMVLPERLGAEY-------VAEDNSRRRPVMLHRAIVGSMERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H G W +APF+ ++NI A QV + + L K G V D Sbjct: 521 LGILIEHHAGAMPAW---LAPFQAVVLNI-AESQV--EYAHSLTQTLQKQGVRVAGDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P ++VG K V ++ R Sbjct: 575 EKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRAR 610 >gi|224438525|ref|ZP_03659445.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313144952|ref|ZP_07807145.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313129983|gb|EFR47600.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] Length = 603 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 3/162 (1%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD ++ L T + G+ WLP G + N+ ++ N G Sbjct: 198 YLFAIEEAKKRDHRKLGQEMGLFT-FDEEIGAGLPIWLPKGARLRQNLERLLTIALNERG 256 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W +SG YD+Y KE + +++ P + +++S +SY Sbjct: 257 YEPVRGPEILKSDVWKKSGHYDNY-KENMYFTTIDEQEYGIKPMNCVGHIKVYQSSPRSY 315 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLT 166 R LP FY+ + R E G++R REF DA+ F T Sbjct: 316 RELPLRFYEYGIVHRHEKSGVLHGLLRVREFTQDDAHIFCQT 357 >gi|324505892|gb|ADY42525.1| Threonyl-tRNA synthetase [Ascaris suum] Length = 706 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 85/419 (20%), Positives = 165/419 (39%), Gaps = 60/419 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G W P G + + +R + + G E+ P + ++ LW +SG + Y Sbjct: 314 FFHPLSPGAAFWYPKGAHIYNTLCNFMRNQYRKRGFTEVISPNMFNSKLWEQSGHWQHYS 373 Query: 91 KEMLRLADRNDKAMIYG------PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 M ++ + ++G P H + + + R+H LP + + R+EL Sbjct: 374 DGMFKIEVEKE---LFGLKPMNCPGHCLMYSHMPRTH----NELPMRYADFGVLHRNELS 426 Query: 145 PRF-GVMRSREFLMKDAYSF------DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 G+ R R F DA+ F + +G N ++V +L L + P Sbjct: 427 GALTGLTRVRRFQQDDAHIFCRPDQINSEIKGCIDFINYVYVDVFGFTFKLNLSTRP--- 483 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 E G +G I D E ++ + D P D A Y Sbjct: 484 EEGFLGD------IATWDHAEAELKKALDESGHPWELNPGD--------------GAFYG 523 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 DV + D+L + + ++ F ++ L A F + + V + Sbjct: 524 PKIDV---TIQDALKRYHQCATIQLD----FQLPQRFDL---AYFDENNERKRPVMVHRA 573 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 +G++ + A++ + GK WP ++P + +I + +V +++ +L + G Sbjct: 574 LLGSIERMTAILTENFGGK---WPFWLSPRQAKVITVHESQRV---YAKEVQKKLYEAGF 627 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +V +D+M + + Q A L F ++VG K + V ++ R +R ++ L+++I Sbjct: 628 EVEFDEMCSDTLNKQIRNAQLAQFNFILVVGPKEAQNGTVNVRTRDNAVRGEVKLDDLI 686 >gi|32490830|ref|NP_871084.1| hypothetical protein WGLp081 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340448|sp|Q8D3C0|SYT_WIGBR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|25166036|dbj|BAC24227.1| thrS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 636 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 90/409 (22%), Positives = 159/409 (38%), Gaps = 42/409 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I+++S G+ W G + IR++ + E+ P + DLW SG D+Y Sbjct: 255 IYENSPGMVFWHHNGWIIFRILEKFIRKKLKKFYYQEVKTPCIIDHDLWRLSGHLDNYKN 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF+ I+SY+ LPF + R+E G+M Sbjct: 315 YMFHTNSENKQYCI-KPMNCPAHVLIFKKKIRSYKELPFRISEFGSCHRNEPSGSLHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + + + + Y ++ G K I ++ + P IG D Sbjct: 374 RIRNFTQDDAHIFCMHDQILSEVSSCIKMIY-EVYSCFGFKKILVKLSTRPENRIGSD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E Q ++ + F I LN A Y + L Sbjct: 431 ----EIWDFAEKQ-------LELSLKKNKILFK--IDLNE-----GAFYGPKIEF---TL 469 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 DSL N++ I++ K + + K + V + +G+M Sbjct: 470 LDSL--NRKWQCGTIQLD--LCLANKLQ---AYYINNKNEKTNPVIIHRAILGSMERFIG 522 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 +I GK +W ++P ++ +IN+ DQ+ D +KI + + D E+ Sbjct: 523 IITEEFSGKYPLW---ISPIQVGVINVSV-DQI--DYVKKITKFFLQKKIRIISDLRNEK 576 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 I + L P +I G K + + + ++++ + SLE+ N Sbjct: 577 ISFKIREYTLRFIPYIIICGKKEMESNSISVRNKYGKQLKYSSLEKFYN 625 >gi|262052254|ref|ZP_06024459.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus 930918-3] gi|259159855|gb|EEW44894.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus 930918-3] Length = 645 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 85/404 (21%), Positives = 168/404 (41%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDRYQEDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ ++M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 QLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ + ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + + + D D +EN + L E+ A + ++ ++ + + Sbjct: 427 PEDKEKYFDDD--DMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEE 484 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSH 333 +S ++ F ++ L T+ G DG+ H + G+ + R VA + E + Sbjct: 485 TLSTAQLD----FLLPERFDL----TYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEET- 535 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 KG +P +AP ++ +I N+ H D ++ L G V DD E++G + Sbjct: 536 --KG-AFPTWLAPKQVQIIPVNVDLH----YDYARQLQDELKSQGVRVSIDDRNEKMGYK 588 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFI 632 >gi|269963856|ref|ZP_06178168.1| threonyl-tRNA synthetase [Vibrio harveyi 1DA3] gi|269831343|gb|EEZ85490.1| threonyl-tRNA synthetase [Vibrio harveyi 1DA3] Length = 655 Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 88/422 (20%), Positives = 160/422 (37%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR + + G E+ P + LW SG +D Y Sbjct: 270 MQQEAPGMVFWHHNGWSVFRDLEVFIRSKLDEYGYQEVKGPLMMDRVLWERSGHWDKYAD 329 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 330 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 388 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + N + + Y + G +I ++ + P +G D Sbjct: 389 RVRGFTQDDAHIFCTESQIQEEVTNCIKMVY-DTYQTFGFDNIVVKLSTRPEKRVGSD-- 445 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S + M+ P I E A Y + L Sbjct: 446 ----EIWDQSEEALKQSLESMEIPY--------------EIQEGEGAFYGPKIEF---TL 484 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + + M I G++ Sbjct: 485 YDCLD-------RAWQCGTV---QLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLER 534 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + L+NI + +++ +L K G D Sbjct: 535 FIGILIEEYAG---FFPTWLAPEQAILMNITDKQS---EYVQEVVQKLQKSGIRAKADLR 588 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++VG + + ++ ++ R +++ I Y S+ Sbjct: 589 NEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISS 648 Query: 445 NR 446 + Sbjct: 649 RK 650 >gi|40062682|gb|AAR37595.1| threonyl-tRNA synthetase [uncultured marine bacterium 314] Length = 638 Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 85/415 (20%), Positives = 163/415 (39%), Gaps = 47/415 (11%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 + S G W G + +R +Q + G E++ P + +LW +SG ++ +G+ M Sbjct: 258 EESPGAVFWHHKGWTLFQTLVGYMRLKQKKAGYKEINTPEILDKNLWEQSGHWEKFGENM 317 Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 + K P + IF +KSYR+LP + R E G++R Sbjct: 318 FTSETPDKKTFAIKPMNCPGCLQIFNQGLKSYRDLPLRLSEFGKVHRYEPSGALHGLLRV 377 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHE 209 R F DA+ F + + + + L I+ LG K++ ++ P +G D Sbjct: 378 RAFTQDDAHIFCTEDQITDECLSVTNL-ILEIYKDLGFKNVLLQYSDRPQKRVGDD---- 432 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + D E+ + + I ++ I + A Y D L D Sbjct: 433 --KIWDKAESALLKA-------IKQSKLKYE-------INKGEGAFYGPKIDF---VLRD 473 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVA 326 ++ + + +++ +LP + A++ +DG K V + G++ Sbjct: 474 TIGRDWQCGTLQVDL----------NLPSRLGASYVSSDGSKKVPVMLHRALFGSLERFI 523 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ + GK +W +AP + ++ I + + +KI+ + K G + D + Sbjct: 524 GILIEHYAGKLPLW---LAPIQAVVLPIASE---FDNYAKKIFEQCMKAGINTEVDLKNK 577 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 +I + L PL +I G K V V I+ + +E +SL+ I S + Sbjct: 578 KINYKIREHSLSKVPLLLICGEKEVKGKSVTIRKLGSEKQETLSLDRAIKKISQQ 632 >gi|170701132|ref|ZP_02892106.1| threonyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] gi|170133954|gb|EDT02308.1| threonyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] Length = 635 Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ DA+ F + ++N + +S ++ G + I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMS---VYKDFGFEHIDIKLSLRPEQRA 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + E A+ G + +P E A Y + H Sbjct: 428 GTDETWDRAEQGLRDALTACGLSWEELPGEG-----------------AFYGPKIEYH-- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 + D+L + + +++ G +Y + + V + +G+M Sbjct: 469 -IKDALGRSWQCGTLQLDMVLPERLGAEY-------VAEDNSRRRPVMLHRAIVGSMERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H G W +APF+ ++NI A QV + + L K G V D Sbjct: 521 LGILIEHHAGAMPAW---LAPFQAVVLNI-AESQV--EYAHSLTQTLQKQGVRVAGDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P ++VG K V ++ R Sbjct: 575 EKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRAR 610 >gi|152974217|ref|YP_001373734.1| prolyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022969|gb|ABS20739.1| prolyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 476 Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 78/156 (50%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FGT +S + +GK YV S+G+ + R++ +I D G+ Sbjct: 223 GKALQTGTSHNFGTNFSEAFEIKYLDRNGKWQYVHQTSWGV-STRMIGGLIMVHSDNNGL 281 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P VAP ++ ++ I H + + ++ R+ +V V D + G +F ++ Sbjct: 282 VIPPKVAPVQVMIVPIAQHKEGILEKVAELKERIQQVA-RVRIDASSKTPGWKFNEYEMK 340 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+++ VG K + ++V + R T +E +S++++ Sbjct: 341 GVPIRLEVGPKDIEKNQVVLVRRDTKEKECVSMDQL 376 >gi|329733112|gb|EGG69449.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193] Length = 644 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 85/404 (21%), Positives = 168/404 (41%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ ++M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 QLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ + ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + + + D D +EN + L E+ A + ++ ++ + + Sbjct: 427 PEDKEKYFDDD--DMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEE 484 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSH 333 +S ++ F ++ L T+ G DG+ H + G+ + R VA + E + Sbjct: 485 TLSTAQLD----FLLPERFDL----TYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEET- 535 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 KG +P +AP ++ +I N+ H D ++ L G V DD E++G + Sbjct: 536 --KG-AFPTWLAPKQVQIIPVNVDLH----YDYARQLQDELKSQGVRVSIDDRNEKMGYK 588 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFI 632 >gi|262403446|ref|ZP_06080004.1| threonyl-tRNA synthetase [Vibrio sp. RC586] gi|262349950|gb|EEY99085.1| threonyl-tRNA synthetase [Vibrio sp. RC586] Length = 642 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR++ N G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSVFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S M+ P I E A Y + L Sbjct: 433 ----EIWDKSEQALIDSLKAMEIPF--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVVVNITDKQA---DYAHEVAQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 576 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 612 >gi|327314606|ref|YP_004330043.1| threonine--tRNA ligase [Prevotella denticola F0289] gi|326946255|gb|AEA22140.1| threonine--tRNA ligase [Prevotella denticola F0289] Length = 649 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 148/415 (35%), Gaps = 65/415 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R E+ P + +L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTQLRLRLQDLLRRLLRPYNYQEVITPGIGGKNLYVTSGHYAHYGKDSFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + +++ +SY++LP + FR E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + PE K + L++F G + + I L Sbjct: 383 TFTQDDAHIF-VRPEQVKTEFETNIDIILKVFKTFGFDNYEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D E W AA EK + E Sbjct: 428 RDPNDKEKYIGSD-----------------------EVWEESEAAIKQACEEKGLKARVE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 LGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ AV+ G +W PD VA IS + D K+ A L Sbjct: 525 GSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYAFKVKAYLDAHDL 576 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 DD E+IG + +L P VIVG K ++ V ++ + G + M++E Sbjct: 577 RSIMDDRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTME 631 >gi|290996111|ref|XP_002680626.1| prolyl-tRNA synthetase [Naegleria gruberi] gi|284094247|gb|EFC47882.1| prolyl-tRNA synthetase [Naegleria gruberi] Length = 575 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 72/338 (21%), Positives = 127/338 (37%), Gaps = 63/338 (18%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ + PT E +M + IKS+R+LP Q R E + +RSREF ++ Sbjct: 147 DEPIALRPTSETIMYPSYAKWIKSHRDLPLKLNQWTNVVRWEFKHAVPFIRSREFYWQEG 206 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 +S E +K + Y R + + ++P ++ E + Sbjct: 207 HSAFKNFEQAKTEVYDILELYKRTYEEI--LAVP----------------VIKGKKTEAE 248 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F DF T + I N R Sbjct: 249 KFAGADF--------TTTIEAFIPTN--------------------------------GR 268 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ + G +S F+ D K V S+G+ + R + +I D KG++ Sbjct: 269 AVQAATSHHLGQNFSRMFKIEFEAEDKKSKLVYQNSWGL-STRSLGVMIMVHGDDKGMVL 327 Query: 341 PDSVAPFKISLINI--KAHDQVCRDACEK-IYARLSKVGCDVFWDDMGEQI-GSQFAVAD 396 P VA ++ LI + K D + K I+A+L + G + DD E+ G ++ + Sbjct: 328 PPRVAFTQVVLIPLYFKNKDNSELETKSKTIFAQLEENGVRIKLDDRLEKTPGWKYNYWE 387 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L G PL++ +G K + + + R G + + LE++ Sbjct: 388 LRGVPLRIEIGPKDLENGVAMLCRRDNGEKWSVPLEQL 425 >gi|282877699|ref|ZP_06286514.1| threonine--tRNA ligase [Prevotella buccalis ATCC 35310] gi|281300271|gb|EFA92625.1| threonine--tRNA ligase [Prevotella buccalis ATCC 35310] Length = 654 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 91/417 (21%), Positives = 155/417 (37%), Gaps = 67/417 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R+ Q R G E+ P + S +L+V SG Y YGK+ + Sbjct: 263 KGMPIWLPKGTELRLRLQEMLRKIQKRFGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 +D+ + P + ++F +SY++LP + +R E G+ R R Sbjct: 323 IHTPEDDEEYMLKPMNCPHHCEVFACKPRSYKDLPLRIAEFGTVYRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K+ + ++ +F + + I L Sbjct: 383 SFTQDDAHIF-CRPDQVKNEFLRVMDIIQAVFTIFNFDNFEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D E W A + EK D+ Sbjct: 428 RDPNDKEKYIGSD-----------------------EVWAESEQAIIEACKEKGLDAKVA 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 YGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFKLEYTAEDNTKQTPVMVHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEK-IYARLSKVG 376 G++ AV+ G +W P+ VA IS QV + E+ I A + Sbjct: 525 GSLERFTAVLIEHTAGHFPLWLTPEQVAILPISEKFNGYAQQVVKYFTEQDIRATI---- 580 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 DD E+IG + +L P VIVG K ++ V ++ + G + M +E+ Sbjct: 581 -----DDRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMRKQGGGEQATMKMED 632 >gi|302346317|ref|YP_003814615.1| threonine--tRNA ligase [Prevotella melaninogenica ATCC 25845] gi|302150675|gb|ADK96936.1| threonine--tRNA ligase [Prevotella melaninogenica ATCC 25845] Length = 649 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 90/416 (21%), Positives = 149/416 (35%), Gaps = 65/416 (15%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + ++R E+ P + +L+V SG Y YGK+ + Sbjct: 262 GKGLPIWLPKGTQLRLRLQELLRRLLRPYNYQEVITPGIGGKNLYVTSGHYAHYGKDAFQ 321 Query: 96 L--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 D+ + P + +I+ +SY++LP + FR E G+ R Sbjct: 322 PIHTPEEDEEYMLKPMNCPHHCEIYAHKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRV 381 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F + P+ K + L++F G + + I Sbjct: 382 RTFTQDDAHIF-VRPDQVKAEFENNIDIILKVFKTFGFDNYEAQ--------------IS 426 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 L D + + + D E W AA + EK ++ Sbjct: 427 LRDPEDKEKYIGSD-----------------------EVWEESEAAIKEACAEKGLNARV 463 Query: 273 ENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYG 318 E + G + +G + GT Y+LP + D K V + Sbjct: 464 ELGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMVHRAP 523 Query: 319 IGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G++ AV+ G +W PD VA IS + D K+ A Sbjct: 524 FGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYARKVKAYFDAHD 575 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 DD E+IG + +L P VIVG K ++ V ++ + G + M++E Sbjct: 576 VRSIMDDRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTME 631 >gi|325860506|ref|ZP_08173616.1| threonine--tRNA ligase [Prevotella denticola CRIS 18C-A] gi|325481987|gb|EGC85010.1| threonine--tRNA ligase [Prevotella denticola CRIS 18C-A] Length = 649 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 148/415 (35%), Gaps = 65/415 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R E+ P + +L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTQLRLRLQDLLRRLLRPYNYQEVITPGIGGKNLYVTSGHYAHYGKDSFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + +++ +SY++LP + FR E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + PE K + L++F G + + I L Sbjct: 383 TFTQDDAHIF-VRPEQVKTEFETNIDIILKVFKTFGFDNYEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D E W AA EK + E Sbjct: 428 RDPNDKEKYIGSD-----------------------EVWEESEAAIKQACEEKGLKARVE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 LGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ AV+ G +W PD VA IS + D K+ A L Sbjct: 525 GSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYAFKVKAYLDAHDV 576 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 DD E+IG + +L P VIVG K ++ V ++ + G + M++E Sbjct: 577 RSIMDDRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTME 631 >gi|167769368|ref|ZP_02441421.1| hypothetical protein ANACOL_00694 [Anaerotruncus colihominis DSM 17241] gi|167668336|gb|EDS12466.1| hypothetical protein ANACOL_00694 [Anaerotruncus colihominis DSM 17241] Length = 635 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 85/413 (20%), Positives = 161/413 (38%), Gaps = 51/413 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I++ G + P G + + + REE + G E+ P + + +LW SG +D Y K Sbjct: 255 IYEEGPGFPFFFPKGMILRNLLESFWREEHQKHGYQEIRTPLILNEELWHRSGHWDHY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 + + +D+ P + +++ + SYR+LP ++ + R EL G+M Sbjct: 314 DNMYTTKIDDRDYAIKPMNCPGGILVYKRRMNSYRDLPQRLAELGIVHRHELSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTP---EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 R R F DA+ F +TP E + S R+F Sbjct: 374 RVRCFTQDDAHIF-MTPDQIEAEVLGVINLIDSIYRVF---------------------G 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 ++ + T S++ + + +D ++ E A Y D H L Sbjct: 412 FDYFLELSTRPEDSMGSEEQWETATAALRKALEDNGRPYTVNEGDGAFYGPKIDFH---L 468 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMR 323 DS+ R + G I F ++ L + G+DG+ H V + G++ Sbjct: 469 RDSI-------GRTWQCGTIQLDFQMPERFDL----AYIGSDGERHRPVMVHRTAFGSIE 517 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +W +AP +I ++ + D+ A + + L++ G + D Sbjct: 518 RFIGILIEHYAGAFPLW---LAPVQIKVLPVT--DEHIPYA-QSVADTLTRAGLRIELDS 571 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E++G + A L P +++G K +V ++ R G M L + + Sbjct: 572 RNEKVGYRIREAQLQKIPYMLVLGGKEAESGEVAVRDRRDGKTTTMLLADFVE 624 >gi|325954887|ref|YP_004238547.1| threonyl-tRNA synthetase [Weeksella virosa DSM 16922] gi|323437505|gb|ADX67969.1| threonyl-tRNA synthetase [Weeksella virosa DSM 16922] Length = 640 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 85/420 (20%), Positives = 155/420 (36%), Gaps = 65/420 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + + ++Q + G + P + +L+V SG Y YG + + Sbjct: 259 QGLPLWLPKGAALRRKLENFLLKQQQKLGYEMVITPHIGQKELYVTSGHYAKYGADSFQP 318 Query: 97 ADRNDKA--MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ + P + +I+++ SYR+LP + + +R E G+ R R Sbjct: 319 IQTPNEGEEFLLKPMNCPHHCEIYKTSQWSYRDLPKRYAEFGTVYRYEQSGELHGLTRVR 378 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F T + + K+ L +F LG + + I L Sbjct: 379 GFTQDDAHIF-CTSDQLLEEFKKVIDLVLFVFESLGFDNYSAQ--------------ISL 423 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A EK ++ E Sbjct: 424 RDPNNKEKYIGTD-----------------------ENWEKAENAIITAAKEKNLPTVVE 460 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + + G + +G + GT Y+LP ++ G D + H V + Sbjct: 461 HGEAAFYGPKLDFMVKDALGRQWQLGTIQVDYNLPERFELSYIGPDNQAHRPVMIHRAPF 520 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+M A++ + G +W PD IS + + EK+ L++ Sbjct: 521 GSMERFIAILLENTAGNLPLWLTPDVFTILPIS--------EKYVEFGEKVLNLLAEQEI 572 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 + D+ E+ G + A++ P +IVG K + V ++ G +M +EE I + Sbjct: 573 NGLIDNRNEKTGKKIRDAEVKKIPYMLIVGEKEEENGTVSVRKHGEGDLGEMKIEEFIQF 632 >gi|187932904|ref|YP_001884583.1| threonyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B] gi|238691610|sp|B2TIT5|SYT_CLOBB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|187721057|gb|ACD22278.1| threonine--tRNA ligase [Clostridium botulinum B str. Eklund 17B] Length = 643 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 84/416 (20%), Positives = 157/416 (37%), Gaps = 54/416 (12%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G K + + + +E+ R G + P + +DL+ SG +D Y M L Sbjct: 259 QGLPLLMPKGAKIVQTLQRWVEDEEERRGYVLTKTPLMAKSDLYKISGHWDHYKDGMFVL 318 Query: 97 ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D ++ P I+ + SYR+LP + + FR+E G++R R Sbjct: 319 GDEEKDEEVFALRPMTCPFQYTIYNAEQHSYRDLPIRYGETSTLFRNESSGEMHGLIRVR 378 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 +F + D + +TPE + + + + LG I D+S+ F Sbjct: 379 QFTLADGHLI-VTPEQLEEEFKGVLELIQYLMKTLG------------IDEDISYRFSKW 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD---VHNEKLFDS 270 D T+ + + P D ++ +I++ Y D + KL Sbjct: 426 -DPNNTEKYIND-------PEAWNKTQD--TMRTILDHLKINYVEADDEAAFYGPKL--- 472 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATF------KGADGKDHYVQMGSYGIGAMRV 324 + R + F + ++ F K + K Y+ S IG Sbjct: 473 -----DLQCRNVHGKEDTLFTVQIDFALAERFDMSYIDKNGEKKRPYIIHRS-SIGCYER 526 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 A++ + G W ++P ++ ++ I D E + L G + D Sbjct: 527 TLAMLIEKYAGAFPTW---LSPVQVKVLPISDK---YNDYAESVVKSLRNKGVRIEADYR 580 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT----GIREDMSLEEVIN 436 E+IG + A L P ++VG K ++++V ++ R I+ D E ++N Sbjct: 581 AEKIGYKIREARLERTPYILVVGEKEAANNEVSVRSRKNDDEGAIKLDAFTERLLN 636 >gi|116328741|ref|YP_798461.1| threonine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331652|ref|YP_801370.1| threonine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280605|sp|Q04R58|SYT_LEPBJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122283474|sp|Q04ZG7|SYT_LEPBL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116121485|gb|ABJ79528.1| Threonine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125341|gb|ABJ76612.1| Threonine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 639 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 4/160 (2%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + + G W P G +++ +R E N+ Sbjct: 234 QYLFQIEEAKKRDHRKIGKELDLFS--FQKEGPGFPFWHPKGTILWNSLADYLRAECNKR 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + S++LW +SG +D++ + M D +++ P + + I++ H+ S Sbjct: 292 GYQEIKTPAVLSSELWKKSGHWDNFHENMY-FTDIDEEDYALKPMNCPGCSLIYKHHLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 YR LP F + R EL G+ R R F D++ + Sbjct: 351 YRELPLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIY 390 >gi|329115645|ref|ZP_08244367.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001] gi|326695073|gb|EGE46792.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001] Length = 645 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 90/433 (20%), Positives = 165/433 (38%), Gaps = 57/433 (13%) Query: 17 DAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + + G+ H + + G W G + + +R Q R G E+ P Sbjct: 240 EAEKRDHRRIGKEMGLFHFQEEAVGQVFWHAKGWRLYTALQDYMRRAQTRHGYQEVRTPQ 299 Query: 74 LQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 L LW SG +D Y M + + +K + P + IFR ++SYR LP Sbjct: 300 LVDRALWEASGHWDKYRHHMFIATVEDENKTLALKPMNCPCHVQIFRHGLRSYRELPLRM 359 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGL 190 + R E G+MR R F DA+ F E FV L ++ LG Sbjct: 360 AEFGACHRYEPSGALHGLMRVRGFTQDDAHIF--CTEDQIADETVRFVKMLHDVYQDLGF 417 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP-IPSENTDFD---DIISLN 246 + + ++ P S E A+ + C+ +++ P E + + + + Sbjct: 418 EHVRVKFADRPEQRAGSDEVWDKAENALKEA-CTVAGVEYEHNPGEGAFYGPKLEFVLRD 476 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 +I W V LPE + A++ G D Sbjct: 477 AIGRDWQCGTLQVDLV--------LPER-----------------------LDASYIGED 505 Query: 307 -GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA- 364 G+ V + +G+ ++ H G+ +W +AP ++ + +I + DA Sbjct: 506 SGRHRPVMLHRAILGSFERFLGILIEQHAGRFPLW---LAPVQVVVASIVS------DAA 556 Query: 365 --CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E++ A L + G V D ++I ++ + P+ ++VG + + V ++ Sbjct: 557 PYAEEVAAALREAGLAVEADVRNDKINAKVREHSVARVPVILVVGRREAEERTVAMRRLG 616 Query: 423 TGIREDMSLEEVI 435 T +E +SL + + Sbjct: 617 TQAQETLSLNDAV 629 >gi|307294661|ref|ZP_07574503.1| threonyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] gi|306879135|gb|EFN10353.1| threonyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] Length = 660 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 93/430 (21%), Positives = 153/430 (35%), Gaps = 68/430 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G W P G + A +R + G E+ P + A W +SG + Y + Sbjct: 260 LQQEAHGSVFWHPKGYLIWRELEAYMRRAIDEAGYREVKTPQVMDARQWEQSGHWGKYRE 319 Query: 92 EMLRLADRNDKAMIYGPTHEEVM-------------TDIFRSHIKSYRNLPFTFYQIQLK 138 M + D GP E IF+ IKSYR+LP FY+ Sbjct: 320 NMFVIPDEVPNVEDEGPLVSEAADWMALKPMNCPAHILIFKQGIKSYRDLPLRFYENGCC 379 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 R+E G+MR R+F DA+ F V +R F L + Sbjct: 380 HRNEPHGALHGLMRVRQFTQDDAHIF---------CREDQIVEEVRAFCALADR------ 424 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 I D + + + F +++ D E+ A Sbjct: 425 ----IYKDFGFTYSIKLALRPEKRFGTEEMWD-----------------KAEEELRNAVA 463 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIE------VGHIFYFGTKYS---LP--MSATFKGAD 306 A E ++ LP A +E +G + GT S LP + A++ G D Sbjct: 464 AAGLNTPEYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYVGED 523 Query: 307 GKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 G+ H M I G+ ++ + GK +W +AP + + I + D Sbjct: 524 GERHRPVMLHRAIFGSYERFIGILIEHYAGKFPLW---LAPVQAVVATIVSD---ADDYA 577 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + +L VG D E+I + L P ++VG + + V ++ Sbjct: 578 QTVAEKLRAVGIRAETDVRNEKINYKVREHSLAKVPNLLVVGRREADEGTVALRELGKEG 637 Query: 426 REDMSLEEVI 435 + +S+E+VI Sbjct: 638 QTILSVEDVI 647 >gi|313205743|ref|YP_004044920.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|312445059|gb|ADQ81414.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|315022861|gb|EFT35885.1| threonyl-tRNA synthetase [Riemerella anatipestifer RA-YM] Length = 641 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 92/428 (21%), Positives = 169/428 (39%), Gaps = 63/428 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-- 95 G+ WLP G + + + E Q + G + P + + +L+ SG Y+ YG + + Sbjct: 260 GLPLWLPKGAALRKKLESFLSEAQRKGGYEFVMTPHIGNIELYKTSGHYEKYGADSFQPI 319 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + P + +++++ SY++LP + + +R E G+ R R Sbjct: 320 KTPHVGEEFLLKPMNCPHHCEVYKAQQWSYKDLPKRYAEFGTVYRYEQSGELHGLTRVRG 379 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK----SIPMRAESGP---IGGDLS 207 F DA+ F TP+ + K+ L +F LG + + +R + IG + + Sbjct: 380 FTQDDAHLF-CTPDQLLEEFEKVIDLVLYVFKSLGFEDFIAQVSLRDKENRAKYIGSEEN 438 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E E+ + + ++N LN++VE A + Sbjct: 439 WE------KAESAIITA---------AKNK------GLNTVVEYGEAAFYGPK------- 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAM-R 323 D + K R ++G I Y+LP T+ G+D + H + + G+M R Sbjct: 471 LDFMV--KDALGRSWQLGTI---QVDYNLPERFDLTYVGSDNERHRPIMIHRAPFGSMER 525 Query: 324 VVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 +A +IE++ G +W PD IS + D +K+ L Sbjct: 526 FIAILIENTA-GDFPLWLNPDQYILLPIS--------EKYTDYAKKVSQLLENHDICGLV 576 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 D+ E+ G + A++ P +IVG + V ++ R G +MS+E + Y Sbjct: 577 DERNEKTGKKIRDAEMKKIPFMLIVGENEAGNQTVSVRKRGEGDLGEMSIESFVEY---- 632 Query: 442 FSNNRPVL 449 F N V+ Sbjct: 633 FKNEAKVI 640 >gi|310815279|ref|YP_003963243.1| threonyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] gi|308754014|gb|ADO41943.1| threonyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] Length = 648 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 86/421 (20%), Positives = 158/421 (37%), Gaps = 62/421 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R Q + G +E++ P + + LW +SG +++Y Sbjct: 260 MQEEAPGQVFWHPNGWTVYTALQDYMRRRQRKDGYVEVNTPQVVNRVLWEKSGHWENYRD 319 Query: 92 EM--LRLADRNDKAMIYG---PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + + + K + P + IF +KSYR LP + R E Sbjct: 320 NMFIVEVDEEGAKEKVVNALKPMNCPCHVQIFNHGLKSYRELPLRMAEFGSCARYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP--- 201 G+MR R F D + F E S K F+ +L ++ LG +S ++ + P Sbjct: 380 LHGIMRVRGFTQDDGHIF--CTEDQIESETKKFIEFLASVYADLGFESWRVKLSTRPEKR 437 Query: 202 IGGDLSHEFIVLADTGETQV--FCSKDFMDFPIPSENTDFD----DIISLNSIVEQWTAP 255 IG + S D E + C K D+ + F + + ++I W Sbjct: 438 IGTEESW------DHAEQSLGNACRKAGYDYELQEGEGAFYGPKLEFVLTDAIGRDW--- 488 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQM 314 ++ +LPE + A + G DG H + + Sbjct: 489 -----QCGTLQVDPNLPER-----------------------LDANYIGQDGAKHRPIML 520 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 +G+ ++ + GK W +AP ++ + +I + D ++ A LS Sbjct: 521 HRACLGSFERFVGILIENFAGKLPFW---LAPRQVVVASIVSD---ADDYVHEVVAALSA 574 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G D E+I + L PL + +G++ V + V ++ MSL+ + Sbjct: 575 AGVRAEADTRNEKINYKVREHSLGKVPLILAIGAREVEERTVTVRRLGENQTATMSLDAI 634 Query: 435 I 435 + Sbjct: 635 L 635 >gi|295677048|ref|YP_003605572.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1002] gi|295436891|gb|ADG16061.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1002] Length = 635 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 90/424 (21%), Positives = 163/424 (38%), Gaps = 53/424 (12%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + + H S G+ W P G V +R N Sbjct: 231 YLHMLEE----AEKRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVND 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAM--IYGPTHEEVMTDIFRS 120 G +E+ P + LW SG + +Y + M +++ D A+ + P H +F Sbjct: 287 AGYLEIKTPLIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGH----VQVFNH 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE--GSKHSYNKM 177 ++SYR+LP + + R+E G+MR R F+ DA+ F + G ++N + Sbjct: 343 GLRSYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFIGESIAFNTL 402 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +S R F G ++ ++ P + E A+ G + + +P E Sbjct: 403 AMSVYRDF---GFDNVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEELPGEG- 458 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 A Y + H + D+L + + +++ G +Y Sbjct: 459 ----------------AFYGPKVEYH---IKDALGRSWQCGTLQLDMVLPERLGAEY--- 496 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + + + + +G+M ++ H G W +AP ++ ++NI A Sbjct: 497 ----VAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAW---LAPMQVVVMNI-AE 548 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 Q + + + L K G V D E+I + L P ++VG K V Sbjct: 549 SQA--EYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVA 606 Query: 418 IKHR 421 ++ R Sbjct: 607 VRAR 610 >gi|167907142|ref|ZP_02494347.1| threonyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177] Length = 670 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 2/170 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G W P G + A +R Q G +E++ P + LW SG + +Y Sbjct: 257 QEDAPGAVFWHPRGWAVFQELIAYMRRRQQDAGYVEVNSPDVMDRSLWEISGHWQNYRDH 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + +A+ P + ++R +KSYR+LP + R E G++R Sbjct: 317 MFTTETEDGRALALKPMNCPGSALLYRHGLKSYRDLPIRMGEFGKVHRYEPSGSLHGLLR 376 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 R F DA+ + TP+ ++ L I+ + G + ++ + P Sbjct: 377 VRHFTQDDAHIY-CTPQQMDAECREVVTLVLDIYRQFGFDEVRIKLSTRP 425 >gi|77458158|ref|YP_347663.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] gi|123758422|sp|Q3KEY2|SYT_PSEPF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77382161|gb|ABA73674.1| putative threonyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] Length = 640 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 9/196 (4%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRDNGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F DA+ F T E + + ++ G Sbjct: 356 EFGACHRNEPSGALHGIMRVRAFTQDDAHIF-CTEEQMQAESAAFIKLTMDVYRDFGFTD 414 Query: 193 IPMRAESGP---IGGD 205 + M+ + P +G D Sbjct: 415 VEMKLSTRPEKRVGSD 430 >gi|238922273|ref|YP_002935787.1| threonyl-tRNA synthetase [Eubacterium eligens ATCC 27750] gi|238873945|gb|ACR73653.1| threonyl-tRNA synthetase [Eubacterium eligens ATCC 27750] Length = 591 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 82/405 (20%), Positives = 154/405 (38%), Gaps = 62/405 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +LP G + I++++ + G + + P + + +L+ SG +D Y + M Sbjct: 201 RGLPMFLPKGYTVWQELENYIKDKERKLGYLHVMTPCVGTVNLYKTSGHWDHYKENMFPA 260 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P + I+ + + SY++LP +I FR E G+ R R F Sbjct: 261 MEVEGESFVLRPMNCPHHMMIYANKMHSYKDLPIRIGEIAHDFRFEASGTLKGIERGRHF 320 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 DA+ F +TPE + + K+ DL E Sbjct: 321 CQNDAHLF-VTPEQIESEFAKVV--------------------------DLIFE------ 347 Query: 216 TGETQVFCSKDF--MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 KDF D+ D +D + + E W A V N+ + E Sbjct: 348 -------TYKDFNITDYRCVLSLRDPEDKVKYHDDDEMWNNAENALRKVLNDIGIEYTEE 400 Query: 274 NKRVSARG--IEVGHIFYFGTKYSL-----------PMSATFKGADGKDHY-VQMGSYGI 319 + G ++V G +Y+L + T+ DG+ V + + Sbjct: 401 IGEAAFYGPKLDVNVKPAIGNEYTLSTCQLDFCLPSKFNLTYIDKDGQRKTPVVLHRAIL 460 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G++ A I G +W +AP + +++ +K D+ +Y L+ G V Sbjct: 461 GSLDRFMAYILEETKGNLPLW---LAPVQATILPVKNEDEELNAYAHGLYDYLADNGIRV 517 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 D+ E++G + A + P +++G +D V +RL G Sbjct: 518 EIDERAEKLGYRVREAQVKKIPYLIVLGKNEAADGTV--SYRLHG 560 >gi|304319895|ref|YP_003853538.1| Threonyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] gi|303298798|gb|ADM08397.1| Threonyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] Length = 657 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 57/148 (38%), Gaps = 22/148 (14%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 G + H KG WL L A IR + G E+ P L A LW SG + Y Sbjct: 262 GSVFWHPKGYTMWLAL--------EAYIRRRLDAAGYKEVKTPQLIDAKLWQSSGHWGKY 313 Query: 90 GKEMLRLADR-------------NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 + M + D K M P + IFR I SYR+LP + Sbjct: 314 SQNMFVVPDEVPDVEGEGPVIDPEAKLMAVKPMNCPAHVQIFRQGITSYRDLPIRMAEFG 373 Query: 137 LKFRDELRPRF-GVMRSREFLMKDAYSF 163 R+E G+MR R+F DA+ F Sbjct: 374 CCHRNEPHGALHGIMRVRQFTQDDAHIF 401 >gi|167045283|gb|ABZ09941.1| putative anticodon binding domain protein [uncultured marine crenarchaeote HF4000_APKG9P22] Length = 479 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/343 (19%), Positives = 131/343 (38%), Gaps = 68/343 (19%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E + +F I+S+R+LP R E++ +R+ EFL ++ + T Sbjct: 111 PTSETLAYSLFSKWIRSWRDLPLKMNFWNSALRAEIKGTKPFLRTSEFLWQEGH----TV 166 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 +K K L ++ + + E V TG+ Sbjct: 167 HATKDEAEKEVADILELYKKT-----------------IEEELAVPVITGKK-------- 201 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 SE F V+ + L +P+ K +++G Sbjct: 202 ------SEKDKF-------------------VGAVYTDTLESLMPDGK-----ALQMGTS 231 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + G +S P + + + + S+G+ + R++ +I D KG++ P VAP Sbjct: 232 HFLGQNFSKPFDVKYLDENNVETFAWQTSWGV-SWRLIGGMIMIHGDDKGLVLPPKVAPI 290 Query: 348 KISLINI----KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI--GSQFAVADLLGFP 401 ++ +I I + V + AC+ I LS V DD EQ+ G +F ++ G P Sbjct: 291 QVVIIPIYYSNDEKENVLQTACQ-IKDSLSNNDIRVHLDDR-EQLTPGFKFNDWEMRGIP 348 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +++ +G K ++ ++ + R T + + ++ + S N Sbjct: 349 IRIEIGPKDIAKNQAVLVRRHTQTKTSIEMDSLTEKISSELKN 391 >gi|149916340|ref|ZP_01904860.1| threonyl-tRNA synthetase [Roseobacter sp. AzwK-3b] gi|149809794|gb|EDM69646.1| threonyl-tRNA synthetase [Roseobacter sp. AzwK-3b] Length = 663 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 16/207 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L L+E AE H+ + R + H + + G W P G + +R +Q Sbjct: 234 KDYLTFLEE----AEKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWTIYTTLQDYMRRQQ 289 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-----IYGPTHEEVMTD 116 R G +E++ P + LW SG +D Y + M + D A P + Sbjct: 290 RRGGYVEVNTPQVVDRKLWEASGHWDKYQEHMFIVEVDEDHAREKSINALKPMNCPCHVQ 349 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IF +KSYR+LP + R E G+MR R F DA+ F E + Sbjct: 350 IFNRGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIF--CREDQIEAET 407 Query: 176 KMFVSYL-RIFHRLGLKSIPMRAESGP 201 K F+ +L I+ LG ++ P Sbjct: 408 KKFIGFLSEIYRDLGFSDFKVKFSDRP 434 >gi|91217375|ref|ZP_01254335.1| prolyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] gi|91184483|gb|EAS70866.1| prolyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] Length = 492 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 5/149 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ + F GK YV S+G+ + R++ A++ + D G+ Sbjct: 234 GKALQAGTSHFLGENFAKAFNVKFTSDQGKQEYVWATSWGV-STRLMGALVMTHSDDNGL 292 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDD-MGEQIGSQFAV 394 + P ++AP ++ ++ I +++ EK I L G V +D+ + G +FA Sbjct: 293 VLPPNLAPIQVVIVPIFKNEEQLELVSEKANLIANDLKSKGVRVKFDNRTTHKPGWKFAE 352 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +L G PL++ +G K + VE+ R T Sbjct: 353 YELKGIPLRIAIGPKDLEKGTVELARRDT 381 Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ ++ PT E V+ + F+ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 116 DEELVVRPTSEAVIWNTFKGWIQSYRDLPLKINQWANVVRWEMRTRL-FLRTTEFLWQEG 174 Query: 161 YS 162 ++ Sbjct: 175 HT 176 >gi|311279396|ref|YP_003941627.1| threonyl-tRNA synthetase [Enterobacter cloacae SCF1] gi|308748591|gb|ADO48343.1| threonyl-tRNA synthetase [Enterobacter cloacae SCF1] Length = 642 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 87/411 (21%), Positives = 153/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G + + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGENNERQVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTRKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVETGKVAVRTRRGKDLGSMDVNEVI 625 >gi|134282011|ref|ZP_01768717.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|134246540|gb|EBA46628.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305] Length = 681 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 2/170 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G W P G + A +R Q G +E++ P + LW SG + +Y Sbjct: 268 QEDAPGAVFWHPRGWAVFQELIAYMRRRQQDAGYVEVNSPDVMDRSLWEISGHWQNYRDH 327 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + +A+ P + ++R +KSYR+LP + R E G++R Sbjct: 328 MFTTETEDGRALALKPMNCPGSALLYRHGLKSYRDLPIRMGEFGKVHRYEPSGSLHGLLR 387 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 R F DA+ + TP+ ++ L I+ + G + ++ + P Sbjct: 388 VRHFTQDDAHIY-CTPQQMDAECREVVTLVLDIYRQFGFDEVRIKLSTRP 436 >gi|167747292|ref|ZP_02419419.1| hypothetical protein ANACAC_02006 [Anaerostipes caccae DSM 14662] gi|167653270|gb|EDR97399.1| hypothetical protein ANACAC_02006 [Anaerostipes caccae DSM 14662] Length = 478 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 80/406 (19%), Positives = 159/406 (39%), Gaps = 73/406 (17%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLR 95 KG P G +N+ ++ + TG +++P + + L E + + E+ Sbjct: 38 KGCMILRPNGYAIWENIQKVMDAKFKETGVENVAMPMFIPESLLEREKDHVEGFAPEVAW 97 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + +K + PT E + D + + I+SYR+LP + Q +++ RP Sbjct: 98 VTHGGNKKLEERLCVRPTSETLFCDFYSNIIQSYRDLPKLYNQWVSVVRWEKSTRP---F 154 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EF ++ ++ T + ++ +M Y Sbjct: 155 LRTSEFYWQEGHTAHATADEAEERTVQMLNMY---------------------------- 186 Query: 210 FIVLADTGETQVFCSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 AD FC + ++ P+ + T+ + N A Y + +H+ K Sbjct: 187 ----AD------FCEQ-YLAIPVVKGQKTEKEKFAGAN-------ATYTIEALMHDGKAL 228 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 S G FG ++ + + K YV S+G+ + R++ A+ Sbjct: 229 QS--------------GTSHNFGDGFAKAFDIQYTDKNNKLQYVHQTSWGM-STRIIGAI 273 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I D G++ P +AP + ++ I + + E+I LSK V DD + Sbjct: 274 IMVHGDDSGLVLPPKIAPVQTMIVPIMQKKEGVLEKAEEIRECLSK-NYKVKVDDSDKSP 332 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F+ ++ G P ++ +G K + ++ I R T + +SL+E+ Sbjct: 333 GWKFSEQEVQGIPTRIEIGPKDIEKNQAVIVRRDTREKIFVSLDEI 378 >gi|134292577|ref|YP_001116313.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4] gi|134135734|gb|ABO56848.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4] Length = 402 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 6/139 (4%) Query: 31 MIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDS 88 + HQ S G W P G + IR + G E+ P + S DLW SG ++ Sbjct: 15 LFHQQDESPGGIFWHPRGMVLYRVIEEYIRVRMRQAGFSEVRTPQILSRDLWERSGHWEK 74 Query: 89 YGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 +G M L +DRN + P IF+ +SYR+LP + + R E Sbjct: 75 FGPNMFSLESDRNPYCL--KPMSCPCHVQIFKKGSRSYRDLPIRYCEFGAVHRAEPSGAL 132 Query: 148 -GVMRSREFLMKDAYSFDL 165 G+MR+R F DA+ L Sbjct: 133 HGLMRARAFTQDDAHVLCL 151 >gi|294141074|ref|YP_003557052.1| threonyl-tRNA synthetase [Shewanella violacea DSS12] gi|293327543|dbj|BAJ02274.1| threonyl-tRNA synthetase [Shewanella violacea DSS12] Length = 642 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 83/397 (20%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + + IR++ + E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWRLFLELETFIRQKLGQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTKSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + + G K+I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQVQQEVSACIQMVYDTYETFGFKNIVVKLSTRPEQRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A+ Q + D +P E + I L Sbjct: 432 -EMWDRAEEALKQALTANDIEFEILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + GK +P +AP ++ ++NI + +++ L + G D Sbjct: 521 FLGILIEEYAGK---FPTWLAPMQVVVMNITDKQS---NYADEVVNLLKENGIRASKDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|312961943|ref|ZP_07776440.1| Threonyl-tRNA synthetase [Pseudomonas fluorescens WH6] gi|311283753|gb|EFQ62337.1| Threonyl-tRNA synthetase [Pseudomonas fluorescens WH6] Length = 640 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 78/196 (39%), Gaps = 9/196 (4%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R + H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLNLFHLQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M N I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTQSENRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F DA+ F T E + + ++ G Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF-CTEEQMQAESAAFIKLTMDVYRDFGFTE 414 Query: 193 IPMRAESGP---IGGD 205 + M+ + P +G D Sbjct: 415 VEMKLSTRPEKRVGSD 430 >gi|315498771|ref|YP_004087575.1| threonyl-tRNA synthetase [Asticcacaulis excentricus CB 48] gi|315416783|gb|ADU13424.1| threonyl-tRNA synthetase [Asticcacaulis excentricus CB 48] Length = 640 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 154/415 (37%), Gaps = 52/415 (12%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL + + H + +G+ W P G + A +R + G +E+ P Sbjct: 239 EAEKRDHRKLGRQMNLFHMQEEGRGMVFWHPHGWTLWRTLEAYMRRRLDAAGYVEVKTPQ 298 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + W +SG +D Y M + + P + IF+ ++SY+ LP Sbjct: 299 VLDRTFWEKSGHWDKYRPNMFVCETVEGETLSLKPMNCPGHVQIFKVGLRSYKELPIRMA 358 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR-LGLK 191 + R E G+MR R F DA+ F E F++ R H LG++ Sbjct: 359 EFGACHRYEPSGSLHGLMRVRGFTQDDAHIF--CREDQIVEETTKFITLCRQVHADLGMQ 416 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + E I LA E + S +F D I E Sbjct: 417 A----------------EHIALATRPEVRA-GSDEFWDKAEAQMAEAARAAGVEPVIAEG 459 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGAD 306 A YA D + D+ +G + GT Y LP + A + D Sbjct: 460 DGAFYAPKLDF---IVRDA-------------IGRTWTCGTIQLDYVLPERLGAEYVAED 503 Query: 307 G-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 G + V + +G+ +I ++ GK +W +AP ++ + I + D Sbjct: 504 GSRQRPVMLHRAILGSFERFIGIIIENYGGKFPLW---LAPIQVVVAPITSD---ANDYA 557 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +++ ++L VG V D E+I + L P+ +VG K +V +++ Sbjct: 558 QQVASKLRSVGLRVDTDLRNEKINYKIREHSLAKVPVIAVVGRKEAETGEVALRY 612 >gi|195472319|ref|XP_002088448.1| Aats-thr [Drosophila yakuba] gi|194174549|gb|EDW88160.1| Aats-thr [Drosophila yakuba] Length = 747 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 84/410 (20%), Positives = 169/410 (41%), Gaps = 44/410 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G + P G + + + ++ E + G E+ P + +A LW+ SG + Y + Sbjct: 361 FHELSPGSCFFQPRGAHIYNTLMSFMKAEYRKRGFQEVISPNIYNAKLWMTSGHWQHYAE 420 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + +S+R LP + R+EL G+ Sbjct: 421 NMFSF-EAEKETFALKPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLT 479 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F TPE K S K + +L + + S + + P + Sbjct: 480 RVRRFQQDDAHIF-CTPEQIK-SEMKGCLEFLHHVYTIFGFSFQLVLSTRP-----DNYL 532 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 L + ++ +F +P + D A Y D+ + D+ Sbjct: 533 GELEQWNAAEKALAESLNEFGMPWKENPGDG------------AFYGPKIDI---TIMDA 577 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVI 329 L + + ++ F +++L ++ DG K V + +G++ + A++ Sbjct: 578 LKRAHQCATIQLD----FQLPIRFNL----SYIADDGEKKRPVIIHRAILGSVERMIAIL 629 Query: 330 ESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYAR--LSKVGCDVFWDDMGE 386 + GK WP ++P ++ ++ + A+DQ + ++++A +S+ CD G+ Sbjct: 630 TENFAGK---WPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHAAGFMSEADCDA-----GD 681 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + + A L F ++VG K S + V ++ R + ++S+ E+I Sbjct: 682 TMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELIT 731 >gi|83282659|ref|XP_729866.1| prolyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL] gi|23488909|gb|EAA21431.1| prolyl-tRNA synthetase, putative [Plasmodium yoelii yoelii] Length = 728 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 78/335 (23%), Positives = 128/335 (38%), Gaps = 69/335 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E +M +F I+S+R+LP Q R E + +R+REFL ++ + T Sbjct: 340 PTSETIMYSVFSKWIRSHRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGH----TA 395 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++ KM L I+ R + + + G + GE F +F Sbjct: 396 HKNEEEAVKMVFDILDIYRRWYEECLAVPVIKG------------IKSEGEK--FGGANF 441 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 S N F I E A AATS Sbjct: 442 T-----STNETF--------ISESGRAIQAATS--------------------------- 461 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 Y GT ++ F+ +V S+G R + +I D KG+I P +VA + Sbjct: 462 HYLGTNFAKMFKIEFEDEQENKQFVHQTSWGC-TTRSIGVMIMMHSDNKGLILPPNVAKY 520 Query: 348 KISLINI--KAHDQV-----CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 K+ ++ I K D+ C+D EK+ +++ C VF D G +F +L G Sbjct: 521 KVVIVPILYKNTDETAIFNYCKDI-EKVLKN-AQINC-VFDDRDLYSPGYKFNHWELRGI 577 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 P+++ VG K + ++ R + ++ E V+ Sbjct: 578 PIRIEVGPKDIQNNSCVFVRRDNNQKFNIKKESVL 612 >gi|229591579|ref|YP_002873698.1| threonyl-tRNA synthetase [Pseudomonas fluorescens SBW25] gi|259516637|sp|C3JZN7|SYT_PSEFS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229363445|emb|CAY50645.1| putative threonyl-tRNA synthetase [Pseudomonas fluorescens SBW25] Length = 640 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 78/196 (39%), Gaps = 9/196 (4%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R + H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLNLFHLQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M N I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTQSENRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F DA+ F T E + + ++ G Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF-CTEEQMQAESAAFIKLTMDVYRDFGFTE 414 Query: 193 IPMRAESGP---IGGD 205 + M+ + P +G D Sbjct: 415 VEMKLSTRPEKRVGSD 430 >gi|289642346|ref|ZP_06474494.1| prolyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] gi|289507878|gb|EFD28829.1| prolyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] Length = 467 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/347 (20%), Positives = 136/347 (39%), Gaps = 69/347 (19%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GKE+ ++ ++ PT E V+ + +SYR+LP Q R ELRPR Sbjct: 96 GKEL-------EEPVVVRPTSETVIGEYMAKWTQSYRDLPLLLNQWANVVRWELRPRL-F 147 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ H +Y R H Sbjct: 148 LRTSEFLWQEGHT--------AHVDQADAAAYARRIH----------------------- 176 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 +V+ ++FM +++L +V + TA ++ L Sbjct: 177 ---------LEVY--REFMT-----------SVLALPVLVGRKTAKERFAGAINTLTLEA 214 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 + + K +++ G ++ F GADG+ H S+G + R++ +I Sbjct: 215 MMGDGK-----ALQMATSHELGQNFARAFDIDFLGADGQRHLAWTTSWG-SSTRMIGGLI 268 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQI 388 + D G+ P +AP ++ ++ ++ D + +I L G V D G Sbjct: 269 MAHGDDNGLRIPPRLAPVQVIVLPVR-DDAALLERVSQITEGLQAAGVRVQLDARPGLSF 327 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + A+L G P++V +G + ++ + + R T + + L++V+ Sbjct: 328 GRRVTDAELKGIPVRVEIGPRDLAAGSITLARRDTSEKITVPLDDVL 374 >gi|300023294|ref|YP_003755905.1| threonyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299525115|gb|ADJ23584.1| threonyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 650 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 5/177 (2%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G W G + A +R +Q R G E++ P + W SG +++YG+ Sbjct: 259 QEEAPGSVFWHAKGWTLFQTLIAYMRRQQQRAGYEEVNSPDMMEKHFWELSGHWENYGEN 318 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +++ P + I+++ +KSYR+LP+ + R E G++R Sbjct: 319 MFTTVLPDERVFCCKPMNCPGHVQIYKNGLKSYRDLPYRIAEFGKVHRYEPSGALHGMLR 378 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R F DA+ F LT + K+ L I+ G + I ++ + P +G D Sbjct: 379 VRHFTQDDAHIF-LTEDQIMEECLKINDLMLSIYKDFGFEEIVIKLSTRPEKRVGAD 434 >gi|220905829|ref|YP_002481140.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7425] gi|219862440|gb|ACL42779.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7425] Length = 610 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 89/414 (21%), Positives = 164/414 (39%), Gaps = 54/414 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +++EQ + G + P + DL+ SG + Y ++M L Sbjct: 224 GLPLWTPKGTILRSTLEDFLKQEQLKRGYQPVVSPHIARVDLFKTSGHWQKYKEDMFPLM 283 Query: 98 DRNDK------AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +++ + P + I++S ++SYR+LP + +R E G+ Sbjct: 284 SEDEQERQSEVGFVMKPMNCPFHIQIYKSELRSYRDLPMRLAEFGTVYRYEQSGELGGLT 343 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE-SGP-----IGG 204 R R F + D++ F +TP + K+ L +F +L LK+ R P IG Sbjct: 344 RVRGFTVDDSHLF-VTPSQLDDEFLKVVDLILSVFAQLQLKNFKARLSFRDPNSDKYIGS 402 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 D + E A + F + D I +++ +W T V Sbjct: 403 DQAWEKAQTAIRQAVETLGMDHFEGIGEAAFYGPKLDFIFQDALEREWQ---LGTVQVDY 459 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 +LPE E+ ++ G++ M H GS R+ Sbjct: 460 -----NLPER-------FELEYVAEDGSRQRPVMI----------HRAPFGSLE----RL 493 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV--CRDACEKIYARLSKVGCDVFWD 382 + +IE + G +W +AP ++ L+ + DQ+ R E++ A +G V D Sbjct: 494 IGILIE-EYAGDFPLW---LAPEQVRLLTV-GDDQMPFARQVAEQMQA----LGVRVVID 544 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G+++ + A+ P+ ++G+K V + I+ R G +S+ EV+ Sbjct: 545 TSGDRLPKKIRNAEKEKIPVMAVIGAKEVEADSLSIRTRAAGELGVISVPEVVE 598 >gi|319760484|ref|YP_004124422.1| threonyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] gi|318039198|gb|ADV33748.1| threonyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] Length = 411 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 85/387 (21%), Positives = 145/387 (37%), Gaps = 44/387 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W G + IR++ + E+ P + +LW ++G +D+Y + + A Sbjct: 31 GMIFWHKNGWIIFQELKKFIRKKLQQYQYQEVKSPIMIDQELWKKTGHWDNYYEHIFITA 90 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 N I P + IF IKSY++LP + R+E G+MR REF Sbjct: 91 SENRTYCI-KPMNCPGHIQIFNYGIKSYKDLPLRIAEFGHCHRNEPSGSLHGLMRIREFT 149 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F + E N ++H G K I ++ + PI Sbjct: 150 QDDAHIF-CSIEQIPTELNYCIKMMYDVYHTFGFKKIIVKLSTRPI-----------KRI 197 Query: 217 GETQVF-CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 GE ++ ++ + + +N +F + Q A Y + L DSL Sbjct: 198 GEDSIWDITEQCLVHILQKKNIEF-------TYQPQDGAFYGPKIEF---ILLDSL---- 243 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY---VQMGSYGIGAMRVVAAVIESS 332 R + G + +SLP K D + Y V + +G++ +I Sbjct: 244 ---KRAWQCGTV---QLDFSLPKLLKAKYIDNNNKYQIPVMIHRAILGSIERFIGLITEE 297 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 + G P +AP +I L+N+ + I RL V D E+IG + Sbjct: 298 YSG---FLPTWLAPTQIVLMNVTDAQSL---YVTNIANRLKFENFRVQIDLRNEKIGCKI 351 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + P +I G+ V + I+ Sbjct: 352 RLHTMHRVPYMIICGNSEVDHGTISIR 378 >gi|167582118|ref|ZP_02374992.1| threonyl-tRNA synthetase [Burkholderia thailandensis TXDOH] Length = 635 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 151/396 (38%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G+ W P G V +R + G +E+ P + LW SG + +Y + Sbjct: 255 IQEEAPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKH--SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ DA+ F + + ++NK+ +S ++ G I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMS---VYEDFGFDRIDIKLSLRPEQRM 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 S E A+ G + +P E A Y + H Sbjct: 428 GSDETWDHAEEGLRNALKACGLEWEELPGEG-----------------AFYGPKIEYH-- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 + D+L + + +++ G +Y + + V + +G+M Sbjct: 469 -IKDALGRSWQCGTLQLDMMLPERLGAEY-------VAEDNSRRRPVMLHRAIVGSMERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H G +W +APF ++NI A Q + + + L K G V D Sbjct: 521 LGILIEHHAGAMPVW---LAPFHAVVLNI-AESQA--EYAQTVVQSLQKQGLRVSADLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P ++VG K V ++ R Sbjct: 575 EKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRAR 610 >gi|284006267|emb|CBA71503.1| threonyl-tRNA synthetase [Arsenophonus nasoniae] Length = 640 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 89/426 (20%), Positives = 160/426 (37%), Gaps = 54/426 (12%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + Y L + + RD +L L + + + G+ W G + IR + N Sbjct: 230 AAYLLRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWVIFRELETFIRTKLNE 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW ++G +++Y + M + N + I P + IF +K Sbjct: 288 YRYQEVKGPLMMDRILWEKTGHWENYKENMFTTSSENREYCI-KPMNCPGHVQIFNQGLK 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F T + Sbjct: 347 SYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIF-CTEDQILTEVKSCIKMIY 405 Query: 183 RIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI-PSENTD 238 ++ G + I ++ + P IG D D E+ + + ++F P E Sbjct: 406 HVYATFGFEKIAVKLSTRPEKRIGTDAQ------WDRAESDLAKALGDIEFDYQPGEGAF 459 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP- 297 + I L+D L R + G + +SLP Sbjct: 460 YGPKIEFT--------------------LYDCLD-------RAWQCGTV---QLDFSLPS 489 Query: 298 -MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + A++ + + V + +G++ ++ + G +P +AP +I +INI Sbjct: 490 RLGASYVDENNERQVPVMIHRAVLGSLERFIGILTEQYAG---FFPTWLAPLQIVIINIT 546 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 D +K+ +LS G V D E+IG + L P ++ G K V ++ Sbjct: 547 DAQA---DFVQKVVKKLSNFGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESNQ 603 Query: 416 VEIKHR 421 V ++ R Sbjct: 604 VSVRTR 609 >gi|153835364|ref|ZP_01988031.1| threonyl-tRNA synthetase [Vibrio harveyi HY01] gi|148868112|gb|EDL67276.1| threonyl-tRNA synthetase [Vibrio harveyi HY01] Length = 642 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 87/422 (20%), Positives = 159/422 (37%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ +R + + G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFVRSKLDEYGYQEVKGPLIMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSEN-REYALKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + N + + Y + G +I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIFCTESQIQEEVTNCIKMVY-DTYQTFGFDNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S + M+ P I E A Y + L Sbjct: 433 ----EIWDQSEEALKQSLESMEIPY--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + L+NI D +++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAILMNITDKQS---DYVQEVVQKLQKSGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++VG + + ++ ++ R +++ I Y S+ Sbjct: 576 NEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISS 635 Query: 445 NR 446 + Sbjct: 636 RK 637 >gi|56696171|ref|YP_166527.1| threonyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] gi|73919826|sp|Q5LTX8|SYT_SILPO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56677908|gb|AAV94574.1| threonyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] Length = 648 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 82/402 (20%), Positives = 144/402 (35%), Gaps = 56/402 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q R G +E++ P + LW SG ++ Y + Sbjct: 260 MQEEAPGQIFWHPNGWTIYTTLQDYMRRQQRRGGYVEVNTPQVVDRKLWEASGHWEKYQE 319 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF +KSYR+LP + R E Sbjct: 320 NMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR-LGLKSIPMRAESGP--- 201 G+MR R F D + F E S F+ +L + ++ LG + ++ P Sbjct: 380 LHGIMRVRGFTQDDGHIF--CAEDQIESETAEFIDFLSMIYKDLGFEKFSVKFSDRPDTR 437 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD---DIISLNSIVEQWTAPYAA 258 G D + A T+ + ++ P E + + + ++I W Sbjct: 438 AGSDAVWDKAEAALLSATRAAGIEPELN---PGEGAFYGPKLEFVLTDAIGRDWQCGTHQ 494 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSY 317 V LPE + AT+ GADG H V + Sbjct: 495 VDFV--------LPER-----------------------LDATYIGADGAKHRPVMLHRA 523 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 +G+ ++ H GK W +AP ++ + +I + D ++ A L G Sbjct: 524 TLGSFERFIGILIEEHAGKLPFW---LAPRQVVVASITSE---ADDYVREVVAELCAAGV 577 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + + P+ + VG + V + V ++ Sbjct: 578 RAEADTRNEKINYKVREHSVGKVPVILAVGHREVEERTVSVR 619 >gi|312984108|ref|ZP_07791455.1| threonine--tRNA ligase [Lactobacillus crispatus CTV-05] gi|310894462|gb|EFQ43537.1| threonine--tRNA ligase [Lactobacillus crispatus CTV-05] Length = 644 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 88/405 (21%), Positives = 160/405 (39%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I + + G + P L + D + SG + Y +M Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALDQVQTEFAKILKLIMDVYKDFDITDYYFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M D + L+ + E A Y D+ + +L + Sbjct: 425 PKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFGL----TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N AH + EK+ L+K G V D+ E++G + Sbjct: 534 KGAFPTW---LAPIQAEIIPVNNDAHGEY----AEKVRQELAKRGFRVEVDNRNEKMGYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G + + + V ++ T SL + IN Sbjct: 587 IRESQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLTDFIN 631 >gi|161503559|ref|YP_001570671.1| threonyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864906|gb|ABX21529.1| hypothetical protein SARI_01637 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 622 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 87/411 (21%), Positives = 153/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 412 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R + + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNEVI 605 >gi|321252491|ref|XP_003192424.1| threonine-tRNA ligase [Cryptococcus gattii WM276] gi|317458892|gb|ADV20637.1| Threonine-tRNA ligase, putative [Cryptococcus gattii WM276] Length = 771 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 3/134 (2%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G +LP+G + + + I+EE + G E+ P + +A+LW SG + +Y ++M + Sbjct: 380 SPGSAFFLPMGMRIYNTLMTFIKEEYFKRGFSEVGSPNIFNANLWKTSGHWQNYAEDMFQ 439 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L D+ + P + IF + +SY+ LP F + + R+E G+ R R Sbjct: 440 LKVDEDQFAL-KPMNCPGHCLIFDARERSYKELPLRFAEFGVLHRNEASGALSGLTRVRR 498 Query: 155 FLMKDAYSFDLTPE 168 F+ DA+ F TP+ Sbjct: 499 FVQDDAHIF-CTPD 511 >gi|258623264|ref|ZP_05718271.1| threonyl-tRNA synthetase [Vibrio mimicus VM573] gi|262173542|ref|ZP_06041219.1| threonyl-tRNA synthetase [Vibrio mimicus MB-451] gi|258584450|gb|EEW09192.1| threonyl-tRNA synthetase [Vibrio mimicus VM573] gi|261890900|gb|EEY36887.1| threonyl-tRNA synthetase [Vibrio mimicus MB-451] Length = 642 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR++ N G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S M+ P I E A Y + L Sbjct: 433 ----EIWDKSEQALIDSLKAMEIPF--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D ++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVVVNITDKQA---DYAHEVAQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 576 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 612 >gi|150007315|ref|YP_001302058.1| threonyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|255014060|ref|ZP_05286186.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_7] gi|256839604|ref|ZP_05545113.1| threonyl-tRNA synthetase [Parabacteroides sp. D13] gi|166225472|sp|A6L9S2|SYT_PARD8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|149935739|gb|ABR42436.1| threonyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|256738534|gb|EEU51859.1| threonyl-tRNA synthetase [Parabacteroides sp. D13] Length = 651 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 89/413 (21%), Positives = 153/413 (37%), Gaps = 63/413 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + +R Q R E+ P + + L++ SG Y YGK+ + Sbjct: 261 KGLPMWLPKGTALRLRLQEFLRRIQARYNYQEVMCPPIGNKLLYITSGHYAKYGKDSFQP 320 Query: 97 ADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ Y P + I+++ +SY++LP + R E G+ R R Sbjct: 321 IHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K + + +F + ++ + I L Sbjct: 381 SFTQDDAHIF-CRPDQVKQEFLNVMDIISIVFKTMNFENFEAQ--------------ISL 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A + EK + E Sbjct: 426 RDKVNREKYIGSD-----------------------ENWEKAEQAIVEACEEKGLKAKIE 462 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP + GAD + H V + Sbjct: 463 YGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPF 522 Query: 320 GAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G+M R VA +IE + GK +W + P ++ ++ I + D +I L Sbjct: 523 GSMERFVAVLIEHTA-GKFPLW---LTPEQVCIMPI---SEKFNDYAWQIARELGNQEIR 575 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 DD E+IG + +L P +IVG K +S+V ++ + G + M + Sbjct: 576 AIVDDRNEKIGRKIRDNELKRIPYMLIVGEKEAENSEVSVRKQGEGDKGSMKI 628 >gi|292655832|ref|YP_003535729.1| threonyl-tRNA synthetase [Haloferax volcanii DS2] gi|291370664|gb|ADE02891.1| threonyl-tRNA synthetase [Haloferax volcanii DS2] Length = 643 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 89/420 (21%), Positives = 164/420 (39%), Gaps = 59/420 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G++ LD + ++ G + P L +LW +SG Y++Y +M L Sbjct: 262 GLPLYQPNGKRILDELADYAKQLNLDAGYDPVETPHLFRTELWKKSGHYENYVDDMF-LL 320 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D ND+ P + IF SYR+LP +++ +R E R G+ R F Sbjct: 321 DVNDEEYGLKPMNCPGHATIFDQQSWSYRDLPVRYFEDGKVYRKEQRGELSGLSRVWSFT 380 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFIVL 213 + D + F + P+ + N + + L +F GL ++ R + +G D + Sbjct: 381 IDDGHLF-VRPDQIEDEINLIIDNILTVFDTFGLDAEVALATRPDKS-VGSD------EI 432 Query: 214 ADTGETQVFCSKD--FMDFPIPSENTDF----DDIISLNSIVEQWTAPYAATSDVHNEKL 267 + ETQ+ D +D+ I + + F D +++ +W P Sbjct: 433 WEQAETQLRAVLDDSGIDYGIEAGDGAFYGPKIDFAFKDALGRKWDGPTVQLD------- 485 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVA 326 F ++ L T+ G D +DH M + G+ Sbjct: 486 --------------------FNMPDRFDL----TYTGEDNEDHQPVMIHRALYGSYERFF 521 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 V+ +GK W +AP ++ ++ I + DQ+ +K+ L+ D+ +D Sbjct: 522 MVLIEHFNGKFPFW---LAPEQVRILPI-SDDQIG--YAKKLQYELNDFRVDI--EDRSW 573 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +G + A P VIVG D + ++ R +D+S+E ++ + R Sbjct: 574 TLGRKIREAQTDRVPYMVIVGGDEEEDGTISVRDRKEREAKDVSVEAFRDHLRSEYDEKR 633 >gi|148643274|ref|YP_001273787.1| threonyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061] gi|166225460|sp|A5UMJ1|SYT_METS3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148552291|gb|ABQ87419.1| threonyl-tRNA synthetase, ThrS [Methanobrevibacter smithii ATCC 35061] Length = 608 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 96/426 (22%), Positives = 160/426 (37%), Gaps = 88/426 (20%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP----------TLQSADLWVESGRYD 87 G W P G+ D + + GA+ + P + +A R D Sbjct: 215 GNLKWFPKGRLVRDLLADYVYNLVVDQGAMPIETPIFYDLDNEAINVHAAKFGERQYRTD 274 Query: 88 SYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQL-KFRDELRPR 146 + MLR A +G VM D F + ++NLP Y++ FR E + Sbjct: 275 TKKNLMLRFA------CCFGAFR--VMADPFIT----WKNLPAKLYELSTYSFRFEKKGE 322 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+ R R F M D +SF + ++K M ++G + D Sbjct: 323 VVGLKRLRAFTMPDFHSFCADMNSTLEEFSK---------------QTDMCIQTG-VDLD 366 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 +++E I A +KDF D EN D W Y+ + Sbjct: 367 VNYEIIFRA---------TKDFYD-----ENKD-------------WM--YSIGKKIGKP 397 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLP-----------MSATFKGADGKDHY-VQ 313 L + LPE K + I+ I Y G P T+ G DGK+HY Sbjct: 398 VLLEILPERKHYWSCKIDFAAIDYLGRPIENPTVQIDVESGKRFDITYLGEDGKEHYPTI 457 Query: 314 MGSYGIGAM-RVVAAVIESSH---DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G++ RV+ +++E + D K + P ++P ++ +I + D +D ++Y Sbjct: 458 LHCSPTGSIERVICSLLEKTAIELDEKAPMLPTWLSPIEVRIITV-GEDH--KDFANELY 514 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +++ V DD E +G + A P +VG + R TG + DM Sbjct: 515 DKINAENIRVDVDDRDESVGKKIRNAATEWIPYIFVVGDNEKESGVFSVTVRETGEKVDM 574 Query: 430 SLEEVI 435 +++E+I Sbjct: 575 TVDELI 580 >gi|51102322|gb|AAT95874.1| prolyl-tRNA synthetase [Naegleria gruberi] Length = 513 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 72/338 (21%), Positives = 127/338 (37%), Gaps = 63/338 (18%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ + PT E +M + IKS+R+LP Q R E + +RSREF ++ Sbjct: 85 DEPIALRPTSETIMYPSYAKWIKSHRDLPLKLNQWTNVVRWEFKHAVPFIRSREFYWQEG 144 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 +S E +K + Y R + + ++P ++ E + Sbjct: 145 HSAFKNFEQAKTEVYDILELYKRTYEEI--LAVP----------------VIKGKKTEAE 186 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F DF T + I N R Sbjct: 187 KFAGADF--------TTTIEAFIPTN--------------------------------GR 206 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ + G +S F+ D K V S+G+ + R + +I D KG++ Sbjct: 207 AVQAATSHHLGQNFSRMFKIEFEAEDKKSKLVYQNSWGL-STRSLGVMIMVHGDDKGMVL 265 Query: 341 PDSVAPFKISLINI--KAHDQVCRDACEK-IYARLSKVGCDVFWDDMGEQI-GSQFAVAD 396 P VA ++ LI + K D + K I+A+L + G + DD E+ G ++ + Sbjct: 266 PPRVAFTQVVLIPLYFKNKDNSELETKSKTIFAQLEENGVRIKLDDRLEKTPGWKYNYWE 325 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L G PL++ +G K + + + R G + + LE++ Sbjct: 326 LRGVPLRIEIGPKDLENGVAMLCRRDNGEKWSVPLEQL 363 >gi|48478436|ref|YP_024142.1| prolyl-tRNA synthetase [Picrophilus torridus DSM 9790] gi|74579482|sp|Q6KZA3|SYP_PICTO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|48431084|gb|AAT43949.1| prolyl-tRNA synthetase [Picrophilus torridus DSM 9790] Length = 466 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 19/211 (9%) Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--------SARGIEVGHIF 288 +++ DI S SI E+ PY ++ +D P K S R +++G I Sbjct: 172 SEYMDIWS--SIAEKLCLPY----NIDMRPDWDKFPGAKYTLAFDTLMPSGRSLQIGTIH 225 Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 +G ++ + +G YV ++G+ R++AAVI D G+I P S+AP + Sbjct: 226 EYGENFARNYDIKYLDINGDLKYVSQTTFGLSE-RLLAAVIGIHGDDTGLILPASIAPVQ 284 Query: 349 ISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVADLLGFPLQVI 405 +I I K+ +V D KI + L + D G ++ ++ G PL++ Sbjct: 285 AIIIPIPGKSFKEVL-DYSGKILSMLKDINVRAEIDSRENYTPGYKYNDWEMRGVPLRIE 343 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +GS+ + S V + RL R ++S++E+ N Sbjct: 344 IGSREMESSTVTVVSRLNKKRLNISIKEINN 374 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 5/131 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS-ADLWVESGRYDSYGKEMLR 95 KG+ WLP G K + ++ IIR+ + E+S P L + + L E + E+ Sbjct: 29 KGMNVWLPYGLKIMRLIDNIIRDNVDNKSFQEVSFPVLITRSQLETEFEHIKGFENEIYW 88 Query: 96 L----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + +++ D + PT E M +F I+S+++LP YQI +R E + +R Sbjct: 89 VTKGGSEKLDIELALRPTSESAMYTMFPLWIRSHQDLPLKIYQIVSVYRYETKHTRSFIR 148 Query: 152 SREFLMKDAYS 162 RE +A++ Sbjct: 149 VREIHFFEAHT 159 >gi|73662391|ref|YP_301172.1| threonyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123761534|sp|Q49YB4|SYT_STAS1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|72494906|dbj|BAE18227.1| threonyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 645 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 90/407 (22%), Positives = 169/407 (41%), Gaps = 45/407 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + + DL+ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVMANVDLYKTSGHWDHYQEDMFPTM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ + M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 KLDEYEEMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ + +++ ++ R LS+ D Sbjct: 382 TLNDAHIF-VRPDQIKEEFKRVVNLIIDVYNDFNFENYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLN---SIVEQWTAPYAATSDVHNEKLFDSLP 272 + + + D M S + D + L+ +I E A Y DV + ++ Sbjct: 427 PEDKEKYFDDDEMWIKAESMLKEAVDELGLDYEEAIGE--AAFYGPKLDVQVQT---AMG 481 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIE 330 + + +S ++ F K+ L T+ G DG+ H + G+ + R VA + E Sbjct: 482 KEETLSTAQLD----FLLPQKFEL----TYIGNDGEQHRPVVIHRGVVSTMERFVAFLTE 533 Query: 331 SSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + KG +P +AP ++ +I N+ H D I L G V DD E++ Sbjct: 534 ET---KG-AFPTWLAPKQVEIIPVNVDLH----YDYARLIQDELKSQGVRVEIDDRNEKM 585 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + A + P Q++VG K V + +V ++ + +E + +E I Sbjct: 586 GYKIREAQMQKIPYQLVVGDKEVENKEVNVRKYGSQDQETLEKDEFI 632 >gi|88859310|ref|ZP_01133950.1| threonyl-tRNA synthetase [Pseudoalteromonas tunicata D2] gi|88818327|gb|EAR28142.1| threonyl-tRNA synthetase [Pseudoalteromonas tunicata D2] Length = 636 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 86/404 (21%), Positives = 142/404 (35%), Gaps = 64/404 (15%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W G + +RE+ E+ P + LW +SG +D Y Sbjct: 257 QEEAPGMVFWHNDGWSIYRELEDFVREKLREYKYEEVKGPLMMDRSLWEKSGHWDKYADA 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + I P + IF +KSYR+LP + R+E G+MR Sbjct: 317 MFTTVSEKREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALHGLMR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F T E + + G + I ++ + P Sbjct: 376 VRGFTQDDAHIF-CTEEQVMDEVSACIKMVYDTYETFGFEKIVVKLSTRP---------- 424 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD--VHNEKLFD 269 EN DD W A ++ HN FD Sbjct: 425 -----------------------ENRIGDDAT--------WDQSEKALAEALTHNGIEFD 453 Query: 270 SLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYG 318 LP IE + + GT ++LP + AT+ + + M Sbjct: 454 YLPGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFALPGRLGATYVAENNERRTPVMIHRA 513 Query: 319 I-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 I G++ ++ + G ++P +AP ++ ++NI D C I +L+K+G Sbjct: 514 ILGSIERFIGILTEEYAG---LFPTWLAPKQVVVMNITDKQA---DYCHNIVEKLNKLGF 567 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + L P ++VG K V +V ++ R Sbjct: 568 RACADLRNEKIGFKIREHTLKRIPYLLVVGDKEVEQEEVAVRTR 611 >gi|312794079|ref|YP_004027002.1| threonyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181219|gb|ADQ41389.1| threonyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 647 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 83/410 (20%), Positives = 165/410 (40%), Gaps = 50/410 (12%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G K L + + +E+ + G + P + +DL+ SG +D Y M + Sbjct: 264 QGLPLLMPKGAKILQILQRFVEDEEEKRGYLLTKTPYMAKSDLYKISGHWDHYRDGMFVI 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P I+ S +SYR+LP + + FR+E G++R R+F Sbjct: 324 EEDENEVLALRPMTCPFQFLIYNSKQRSYRDLPIRYSETSTLFRNESSGEMHGLIRVRQF 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ P+ + + + I LG+++ D+ + F Sbjct: 384 TLSDAHII-CRPDQVEEEFKGVLDLIQYIMKTLGIEN------------DIWYRFSRWDP 430 Query: 216 TGETQVFCSKDFMDFPIPSENTDFD-----DIISLNSIVEQWTAP-YAATSDVHNEKLF- 268 + + ++D P E T+ D D + +N + A Y D+ + ++ Sbjct: 431 NNKEK------YIDNPEAWEKTENDMKNILDKLGINYKEAKGEAAFYGPKLDIQFKNVYG 484 Query: 269 --DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVV 325 D++ I V F ++ + T+ DG K + + IG Sbjct: 485 KEDTI----------ITVQIDFALAERFDM----TYVDRDGQKKRPIIIHRSSIGCYERT 530 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A++ ++G +W ++P +I +I + + + + + L + G V D Sbjct: 531 LAMLIEKYNGAFPLW---LSPVQIRVIPVSDN---FNEYAKNVARILKENGFRVEEDYRS 584 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E +G + A L P VIVG K ++ V ++ R G ++E+ I Sbjct: 585 ETVGYKIRDAQLQKIPYMVIVGEKEQKENTVAVRDRKKGDLGSFTIEDFI 634 >gi|307564422|ref|ZP_07626963.1| threonine--tRNA ligase [Prevotella amnii CRIS 21A-A] gi|307346782|gb|EFN92078.1| threonine--tRNA ligase [Prevotella amnii CRIS 21A-A] Length = 650 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 85/418 (20%), Positives = 149/418 (35%), Gaps = 65/418 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 KG+ WLP G + + ++R+ E+ P + S +L++ SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTQLRLRLQDMLRKLLKPYNYQEVITPGIGSKNLYITSGHYAHYGKDAFQP 322 Query: 96 -LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + +++ +SY++LP + FR E G+ R R Sbjct: 323 IQTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + P+ K + L++F G ++ + I L Sbjct: 383 NFTQDDAHIF-VRPDQVKAEFENNIDIILKVFKTFGFENYEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A EK + E Sbjct: 428 RDPEDKDKYIGDD-----------------------EVWNESEQAIKQACKEKGLKATVE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLPMS--ATFKGADG-KDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 LGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFHLEYTAEDNTKKTPVMIHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ AV+ G +W PD VA +S + D K+ +L Sbjct: 525 GSLERFTAVLIEHTAGHFPLWLTPDQVAILPVS--------EKYNDYARKVKQQLDASDV 576 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E++G + +L P V+VG K ++ V ++ + G + M ++ I Sbjct: 577 RALIDDRNEKVGRKIRDNELKRIPYMVVVGEKEAAEGLVAMRKQGGGEQSTMPVKAFI 634 >gi|296114661|ref|ZP_06833313.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295978757|gb|EFG85483.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 603 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 6/174 (3%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G W P G + A +R Q +E++ P + LW SG ++ +G+ M Sbjct: 221 APGAVFWHPNGWTLFQTLLAYLRARQQAENYVEINTPDIMDLSLWQASGHWEKFGENMF- 279 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + P + +FR +KSYR+LP + R E G+MR R Sbjct: 280 TTETEGRTYALKPMNCPGGVQVFRHGLKSYRDLPLRMAEFGKVHRFEPSGALHGLMRVRA 339 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 F DA+ F TPE + ++ L I+ G + ++ P +G D Sbjct: 340 FTQDDAHIF-CTPEQMEAETQRICHLVLSIYKDFGFDDVRIKFSDRPEKRVGSD 392 >gi|331703337|ref|YP_004400024.1| Proline tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801892|emb|CBW54045.1| Proline tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 474 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 80/392 (20%), Positives = 156/392 (39%), Gaps = 73/392 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG + P G + + + + EE + + P L L+ E + + E+ Sbjct: 35 KGTMIFRPYGYRIWELIQKYLDEEFKKINVDNVYFPLLIPESLFNKEKDHIEGFSPEIAT 94 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + +K + PT E VM D F + I SYR+LP + Q +++ RP Sbjct: 95 VTKVGEKQLEENLFIRPTSEVVMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTTRP---F 151 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R+ EFL ++ ++ SYN+ L+I + I + E Sbjct: 152 LRTSEFLWQEGHTV-------HSSYNEAEDFCLKILN---------------IYEKFAKE 189 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 ++L V C K +E F A D + Sbjct: 190 ILLLP------VICGK-------KTEKEKF-----------------AGAKDTYT----- 214 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 E+ + ++ G +F ++ F+ + K + S+G+ + R++ A+I Sbjct: 215 --IESLMFDGQALQCGTSHFFADNFTKVYDIKFQNKENKLEHAYSTSWGV-STRLIGALI 271 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + D G++ P ++P +I +I IK +Q+ E I +LS DV D+ + G Sbjct: 272 MTHSDDNGLVLPSKISPIQIQIIQIKNTEQI-DQVVEIIKDKLSDYRIDV--DNSDKSFG 328 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + A++ G P+++ +G + + ++++ I R Sbjct: 329 FKISEAEIKGIPIRIEIGPRDLENNQITISRR 360 >gi|163840211|ref|YP_001624616.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] gi|162953687|gb|ABY23202.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] Length = 453 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 89/414 (21%), Positives = 161/414 (38%), Gaps = 40/414 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + EE R+G + P L +L+ SGR+ + ++M Sbjct: 72 GLPLWLPDGAVIRTELEKLAVEESLRSGYQRVYSPVLAKRELYERSGRWAKFSEDMFPPL 131 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ ++ P + +F + S+R LP + ++ FR EL G+ R R+ Sbjct: 132 RIGNEELVLRPANCPHHAMLFAARPHSWRELPIRYAELGSMFRSELSGVLSGLSRVRQIN 191 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 + D + F TPE ++ + + + LGL+ R + G + A Sbjct: 192 LDDCHVF-CTPEQAQSEVVRGIQAISAGYSILGLEPDYFRLSARDSGTSFAGSASDWA-A 249 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 E+ + + D + P V A Y DV + FD+ + + Sbjct: 250 AESVLKAALDELGLPY--------------RRVAGEAAFYGPKIDV---QFFDAAGKEET 292 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDG 335 +S ++ F ++ L + G DG H M G+ GAM A++ H G Sbjct: 293 LSTVQLD----FVQPERFDL----AYIGDDGAAHRPMMVHRGLFGAMERTVALLIEKHQG 344 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 K W +AP +++++ + + Q R C +I A+ G V D G +GS+ Sbjct: 345 KMPPW---LAPVQLAVLPV-SDTQAAR--CAEISAQALAAGIRVIVDHDG-SVGSRVRKT 397 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR--EDMSLEEVINYASHRFSNNRP 447 +VGS+ K+ + + G R + + + E I + P Sbjct: 398 SQRRVSWLAVVGSQESESGKLSLS--IPGARPAQLLPVTEAIELMRQKIQRREP 449 >gi|170575688|ref|XP_001893343.1| threonyl-tRNA synthetase, cytoplasmic [Brugia malayi] gi|158600735|gb|EDP37841.1| threonyl-tRNA synthetase, cytoplasmic, putative [Brugia malayi] Length = 685 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 81/420 (19%), Positives = 164/420 (39%), Gaps = 45/420 (10%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G W P G + + IR+E + G E+ P + ++ LW +SG ++ Y Sbjct: 293 FFHPLSPGSAFWYPKGAHIYNTLCNFIRKEYRKRGFTEVISPNMYNSKLWEQSGHWEHYS 352 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M ++ D + P + ++ +++ LP + + R+E+ G+ Sbjct: 353 DNMFKI-DIEKETFGLKPMNCPGHCLMYSHMPRTHNELPLRYADFGVLHRNEMSGALTGL 411 Query: 150 MRSREFLMKDAYSF---DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 R R F DA+ F D E + + +YL +F ++ R E G +G Sbjct: 412 TRVRRFQQDDAHIFCRQDQVVEEIMGCIDFLKYAYLDVFGFTFKLNLSTRPEVGYLGD-- 469 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII-SLNSIVEQWTAPYAATSDVHNE 265 I + N D + +LN+ +W + Sbjct: 470 -------------------------IETWNAAEDKLREALNASGHKWELN-PGDGAFYGP 503 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 K+ ++ + R + + F ++ L + F + + V + +G++ + Sbjct: 504 KIDITIQDALRRLHQCATIQLDFQLPVRFDL---SYFDENNERQRPVMIHRALLGSIERM 560 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 A++ ++ GK WP ++P + +I + ++ + R ++IY +V DV D Sbjct: 561 TAILAENYGGK---WPFWLSPRQAKVITVHESQNDYGRKVQQEIYEAGFEVEFDV---DS 614 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + + Q A + F ++VG + V ++ R +R ++ LE++I RF N Sbjct: 615 SDTLNKQIRNAQIAQFNFILVVGPAEARNGTVNVRTRDNAVRGEVKLEDLIE-KFKRFQN 673 >gi|94971761|ref|YP_593809.1| threonyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] gi|94553811|gb|ABF43735.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] Length = 659 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 93/463 (20%), Positives = 164/463 (35%), Gaps = 66/463 (14%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +YF + + RD + +L L + + G+ W P G + +REE + Sbjct: 244 EYFAKLEEAKKRDHRVLGKQLDLFS-IQELAGPGLIFWHPKGGIIRKEMEDWMREEYLKR 302 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + DLW SG Y + + +D + P + I+R ++S Sbjct: 303 GYSLVVTPHVARTDLWKISGHTGYYKQNFFTPMELDDAEYMLKPMNCPGHVLIYRDQLRS 362 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVM----RSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 YR+LP ++ +R E R GVM R R F DA+ F TP + + Sbjct: 363 YRDLPMRLGEMGTVYRYE---RSGVMHGLLRVRGFTQDDAHIF-CTPSQIEDEISGCIDF 418 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + H G F +F + D + Sbjct: 419 AISVLHTYG-------------------------------------FNEFKVELSEWDPN 441 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEK--LFDSLPENKRVSARGIEV------GHIFYFGT 292 D S EQW + V + + + S+P I+V G ++ T Sbjct: 442 DRKSFIGTDEQWNLAQGSLKKVLDARGIPYKSMPGEAAFYGPKIDVKLVDAIGRLWQLST 501 Query: 293 ---KYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAP 346 ++LP + G DGK H M + G++ V+ + G +W ++P Sbjct: 502 VQFDFTLPQRFELEYVGEDGKRHQPLMVHRALYGSIERFFGVLIEHYAGAFPVW---LSP 558 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 + L+ I + + K+ L G V D E++ ++ L P ++V Sbjct: 559 VQTVLVPI---GEKHLEYANKVGDVLKAKGIRVEVDGRNEKMNAKIREHALQKVPFILVV 615 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 G K + V ++ R E + L+ + + +P L Sbjct: 616 GDKEAEATSVNVRTRGKDKTETVPLDSFVERIEKLIAEKKPTL 658 >gi|332292776|ref|YP_004431385.1| prolyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5] gi|332170862|gb|AEE20117.1| prolyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5] Length = 492 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F GK +V S+G+ + R++ A+I + D +G+ Sbjct: 234 GKALQAGTSHFLGQNFAKAFDVKFTTNQGKQEHVWATSWGV-STRLMGALIMTHSDDQGL 292 Query: 339 IWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P ++APF++ ++ I K +Q+ +I L G V +D+ + G +F Sbjct: 293 VLPPNLAPFQVVIVPIYKGQEQLDAISQVANEIVQDLKLHGVSVKFDNRDTHKPGWKFNE 352 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G PL++ +G K + VE+ R T +E ++ E ++ Sbjct: 353 YELKGVPLRIGIGPKDLEKRTVELARRDTLTKEFVAKENIV 393 Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + ++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 116 EEELIVRPTSEAIIWNTYKGWIQSYRDLPLLINQWANVVRWEMRTRL-FLRTAEFLWQEG 174 Query: 161 YSFDLTPE 168 ++ T + Sbjct: 175 HTAHATKQ 182 >gi|187929057|ref|YP_001899544.1| threonyl-tRNA synthetase [Ralstonia pickettii 12J] gi|238691850|sp|B2UGJ8|SYT_RALPJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|187725947|gb|ACD27112.1| threonyl-tRNA synthetase [Ralstonia pickettii 12J] Length = 635 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 84/401 (20%), Positives = 151/401 (37%), Gaps = 56/401 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I ++S G W P G + +R G E+ P + LW ++G +D Y + Sbjct: 255 IDEYSPGTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQILDKTLWEKTGHWDKYRE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + + P + I++ IKSYR+LP F + R+E G+M Sbjct: 315 NMF-ITESEKREYALKPMNCPGHILIYKQGIKSYRDLPLRFGEFGACHRNEPSGGLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGDL 206 R R F D + F E + F + L +++ G I + + P IG + Sbjct: 374 RVRGFTQDDGHIF--CTEDMIQAEVTAFTTLLQKVYKDFGFTEILYKLSTRPDKRIGTEE 431 Query: 207 SHEFIVLA-DTGETQVFCSKDFMDFPIPSENTDFDDIISL---NSIVEQWTAPYAATSDV 262 S + A G C +++ P E + I +++ QW T V Sbjct: 432 SWDRAEAALAEGLRASGCEFEYL----PGEGAFYGPKIEYVLKDALGRQWQ---CGTIQV 484 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGA 321 +LPE + A F G DG H + + +G+ Sbjct: 485 DP-----NLPER-----------------------LDAEFVGEDGARHRPIMLHRAIVGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVF 380 + ++ + G W ++P ++ +++I +H + + + L K G Sbjct: 517 LERFIGILIEQYAGALPTW---LSPVQVVVLSITDSHAEYAQSVAQS----LQKQGFRAV 569 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + + P QV+VG K +++V ++ R Sbjct: 570 VDLRNEKIGYKIREHSVQKVPYQVVVGDKERDENQVAVRAR 610 >gi|94986656|ref|YP_594589.1| threonyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] gi|122988800|sp|Q1MRV8|SYT_LAWIP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|94730905|emb|CAJ54268.1| Threonyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] Length = 642 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 83/413 (20%), Positives = 169/413 (40%), Gaps = 60/413 (14%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G + +R+E + G + P L +LW +SG Y +Y + M Sbjct: 257 APGMVFWQPNGMLLRTILEDFLRKEHLKRGYQLVQGPQLLRRELWEKSGHYTNYKENMYF 316 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 D +YG P + ++++H+ SYR LP ++++ + R E G++R Sbjct: 317 TEIEED---VYGIKPMNCVSHMLLYKTHLHSYRELPQRYFELGVVHRHEKSGVLHGLLRV 373 Query: 153 REFLMKDAYSFDLTPEGSKH-----SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 R+F DA+ + + + ++ + +S + + + + P ++ IG D + Sbjct: 374 RQFTQDDAHIICMPEQLEEEIIQVITFVRDLMSLFDFNYHIVISTRPEKS----IGSDYA 429 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E LA + Q + + ++ P + D A Y D+ K+ Sbjct: 430 WE---LATSALIQ---AVEKINLPYSINHGD--------------GAFYGPKIDI---KV 466 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D++ ++S ++LP + G DGK H M I G++ Sbjct: 467 TDAIGREWQLST----------IQCDFTLPERFELEYVGQDGKRHQPVMIHRAIFGSIER 516 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P + P ++ ++ + + +Y++L VG V D Sbjct: 517 FIGILTEHYAGA---FPTWLTPIQVKILTVT---DAQTPFAKHVYSQLQDVGIRVGLDIR 570 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 E++G + A L P +++G K + V ++ R TG E++ ++ V + Sbjct: 571 NEKLGFKIREAQLAKIPYILVIGQKELELESVNVRLR-TG--ENIGMQSVTEF 620 >gi|50952758|gb|AAT90291.1| putative threonyl-tRNA synthetase [uncultured proteobacterium eBACred25D05] Length = 650 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 83/400 (20%), Positives = 145/400 (36%), Gaps = 52/400 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G K + +R +Q G +E++ P + LW ESG +D Y + Sbjct: 260 MQEEAPGQIFWHPNGWKIYTLLQDYMRRQQEVGGYVEVNTPQVVDRKLWEESGHWDKYQE 319 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + ++ IKSYR+LP + R E Sbjct: 320 HMFIVEVDEEHAREKSINALKPMNCPCHVQVYNQGIKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGG 204 G+MR R F DA+ F E S K F+++L ++ LG ++ P Sbjct: 380 LHGIMRVRGFTQDDAHIF--CQEDQIESETKKFINFLSGVYKDLGFPKFAVKFSDRPKNR 437 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPI-PSENTDFD---DIISLNSIVEQWTAPYAATS 260 S + A+ S F DF + P E + + + ++I W Sbjct: 438 AGSDDVWDKAEGALKSATTSAGF-DFELNPGEGAFYGPKLEFVLTDAIGRDWQCGTLQVD 496 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGI 319 V LP+ + A F G DG+ H V + + Sbjct: 497 FV--------LPDR-----------------------LDANFIGEDGQKHRPVMLHRAVL 525 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G+ ++ + G+ W +AP ++ + +I + C +I L VG Sbjct: 526 GSFERFIGILIENFAGRLPFW---LAPRQVVVASIVTD---ANEYCTEIVDALKLVGIRA 579 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + + P + +G++ V D + ++ Sbjct: 580 ESDLRNEKISYKVREHSVAKVPTILAIGNREVEDRAITVR 619 >gi|82524022|emb|CAI78700.1| Threonyl-tRNA synthetase [uncultured Flavobacteriaceae bacterium] Length = 644 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 85/397 (21%), Positives = 157/397 (39%), Gaps = 53/397 (13%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 +G+ WLP G + + +++ Q + G + P + +L+V SG Y YG + + Sbjct: 259 QGLPLWLPKGAALRERLEDFLKKAQKKAGYEMVVTPHIGQKELYVTSGHYAKYGADSFQP 318 Query: 96 -LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + D+ + P + +I+ + SY++LP + + +R E G+ R R Sbjct: 319 IKTPKEDEEFLLKPMNCPHHCEIYNNSQWSYKDLPKRYAEFGTVYRYEQSGELHGLTRVR 378 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS----IPMRAESGP---IGGDL 206 F DA+ F + PE + + L +F LG ++ + +R P IG Sbjct: 379 GFTQDDAHLFCM-PEQLDQEFKNVIDLVLYVFGSLGFENFTAQVSVRDPENPDKYIG--- 434 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E + + +KD + DF IVE A Y D Sbjct: 435 --EVENWEKAEQAIINAAKD--------KGLDF-------VIVEGEAAFYGPKLDFM--- 474 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMR 323 + D+L R ++G I Y+LP T+KG+D + H V + G++ Sbjct: 475 VKDAL-------GRKWQLGTI---QVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSIE 524 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 A++ G +W + P + ++ I + EK+ L D+ Sbjct: 525 RFIAILLEHTAGNFPLW---LMPKQAIILCI---SEKYEKYAEKVLNLLENNEIRALVDN 578 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 E IG + A++ +P +I+G S++K+ ++ Sbjct: 579 RNETIGKKIREAEMQKYPYMIIIGENEESENKISVRQ 615 >gi|317487453|ref|ZP_07946240.1| threonyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] gi|316921312|gb|EFV42611.1| threonyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] Length = 646 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 90/412 (21%), Positives = 162/412 (39%), Gaps = 61/412 (14%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ WLP G + +R E + G + P + +LW +SG Y +Y + M Sbjct: 261 AAGMVFWLPKGMLLRTILEDFLRREHIKRGYQLVQGPQVLRRELWEQSGHYANYRENMYF 320 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 D +YG P + I+ +H++SYR LP ++++ + R E G++R Sbjct: 321 TEIEGD---MYGIKPMNCVSHMLIYNAHLRSYRELPQRYFELGVVHRHEKSGVLHGLLRV 377 Query: 153 REFLMKDAYSFDLTPEGSKH------SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 R+F DA+ PE + + + ++ +R+ + + P +A IG D Sbjct: 378 RQFTQDDAHII-CAPEQLEDEIIGVIALVRDLMALFGFQYRVVISTKPAKA----IGSDE 432 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + E A + + + + I + + F Y DV K Sbjct: 433 AWELATNALIKAVE----RANLSYTINAGDGAF----------------YGPKIDV---K 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 + D++ ++S ++LP + G DG+ H M I G++ Sbjct: 470 VTDAIGREWQLST----------IQCDFTLPERFELEYVGQDGERHRPVMVHRAILGSLE 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWD 382 V+ + G +P +AP + ++ + A + +ACE L K G D Sbjct: 520 RFIGVLTEHYAGA---FPTWLAPVQAKILTVTDAQNAFAEEACEA----LRKQGIRAEVD 572 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 E++G + A L P ++VG K V V ++ R SL+EV Sbjct: 573 TRNEKLGFKVREAQLAKIPYILVVGDKEVEARSVNVRLRTGENLGVKSLDEV 624 >gi|237744663|ref|ZP_04575144.1| threonyl-tRNA synthetase [Fusobacterium sp. 7_1] gi|229431892|gb|EEO42104.1| threonyl-tRNA synthetase [Fusobacterium sp. 7_1] Length = 637 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 89/433 (20%), Positives = 177/433 (40%), Gaps = 52/433 (12%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + L + ++ G +LP G + + + R+E + +++ P Sbjct: 236 EAEKRDHRKLGKELELFFLSEYGPGFPFFLPKGMIVRNVLVDLWRKEHEKAEYLQLETPI 295 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + + +LW SG + +Y +E + ++ ++ P + F+ + SY++LP Sbjct: 296 MLNKELWEISGHWFNY-RENMYTSEIDEVEFAIKPMNCPGGVLAFKHQLHSYKDLPARLA 354 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ R E G+MR R F D++ F +TPE + +G+ + Sbjct: 355 ELGKVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPEQVQDEI-------------IGVVN 400 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 + + S G E+ + T + S++ D + D + I Sbjct: 401 LIDKFYSKLFG----FEYEIELSTKPEKAIGSQEIWDMAESALAGALDKLGRKYKINPGD 456 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG 307 A Y D K+ D+ +G ++ GT ++LP T+ G DG Sbjct: 457 GAFYGPKLDF---KIKDA-------------IGRMWQCGTIQLDFNLPERFDVTYIGEDG 500 Query: 308 KDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + H V + G++ ++ + G +W +AP ++ ++ I + C + Sbjct: 501 EKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMW---LAPVQVKVMTI---NDECVPYAK 554 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +I A+L ++G DD E IG + A+ P+Q+I+G V + +V I+ + Sbjct: 555 EIMAKLDELGIRAELDDRTETIGYKIREANGRYRIPMQLIIGKNEVENKEVNIRRFGSKD 614 Query: 426 REDMSLEEVINYA 438 + SL+E NY Sbjct: 615 QFSKSLDEFYNYV 627 >gi|163755863|ref|ZP_02162980.1| prolyl-tRNA synthetase [Kordia algicida OT-1] gi|161324034|gb|EDP95366.1| prolyl-tRNA synthetase [Kordia algicida OT-1] Length = 492 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 73/354 (20%), Positives = 150/354 (42%), Gaps = 67/354 (18%) Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D GK M+ + ++ +I PT E ++ + +++ I+SYR+LP Q R E Sbjct: 102 DKEGKLMVDPNAKLEEELIVRPTSEAIIWNTYKNWIQSYRDLPILINQWANVVRWE---- 157 Query: 147 FGVMRSREFLMKDAYSFDLTPEG-SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 MR+R FL + L EG + H+ V+ +S+ M+ Sbjct: 158 ---MRTRLFLRTAEF---LWQEGHTAHATKDEAVA----------ESLQMQK-------- 193 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 V A+ E DFM P+ + + E+ +A D + Sbjct: 194 ------VYAEFAE-------DFMAMPV---------VKGAKTESER----FAGALDTYT- 226 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 ++L ++ + ++ G + G ++ + +GK V S+G+ + R++ Sbjct: 227 --IEALMQD----GKALQAGTSHFLGQNFAEAFDVKYATKEGKQELVWATSWGV-STRLM 279 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWD 382 +I + D G++ P +AP ++ + I +++ +K I L G + +D Sbjct: 280 GGLIMTHSDDAGLVLPPKLAPIQVVFVPIYKNEEQFEAIAKKVTEISNELKAKGVSIKFD 339 Query: 383 DMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + G++FA +L G PL++ +G++ + + +EI R T ++ ++ E+ + Sbjct: 340 KRDTLRPGAKFAEWELKGVPLRIALGARDLENGTLEIARRDTFEKQSVAQEDAV 393 >gi|242239483|ref|YP_002987664.1| threonyl-tRNA synthetase [Dickeya dadantii Ech703] gi|242131540|gb|ACS85842.1| threonyl-tRNA synthetase [Dickeya dadantii Ech703] Length = 642 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 88/415 (21%), Positives = 152/415 (36%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRTEVNSCIKMVYDMYGTFGFEKIAVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 + D E + + P P E + I Sbjct: 432 ----EMWDRAEEDLAAALTENGIPFEYQPGEGAFYGPKIEFT------------------ 469 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 L D L R + G + +SLP ++A++ G + + M I G+ Sbjct: 470 --LHDCLD-------RAWQCGTV---QLDFSLPGRLNASYVGENNERQVPVMIHRAILGS 517 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 M ++ G +P +AP ++ ++NI D ++ +L G V Sbjct: 518 MERFIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---DYVSELTRKLQDAGIRVKA 571 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P ++ G K V KV ++ R + + EVIN Sbjct: 572 DLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSIDVSEVIN 626 >gi|91787975|ref|YP_548927.1| threonyl-tRNA synthetase [Polaromonas sp. JS666] gi|123059945|sp|Q12BR3|SYT_POLSJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91697200|gb|ABE44029.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Polaromonas sp. JS666] Length = 635 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 89/391 (22%), Positives = 145/391 (37%), Gaps = 60/391 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I H+ G+ W P G V +R+ G E+ P + LW ++G +D Y Sbjct: 255 IDDHAPGLVFWHPKGWTIWQGVEQYMRKVYQDNGYQEVKGPQVIDKTLWEKTGHWDKYRD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF+ IKSYR+LP + + R+E G+M Sbjct: 315 NMF-TTESEKREYALKPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPSGGLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGDL 206 R R F D + F + K + + + L +++ G K+I + + P IG D Sbjct: 374 RVRGFTQDDGHIFCTEEQILKECVD--YTTLLQKVYTDFGFKNIIYKVATRPDARIGSDE 431 Query: 207 SHEFIVLADTGETQVFCS--KDFMDFPI-PSENTDFDDIISL---NSIVEQWTAPYAATS 260 S D E + S +F I P E + I ++I QW T Sbjct: 432 SW------DKAEQALIESLRASGCEFEISPGEGAFYGPKIEYTLKDAIGRQWQ---CGTM 482 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGI 319 V S+PE + A + G DG H V + + Sbjct: 483 QVDF-----SMPER-----------------------LDAEYVGEDGARHRPVMLHRAIV 514 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCD 378 G++ ++ H G W +AP ++S++NI + + R+ + L G Sbjct: 515 GSLERFIGILIEEHAGALPTW---LAPIQVSVLNITDSQAEYAREVAKT----LQNQGLR 567 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 V D E+I + L P ++VG K Sbjct: 568 VNLDLRNEKITYKIREHSLQKLPYILVVGDK 598 >gi|67920215|ref|ZP_00513735.1| Threonyl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501] gi|67857699|gb|EAM52938.1| Threonyl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501] Length = 642 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 85/401 (21%), Positives = 153/401 (38%), Gaps = 41/401 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G K + R+ G + P + + DLW SG +D Y + M Sbjct: 265 GLVFWHPRGAKMRYVIEDYWRKAHLDGGYELLYTPHVANLDLWKTSGHFDFYRENMFDSM 324 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++A P + +++ + SYR P + ++ +R E G+MR R F Sbjct: 325 KIEEQAYQIKPMNCPFHVLTYKNELHSYREFPLRWAELGTVYRYERSGVLHGLMRVRGFT 384 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F L + + + ++ +I G K + + P + E LA Sbjct: 385 QDDAHVFCLPTQIASEILGVLNLTE-KILSDFGFKDYEVNLSTRPDKSVGTDEGWELATQ 443 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + K + D+ F Y D+ K+ D++ + Sbjct: 444 ALVEALNGKGW-DYIEDKGGGAF----------------YGPKIDI---KIKDAIGRTWQ 483 Query: 277 VSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 S ++ ++LP + DG M I G++ ++ ++ Sbjct: 484 CSTIQVD----------FNLPERFDMEYVAVDGSRQRPIMIHRAIFGSLERFYGILIENY 533 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G +W +AP ++ L+ + + Q+ + E + A L + G V D GE++G Q Sbjct: 534 AGDFPLW---LAPIQLRLLPV-SEAQI--EYGETVVATLKQAGYRVEIDCTGERLGKQIR 587 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 A+L P+ IVG K V + I+ R G M+L E+ Sbjct: 588 NAELEKIPVVAIVGKKEVETQTLSIRTRQQGDIGTMTLTEL 628 >gi|238027731|ref|YP_002911962.1| threonyl-tRNA synthetase [Burkholderia glumae BGR1] gi|237876925|gb|ACR29258.1| Threonyl-tRNA synthetase [Burkholderia glumae BGR1] Length = 635 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 91/424 (21%), Positives = 162/424 (38%), Gaps = 53/424 (12%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + + H + S G+ W P G V +R N Sbjct: 231 YLHMLEE----AEKRDHRKLAKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAM--IYGPTHEEVMTDIFRS 120 G +E+ P + LW SG + +Y + M +++ D A+ + P H +F Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGH----VQVFNH 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE--GSKHSYNKM 177 ++SYR+LP + + R+E G+MR R F+ DA+ F + ++N++ Sbjct: 343 GLRSYRDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFIAESIAFNEL 402 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +S ++ G I ++ P + E A+ G + +P E Sbjct: 403 AMS---VYKDFGFDQISIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLAWEELPGEG- 458 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 A Y + H + D+L + + +++ G +Y Sbjct: 459 ----------------AFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLGAEY--- 496 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +G+ V + +G+M ++ H G W +AP + ++NI A Sbjct: 497 ----VAEDNGRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAW---LAPVQAIVMNI-AE 548 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 +Q D + L K G V D E+I + L P ++VG K V Sbjct: 549 NQA--DYAGSLAQSLQKQGLRVEADLRNEKISYKIREHALEKVPYLLVVGDKEREAQTVA 606 Query: 418 IKHR 421 ++ R Sbjct: 607 VRAR 610 >gi|82751271|ref|YP_417012.1| threonyl-tRNA synthetase [Staphylococcus aureus RF122] gi|123768508|sp|Q2YTA7|SYT_STAAB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|82656802|emb|CAI81231.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus RF122] Length = 645 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 85/404 (21%), Positives = 168/404 (41%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ ++M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 QLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ + ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + + + D D +EN + L E+ A + ++ ++ + + Sbjct: 427 PEDKEKYFDDD--DMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEE 484 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSH 333 +S ++ F ++ L T+ G DG+ H + G+ + R VA + E + Sbjct: 485 TLSTAQLD----FLLPERFDL----TYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEET- 535 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 KG +P +AP ++ +I N+ H D ++ L G V DD E++G + Sbjct: 536 --KG-AFPTWLAPKQVQIIPVNVDLH----YDYARQLQDELKSQGVRVSIDDRNEKMGYK 588 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 589 IREAQMQKTPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFI 632 >gi|299140628|ref|ZP_07033766.1| threonine--tRNA ligase [Prevotella oris C735] gi|298577594|gb|EFI49462.1| threonine--tRNA ligase [Prevotella oris C735] Length = 649 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 91/421 (21%), Positives = 150/421 (35%), Gaps = 69/421 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R E+ P + L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTQLRLRLQELLRSLLRPYNYQEVITPGIGGKSLYVTSGHYAHYGKDAFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + +++ +SY++LP + FR E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEVYARKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + P+ K + L++F + + I L Sbjct: 383 TFTQDDAHIF-VRPDQVKAEFETNIDIILKVFKTFQFDNYEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D E W A + EK + E Sbjct: 428 RDPKDKEKYIGSD-----------------------EIWEESQNAIREACKEKGLVAREE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLPMSATFK-----GADGKDHYVQMGSY 317 + G + +G + GT Y+LP A FK + K V + Sbjct: 465 IGEAAFYGPKLDFMVKDAIGRKWQLGTIQVDYNLP--ARFKLEYTAEDNTKKTPVMIHRA 522 Query: 318 GIGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 G++ AV+ G +W PD VA IS + D +++ V Sbjct: 523 PFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYAKQVSKYFDSV 574 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DD E+IG + +L P VIVG K ++ V ++ + G + M +EE Sbjct: 575 GVRAVIDDRNEKIGRKIRDNELKRIPYMVIVGEKEAAEGLVSMRKQGGGEQATMKMEEFA 634 Query: 436 N 436 N Sbjct: 635 N 635 >gi|281423114|ref|ZP_06254027.1| threonine--tRNA ligase [Prevotella oris F0302] gi|281402450|gb|EFB33281.1| threonine--tRNA ligase [Prevotella oris F0302] Length = 649 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 91/421 (21%), Positives = 150/421 (35%), Gaps = 69/421 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R E+ P + L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTQLRLRLQELLRSLLRPYNYQEVITPGIGGKSLYVTSGHYAHYGKDAFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + +++ +SY++LP + FR E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEVYARKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + P+ K + L++F + + I L Sbjct: 383 TFTQDDAHIF-VRPDQVKAEFETNIDIILKVFKTFQFDNYEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D E W A + EK + E Sbjct: 428 RDPKDKEKYIGSD-----------------------EIWEESQNAIREACKEKGLVAREE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLPMSATFK-----GADGKDHYVQMGSY 317 + G + +G + GT Y+LP A FK + K V + Sbjct: 465 IGEAAFYGPKLDFMVKDAIGRKWQLGTIQVDYNLP--ARFKLEYTAEDNTKKTPVMIHRA 522 Query: 318 GIGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 G++ AV+ G +W PD VA IS + D +++ V Sbjct: 523 PFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYAKQVSKYFDSV 574 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DD E+IG + +L P VIVG K ++ V ++ + G + M +EE Sbjct: 575 GVRAVIDDRNEKIGRKIRDNELKRIPYMVIVGEKEAAEGLVSMRKQGGGEQATMKMEEFA 634 Query: 436 N 436 N Sbjct: 635 N 635 >gi|302545670|ref|ZP_07298012.1| threonine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653] gi|302463288|gb|EFL26381.1| threonine-tRNA ligase [Streptomyces himastatinicus ATCC 53653] Length = 403 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 92/397 (23%), Positives = 163/397 (41%), Gaps = 44/397 (11%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 G+ WLP G + + IR E+ R G + P L +L+ SG + Y +M Sbjct: 21 GAGLPYWLPDGAAVREALEEYIRAEERRAGYRHVYSPVLGKRELYEVSGHWAHYRDDMFP 80 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D + ++ P+ I+RS +SYR LP ++ +R EL G+ R R Sbjct: 81 PMDVGGEEVVLRPSLCPHHAVIYRSRARSYRELPLRMAELGGMYRAELSGVLGGLTRVRA 140 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + DA+ F E R + +G++++ R + GD S +F+ + Sbjct: 141 IQLNDAHIF-CALEQVAGEVEGALGMIRRAYEAMGIRAVRYRLS---LPGD-SGKFVAGS 195 Query: 215 DTGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + E V + + +P E + A Y DV ++ D Sbjct: 196 EVWERSVGVLGEVLRRVGVPYEVGKGE------------AAFYGPKIDV---QVADGAGR 240 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIES 331 +S ++ FG +Y GADG H V + IG++ R VA ++E Sbjct: 241 EFTLSTVQVDFHQPERFGLQYV--------GADGAKHRPVMVHRSIIGSVERAVAQLVE- 291 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA-CEKIYARLSKVGCDVFWDDMGEQIGS 390 H G +P +AP ++ ++ + + +A E+ R + D + G +G+ Sbjct: 292 VHGGA---FPGWLAPVQVVVLPVSEGEAGHAEAFVERCVERGLRARVD--GPERG-SLGA 345 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + A L+ P QV++G+K ++ +V + RL G R+ Sbjct: 346 RVRGARLV--PYQVVIGAKEAAEGQVAL--RLRGGRQ 378 >gi|24213940|ref|NP_711421.1| threonyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] gi|59798590|sp|Q8F6R1|SYT_LEPIN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|24194795|gb|AAN48439.1|AE011305_9 threonyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] Length = 638 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 4/160 (2%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD ++ L + + G W P G +++ +R E N+ Sbjct: 234 QYLFQIEEAKKRDHRKIGKEMDLFS--FQKEGPGFPFWHPKGTILWNSLAEYLRSECNKR 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + S++LW +SG +D++ + M D +++ P + + I++ H+ S Sbjct: 292 GYQEIKTPAVLSSELWKKSGHWDNFHENMY-FTDIDEEDYALKPMNCPGCSLIYKHHLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 YR LP F + R EL G+ R R F D++ + Sbjct: 351 YRELPLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIY 390 >gi|311029306|ref|ZP_07707396.1| prolyl-tRNA synthetase [Bacillus sp. m3-13] Length = 477 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 76/391 (19%), Positives = 148/391 (37%), Gaps = 77/391 (19%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLRLADRNDK 102 P G +N+ + + TG + +P + + L E + + E+ + D+ Sbjct: 44 PYGYALWENIKDALDKRIKETGHENVYMPLFIPESLLQKEKDHIEGFAPEVAWVTHGGDE 103 Query: 103 AM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFL 156 + + PT E + + +++ I SYR+LP + Q +++ RP +R+ EFL Sbjct: 104 KLQERLVVRPTSEVLFGEHYKNIIHSYRDLPKLYNQWANVVRWEKTTRP---FLRTLEFL 160 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 ++ ++ T E + KM Y I + +IP ++ Sbjct: 161 WQEGHTCHETDEQAHEETVKMLNVYAEICE--NILAIP----------------VIKGQK 202 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 E + F + Y S +H+ K S + Sbjct: 203 TEKEKFAGAKYT---------------------------YTIESLMHDGKALQSATSH-- 233 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + G ++ F +GK YVQ S+G R++ A+I D + Sbjct: 234 ------------HLGDGFAKAFGIQFLNREGKQEYVQQTSWGF-TTRIIGAMIMVHGDDR 280 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS---KVGCDVFWDDMGEQIGSQFA 393 G++ P +AP ++ ++ I H + D + +LS +VG D ++ G +F Sbjct: 281 GLVVPPRIAPTQVMIVPIAQHKEGVLDFAYDLKEKLSEFIRVGIDA----SDKKPGWKFN 336 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ G PL++ G + + +V + R TG Sbjct: 337 EYEMKGIPLRLEAGPRDIEQQQVVLVRRDTG 367 >gi|260583498|ref|ZP_05851246.1| threonine--tRNA ligase [Granulicatella elegans ATCC 700633] gi|260158124|gb|EEW93192.1| threonine--tRNA ligase [Granulicatella elegans ATCC 700633] Length = 647 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 90/424 (21%), Positives = 166/424 (39%), Gaps = 73/424 (17%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q G+ WLP G + I +++ G + P + L+ SG + Y Sbjct: 252 MISQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPVMADVGLYKTSGHWAHY 311 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + ++ P + ++++HI SYR LP ++ + R E Sbjct: 312 QEDMFPPMDMGDGELLVLRPMNCPHHMMVYKNHIHSYRELPIRIAELGMMHRYEKSGALS 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 G+ R RE + D ++F + P+ K + ++ ++ +K R Sbjct: 372 GLQRVREMTLNDGHTF-VRPDQIKDEFKRILDLIREVYKDFNVKDYRFR----------- 419 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-- 265 +D D ++ FDD E W A + +E Sbjct: 420 --------------LSYRDPED-----KHKYFDDD-------EMWNKAEAMLKEAMDEMG 453 Query: 266 -KLFDSLPEN---------KRVSARGIE-----VGHIFYFGTKYSLPMSATFKGADGKD- 309 + F+++ E + +A G+E + F ++ L T+ G DG + Sbjct: 454 LEYFEAIGEAAFYGPKLDIQFKTAMGLEETMSTIQLDFLLPERFDL----TYVGEDGDNT 509 Query: 310 HYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 H + G+ A R VA +IE KG +P +AP + ++I + DA Sbjct: 510 HRPVVIHRGVVSTAERFVAYLIEEY---KG-AFPTWLAPVQATIIPVSVEHHY--DAARA 563 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + ++ +G V DD E++G + + P Q+++G K V + V + R G +E Sbjct: 564 LKEKMMSLGLRVELDDRNEKMGYKIRASQTQKIPYQLVIGDKEVEEGTVTV--RRYGSKE 621 Query: 428 DMSL 431 +S+ Sbjct: 622 TVSM 625 >gi|45658307|ref|YP_002393.1| threonyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|59798553|sp|Q72PK6|SYT_LEPIC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|45601549|gb|AAS71030.1| threonyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 638 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 4/160 (2%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD ++ L + + G W P G +++ +R E N+ Sbjct: 234 QYLFQIEEAKKRDHRKIGKEMDLFS--FQKEGPGFPFWHPKGTILWNSLAEYLRSECNKR 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + S++LW +SG +D++ + M D +++ P + + I++ H+ S Sbjct: 292 GYQEIKTPAVLSSELWKKSGHWDNFHENMY-FTDIDEEDYALKPMNCPGCSLIYKHHLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 YR LP F + R EL G+ R R F D++ + Sbjct: 351 YRELPLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIY 390 >gi|167587363|ref|ZP_02379751.1| threonyl-tRNA synthetase [Burkholderia ubonensis Bu] Length = 635 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 8/136 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +V F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGHVQV----FKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSF 163 G+MR R F+ DA+ F Sbjct: 371 GLMRVRGFVQDDAHIF 386 >gi|86132750|ref|ZP_01051342.1| Prolyl-tRNA synthetase [Dokdonia donghaensis MED134] gi|85816704|gb|EAQ37890.1| Prolyl-tRNA synthetase [Dokdonia donghaensis MED134] Length = 492 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 84/164 (51%), Gaps = 9/164 (5%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F GK +V S+G+ + R++ A+I + D +G+ Sbjct: 234 GKALQAGTSHFLGQNFAKAFDVKFTSNQGKQEHVWATSWGV-STRLMGALIMTHSDDQGL 292 Query: 339 IWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKV----GCDVFWDDM-GEQIGSQF 392 + P ++APF++ ++ I K +Q+ DA ++ L + G V +D+ + G +F Sbjct: 293 VLPPNLAPFQVVIVPIYKNQEQL--DAISQVANELVQDLKLHGVSVKFDNRDTHKPGWKF 350 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +L G PL++ +G K + VE+ R T +E ++ E V++ Sbjct: 351 NEYELKGVPLRIGIGPKDLEKRTVELARRDTLTKEFVAKETVVD 394 Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + ++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 116 EEELIVRPTSEAIIWNTYKGWIQSYRDLPLLINQWANVVRWEMRTRL-FLRTAEFLWQEG 174 Query: 161 YS 162 ++ Sbjct: 175 HT 176 >gi|328553230|gb|AEB23722.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens TA208] Length = 638 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 6/157 (3%) Query: 16 RDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 ++AE +H+ + L+ M + + G+ +LP GQ + + + +R +Q+ E+ P Sbjct: 238 KEAEKRNHRKLGAELQLFMFSEEAPGMPFYLPNGQFIRNTLESFLRSKQDAYHYQEVRTP 297 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + + LW +SG +D Y KE + ++ + + P + IF+ ++SYR LP Sbjct: 298 MMMNQRLWEQSGHWDHY-KENMYFSEADQQRFALKPMNCPGHMLIFKERLRSYRELPIRM 356 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 + R E G++R R F DA+ F +TP+ Sbjct: 357 AEFGQVHRHEFSGALNGLLRVRSFCQDDAHIF-VTPD 392 >gi|322833539|ref|YP_004213566.1| threonyl-tRNA synthetase [Rahnella sp. Y9602] gi|321168740|gb|ADW74439.1| threonyl-tRNA synthetase [Rahnella sp. Y9602] Length = 642 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 86/412 (20%), Positives = 153/412 (37%), Gaps = 48/412 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYDYQEVKGPFMMDRVLWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIRMVYDMYSTFGFEKIVVKLSTRPEKRIGTD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A+ D P E + I L Sbjct: 432 -EMWTRAEDDLAAALTENDIPFEYQPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKG-ADGKDHYVQMGSYGIGAMRV 324 D L R + G + +SLP ++A++ G ++ + V + +G+M Sbjct: 471 HDCLD-------RAWQCGTV---QLDFSLPGRLNASYIGESNDRQVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP ++ ++NI E++ +L G V D Sbjct: 521 FIGILTEEYAG---FFPTWMAPVQVVIMNITDSQAT---YVEELTKKLQDAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+IG + L P ++ G K V KV ++ R M + EV++ Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVSEVVD 626 >gi|206559848|ref|YP_002230612.1| threonyl-tRNA synthetase [Burkholderia cenocepacia J2315] gi|238693072|sp|B4E7I6|SYT_BURCJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|198035889|emb|CAR51780.1| threonyl-tRNA synthetase [Burkholderia cenocepacia J2315] Length = 635 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 15/164 (9%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + + H + S G+ W P G V +R N Sbjct: 231 YLHMLEE----AEKRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAM--IYGPTHEEVMTDIFRS 120 G +E+ P + LW SG + +Y + M +++ D A+ + P H +V F+ Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHVQV----FKH 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 ++SYR+LP + + R+E G+MR R F+ DA+ F Sbjct: 343 GLRSYRDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIF 386 >gi|194765983|ref|XP_001965104.1| GF21565 [Drosophila ananassae] gi|190617714|gb|EDV33238.1| GF21565 [Drosophila ananassae] Length = 749 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 84/409 (20%), Positives = 169/409 (41%), Gaps = 44/409 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G + P G + + ++ E + G E+ P + +A LW+ SG + Y + Sbjct: 363 FHELSPGSCFFQPRGAHIYNTLMDFMKAEYRKRGFQEVISPNIYNAKLWMTSGHWQHYAE 422 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M +K + P + IF + +S+R LP + R+EL G+ Sbjct: 423 NMFSFEVEKEKFAL-KPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLT 481 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F PE K S K + +L+ + + S + + P Sbjct: 482 RVRRFQQDDAHIF-CAPEQIK-SEMKGCLEFLKHVYTIFGFSFQLVLSTRP-----EKYL 534 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 L + + ++ +F +P + D A Y D+ + D+ Sbjct: 535 GELEQWNDAEKALAESLNEFGMPWKENPGDG------------AFYGPKIDI---TIMDA 579 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVI 329 L + + ++ F +++L ++ DG K V + +G++ + A++ Sbjct: 580 LKRAHQCATIQLD----FQLPIRFNL----SYIADDGEKKRPVIIHRAILGSVERMIAIL 631 Query: 330 ESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYAR--LSKVGCDVFWDDMGE 386 + GK WP ++P ++ ++ + A+DQ + ++++A +S+ CD G+ Sbjct: 632 TENFAGK---WPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHAAGFMSEADCDA-----GD 683 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + + A L F ++VG K S + V ++ R + ++S+ E+I Sbjct: 684 TMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELI 732 >gi|105892737|gb|ABF75902.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia cenocepacia AU 1054] gi|116647586|gb|ABK08227.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia cenocepacia HI2424] Length = 618 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 8/136 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 238 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRE 297 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +V F+ ++SYR+LP + + R+E Sbjct: 298 NMFTTESEKRDYAIKPMNCPGHVQV----FKHGLRSYRDLPLRYAEFGSCHRNEASGALH 353 Query: 148 GVMRSREFLMKDAYSF 163 G+MR R F+ DA+ F Sbjct: 354 GLMRVRGFVQDDAHIF 369 >gi|189347188|ref|YP_001943717.1| prolyl-tRNA synthetase [Chlorobium limicola DSM 245] gi|259511580|sp|B3EE36|SYP_CHLL2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189341335|gb|ACD90738.1| prolyl-tRNA synthetase [Chlorobium limicola DSM 245] Length = 481 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/331 (19%), Positives = 131/331 (39%), Gaps = 63/331 (19%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ I+SYR+LP Q R E+R R +R+ EFL ++ + T Sbjct: 108 PTSETIIWASYKKWIQSYRDLPILINQWANVVRWEMRTRL-FLRTTEFLWQEGH----TA 162 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 +K ++ + + I+ + + + + P+ E A ET FC + Sbjct: 163 HATKEEASEEVLRMITIYKKFAEEYMAL-----PVIMGRKTESEKFAGADET--FCIEAM 215 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 M + ++ G Sbjct: 216 MQ------------------------------------------------DGKALQAGTS 227 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + G ++ F+ + G+ +V S+G+ + R++ A+I + D +G++ P +A Sbjct: 228 HHLGQNFAKAFDCQFQTSAGELDFVWATSWGV-STRLIGALIMAHSDDRGLVLPPKLASR 286 Query: 348 KISLINIKAHDQVC-RDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVADLLGFPLQVI 405 ++ +I I D+ + + I L K G F D + G +FA +L G PL++ Sbjct: 287 QVVVIPILRGDKTAVLEQADAIVCTLKKHGIPAFVDSSDQNSPGWKFAEYELQGIPLRIE 346 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +G + ++ K + R T + ++ L++ + Sbjct: 347 LGPRDLAGKKCVVARRDTLEKTELPLDDTFS 377 >gi|312885526|ref|ZP_07745164.1| prolyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] gi|311301994|gb|EFQ79025.1| prolyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] Length = 490 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 10/190 (5%) Query: 249 VEQWTA-PYAATSDVHNEKLFDSLP----ENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E W A P NE+ +L E + ++ G + G ++ F Sbjct: 197 AENWLALPVVRGRKTANERFAGALDTYCIEALMQDGKALQAGTSHFLGQNFAKAFDVKFT 256 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCR 362 +GK +V S+G+ + R++ A++ + D G++ P +AP ++ ++ I ++ +++ + Sbjct: 257 SKEGKQEFVWATSWGV-STRLMGALVMAHSDDSGLVLPPKLAPIQVVIVPIFRSEEELAQ 315 Query: 363 --DACEKIYARLSKVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + + L V +D+ Q G +FA +L G PL+V +G + +++ VE+ Sbjct: 316 ISEVADALSKALKAKNIRVKYDNRDTQRPGFKFAEYELKGIPLRVAIGGRDLANGTVELA 375 Query: 420 HRLTGIREDM 429 R T +E + Sbjct: 376 RRDTKTKETV 385 Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 1/97 (1%) Query: 85 RYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 + D G ++ + ++ +I PT E ++ + +R I+SYR+LP Q R E+R Sbjct: 98 KNDGEGNIIVDETAKLEEELIVRPTSETIIWNTYRGWIQSYRDLPLLINQWANVVRWEMR 157 Query: 145 PRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 R +R+ EFL ++ ++ T E + +M Y Sbjct: 158 TRL-FLRTTEFLWQEGHTAHATAEEAIAETEQMLHVY 193 >gi|210634040|ref|ZP_03297958.1| hypothetical protein COLSTE_01876 [Collinsella stercoris DSM 13279] gi|210158984|gb|EEA89955.1| hypothetical protein COLSTE_01876 [Collinsella stercoris DSM 13279] Length = 587 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 90/404 (22%), Positives = 157/404 (38%), Gaps = 60/404 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ + G +LP G + + RE ++ G +E+S P + ++ LW SG +D Y Sbjct: 207 MMRDEAPGFPFFLPNGMILKNTLLDYWREIHHKAGYVEISTPQIMNSQLWKTSGHWDHYK 266 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M ++ I P + ++ S SYR LP +I L R EL+ G+ Sbjct: 267 DNMYSTMIDGEEYCI-KPMNCPGGVLVYASKPHSYRELPIRAGEIGLVHRHELKGALHGL 325 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 R R F DA+ F +TPE + ++ + G + R E +G D Sbjct: 326 FRVRCFNQDDAHLF-VTPEQLTDEIVGVVNLITSVYDKFGFTYHLELSTRPEDS-MGSDE 383 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E A+ G + + M++ + + F Y D H E Sbjct: 384 DWE---RAEAG-LKTALERLGMEYVVNEGDGAF----------------YGPKIDFHLE- 422 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLPMS--ATFKGADG-KDHYVQMGSYGIG 320 DSL G + GT + +P + + ADG K + + G Sbjct: 423 --DSL-------------GRTWQCGTVQLDFQMPQNFDLEYVDADGTKKRPIMLHRVCFG 467 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ GK +W +AP ++ ++ + + RD ++ A+L G V Sbjct: 468 SIERFIGILIEHFAGKFPVW---LAPMQVKVLPVS---EKSRDYAHEVTAKLEAAGIRVV 521 Query: 381 WDDMGEQIGSQFAVADLLG---FPLQVIVGSKFVSDSKVEIKHR 421 DD E+IG + + + G P +I+G K V + ++ R Sbjct: 522 CDDRDEKIG--YKIREARGTDRVPYMLILGEKEVEAGNISVRDR 563 >gi|162218055|ref|YP_620875.2| threonyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] gi|162227933|ref|YP_835120.2| threonyl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|254245609|ref|ZP_04938930.1| Threonyl-tRNA synthetase, class IIa [Burkholderia cenocepacia PC184] gi|124870385|gb|EAY62101.1| Threonyl-tRNA synthetase, class IIa [Burkholderia cenocepacia PC184] Length = 635 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 8/136 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +V F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGHVQV----FKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSF 163 G+MR R F+ DA+ F Sbjct: 371 GLMRVRGFVQDDAHIF 386 >gi|84489803|ref|YP_448035.1| prolyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091] gi|114152212|sp|Q2NFL1|SYP_METST RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|84373122|gb|ABC57392.1| ProS [Methanosphaera stadtmanae DSM 3091] Length = 469 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 3/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++ + GT ++ F+ DG YV YG+ RV+A++I + D KG+ Sbjct: 212 GKTLQIATVHNLGTTFAHTFDIQFENEDGTHDYVHQVCYGLSD-RVIASLIAAHGDEKGL 270 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 P VAP ++ +I I K + V + + + L G V D + G ++ + Sbjct: 271 SLPPVVAPEQVIIIPIIFKENQDVVLNFTDNLEKLLKNNGIRVKQDKRELRPGKKYYEWE 330 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G PL++ VG + + ++ + I R TG +E + +E Sbjct: 331 KRGVPLRIEVGPRDIENNTIVINRRDTGDKEFVDYDE 367 >gi|71892130|ref|YP_277862.1| threonyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796236|gb|AAZ40987.1| threonyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 408 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 89/390 (22%), Positives = 149/390 (38%), Gaps = 50/390 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W G L + IIR + E+ PT+ + LW ++G +D+Y + + + Sbjct: 28 GMVFWHQNGWILLQELKKIIRTQLKEYKYQEVKSPTMINHTLWKKTGHWDNYHEHIFTTS 87 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + I P + IF IKSY++LP+ + R+E G+MR+REF Sbjct: 88 SESHEYCI-KPMNCPGHIQIFNQGIKSYKDLPYRIAEFGNCHRNEPSGSLHGLMRTREFT 146 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 D + F T N I++ G K+I ++ + P IG D + Sbjct: 147 QDDGHIF-CTKTQIFDELNHCIKMMYDIYNTFGFKTILVKLSTRPAKRIGTD------SI 199 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-KLFDSLP 272 DT E + ++ N+I Q+ A E L DSL Sbjct: 200 WDTAEQHL------------------STVLQHNNISFQYQPNDGAFYGPKIEFALLDSL- 240 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY---VQMGSYGIGAMRVVAAVI 329 R + G I +SLP + D + V + +G+M +I Sbjct: 241 ------DRTWQCGTI---QLDFSLPNLLNARYIDRHNSRVVPVMIHRAILGSMERFIGLI 291 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + G +P +AP ++ L+N+ EK K+ V D E+IG Sbjct: 292 TEEYAG---FFPTWLAPTQVVLMNVTDQQSEYVSVIEKKLIN-KKIRTKV--DLRNEKIG 345 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + L P +I G+K ++ + V I+ Sbjct: 346 FKIRYYTLQRIPYMLICGNKEMNQNTVAIR 375 >gi|291545263|emb|CBL18372.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus sp. 18P13] Length = 646 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 85/431 (19%), Positives = 160/431 (37%), Gaps = 52/431 (12%) Query: 15 PRDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIR 58 P+ AE+ ++ L + H+K G+ LP G + + + + Sbjct: 224 PKAAELEAYLKQLEEAKLRDHNKLGRELELFTTVDCIGQGLPIMLPKGARVIQLLQRFVE 283 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTD 116 +E+ R G + P + +DL+ SG +D Y + M L D ++ P Sbjct: 284 DEEQRRGYLLTKTPLMAKSDLYKISGHWDHYKEGMFVLGDEEKDKEVFALRPMTCPFQYQ 343 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 +F + +SYR+LP + FR+E G++R R+F + + + L PE + + Sbjct: 344 VFLNRPRSYRDLPMRLGETSTLFRNEDSGEMHGLIRVRQFTISEGHLI-LRPEQLEDEFR 402 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + LGL D+++ F + + + D + Sbjct: 403 GCLELANYMLTTLGL------------ADDVTYRFSQWDPNNTEKYIGTPEQWDEAQGAM 450 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF--YFGTK 293 D + +I A Y D+ + + K + I++ + FG + Sbjct: 451 KKILDHLGIHYTIGIDEAAFYGPKLDIQIKNV-----HGKEDTLITIQIDQMLAQLFGME 505 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 Y+ G + + + S G R +A +IE + G +W +AP ++ LI Sbjct: 506 YT-----DVDGTKRRPYIIHRTSLGCYE-RTLALLIE-KYAGAFPLW---LAPEQVKLIP 555 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I D ++ +L G + DD E++G + A L P + +G V Sbjct: 556 IADRHM---DYTLELARKLEAAGMRITVDDRAEKVGYKIRQAVLEKVPYMLTIGDNEVES 612 Query: 414 SKVEIKHRLTG 424 V ++ R G Sbjct: 613 KTVSVRSRRDG 623 >gi|32265941|ref|NP_859973.1| threonyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] gi|73919797|sp|Q7VJ09|SYT_HELHP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|32261990|gb|AAP77039.1| threonyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] Length = 604 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 87/396 (21%), Positives = 162/396 (40%), Gaps = 58/396 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + N+ ++ + G + P + +D+W +SG Y +Y KE + Sbjct: 229 GLPIWLPKGARLRHNIEHLLTQALKERGYEPVRGPEILKSDVWKKSGHYSNY-KENMYFT 287 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S +SYR LP FY+ + R E G++R REF Sbjct: 288 IIDEQEYGIKPMNCVGHIKVYQSSPRSYRELPLRFYEYGIVHRHERSGVLHGLLRVREFT 347 Query: 157 MKDAYSFDLTPEGSKH-----SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 DA+ F +T + + K ++ + + L + P ++ IG D Sbjct: 348 QDDAHIFCMTSQIKSEVNQILDFTKGIMNAFGFHYEMELSTRPQKS----IGND------ 397 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + E K ++ ++ IS I E A Y D+ K+ D+L Sbjct: 398 ---EVWENATAALKSALE----------ENHISYQ-IDEGGGAFYGPKIDI---KITDAL 440 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-----GAMRVVA 326 R + G I + + + F+ + +H VQ+ I G+ Sbjct: 441 -------KRKWQCGTI-----QIDMNLPERFELSYTDEHNVQVQPVMIHRAILGSFERFV 488 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A++ G+ +P +AP ++ LI I +A + R +KI +++ G D Sbjct: 489 AILTEHFGGE---FPLFIAPTQVILIPIGEAQLEYARILRDKI---ITQSGAYAELMDKN 542 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E + + +A+ PL V++G+K V + I+ R Sbjct: 543 ESLSKKIRLAEKQRVPLIVVIGAKEVESKILAIRDR 578 >gi|14590847|ref|NP_142919.1| prolyl-tRNA synthetase [Pyrococcus horikoshii OT3] gi|74579173|sp|O58734|SYP_PYRHO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|3257420|dbj|BAA30103.1| 480aa long hypothetical prolyl-tRNA synthetase [Pyrococcus horikoshii OT3] Length = 480 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 3/168 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + + +S + ++ DG YV ++G+ R++AAVI D +G+ Sbjct: 220 GRTLQIGTMHNYKQNFSKAYNILYEKEDGTHDYVHQTTFGMSE-RLLAAVIAIHGDDRGM 278 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P ++AP ++ ++ I K ++ + I L G V+ D ++ G +F + Sbjct: 279 VLPPTIAPIQVVIVPIPKKGSEEEVYSYAKGIEEELRDAGIRVYLDLRDKRPGWKFYDWE 338 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 L G P++V VG V +S V + R + + EE+++ F + Sbjct: 339 LKGVPVRVEVGPIDVQNSTVVLARRDKLEKITVKREELVDKVRELFED 386 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 5/123 (4%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+ WLP G K + N+ I EE RTG E+ P L + E+ + E+ Sbjct: 32 KGMNVWLPYGLKIMRNIEKFIHEEMERTGHQEVLFPALIPETEFKKEAEHIAGFEGEVFW 91 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D ++ PT E M +F I+S+ +LPF YQI +R E + ++R Sbjct: 92 VTHAGHEPLDVRLVLRPTSETAMYSMFALWIRSHADLPFKVYQIVNVYRYETKHTRPLIR 151 Query: 152 SRE 154 RE Sbjct: 152 VRE 154 >gi|94496356|ref|ZP_01302933.1| prolyl-tRNA synthetase [Sphingomonas sp. SKA58] gi|94424102|gb|EAT09126.1| prolyl-tRNA synthetase [Sphingomonas sp. SKA58] Length = 508 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 73/345 (21%), Positives = 133/345 (38%), Gaps = 73/345 (21%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E V+ F ++S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 114 EEPLVVRPTSETVIGAAFSRWVQSWRDLPVLINQWANVVRWEMRTRM-FLRTAEFLWQEG 172 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T + KM Y R F + ++P+ A P Sbjct: 173 HTAHATVGEAMDETLKMLEVY-RAFAEECV-AMPVIAGEKP------------------- 211 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 EN F ++ SI E + Sbjct: 212 --------------ENERFPGAVATYSI------------------------EAMMQDGK 233 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + GT +S + F+ A+G+ Q S+G+ + R++ +I + D G+ Sbjct: 234 ALQAGTSHFLGTTFSQAQNIKFQNAEGQQELAQTTSWGV-STRMIGGLIMTHGDDDGLRV 292 Query: 341 PDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 P VAP++I ++ + D + C + RL+++ D F + + + + A A Sbjct: 293 PPRVAPYQIVIVPMLRDTEEDAAIVEYCTNLVHRLNQL--DAFREPVRALLDKRPAKAAT 350 Query: 398 -------LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P+ + VGS+ V+ V + R RED L+ I Sbjct: 351 KRWGWVKKGAPIVIEVGSRDVAGGNVSVIRRDRLYREDGKLDSRI 395 >gi|302381720|ref|YP_003817543.1| threonyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302192348|gb|ADK99919.1| threonyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 639 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 94/443 (21%), Positives = 158/443 (35%), Gaps = 59/443 (13%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 Y L I + RD KL + + H + +G+ W P G + A +R + Sbjct: 232 YLLRIEEAEKRD----HRKLGRQMELFHMQEEGRGMVFWHPKGWILWQVIEAYMRRRLDA 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + W SG ++ Y M + + P + IF + Sbjct: 288 AGYVEVKTPQVLDRKFWEASGHWEKYRPNMFVCETVEGETLSLKPMNCPGHVQIFGIGQR 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP + R E G+MR R F DA+ F E + F+ Sbjct: 348 SYRELPLRMAEFGACHRYEPSGALHGLMRVRGFTQDDAHIF--CREDQIVEETRRFIELT 405 Query: 183 RIFHR-LGLKSIPMRAESGPIGGDLSHEFIVLAD--TGETQVFCSKDFMDFPIPSENTDF 239 RI H LG+++ + + P S EF A+ GE D P+ +E Sbjct: 406 RIVHADLGMQTAYINLATRPDVRAGSDEFWDKAEGMLGEAARLAGVD----PVIAEGDGA 461 Query: 240 -----DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 D + ++I +WT V LPE Sbjct: 462 FYAPKLDFVVKDAIGREWTCGTLQLDYV--------LPER-------------------- 493 Query: 295 SLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 ++A + G DG+ H M I G+ ++ ++ G +W +AP + + Sbjct: 494 ---LNAEYVGEDGQKHRPVMLHRAILGSFERFIGIMIENYAGAFPLW---LAPVQAVVAT 547 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I + E++ A+ G V D E++G + + P+ +VG Sbjct: 548 ITSD---ADGYAEEVAAKFKAAGLRVETDLRNEKVGYKVREHSVGKVPVIAVVGRNEAEQ 604 Query: 414 SKVEIKHRLTGIREDMSLEEVIN 436 +V I+ + + +S+EE I Sbjct: 605 GQVAIRRLGSQAQTVVSVEEAIR 627 >gi|194861340|ref|XP_001969762.1| GG23767 [Drosophila erecta] gi|190661629|gb|EDV58821.1| GG23767 [Drosophila erecta] Length = 746 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 83/409 (20%), Positives = 168/409 (41%), Gaps = 44/409 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G + P G + + I+ E + G E+ P + +A LW+ SG + Y + Sbjct: 361 HELSPGSCFFQPRGAHIYNTLMGFIKSEYRKRGFQEVISPNIYNAKLWMTSGHWQHYAEN 420 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + IF + +S+R LP + R+EL G+ R Sbjct: 421 MFSF-EAEKETFALKPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLTR 479 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F PE K S K + +L+ + + S + + P + Sbjct: 480 VRRFQQDDAHIF-CAPEQIK-SEMKGCLEFLKYVYTIFGFSFQLVLSTRP-----DNYLG 532 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 L + + ++ +F +P + D A Y D+ + D+L Sbjct: 533 ELEQWNDAEKALAESLNEFGMPWKENPGDG------------AFYGPKIDI---TIMDAL 577 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIE 330 + + ++ F +++L ++ DG K V + +G++ + A++ Sbjct: 578 KRAHQCATIQLD----FQLPIRFNL----SYIADDGEKKRPVIIHRAILGSVERMIAILT 629 Query: 331 SSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIY--ARLSKVGCDVFWDDMGEQ 387 + GK WP ++P ++ ++ + A+DQ + ++++ +S+ CD G+ Sbjct: 630 ENFAGK---WPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDA-----GDT 681 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + + A L F ++VG K S + V ++ R + ++S+ E+I Sbjct: 682 MNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELIT 730 >gi|302672266|ref|YP_003832226.1| prolyl-tRNA synthetase ProS [Butyrivibrio proteoclasticus B316] gi|302396739|gb|ADL35644.1| prolyl-tRNA synthetase ProS [Butyrivibrio proteoclasticus B316] Length = 477 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 3/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ FG ++ + G D + HYV S+G+ R + A+I D G+ Sbjct: 225 GRALQSATSHNFGDGFAKAFGIQYAGKDNQLHYVNQTSWGL-TTRTIGAMIMVHGDNSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ +I I+ + +A KI L+ G V D G +FA ++ Sbjct: 284 VVPPKIAPIQVVVIPIQQKKEGVLEAANKIAESLA--GFRVKVDSTDRTPGFKFAEQEMR 341 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P++V +G K + K + R T + + +++EV Sbjct: 342 GIPVRVEIGPKDLEAGKCVLCRRDTREKIECAIDEV 377 Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + D ++ I SY++LP Q +++ E RP +RSREFL ++ ++ Sbjct: 114 PTSETLFCDYYKGEIHSYKDLPQVLNQWCSVVRWEKETRP---FLRSREFLWQEGHTAHA 170 Query: 166 TPEGSKHSYNKMFVSY 181 T E ++ +M Y Sbjct: 171 TFEEAEERTQQMLNVY 186 >gi|203284615|ref|YP_002222355.1| threonyl-tRNA synthetase [Borrelia duttonii Ly] gi|238690570|sp|B5RMR3|SYT_BORDL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|201084058|gb|ACH93649.1| threonyl-tRNA synthetase [Borrelia duttonii Ly] Length = 583 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 83/415 (20%), Positives = 164/415 (39%), Gaps = 48/415 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G + + REE + G + P + + LW SG D Y + M Sbjct: 205 GLIFFHPHGARIRALIENFWREEHFKNGYDILFTPHIGKSWLWETSGHLDFYKESMFEKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G MR R F Sbjct: 265 EMDRSDYYVKPMNCPFHIAIYNTDKHSYRDLPFRWAELGTVYRYEKIGAIHGTMRVRGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ T E ++ + ++++ G ++ + P +G D + V Sbjct: 325 QDDAHII-CTYEQVNFEVREVLRFAIDMWNKFGFTNLKAYLSTKPEKAVGDDDDWQMAVK 383 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 K +DF N DFD I E A Y D+ K+ DSL Sbjct: 384 V--------LEKALIDF-----NIDFD-------IDEGGGAFYGPKIDL---KIIDSL-- 418 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPM--SATFKGADGKDHYVQMGSYG-IGAMRVVAAVIE 330 R ++ I + ++LP+ T+ DGK+ M +G++ ++ Sbjct: 419 -----GRAWQMSTIQF---DFNLPVRFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILV 470 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIG 389 + G +W +AP ++ +I + + + + ++ +R G + +D+ ++ Sbjct: 471 EHYGGAFPVW---LAPLQVVIIPV---NSIVEEYALEVLSRFQNEGIRIKFDNYCNMRMN 524 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ P I+G + V + K+ I+ R + L+E + + + SN Sbjct: 525 AKIRQYQSKKVPYMFIIGEREVVEGKISIRTRTNEQINGLELKEALEFVKLKISN 579 >gi|313235460|emb|CBY19737.1| unnamed protein product [Oikopleura dioica] Length = 800 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G + + IR E + G E+ P + +++LW SG + Y +M Sbjct: 396 SAGSCFWLPRGAVIYNRLQDFIRSEYRKRGFKEVVTPNIFNSELWKTSGHWQHYEDDMFT 455 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +DK + P + +F S ++SY+ LP F + R+EL G+ R R Sbjct: 456 FKVEDDKWAM-KPMNCPGHCVMFGSRLRSYKELPLRFADFGVLHRNELSGALSGLTRVRR 514 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 515 FQQDDAHIF 523 >gi|312876378|ref|ZP_07736363.1| threonyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311796872|gb|EFR13216.1| threonyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 647 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 83/410 (20%), Positives = 165/410 (40%), Gaps = 50/410 (12%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G K L + + +E+ + G + P + +DL+ SG +D Y M + Sbjct: 264 QGLPLLMPKGAKILQILQRFVEDEEEKRGYLLTKTPYMAKSDLYKISGHWDHYRDGMFVI 323 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P I+ S +SYR+LP + + FR+E G++R R+F Sbjct: 324 EEDENEVLALRPMTCPFQFLIYNSKQRSYRDLPIRYSETSTLFRNESSGEMHGLIRVRQF 383 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ P+ + + + I LG+++ D+ + F Sbjct: 384 TLSDAHII-CRPDQVEEEFKGVLDLIQYIMKTLGIEN------------DIWYRFSRWDP 430 Query: 216 TGETQVFCSKDFMDFPIPSENTDFD-----DIISLNSIVEQWTAP-YAATSDVHNEKLF- 268 + + ++D P E T+ D D + +N + A Y D+ + ++ Sbjct: 431 NNKEK------YIDNPEAWEKTENDMKNILDKLGINYKEAKGEAAFYGPKLDIQFKNVYG 484 Query: 269 --DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVV 325 D++ I V F ++ + T+ DG K + + IG Sbjct: 485 KEDTI----------ITVQIDFALAERFDM----TYVDRDGQKKRPIIIHRSSIGCYERT 530 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A++ ++G +W ++P +I +I + + + + + L + G V D Sbjct: 531 LAMLIEKYNGAFPLW---LSPVQIRVIPVSDN---FNEYAKNVARILKENGFRVEEDYRS 584 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E +G + A L P VIVG K ++ V ++ R G ++E+ I Sbjct: 585 ETVGYKIRDAQLQKIPYMVIVGEKEQKENTVAVRDRKKGDLGSFTIEDFI 634 >gi|163752580|ref|ZP_02159762.1| threonyl-tRNA synthetase [Shewanella benthica KT99] gi|161327534|gb|EDP98738.1| threonyl-tRNA synthetase [Shewanella benthica KT99] Length = 642 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 145/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IRE+ + E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWTLFLELEKFIREKLGQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + +I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTKSENREYVI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + + G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQVQQEVSACIKMVYDTYATFGFNNIVIKLSTRPEQRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A+ Q + D +P E + I L Sbjct: 432 -EMWDRAEEALKQALIANDIEFEILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + GK +P +AP ++ ++NI D ++ L + G D Sbjct: 521 FLGILIEEYAGK---FPTWLAPMQVVVMNITDKQS---DYAHEVVNLLKENGIRASKDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|323447698|gb|EGB03610.1| hypothetical protein AURANDRAFT_55515 [Aureococcus anophagefferens] Length = 657 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 79/389 (20%), Positives = 145/389 (37%), Gaps = 37/389 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + + R G + P + + DLW SG +D Y + M Sbjct: 255 GLCFWHPRGARIRMLMEDTWKAAHERGGYELLVTPHIANVDLWKTSGHFDFYAEGMFDQM 314 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + P + +++ ++SYR+LPF + ++ +R E G+MR R F Sbjct: 315 DVEKEQYQLKPMNCPFHCLVYKDQLRSYRDLPFRWAELGTVYRYERSGTLQGLMRVRGFT 374 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F TPE + + I + G + + P S E A Sbjct: 375 QDDAHIF-CTPEQLEDEIVAVLELTEEILSKFGFDDYELMLSTRPDKAVGSDEIWTKATA 433 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 K + + + E A Y D+ K+ D+L + Sbjct: 434 ALKGALDRKGWD-----------------HGVDEGGGAFYGPKIDL---KIKDALGRQWQ 473 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDG 335 S V F ++ L ++ A G+ M I G++ A++ S G Sbjct: 474 CST----VQCDFNLPERFEL----EYRAASGQAERPIMVHRAIFGSLERFFAILLESCGG 525 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 +W +AP ++ L+ + RD + + A+ ++ G D +++ Q A Sbjct: 526 DLPLW---LAPTQMRLLPVTDD---ARDFSKAVAAKAAQRGIRCEIDSGKDRLNKQIRNA 579 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + P+ +VG K ++ + ++ R G Sbjct: 580 ETQRVPIMCVVGEKEMASGDLAVRARTMG 608 >gi|315646839|ref|ZP_07899954.1| threonyl-tRNA synthetase [Paenibacillus vortex V453] gi|315277769|gb|EFU41093.1| threonyl-tRNA synthetase [Paenibacillus vortex V453] Length = 635 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 90/410 (21%), Positives = 159/410 (38%), Gaps = 45/410 (10%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + G+ +LP G + + RE Q G E+ P + + LW SG +D Y Sbjct: 255 MFSDDAPGMPFFLPKGTIIRNELEQFARELQFHRGYDEVRTPLMMNKRLWEMSGHWDHY- 313 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 K+ + + +++ + P + ++++ + SYR LP + R E G+ Sbjct: 314 KDNMYFSKVDEQEYVMKPMNCPGHMLVYQNSLHSYRELPIRLSEFGQVHRHEYSGALSGM 373 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F DA+ F + P+ H + ++ +R+ + + P S E Sbjct: 374 MRVRTFCQDDAHIF-VRPD-QIHDEIGQVIDFISQVYRVFGFDYTIELSTRPEDSMGSDE 431 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 A++ +V D P I E A Y D H + D Sbjct: 432 LWEQAESSLQEVL---DQQKLPY--------------RINEGDGAFYGPKIDFH---ILD 471 Query: 270 SLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVV 325 SL R + G I F F K+ L ++ D + H V + G++ Sbjct: 472 SL-------KRSWQCGTIQLDFQFPEKFDL----SYIAEDNQKHRPVVIHRAVFGSIERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP + LI + H D K+ RL G V D Sbjct: 521 IGILTEHYGGAFPLW---LAPVHVMLIPVSDH---YIDFSLKVKKRLEHAGVRVEVDIRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++G + A LL P ++G K ++ V ++ R G + +++++I Sbjct: 575 EKLGYKIREAGLLKTPYTFVLGEKEMNSDLVAVRKRGEGELGESAIDDMI 624 >gi|313246933|emb|CBY35782.1| unnamed protein product [Oikopleura dioica] Length = 800 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G + + IR E + G E+ P + +++LW SG + Y +M Sbjct: 396 SAGSCFWLPRGAVIYNRLQDFIRSEYRKRGFKEVVTPNIFNSELWKTSGHWQHYEDDMFT 455 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +DK + P + +F S ++SY+ LP F + R+EL G+ R R Sbjct: 456 FKVEDDKWAM-KPMNCPGHCVMFGSRLRSYKELPLRFADFGVLHRNELSGALSGLTRVRR 514 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 515 FQQDDAHIF 523 >gi|257075630|ref|ZP_05569991.1| prolyl-tRNA synthetase [Ferroplasma acidarmanus fer1] Length = 470 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 9/157 (5%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-LWVESGRYDSYGKEMLR 95 KG+ WLP G K + ++++++RE + G E+S P L S + L VE + E+ Sbjct: 36 KGMNVWLPYGLKIIHSIDSLLREYSDDGGIEEVSFPVLISREQLEVEFEHVKGFENEIYW 95 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D + PT E M +F I+S+ +LPF YQI +R E + +R Sbjct: 96 VTKGGTTPLDIDLALRPTSEAAMYTMFPLWIRSHSDLPFRIYQIVNVYRYETKHTRSFIR 155 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 RE +A++ + E ++ K YL+I RL Sbjct: 156 VREIHFYEAHTAHVDFEDAE----KQMDEYLKIMERL 188 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 81/159 (50%), Gaps = 4/159 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R +++G I +G ++ + +G YV ++G+ R++AAVI D KG++ Sbjct: 224 RSLQIGTIHEYGENFAKNYGIKYLDENGDMKYVSQTTFGLSE-RLMAAVIGIHGDDKGLV 282 Query: 340 WPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 P +AP ++ ++ I + +D++ + I ++L ++G D+ G +F ++ Sbjct: 283 LPYKLAPVQVIIVPIPSDNYDEII-EYSNGIKSKLMEIGIRCQIDNSDYTPGYKFNEWEM 341 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P+++ +G + V+D + I R + + LEE+ N Sbjct: 342 RGVPVRIEIGKREVNDKTLTISLRTRKKKIKIELEEISN 380 >gi|308190360|ref|YP_003923291.1| proline--tRNA ligase [Mycoplasma fermentans JER] gi|319777760|ref|YP_004137411.1| prolyl-tRNA synthetase [Mycoplasma fermentans M64] gi|307625102|gb|ADN69407.1| proline--tRNA ligase [Mycoplasma fermentans JER] gi|318038835|gb|ADV35034.1| Prolyl-tRNA synthetase [Mycoplasma fermentans M64] Length = 478 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 3/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y +S FK + + Y S+G+ + R++ A+I + D +GI Sbjct: 221 GRALQAGTSHYLAQNFSKQFEIQFKTENNELDYAYQTSWGV-STRLLGAIIMTHGDNRGI 279 Query: 339 IWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I P VAP +I ++ + A+ ++ C+ +Y LS+ V D + G + + +++ Sbjct: 280 IIPPRVAPIQIDVLELFANKNKEVHTYCDNLYKDLSR-KFRVRLDSSDKGPGFKASNSEI 338 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ VG K + + V I R T + ++ EV Sbjct: 339 QGVPLRIEVGPKDIENKSVTIVRRDTLEKINIKQSEV 375 Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 17/153 (11%) Query: 52 NVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEM---LRLADRN-DKAMIY 106 N+N RE+ G + +P L L+ E + E+ ++ D++ D+ + Sbjct: 53 NLNECFREK----GVQNVYLPLLIPEKLFNKEKDHIAGFNPELATITKVGDKDLDEKVFI 108 Query: 107 GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLT 166 PT E + D+F++ I+SY++LP + Q R E + +RSREFL ++ ++ Sbjct: 109 RPTSEVLFADLFKNSIESYKDLPMIYNQWANVVRWE-KTTNPFLRSREFLWQEGHTCHSN 167 Query: 167 P-------EGSKHSYNKMFVSYLRIFHRLGLKS 192 P +G +Y+K ++L I +G K+ Sbjct: 168 PLEARKFTKGMISTYSKFLKNFLAIPTIIGKKT 200 >gi|302878338|ref|YP_003846902.1| threonyl-tRNA synthetase [Gallionella capsiferriformans ES-2] gi|302581127|gb|ADL55138.1| threonyl-tRNA synthetase [Gallionella capsiferriformans ES-2] Length = 637 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 91/398 (22%), Positives = 152/398 (38%), Gaps = 54/398 (13%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H KG W + Q + A RE + E+ P + LW +SG +++Y Sbjct: 261 GMVFWHPKGWTLWQEIEQ----YMRAKFREHDYQ----EVRTPAIMDKTLWEKSGHWENY 312 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M A N + P + I+ + SYR+LP + R+E G Sbjct: 313 RDNMFTTASENRDYAV-KPMNCPGHVQIYNHGLHSYRDLPLRLAEFGSCHRNESSGSLHG 371 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGGDLS 207 +MR R F DA+ F E S F+ L ++ G ++ ++ + P S Sbjct: 372 LMRVRGFTQDDAHIF--CTEAQVESEVSNFIVMLNEVYRDFGFDNVIVKLSTRPEKRVGS 429 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E A+ G ++ +D+ + P E + + Sbjct: 430 DETWDKAEAGLAAAL-KQNRLDYEVQPGEGAFYGPKVEFT-------------------- 468 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMR 323 L DSL R + G I ++LP +SA F D + V + +G+M Sbjct: 469 LKDSLD-------RMWQCGTI---QLDFNLPVRLSAEFVDEDNTRKPPVMLHRAILGSME 518 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ H G +W ++P + L+NI Q + ++I L++ G V D Sbjct: 519 RFIGILIEHHAGAFPMW---LSPVQTVLMNIS---QAQEEYAKEIGQILARAGIRVQLDL 572 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P Q+IVG K VS + ++ R Sbjct: 573 RNEKITYKIREHSLQKLPYQLIVGDKEVSGRLIAVRTR 610 >gi|333030425|ref|ZP_08458486.1| Prolyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] gi|332741022|gb|EGJ71504.1| Prolyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] Length = 493 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 85/163 (52%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + + YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVKFVNRENQLEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINI-KAHDQVCR--DACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P ++AP ++ ++ I K +Q+ + + I +L +G V +D+ ++ G +FA Sbjct: 295 VLPPALAPIQVVIVPIFKGEEQLAKIDERVNPIINKLKGMGVSVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++++G++ + + +E+ R T + S+E + Y Sbjct: 355 YELKGVPVRLVLGARDLENGTIEVMRRDTLEKTTHSIEGIEEY 397 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ I+SYR+LP Q FR E+R R +R+ EFL ++ Sbjct: 118 EEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFLWQEG 176 Query: 161 YS 162 ++ Sbjct: 177 HT 178 >gi|73981321|ref|XP_860741.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 4 [Canis familiaris] Length = 695 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 99/424 (23%), Positives = 169/424 (39%), Gaps = 78/424 (18%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E R G E+ PT Sbjct: 299 EAELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYTRRGFSEVKTPT 358 Query: 74 LQSADLWVESGRYDSYGKEMLRL----ADRNDKAMIYGPTHEEVMTDIFR-----SHIKS 124 L SA LW SG ++ Y ++M L +DR ++ T T + +H Sbjct: 359 LFSAKLWELSGHWEHYQEDMFVLQPPGSDRLASSLSVCSTSHSTDTLALKPMNCPAHCLM 418 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + + P ++ ++ L+ D FGV+ E GS + LR Sbjct: 419 FAHRPRSWRELPLRLAD-----FGVLHRAE------------ASGSLGGLTR-----LRC 456 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F + D +H F D E ++ DF+ F +S Sbjct: 457 FQQ-----------------DDAHIFCA-PDQLEEEIQGCLDFLRSVYAVLGFSFRLALS 498 Query: 245 LNS---IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--S 299 + E A DVH L D+L R + G I + LP+ Sbjct: 499 TRPSGFLGESCLWDQAEQIDVH---LHDAL-------GRPHQCGTI---QLDFQLPLRFD 545 Query: 300 ATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +KG G + V + +G++ + V+ S+ GK WP ++PF++ +I + A Sbjct: 546 LQYKGQAGVLERPVLIHRAVLGSVERMLGVLAESYGGK---WPLWLSPFQVVVIPVGAEQ 602 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ R+A +++ A + + CD+ D G + + A L + Q +VG K S V Sbjct: 603 EEYAREAQQRLQA--AGLVCDLD-ADSGLTLSRRVRRAQLAHYNFQFVVGQKEQSKKTVN 659 Query: 418 IKHR 421 I+ R Sbjct: 660 IRTR 663 >gi|323446287|gb|EGB02506.1| hypothetical protein AURANDRAFT_59726 [Aureococcus anophagefferens] Length = 452 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/415 (20%), Positives = 154/415 (37%), Gaps = 38/415 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD + KL L + + G+ W P G + + + R G + Sbjct: 25 EAKKRDHRVLGKKLDLFS-IQEAAGGGLCFWHPRGARIRMLMEDTWKAAHERGGYELLVT 83 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + + DLW SG +D Y + M D + P + +++ ++SYR+LPF Sbjct: 84 PHIANVDLWKTSGHFDFYAEGMFDQMDVEKEQYQLKPMNCPFHCLVYKDQLRSYRDLPFR 143 Query: 132 FYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + ++ +R E G+MR R F DA+ F TPE + + I + G Sbjct: 144 WAELGTVYRYERSGTLQGLMRVRGFTQDDAHIF-CTPEQLEDEIVAVLELTEEILSKFGF 202 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + P S E A K + + + E Sbjct: 203 DDYELMLSTRPDKAVGSDEIWTKATAALKGALDRKGWD-----------------HGVDE 245 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ K+ D+L + S V F ++ L ++ A G+ Sbjct: 246 GGGAFYGPKIDL---KIKDALGRQWQCST----VQCDFNLPERFEL----EYRAASGQAE 294 Query: 311 YVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 M I G++ A++ S G +W +AP ++ L+ + RD + + Sbjct: 295 RPIMVHRAIFGSLERFFAILLESCGGDLPLW---LAPTQMRLLPVTDD---ARDFSKAVA 348 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 A+ ++ G D +++ Q A+ P+ +VG K ++ + ++ R G Sbjct: 349 AKAAQRGIRCEIDSGKDRLNKQIRNAETQRVPIMCVVGEKEMASGDLAVRARTMG 403 >gi|297205704|ref|ZP_06923099.1| threonine--tRNA ligase [Lactobacillus jensenii JV-V16] gi|297148830|gb|EFH29128.1| threonine--tRNA ligase [Lactobacillus jensenii JV-V16] Length = 656 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 85/405 (20%), Positives = 164/405 (40%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 272 GLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 331 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + +++ HI+SYR LP ++ + R E G+ R RE Sbjct: 332 DMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 391 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + E + + K+ + ++ + R LS+ D Sbjct: 392 TLNDGHTF-VALEQVQEEFAKILKLIMDVYKDFDITDYYFR---------LSYR-----D 436 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M D + L+ + E A Y D+ + +L + Sbjct: 437 PKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 493 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L ++ G DG++H M GI G M A + + Sbjct: 494 ETMSTIQLD----FMLPERFDL----SYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 545 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N+ AH + + K+ L K G D E++G + Sbjct: 546 KGAFPTW---LAPEQVEIIPVNLDAHGEYAK----KVRDELLKHGFRAEVDFRNEKMGYK 598 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G ++ + V ++ T +E MSL++ I+ Sbjct: 599 IRESQTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSLDKFID 643 >gi|197303940|ref|ZP_03168972.1| hypothetical protein RUMLAC_02677 [Ruminococcus lactaris ATCC 29176] gi|197296908|gb|EDY31476.1| hypothetical protein RUMLAC_02677 [Ruminococcus lactaris ATCC 29176] Length = 478 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 1/156 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G +FG+ + + + + H V S+G+ + RV+ A+I D G+ Sbjct: 223 GKALQSGTSHFFGSAFPNAFGIQYSDKNNELHEVYETSWGM-STRVIGALIMVHGDDSGL 281 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P VAP + +I I H + D ++ L G DD + G +F+ ++L Sbjct: 282 VIPPRVAPVQTMVIPIAQHKEGVLDKANELLDTLKAAGYKAKIDDSDKAPGWKFSGQEIL 341 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P ++ +G K + +++ I R T + +SL+E+ Sbjct: 342 GIPTRIEIGPKDIENNQAVIVRRDTREKIVVSLDEI 377 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 10/152 (6%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG ++LP G +N+ + TG + +P + + L E + + E+ Sbjct: 36 KGCMNYLPNGYALWENIQKELDARFKETGVENVYLPVMIPESLLQKEKDHIEGFAPEVAW 95 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + + + PT E + D++ ++SYR+LP + Q L++ RP Sbjct: 96 VTHGGTEPLQERFCIRPTSETLFCDVWSKTVQSYRDLPKVWNQWCSVLRWEKTTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +RSREFL ++ ++ T E ++ +M+ Y Sbjct: 153 LRSREFLWQEGHTIHATYEEAEERTKQMWRVY 184 >gi|148244740|ref|YP_001219434.1| threonyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] gi|166225515|sp|A5CWF9|SYT_VESOH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146326567|dbj|BAF61710.1| threonyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] Length = 636 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 14/180 (7%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H+KG W+ L Q + I R+ G E+ P L LW +SG +D + Sbjct: 259 GMVFWHAKG---WI-LYQLVEQYMRGIFRD----NGYQEVHTPQLIDKSLWEKSGHWDKF 310 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 G M D+ P + I+ +KSYRNLP + R+E G Sbjct: 311 GDVMFTTTS-GDRDYAVKPMNCPAHIQIYNQGLKSYRNLPLRLAEFGSCHRNEPSGTLHG 369 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 +MR R F+ D + F TPE + + ++ G + I ++ + P +G D Sbjct: 370 IMRVRNFVQDDGHIF-CTPEQIQDEVSTFIDLTFNVYKYFGFEKINIKLSTRPKKRVGSD 428 >gi|168187192|ref|ZP_02621827.1| prolyl-tRNA synthetase [Clostridium botulinum C str. Eklund] gi|169294885|gb|EDS77018.1| prolyl-tRNA synthetase [Clostridium botulinum C str. Eklund] Length = 478 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG +S + + + + YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDNFSKAFNIQYNDKNSQLQYVHQTSWGV-TTRLIGAIIMVHGDDSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 P +AP ++ ++ I H + D E++ R+SKV V D + G +F ++ Sbjct: 284 KLPPRIAPLQVVIVPIAQHKEGVLDKAEELRERISKVA-RVKVDSSDKMPGWKFNEYEMK 342 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+++ VG K + +++V + R T + +S++E+ Sbjct: 343 GVPVRLEVGPKDIENNQVVLVRRDTREKIFVSMDEL 378 >gi|238810182|dbj|BAH69972.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 482 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 3/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y +S FK + + Y S+G+ + R++ A+I + D +GI Sbjct: 225 GRALQAGTSHYLAQNFSKQFEIQFKTENNELDYAYQTSWGV-STRLLGAIIMTHGDNRGI 283 Query: 339 IWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I P VAP +I ++ + A+ ++ C+ +Y LS+ V D + G + + +++ Sbjct: 284 IIPPRVAPIQIDVLELFANKNKEVHTYCDNLYKDLSR-KFRVRLDSSDKGPGFKASNSEI 342 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ VG K + + V I R T + ++ EV Sbjct: 343 QGVPLRIEVGPKDIENKSVTIVRRDTLEKINIKQSEV 379 Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 17/153 (11%) Query: 52 NVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEM---LRLADRN-DKAMIY 106 N+N RE+ G + +P L L+ E + E+ ++ D++ D+ + Sbjct: 57 NLNECFREK----GVQNVYLPLLIPEKLFNKEKDHIAGFNPELATITKVGDKDLDEKVFI 112 Query: 107 GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLT 166 PT E + D+F++ I+SY++LP + Q R E + +RSREFL ++ ++ Sbjct: 113 RPTSEVLFADLFKNSIESYKDLPMIYNQWANVVRWE-KTTNPFLRSREFLWQEGHTCHSN 171 Query: 167 P-------EGSKHSYNKMFVSYLRIFHRLGLKS 192 P +G +Y+K ++L I +G K+ Sbjct: 172 PLEARKFTKGMISTYSKFLKNFLAIPTIIGKKT 204 >gi|313247748|emb|CBY15872.1| unnamed protein product [Oikopleura dioica] Length = 538 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G + + IR E + G E+ P + +++LW SG + Y +M Sbjct: 320 SAGSCFWLPRGAVIYNRLQDFIRSEYRKRGFKEVVTPNIFNSELWKTSGHWQHYEDDMFT 379 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +DK + P + +F S ++SY+ LP F + R+EL G+ R R Sbjct: 380 FKVEDDKWAM-KPMNCPGHCVMFGSRLRSYKELPLRFADFGVLHRNELSGALSGLTRVRR 438 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 439 FQQDDAHIF 447 >gi|213650865|ref|ZP_03380918.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 622 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 412 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 591 >gi|262043503|ref|ZP_06016623.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039149|gb|EEW40300.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 530 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 5/193 (2%) Query: 13 ENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 E +AE H+ + R + H ++ G W P G ++ A +R G +E+ Sbjct: 245 EKTAEAEKRDHRKLGRELDLFHFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEV 304 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 + P + LW SG +D+Y M + + P + +F+ IKSYR+LP Sbjct: 305 NTPDVMDRSLWEISGHWDNYRDHMFTTQTEDGRNFALKPMNCPGAVSLFKYGIKSYRDLP 364 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + R E G++R R F DA+ F T + + + L I+ + Sbjct: 365 VRLSEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIF-CTLQQVEGECKSILQLVLDIYKQF 423 Query: 189 GLKSIPMRAESGP 201 G + + ++ + P Sbjct: 424 GFEEVAIKLSTRP 436 >gi|213161901|ref|ZP_03347611.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 530 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 144 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 203 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 204 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 262 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 263 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSD-- 319 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 320 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 358 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 359 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 408 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 409 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 462 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 463 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 499 >gi|294010776|ref|YP_003544236.1| threonyl-tRNA synthetase [Sphingobium japonicum UT26S] gi|292674106|dbj|BAI95624.1| threonyl-tRNA synthetase [Sphingobium japonicum UT26S] Length = 668 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 14/146 (9%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G W P G + A +R + G E+ P + A W +SG + Y + Sbjct: 268 LQQEAHGSVFWHPKGYIIWRALEAYMRRAIDDAGYREVKTPQVMDARQWEQSGHWGKYRE 327 Query: 92 EMLRLADR-----------NDKA--MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 M + D +D A M P + IFR IKSYR+LP FY+ Sbjct: 328 NMFVIPDEVPNVEDEGPLVSDDADWMALKPMNCPAHVLIFRQGIKSYRDLPLRFYENGCC 387 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSF 163 R+E G+MR R+F DA+ F Sbjct: 388 HRNEPHGALHGLMRVRQFTQDDAHIF 413 >gi|159904581|ref|YP_001548243.1| prolyl-tRNA synthetase [Methanococcus maripaludis C6] gi|259511605|sp|A9A787|SYP_METM6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|159886074|gb|ABX01011.1| prolyl-tRNA synthetase [Methanococcus maripaludis C6] Length = 460 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 4/148 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++G + G ++ F+ DG+ +V YGI R +A++I D KG+ Sbjct: 212 GKTMQIGTVHNLGQNFAKTFELEFETPDGEKDFVYQTCYGISD-RAIASLISVHGDEKGL 270 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P VAP +I LI + K +++ D +++ R K V DD + G ++ + Sbjct: 271 VIPVDVAPIQIVLIPLLFKGKEEIVMDKIKEL-NRTLKSEFRVLLDDRDIRPGRKYNDWE 329 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + G PL++ +G + + + + I R TG Sbjct: 330 IKGVPLRIELGPRDIENGQALIVRRDTG 357 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 51/221 (23%), Positives = 82/221 (37%), Gaps = 18/221 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG +LP G K I+R+ + T E P L +L + G + ++ + Sbjct: 24 KGCGVYLPYGFKIRRYSFEILRKLLDETNHDETLFPMLIPENLLAKEGEHIKGFEDEVFW 83 Query: 97 ADRNDKA-----MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 K + PT E M + + IK + +LP YQ+ FR E + ++R Sbjct: 84 VTHGGKTPLEVKLALRPTSETTMYYMMKQWIKVHTDLPMKLYQVVNTFRYETKHTRPLIR 143 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS-IPMRAESGPI-GGDLSH 208 RE + K+A++ T E + Y F + + I R E G D + Sbjct: 144 LREIMSFKEAHTAHATKEDCDAQITEALNLYGEFFDEICVPYIISKRPEWDKFPGADYTM 203 Query: 209 EFIVLADTGET----------QVFCSKDFMDFPIPSENTDF 239 F + G+T Q F ++F P DF Sbjct: 204 AFDTIYPDGKTMQIGTVHNLGQNFAKTFELEFETPDGEKDF 244 >gi|323333338|gb|EGA74735.1| YHR020W-like protein [Saccharomyces cerevisiae AWRI796] Length = 674 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/338 (20%), Positives = 135/338 (39%), Gaps = 70/338 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + ++SYR+LP Q R E + +R+REFL ++ ++ LT Sbjct: 291 PTSETVMYPYYAKWVQSYRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTAHLTA 350 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + ++ ++ Y ++ L ++P +V E + F DF Sbjct: 351 KDAEEEVLQILDFYAGVYEE--LLAVP----------------VVKGRKTEKEKFAGGDF 392 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + E + +P+ + RGI+ Sbjct: 393 ------------------TTTCEGY------------------IPQ----TGRGIQGATS 412 Query: 288 FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 + G +S + + + G DH + S+G+ + RV+ ++ D KG++ P V Sbjct: 413 HHLGQNFSKMFNLSVENPLGSDHPKIFAYQNSWGL-STRVIGVMVMIHSDNKGLVIPPRV 471 Query: 345 APFKISLINIKAHDQVCRDACEKIY-------ARLSKVGCDVFWD-DMGEQIGSQFAVAD 396 + F+ +I + + + + I+ +RL KVG F D + G +F+ + Sbjct: 472 SQFQSVVIPVGITKKTSEEQRKHIHETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYE 531 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L G P+++ +G K + ++V + R + +S +E+ Sbjct: 532 LKGIPIRIELGPKDIEKNQVVVVRRNDSKKYVVSFDEL 569 >gi|260655129|ref|ZP_05860617.1| proline--tRNA ligase [Jonquetella anthropi E3_33 E1] gi|260630051|gb|EEX48245.1| proline--tRNA ligase [Jonquetella anthropi E3_33 E1] Length = 478 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/354 (20%), Positives = 131/354 (37%), Gaps = 85/354 (24%) Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLM 157 ++ ++ +I PT E V+ ++ I+S+R+LP Q R E RPR +R+ EFL Sbjct: 98 EKLEEPLIVRPTSETVIGYMYSKWIQSWRDLPLLINQWANVMRWEKRPRL-FLRTSEFLW 156 Query: 158 KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG 217 ++ ++ T E + +M L ++ R+ + + G + G Sbjct: 157 QEGHTAHATSEEAVQETERM----LEVYRRIMTDDLALPVVEG------------VKSAG 200 Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 E FP E + ++S Sbjct: 201 ER----------FPGALETYTCETMVS--------------------------------- 217 Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + ++ G + G +S + F+ D Y S+G+ + R++ AVI + D G Sbjct: 218 DTKAVQAGTSHFLGQNFSKAFNIQFQAQDETMQYAWTTSWGV-STRLIGAVIMTHSDADG 276 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD- 396 +I P VAP K +I I + ++ K A L++ + + +G +F D Sbjct: 277 LIIPPHVAPVKAVVIPISKDEAKSKELAGKA-AELAQ--------SLNKVLGGRFVKVDE 327 Query: 397 --------------LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G PL++ +G K + V + R TG + D + E+ Sbjct: 328 QFYMRPSDRFFYHLQKGVPLRIELGEKDDAAGTVRLVRRDTGEKLDAAQGELTT 381 >gi|58263294|ref|XP_569057.1| threonine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21] gi|134108684|ref|XP_776995.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259678|gb|EAL22348.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223707|gb|AAW41750.1| threonine-tRNA ligase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 772 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 3/134 (2%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G +LP+G + + + + I++E + G E+ P + +A+LW SG + +Y ++M + Sbjct: 381 SPGSAFFLPMGMRIYNTLMSFIKDEYFKRGFSEVGSPNIFNANLWKTSGHWQNYAEDMFQ 440 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L +++ + P + IF + +SY+ LP F + + R+E G+ R R Sbjct: 441 L-KADEEQLALKPMNCPGHCLIFDARERSYKELPLRFAEFGVLHRNEASGALSGLTRVRR 499 Query: 155 FLMKDAYSFDLTPE 168 F+ DA+ F TP+ Sbjct: 500 FVQDDAHIF-CTPD 512 >gi|329954822|ref|ZP_08295839.1| proline--tRNA ligase [Bacteroides clarus YIT 12056] gi|328526926|gb|EGF53937.1| proline--tRNA ligase [Bacteroides clarus YIT 12056] Length = 497 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 84/163 (51%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I + ++ EK I A+L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNAEMLAKIDEKIAGIVAKLKSMGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ G P+++++G + + ++ +E+ R T +E S + + Y Sbjct: 355 YEVKGVPVRLVMGGRDLENNTMEVMRRDTLEKETRSCDGIEEY 397 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWINSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|297663737|ref|XP_002810324.1| PREDICTED: LOW QUALITY PROTEIN: threonyl-tRNA synthetase, mitochondrial-like [Pongo abelii] Length = 719 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 101/430 (23%), Positives = 170/430 (39%), Gaps = 64/430 (14%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E R G E+ PT Sbjct: 297 EAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPT 356 Query: 74 LQSADLWVESGRYDSYGKEMLRL----ADRNDKA------------MIYGPTHEEVMTDI 117 L S LW +SG ++ Y ++M + +DR + + P + + Sbjct: 357 LFSTKLWKQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLM 416 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 F +S+R LP R E G+ R R F DA+ F T + + + Sbjct: 417 FAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQ--LEAEIQ 474 Query: 177 MFVSYLR-IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + +LR ++ LG S + + P G L D C D + + Sbjct: 475 SCLDFLRSVYAVLGF-SFHLALSTRPSG--------FLGDP------CLWDQAEQVLKQA 519 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 +F + LNS A Y DVH L D+L R + G I + Sbjct: 520 LKEFGEPWDLNSGD---GAFYGPKIDVH---LHDAL-------GRPHQCGTI---QLDFQ 563 Query: 296 LPM--SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 LP+ +KG G + V + +G++ + V+ S GK WP ++PF++ +I Sbjct: 564 LPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGGK---WPLWLSPFQVVVI 620 Query: 353 NIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + ++ ++A + + A D D G + + A L + Q +VG K Sbjct: 621 PVGTEQEEYAKEAQQSLRAAGLVSDLDA---DSGLTLSRRVRRAQLAHYNFQFVVGQKEQ 677 Query: 412 SDSKVEIKHR 421 S V I+ R Sbjct: 678 SKRTVNIRTR 687 >gi|282934500|ref|ZP_06339755.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1] gi|281301447|gb|EFA93736.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1] Length = 644 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 85/405 (20%), Positives = 164/405 (40%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 260 GLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + +++ HI+SYR LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + E + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALEQVQEEFAKILKLIMDVYKDFDITDYYFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M D + L+ + E A Y D+ + +L + Sbjct: 425 PKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L ++ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFDL----SYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N+ AH + + K+ L K G D E++G + Sbjct: 534 KGAFPTW---LAPEQVEIIPVNLDAHGEYAK----KVRDELLKHGFRAEVDFRNEKMGYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G ++ + V ++ T +E MSL++ I+ Sbjct: 587 IRESQTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSLDKFID 631 >gi|222094191|ref|YP_002528248.1| prolyl-tRNA synthetase [Bacillus cereus Q1] gi|221238246|gb|ACM10956.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus cereus Q1] Length = 476 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FGT +S F +GK YV S+G+ + R++ +I D G+ Sbjct: 223 GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQYVHQTSWGV-STRMIGGLIMVHSDNNGL 281 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P VAP ++ ++ I H + ++ + KV V D + G +F ++ Sbjct: 282 VMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVA-RVKIDASNKTPGWKFNEYEMK 340 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+++ VG K + ++V + R T +E ++++++ Sbjct: 341 GIPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMDQL 376 >gi|218131142|ref|ZP_03459946.1| hypothetical protein BACEGG_02747 [Bacteroides eggerthii DSM 20697] gi|317476982|ref|ZP_07936224.1| prolyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] gi|217986662|gb|EEC52996.1| hypothetical protein BACEGG_02747 [Bacteroides eggerthii DSM 20697] gi|316906775|gb|EFV28487.1| prolyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 497 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 84/163 (51%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F + K YV S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEYVWATSWGV-STRLMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK---IYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I + ++ EK I A+L +G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNAEMLAKIDEKVAGIVAKLKSMGISVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ G P+++++G + + ++ +E+ R T +E S + + Y Sbjct: 355 YEVKGVPVRLVMGGRDLENNTMEVMRRDTLEKETRSCDGIEEY 397 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 A + ++ +I PT E ++ + +++ I SYR+LP Q FR E+R R +R+ EFL Sbjct: 114 AAKLEEELIIRPTSETIIWNTYKNWINSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFL 172 Query: 157 MKDAYSFDLT 166 ++ ++ T Sbjct: 173 WQEGHTAHAT 182 >gi|294632148|ref|ZP_06710708.1| threonyl-tRNA synthetase [Streptomyces sp. e14] gi|292835481|gb|EFF93830.1| threonyl-tRNA synthetase [Streptomyces sp. e14] Length = 442 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 86/391 (21%), Positives = 158/391 (40%), Gaps = 46/391 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + IR+ + R G + P L +L+ SG +D Y +M Sbjct: 57 GLPYWLPDGATVRHTLEEYIRDAERRAGYRHVYSPVLGKRELYEISGHWDHYSDDMFPPM 116 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + ++ P+ I+RS S+R LP ++ +R EL G+ R R Sbjct: 117 DLGGEQVVLRPSLCPHHAVIYRSRAHSHRELPLRMAELGGMYRSELSGVLGGLTRVRAIQ 176 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE-SGPIGGDLSHEFIVLAD 215 + DA+ F T + R + LG+ R GP G +++ + Sbjct: 177 LNDAHIF-CTLDQVAEEAGAALEMIRRAYEALGVTPARYRLSLPGPGG-----KYVAAPE 230 Query: 216 TGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + +D +P E + + A Y DV ++ DS Sbjct: 231 KWRRATALLTEVLDRSGLPYEAAEGE------------AAFYGPKIDV---QVADSAGRE 275 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESS 332 +S ++ F+ ++ L + GADG H V + IG++ R VA ++E + Sbjct: 276 STLSTVQVD----FHQPERFDL----HYIGADGARHRPVMVHRSIIGSVERAVAHLVE-A 326 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG--CDVFWDDMGEQIGS 390 H G W +AP ++ ++ + A + E + R + +G ++ + G +G+ Sbjct: 327 HGGAFPAW---LAPVQLVVLPVSAAEL---PQAEALARRCTDLGLRAEIAAPERG-TLGA 379 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + L+ P Q ++G+K +D V ++ R Sbjct: 380 RIRASRLV--PYQAVIGAKEATDDHVSLRLR 408 >gi|300778952|ref|ZP_07088810.1| proline--tRNA ligase [Chryseobacterium gleum ATCC 35910] gi|300504462|gb|EFK35602.1| proline--tRNA ligase [Chryseobacterium gleum ATCC 35910] Length = 545 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 81/163 (49%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F +GK + S+G + R++ A+I + D G+ Sbjct: 287 GKALQAGTSHFLGQNFAKAFDVKFTNKEGKIEHAWATSWGT-STRLMGALIMTHSDDFGL 345 Query: 339 IWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAV 394 + P ++AP ++ ++ I K +Q+ + I A+L G V +D D + G +FA Sbjct: 346 VLPPTLAPIQVVIVPIFKGEEQLEQISEVALDIQAKLRAKGISVKFDNDTQNKPGWKFAE 405 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++ +G + + + VEI R +E S+E + +Y Sbjct: 406 YELKGVPVRIAMGPRDLENKSVEIARRDNLTKEVRSIEGLDSY 448 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + +++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 169 EEELIVRPTSEAIIWNTYKNWIQSYRDLPILINQWANVVRWEMRTRL-FLRTAEFLWQEG 227 Query: 161 YS 162 ++ Sbjct: 228 HT 229 >gi|326623540|gb|EGE29885.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 622 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 412 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 591 >gi|224370824|ref|YP_002604988.1| threonyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2] gi|259516390|sp|C0QAP1|SYT_DESAH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|223693541|gb|ACN16824.1| ThrS2 [Desulfobacterium autotrophicum HRM2] Length = 636 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 12/191 (6%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMI--HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +++E RD K+ R G+ HQ + G+ + G + + + A R+E Sbjct: 225 KAYLHLIEEAKKRD----HRKIGTRMGLFSFHQEAAGMPFFHAKGMEMWNELLAYWRDEH 280 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +E P + S LW +SG +++Y + M + D + A+ P + ++++ Sbjct: 281 RAAGYVETKTPVMMSRHLWEKSGHWENYRENMYTSVVDGEEYAI--KPMNCPGGMLLYKT 338 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SYR+LP +I L R EL G+ R R F DA+ F +TPE + + Sbjct: 339 ESHSYRDLPLRAGEIGLVHRHELSGALSGLFRVRAFHQDDAHIF-MTPEQIESEILGVLE 397 Query: 180 SYLRIFHRLGL 190 RI+ R GL Sbjct: 398 LVERIYSRFGL 408 >gi|294499151|ref|YP_003562851.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294349088|gb|ADE69417.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551] Length = 405 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 95/443 (21%), Positives = 182/443 (41%), Gaps = 58/443 (13%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE +H+ + L M + + G+ +LP G + + +++ + G E+ P Sbjct: 6 EAEKRNHQKLGQELELFMSIEEAPGMPFFLPNGMIIRNELENYWKQKHYKAGYQEIKTPI 65 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + +LW +SG ++ Y + M ++ +++ P + +F S +SYR LP + Sbjct: 66 MMKQELWEQSGHWEHYHENMY-FSNVDEQNYAIKPMNCPGAILLFSSKRRSYRELPIRYA 124 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSF----DLTPEGSK-HSYNKMFVSYLRIFHR 187 ++ L R EL G++R R F DA+ F + E S+ ++ F S+ ++ Sbjct: 125 ELGLVHRHELSGSLNGLLRVRSFTQDDAHLFVELSQIEAEISRILAFIHDFYSHFGFDYK 184 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 + L + P + G++ E A+ V K +D+ + + F Sbjct: 185 VELSTRPEK-----FMGNI--ETWNQAEKSLQSVLSEKG-LDYQVNEGDGAF-------- 228 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKG 304 Y D H + DSL R + G + F K+ + G Sbjct: 229 --------YGPKIDFH---ILDSL-------GRSWQCGTVQLDFLMPEKF----DCMYIG 266 Query: 305 ADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D K H M I G++ A++ ++G+ +W +AP ++ L+ I A V + Sbjct: 267 EDNKPHRPVMIHRAIYGSVERFMAILIEHYEGQFPLW---LAPVQLKLLPI-APPHV--E 320 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L G V DD E+IG + A++ P ++G K V + + ++ Sbjct: 321 YAYKVKHELELKGYRVEVDDRIEKIGLKIREAEMQKVPYMAVIGDKEVENESLAMRKHGK 380 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 +S+EE + + ++NR Sbjct: 381 KNIGTVSMEEAAVHLNKEKNSNR 403 >gi|205352944|ref|YP_002226745.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|238690498|sp|B5RAX3|SYT_SALG2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|205272725|emb|CAR37641.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628018|gb|EGE34361.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 642 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMGRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 611 >gi|158321007|ref|YP_001513514.1| threonyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] gi|158141206|gb|ABW19518.1| threonyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] Length = 636 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 89/404 (22%), Positives = 155/404 (38%), Gaps = 57/404 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G + P G + + REE + G E+ P + + LW +SG +D Y + Sbjct: 257 LQEEGPGFPFFHPRGMVLRNALENFWREEHVKRGYDEIKTPIILNEKLWRQSGHWDHY-Q 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D P + ++ SYR+ P ++ + R EL G+M Sbjct: 316 ENMYFTKIDDGDYAIKPMNCPGSILMYNRKKHSYRDFPIRMGELGIVHRHELSGALHGLM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKM--FVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F DA+ F L PE K + FV Y +++ G K Sbjct: 376 RVRNFTQDDAHLFVL-PEQIKEEIIGIIDFVDY--VYNIFGFKY---------------- 416 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 I L+ E + +++ + I S D+ I E A Y D H E Sbjct: 417 -HIELSTRPENSMGTDEEW-ELAIGSLKGALDEKELSYKINEGDGAFYGPKIDFHLEDC- 473 Query: 269 DSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAM 322 +G + GT + +P + GADG++H + + G++ Sbjct: 474 ---------------IGRTWQCGTIQLDFQMPQRFDMNYVGADGENHRPIMLHRVIFGSV 518 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVF 380 A++ + GK +P +AP ++ ++ I K H+ K+ + G V Sbjct: 519 ERFIAILIEHYAGK---FPAWLAPIQVQILPIADKHHEYAI-----KLEREMKARGIRVE 570 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 D E+IG + A L P +++G K + +V ++ R G Sbjct: 571 VDSRNEKIGYKIREAQLSKVPYMLVIGDKEMEAGEVAVRSRDRG 614 >gi|256269239|gb|EEU04564.1| YHR020W-like protein [Saccharomyces cerevisiae JAY291] Length = 688 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/338 (19%), Positives = 134/338 (39%), Gaps = 70/338 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + ++SYR+LP Q R E + +R+REFL ++ ++ LT Sbjct: 291 PTSETVMYPYYAKWVQSYRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTAHLTA 350 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + ++ ++ Y ++ L ++P +V E + F DF Sbjct: 351 KDAEEEVLQILDFYAGVYEE--LLAVP----------------VVKGRKTEKEKFAGGDF 392 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + E + +P+ + RGI+ Sbjct: 393 ------------------TTTCEGY------------------IPQ----TGRGIQGATS 412 Query: 288 FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 + G +S + + + G DH + S+G+ + RV+ ++ D KG++ P V Sbjct: 413 HHLGQNFSKMFNLSVENPLGSDHPKIFAYQNSWGL-STRVIGVMVMIHSDNKGLVIPPRV 471 Query: 345 APFKISLINIKAHDQVC-------RDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVAD 396 + F+ +I + + ++ + +RL KVG F D + G +F+ + Sbjct: 472 SQFQSVVIPVGITKKTSEEQRKHIQETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYE 531 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L G P+++ +G K + ++V + R + +S +E+ Sbjct: 532 LKGIPIRIELGPKDIEKNQVVVVRRNDSKKYVVSFDEL 569 >gi|229011636|ref|ZP_04168819.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|228749594|gb|EEL99436.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 639 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE QN E+ P + + +LW +SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMNQELWEKSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ + K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDHKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|332159170|ref|YP_004424449.1| prolyl-tRNA synthetase [Pyrococcus sp. NA2] gi|331034633|gb|AEC52445.1| prolyl-tRNA synthetase [Pyrococcus sp. NA2] Length = 480 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 3/168 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + + ++ + ++ DG YV ++G+ R++AAVI D +GI Sbjct: 220 GRTLQIGTMHNYKQNFAKAYNIMYEKEDGTHDYVHQTTFGMSE-RLLAAVIAIHGDDRGI 278 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P ++AP ++ ++ I K ++ ++I L G V D ++ G +F + Sbjct: 279 VLPPTIAPIQVVIVPIPKKGSEEEVYKYAKEIEEELKMAGIRVHLDLRDKRPGWKFYDWE 338 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 L G P++V VG V +S V + R + + EE+++ F + Sbjct: 339 LKGVPVRVEVGPIDVQNSTVVLARRDKLEKITVKREELVDRVRELFDD 386 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 5/124 (4%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+ WLP G K + N+ I EE RTG E+ P L + E+ + E+ Sbjct: 32 KGMNVWLPYGLKIMRNIERFIHEEMERTGHQEVLFPALIPETEFKKEAEHIAGFEGEVFW 91 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D +I PT E M +F I+S+ +LP YQI +R E + ++R Sbjct: 92 VTHAGHEPLDVRLILRPTSETAMYSMFALWIRSHADLPLKVYQIVNVYRYETKHTRPLIR 151 Query: 152 SREF 155 RE Sbjct: 152 VREI 155 >gi|323304725|gb|EGA58486.1| YHR020W-like protein [Saccharomyces cerevisiae FostersB] Length = 687 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/338 (20%), Positives = 135/338 (39%), Gaps = 70/338 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + ++SYR+LP Q R E + +R+REFL ++ ++ LT Sbjct: 290 PTSETVMYPYYAKWVQSYRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTAHLTA 349 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + ++ ++ Y ++ L ++P +V E + F DF Sbjct: 350 KDAEEEVLQILDFYAGVYEE--LLAVP----------------VVKGRKTEKEKFAGGDF 391 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + E + +P+ + RGI+ Sbjct: 392 ------------------TTTCEGY------------------IPQ----TGRGIQGATS 411 Query: 288 FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 + G +S + + + G DH + S+G+ + RV+ ++ D KG++ P V Sbjct: 412 HHLGQNFSKMFNLSVENPLGSDHPKIFAYQNSWGL-STRVIGVMVMIHSDNKGLVIPPRV 470 Query: 345 APFKISLINIKAHDQVCRDACEKIY-------ARLSKVGCDVFWD-DMGEQIGSQFAVAD 396 + F+ +I + + + + I+ +RL KVG F D + G +F+ + Sbjct: 471 SQFQSVVIPVGITKKTSEEQRKHIHETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYE 530 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L G P+++ +G K + ++V + R + +S +E+ Sbjct: 531 LKGIPIRIELGPKDIEKNQVVVVRRNDSKKYVVSFDEL 568 >gi|256850831|ref|ZP_05556220.1| threonyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260661042|ref|ZP_05861956.1| threonyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|256615893|gb|EEU21081.1| threonyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260547979|gb|EEX23955.1| threonyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] Length = 643 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 85/405 (20%), Positives = 164/405 (40%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + +++ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + E + + K+ + ++ + R LS+ D Sbjct: 379 TLNDGHTF-VALEQVQEEFAKILKLIMDVYKDFDITDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M D + L+ + E A Y D+ + +L + Sbjct: 424 PKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L ++ G DG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFDL----SYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N+ AH + + K+ L K G D E++G + Sbjct: 533 KGAFPTW---LAPEQVEIIPVNLDAHGEYAK----KVRDELLKHGFRAEVDFRNEKMGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G ++ + V ++ T +E MSL++ I+ Sbjct: 586 IRESQTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSLDKFID 630 >gi|229167201|ref|ZP_04294942.1| Threonyl-tRNA synthetase [Bacillus cereus AH621] gi|228616239|gb|EEK73323.1| Threonyl-tRNA synthetase [Bacillus cereus AH621] Length = 639 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE QN E+ P + + +LW +SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMNQELWEKSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ + K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDHKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|6321808|ref|NP_011884.1| hypothetical protein YHR020W [Saccharomyces cerevisiae S288c] gi|731640|sp|P38708|YHI0_YEAST RecName: Full=Putative prolyl-tRNA synthetase YHR020W; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|500692|gb|AAB68873.1| Yhr020wp [Saccharomyces cerevisiae] gi|285809922|tpg|DAA06709.1| TPA: hypothetical protein YHR020W [Saccharomyces cerevisiae S288c] Length = 688 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/338 (20%), Positives = 135/338 (39%), Gaps = 70/338 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + ++SYR+LP Q R E + +R+REFL ++ ++ LT Sbjct: 291 PTSETVMYPYYAKWVQSYRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTAHLTA 350 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + ++ ++ Y ++ L ++P +V E + F DF Sbjct: 351 KDAEEEVLQILDFYAGVYEE--LLAVP----------------VVKGRKTEKEKFAGGDF 392 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + E + +P+ + RGI+ Sbjct: 393 ------------------TTTCEGY------------------IPQ----TGRGIQGATS 412 Query: 288 FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 + G +S + + + G DH + S+G+ + RV+ ++ D KG++ P V Sbjct: 413 HHLGQNFSKMFNLSVENPLGSDHPKIFAYQNSWGL-STRVIGVMVMIHSDNKGLVIPPRV 471 Query: 345 APFKISLINIKAHDQVCRDACEKIY-------ARLSKVGCDVFWD-DMGEQIGSQFAVAD 396 + F+ +I + + + + I+ +RL KVG F D + G +F+ + Sbjct: 472 SQFQSVVIPVGITKKTSEEQRKHIHETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYE 531 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L G P+++ +G K + ++V + R + +S +E+ Sbjct: 532 LKGIPIRIELGPKDIEKNQVVVVRRNDSKKYVVSFDEL 569 >gi|224541524|ref|ZP_03682063.1| hypothetical protein CATMIT_00694 [Catenibacterium mitsuokai DSM 15897] gi|224525561|gb|EEF94666.1| hypothetical protein CATMIT_00694 [Catenibacterium mitsuokai DSM 15897] Length = 585 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 83/381 (21%), Positives = 157/381 (41%), Gaps = 48/381 (12%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G ++ I ++ G + P+L + L+ +SG + Y +M Sbjct: 201 KGLPMWLPNGFTVRRLLSDYIMNKELELGYEHVMTPSLGNVKLYKKSGHWAHYKDDMFPA 260 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +D+A + P + +++S + SYR+LP +I FR E G+ R+R F Sbjct: 261 MELDDEAYVLRPMNCPHHMVMYKSTLHSYRDLPVRIAEIANDFRFEASGALTGIERARAF 320 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 D++ F P+ + + L ++ G K R + L D Sbjct: 321 TQNDSHIF-CRPDQIAQEFKNVAHLILDVYKDFGFKDYSFR--------------LSLRD 365 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + + D + SEN L ++++ + + E F + Sbjct: 366 KNNKEKYFGND--ELWEKSEN-------ELREVLKEMDVEF---YEAEGEAAFYGPKLDV 413 Query: 276 RVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAM-RVVAAV 328 +V + +GH T Y LP T+ +G K V + +G++ R +A + Sbjct: 414 QVKS---ALGHDVTLSTIQLDYQLPERFELTYVDENGDKVRPVVIHRAILGSLDRFIAFL 470 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 +E + G +W +AP ++ +I +K HD+ ++ + A+L K V D+ E Sbjct: 471 LEETK-GNLPLW---LAPTQVQVIPVKLEYHDEYAKE----VVAKLRKAHFRVNNDNRDE 522 Query: 387 QIGSQFAVADLLGFPLQVIVG 407 ++G + A L P Q+++G Sbjct: 523 KLGYRIREAQLKKIPYQLVLG 543 >gi|161614260|ref|YP_001588225.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194446059|ref|YP_002040590.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|198243456|ref|YP_002215793.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207857160|ref|YP_002243811.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|189083620|sp|A9N243|SYT_SALPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690315|sp|B5FJA8|SYT_SALDC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690400|sp|B5QVW8|SYT_SALEP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238693615|sp|B4T4M8|SYT_SALNS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161363624|gb|ABX67392.1| hypothetical protein SPAB_02005 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404722|gb|ACF64944.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197937972|gb|ACH75305.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|206708963|emb|CAR33293.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 642 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 611 >gi|15897489|ref|NP_342094.1| prolyl-tRNA synthetase [Sulfolobus solfataricus P2] gi|284174806|ref|ZP_06388775.1| prolyl-tRNA synthetase [Sulfolobus solfataricus 98/2] gi|74581610|sp|Q9UWX2|SYP_SULSO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|6015904|emb|CAB57731.1| prolyl (glutamyl) tRNA synthetase [Sulfolobus solfataricus P2] gi|13813734|gb|AAK40884.1| Prolyl -tRNA synthetase (proS) [Sulfolobus solfataricus P2] gi|261602249|gb|ACX91852.1| prolyl-tRNA synthetase [Sulfolobus solfataricus 98/2] Length = 481 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 8/164 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + + G +S + + DG Y SYGI R VA+VI D G Sbjct: 222 GRAMQIGTVHHLGQNFSKALDFKIQKKDGSLDYPHQTSYGISD-RAVASVIAIHGDDHGP 280 Query: 339 IWPDSVAPFKISLINIKAHD-----QVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQF 392 + P SVAP K+ +I I A + QV + + E I +K D E+ G +F Sbjct: 281 VLPPSVAPIKVVVIPIPAKNEEETQQVMKYSIE-ICEMFNKNNITCLTDQDTEKTPGEKF 339 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + ++ G P+++ +G + + V IK R + EE IN Sbjct: 340 YIWEIKGVPIRLEIGPRELISGTVFIKRRDNFKSYTVRKEEAIN 383 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 10/175 (5%) Query: 26 MLRTGMIHQHS----KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +LR G + + KG+ W+P G K N+ IIR + TG E+ P L DL Sbjct: 19 VLREGEFYDYGRYPIKGMGVWMPYGFKLRQNIIGIIRNFLDSTGHEEVLFPLLIPEDLLR 78 Query: 82 -ESGRYDSYGKEMLRLADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 ES + +E+ + D + PT E +T + +KSY+ LP +YQI Sbjct: 79 RESTHIKGFEEEVFWVTKGGSTDLDVKLALRPTSEVAITTMENLWLKSYKQLPKKYYQIV 138 Query: 137 LKFRDELRPRFGVMRSREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FR E + ++R RE K+A++ T + ++ + Y +IF L + Sbjct: 139 SVFRYETKATRPMIRLREITTFKEAHTVHETYDDAQKQVEEAIEIYKKIFDTLTI 193 >gi|330752453|emb|CBL87403.1| threonyl-tRNA synthetase [uncultured Flavobacteria bacterium] Length = 646 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 88/449 (19%), Positives = 169/449 (37%), Gaps = 63/449 (14%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L T + +G+ WLP G + +++ Q + Sbjct: 229 KEHLALLEEAKKRDHRKLGKQLELFT-FSKKVGQGLPLWLPNGAALRSRLEDFLKKAQVK 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD--RNDKAMIYGPTHEEVMTDIFRSH 121 G +S P + +L+V SG Y+ YG++ + + + ++ + P + +I+ Sbjct: 288 AGYEMVSTPHIGQKELYVTSGHYEKYGEDSFQPIETPKAEEEFLLKPMNCPHHCEIYNFK 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY+ LP + + +R E G+ R R F DA+ F TP+ + + Sbjct: 348 PYSYKELPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CTPDQLDSEFKNVIDL 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 L +F LG ++ + + L D + + Sbjct: 407 VLYVFRSLGFENFTAQ--------------VSLRDPKTPEKYIGS--------------- 437 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT 292 V+ W A + +K D + E + G + +G + GT Sbjct: 438 --------VDNWDKSEKAIINAAEDKGLDYVIETGEAAFYGPKLDFMVKDALGRSWQLGT 489 Query: 293 ---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 Y+LP T+KGAD + H V + G++ A++ G +W + P Sbjct: 490 IQVDYNLPERFDLTYKGADNESHRPVMIHRAPFGSLERFVAILLEHTAGNFPLW---LMP 546 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 ++ ++ I + +K+ L DD E +G + A++ P +IV Sbjct: 547 QQVVILTISEN---YEKYAQKVLNLLEINEIRGLIDDRSETMGKKIRDAEIKKIPYMIIV 603 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + + + ++ ++SLE + Sbjct: 604 GEQEEKSATLSVRQHGGEDLGNLSLEAFV 632 >gi|222445506|ref|ZP_03608021.1| hypothetical protein METSMIALI_01146 [Methanobrevibacter smithii DSM 2375] gi|222435071|gb|EEE42236.1| hypothetical protein METSMIALI_01146 [Methanobrevibacter smithii DSM 2375] Length = 608 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 95/426 (22%), Positives = 161/426 (37%), Gaps = 88/426 (20%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP----------TLQSADLWVESGRYD 87 G W P G+ D + + GA+ + P + +A R D Sbjct: 215 GNLKWFPKGRLVRDLLADYVYNLVVDQGAMPIETPIFYDLDNEAINVHAAKFGERQYRTD 274 Query: 88 SYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQL-KFRDELRPR 146 + MLR A +G VM D F + ++NLP Y++ FR E + Sbjct: 275 TKKNLMLRFA------CCFGAFR--VMADPFIT----WKNLPAKLYELSTYSFRFEKKGE 322 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+ R R F M D +SF + ++K M ++G + D Sbjct: 323 VVGLKRLRAFTMPDFHSFCADMNSTLEEFSK---------------QTDMCIQTG-VDLD 366 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 +++E I A +KDF D EN ++W Y+ + Sbjct: 367 VNYEIIFRA---------TKDFYD-----EN-------------KEWM--YSIGKKIGKP 397 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLP-----------MSATFKGADGKDHY-VQ 313 L + LPE K + I+ I Y G P T+ G DGK+HY Sbjct: 398 VLLEILPERKHYWSCKIDFAAIDYLGRPIENPTVQIDVESGKRFDITYLGEDGKEHYPTI 457 Query: 314 MGSYGIGAM-RVVAAVIESSH---DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G++ RV+ +++E + D K + P ++P ++ +I + D +D ++Y Sbjct: 458 LHCSPTGSIERVICSLLEKTAIELDEKAPMLPTWLSPIEVRIITV-GEDH--KDFANELY 514 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +++ V DD E +G + A P +VG + R TG + DM Sbjct: 515 DKINAENIRVDVDDRDESVGKKIRNAATEWIPYIFVVGDNEKESGVFSVTVRETGEKVDM 574 Query: 430 SLEEVI 435 +++E+I Sbjct: 575 TVDELI 580 >gi|330816669|ref|YP_004360374.1| Threonyl-tRNA synthetase [Burkholderia gladioli BSR3] gi|327369062|gb|AEA60418.1| Threonyl-tRNA synthetase [Burkholderia gladioli BSR3] Length = 635 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 15/164 (9%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + + H + S G+ W P G V +R N Sbjct: 231 YLHMLEE----AEKRDHRKLAKQLDLFHMQEESPGMVFWHPKGWTLWQQVEQYMRRRVNE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAM--IYGPTHEEVMTDIFRS 120 G +E+ P + LW SG + +Y + M +++ D A+ + P H +F Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGH----VQVFNH 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 ++SYR+LP + + R+E G+MR R F+ DA+ F Sbjct: 343 GLRSYRDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIF 386 >gi|284919690|emb|CAX65467.1| hypothetical protein [Enterobacter hormaechei] Length = 662 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 5/193 (2%) Query: 13 ENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 E +AE H+ + R + H ++ G W P G ++ A +R G +E+ Sbjct: 255 EKTAEAEKRDHRKLGRELDLFHFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEV 314 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 + P + LW SG +D+Y M + + P + +F+ IKSYR+LP Sbjct: 315 NTPDVMDRSLWEISGHWDNYRDHMFTTQTEDGRNFALKPMNCPGAVSLFKYGIKSYRDLP 374 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + R E G++R R F DA+ F T + + + L I+ + Sbjct: 375 VRLSEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIF-CTLQQVEGECKSILQLVLDIYKQF 433 Query: 189 GLKSIPMRAESGP 201 G + + ++ + P Sbjct: 434 GFEEVAIKLSTRP 446 >gi|62179922|ref|YP_216339.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|168263848|ref|ZP_02685821.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463268|ref|ZP_02697199.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|73919823|sp|Q57PV3|SYT_SALCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|62127555|gb|AAX65258.1| threonine tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|195634423|gb|EDX52775.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205347615|gb|EDZ34246.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|322714388|gb|EFZ05959.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 642 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 611 >gi|320451414|ref|YP_004203510.1| threonyl-tRNA synthetase [Thermus scotoductus SA-01] gi|320151583|gb|ADW22961.1| threonyl-tRNA synthetase [Thermus scotoductus SA-01] Length = 659 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 6/161 (3%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM-- 93 KG+ WLP G + + A +REEQ R G ++ P + S +L+ SG Y Y + Sbjct: 270 GKGLVLWLPKGNVIREELMAFMREEQIRRGYQLVTTPHIGSLELYRTSGHYPYYAESQFP 329 Query: 94 -LRLADR-NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVM 150 + +R ++ + P + I+ +SYR LP + +R E G+ Sbjct: 330 PISFKERGEEEEYLLKPMNCPHHIRIYAFKKRSYRELPLRLAEFGTVYRYEKAGELLGLT 389 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 R R F DA+ F TPE K + + L++ LGLK Sbjct: 390 RVRGFTQDDAHLF-CTPEQVKEEFLGVLDLVLKVLSTLGLK 429 >gi|237796784|ref|YP_002864336.1| prolyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] gi|259511585|sp|C3KUV8|SYP_CLOB6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|229260679|gb|ACQ51712.1| proline--tRNA ligase [Clostridium botulinum Ba4 str. 657] Length = 478 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/357 (19%), Positives = 139/357 (38%), Gaps = 77/357 (21%) Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--L 137 WV G D LA+R + PT E + + + ++SY++LP + Q + Sbjct: 97 WVTHGGDDE-------LAER----LCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVV 145 Query: 138 KFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 ++ RP +R+ EFL ++ ++ T E ++ K+ Y R+ Sbjct: 146 RWEKTTRP---FLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCE----------- 191 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 D+ +V+ E + F D D ++ S++ A A Sbjct: 192 -------DMLAMPVVMGKKTEKEKFAGAD--------------DTYTIESLMHDGKALQA 230 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 TS Y G +S + F +GK Y ++ Sbjct: 231 GTS---------------------------HYLGQNFSKAFAIQFSDRNGKLEYPHYTTW 263 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 + R++ A+I D G+ P +AP + +I + H + + +++ RL+KV Sbjct: 264 AV-TTRLIGAIIMVHGDDSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAKELKERLAKV-V 321 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V DD + G +++ ++ G PL++ +G K + ++ + R + +SL+E+ Sbjct: 322 RVKLDDSDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEI 378 >gi|182419388|ref|ZP_02950640.1| threonyl-tRNA synthetase [Clostridium butyricum 5521] gi|237666667|ref|ZP_04526652.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376719|gb|EDT74291.1| threonyl-tRNA synthetase [Clostridium butyricum 5521] gi|237657866|gb|EEP55421.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 643 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 6/188 (3%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL L+E RD +L L T + +G+ +P G K + + + +E+ + G Sbjct: 229 FLEALEEAKKRDHNKLGRELKLFT-TDEKVGQGLPLLMPKGAKIVQTLQRWVEDEEEKRG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD--RNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +DL+ SG +D Y M L D ++D+ P I+ + Sbjct: 288 YVLTKTPLMAKSDLYKVSGHWDHYKDGMFVLGDEEKDDEVFALRPMTCPFQYTIYNAEQH 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + FR+E G++R R+F + D + +TPE + + + Sbjct: 348 SYRDLPIRYAETSTLFRNEASGEMHGLIRVRQFTLADGHLI-VTPEQLEEEFKGVVELIQ 406 Query: 183 RIFHRLGL 190 + LG+ Sbjct: 407 YLMETLGI 414 >gi|254252558|ref|ZP_04945876.1| Threonyl-tRNA synthetase [Burkholderia dolosa AUO158] gi|124895167|gb|EAY69047.1| Threonyl-tRNA synthetase [Burkholderia dolosa AUO158] Length = 635 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 8/136 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSF 163 G+MR R F+ DA+ F Sbjct: 371 GLMRVRGFVQDDAHIF 386 >gi|256394768|ref|YP_003116332.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] gi|256360994|gb|ACU74491.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] Length = 409 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 55/127 (43%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G V IR + R G + P L +L+ SG + Y ++M Sbjct: 27 GLPYWLPDGAVVRHAVEEYIRSVERRAGYQHVYSPVLGKRELYEISGHWSHYSEDMFPPM 86 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + M+ P+ I+RS SYR LP +I FR E+ G+ R R Sbjct: 87 DLGAEQMVLRPSLCPTHALIYRSRAHSYRELPLRMAEIGGMFRSEMSGALGGLTRVRAIT 146 Query: 157 MKDAYSF 163 + DA+ F Sbjct: 147 LNDAHIF 153 >gi|16760562|ref|NP_456179.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141677|ref|NP_805019.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|167552305|ref|ZP_02346058.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168239001|ref|ZP_02664059.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168821978|ref|ZP_02833978.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194736705|ref|YP_002114350.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251550|ref|YP_002146704.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|200390235|ref|ZP_03216846.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927743|ref|ZP_03218944.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213423451|ref|ZP_03356434.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426331|ref|ZP_03359081.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213852224|ref|ZP_03381756.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238910851|ref|ZP_04654688.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|22654121|sp|Q8Z6I2|SYT_SALTI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690055|sp|B5F7G2|SYT_SALA4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238693694|sp|B4TUF0|SYT_SALSV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|25292951|pir||AC0706 threonine-tRNA ligase (EC 6.1.1.3) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502858|emb|CAD02020.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137305|gb|AAO68868.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194712207|gb|ACF91428.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197215253|gb|ACH52650.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197288252|gb|EDY27637.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199602680|gb|EDZ01226.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323085|gb|EDZ08281.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323017|gb|EDZ10856.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205341550|gb|EDZ28314.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086187|emb|CBY95961.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322620023|gb|EFY16896.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622333|gb|EFY19178.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627857|gb|EFY24647.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633045|gb|EFY29788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636709|gb|EFY33412.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641265|gb|EFY37906.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645254|gb|EFY41783.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650195|gb|EFY46609.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655769|gb|EFY52071.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660095|gb|EFY56334.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665338|gb|EFY61526.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669596|gb|EFY65744.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673522|gb|EFY69624.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677448|gb|EFY73512.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679887|gb|EFY75926.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687359|gb|EFY83331.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192477|gb|EFZ77707.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198668|gb|EFZ83769.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204096|gb|EFZ89110.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208715|gb|EFZ93653.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210228|gb|EFZ95127.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217691|gb|EGA02406.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220245|gb|EGA04700.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223489|gb|EGA07815.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229493|gb|EGA13616.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232716|gb|EGA16812.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240245|gb|EGA24289.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242767|gb|EGA26788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249083|gb|EGA33002.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254416|gb|EGA38233.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255600|gb|EGA39356.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260123|gb|EGA43748.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267113|gb|EGA50598.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271563|gb|EGA54984.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 642 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 611 >gi|229133217|ref|ZP_04262049.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228650236|gb|EEL06239.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196] Length = 639 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE QN E+ P + + +LW +SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMNQELWEKSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ + K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDHKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|151943962|gb|EDN62255.1| conserved protein [Saccharomyces cerevisiae YJM789] gi|190405804|gb|EDV09071.1| hypothetical protein SCRG_04726 [Saccharomyces cerevisiae RM11-1a] gi|207344767|gb|EDZ71797.1| YHR020Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|259147048|emb|CAY80303.1| EC1118_1H21_0848p [Saccharomyces cerevisiae EC1118] gi|323308880|gb|EGA62116.1| YHR020W-like protein [Saccharomyces cerevisiae FostersO] gi|323348347|gb|EGA82595.1| YHR020W-like protein [Saccharomyces cerevisiae Lalvin QA23] gi|323354780|gb|EGA86614.1| YHR020W-like protein [Saccharomyces cerevisiae VL3] Length = 688 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/338 (20%), Positives = 135/338 (39%), Gaps = 70/338 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + ++SYR+LP Q R E + +R+REFL ++ ++ LT Sbjct: 291 PTSETVMYPYYAKWVQSYRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTAHLTA 350 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + ++ ++ Y ++ L ++P +V E + F DF Sbjct: 351 KDAEEEVLQILDFYAGVYEE--LLAVP----------------VVKGRKTEKEKFAGGDF 392 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + E + +P+ + RGI+ Sbjct: 393 ------------------TTTCEGY------------------IPQ----TGRGIQGATS 412 Query: 288 FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 + G +S + + + G DH + S+G+ + RV+ ++ D KG++ P V Sbjct: 413 HHLGQNFSKMFNLSVENPLGSDHPKIFAYQNSWGL-STRVIGVMVMIHSDNKGLVIPPRV 471 Query: 345 APFKISLINIKAHDQVCRDACEKIY-------ARLSKVGCDVFWD-DMGEQIGSQFAVAD 396 + F+ +I + + + + I+ +RL KVG F D + G +F+ + Sbjct: 472 SQFQSVVIPVGITKKTSEEQRKHIHETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYE 531 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L G P+++ +G K + ++V + R + +S +E+ Sbjct: 532 LKGIPIRIELGPKDIEKNQVVVVRRNDSKKYVVSFDEL 569 >gi|47220916|emb|CAG03123.1| unnamed protein product [Tetraodon nigroviridis] Length = 822 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 87/404 (21%), Positives = 157/404 (38%), Gaps = 58/404 (14%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA 103 P G D V + +EE R G E++ P + + LW SG + YG M D Sbjct: 447 PAGCGVADGV-WLFQEEYWRRGFQEVATPNIYNRKLWETSGHWQHYGHNMFSFPVEED-V 504 Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYS 162 P + +F +S+R LP + R+EL G+ R R F DA+ Sbjct: 505 FALKPMNCPGHCLVFSQRPRSWRELPLRLADFGVLHRNELSGTLTGLTRVRRFQQDDAHI 564 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSHEFIVLADTGETQ 220 F + S K + +LR +++ S + + P GD I + + E Q Sbjct: 565 FCTVEQ--IESEMKGCLDFLRCVYKVFGFSFQLHLSTRPEKFLGD-----IAVWNQAEKQ 617 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDVHNEKLFDSLPEN 274 + SLN E W A Y D+ K+ D++ Sbjct: 618 L--------------------ESSLNQFGEPWKLNPGDGAFYGPKIDI---KIQDAIGRY 654 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESS 332 + + ++ F +++L TF G DG D V + +G++ + A++ + Sbjct: 655 HQCATVQLD----FQLPLRFNL----TFVGKDGDDRGQPVIIHRAVLGSVERMVAILTEN 706 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQ 391 + GK WP ++P ++ ++ + + C D K+ + ++ G D D G + + Sbjct: 707 YAGK---WPLWLSPRQVMVVPV---NPACEDYARKVCKQFTEAGLMADVDLDSGCLLNRK 760 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A L + ++VG K + V ++ R + ++ EV+ Sbjct: 761 IRNAQLAQYNFILVVGEKEKMTNSVNVRTRDNKVHGELPAAEVL 804 >gi|210616985|ref|ZP_03291320.1| hypothetical protein CLONEX_03542 [Clostridium nexile DSM 1787] gi|210149508|gb|EEA80517.1| hypothetical protein CLONEX_03542 [Clostridium nexile DSM 1787] Length = 480 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/185 (22%), Positives = 86/185 (46%), Gaps = 7/185 (3%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA-----RGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 P+ + NEK F + V A + ++ +FG + + + + + Sbjct: 197 PFVSGRKAENEK-FAGAQDTYTVEALMHDGKALQSATSHFFGNGFPDAFNIKYIDKNNQP 255 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 H V S+G+ + R++ A+I D G++ P +AP + +I I H + + +++ Sbjct: 256 HSVYETSWGL-STRIIGAIIMVHGDDDGLVLPPRIAPVQTRVIPIAQHKEGVLEKADELL 314 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A L G DD + G +F+ ++LG P ++ +G K + ++V + R T + + Sbjct: 315 AALKAAGYRAKIDDSEKSPGWKFSEQEILGIPTRIEIGPKDIEKNQVVVVRRDTREKIVV 374 Query: 430 SLEEV 434 S++E+ Sbjct: 375 SIDEI 379 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 10/152 (6%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLR 95 KG ++LP G +N+ + TG +S+P L L + G + + + E+ Sbjct: 38 KGCLNYLPNGYAIWENIQRDLDARFKETGVENVSLPMLIPESLLEKEGDHIEGFAPEVAW 97 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + +R + + PT E + D++ ++S+R+LP + Q L++ RP Sbjct: 98 VTHGGMERLQERLCIRPTSETLFCDLWSKMVRSHRDLPKVWNQWNSVLRWEKTTRP---F 154 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +RSREFL ++ ++ T E ++ M Y Sbjct: 155 LRSREFLWQEGHTIHATYEEAEQRTLTMLKVY 186 >gi|160936998|ref|ZP_02084362.1| hypothetical protein CLOBOL_01887 [Clostridium bolteae ATCC BAA-613] gi|158440188|gb|EDP17935.1| hypothetical protein CLOBOL_01887 [Clostridium bolteae ATCC BAA-613] Length = 636 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 93/402 (23%), Positives = 151/402 (37%), Gaps = 51/402 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + G +LP G + + RE R G E+S P + S LW SG +D Y Sbjct: 255 MFAEEGPGFPFFLPKGMTLKNTLIDYWREIHYRDGYQEVSTPIILSRKLWENSGHWDHYK 314 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M + D D A+ P + ++++ SYR+LP ++ L R E + G Sbjct: 315 DNMYTTVIDEEDYAV--KPMNCPGGMLVYKNQPHSYRDLPLKVGELGLVHRHEKSGQLHG 372 Query: 149 VMRSREFLMKDAYSF--DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 +MR R F DA+ F D E K+ F + R E +G D Sbjct: 373 LMRVRCFTQDDAHIFMRDDQIEDQIKGVTKLINEVYTQFGFEYFVELSTRPEDS-MGSDE 431 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E +A G + E+ D I++ E A Y D H Sbjct: 432 DWE---MATNGLRKAL------------EDMGLDYIVN-----EGDGAFYGPKIDFH--- 468 Query: 267 LFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAM 322 L DSL R + G I F ++ L +A DG K + + G++ Sbjct: 469 LRDSL-------GRTWQCGTIQLDFQMPQRFDLEYTAE----DGSKKRPIMIHRVCFGSI 517 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ GK +W +AP ++ +I + + D +Y +L G D Sbjct: 518 ERFIGILIEHFAGKFPVW---LAPVQVKVIPV---SEKSMDYATGVYEKLKAAGIRTELD 571 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++G + A L P +++G K ++ + ++ R G Sbjct: 572 HKDEKVGYKIRQAQLEKVPYMLVLGEKEAAEGAITVRSRDKG 613 >gi|163940157|ref|YP_001645041.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|163862354|gb|ABY43413.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] Length = 639 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE QN E+ P + + +LW +SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMNQELWEKSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ + K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDHKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|332306910|ref|YP_004434761.1| threonyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174239|gb|AEE23493.1| threonyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 638 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/419 (20%), Positives = 155/419 (36%), Gaps = 44/419 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W G + +R + E+ P + LW +SG +D Y + Sbjct: 257 QEEAPGMVFWHNDGWSIYTELEKFVRSKLREYEYQEVKAPLMMDRSLWEKSGHWDKYAEN 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + IF +KSYR+LP + R+E G+MR Sbjct: 317 MFTTTSEKREYAV-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALHGLMR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F T + S I+ G ++I ++ + P S E Sbjct: 376 VRGFTQDDAHIF-CTEDQILAEVGGCIDSVYEIYKIFGFENISVKLSTRPEKRVGSDEVW 434 Query: 212 VLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ + SK +DF +P E + I L D Sbjct: 435 DKAEKELAEALTSKG-IDFQYLPGEGAFYGPKIEFT--------------------LHDC 473 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 L R + G + +S+P + +T+ DG+ M I G++ Sbjct: 474 LD-------RAWQCGTV---QLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G +W +AP + ++NI + + +K+ +L ++G D E+ Sbjct: 524 ILIEEYSGFFPLW---LAPTQAVVMNITDNQS---EYAQKVVKKLKEIGIRAKSDLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 IG + L P ++VG K + ++ ++ R MS++ I A + + + Sbjct: 578 IGFKIREHTLRRVPYLLVVGDKEIEAGEIAVRSRKGDDLGKMSVDAFIELACEQIKSKQ 636 >gi|260591627|ref|ZP_05857085.1| threonine--tRNA ligase [Prevotella veroralis F0319] gi|260536427|gb|EEX19044.1| threonine--tRNA ligase [Prevotella veroralis F0319] Length = 649 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 90/416 (21%), Positives = 147/416 (35%), Gaps = 65/416 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R E+ P + +L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTQLRLRLQELLRRLLRPYNYQEVITPGIGGKNLYVTSGHYAHYGKDAFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + +++ +SY++LP + FR E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + P+ K + L++F G + + I L Sbjct: 383 TFTQDDAHIF-VRPDQVKAEFETNIDIILKVFATFGFDNYEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D E W AA EK + E Sbjct: 428 RDPNDKEKYIGSD-----------------------EVWEESEAAIKAACEEKGLKARVE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 LGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNTKKTPVMIHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ AV+ G +W PD VA IS + D K+ A Sbjct: 525 GSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYARKVKAYFDAHDV 576 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 DD E+IG + +L P VIVG K + V ++ + G + M++EE Sbjct: 577 RSIMDDRNEKIGRKIRDNELKRVPYMVIVGEKEAAQGLVSMRQQGGGEQATMTMEE 632 >gi|16764684|ref|NP_460299.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991842|ref|ZP_02572941.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168244449|ref|ZP_02669381.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448321|ref|YP_002045340.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197262906|ref|ZP_03162980.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|22654123|sp|Q8ZPS9|SYT_SALTY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690646|sp|B4TGH1|SYT_SALHS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|16419852|gb|AAL20258.1| threonine tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194406625|gb|ACF66844.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197241161|gb|EDY23781.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205329759|gb|EDZ16523.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205336802|gb|EDZ23566.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261246542|emb|CBG24352.1| ThrRS [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993213|gb|ACY88098.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157870|emb|CBW17364.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912318|dbj|BAJ36292.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223961|gb|EFX49024.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129604|gb|ADX17034.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988221|gb|AEF07204.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 642 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 611 >gi|84687895|ref|ZP_01015762.1| threonyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84664089|gb|EAQ10586.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654] Length = 649 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 90/422 (21%), Positives = 153/422 (36%), Gaps = 56/422 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q R G +E++ P + LW SG ++ Y + Sbjct: 261 MQEEAPGQVFWHPNGWTIYTVLQDYMRRQQQRGGYVEVNTPQVVDRKLWEASGHWEKYQE 320 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF +KSYR+LP + R E Sbjct: 321 NMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNVGLKSYRDLPLRMAEFGSCNRYEPSGA 380 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGG 204 G+MR R F DA+ F E S + F+S+L I+ LG + ++ P Sbjct: 381 LHGIMRVRGFTQDDAHIF--CTEDQIESETERFISFLAGIYKDLGFPTYKIKFSDRP--- 435 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 A + E K +D A + T+DV Sbjct: 436 ------DTRAGSDEIWDKAEKALLD------------------------ATHKVTNDVEL 465 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYG 318 + K +G + GT + LP + A + G DG H V + Sbjct: 466 NPGEGAFYGPKLEFVLTDAIGRDWQCGTLQVDFVLPERLDANYIGEDGAKHRPVMLHRAT 525 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGC 377 +G+ ++ H GK W +AP ++ + +I + D R+ + + A+ G Sbjct: 526 LGSFERFIGILIEEHAGKLPFW---IAPRQVVVASIVSDADDYVREVVDALRAK----GV 578 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D E+I + P+ + +G K V D V ++ ++L+EV+ Sbjct: 579 RAEADTRNEKINYKVREHSAGKVPVILAIGMKEVEDRTVTLRRLGEKQTRVVALDEVVQE 638 Query: 438 AS 439 S Sbjct: 639 LS 640 >gi|297564570|ref|YP_003683542.1| prolyl-tRNA synthetase [Meiothermus silvanus DSM 9946] gi|296849019|gb|ADH62034.1| prolyl-tRNA synthetase [Meiothermus silvanus DSM 9946] Length = 477 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 5/149 (3%) Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 YFG K+S F+ D + Y S+G + R + A++ + D KG+I P +AP + Sbjct: 231 YFGQKFSRAFEIKFQDKDLQTKYAYTTSWGF-STRAIGAIVMTHGDDKGLILPPKLAPIQ 289 Query: 349 ISLINIKAHDQVCR--DACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVI 405 + ++ I D + A E + L G V DD + G +F +L G P ++ Sbjct: 290 VVVVPIYKEDTRAKVLAAAEGLAQALKAAGIRVHLDDRDQYSPGFKFNEWELKGVPFRLE 349 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G + V + RL G +E + +EE+ Sbjct: 350 LGPRDVDAQTAVLASRLGG-KETVPMEEI 377 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ S IKSYR+LP Q R ELR + +R+ EFL ++ ++ T Sbjct: 110 PTSETIIGHMWASWIKSYRDLPQLLNQWNSVVRWELRTKL-FLRTSEFLWQEGHTAHATQ 168 Query: 168 EGSKHSYNKMFVSYLRIF 185 E ++ +M Y + Sbjct: 169 EEAEEETRRMLDIYATVL 186 >gi|163801061|ref|ZP_02194961.1| threonyl-tRNA synthetase [Vibrio sp. AND4] gi|159175410|gb|EDP60207.1| threonyl-tRNA synthetase [Vibrio sp. AND4] Length = 642 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ +R + + G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFVRSKLDEYGYQEVKGPLIMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M A N + P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTASEN-REYALKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + G +I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTESQIQEEVTSCIKMVYDTYQTFGFDNIVVKLSTRPEQRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S + M+ P I E A Y + L Sbjct: 433 ----EIWDQSEEALKQSLESMEIPY--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + L+NI D +++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAILMNITDKQS---DYVQEVVQKLQKSGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + ++ ++ R Sbjct: 576 NEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTR 612 >gi|298530062|ref|ZP_07017464.1| threonyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298509436|gb|EFI33340.1| threonyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 646 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 87/388 (22%), Positives = 161/388 (41%), Gaps = 53/388 (13%) Query: 58 REEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDI 117 R+E R G + P + +LW +SG YD+Y +E + +++ P + I Sbjct: 282 RKEHLRRGYQIVQGPQILRRELWEKSGHYDNY-RENMYFTHIDEQVYGVKPMNCLSHMLI 340 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 ++S ++SYR+LP ++++ R E G++R REF DA+ P+ + Sbjct: 341 YKSKLRSYRDLPLRYFELGRVHRHEKSGVLHGLLRVREFTQDDAHIL-CRPDQLQDEITG 399 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + V+++R + G E++V T + S + + + Sbjct: 400 V-VNFVR-----------------DVMGLFGFEYVVEVSTRPEKHIGSSEAWEKSTRALT 441 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + D + I A Y D+ KL D+L + + V F ++ L Sbjct: 442 SALDALDMPYEINPGDGAFYGPKIDI---KLKDALDRKWQCAT----VQCDFTLPERFDL 494 Query: 297 PMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 T+ G DG+ + V + +GA+ R + +IE G +P +AP + ++NI Sbjct: 495 ----TYTGEDGRKYRPVMLHRVVLGAIERFLGVLIEHY----GGAFPTWLAPVQARIMNI 546 Query: 355 K------AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 HD C D R ++G V DD E++G + A + P ++ G Sbjct: 547 TDAQAGYVHD--CAD-------RFRQMGIRVEVDDRNEKLGYKVREAQMEKIPYVLVAGD 597 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + V +S + ++ R MS++EV + Sbjct: 598 QEVQESGLNVRLRGGKNLGLMSIQEVAD 625 >gi|157145208|ref|YP_001452527.1| hypothetical protein CKO_00941 [Citrobacter koseri ATCC BAA-895] gi|157082413|gb|ABV12091.1| hypothetical protein CKO_00941 [Citrobacter koseri ATCC BAA-895] Length = 652 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 5/193 (2%) Query: 13 ENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 E +AE H+ + R + H ++ G W P G ++ A +R G +E+ Sbjct: 245 EKTAEAEKRDHRKLGRELDLFHFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEV 304 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 + P + LW SG +D+Y M + + P + +F+ IKSYR+LP Sbjct: 305 NTPDVMDRSLWEISGHWDNYRDHMFTTQTEDGRNFALKPMNCPGAVSLFKYGIKSYRDLP 364 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + R E G++R R F DA+ F T + + + L I+ + Sbjct: 365 VRLSEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIF-CTLQQVEGECKSILQLVLDIYKQF 423 Query: 189 GLKSIPMRAESGP 201 G + + ++ + P Sbjct: 424 GFEEVAIKLSTRP 436 >gi|172060451|ref|YP_001808103.1| threonyl-tRNA synthetase [Burkholderia ambifaria MC40-6] gi|238689138|sp|B1YP13|SYT_BURA4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|171992968|gb|ACB63887.1| threonyl-tRNA synthetase [Burkholderia ambifaria MC40-6] Length = 635 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 8/136 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R N G +E+ P + LW SG + +Y + Sbjct: 255 MQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSF 163 G+MR R F+ DA+ F Sbjct: 371 GLMRVRGFVQDDAHIF 386 >gi|203288149|ref|YP_002223164.1| threonyl-tRNA synthetase [Borrelia recurrentis A1] gi|238690577|sp|B5RQ59|SYT_BORRA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|201085369|gb|ACH94943.1| threonyl-tRNA synthetase [Borrelia recurrentis A1] Length = 583 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 83/415 (20%), Positives = 164/415 (39%), Gaps = 48/415 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G + + REE + G + P + + LW SG D Y + M Sbjct: 205 GLIFFHPHGARIRALIENFWREEHFKNGYDILFTPHIGKSWLWETSGHLDFYKESMFEKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G MR R F Sbjct: 265 EMDRSDYYVKPMNCPFHIAIYNTDKHSYRDLPFRWAELGTVYRYEKIGAIHGTMRVRGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ T E ++ + ++++ G ++ + P +G D + V Sbjct: 325 QDDAHII-CTYEQVNFEVREVLRFAIDMWNKFGFTNLKAYLSTKPEKAVGDDDDWQMAVK 383 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 K +DF N DFD I E A Y D+ K+ DSL Sbjct: 384 V--------LEKALIDF-----NIDFD-------IDEGGGAFYGPKIDL---KIIDSL-- 418 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPM--SATFKGADGKDHYVQMGSYG-IGAMRVVAAVIE 330 R ++ I + ++LP+ T+ DGK+ M +G++ ++ Sbjct: 419 -----GRAWQMTTIQF---DFNLPVRFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILV 470 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIG 389 + G +W +AP ++ +I + + + + ++ +R G + +D+ ++ Sbjct: 471 EHYGGAFPVW---LAPLQVVIIPV---NSIVEEYALEVLSRFQNEGIRIKFDNYYNMRMN 524 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ P I+G + V + K+ I+ R + L+E + + + SN Sbjct: 525 AKIRQYQSKKVPYMFIIGEREVVEGKISIRTRTNEQINGLELKEALEFVKLKISN 579 >gi|168233251|ref|ZP_02658309.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472380|ref|ZP_03078364.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458744|gb|EDX47583.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332671|gb|EDZ19435.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 642 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 611 >gi|170755400|ref|YP_001782969.1| prolyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|259511587|sp|B1IFI2|SYP_CLOBK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169120612|gb|ACA44448.1| prolyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] Length = 478 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/358 (19%), Positives = 142/358 (39%), Gaps = 79/358 (22%) Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--L 137 WV G D LA+R + PT E + + + ++SY++LP + Q + Sbjct: 97 WVTHGGDDE-------LAER----LCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVV 145 Query: 138 KFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK-HSYNKMFVSYLRIFHRLGLKSIPMR 196 ++ RP +R+ EFL ++ ++ T E ++ HS + L ++ RL + M Sbjct: 146 RWEKTTRP---FLRTTEFLWQEGHTIHETKEEAESHS-----LKILNMYSRLCEDMLAMP 197 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 +V+ + + F D D ++ S++ Sbjct: 198 --------------VVMGKKTDKEKFAGAD--------------DTYTIESLMH------ 223 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 + ++ G Y G +S + F +GK Y + Sbjct: 224 ---------------------DGKALQAGTSHYLGQNFSKAFAIQFSDRNGKLDYPHYTT 262 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 + + R++ A+I D G+ P +AP + +I + H + + E++ RL+KV Sbjct: 263 WAV-TTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAEELKERLAKV- 320 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V DD + G +++ ++ G PL++ +G K + ++ + R + +SL+E+ Sbjct: 321 VRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEI 378 >gi|29829188|ref|NP_823822.1| prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680] gi|81838431|sp|Q82JV8|SYP2_STRAW RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA ligase 2; Short=ProRS 2 gi|29606294|dbj|BAC70357.1| putative prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680] Length = 471 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 85/439 (19%), Positives = 172/439 (39%), Gaps = 82/439 (18%) Query: 1 MRRSKYFLPILQENPR-------DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 M ++ P + PR AE+A + + T +I + G++ ++ + Sbjct: 1 MAKAPVLTPRADDFPRWYQDLINKAELADNGPVRGTMVIRPYGYGLW------ERMQQEM 54 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPT 109 +A I+E + + +P + L E+ + + E+ + K + + PT Sbjct: 55 DARIKETGTQNAYFPLLIP---QSYLTKEADHVEGFAPELAVVTHGGGKELEEPAVVRPT 111 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEG 169 E ++ D F ++SYR+LP Q R ELRPR +R+ EFL ++ ++ T E Sbjct: 112 SEMIINDYFSKWVQSYRDLPLLINQWANVVRWELRPRL-FLRTTEFLWQEGHTAHATYEE 170 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 ++ F +++ HR V+ DFM Sbjct: 171 ARD-----FAAHI---HR--------------------------------HVYA--DFM- 187 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 +++++++ ++ + TA V+ L + + K +++G Sbjct: 188 ----------ENVLAMDVVLGRKTAKERFAGAVNTLTLEGMMGDGK-----ALQMGTSHE 232 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G ++ + +GK V S+G R++ A++ D G+ P +A ++ Sbjct: 233 LGQNFARAFHTQYLSKEGKQELVWQTSWG-STTRMIGALVMMHGDDNGLRVPPRLAQTQV 291 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGS 408 ++ IK D+ + RL G V DD + G + +L G P++V VG Sbjct: 292 VVLAIKG-DEAVLAKVRETGDRLKAAGLRVQVDDRTDVPFGRRAVDWELKGVPVRVEVGP 350 Query: 409 KFVSDSKVEIKHRLTGIRE 427 + + + + R+ G +E Sbjct: 351 RDLENGTAMVARRIPGGKE 369 >gi|47221603|emb|CAF97868.1| unnamed protein product [Tetraodon nigroviridis] Length = 604 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 2/166 (1%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK L ++++ + I ++ + S G +LP G + + I+ E R Sbjct: 142 SKLRLQLIEDQTSGSSITVYRHDQELFFFNDVSPGSCFFLPKGAHIYNTLTDFIKGEYRR 201 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ PTL S LW SG ++ Y M + P + +F ++ Sbjct: 202 RGFTEVVTPTLYSTALWERSGHWEHYSDNMFTVTSEGSHTYALKPMNCPAHCLMFEQRVR 261 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 S++ LP + R+EL G+ R R F DA+ F PE Sbjct: 262 SWKELPLRWADFGALHRNELSGALGGLTRVRRFCQDDAHIF-CAPE 306 >gi|225028654|ref|ZP_03717846.1| hypothetical protein EUBHAL_02933 [Eubacterium hallii DSM 3353] gi|224954040|gb|EEG35249.1| hypothetical protein EUBHAL_02933 [Eubacterium hallii DSM 3353] Length = 591 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 97/422 (22%), Positives = 164/422 (38%), Gaps = 46/422 (10%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD +L L T I + G +LP G + + R+ R Sbjct: 182 KDYLNMLEEAKKRDHRKLGKELGLFT--IMEEGPGFPFFLPKGMILKNTLIDYWRKMHTR 239 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+S P L + LW SG +D Y +E + +D P + +++ + Sbjct: 240 EGYEEISTPILLNRQLWETSGHWDHY-RENMYTTVIDDMDFAVKPMNCPGGMLVYKMEPR 298 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ LP ++ L R E + G+MR R F DA+ F +T ++ K+ Sbjct: 299 SYKELPLRLGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIF-MTEAQIENEIQKVVKLID 357 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G + E+ V + E + IP E + D Sbjct: 358 EVYKKFGFTYHVELSTRPADSMGTEEEWEVATNALENAIKAMN------IPYEVNEGDG- 410 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSA 300 A Y D H L DS+ R + G I + LP A Sbjct: 411 -----------AFYGPKLDFH---LQDSI-------GRTWQCGTI---QLDFQLPQRFEA 446 Query: 301 TFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG+ H + + G++ ++ + GK +P +AP + ++ + D+ Sbjct: 447 EYIGADGEKHRPIMIHRVVFGSIERFIGILIEHYAGK---FPTWLAPVQAKVLPVS--DK 501 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D +++ L G V DD E++G + A L P +I+G K S V ++ Sbjct: 502 FA-DYAKQVAEALKASGVRVEVDDRDEKLGYKIRQAQLQKVPYMLILGEKEQSAGTVSVR 560 Query: 420 HR 421 R Sbjct: 561 KR 562 >gi|300716458|ref|YP_003741261.1| Threonyl-tRNA synthetase [Erwinia billingiae Eb661] gi|299062294|emb|CAX59411.1| Threonyl-tRNA synthetase [Erwinia billingiae Eb661] Length = 642 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 90/439 (20%), Positives = 160/439 (36%), Gaps = 50/439 (11%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + Y L + + RD +L L + + + G+ W G + +R + Sbjct: 230 AAYLLRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLTE 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW ++G +++Y + M + N + I P + IF +K Sbjct: 288 YDYQEVKGPLMMDRVLWEKTGHWENYKEAMFTTSSENREYCI-KPMNCPGHVQIFNQGLK 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F T E + N Sbjct: 347 SYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIF-CTEEQVRTEVNSCIRMVY 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDF 239 ++ G + I ++ + P+ + E D E + + D P P E + Sbjct: 406 DMYSTFGFEKIVVKLSTRPVKRIGTEE---QWDRAEADLAAALKENDIPFEYQPGEGAFY 462 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP-- 297 I L D L R + G + +SLP Sbjct: 463 GPKIEFT--------------------LHDCLD-------RAWQCGTV---QLDFSLPSR 492 Query: 298 MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 +SA++ G + + M I G++ ++ + G +P +AP ++ ++NI Sbjct: 493 LSASYIGENNERQVPVMIHRAILGSVERFIGILTEEYAG---FFPTWLAPVQVVVMNITD 549 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ +L G D E+IG + L P ++ G K V KV Sbjct: 550 GQS---EYVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKV 606 Query: 417 EIKHRLTGIREDMSLEEVI 435 ++ R M + EVI Sbjct: 607 AVRTRRGKDLGSMDVNEVI 625 >gi|216264494|ref|ZP_03436486.1| threonyl-tRNA synthetase [Borrelia burgdorferi 156a] gi|215980967|gb|EEC21774.1| threonyl-tRNA synthetase [Borrelia burgdorferi 156a] Length = 581 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 78/409 (19%), Positives = 159/409 (38%), Gaps = 51/409 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG D Y M Sbjct: 205 GLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 265 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGMMRARGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHE--FI 211 DA+ T ++ + ++ + G ++ + P +G D E Sbjct: 325 QDDAHII-CTHSQVLDEIKEVLRFAIYMWSKFGFSNLKAYLSTKPDKSVGNDSDWEMSLK 383 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 VL +T DF +P E I + A Y D+ K+ DSL Sbjct: 384 VLEET----------LSDFEVPYE------------IDKGGGAFYGPKIDL---KIVDSL 418 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAV 328 ++S + ++LP + T+ DGK+ M +G++ + Sbjct: 419 EREWQMSTIQFD----------FNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGI 468 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G +W ++P ++ +I + + + D K++ + G + D+ ++ Sbjct: 469 LVEHYGGAFPLW---LSPVQVVIIPV---NNIVEDYAIKVFNKFKNEGIRIKLDNSSSRM 522 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ P I+G + ++ ++ I+ R M L+E + + Sbjct: 523 NAKIREYQAKKIPYMFIIGEREATEERISIRTRTNEQINGMKLDEALKF 571 >gi|219666254|ref|YP_002456689.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] gi|219536514|gb|ACL18253.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] Length = 639 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 85/396 (21%), Positives = 152/396 (38%), Gaps = 51/396 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H G + P G + + R+E + G E+ P + S +LW SG +D Y K Sbjct: 256 LHDEGPGFPFFHPKGMVLRNQLEDFWRQEHRKRGYHEIKTPIILSRNLWENSGHWDHY-K 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 + + +D+ P + +++ ++SYR+LP ++ L R EL G++ Sbjct: 315 DNMYTTKIDDEDFAVKPMNCPGGMIMYKQKLRSYRDLPLRMGELGLVHRHELSGALNGLL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLS 207 R R F DA+ F + P K + + R + G + + R E+ +G D + Sbjct: 375 RVRNFTQDDAHIF-MLPSQIKAEISGVIDLVDRFYKVFGFEYHVELSTRPENS-MGADET 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E T Q +++ I + F Y D H L Sbjct: 433 WEMA----TNALQEALEAKGVNYKINPGDGAF----------------YGPKIDFH---L 469 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMR 323 D L R + G I F K+ L T+ G DG+ H V + G++ Sbjct: 470 RDCL-------GRTWQCGTIQLDFQMPEKFDL----TYIGEDGQKHRPVMIHRVVYGSIE 518 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 A++ + G +P +AP ++ ++ I + D + I RL+ + D+ Sbjct: 519 RFIALLTEHYAGA---FPTWLAPVQVRVLPISERHE---DYAQDIVRRLNDLDIRAEVDE 572 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E+I + A P ++VG + V ++ Sbjct: 573 RREKISYKIREAQTHKIPFALVVGDQEAETDTVAVR 608 >gi|261349933|ref|ZP_05975350.1| threonine--tRNA ligase [Methanobrevibacter smithii DSM 2374] gi|288860716|gb|EFC93014.1| threonine--tRNA ligase [Methanobrevibacter smithii DSM 2374] Length = 608 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 95/426 (22%), Positives = 161/426 (37%), Gaps = 88/426 (20%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP----------TLQSADLWVESGRYD 87 G W P G+ D + + GA+ + P + +A R D Sbjct: 215 GNLKWFPKGRLVRDLLADYVYNLVVDQGAMPIETPIFYDLDNEAINVHAAKFGERQYRTD 274 Query: 88 SYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQL-KFRDELRPR 146 + MLR A +G VM D F + ++NLP Y++ FR E + Sbjct: 275 TKKNLMLRFA------CCFGAFR--VMADPFIT----WKNLPAKLYELSTYSFRFEKKGE 322 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+ R R F M D +SF + ++K M ++G + D Sbjct: 323 VVGLKRLRAFTMPDFHSFCADMNSTLEEFSK---------------QTDMCIQTG-VDLD 366 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 +++E I A +KDF D EN ++W Y+ + Sbjct: 367 VNYEIIFRA---------TKDFYD-----EN-------------KEWM--YSIGKKIGKP 397 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLP-----------MSATFKGADGKDHY-VQ 313 L + LPE K + I+ I Y G P T+ G DGK+HY Sbjct: 398 VLLEILPERKHYWSCKIDFAAIDYLGRPIENPTVQIDVESGKRFDITYLGEDGKEHYPTI 457 Query: 314 MGSYGIGAM-RVVAAVIESSH---DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G++ RV+ +++E + D K + P ++P ++ +I + D +D ++Y Sbjct: 458 LHCSPTGSIERVICSLLEKTAIELDEKAPMLPTWLSPIEVRIITV-GEDH--KDFANELY 514 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +++ V DD E +G + A P +VG + R TG + DM Sbjct: 515 DKINAENIRVDVDDRDESVGKKIRNAATEWIPYIFVVGDNEKESGVFSVTVRETGEKVDM 574 Query: 430 SLEEVI 435 +++E+I Sbjct: 575 TVDELI 580 >gi|204636657|gb|ACI01751.1| putative threonyl-tRNA synthetase [Escherichia coli] Length = 652 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 5/193 (2%) Query: 13 ENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 E +AE H+ + R + H ++ G W P G ++ A +R G +E+ Sbjct: 245 EKTAEAEKRDHRKLGRELDLFHFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEV 304 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 + P + LW SG +D+Y M + + P + +F+ IKSYR+LP Sbjct: 305 NTPDVMDRSLWEISGHWDNYRDHMFTTQTEDGRNFALKPMNCPGAVSLFKYGIKSYRDLP 364 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + R E G++R R F DA+ F T + + + L I+ + Sbjct: 365 VRLSEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIF-CTLQQVEGECKSILQLVLDIYKQF 423 Query: 189 GLKSIPMRAESGP 201 G + + ++ + P Sbjct: 424 GFEEVAIKLSTRP 436 >gi|153938581|ref|YP_001392690.1| prolyl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|171769234|sp|A7GIT0|SYP_CLOBL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152934477|gb|ABS39975.1| proline--tRNA ligase [Clostridium botulinum F str. Langeland] gi|295320672|gb|ADG01050.1| proline--tRNA ligase [Clostridium botulinum F str. 230613] gi|322807661|emb|CBZ05236.1| prolyl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 478 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/358 (19%), Positives = 142/358 (39%), Gaps = 79/358 (22%) Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--L 137 WV G D LA+R + PT E + + + ++SY++LP + Q + Sbjct: 97 WVTHGGDDE-------LAER----LCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVV 145 Query: 138 KFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK-HSYNKMFVSYLRIFHRLGLKSIPMR 196 ++ RP +R+ EFL ++ ++ T E ++ HS + L ++ RL + M Sbjct: 146 RWEKTTRP---FLRTTEFLWQEGHTIHETKEEAESHS-----LKILNMYSRLCEDMLAMP 197 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 +V+ + + F D D ++ S++ Sbjct: 198 --------------VVMGKKTDKEKFAGAD--------------DTYTIESLMH------ 223 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 + ++ G Y G +S + F +GK Y + Sbjct: 224 ---------------------DGKALQAGTSHYLGQNFSKAFAIQFSDRNGKLDYPHYTT 262 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 + + R++ A+I D G+ P +AP + +I + H + + E++ RL+KV Sbjct: 263 WAV-TTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAEELKERLAKV- 320 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V DD + G +++ ++ G PL++ +G K + ++ + R + +SL+E+ Sbjct: 321 VRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEI 378 >gi|262275836|ref|ZP_06053645.1| threonyl-tRNA synthetase [Grimontia hollisae CIP 101886] gi|262219644|gb|EEY70960.1| threonyl-tRNA synthetase [Grimontia hollisae CIP 101886] Length = 642 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 148/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G + A +R + E+ P + LW SG +D Y Sbjct: 256 MQQEAPGMVFWHHNGWVVFRELEAFVRSKLAEYNYQEVKGPLIMDRVLWERSGHWDKYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + P + IF +KSYR+LP + R+E G+M Sbjct: 316 YMFTTQSEN-REYALKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F TPE + + G + I ++ + P +G D Sbjct: 375 RVRGFTQDDAHIF-CTPEQVQQEVTSCIKMVYDTYKTFGFEDIVVKLSTRPEMRVGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + S N F+ I+E A Y + L Sbjct: 432 ----AMWDRAEKALAEA-------LESMNIQFE-------ILEGEGAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + ++LP + AT+ G D + H M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDFALPERLGATYVGEDNERHTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI + + +++ +L K G D Sbjct: 521 FIGILIEEYAGH---FPSWLAPQQAVVMNITDNQA---EYVQEVAKKLQKAGFRASADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 575 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 611 >gi|254995424|ref|ZP_05277614.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Mississippi] Length = 636 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 9/199 (4%) Query: 14 NPRDAEIASHKLMLR-TGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 N ++AE H+ + + G H ++ G W G + IR + + G E+ Sbjct: 236 NMQEAEKRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRIIEEYIRCKLKKHGYHEVK 295 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + LW +SG ++ + + M + D + K + P + IF+S I+SY+ LP Sbjct: 296 TPIMLDRKLWEKSGHWEKFKENMFVVED-DKKELAIKPMNCPCHVQIFKSKIRSYKELPI 354 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + + R+E +G+MR R F DA+ F T E + + + + ++ G Sbjct: 355 RMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIF-CTHEQVRDEVLRFYELLMEVYKDFG 413 Query: 190 LKSIPMRAESGP---IGGD 205 S+ ++ P IG D Sbjct: 414 FDSVTVKLSDRPENRIGSD 432 >gi|328957059|ref|YP_004374445.1| threonine--tRNA ligase [Carnobacterium sp. 17-4] gi|328673383|gb|AEB29429.1| threonine--tRNA ligase [Carnobacterium sp. 17-4] Length = 645 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 89/420 (21%), Positives = 167/420 (39%), Gaps = 52/420 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I + + G + P + +L+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDREISLGYQHVYTPIMADVNLYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ + SYR LP ++ R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDVHSYRELPIRIAELGQMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + D ++F + P+ + + + L ++ + R + P + ++ + Sbjct: 382 TLNDGHTF-VRPDQIEEEFKRTLELMLAVYGDFNITDYRFRLSYRDPNNTEKYYDDDGMW 440 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + +T + + D M+ D+ + E A Y DV + Sbjct: 441 EKAQTMLKAAMDDMEL-------DYFE-------AEGEAAFYGPKLDVLVK--------- 477 Query: 275 KRVSARGIE-----VGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAM-RVVA 326 +A GIE + F ++ L T+ G DG++++ V + + M R VA Sbjct: 478 ---TAIGIEETLSTIQLDFLLPERFDL----TYVGEDGENNHRPVVIHRGIVSTMERFVA 530 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +IE KG +P +AP + ++I N+ H D +I +L +G V D+ Sbjct: 531 YLIEEY---KG-AFPTWLAPVQATIIPVNLDMH----TDYAYEIKKQLESIGMRVDVDER 582 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E++G + + P Q++VG V D+ V ++ E + L + I S N Sbjct: 583 NEKMGYKIRASQTQKIPYQLVVGDSEVQDNTVAVRKYGEKATETIGLNDYIEKVSSEIKN 642 >gi|323702723|ref|ZP_08114384.1| threonyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] gi|323532386|gb|EGB22264.1| threonyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] Length = 636 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 90/420 (21%), Positives = 155/420 (36%), Gaps = 47/420 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I G + P G + + R E + G E+ P + + LW +SG + Y K Sbjct: 255 IQDEGPGFPFFHPKGMVLRNELENFWRREHKKRGYQEIRTPIILNRSLWEQSGHWAHY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D P + ++++ + SYR+LP ++ L R EL G+M Sbjct: 314 ENMYFTKIDDADYAVKPMNCPGSILVYKTRMHSYRDLPLRLAELGLVHRHELSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F + P K + + + GL S + + P S E Sbjct: 374 RVRCFTQDDAHIF-MLPSQIKDEIIGVIDLFEYFYKTFGL-SYHVELSTRPEKSMGSDEI 431 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 LA +K+ M + + + F Y D H L DS Sbjct: 432 WELATRSLQDALEAKN-MPYKVNEGDGAF----------------YGPKIDFH---LTDS 471 Query: 271 LPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVA 326 L R + G I F K+ L T+ G DG+ H V + G++ Sbjct: 472 L-------GRTWQCGTIQLDFQMPEKFDL----TYVGEDGQKHRPVMIHRVVFGSIERFI 520 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ G +W +AP ++ ++ I H R+ +K+ A +V D Sbjct: 521 GILTEHFAGAFPVW---LAPVQVKVLPITDKHHDYARELVQKLDAMDIRVELDA----RN 573 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 E+I + A P +++G + + + V ++ R G + ++E I N Sbjct: 574 EKINYKIREAQTQKIPYMLVIGDREMENGTVAVRQRGKGDIGAVKMDEFIAKIEDEIKNK 633 >gi|172087694|ref|YP_204597.2| threonyl-tRNA synthetase [Vibrio fischeri ES114] gi|197335357|ref|YP_002156016.1| threonyl-tRNA synthetase [Vibrio fischeri MJ11] gi|171902287|gb|AAW85709.2| threonyl-tRNA synthetase [Vibrio fischeri ES114] gi|197316847|gb|ACH66294.1| threonyl-tRNA synthetase [Vibrio fischeri MJ11] Length = 642 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 152/397 (38%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G + +RE+ + E+ P + LW SG +D Y + Sbjct: 256 MQQEAPGMVFWHHNGWTIFRELEVFVREKLTQYDYQEVKGPLMMDRVLWERSGHWDKYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + + + + Y + G +I ++ + P +G D Sbjct: 375 RVRGFTQDDAHVFCTEAQVQQEVKSCIEMVY-DTYQTFGFDNIVVKLSTRPEQRVGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E+ + + + M+ P I E A Y + L Sbjct: 432 ----EMWDRAESDLKLALESMEIPY--------------EIQEGEGAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + ++LP + AT+ G D + H M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDFALPERLGATYVGEDNERHTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++ I D ++I +L K G V D Sbjct: 521 FIGILIEDYAG---FFPTWLAPEQAIVMGITDKQA---DYVQEIAKKLQKNGFRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 575 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 611 >gi|297588366|ref|ZP_06947009.1| threonine--tRNA ligase [Finegoldia magna ATCC 53516] gi|297573739|gb|EFH92460.1| threonine--tRNA ligase [Finegoldia magna ATCC 53516] Length = 634 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 89/425 (20%), Positives = 160/425 (37%), Gaps = 55/425 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G + P G L+ + ++E+ G ++ P + + DLW +SG +D Y + Sbjct: 255 IQEEGPGFPFFHPNGMVVLNELEKFLKEQLLDRGYGQIKTPLILNEDLWHQSGHWDHYKE 314 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D +D A+ P + +++ + SYR LP ++ R EL G+ Sbjct: 315 NMYFTQIDGDDYAI--KPMNCPGSILVYKDELHSYRELPIKVAELGQVHRHELSGALHGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKM--FVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 R R F+ DA+ F L PE + K+ F Y I+ + G K Sbjct: 373 FRVRTFVQDDAHVFCL-PEQIEEEVTKIIDFCDY--IYSKFGFK---------------- 413 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + V T S + D I S + + I E A Y D H E Sbjct: 414 --YEVELSTRPEDSMGSDEDWDLAINSLKSALEHKGLEYKINEGDGAFYGPKIDFHLEDA 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 +G + GT + +P T+ +DG M I G+ Sbjct: 472 ----------------IGRTWQCGTIQLDFQMPERFDMTYIASDGSKKRPAMIHRAILGS 515 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + GK +W ++P ++ ++ I D ++ ++ G V Sbjct: 516 EERFMGILIEHYAGKFPLW---LSPIQVEILPISDK---FNDYAYELQQKMKARGLRVKV 569 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 DD E+IG + + L +I+G + +++V ++ R G + +E I+ Sbjct: 570 DDRSEKIGLKIRESQLKKVNYSLIIGQNEIDNNEVSVRKRDLGDVGSKNTDEFIDELVDE 629 Query: 442 FSNNR 446 + N + Sbjct: 630 YQNRK 634 >gi|298694953|gb|ADI98175.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus ED133] gi|323440773|gb|EGA98482.1| threonyl-tRNA synthetase [Staphylococcus aureus O11] gi|323442928|gb|EGB00551.1| threonyl-tRNA synthetase [Staphylococcus aureus O46] Length = 645 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/404 (20%), Positives = 168/404 (41%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ ++M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 QLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K + ++ + ++ G + R LS+ D Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFR---------LSYR-----D 426 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + + + D D +EN + L E+ A + ++ ++ + + Sbjct: 427 PEDKEKYFDDD--DMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEE 484 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSH 333 +S ++ F ++ L T+ G DG+ H + G+ + R VA + E + Sbjct: 485 TLSTAQLD----FLLPERFDL----TYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEET- 535 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 KG +P +AP ++ +I N+ H D ++ L G V D+ E++G + Sbjct: 536 --KG-AFPTWLAPKQVQIIPVNVDLH----YDYARQLQDELKSQGVRVSIDERNEKMGYK 588 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFI 632 >gi|89892986|ref|YP_516473.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense Y51] gi|89332434|dbj|BAE82029.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 641 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 85/396 (21%), Positives = 152/396 (38%), Gaps = 51/396 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H G + P G + + R+E + G E+ P + S +LW SG +D Y K Sbjct: 258 LHDEGPGFPFFHPKGMVLRNQLEDFWRQEHRKRGYHEIKTPIILSRNLWENSGHWDHY-K 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 + + +D+ P + +++ ++SYR+LP ++ L R EL G++ Sbjct: 317 DNMYTTKIDDEDFAVKPMNCPGGMIMYKQKLRSYRDLPLRMGELGLVHRHELSGALNGLL 376 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLS 207 R R F DA+ F + P K + + R + G + + R E+ +G D + Sbjct: 377 RVRNFTQDDAHIF-MLPSQIKAEISGVIDLVDRFYKVFGFEYHVELSTRPENS-MGADET 434 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E T Q +++ I + F Y D H L Sbjct: 435 WEMA----TNALQEALEAKGVNYKINPGDGAF----------------YGPKIDFH---L 471 Query: 268 FDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMR 323 D L R + G I F K+ L T+ G DG+ H V + G++ Sbjct: 472 RDCL-------GRTWQCGTIQLDFQMPEKFDL----TYIGEDGQKHRPVMIHRVVYGSIE 520 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 A++ + G +P +AP ++ ++ I + D + I RL+ + D+ Sbjct: 521 RFIALLTEHYAGA---FPTWLAPVQVRVLPISERHE---DYAQDIVRRLNDLDIRAEVDE 574 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E+I + A P ++VG + V ++ Sbjct: 575 RREKISYKIREAQTHKIPFALVVGDQEAETDTVAVR 610 >gi|218245600|ref|YP_002370971.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8801] gi|257058646|ref|YP_003136534.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8802] gi|218166078|gb|ACK64815.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8801] gi|256588812|gb|ACU99698.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8802] Length = 607 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 85/424 (20%), Positives = 168/424 (39%), Gaps = 56/424 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + ++ EQ + G + + P + DL+ SG + +Y ++M + Sbjct: 221 GLPLWTPKGTIIRSTLEDFLKREQLKRGYLSVVTPHIGRVDLFKISGHWQNYKEDMFPMM 280 Query: 98 DRNDK------AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 N + P + I++S ++SYR LP + +R E G+ Sbjct: 281 AENAEEAAQEIGFALKPMNCPFHIQIYKSELRSYRELPIRLAEFGTVYRYEQSGELGGLT 340 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-----AESGP-IGG 204 R R F + D++ F +TP+ + + L +F L LK+ R ES IG Sbjct: 341 RVRGFTVDDSHLF-VTPDQLDAEFLNVVDLILAVFKSLQLKNFKARLSFRDPESDKYIGS 399 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 D + E A + + + F P E A Y D Sbjct: 400 DEAWE---KAQNAIRRAVQTLEMDYFEAPGE-----------------AAFYGPKLDF-- 437 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGA 321 +F + E R ++G + Y+LP + DG + V + G+ Sbjct: 438 --IFHDVLE------REWQLGTV---QVDYNLPQRFELEYVAEDGTRQRPVMIHRAPFGS 486 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + + ++ + G +W ++P + L+ + + D +++ +++ ++G Sbjct: 487 LERLIGILIEEYAGDFPLW---LSPIQARLLPV---SDLQLDYAKEVASKMQQLGIRAEA 540 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 D GE++G A+ P+ ++G+K V + + I+ R +G ++ +EVI + Sbjct: 541 DTSGERLGKMVRNAEKQKIPVMGVIGAKEVESNSLSIRTRASGELGTIATDEVIKKLAEA 600 Query: 442 FSNN 445 +N+ Sbjct: 601 ITNH 604 >gi|56417255|ref|YP_154329.1| threonyl-tRNA synthetase [Anaplasma marginale str. St. Maries] gi|73919765|sp|Q5P9F6|SYT_ANAMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56388487|gb|AAV87074.1| threonyl-tRNA synthetase [Anaplasma marginale str. St. Maries] Length = 636 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 9/199 (4%) Query: 14 NPRDAEIASHKLMLR-TGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 N ++AE H+ + + G H ++ G W G + IR + + G E+ Sbjct: 236 NMQEAEKRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRIIEEYIRCKLKKHGYHEVK 295 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + LW +SG ++ + + M + D + K + P + IF+S I+SY+ LP Sbjct: 296 TPIMLDRKLWEKSGHWEKFKENMFVVED-DKKELAIKPMNCPCHVQIFKSKIRSYKELPI 354 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + + R+E +G+MR R F DA+ F T E + + + + ++ G Sbjct: 355 RMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIF-CTHEQVRDEVLRFYELLMEVYKDFG 413 Query: 190 LKSIPMRAESGP---IGGD 205 S+ ++ P IG D Sbjct: 414 FDSVTVKLSDRPENRIGSD 432 >gi|329569946|gb|EGG51701.1| conserved domain protein [Enterococcus faecalis TX1467] Length = 49 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 24/48 (50%), Positives = 35/48 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQK 48 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANR 48 >gi|227889526|ref|ZP_04007331.1| threonyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] gi|227850004|gb|EEJ60090.1| threonyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] Length = 643 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 88/405 (21%), Positives = 162/405 (40%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I +++ G + P L + D + SG + Y +M Sbjct: 259 GLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNVDAYKTSGHWAHYRDDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 379 TLNDGHTF-VALDQIREEFAKVLKLIMDVYKDFDITDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M S D + L+ + E A Y D+ + +L + Sbjct: 424 PKNTDKYYANDEMWERSQSMLKAAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFGL----TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N +AH +K+ L+K G D E++G + Sbjct: 533 KGAFPTW---LAPVQAEIIPVNEEAHGAY----ADKVREELAKRGFRAEVDHRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G + ++ + V ++ T + SL+E IN Sbjct: 586 IRESQTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSLDEFIN 630 >gi|315230490|ref|YP_004070926.1| prolyl-tRNA synthetase [Thermococcus barophilus MP] gi|315183518|gb|ADT83703.1| prolyl-tRNA synthetase [Thermococcus barophilus MP] Length = 480 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 3/147 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + + ++ + ++ DG YV +YG+ R++AAVI D +G+ Sbjct: 221 GRTLQIGTMHNYKQNFAKAYNIMYEKEDGTHEYVHQTTYGMSE-RLLAAVIAVHGDDRGM 279 Query: 339 IWPDSVAPFKISLINIKAHDQV--CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P ++AP ++ ++ I D +I L G V D+ + G +F + Sbjct: 280 VLPPTIAPIQVVIVPIPKKDSPYDVFAYAREIAEELKTAGIRVHVDERDIRPGRKFYDWE 339 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLT 423 L G PL++ VG + V K + R T Sbjct: 340 LKGVPLRIEVGPRDVEGQKAVLARRDT 366 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 5/124 (4%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + N+ I EE RTG E+ P L + E+ + E+ Sbjct: 33 KGMNIWLPYGLRIMRNIEKFIHEEMERTGHQEVLFPALIPETEFQKEAEHIAGFEGEVFW 92 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D D +I PT E M +F I+S+ +LPF YQI +R E + ++R Sbjct: 93 VTHAGHDPLDVRLILRPTSETAMYSMFALWIRSHADLPFKIYQIVNVYRYETKHTRPLIR 152 Query: 152 SREF 155 RE Sbjct: 153 VREI 156 >gi|56965736|ref|YP_177470.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16] gi|56911982|dbj|BAD66509.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16] Length = 637 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 79/409 (19%), Positives = 157/409 (38%), Gaps = 42/409 (10%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE +H+ + L M + + G+ +L GQ + + + +R Q + E+ P Sbjct: 239 EAEKRNHRKLGKELELFMFSEEAPGMPFYLANGQIIRNELESFLRNLQAKYDYKEVRTPI 298 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + + LW +SG +D Y KE + +++ P + IF++ + SYR+LP Sbjct: 299 MMNQRLWEQSGHWDHY-KENMYFTQVDEQQFALKPMNCPGHMLIFKNGLHSYRDLPIRMA 357 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK- 191 + R E G++R R F DA+ F +TP+ + ++ G K Sbjct: 358 EFGQVHRHEFSGALNGLLRVRTFCQDDAHIF-VTPQQIEEEITLALKIIDHVYQVFGFKY 416 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 I + G S A+T V ++ + E Sbjct: 417 EIELSTRPDDFMG--SEHLWEQAETALENVLQKLNYA-----------------YKVNEG 457 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D+H + D++ + + + ++ F K+ L + K Sbjct: 458 DGAFYGPKIDIH---IKDAIQRSHQCATVQLD----FQLPEKFDL---TYIDKQNEKKRP 507 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 V + G++ ++ G +W +AP ++ ++ + V D C I + Sbjct: 508 VVIHRAVFGSIDRFLGILIEHFAGAFPVW---LAPVQVQIVPV---SHVHLDYCLTIQSE 561 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 L +VG V D+ E++G + A + P +++G + + V ++ Sbjct: 562 LKQVGVRVNIDESDEKLGYKIRKAQMQKIPCTIVLGDNELKEETVTVRQ 610 >gi|240850680|ref|YP_002972080.1| threonyl-tRNA synthetase [Bartonella grahamii as4aup] gi|240267803|gb|ACS51391.1| threonyl-tRNA synthetase [Bartonella grahamii as4aup] Length = 658 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 98/450 (21%), Positives = 175/450 (38%), Gaps = 51/450 (11%) Query: 5 KYFLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H+ + R + H + G+ W G K N+ +R Sbjct: 233 KAYLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGMIFWHKKGWKMFQNLINYMRRRL 288 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL---ADRNDKAMIYG--PTHEEVMTD 116 + E++ P + LW SG + Y + M ++ A+ +D +Y P + Sbjct: 289 DDHQYAEVNAPQVLDRSLWEISGHWGWYKENMFKVIPVAENSDHGNVYALKPMNCPGHVQ 348 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKH--S 173 IF+ +KSYR+LP + L R E G+MR R F DA+ F + + S Sbjct: 349 IFKHGLKSYRDLPIRLAEFGLVHRYEPSGSLHGLMRVRGFTQDDAHIFCTDEQLADECLS 408 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDF 230 N + +S + G K I ++ + P +G D L D E+ M+ Sbjct: 409 INDLILS---TYADFGFKEISLKLSTRPEKRVGSD------ALWDHAES-------IMES 452 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + T F I SI+ A Y + L D++ + I+ F Sbjct: 453 VLKTIETKFAGQIK-TSILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQIDFNLPERF 508 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 G Y K V + G+M ++ + G +W +AP ++ Sbjct: 509 GAFY-------IDKDSEKRQPVMIHRAIFGSMERFLGILIENFAGHMPLW---LAPEQVV 558 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + I + + +KI A+L +G D E+I + L P+ ++ G + Sbjct: 559 VATITSE---ANEYAQKITAKLRAIGLSATIDLRNEKINYKIREHSLQKVPVILVCGKRE 615 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASH 440 + V ++ + + +S+E+VI S+ Sbjct: 616 AETNSVNMRRLGSTNKTLLSVEDVIKQLSN 645 >gi|223997660|ref|XP_002288503.1| threonyl-trna synthetase [Thalassiosira pseudonana CCMP1335] gi|220975611|gb|EED93939.1| threonyl-trna synthetase [Thalassiosira pseudonana CCMP1335] Length = 592 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 90/414 (21%), Positives = 156/414 (37%), Gaps = 44/414 (10%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + KL L + + G+ W P G + +E + P + Sbjct: 178 RDHRVLGKKLDLFS-IQEDAGGGLVFWHPKGSTVRRKIEDFWKEAHIAQDYDIVYTPHIA 236 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + DLW SG YD Y + M D ++ P + +F+ I+SYR+LPF + ++ Sbjct: 237 NLDLWKTSGHYDFYREGMFDQMDVENEVYQIKPMNCPFHCLMFKDSIRSYRDLPFRWGEL 296 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 +R E G+MR R F DA+ F L PE + + I R G Sbjct: 297 GTVYRYERSGTLHGLMRVRGFTQDDAHIFCL-PEQLQSEIVDVLKLTKDILSRFGFNKYE 355 Query: 195 MRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + + P +G D + A G D++ E Sbjct: 356 LMVSTRPEKSVGSDQIWDDATKALVGA--------------------LDELGWEYGTDEG 395 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D+ K+ D++ + S V F ++ L + A+GK Sbjct: 396 GGAFYGPKIDL---KIKDAIGRTWQCST----VQCDFNLPERFDL----EYVSAEGKKER 444 Query: 312 VQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 M I G++ ++ + G W +AP ++ L+ + D V D C+++ Sbjct: 445 PIMVHRAIFGSIERFFGILVENTAGDLPFW---LAPTQLKLLPVT--DAVV-DYCKEVAK 498 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + +K+G V D E++ Q A+ P+ +VG K + + + ++ R G Sbjct: 499 KANKMGLRVEVDRGAERLAKQIRNAEQSRIPVMAVVGMKEMEEGTLALRSRKLG 552 >gi|291287861|ref|YP_003504677.1| threonyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290885021|gb|ADD68721.1| threonyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 637 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 97/421 (23%), Positives = 169/421 (40%), Gaps = 47/421 (11%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T + G +LP G + + ++E + G Sbjct: 228 YLNMLEEAEKRDHRKIGKQLKLFT-FSEEAGAGFPIYLPNGGALRNVLETYEKQEHIKRG 286 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P++ DLW +SG YD+Y +E + +D P + +F S I+SY Sbjct: 287 YDIVYGPSILKQDLWKKSGHYDNY-RENMYFTKIDDVDYGVKPMNCLAHMMVFNSDIRSY 345 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++++ R E G++R R F DA+ F TPE Sbjct: 346 RDLPQRYFELGTVHRHEKSGVLHGLLRVRAFTQDDAHLF-CTPE---------------- 388 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 +L + I + + G E+ + T + S D + + N F+ + + Sbjct: 389 --QLNDEIIGIIDFVDEVMGKFGFEYEIEVSTKPEKYIGSDDNWE---KATNALFEALKT 443 Query: 245 LN---SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ KL D++ + + + F K+ L Sbjct: 444 KGLEYEINEGDGAFYGPKIDI---KLKDAIGRYWQCAT----IQADFNLPEKFDL----N 492 Query: 302 FKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG+ H V + +G++ V+ G +W VAP ++ +INI Q+ Sbjct: 493 YIGEDGQKHRPVMLHRVILGSVDRFIGVLTEHFAGAFPVW---VAPKQVRVINI-TDGQL 548 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D C+ + +L G V D E++G + A + P +I+G V V ++ Sbjct: 549 --DYCKALVQKLKAEGFRVDSDLRNEKVGFKIREAQMEKIPHMLIIGQNEVDKELVSVRL 606 Query: 421 R 421 R Sbjct: 607 R 607 >gi|225175968|ref|ZP_03729960.1| prolyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] gi|225168556|gb|EEG77358.1| prolyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] Length = 483 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 12/186 (6%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA-----RGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 P NEK F E + A + ++ G GT ++ T+ +DG+ Sbjct: 198 PVVKGQKTENEK-FAGARETYSIEALMSDGKALQAGTSHNLGTHFAKVFDITYLDSDGEL 256 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACE 366 +V S+G+ + R+V A+I D +G++ P VAP ++ L+ I K ++V A Sbjct: 257 KHVWQTSWGV-STRLVGAIIMVHGDDRGLVLPPKVAPTQVILVPIAPKKVREEVLPKAA- 314 Query: 367 KIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 IY + + G + DD E G +F ++ G PL++ VG + + + + R G Sbjct: 315 AIYEEIKEAGIRIEMDDREEYSPGWKFNEWEMKGVPLRIEVGPRDLEAGQAVLARRDNGE 374 Query: 426 REDMSL 431 +E +++ Sbjct: 375 KETVAI 380 >gi|254462954|ref|ZP_05076370.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083] gi|206679543|gb|EDZ44030.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083] Length = 643 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 7/193 (3%) Query: 24 KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 KL G+ H + + G W P G + + A +R Q+ G +E++ P + LW Sbjct: 250 KLGREMGLFHFEEVAPGSVIWHPNGWRVFQTLIAYMRRRQDVAGYVEVNTPDIMDRALWE 309 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 SG + +Y + M ++D+ P + ++ ++SYR+LP + R Sbjct: 310 TSGHWFNYKENMFLAQTQDDRDYALKPMNCPGHMMVYNHSLRSYRDLPVKIAEFGKVHRY 369 Query: 142 ELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 E G++R R F DA+ + +PE K+ L I+ G + + ++ + Sbjct: 370 EPSGALHGLLRVRSFTQDDAHIY-CSPEQLTDECLKVNDLILSIYKDFGFEDVHVKLSTR 428 Query: 201 P---IGGDLSHEF 210 P IG D S + Sbjct: 429 PENRIGSDESWDL 441 >gi|331232891|ref|XP_003329107.1| threonyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309308097|gb|EFP84688.1| threonyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 765 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 2/136 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G WLP G + + + + E + G E+ P + +A LW SG +++Y Sbjct: 365 FHELSPGSCFWLPHGTRIYNTLVEFFKSEYRKRGYDEVISPNMYNAKLWQTSGHWENYAD 424 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M +L D + P + IF S +SYR LP + R+E G+ Sbjct: 425 SMFKL-DIEKETFGLKPMNCPGHCLIFGSRDRSYRELPIRMADFGVLHRNEASGALSGLT 483 Query: 151 RSREFLMKDAYSFDLT 166 R R F DA+ F T Sbjct: 484 RVRRFCQDDAHHFCTT 499 >gi|301106649|ref|XP_002902407.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4] gi|262098281|gb|EEY56333.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4] Length = 764 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 75/337 (22%), Positives = 128/337 (37%), Gaps = 74/337 (21%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E +M F++ I+S+R+LP Q R E + +R+REFL ++ ++ T Sbjct: 367 PTSETIMYPAFKNWIRSHRDLPMKLNQWNNVVRWEFKNPTPFLRTREFLWQEGHTAHATK 426 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E + + Y + L ++PM + E + F D+ Sbjct: 427 EEADEEVRAVLDFYAACYEE--LLAVPM----------------IKGVKTEKEKFAGADY 468 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 T + I Q AATS + G G + Sbjct: 469 --------TTTIEGFIPATGRGIQ-----AATSHM-----------------LGQNFGKM 498 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 F +Y DGK S+G R + +I D KG++ P VAP Sbjct: 499 FGITAEYE----------DGKKLIPWQNSWGF-TTRSLGVMIMVHGDDKGLVLPPRVAPT 547 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI----------GSQFAVADL 397 ++ ++ I +Q D E+I+A+ ++ + D G +I G ++ +L Sbjct: 548 QVIVVPIPFKNQ---DEVEEIFAKADEIVAKLA--DAGVRIEADKRCVYTPGWKYNHWEL 602 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL+ VG K ++ +V + R G +ED+ E+ Sbjct: 603 KGVPLRFEVGPKDIAKKQVRVVRRDNGAKEDIPEAEL 639 >gi|164687668|ref|ZP_02211696.1| hypothetical protein CLOBAR_01310 [Clostridium bartlettii DSM 16795] gi|164603442|gb|EDQ96907.1| hypothetical protein CLOBAR_01310 [Clostridium bartlettii DSM 16795] Length = 639 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 91/412 (22%), Positives = 161/412 (39%), Gaps = 51/412 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G ++P G + + + RE +E+ P + + LW SG + Y K Sbjct: 255 IPEEGPGFPLFMPKGMQLKNALLEFWREVHKEDNYVEIETPIILNRHLWETSGHWYHY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + +D+ P + ++S SYR+ P ++ R EL G+M Sbjct: 314 ENMYTVKIDDQDFAIKPMNCPGGMLYYKSKPHSYRDFPMRVAELGRVHRHELSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLS 207 R R F DA+ F + PE K + ++ G + + R E +G D Sbjct: 374 RVRAFTQDDAHIF-MLPEQIKDEIKDVVRLIDSVYKVFGFQYGIELSTRPEDS-MGTDEE 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E +A+ G + +++ I E A Y D H L Sbjct: 432 WE---IAENGLREAL-----------------EELGLAYEINEGDGAFYGPKIDFH---L 468 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRV 324 D L R + G I LP AT+ G DG+ H V + +G++ Sbjct: 469 RDCL-------GRTWQCGTI---QLDMQLPQRFDATYIGQDGEKHRPVMIHRVLLGSIER 518 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + GK +W +AP ++ ++ I ++ + + ++A+ G V DD Sbjct: 519 FIGILIEHYAGKFPVW---IAPTQVKILPISDKYNDYAKAVKDALFAK----GLRVEIDD 571 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++G + A L P ++VG K V + V ++ R G +S++E + Sbjct: 572 RAEKMGFKIREAQLEKVPYMLVVGEKEVEANAVSVRSRDKGEMGSLSVDEFV 623 >gi|70725135|ref|YP_252049.1| threonyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|68445859|dbj|BAE03443.1| threonyl-tRNA synthetase 2 (Threonine--tRNA ligase) [Staphylococcus haemolyticus JCSC1435] Length = 638 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 11/168 (6%) Query: 3 RSKYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 RSK L E R+AE +H+ + L+ M + + G+ +L GQ + + +RE Sbjct: 224 RSKDQLDDYFEFLREAEERNHRRLGKQLKLFMFSEEAPGMPFYLSNGQFIRNQMENFLRE 283 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAM--IYGPTHEEVMTD 116 Q + E+ P + + LW ESG +D Y + M D ND A+ + P H Sbjct: 284 VQLKHDYDEVRTPLMMNKRLWEESGHWDHYHENMYFTKVDENDYALKPMNCPGH----ML 339 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 IF++ ++SY++LP + R E G++R R F DA+ F Sbjct: 340 IFKNELRSYKDLPLRIAEFGQVHRHEFSGALNGLLRVRTFCQDDAHIF 387 >gi|83951679|ref|ZP_00960411.1| threonyl-tRNA synthetase [Roseovarius nubinhibens ISM] gi|83836685|gb|EAP75982.1| threonyl-tRNA synthetase [Roseovarius nubinhibens ISM] Length = 648 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 88/401 (21%), Positives = 150/401 (37%), Gaps = 54/401 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R Q G +E++ P + LW +SG ++ Y + Sbjct: 260 MQEEAPGQVFWHPNGWTIYTELQDYMRRAQRAGGYVEVNTPQVVDRKLWEKSGHWEKYQE 319 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF +KSYR+LP + R E Sbjct: 320 HMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGG 204 GVMR R F D + F E S K F+ +L R++ LG ++ ++ P Sbjct: 380 LHGVMRVRGFTQDDGHIF--CREDQIESETKRFIDFLSRVYRDLGFENFSVKFSDRPEKR 437 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 S E + D ET + + + + N F +LN + P Sbjct: 438 SGSDE---VWDKAETALKSATE-------AANCSF----TLNPGEGAFYGP--------- 474 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYG 318 KL L + +G + GT + LP + AT+ G DG H V + Sbjct: 475 -KLEFVLTDA---------IGRDWQCGTLQVDFVLPERLDATYIGEDGAKHRPVMLHRAT 524 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G+ ++ H GK W +AP ++ + +I + D ++ A L G Sbjct: 525 LGSFERFIGILIEEHAGKLPFW---LAPRQVVVASIVSE---ADDYVHEVVAGLRAQGVR 578 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + + P+ + G + V + V ++ Sbjct: 579 AEADIRNEKINYKVREHSVGKVPVILACGLREVEEKTVSVR 619 >gi|302387069|ref|YP_003822891.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1] gi|302197697|gb|ADL05268.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1] Length = 629 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 101/441 (22%), Positives = 171/441 (38%), Gaps = 55/441 (12%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L T M G +LP G + + R+ R Sbjct: 229 EYLTRMEEAKKRDHRKLGKELGLFTLM--DEGPGFPFFLPKGMILKNLLIDYWRKIHERE 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIK 123 +E+S P + S LW SG +D Y M D D A+ P + +++S Sbjct: 287 RYVEISTPMMLSRKLWETSGHWDHYKDNMYTTKIDEEDFAI--KPMNCPGGLLVYKSVPH 344 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ L R E G+MR R F DA+ + +T E + Sbjct: 345 SYRELPIRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIY-MTQEQITDEIKGVVRLID 403 Query: 183 RIFHRLGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ + G K + + E+ IG + E +A G + Sbjct: 404 EVYSKFGFKYHVELSTKPENS-IGSEADWE---IATCGLRKAL----------------- 442 Query: 240 DDIISLNSIVEQWT-APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP- 297 D + +N +V + A Y D H E DS+ R + G I + LP Sbjct: 443 -DELQMNYVVNEGDGAFYGPKIDFHLE---DSI-------GRTWQCGTI---QLDFQLPQ 488 Query: 298 -MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 A + GADG+ H + + G++ ++ GK +W +AP +I ++ I Sbjct: 489 RFEAEYIGADGEKHRPIMIHRVVFGSIERFIGILIEHFAGKFPVW---LAPVQIKILPI- 544 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + +++ +L K D+ E+IG + A L P +I+G K Sbjct: 545 --SEKFSTYSKEVLMKLKKADIRCEMDERDEKIGYKIREAQLEKVPYMLILGEKEAETGM 602 Query: 416 VEIKHRLTGIREDMSLEEVIN 436 + ++ R G MS+E++I+ Sbjct: 603 LSVRSREQGDIGIMSIEKIID 623 >gi|295096109|emb|CBK85199.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 622 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 86/411 (20%), Positives = 153/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N ++ G + I ++ + P IG D + Sbjct: 355 RVRGFTQDDAHIF-CTEDQVREEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 413 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 D E + + + P + + A Y + L Sbjct: 414 ------WDRAEADLAVALEENGIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G++ Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPQRLSASYVGEDNERQVPVMIHRAILGSLER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI D +++ +L G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQA---DYVKELTQKLQNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R + + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVI 605 >gi|329764876|ref|ZP_08256467.1| prolyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138662|gb|EGG42907.1| prolyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 480 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 7/157 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++G + G +S+P F D + + S+G+ + R++ A+I D KG+ Sbjct: 224 GKALQMGTSHFLGQNFSIPFEVKFADKDNVEQFAWQTSWGV-SWRLIGAMIMVHGDDKGL 282 Query: 339 IWPDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAV 394 + P VAP ++ ++ I D + +I +L V DD E G +F Sbjct: 283 VLPPKVAPIQVVIVPIYKSDDARNIVFPKLNEIKEQLETKKIRVHVDDRNELTPGYKFND 342 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 +L G PL++ +G K + ++ + R RE +SL Sbjct: 343 WELKGVPLRIEIGPKDIEKQQIVLAKRYN--REKISL 377 >gi|312898595|ref|ZP_07757985.1| threonyl-tRNA synthetase [Megasphaera micronuciformis F0359] gi|310620514|gb|EFQ04084.1| threonyl-tRNA synthetase [Megasphaera micronuciformis F0359] Length = 635 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 86/412 (20%), Positives = 153/412 (37%), Gaps = 46/412 (11%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ G + P G + E +R ++S P + + LW +SG +D Y +E Sbjct: 256 HEEGPGFPFFHPKGMLLRQTLLKFWNELHDRYEYDQISTPIILNRQLWEQSGHWDHY-RE 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + +D+ P + +++S++ SYR+ P ++ L R EL G+ R Sbjct: 315 NMYFTTIDDEPYAIKPMNCPGGILVYKSNVHSYRDFPMRTAELGLVHRHELHGALHGLFR 374 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F + P K + + + GL P +LS Sbjct: 375 VRSFTQDDAHIF-MLPSQMKKEITGVLDLFDEAYKMFGL----------PYHVELS---- 419 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 T S + D + ++ I E A Y D H + DS+ Sbjct: 420 ----TRPENSMGSDEIWDLATQTLKEAIEEKGVPYQINEGDGAFYGPKLDFH---VKDSI 472 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAV 328 R + G I +P T+ G DG+ H V + G++ + Sbjct: 473 -------GRTWQCGTI---QLDMLMPERFDMTYVGEDGQKHRPVMVHRACFGSIERFIGI 522 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G +W +AP ++ ++ I D ++ + K G V D+ E+I Sbjct: 523 LIEHYAGAFPVW---LAPTQVKILPISEKQM---DYAVELRKKFKKAGIRVELDESNEKI 576 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G + A + P ++G K V + V ++ R G D+ V + +H Sbjct: 577 GYKIRKAQMEKVPYMCVIGEKEVQEQTVSVRDRSQG---DLGSRNVDEFIAH 625 >gi|268319910|ref|YP_003293566.1| threonyl-tRNA synthetase 1 [Lactobacillus johnsonii FI9785] gi|262398285|emb|CAX67299.1| threonyl-tRNA synthetase 1 [Lactobacillus johnsonii FI9785] Length = 643 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 87/404 (21%), Positives = 163/404 (40%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I +++ G + P L + D + SG + Y +M Sbjct: 259 GLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNVDAYKTSGHWAHYRDDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 379 TLNDGHTF-VALDQIREEFAKVLKLIMDVYKDFDITDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M S D + L+ + E A Y D+ + +L + Sbjct: 424 PKNTDKYYANDEMWEKSQSMLKAAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFGL----TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N +AH + +K+ A L+K G D E++G + Sbjct: 533 KGAFPTW---LAPVQAEIIPVNEEAHGEY----ADKVRAELAKRGFRAEVDHRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + P +++G + ++ + V ++ T + SL++ I Sbjct: 586 IRESQTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSLDDFI 629 >gi|45190586|ref|NP_984840.1| AEL021Cp [Ashbya gossypii ATCC 10895] gi|44983528|gb|AAS52664.1| AEL021Cp [Ashbya gossypii ATCC 10895] Length = 670 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 71/338 (21%), Positives = 127/338 (37%), Gaps = 70/338 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E M F ++SYR+LP + Q R E + +R+REFL ++ ++ LT Sbjct: 273 PTSETAMYPFFAKWVQSYRDLPLKYNQWTSVVRWEFKHPQPFLRTREFLWQEGHTAHLTK 332 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E + ++ Y +++ + L ++P +V E + F DF Sbjct: 333 EEATDEVMQILDHYEQVY--VELLAVP----------------VVKGTKTENEKFAGADF 374 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 S+ + Q + RGI+ Sbjct: 375 T--------------TSVEGYIPQ--------------------------TGRGIQGATS 394 Query: 288 FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 + G +S + + G H + S+G+ + R + ++ + D KG++ P V Sbjct: 395 HHLGQNFSKMFNICVENPLGPQHPKVHAYQNSWGL-STRSIGVMVMTHSDNKGLVIPPRV 453 Query: 345 APFKISL----INIKAHDQV---CRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVAD 396 A ++ + I K + V D+ I RL K G V D G +FA + Sbjct: 454 AQHQVVILPVGITAKTKEDVRSKIHDSARAIENRLHKAGIRVLGDYADNYTPGWKFAQYE 513 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L G PL++ G K + ++V R G + + L ++ Sbjct: 514 LKGVPLRLEFGPKDMEKAQVTAVRRNDGAKISVPLADL 551 >gi|296282100|ref|ZP_06860098.1| threonyl-tRNA synthetase [Citromicrobium bathyomarinum JL354] Length = 669 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 94/433 (21%), Positives = 158/433 (36%), Gaps = 74/433 (17%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G K + + +R + + G E+ P + A W +SG + Y + Sbjct: 264 LQEEAHGSVFWHPQGYKIWRQLESYMRRKMDGAGYREIKTPQVMDARQWEQSGHWGKYRE 323 Query: 92 EMLRLAD-------------RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 M + D ++ M P + +F+ I SYR LP ++ Sbjct: 324 NMFVIPDEVPNTEDEGELVSKDADWMALKPMNCPAHVLVFKQGITSYRELPIRLGEMGCC 383 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 R+E G+MR R+F DA+ F K V +R F L Sbjct: 384 HRNEPHGALHGLMRVRQFTQDDAHIF---------CTEKQVVEEVRAFIEL--------- 425 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 + + D ++ + Q F S + D+D EQ Sbjct: 426 -ADAVYRDFGFKYAIKLALRPEQRFGS-----------DADWDK-------AEQELRDAV 466 Query: 258 ATSDVHNEKL-FDSLPENKRVSARGIE------VGHIFYFGTKYS---LP--MSATFKGA 305 A + + N++ ++ LP A +E +G + GT LP + A++ G Sbjct: 467 AEAGMMNDEYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLPERLDASYIGE 526 Query: 306 DGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H M I G+ ++ GK +W +AP + + I + D Sbjct: 527 DGEKHRPVMLHRAIFGSYERFIGILIEHFAGKLPVW---LAPTQAVVATIVSD---ADDY 580 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + A+L G D E+I + L P ++VG + + V + R G Sbjct: 581 ASEALAKLRAAGIRAESDLRNEKINYKVREHSLAKVPHLLVVGKREAEEGTVAV--RTLG 638 Query: 425 IRED--MSLEEVI 435 RE MSL+E I Sbjct: 639 EREQRVMSLDEAI 651 >gi|194246824|ref|YP_002004463.1| prolyl-tRNA synthetase [Candidatus Phytoplasma mali] gi|193807181|emb|CAP18622.1| Prolyl-tRNA synthetase [Candidatus Phytoplasma mali] Length = 473 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 80/166 (48%), Gaps = 2/166 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + GTK+S + F+ D K +V S+GI + R++ A++ D +G+ Sbjct: 223 GQSLQSGTSHFLGTKFSEAFNIKFQDLDNKIKFVYQTSWGI-STRLLGALVMVHGDDEGL 281 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 ++P +AP +I +I ++ D +I+ L K V D + G +F+ ++ Sbjct: 282 VFPPYIAPLQIIIIPLQPKDANVIKFSNEIFEVL-KNKYRVKLDVQNKNTGWKFSQYEMK 340 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G PL++ VG + ++ + R +++ ++++ F N Sbjct: 341 GIPLRIEVGKHGLEKDEITVFTRYNFLKQQFKKDDLLTKIPFLFKN 386 Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 16/168 (9%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLR 95 KG +LP G + + +E +T + P L + +L+ + ++ + E Sbjct: 36 KGFIIYLPDGYFLWEQIQKFFNKELQKTNHQNVYFPLLFTENLFKKEKKHIQGFQPETAF 95 Query: 96 LADRNDK----AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI--QLKFRDELRPRFGV 149 + DK +I PT E + + + I SYR+LP + Q +++ RP Sbjct: 96 VTFAGDKNLSEKLILRPTSEVLFSQHYEKTITSYRDLPKLYNQWCNVIRWEKSTRP---F 152 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG--LKSIPM 195 +R +EFL ++ + T + +S ++++ +LG L +IP Sbjct: 153 LRGKEFLWQEGH----TAHANAQEAMSETLSIIKLYQKLGKELLAIPF 196 >gi|42519522|ref|NP_965452.1| threonyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|73919800|sp|Q74IC0|SYT_LACJO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|41583811|gb|AAS09418.1| threonyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] Length = 643 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 87/404 (21%), Positives = 163/404 (40%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I +++ G + P L + D + SG + Y +M Sbjct: 259 GLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNVDAYKTSGHWAHYRDDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 379 TLNDGHTF-VALDQIREEFAKVLKLIMDVYKDFDITDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M S D + L+ + E A Y D+ + +L + Sbjct: 424 PKNTDKYYANDEMWETSQSMLKAAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFGL----TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N +AH + +K+ A L+K G D E++G + Sbjct: 533 KGAFPTW---LAPVQAEIIPVNEEAHGEY----ADKVRAELAKRGFRAEVDHRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + P +++G + ++ + V ++ T + SL++ I Sbjct: 586 IRESQTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSLDDFI 629 >gi|312864463|ref|ZP_07724694.1| threonine--tRNA ligase [Streptococcus downei F0415] gi|311099590|gb|EFQ57803.1| threonine--tRNA ligase [Streptococcus downei F0415] Length = 651 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 3/136 (2%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q +G+ WLP G + I + + +G + P + S DL+ SG +D Y Sbjct: 254 MISQEVGQGLPFWLPDGATIRRTIERYITDREVASGYQHVYTPPIASVDLYKTSGHWDHY 313 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D +A + P + ++++H+ SYR LP ++ + R E Sbjct: 314 REDMFPTMDMGDGEAFVLRPMNCPHHIQVYKNHVHSYRELPIRIAELGMMHRYEKSGALS 373 Query: 148 GVMRSREFLMKDAYSF 163 G+ R RE + D ++F Sbjct: 374 GLQRVREMTLNDGHTF 389 Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 8/138 (5%) Query: 301 TFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T+ GADG++H M GI + R A +IE+ KG +P +AP ++++I + + Sbjct: 502 TYIGADGEEHRPVMIHRGIVSTMERFTAYLIETY---KGA-FPTWLAPHQVTVIPVS--N 555 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D ++ L G V D+ E++ + + P Q+IVG K ++D V + Sbjct: 556 EAHADYAWEVAKELRNHGVRVDVDERNEKMQYKIRQSQTHKIPYQLIVGDKEMADKSVNV 615 Query: 419 KHRLTGIREDMSLEEVIN 436 + + SL E ++ Sbjct: 616 RRYGSKQTHTESLNEFVD 633 >gi|315607978|ref|ZP_07882971.1| threonine--tRNA ligase [Prevotella buccae ATCC 33574] gi|315250447|gb|EFU30443.1| threonine--tRNA ligase [Prevotella buccae ATCC 33574] Length = 650 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 89/416 (21%), Positives = 149/416 (35%), Gaps = 65/416 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R E+ P + L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTELRLRLQELLRSMLRPYNYQEVITPGIGGKSLYVTSGHYAHYGKDAFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + ++F +SY++LP + FR E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEVFARKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + P+ K + L++F+ G + + I L Sbjct: 383 TFTQDDAHIF-VRPDQVKAEFETNIDIILKVFNIFGFDNYEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D E W A + EK + E Sbjct: 428 RDPNDKEKYIGSD-----------------------EVWEESETAIKEACAEKGLKARVE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGI 319 + G + +G + GT Y+LP + D K V + Sbjct: 465 LGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPF 524 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ AV+ G +W PD VA IS + D + + VG Sbjct: 525 GSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYAKSVARYFDSVGV 576 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 D+ E+IG + +L P VIVG K ++ V ++ + G + M++EE Sbjct: 577 RAIIDERNEKIGRKIRDNELKRVPYMVIVGEKESAEGLVSMRKQGGGEQATMTMEE 632 >gi|269798232|ref|YP_003312132.1| threonyl-tRNA synthetase [Veillonella parvula DSM 2008] gi|269094861|gb|ACZ24852.1| threonyl-tRNA synthetase [Veillonella parvula DSM 2008] Length = 636 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 85/396 (21%), Positives = 157/396 (39%), Gaps = 49/396 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +I + G +LP G + + RE + E+ P + + LW SG + Y Sbjct: 256 VIKEEGPGFPFFLPKGMALRNELENFWREVHHEFEYEEIRTPIILNKQLWETSGHWFHYR 315 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M + D + A+ P + ++++ + SYR+ P + ++ L R EL G Sbjct: 316 ENMYTTIIDEEEYAI--KPMNCPGGILVYQNEMHSYRDFPLRYAELGLVHRHELSGALHG 373 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLS 207 + R R F DA+ F + P + K+ + RI+ + GLK + + + GD Sbjct: 374 LFRVRAFTQDDAHVF-MLPSQMQSELMKVIELFDRIYSQFGLKYHVELSTKPDNAMGD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + I A T + + + I + F Y D H E Sbjct: 431 -DAIWEAATEALRNAIEAKGIPYVINPGDGAF----------------YGPKLDYHIE-- 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRV 324 DSL R + G I +LP + G DG+ H + + G+M Sbjct: 472 -DSL-------GRTWQCGTI---QLDMNLPERFQIEYVGEDGQKHRPIMIHRACFGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++ I + H + +D ++++ +V DD Sbjct: 521 FIGILTEHYAGA---FPTWMAPVQVKILPISEKHVEYAKDLAKQMHRDYVRVEV----DD 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E+IG + A + P ++VG K V + V ++ Sbjct: 574 RSEKIGYKIRQAQMAKVPYMLVVGDKEVEEGTVNVR 609 >gi|187734550|ref|YP_001876662.1| prolyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] gi|259511572|sp|B2UL92|SYP_AKKM8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|187424602|gb|ACD03881.1| prolyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 506 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/296 (21%), Positives = 106/296 (35%), Gaps = 66/296 (22%) Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 +E+ + ++ GK + + + PT E V+ F SYR+LP Q R Sbjct: 100 LEAQKDEATGKTRMIPTGELTEPFVIRPTSETVIGAAFARWTSSYRDLPLKVNQWCNVMR 159 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 E+RPR +R+ EFL ++ ++ T E + M Y Sbjct: 160 WEMRPRI-FLRTAEFLWQEGHTAHETREEAIEETLTMHKVY------------------- 199 Query: 201 PIGGDLSHEFIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAAT 259 EF +D + P IP E T+ + Y Sbjct: 200 -------EEF-------------QRDVLAIPTIPGEKTEAERFPGAEQT-------YTVE 232 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 + V + K I+ G + G +S + F G D + S+G+ Sbjct: 233 AMVQDRK--------------AIQAGTSHFLGQNFSKSQNICFAGRDNTQQFAWTSSWGV 278 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD---QVCRDACEKIYARL 372 + R++ A+I D G++ P VAP +I +I + + Q D CE++ L Sbjct: 279 -STRMIGALIMMHSDDDGLVCPPRVAPQQIVIIPVTPKEESRQAVLDHCEELARTL 333 >gi|160871539|ref|ZP_02061671.1| threonyl-tRNA synthetase [Rickettsiella grylli] gi|159120338|gb|EDP45676.1| threonyl-tRNA synthetase [Rickettsiella grylli] Length = 642 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 87/406 (21%), Positives = 156/406 (38%), Gaps = 60/406 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + IR + E+ P L + LW +SG +D + K Sbjct: 255 VQEEAPGMVFWHPRGWTVYQRIEQYIRSCLKKAAYQEIQTPQLLARQLWEKSGHWDKFFK 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 EM N + I P IF IKSYR+LP + R+E G++ Sbjct: 315 EMFTTVTENTEFAI-KPMSCPGHIQIFNQGIKSYRDLPLRLAEFGSCHRNEPSGALHGLL 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGDL 206 R R F+ D + F E S F+ L ++ G + ++ + P +G + Sbjct: 374 RVRGFVQDDGHIF--CTEDQIQSEVSAFIDLLYNVYADFGFNDVILKLATRPEARVGSNA 431 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 S D E + + D + + +WT + + + K Sbjct: 432 S------WDKAEKALALALD-----------------ARKGL--EWTYAHGEGA-FYGPK 465 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-G 320 + SL ++ + I+ GT +S+P + A + G+ H M I G Sbjct: 466 IEFSLKDS---------LNRIWQCGTLQVDFSMPQRLGAEYVNERGERHVPVMLHRAILG 516 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCD 378 ++ ++ + G +W +AP +I ++ I K H ++I L + Sbjct: 517 SIERFIGILIEHYAGHFPLW---LAPTQIVIMTITDKQH-----HYAKEIAQELEALALR 568 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 V D E+I + L P Q+++G + V+ +V ++ R TG Sbjct: 569 VKLDLRNEKISFKIREHSLQKIPYQLVIGDQEVASKQVTVR-RQTG 613 >gi|229819712|ref|YP_002881238.1| tRNA synthetase class II (G H P and S) [Beutenbergia cavernae DSM 12333] gi|229565625|gb|ACQ79476.1| tRNA synthetase class II (G H P and S) [Beutenbergia cavernae DSM 12333] Length = 409 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 72/329 (21%), Positives = 130/329 (39%), Gaps = 52/329 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + A E+ +G + P L L+ SG + + EM Sbjct: 24 GLPLWLPDGAVIRGELEAFSLEQALASGCRRVYTPVLAKRSLFERSGHWAKFSGEMFPEM 83 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM-RSREFL 156 ++++ P + T +F + +SYR+LPF ++ FR EL G + R R+ Sbjct: 84 PLGGESLVLRPVNCPHHTQVFAAEGRSYRDLPFRLAEVGSMFRSELSGVVGGLSRVRQIN 143 Query: 157 MKDAYSF----------DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 + DA+SF L +H Y+ + + ++RL +R +SG GD Sbjct: 144 LDDAHSFCAPDQVADEVALALRAIRHCYDVLGIDV--AYYRLS-----VRGDSGSYLGD- 195 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 A ++ + + + +P E VE A Y DV + Sbjct: 196 ------DASWHRSERYLREALDELGLPYER------------VEGEAAIYGPKIDV---Q 234 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVV 325 + D+ + +S ++ FG T+ G DG H + G + +M + Sbjct: 235 VADARGREETLSTVQVDEQMPGRFGL--------TYTGDDGARHRPVLVHRGLLSSMERM 286 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINI 354 A++ HDG+ W +AP ++ ++ + Sbjct: 287 TALLVELHDGRMPTW---LAPVQVRVLPV 312 >gi|109898814|ref|YP_662069.1| threonyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] gi|109701095|gb|ABG41015.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] Length = 638 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 84/419 (20%), Positives = 155/419 (36%), Gaps = 44/419 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W G + +R + E+ P + LW +SG +D Y + Sbjct: 257 QEEAPGMVFWHNDGWSIYTELEKFVRSKLREYEYDEVKAPLMMDRSLWEKSGHWDKYAEN 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + IF +KSYR+LP + R+E G+MR Sbjct: 317 MFTTTSEKREYAV-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALHGLMR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F T + S I+ G ++I ++ + P S E Sbjct: 376 VRGFTQDDAHIF-CTDDQILAEVGGCIDSVYEIYKIFGFENISVKLSTRPEKRVGSDEVW 434 Query: 212 VLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ + SK +DF +P E + I L D Sbjct: 435 DKAEKELAEALTSKG-IDFQYLPGEGAFYGPKIEFT--------------------LHDC 473 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 L R + G + +S+P + +T+ DG+ M I G++ Sbjct: 474 LD-------RAWQCGTV---QLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G +W +AP + ++NI + + +K+ +L ++G D E+ Sbjct: 524 ILIEEYSGFFPLW---LAPTQAVVMNITDNQS---EYAQKVVKKLKEIGIRAKSDLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 IG + L P ++VG K + ++ ++ R MS++ I A + + + Sbjct: 578 IGFKIREHTLRRVPYLLVVGDKEIEAGEIAVRSRKGDDLGKMSVDAFIELACEQIKSKQ 636 >gi|329667761|gb|AEB93709.1| threonyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026] Length = 643 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 87/404 (21%), Positives = 163/404 (40%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I +++ G + P L + D + SG + Y +M Sbjct: 259 GLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNVDAYKTSGHWAHYRDDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 379 TLNDGHTF-VALDQIREEFAKVLKLIMDVYKDFDITDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M S D + L+ + E A Y D+ + +L + Sbjct: 424 PKNTDKYYANDEMWETSQSMLKAAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFGL----TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N +AH + +K+ A L+K G D E++G + Sbjct: 533 KGAFPTW---LAPVQAEIIPVNEEAHGEY----ADKVRAELAKRGFRAEVDHRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + P +++G + ++ + V ++ T + SL++ I Sbjct: 586 IRESQTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSLDDFI 629 >gi|238018994|ref|ZP_04599420.1| hypothetical protein VEIDISOL_00856 [Veillonella dispar ATCC 17748] gi|237864478|gb|EEP65768.1| hypothetical protein VEIDISOL_00856 [Veillonella dispar ATCC 17748] Length = 636 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 83/395 (21%), Positives = 157/395 (39%), Gaps = 47/395 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +I + G +LP G + + RE + E+ P + + LW SG + Y Sbjct: 256 VIKEEGPGFPFFLPKGMALRNELENFWREVHHEFDYEEIRTPIILNKQLWETSGHWFHY- 314 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +E + +D+ P + ++++ + SYR+ P + ++ L R EL G+ Sbjct: 315 RENMYTTIIDDEEYAIKPMNCPGGILVYQNEMHSYRDFPLRYAELGLVHRHELSGALHGL 374 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSH 208 R R F DA+ F + P+ + K+ + RI+ + GLK + + + GD Sbjct: 375 FRVRAFTQDDAHVF-MLPDQMQSELMKVIELFDRIYSQFGLKYHVELSTKPDNAMGD--- 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + I A T + + + I + F Y D H E Sbjct: 431 DAIWEAATEALRNAIEAKGIPYVINPGDGAF----------------YGPKLDYHIE--- 471 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 DSL R + G I +LP + G DG+ H + + G+M Sbjct: 472 DSL-------GRTWQCGTI---QLDMNLPERFQIEYVGEDGQKHRPIMIHRACFGSMERF 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP ++ ++ I + H + ++ ++++ +V DD Sbjct: 522 IGILTEHYAGA---FPTWMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEV----DDR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E+IG + A + P ++VG K V + V ++ Sbjct: 575 SEKIGYKIRQAQMAKVPYMLVVGDKEVEEGTVNVR 609 >gi|308233449|ref|ZP_07664186.1| threonyl-tRNA synthetase [Atopobium vaginae DSM 15829] gi|328944509|ref|ZP_08241970.1| threonine--tRNA ligase [Atopobium vaginae DSM 15829] gi|327490910|gb|EGF22688.1| threonine--tRNA ligase [Atopobium vaginae DSM 15829] Length = 592 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+++ G WLP G + + + +E Q + G ++ P + S LW SG +D Y Sbjct: 207 MVNEAGPGFPFWLPNGMRIRNALMNYWQEMQEKFGYEQIQTPVILSRKLWETSGHWDHY- 265 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +++ P + ++ + +SYR+LP + L R EL+ G+ Sbjct: 266 KENMYTTKIDEEDFAIKPMNCPGACLVYMNKPRSYRDLPLKLAEAGLDHRHELKGTLHGL 325 Query: 150 MRSREFLMKDAYSF 163 R REF DA+ F Sbjct: 326 FRVREFTQDDAHLF 339 >gi|260433159|ref|ZP_05787130.1| threonyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] gi|260416987|gb|EEX10246.1| threonyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] Length = 652 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 14/206 (6%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +L+E A+ KL + H + + G W P G + +R +Q Sbjct: 238 KAYLHMLEEA---AKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWTIYTQLQDYMRRQQR 294 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDI 117 R G +E++ P + LW SG +D Y + M + R P + +I Sbjct: 295 RGGYVEVNTPQVVDRKLWERSGHWDKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVEI 354 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 F+ +KSYR+LP + R E G+MR R F DA+ F + E Sbjct: 355 FKQGLKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRGFAQDDAHIF--STEDQIGDECA 412 Query: 177 MFVSYLR-IFHRLGLKSIPMRAESGP 201 F+ +L ++ LG S ++ P Sbjct: 413 RFIGFLTDVYKDLGFDSFKVKFSDRP 438 >gi|146311380|ref|YP_001176454.1| threonyl-tRNA synthetase [Enterobacter sp. 638] gi|166987323|sp|A4W9M3|SYT_ENT38 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145318256|gb|ABP60403.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Enterobacter sp. 638] Length = 642 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 86/411 (20%), Positives = 153/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + N ++ G + I ++ + P IG D + Sbjct: 375 RVRGFTQDDAHIF-CTEGQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 D E + + + + P + + A Y + L Sbjct: 434 ------WDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G++ Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPQRLSASYVGEDNERQIPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI D +++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQA---DYVKELTQKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R + + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSLDVNEVI 625 >gi|291085451|ref|ZP_06353132.2| threonine--tRNA ligase [Citrobacter youngae ATCC 29220] gi|291071041|gb|EFE09150.1| threonine--tRNA ligase [Citrobacter youngae ATCC 29220] Length = 622 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 86/411 (20%), Positives = 153/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 412 ----EMWDRAEADLAVALEENNIPFEFQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G + + M I G+M Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGENNERQVPVMIHRAILGSMER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R + + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNEVI 605 >gi|167562968|ref|ZP_02355884.1| threonyl-tRNA synthetase [Burkholderia oklahomensis EO147] Length = 635 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 13/176 (7%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + S G+ W P G V +R + G +E+ P + LW SG + +Y + Sbjct: 255 IQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAVKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKH--SYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 G+MR R F+ DA+ F + + ++NK+ +S ++ G I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEEQINSEAIAFNKLAMS---VYEDFGFDRIDIKLSLRP 423 >gi|145589014|ref|YP_001155611.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189083617|sp|A4SX33|SYT_POLSQ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145047420|gb|ABP34047.1| Ser-tRNA(Thr) hydrolase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 640 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 83/397 (20%), Positives = 150/397 (37%), Gaps = 50/397 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W P G V +R G E+ P + LW +SG +D+Y KE Sbjct: 256 QEEAPGLIFWHPKGWSIWQEVEQYMRRVYQNEGYQEVKAPQILDRGLWEKSGHWDNY-KE 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + + ++A P + I+ S + SYR LP F + R+E G+MR Sbjct: 315 NMFTTESENRAYALKPMNCPGHVQIYNSGLHSYRELPLRFGEFGQCHRNEPSGALHGLMR 374 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP---IGGDLS 207 R F D + F E S F +R ++ G + ++ P +G D Sbjct: 375 VRGFTQDDGHIF--CTEDQIQSEVAAFDKAVRAVYQDFGFTEVAVKLALRPAKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E D + + + +++++ + Y + H L Sbjct: 431 ----AIWDKAE-------DALRGALKASGQEWEELPGEGAF-------YGPKIEYH---L 469 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRV 324 DS+ R + G I +S+P + A + D + V + +G++ Sbjct: 470 KDSI-------GRTWQCGTI---QVDFSMPARLGAEYVAEDNSRKTPVMLHRAIVGSLER 519 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ +H G +W +AP + ++NI + +K+ L K G V D Sbjct: 520 FIGILIENHAGNMPVW---LAPTQAVVLNISGNSAAY---AQKVQQSLKKQGFRVESDLR 573 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P ++VG K + V ++ R Sbjct: 574 NEKITYKIREHALQKIPFLLVVGDKESESNTVAVRAR 610 >gi|3617770|emb|CAA74705.1| threonyl-tRNA synthetase [Arabidopsis thaliana] Length = 709 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 13/173 (7%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIR 58 ++ K +L L+E A+ H+L+ + + HQ S G Y +LPLG + + + I+ Sbjct: 300 KQLKKYLQFLEE----AKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIK 355 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTD 116 + G E+ P + + +LW SG D+Y M N + +G P + Sbjct: 356 NQYWHRGYTEVITPNMYNMELWQTSGHADNYKDNMFTF---NIEKQEFGLKPMNCPGHCL 412 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 IF+ ++SYR LP + R+E G+ R R F DA+ F T + Sbjct: 413 IFQHRVRSYRELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQ 465 >gi|2191162|gb|AAB61048.1| Similar to threonyl-tRNA synthetase; coded for by A. thaliana cDNA R65376 [Arabidopsis thaliana] Length = 702 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 13/173 (7%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIR 58 ++ K +L L+E A+ H+L+ + + HQ S G Y +LPLG + + + I+ Sbjct: 280 KQLKKYLQFLEE----AKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIK 335 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTD 116 + G E+ P + + +LW SG D+Y M N + +G P + Sbjct: 336 NQYWHRGYTEVITPNMYNMELWQTSGHADNYKDNMFTF---NIEKQEFGLKPMNCPGHCL 392 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 IF+ ++SYR LP + R+E G+ R R F DA+ F T + Sbjct: 393 IFQHRVRSYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQ 445 >gi|20808138|ref|NP_623309.1| threonyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|22654110|sp|Q8R9A4|SYT_THETN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|20516726|gb|AAM24913.1| Threonyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] Length = 644 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 3/138 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 IH G + P G + + R+E + G E+ P + + +LW SG +D Y K Sbjct: 264 IHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKRGYQEIRTPIILNEELWKRSGHWDHY-K 322 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + +++S ++SYR+LP ++ L R EL G+M Sbjct: 323 ENMYFTEIDGQTYAIKPMNCPGAMLVYKSTLRSYRDLPLRLCELGLVHRHELSGVLHGLM 382 Query: 151 RSREFLMKDAYSFDLTPE 168 R R F DA+ F +TPE Sbjct: 383 RVRSFTQDDAHLF-MTPE 399 Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 9/135 (6%) Query: 304 GADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVC 361 G DG+ H + + G++ ++ G +P +AP ++ ++ I + H + Sbjct: 506 GPDGEKHRPIMLHRVIYGSIERFIGILTEHFAGA---FPTWLAPVQVRVLPISEKHHEYA 562 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 R K+Y RL + V DD E+IG + A L P +IVG + V + V ++ R Sbjct: 563 R----KVYERLQEHDIRVELDDRNEKIGYKIREAQLQKIPYMLIVGDREVEEGNVSLRSR 618 Query: 422 LTGIREDMSLEEVIN 436 G +SL+ I Sbjct: 619 KDGDLGPISLDNFIE 633 >gi|296102767|ref|YP_003612913.1| threonyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057226|gb|ADF61964.1| threonyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 86/411 (20%), Positives = 153/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N ++ G + I ++ + P IG D + Sbjct: 375 RVRGFTQDDAHIF-CTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 D E + + + P + + A Y + L Sbjct: 434 ------WDRAEADLAVALEENGIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G++ Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPQRLSASYVGEDNERQVPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI D +++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQA---DYVKELTQKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R + + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVI 625 >gi|294793964|ref|ZP_06759101.1| threonine--tRNA ligase [Veillonella sp. 3_1_44] gi|294455534|gb|EFG23906.1| threonine--tRNA ligase [Veillonella sp. 3_1_44] Length = 636 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 85/396 (21%), Positives = 157/396 (39%), Gaps = 49/396 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +I + G +LP G + + RE + E+ P + + LW SG + Y Sbjct: 256 VIKEEGPGFPFFLPKGMALRNELENFWREVHHEFEYEEIRTPIILNKQLWETSGHWFHYR 315 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M + D + A+ P + ++++ + SYR+ P + ++ L R EL G Sbjct: 316 ENMYTTIIDEEEYAI--KPMNCPGGILVYQNEMHSYRDFPLRYAELGLVHRHELSGALHG 373 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLS 207 + R R F DA+ F + P + K+ + RI+ + GLK + + + GD Sbjct: 374 LFRVRAFTQDDAHVF-MLPSQMQSELMKVIELFDRIYSQFGLKYHVELSTKPDNAMGD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + I A T + + + I + F Y D H E Sbjct: 431 -DAIWEAATEALRNAIEAKGIPYVINPGDGAF----------------YGPKLDYHIE-- 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRV 324 DSL R + G I +LP + G DG+ H + + G+M Sbjct: 472 -DSL-------GRTWQCGTI---QLDMNLPERFQIEYVGEDGQKHRPIMIHRACFGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++ I + H + +D ++++ +V DD Sbjct: 521 FIGILTEHYAGA---FPTWMAPVQVKILPISEKHVEYAKDLAKQMHRDYVRVEV----DD 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E+IG + A + P ++VG K V + V ++ Sbjct: 574 RSEKIGYKIRQAQMAKVPYMLVVGDKEVEEGTVNVR 609 >gi|310767522|gb|ADP12472.1| threonyl-tRNA synthetase [Erwinia sp. Ejp617] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 91/428 (21%), Positives = 154/428 (35%), Gaps = 56/428 (13%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + Y L I + RD +L L + + + G+ W G + +R + Sbjct: 230 AAYLLRIEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKE 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW ++G +D+Y + M + N + I P + IF +K Sbjct: 288 YQYQEVKGPFMMDRVLWEKTGHWDNYKEAMFTTSSENREYCI-KPMNCPGHVQIFNQGLK 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F T E + N Sbjct: 347 SYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVY 405 Query: 183 RIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSEN 236 + G + I ++ + P IG D L D E + + D P P E Sbjct: 406 DTYSTFGFEKIVVKLSTRPEKRIGSD------DLWDRSEADLAAALKENDIPFEYQPGEG 459 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + I L D L R + G + +SL Sbjct: 460 AFYGPKIEFT--------------------LHDCLD-------RAWQCGTV---QLDFSL 489 Query: 297 P--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 P ++A++ G + M I G+M ++ + G +P +AP ++ ++N Sbjct: 490 PGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEYAG---FFPTWLAPVQVVVMN 546 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I + ++ +L G D E+IG + L P ++ G K V Sbjct: 547 ITDGQS---EYVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEA 603 Query: 414 SKVEIKHR 421 KV ++ R Sbjct: 604 GKVAVRTR 611 >gi|167570156|ref|ZP_02363030.1| threonyl-tRNA synthetase [Burkholderia oklahomensis C6786] Length = 635 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 13/176 (7%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + S G+ W P G V +R + G +E+ P + LW SG + +Y + Sbjct: 255 IQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAVKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKH--SYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 G+MR R F+ DA+ F + + ++NK+ +S ++ G I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEEQINSEAIAFNKLAMS---VYEDFGFDRIDIKLSLRP 423 >gi|238791701|ref|ZP_04635338.1| Threonyl-tRNA synthetase [Yersinia intermedia ATCC 29909] gi|238728805|gb|EEQ20322.1| Threonyl-tRNA synthetase [Yersinia intermedia ATCC 29909] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 79/394 (20%), Positives = 141/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + N ++ G + I ++ + P S + Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDDL 433 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ D P E + I L D Sbjct: 434 WTRAEDDLAAALTENDIPFEYQPGEGAFYGPKIEFT--------------------LHDC 473 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 L R + G + +SLP +SA++ G + M I G+M Sbjct: 474 LD-------RAWQCGTV---QLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G +P +AP ++ ++NI D +++ +L G D E+ Sbjct: 524 ILTEEYAG---FFPTWLAPVQVVVMNITDSQS---DYVQQVTKKLQDAGIRAKADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++ G K V K+ ++ R Sbjct: 578 IGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTR 611 >gi|163795474|ref|ZP_02189441.1| Threonyl-tRNA synthetase [alpha proteobacterium BAL199] gi|159179460|gb|EDP63991.1| Threonyl-tRNA synthetase [alpha proteobacterium BAL199] Length = 640 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 4/172 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G W P G + IR G E+ P L LW SG +D + + Sbjct: 256 IQEEAVGSVFWHPKGWTLYRVIENYIRGRLEEGGYREIKTPQLIDRALWEASGHWDKFRE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M +DK + P + +++ +KSYR+LP + R+E G+M Sbjct: 316 AMFTANAEDDKVLALKPMNCPGHVQVYKQGLKSYRDLPLRLAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR-LGLKSIPMRAESGP 201 R R F DA+ F E S + F L+ +R G + I ++ P Sbjct: 376 RVRAFTQDDAHIF--CTEDQITSESIRFCDLLKSVYRDFGFEDIRIKFSDRP 425 >gi|15081626|gb|AAK82468.1| AT5g26830/F2P16_90 [Arabidopsis thaliana] gi|29028762|gb|AAO64760.1| At5g26830/F2P16_90 [Arabidopsis thaliana] Length = 676 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 13/173 (7%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIR 58 ++ K +L L+E A+ H+L+ + + HQ S G Y +LPLG + + + I+ Sbjct: 267 KQLKKYLQFLEE----AKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIK 322 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTD 116 + G E+ P + + +LW SG D+Y M N + +G P + Sbjct: 323 NQYWHRGYTEVITPNMYNMELWQTSGHADNYKDNMFTF---NIEKQEFGLKPMNCPGHCL 379 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 IF+ ++SYR LP + R+E G+ R R F DA+ F T + Sbjct: 380 IFQHRVRSYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQ 432 >gi|50086067|ref|YP_047577.1| threonyl-tRNA synthetase [Acinetobacter sp. ADP1] gi|73919764|sp|Q6F860|SYT_ACIAD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|49532043|emb|CAG69755.1| threonyl-tRNA synthetase [Acinetobacter sp. ADP1] Length = 640 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 81/400 (20%), Positives = 150/400 (37%), Gaps = 54/400 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q G E+ P + LW +SG +Y + Sbjct: 255 MQEEAPGMVFWHANGWTIYQALEQYMRKVQQDNGYQEVRTPQIVDFTLWEKSGHAANYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSESRNYAV-KPMNCPCHVQVFNQGLKSYRDLPVRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDGHIF-CTKEQIGKEVADFIQLTLDVYKDFGFEDVQMKLSTRPEKRVGDDR- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L++ +W + K+ Sbjct: 432 -----LWDLAE------KSLAD--------------ALDAAGLEWEL-QPGEGAFYGPKI 465 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP + A+F D +D V + +G+ Sbjct: 466 EFSLKDC---------LGRVWQCGTIQCDFNLPIRLDASFVTEDNERDQPVMLHRAILGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P +AP + ++NI +AC+++ A+L + G Sbjct: 517 FERFIGILIEHYAG---FMPPWLAPVQACVMNITDSQA---EACQQVVAKLKENGLRAIS 570 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + L P +++G + V + V ++ R Sbjct: 571 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTR 610 >gi|315038857|ref|YP_004032425.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|312276990|gb|ADQ59630.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] Length = 645 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 86/405 (21%), Positives = 160/405 (39%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I + + G + P L + D + SG + Y +M Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALDQVQDEFAKILKLIMDVYKDFDITDYYFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + + D M D + L+ + E A Y D+ + +L + Sbjct: 425 PKNTEKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFGL----TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N AH + EK+ L+K G D+ E++G + Sbjct: 534 KGAFPTW---LAPIQAEIIPVNNDAHGEY----AEKVRQELAKRGFRAEVDNRNEKMGYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G + + + V ++ T SL++ I Sbjct: 587 IRESQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLDDFIK 631 >gi|319405749|emb|CBI79372.1| Threonyl-tRNA synthetase [Bartonella sp. AR 15-3] Length = 654 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 21/215 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H+ + R + H + S G+ W P G K N+ + +R Sbjct: 233 KAYLHMLEE----AEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRL 288 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL---ADRNDKAMIYG--PTHEEVMTD 116 + E+ P + LW SG ++ Y + M + AD + IY P + Sbjct: 289 DNHKYAEVQAPQVLDKSLWEISGHWEWYKENMFKTIPAADDWNNEHIYALKPMNCPGHVQ 348 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKH--S 173 IF+ +KSYR+LP + L R E G+MR R F DA+ F + + S Sbjct: 349 IFKHGLKSYRDLPIRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEEQLADECLS 408 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 N + +S + G K I ++ + P +G D Sbjct: 409 INDLILS---TYADFGFKEISIKLSTRPEKRVGSD 440 >gi|261339515|ref|ZP_05967373.1| threonine--tRNA ligase [Enterobacter cancerogenus ATCC 35316] gi|288318328|gb|EFC57266.1| threonine--tRNA ligase [Enterobacter cancerogenus ATCC 35316] Length = 622 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 86/411 (20%), Positives = 153/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N ++ G + I ++ + P IG D + Sbjct: 355 RVRGFTQDDAHIF-CTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 413 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 D E + + + P + + A Y + L Sbjct: 414 ------WDRAEADLAVALEENGIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G++ Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPQRLSASYVGEDNERQVPVMIHRAILGSLER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI D +++ +L G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQA---DYVKELTQKLQNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R + + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVI 605 >gi|253577580|ref|ZP_04854892.1| threonyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843049|gb|EES71085.1| threonyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 645 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 87/423 (20%), Positives = 168/423 (39%), Gaps = 55/423 (13%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ WLP G + I + + R G + P L + DL+ SG ++ Y ++M Sbjct: 263 GQGLPIWLPKGATVRRTLERYIVDIEERLGYQHVYTPVLGNVDLYKTSGHWEHYQEDMFP 322 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + + P + +++S ++SYR+LP ++ ++ R E+ G+ R R Sbjct: 323 KMAIDTEEFVLRPMNCPHHMMVYKSDMRSYRDLPIRIAELGMQHRYEMSGALTGLHRVRS 382 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + DA+ F + K + ++ ++++ G+ R LS+ Sbjct: 383 MTLNDAHIF-CRLDQIKDEFKRVLDLIKQVYNDFGIHEYRFR---------LSYR----- 427 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP----------YAATSDVHN 264 D +T+ + D M NT L +VE+ P Y DV Sbjct: 428 DPQDTEKYYQNDEM------WNTAQR---MLREVVEEAGLPFFEAEGEAAFYGPKLDV-- 476 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMR 323 ++ +L + + +S I+ F ++ L + G DG+ H + GI G M Sbjct: 477 -QIKTALGKEETLSTVQID----FLLPERFEL----EYVGDDGQKHRPVVLHRGILGTME 527 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWD 382 A + + G +W +AP + ++ + ++ D R +K+ A G D Sbjct: 528 RFTAFLLENFAGNLPLW---LAPVQAKVLPVSSNFDAYARQVEDKLRA----AGIRAESD 580 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 E++G + A L P ++VG + V ++ R G +++EVI Sbjct: 581 LRNEKLGYKIREAQLEKLPYMLVVGENEQNAGTVSVRKRGQGDLGAKAVDEVIAQLQEEI 640 Query: 443 SNN 445 N+ Sbjct: 641 RNH 643 >gi|62422036|gb|AAX82600.1| putative threonyl-tRNA synthetase [Lactobacillus reuteri] Length = 601 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 85/409 (20%), Positives = 161/409 (39%), Gaps = 47/409 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I + + G + P L + D + SG + Y +M Sbjct: 217 GLPYWLPKGATIRRTIERYIIDREVADGHQHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 276 Query: 98 DRNDKAMIYG-----PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D D M+ P+H +V ++ HI+SYR+LP ++ + R E G+ R Sbjct: 277 DMGDGEMLESRPMNCPSHIQV----YKHHIRSYRDLPLRIAELGMMHRYEKSGALSGLQR 332 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE + D ++F +T + + + K+ + ++ + R + Sbjct: 333 VREMTLNDGHTF-VTLDQIRSEFAKILKLIMSVYEDFDITDYSFR--------------L 377 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDS 270 L D + + + D M S D ++L+ E A Y D+ + + Sbjct: 378 SLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLNLDYYEAEGEAAFYGPKLDIQTKT---A 434 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVI 329 L ++ +S ++ F ++ L ++ G DGK+H M G +G M A + Sbjct: 435 LGNDETMSTIQLD----FMLPERFGL----SYVGQDGKEHQPVMIHRGVVGTMERFMAYL 486 Query: 330 ESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 + G W +AP ++ +I N +AH + + +K+ A +V E+ Sbjct: 487 TEIYKGAFPTW---LAPEQVHIIPVNEEAHGEYADNLAKKMKAANIRVNV----AHRNEK 539 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +G + A P ++VG + + V + + +MS E +N Sbjct: 540 MGYKIREAQTQKVPYTLVVGDDEKNSNGVSVSKYGEKEQNEMSQEAFMN 588 >gi|167520264|ref|XP_001744471.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776802|gb|EDQ90420.1| predicted protein [Monosiga brevicollis MX1] Length = 473 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 7/174 (4%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G + + A++R + G E+ P + LW SG ++ Y ++M Sbjct: 89 SPGAPFWLPHGLRIFKRLEALVRGVHSNYGFEEVKSPLVYKQHLWNTSGHWEHYSEDMTV 148 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 L + D+ + P + +F SYR LP F + R+E G+ R Sbjct: 149 LQHKEDEEVCQALKPMNCPAHCIMFSHEPHSYRELPLRFAEHSALHRNEASGALSGLTRV 208 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS---IPMRAESGPIG 203 R+F D + F P+ + + ++ RLGL + R E+G +G Sbjct: 209 RQFHQDDGHIF-CRPDQVSSEVARCLEAIGVVYARLGLTPTAVLSTRPETGYVG 261 >gi|30690426|ref|NP_198035.2| threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS) [Arabidopsis thaliana] gi|27735258|sp|O04630|SYTM_ARATH RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; Flags: Precursor gi|332006227|gb|AED93610.1| threonyl-tRNA synthetase [Arabidopsis thaliana] Length = 709 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 13/173 (7%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIR 58 ++ K +L L+E A+ H+L+ + + HQ S G Y +LPLG + + + I+ Sbjct: 300 KQLKKYLQFLEE----AKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIK 355 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTD 116 + G E+ P + + +LW SG D+Y M N + +G P + Sbjct: 356 NQYWHRGYTEVITPNMYNMELWQTSGHADNYKDNMFTF---NIEKQEFGLKPMNCPGHCL 412 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 IF+ ++SYR LP + R+E G+ R R F DA+ F T + Sbjct: 413 IFQHRVRSYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQ 465 >gi|237731269|ref|ZP_04561750.1| threonyl-tRNA synthetase [Citrobacter sp. 30_2] gi|226906808|gb|EEH92726.1| threonyl-tRNA synthetase [Citrobacter sp. 30_2] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 86/411 (20%), Positives = 153/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEFQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G + + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGENNERQVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R + + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNEVI 625 >gi|330888315|gb|EGH20976.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020] Length = 402 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 5/151 (3%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ R G+ H + + G+ W P G + +R+ Q G +E+ P Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y M + I P + +F +KSYR LP Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTESESRDYAI-KPMNCPCHVQVFNQGLKSYRELPMRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + R+E G+MR R F DA+ F Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF 386 >gi|259908578|ref|YP_002648934.1| threonyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|224964200|emb|CAX55707.1| Threonyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|283478547|emb|CAY74463.1| thrS [Erwinia pyrifoliae DSM 12163] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 91/428 (21%), Positives = 154/428 (35%), Gaps = 56/428 (13%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + Y L I + RD +L L + + + G+ W G + +R + Sbjct: 230 AAYLLRIEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKE 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW ++G +D+Y + M + N + I P + IF +K Sbjct: 288 YQYQEVKGPFMMDRVLWEKTGHWDNYKEAMFTTSSENREYCI-KPMNCPGHVQIFNQGLK 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F T E + N Sbjct: 347 SYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVY 405 Query: 183 RIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSEN 236 + G + I ++ + P IG D L D E + + D P P E Sbjct: 406 DTYSTFGFEKIVVKLSTRPEKRIGSD------DLWDRSEADLAAALKENDIPFEYQPGEG 459 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + I L D L R + G + +SL Sbjct: 460 AFYGPKIEFT--------------------LHDCLD-------RAWQCGTV---QLDFSL 489 Query: 297 P--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 P ++A++ G + M I G+M ++ + G +P +AP ++ ++N Sbjct: 490 PGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEYAG---FFPTWLAPVQVVVMN 546 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I + ++ +L G D E+IG + L P ++ G K V Sbjct: 547 ITDGQS---EYVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEA 603 Query: 414 SKVEIKHR 421 KV ++ R Sbjct: 604 GKVAVRTR 611 >gi|297527450|ref|YP_003669474.1| threonyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] gi|297256366|gb|ADI32575.1| threonyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] Length = 614 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 77/367 (20%), Positives = 150/367 (40%), Gaps = 53/367 (14%) Query: 89 YGKEMLRLADRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 +G + L N+K ++ Y H++ + R I SY+NLPF +++ +R E R Sbjct: 268 FGDRLYELKVDNEKFVLRYAACHQQFA--MLRDWIISYKNLPFGMFEVADSYRLEQRGEL 325 Query: 148 GV-MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 + R R+F M D H NK +++ + K + E IG Sbjct: 326 NLCFRLRKFYMPDL-----------HILNKDLDEAIKMSRIVQDKIL---EEIAKIGRKY 371 Query: 207 SHEFIVLADTGETQVFCSKDFM---DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 + V +D E +F+ ++P+ L S++ + + H Sbjct: 372 VALYNVTSDFFEKHRDVLIEFVRRENYPV------------LVSVIPSGIYYWVLNVEYH 419 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI--GA 321 + D+L + ++ I++G+ G ++++ T+ G+ H+ + I G Sbjct: 420 ---IIDNLNRPREIATFQIDIGN----GKRFNI----TYTDEKGEKHHPVIIHTAIIGGI 468 Query: 322 MRVVAAVIESS----HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 R + + +++ +GK P +AP ++ +I IK D EK+ ++ G Sbjct: 469 ERFIYTIFDTAALMEREGKTPYIPTWLAPVQVRIIPIKNK---YLDYAEKVAEKIENAGF 525 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD GE +G + A P V++G + V + + ++ R T ++ M +E+I Sbjct: 526 RVDIDDRGESLGKKIRDAGREWIPYIVVIGEREVKSNTINVRIRRTNDQKVMVTDELIRI 585 Query: 438 ASHRFSN 444 N Sbjct: 586 LEEETKN 592 >gi|239623178|ref|ZP_04666209.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522545|gb|EEQ62411.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 643 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 92/414 (22%), Positives = 158/414 (38%), Gaps = 53/414 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + G +LP G + + RE R G E+S P + S LW SG +D Y Sbjct: 262 MFAEEGPGFPFFLPKGMTLKNTLIDYWREIHQREGYQEVSTPIILSRKLWENSGHWDHYK 321 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M + D D A+ P + ++++ SYR+LP ++ L R E + G Sbjct: 322 DNMYTTVIDEEDYAV--KPMNCPGGMLVYKNQPHSYRDLPLRVGELGLVHRHEKSGQLHG 379 Query: 149 VMRSREFLMKDAYSF--DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 +MR R F DA+ F D E ++ ++ + G + Sbjct: 380 LMRVRCFTQDDAHIFMRDDQIEDEIKGVTRLINE---VYTQFGFEY-------------- 422 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT-APYAATSDVHNE 265 F+ L+ E + +D+ + DD + L IV + A Y D H Sbjct: 423 ---FVELSTRPEDSMGSDEDW-EMATNGLKKALDD-MGLEYIVNEGDGAFYGPKIDFH-- 475 Query: 266 KLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGA 321 L DSL R + G I F ++ L +A DG K + + G+ Sbjct: 476 -LRDSL-------GRTWQCGTIQLDFQMPQRFDLEYTA----EDGSKKRPIMIHRVCFGS 523 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + ++ GK +W +AP ++ +I + + + +Y +L G Sbjct: 524 IERFIGILIEHFAGKFPVW---LAPVQVKVIPVS---EKSMEYATGVYEKLKAAGIRTEL 577 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E++G + A L P +++G K ++ + ++ R G LE+ I Sbjct: 578 DHKDEKVGYKIRQAQLEKVPYMLVLGEKEAAEGAITVRSRDKGDLGAAVLEDFI 631 >gi|87198229|ref|YP_495486.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium aromaticivorans DSM 12444] gi|123749972|sp|Q2GBX1|SYT_NOVAD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|87133910|gb|ABD24652.1| Ser-tRNA(Thr) hydrolase [Novosphingobium aromaticivorans DSM 12444] Length = 664 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 97/435 (22%), Positives = 158/435 (36%), Gaps = 78/435 (17%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G W P G + A +R + G E+ P + A W +SG + Y + Sbjct: 263 LQQEAHGSVFWHPKGYLIWRELEAYMRRAIDGAGYREVKTPQVMDARQWEQSGHWGKYRE 322 Query: 92 EMLRLADR------------NDK-AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 M + D ND M P + IFR IKSYR LP Y+ Sbjct: 323 NMFVIPDEVPNVDDEGPIVSNDADWMALKPMNCPAHVLIFRQGIKSYRELPLRLYENGCC 382 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLK---SI 193 R+E G+MR R+F DA+ F E S + F RI+ G + Sbjct: 383 HRNEPHGALHGLMRVRQFTQDDAHIF--CREDQIVSEVQAFCELADRIYKHFGFTYSIKL 440 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 +R E + F +++ D +E D ++ E++ Sbjct: 441 ALRPE---------------------KRFGTEEMWD---KAERELRDAVVRAGLATEEYG 476 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIE------VGHIFYFGTKYS---LP--MSATF 302 ++ LP A +E +G + GT S LP + A++ Sbjct: 477 --------------WEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASY 522 Query: 303 KGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQV 360 G DG+ H M I G+ ++ G+ +W +AP + + I + D Sbjct: 523 IGEDGEKHRPVMLHRAIFGSYERFIGILIEHFAGRLPVW---LAPVQAVVATIVSDADDY 579 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 RDA K+ A + D+ E+I + L P ++VG + + V I+ Sbjct: 580 ARDALAKLKAAGIRADTDL----RNEKINYKVREHSLQKVPYLLVVGKREAEEGTVAIRI 635 Query: 421 RLTGIREDMSLEEVI 435 ++ M L+E I Sbjct: 636 LGEQHQKVMPLDEAI 650 >gi|262382112|ref|ZP_06075250.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_33B] gi|298375301|ref|ZP_06985258.1| threonine--tRNA ligase [Bacteroides sp. 3_1_19] gi|262297289|gb|EEY85219.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_33B] gi|298267801|gb|EFI09457.1| threonine--tRNA ligase [Bacteroides sp. 3_1_19] Length = 651 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 88/413 (21%), Positives = 152/413 (36%), Gaps = 63/413 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + +R Q R E+ P + + L++ SG Y YGK+ + Sbjct: 261 KGLPMWLPKGTALRLRLQEFLRRIQARYNYQEVMCPPIGNKLLYITSGHYAKYGKDSFQP 320 Query: 97 ADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ Y P + I+++ +SY++LP + R E G+ R R Sbjct: 321 IHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K + + +F + ++ + I L Sbjct: 381 SFTQDDAHIF-CRPDQVKQEFLNVMDIISIVFKTMNFENFEAQ--------------ISL 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A + EK + E Sbjct: 426 RDKVNREKYIGSD-----------------------ENWEKAEQAIVEACEEKGLKAKIE 462 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP + GAD + H V + Sbjct: 463 YGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPF 522 Query: 320 GAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G+M R VA +IE + GK +W + P ++ ++ I + D +I L Sbjct: 523 GSMERFVAVLIEHTA-GKFPLW---LTPEQVCIMPI---SEKFNDYAWQIARELGNQEIR 575 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 DD E+IG + +L P +IVG K + +V ++ + G + M + Sbjct: 576 AIVDDRNEKIGRKIRDNELKRIPYMLIVGEKEAENGEVSVRKQGEGDKGSMKI 628 >gi|86608959|ref|YP_477721.1| threonyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557501|gb|ABD02458.1| threonyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 603 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 8/166 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +++EQ + G + + P + DL+ SG + Y ++M + Sbjct: 223 GLPLWTPKGTTLRWVLEDFLKQEQLKRGYLPVVTPHIARVDLFKISGHWQKYREDMFPMM 282 Query: 98 DRNDKA------MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 N++A + P + I++S ++SYR+LP + + +R E G+ Sbjct: 283 AENEQARAAEQGFVMKPMNCPFHIQIYKSELRSYRDLPLRYAEFGTVYRYEQSGELGGLT 342 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R R F + DA+ F + P+ + + K+ L +F +L LK R Sbjct: 343 RVRGFTVDDAHLF-VRPDQLEEEFLKVVDLILVVFDKLKLKDFRAR 387 >gi|260575744|ref|ZP_05843741.1| threonyl-tRNA synthetase [Rhodobacter sp. SW2] gi|259022142|gb|EEW25441.1| threonyl-tRNA synthetase [Rhodobacter sp. SW2] Length = 648 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 92/423 (21%), Positives = 157/423 (37%), Gaps = 56/423 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + + +R Q G E+ P + LW SG +++Y + Sbjct: 260 LQEEAPGMVFWHPNGWQVWRTLEDYMRRRQREAGYREIRTPQVVDRVLWERSGHWEAYRE 319 Query: 92 EMLRL-----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + + + P + ++ +KSYR+LP + R E Sbjct: 320 NMFIVEVDEEGAKEKRINALKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGACHRYESSGS 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP--- 201 G+MR R F DA+ F E S F+ L ++H LG +S ++ + P Sbjct: 380 MHGLMRVRGFTQDDAHIF--CTEAQIESECAAFIELLSSVYHDLGFESFDIKLSTRPEVR 437 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD 261 IG D + + A + +D P E A Y D Sbjct: 438 IGTDEDWDRVETALENAIKKVGRSYVID---PGEG-----------------AFYGPKLD 477 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI 319 KL D++ R + G F +LP + A + G DG H M I Sbjct: 478 F---KLTDAI-------GRQWQCG---TFQVDPNLPSRLGAEYIGEDGARHRPFMLHRAI 524 Query: 320 -GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G+ ++ ++ GK W +AP ++ + I + ++ A L K G Sbjct: 525 LGSFERFLGILIENYAGKLPFW---LAPRQVVVAGIVSDADAY---VHEVVAELRKAGVR 578 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM-SLEEVINY 437 D E+I + + P+ + +G K V + V ++ RL R D SL ++ Sbjct: 579 AEADVRNEKINYKVREHSVGKVPVILAIGMKEVEERSVSVR-RLGETRTDSESLTGIVAT 637 Query: 438 ASH 440 +H Sbjct: 638 LAH 640 >gi|159028099|emb|CAO87176.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 618 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 84/415 (20%), Positives = 157/415 (37%), Gaps = 67/415 (16%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+ G + P L + DLW SG +D Y M Sbjct: 241 GLVFWHPRGATMRYLIEDYWRQAHLEAGYQFLYTPHLANLDLWKTSGHWDFYRDNMFEAI 300 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++ P + +++ + SYR P + ++ +R E G+MR R F Sbjct: 301 ELEQQSYQIKPMNCPFHVLTYQNDLHSYREFPLRWAELGTVYRYERSGVLHGLMRVRGFT 360 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F L PE + I G L+ +L+D Sbjct: 361 QDDAHIFCL-PEQI----------------------------AAEILGVLNLTEKILSDF 391 Query: 217 GET--QVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 G T Q+ S PS++ D + W AA + N K +D + + Sbjct: 392 GFTNYQINLSTR------PSKSVGSDSV---------WELATAALIEALNAKKWDYIEDQ 436 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + G + +G ++ T ++LP + DG ++ + + G Sbjct: 437 GGGAFYGPKIDIKIQDAIGRMWQCSTIQVDFNLPERFDMQYVARDGSRERPIMIHRAIFG 496 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ ++ G +W +AP ++ L+ + Q ++ +L + G V Sbjct: 497 SLERFFGILIENYAGDFPLW---LAPIQVRLLPVSDEQQ---HYALEVAVQLKQAGYRVE 550 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D GE++G Q +L P+ ++G + VS + I+ R G M+L +++ Sbjct: 551 IDKSGERLGKQIRTGELEKIPVLAVIGKREVSSKTLSIRTRQGGDLGSMTLADLL 605 >gi|118358180|ref|XP_001012338.1| glycyl-tRNA synthetase family protein [Tetrahymena thermophila] gi|89294105|gb|EAR92093.1| glycyl-tRNA synthetase family protein [Tetrahymena thermophila SB210] Length = 635 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 8/134 (5%) Query: 311 YVQMGSYGIGAMRVVAAVIESS---HDGKGIIW--PDSVAPFKISLINIKAHDQVCRDAC 365 YV S+G+G R+ +A++E S D K + P ++P K S++ + +H++ DA Sbjct: 478 YVIEPSFGVG--RIFSAILEHSFRMRDEKRTFFHLPPKISPIKCSILPVISHEKY-NDAI 534 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 K+ L+KVG DD G IG ++A D LG P + + + + D V ++ LT Sbjct: 535 HKLKVGLTKVGVSSKVDDTGHAIGRRYARTDELGIPFGITIDNDTLVDDSVTLREILTTK 594 Query: 426 REDMSLEEVINYAS 439 + + + +V S Sbjct: 595 QIRIPINDVFRVVS 608 >gi|330813582|ref|YP_004357821.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327486677|gb|AEA81082.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 638 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 86/436 (19%), Positives = 176/436 (40%), Gaps = 50/436 (11%) Query: 14 NPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 N +AE H+ + +T + H + S G W G + +R++Q G E++ Sbjct: 235 NLEEAEKRDHRKLGKTMDLFHFQEESPGAVFWHQKGWALFQTLVDFMRQKQLEAGYQEVN 294 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + LW +SG ++ + + M + +++ P + I+ +KSY++LP Sbjct: 295 TPEIIDRVLWEKSGHWEKFQEYMYTTSTPDERTFAIKPMNCPGHCQIYNQGLKSYKDLPL 354 Query: 131 TFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R E G+MR R F DA+ F + ++ S K+ L I+ G Sbjct: 355 KLSEFGKVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEDQITEESV-KVTKLILDIYKAFG 413 Query: 190 LKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 ++I ++ P +G D + D E + + I + D+ ++N Sbjct: 414 FENITLKYADRPAKRVGDD------SVWDQSEKALLEA-------IKASKVDY----TIN 456 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKG 304 + P L D++ + + +++ +LP + AT+ Sbjct: 457 KGEGAFYGPKIEFV------LRDAIGRDWQCGTLQVDL----------NLPGRLDATYVD 500 Query: 305 ADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DGK V + G++ ++ + GK +W ++P +++++ I D Sbjct: 501 KDGKKKTPVMLHRALFGSLERFTGILIEHYAGKLPLW---LSPVQVAILPINDEHH---D 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++I +L K+ D E+I + + P+ +I GSK V + + ++ Sbjct: 555 YAKEILNQLEKISIRPIIDLRNEKINYKIREHSVGKIPILMICGSKEVQNKTITLRRLGQ 614 Query: 424 GIREDMSLEEVINYAS 439 ++ SLE++I+ S Sbjct: 615 EDQQTESLEKIISSLS 630 >gi|258404181|ref|YP_003196923.1| threonyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] gi|257796408|gb|ACV67345.1| threonyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] Length = 649 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 87/392 (22%), Positives = 153/392 (39%), Gaps = 51/392 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+E R G + PTL +LW SG YD+Y +E + Sbjct: 261 GMPLWHPKGALIRTILEDFSRKEHLRRGYQLVQGPTLLRQELWQRSGHYDNY-RENMYFT 319 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +D+A P + I+ + I+SYR+LP ++++ R E G++R R+F Sbjct: 320 EIDDQAYGIKPMNCLAHMLIYNTKIRSYRDLPIRYFELGTVHRHEKSGVLHGLLRVRQFT 379 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ P+ + +K+ V +++ LGL ++ V T Sbjct: 380 QDDAHIL-CRPDQLQDEISKI-VRFVQDV--LGL---------------FGFDYEVEIST 420 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + S D D + D++ I A Y D+ KL D+L + Sbjct: 421 RPEKSIGSDDAWDRATDALTKALDELGVEYGICAGDGAFYGPKIDM---KLKDALGRKWQ 477 Query: 277 VSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSH 333 + ++LP + G DG+ H V + +GA+ V+ + Sbjct: 478 CTT----------IQCDFTLPERFDLVYVGQDGQRHRPVMLHRAMLGAIERFLGVLLEHY 527 Query: 334 DGKGIIWPDSVAPFKISLINIK----AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 G W + P + ++NI + Q C D +L G D E++G Sbjct: 528 AGALPTW---LMPEQARVLNITDDHAEYAQQCVD-------QLRAAGIRAEADLRNEKLG 577 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + A + P ++VG + V+ S ++ R Sbjct: 578 YKVREAQMEKIPYVLVVGEQEVATSGANLRLR 609 >gi|313892956|ref|ZP_07826533.1| threonine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] gi|313442309|gb|EFR60724.1| threonine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] Length = 636 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 83/395 (21%), Positives = 157/395 (39%), Gaps = 47/395 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +I + G +LP G + + RE + E+ P + + LW SG + Y Sbjct: 256 VIKEEGPGFPFFLPKGMALRNELENFWREVHHEFDYEEIRTPIILNKQLWETSGHWFHY- 314 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +E + +D+ P + ++++ + SYR+ P + ++ L R EL G+ Sbjct: 315 RENMYTTIIDDEEYAIKPMNCPGGILVYQNEMHSYRDFPLRYAELGLVHRHELSGALHGL 374 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSH 208 R R F DA+ F + P+ + K+ + RI+ + GLK + + + GD Sbjct: 375 FRVRAFTQDDAHVF-MLPDQMQSELMKVIELFDRIYSQFGLKYHVELSTKPDNAMGD--- 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + I A T + + + I + F Y D H E Sbjct: 431 DAIWEAATEALRNAIEAKGIPYVINPGDGAF----------------YGPKLDYHIE--- 471 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 DSL R + G I +LP + G DG+ H + + G+M Sbjct: 472 DSL-------GRTWQCGTI---QLDMNLPERFQIDYVGEDGQKHRPIMIHRACFGSMERF 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP ++ ++ I + H + ++ ++++ +V DD Sbjct: 522 IGILTEHYAGA---FPTWMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEV----DDR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E+IG + A + P ++VG K V + V ++ Sbjct: 575 SEKIGYKIRQAQMAKVPYMLVVGDKEVEEGTVNVR 609 >gi|289450634|ref|YP_003474779.1| proline--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185181|gb|ADC91606.1| proline--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 483 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 3/158 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YFG ++ F + K Y S+G+ + RV+ A+I D G+ Sbjct: 225 GKALQSGTSHYFGDGFARAFGIQFSDRENKLQYCHETSWGM-STRVIGAMIMVHSDDSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV--GCDVFWDDMGEQIGSQFAVAD 396 + P VAP +I LI I H A + RL K G V D + G +F+ + Sbjct: 284 VLPPRVAPVQIMLIPIAMHKDGVLPAVFALRDRLQKASYGFRVKVDASDKMPGWKFSEQE 343 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G PL++ +G + + V R TG + + LE + Sbjct: 344 MRGIPLRLEMGPRDIEQGSVVAVRRDTGAKTILPLEGI 381 >gi|283785057|ref|YP_003364922.1| threonyl-tRNA synthetase [Citrobacter rodentium ICC168] gi|282948511|emb|CBG88100.1| threonyl-tRNA synthetase [Citrobacter rodentium ICC168] Length = 642 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 86/411 (20%), Positives = 153/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R + + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNEVI 625 >gi|259046393|ref|ZP_05736794.1| proline--tRNA ligase [Granulicatella adiacens ATCC 49175] gi|259036938|gb|EEW38193.1| proline--tRNA ligase [Granulicatella adiacens ATCC 49175] Length = 482 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 3/145 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GTK++ + + + Y S+G+ + R++ ++I + D KG+ Sbjct: 219 GKAVQAGTSHYMGTKFAEAFDIKYLTKENEHVYAHTTSWGV-STRLIGSLIMTHGDEKGL 277 Query: 339 IWPDSVAPFKISLINIK--AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P VAP ++ LI + + + E++ L G V DD G +F + Sbjct: 278 VLPPKVAPTQVVLIPVGPWKKNPAILEKLEELQKELKAAGLRVKIDDTDNSPGFKFNEWE 337 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L G P+++ G + + +++V K R Sbjct: 338 LRGVPMRIECGPRDLENNQVMTKMR 362 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 3/88 (3%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ F + I SYR+LP+ Q FR E + +R+ EFL ++ ++ Sbjct: 108 PTSETMIGTAFSNWINSYRDLPYEINQWANVFRWE-KKTLPFLRTSEFLWQEGHTAHADE 166 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 E ++ KM Y + G+ ++P+ Sbjct: 167 EDARRRTMKMLEVYKEVVE--GVLAVPV 192 >gi|328855773|gb|EGG04898.1| hypothetical protein MELLADRAFT_37217 [Melampsora larici-populina 98AG31] Length = 687 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 2/135 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G WLP G + + + ++ E + G E+ P + ++ LW SG +++Y + Sbjct: 297 HEMSPGSCFWLPHGTRIYNTLVEFLKSEYRKRGYDEVISPNMYNSKLWNTSGHWENYSEN 356 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +L + + P + IF S +SYR LP + R+E G+ R Sbjct: 357 MFKL-EIEKETFALKPMNCPGHCLIFGSKDRSYRELPLRMADFGVVHRNEASGALSGLTR 415 Query: 152 SREFLMKDAYSFDLT 166 R F DA+ F T Sbjct: 416 VRRFCQDDAHHFCTT 430 >gi|167044004|gb|ABZ08690.1| putative anticodon binding domain protein [uncultured marine crenarchaeote HF4000_APKG3K8] Length = 479 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 65/319 (20%), Positives = 122/319 (38%), Gaps = 66/319 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E + +F IKS+R+LP R E++ +R+ EFL ++ + T Sbjct: 111 PTSETLAYSLFSKWIKSWRDLPLKMNFWNSALRAEIKGTKPFLRTSEFLWQEGH----TV 166 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 +K K L ++ + + E V TG+ Sbjct: 167 HATKDEAEKEVADILELYKKT-----------------IEEELAVPVITGKK-------- 201 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 SE F V+ + L +P+ K +++G Sbjct: 202 ------SEKDKF-------------------VGAVYTDTLESLMPDGK-----ALQMGTS 231 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + G +S P + + + + S+G+ + R++ +I + D KG++ P VAP Sbjct: 232 HFLGQNFSKPFDVKYLDENNVEAFAWQTSWGV-SWRLIGGMIMTHGDDKGLVLPPKVAPI 290 Query: 348 KISLINI----KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVADLLGFPL 402 ++ +I I + V + AC+ I LS V DD G +F ++ G P+ Sbjct: 291 QVVIIPIYYSNDEKENVLQTACQ-IKDSLSNNDIRVHLDDREHLTPGFKFNDWEMKGIPI 349 Query: 403 QVIVGSKFVSDSKVEIKHR 421 ++ +G K ++ ++V + R Sbjct: 350 RIEIGPKDIAKNQVVLVRR 368 >gi|172036410|ref|YP_001802911.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|171697864|gb|ACB50845.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] Length = 666 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 86/397 (21%), Positives = 145/397 (36%), Gaps = 53/397 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R G + P + + DLW SG +D Y + M Sbjct: 289 GLVFWHPRGAMMRYLIEDYWRNAHLEDGYQFLYTPHVANLDLWKTSGHWDFYRENMFEAM 348 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + P + ++ + SYR P + ++ +R E G+MR R F Sbjct: 349 AVEHQTYQIKPMNCPFHVLTYKDDLHSYREFPLKWAELGTVYRYEKSGVLHGLMRVRGFT 408 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F L PE + +I G + + P Sbjct: 409 QDDAHIFCL-PEQIADEILGVLNLTEKILSDFGFTDYEVNLSTRP-----------EKSV 456 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT--------APYAATSDVHNEKLF 268 G QV+ + +E I +LN+ +QW A Y D+ K+ Sbjct: 457 GSDQVW--------QLATEAL----IKALNN--KQWNYLEDRGGGAFYGPKIDI---KIK 499 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 D++ + S ++ FG +Y ADG M I G++ Sbjct: 500 DAIGRLWQCSTIQVDFNLPERFGMEYV--------AADGSRQQPIMIHRAIFGSLERFFG 551 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ ++ G +W +AP ++ L+ + Q D + + RL K G V D GE+ Sbjct: 552 ILIENYAGDFPLW---LAPIQLRLLPVSDEQQ---DYAKTVAIRLKKAGYRVEVDTSGER 605 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +G Q +++L P+ IVG + V + I+ R G Sbjct: 606 LGKQIRLSELEKIPVVAIVGKREVESQTLSIRTRQGG 642 >gi|94676542|ref|YP_588910.1| threonyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123081480|sp|Q1LT04|SYT_BAUCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|94219692|gb|ABF13851.1| threonyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 642 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 95/430 (22%), Positives = 156/430 (36%), Gaps = 61/430 (14%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L LQE RD +L L I + + G+ W G + IR + Sbjct: 230 KCYLQSLQEVKKRDHRKIGQQLDLYH--IQEEAPGMVFWHVDGWIIFRELETFIRSKLQT 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW ++G + +Y + + + N + I P + IF I Sbjct: 288 YKYQEVKSPVMIDRTLWEQTGHWSNYAEHIFTTSSENREYCI-KPMNCPGHVQIFNQQIN 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + +R+E G+MR R F DA+ F T E N Sbjct: 347 SYRDLPLRMAEFGSCYRNEPSGSLHGLMRVRNFTQDDAHIF-CTEEQVCDEINNNIKMLY 405 Query: 183 RIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++H G K I + + P IG D + D E D Sbjct: 406 EVYHTFGFKKILVNLSTRPAHRIGND------KIWDKAE------------------QDL 441 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNE-KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 ++ N I+ ++ A E L DS R + G I +SLP Sbjct: 442 ATTLTNNGILFKYNVGAGAFYGPKIEFTLLDSFD-------RAWQCGTI---QLDFSLP- 490 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII-------WPDSVAPFKISL 351 + K Y+ + + + + A++ S GI+ +P +AP ++ L Sbjct: 491 ------SRLKAFYINKNNQRLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPTQVVL 544 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 +NI + + ++ +LS D E+IG + L P +I G + + Sbjct: 545 MNISDNQS---NYVIQLMQKLSTANIRAKIDLRNEKIGFKIREHTLRRVPYMLICGDQEI 601 Query: 412 SDSKVEIKHR 421 KV I+ R Sbjct: 602 KMGKVTIRTR 611 >gi|301310685|ref|ZP_07216624.1| threonine--tRNA ligase [Bacteroides sp. 20_3] gi|300832259|gb|EFK62890.1| threonine--tRNA ligase [Bacteroides sp. 20_3] Length = 649 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 88/413 (21%), Positives = 152/413 (36%), Gaps = 63/413 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + +R Q R E+ P + + L++ SG Y YGK+ + Sbjct: 261 KGLPMWLPKGTALRLRLQEFLRRIQARYNYQEVMCPPIGNKLLYITSGHYAKYGKDSFQP 320 Query: 97 ADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ Y P + I+++ +SY++LP + R E G+ R R Sbjct: 321 IHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F P+ K + + +F + ++ + I L Sbjct: 381 SFTQDDAHIF-CRPDQVKQEFLNVMDIISIVFKTMNFENFEAQ--------------ISL 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A + EK + E Sbjct: 426 RDKVNREKYIGSD-----------------------ENWEKAEQAIVEACEEKGLKAKIE 462 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y+LP + GAD + H V + Sbjct: 463 YGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPF 522 Query: 320 GAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G+M R VA +IE + GK +W + P ++ ++ I + D +I L Sbjct: 523 GSMERFVAVLIEHTA-GKFPLW---LTPEQVCIMPI---SEKFNDYAWQIARELGNQEIR 575 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 DD E+IG + +L P +IVG K + +V ++ + G + M + Sbjct: 576 AIVDDRNEKIGRKIRDNELKRIPYMLIVGEKEAENGEVSVRKQGEGDKGSMKI 628 >gi|225573951|ref|ZP_03782596.1| hypothetical protein RUMHYD_02045 [Blautia hydrogenotrophica DSM 10507] gi|225038789|gb|EEG49035.1| hypothetical protein RUMHYD_02045 [Blautia hydrogenotrophica DSM 10507] Length = 479 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 70/329 (21%), Positives = 126/329 (38%), Gaps = 65/329 (19%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + D + I S+R+LP + Q +++ RP +RSREFL ++ ++ Sbjct: 114 PTSETLFCDFYARDIHSHRDLPKVYNQWCSVVRWEKTTRP---FLRSREFLWQEGHTAHA 170 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 T E ++ +M Y AD FC + Sbjct: 171 TAEEAEERTIQMLNVY--------------------------------AD------FCEE 192 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 + I TD + A Y S +H+ K S G Sbjct: 193 ELAIPVIKGRKTDKEKFAGAE-------ATYTIESLMHDGKALQS--------------G 231 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 FG ++ + D YV S+G+ R++ A+I D G++ P +A Sbjct: 232 TSHNFGDGFAKAFGIQYADRDNTLKYVHQTSWGM-TTRMIGAIIMVHGDNSGLVLPPRIA 290 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P + +I I+ + + +++ A + K G V DD + G +F+ ++ G P+++ Sbjct: 291 PVQAMIIPIQQKKEGVLEKADEMMAAIKKAGIRVKVDDSDKSPGWKFSEQEMRGIPVRIE 350 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G K + + + I R T + +S E++ Sbjct: 351 CGPKDIENGQAVIVRRDTREKIVVSFEDL 379 >gi|325957298|ref|YP_004292710.1| threonyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|325333863|gb|ADZ07771.1| threonyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|327184028|gb|AEA32475.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118] Length = 644 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 86/405 (21%), Positives = 160/405 (39%), Gaps = 39/405 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I + + G + P L + D + SG + Y +M Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWAHYRDDMFPPM 319 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR+LP ++ + R E G+ R RE Sbjct: 320 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 380 TLNDGHTF-VALDQVQDEFAKILKLIMDVYKDFDITDYYFR---------LSYR-----D 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + + D M D + L+ + E A Y D+ + +L + Sbjct: 425 PKNTEKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 481 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 482 ETMSTIQLD----FMLPERFGL----TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 533 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N AH + EK+ L+K G D+ E++G + Sbjct: 534 KGAFPTW---LAPIQAEIIPVNNDAHGEY----AEKVRQELAKRGFRAEVDNRNEKMGYK 586 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P +++G + + + V ++ T SL++ I Sbjct: 587 IRESQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLDDFIK 631 >gi|326201674|ref|ZP_08191545.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325988274|gb|EGD49099.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 635 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 3/132 (2%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G ++P G + + R E + G E+ P + + +LW+ SG +D+Y KE + Sbjct: 261 GFPFFMPKGMVLRNLLEDFWRSEHKKAGYQEIKTPVILNKELWLRSGHWDTY-KENMYTV 319 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D +++ P + +F+ + SYR+LP ++ L R EL G+MR R F Sbjct: 320 DIDEQEYAIKPMNCPGGILVFKRKLHSYRDLPQRMGELGLVHRHELSGALHGLMRVRCFT 379 Query: 157 MKDAYSFDLTPE 168 DA+ F +TPE Sbjct: 380 QDDAHIF-MTPE 390 >gi|114570943|ref|YP_757623.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Maricaulis maris MCS10] gi|122315357|sp|Q0AM08|SYT_MARMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114341405|gb|ABI66685.1| Ser-tRNA(Thr) hydrolase [Maricaulis maris MCS10] Length = 644 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 5/152 (3%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL + + H + ++G W P G + V + +R G +E+ P Sbjct: 238 EAEKRDHRKLGKQMELFHFQEEAQGQVFWHPNGWRLYRTVTSYMRRRLEAAGYVEIRTPQ 297 Query: 74 LQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 L W SG +D Y + M + D+ +K + P + +F KSYR+LP Sbjct: 298 LMDRKFWEASGHWDKYRENMFISSIDQEEKVLAVKPMNCPCHVQVFNQGQKSYRDLPLRM 357 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + R E G+MR R F+ DA+ F Sbjct: 358 AEFGSCHRYEPSGSLHGLMRVRGFVQDDAHIF 389 >gi|94264275|ref|ZP_01288069.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] gi|94270245|ref|ZP_01291687.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] gi|93450880|gb|EAT01895.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] gi|93455320|gb|EAT05527.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] Length = 641 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 86/420 (20%), Positives = 152/420 (36%), Gaps = 39/420 (9%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD +L L T + Q G+ W P G + R++ + Sbjct: 231 KQYLAQLEEAKRRDHRKLGKELELFT-IQEQIGPGLILWQPKGALLRRLIEDYWRQQHYQ 289 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + +LW SG D YG M D D P + ++++ + Sbjct: 290 HGYDLLYTPHIARRELWQTSGHLDFYGDNMFAGMDIEDVQYQLKPMNCPFHIALYKTRKR 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR P + ++ +R E G+MR R F DA+ F PE + ++ L Sbjct: 350 SYREFPLRWCELGTVYRFEKTGALHGLMRVRGFTQDDAHIF-CRPEQLEDEIYRILDFNL 408 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G + + P S E A K P E + Sbjct: 409 HVLKAFGFSDYEIYLSTRPEKYVGSDEHWQQATEALKLALEHKGLAYSVDPGEGVFYGPK 468 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + K+ D L + S ++ F ++ L + Sbjct: 469 IDI--------------------KIKDVLGRAWQCSTIQVD----FNLPERFKL----GY 500 Query: 303 KGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D +H + + +G++ V+ + G +W +AP + ++NI Sbjct: 501 TGEDSGEHRPIMIHRALMGSLERFFGVLIEHYAGAFPLW---LAPVQARILNIT---DAQ 554 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D K+Y +L + G V D+ E++ + A L P ++VG + +D + ++ R Sbjct: 555 LDYVGKVYEQLRRAGVRVEKDERNEKLNYKIREAQLQKIPYMLVVGDQEAADGTITVRQR 614 >gi|308186646|ref|YP_003930777.1| Threonyl-tRNA synthetase [Pantoea vagans C9-1] gi|308057156|gb|ADO09328.1| Threonyl-tRNA synthetase [Pantoea vagans C9-1] Length = 642 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 84/400 (21%), Positives = 148/400 (37%), Gaps = 54/400 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHVF-CTEEQVRDEVNSCIRMVYDMYSTFGFEKIVVKLSTRPEKRIGTD-- 431 Query: 208 HEFIVLADTGETQVFCS--KDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 + D E + + ++ ++F P E + I Sbjct: 432 ----EMWDRAEEDLAAALNENNIEFEFQPGEGAFYGPKIEFT------------------ 469 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 L+D L R + G + +SLP + AT+ G + M I G+ Sbjct: 470 --LYDCLD-------RAWQCGTV---QLDFSLPKRLEATYVGENNDRQTPVMIHRAILGS 517 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 M ++ G +P +AP ++ ++NI + E + +L G V Sbjct: 518 MERFIGILTEEFAG---FFPTWLAPLQVVVMNITDGQA---EYVESLTRKLQNAGIRVKA 571 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + L P ++ G K V KV ++ R Sbjct: 572 DLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTR 611 >gi|297617667|ref|YP_003702826.1| threonyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297145504|gb|ADI02261.1| threonyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 636 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 90/402 (22%), Positives = 154/402 (38%), Gaps = 41/402 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM-LRL 96 G +LP G + + R+E + G E+ P + + LW +SG ++ Y + M Sbjct: 261 GFPFFLPKGMIIRNELENFWRQEHVKAGYQEIKTPIILNRSLWEKSGHWEHYRENMYFTT 320 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D A+ P + +++ ++ SYR LP ++ L R E G+MR R F Sbjct: 321 IDEEDYAV--KPMNCPGGILVYKQNLHSYRELPIRLGELGLVHRHEKSGVLHGLMRVRAF 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 DA+ F L + ++ K + + F+RL S + + P S E A Sbjct: 379 TQDDAHIFMLPSQITQEI--KGVIDMVDHFYRLFGFSYHVELSTKPEKAMGSDEIWEKA- 435 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 TG + + M++ I + F Y D H L DSL Sbjct: 436 TGALRQALEEKGMEYKINEGDGAF----------------YGPKIDFH---LRDSLDRTW 476 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHD 334 + ++ F K+ L T+ G DG+ H M I G++ ++ Sbjct: 477 QCGTIQLD----FLMPEKFDL----TYVGEDGEKHRPVMIHRVIYGSLERFIGILTEHFG 528 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 G +P +AP ++ +I I ++ A + G V D E++G + Sbjct: 529 GA---FPTWLAPVQVRIIPITERHH---GYAVELEAGFREAGLRVESDLRSEKVGYKIRE 582 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L P ++VG K + V ++ R G + E +N Sbjct: 583 GQLQRIPYLLVVGDKETENKTVSVRKRKEGDLGAQPVAEFLN 624 >gi|229826593|ref|ZP_04452662.1| hypothetical protein GCWU000182_01968 [Abiotrophia defectiva ATCC 49176] gi|229789463|gb|EEP25577.1| hypothetical protein GCWU000182_01968 [Abiotrophia defectiva ATCC 49176] Length = 507 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ TF D Y S+G+ + R++ A+I D G+ Sbjct: 254 GKALQSGTSHNFGDGFARAYDVTFTDKDNSIQYAHQTSWGV-STRMIGAIIMVHGDDNGL 312 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ +I I + + + ++ RLS V DD + G +FA ++ Sbjct: 313 VLPPRIAPTQVMIIPIMQNKEGVLEKANELKNRLS-ADFRVKLDDSDKTPGFKFADQEMR 371 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P++V +G K + +K + R + ++SL+E+ Sbjct: 372 GIPVRVEIGPKDIEANKCIVVRRDNREKTEVSLDEL 407 Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 5/81 (6%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + D + I+SYR+LP + Q +++ E RP +R+REFL ++ ++ Sbjct: 143 PTSETLFCDFYSKDIRSYRDLPKVYNQWCSVVRWEKETRP---FLRTREFLWQEGHTAHA 199 Query: 166 TPEGSKHSYNKMFVSYLRIFH 186 T E ++ +M Y+ F Sbjct: 200 TEEEAQARTIQMLNVYVDFFE 220 >gi|123965897|ref|YP_001010978.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] gi|166225479|sp|A2BVR0|SYT_PROM5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123200263|gb|ABM71871.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] Length = 638 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 83/382 (21%), Positives = 142/382 (37%), Gaps = 42/382 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + S G+ W P G + IRE + +E+ P LW +SG ++ + Sbjct: 255 IQEESPGMIFWHPNGWIIYQILEKYIREILRKNEYLEIKTPQAVDKSLWEKSGHWEKFRD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +M A N I P + +F +KSY++LP + R+E G+M Sbjct: 315 DMFTTASENRTYAI-KPMNCPCHIQVFNQGLKSYKDLPLRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + + +++ G I ++ + P S + Sbjct: 374 RVRNFTQDDAHIF-CTEEQIQEEVSTFIDLVFEVYNTFGFDEIIIKLSTRPEKRVGSEDI 432 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++ T+ +K+ P E + I + L D Sbjct: 433 WDKSEEALTEALNNKNLKWELQPGEGAFYGPKIEFS--------------------LKDC 472 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 L N+ I+V +S+P + ATF + K V + +G+ Sbjct: 473 L--NRIWQCGTIQVD--------FSMPVRLDATFVDINNEKKSPVMLHRAILGSFERFIG 522 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ ++ K IW +AP +I L++I + C + L+ G D E+ Sbjct: 523 ILIEQYEAKFPIW---LAPTQIILLSITERNI---KKCIEFNNLLNTKGYRSKIDIRNEK 576 Query: 388 IGSQFAVADLLGFPLQVIVGSK 409 IG + + L PL IVG K Sbjct: 577 IGYKIRESTLARIPLIGIVGDK 598 >gi|71083144|ref|YP_265863.1| threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062] gi|123734387|sp|Q4FNH9|SYT_PELUB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71062257|gb|AAZ21260.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062] Length = 638 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 4/151 (2%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL + H + S G W G K + A +R Q + G E++ P Sbjct: 238 EAEKRDHRKLGKEMDLFHFREESPGSVFWHEKGWKLFQKLVAYMRARQEKAGYKEVNTPE 297 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG ++ YG+ M ++K P + +F +KSYR+LP Sbjct: 298 ILDRSLWEKSGHWEKYGEHMYTSQTPDEKIFAIKPMNCPGHVQVFNQGLKSYRDLPLRIS 357 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + R E G++R R F DA+ F Sbjct: 358 EFGKVHRYEPSGALHGLLRVRAFTQDDAHIF 388 >gi|83719712|ref|YP_443111.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264] gi|167620276|ref|ZP_02388907.1| threonyl-tRNA synthetase [Burkholderia thailandensis Bt4] gi|123767616|sp|Q2SVD8|SYT_BURTA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|83653537|gb|ABC37600.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264] Length = 635 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 150/396 (37%), Gaps = 46/396 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G+ W P G V +R + G +E+ P + LW SG + +Y + Sbjct: 255 IQEEAPGMVFWHPKGWTLWQRVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKH--SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ DA+ F + + ++NK+ +S ++ G I ++ P Sbjct: 371 GLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMS---VYEDFGFDRIDIKLSLRPEQRM 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 S E A+ G + +P E A Y + H Sbjct: 428 GSDETWDHAEEGLRNALKACGLEWEELPGEG-----------------AFYGPKIEYH-- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 + D+L + + +++ G +Y + + V + +G+M Sbjct: 469 -IKDALGRSWQCGTLQLDMMLPERLGAEY-------VAEDNSRRRPVMLHRAIVGSMERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ H G W +APF ++NI A Q + + + L K G V D Sbjct: 521 LGILIEHHAGAMPAW---LAPFHAVVLNI-AESQA--EYAQTVVQSLQKQGLRVSADLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I + L P ++VG K V ++ R Sbjct: 575 EKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRAR 610 >gi|257092825|ref|YP_003166466.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045349|gb|ACV34537.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 638 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 71/181 (39%), Gaps = 16/181 (8%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H+KG W V +R G E+ P + LW SG + +Y Sbjct: 261 GMVFWHAKGWTIW--------QEVEQYMRRLLGENGYCEVKTPMIMDRTLWERSGHWQNY 312 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M A N I P + IF ++SYR+LP + R+E G Sbjct: 313 AEHMFTTASENRDYAI-KPMNCPGHIQIFNQGLRSYRDLPLRLAEFGSCHRNEPSGALHG 371 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGG 204 +MR R F+ DA+ F E F+ L +I+ G I ++ + P IG Sbjct: 372 IMRVRAFVQDDAHIF--CTEAQVLPETAAFIDLLEKIYADFGFTDILVKLSTRPDKRIGS 429 Query: 205 D 205 D Sbjct: 430 D 430 Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 12/158 (7%) Query: 284 VGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKG 337 +G ++ GT ++LP + A + G D H M I G++ ++ + G Sbjct: 473 LGRVWQCGTLQLDFALPERLDAHYVGEDNDRHVPVMLHRAILGSLERFIGILIEHYAGAM 532 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 +W ++P ++ ++NI D E++ A L + G D E+I + L Sbjct: 533 PLW---LSPMQVVVLNISEKQG---DYAEQVAATLRRAGLRAEADLRNEKITRKIREHSL 586 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 P QV+VG K V+ + V ++ R MSLE +I Sbjct: 587 NKLPYQVVVGDKEVAANLVAVRTRGGQDLGQMSLESLI 624 >gi|114047517|ref|YP_738067.1| threonyl-tRNA synthetase [Shewanella sp. MR-7] gi|123326545|sp|Q0HV45|SYT_SHESR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|113888959|gb|ABI43010.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella sp. MR-7] Length = 642 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 81/397 (20%), Positives = 148/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR + N+ E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + + P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAV-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + + G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQVQAEVSSCIQMVYDTYSTFGFENIVVKLSTRPEKRIGDDAM 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ Q +K+ +P E + I L Sbjct: 434 WD---RAEEALKQALRAKNIEFTILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G+ +P +AP ++ ++NI D E++ + G +D Sbjct: 521 FLGILIEEYAGR---FPTWLAPMQVVVMNITDKQA---DYVEEVVKFFKEQGIRASFDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|269115191|ref|YP_003302954.1| Prolyl-tRNA synthetase [Mycoplasma hominis] gi|268322816|emb|CAX37551.1| Prolyl-tRNA synthetase [Mycoplasma hominis ATCC 23114] Length = 477 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 84/421 (19%), Positives = 163/421 (38%), Gaps = 79/421 (18%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSY 89 M + +KG + PL +N+ A + E + G + +P L + L E + + Sbjct: 28 MAYGATKGCIIFKPLAYSIWENIQAKMDIEFKKRGVQNVYLPLLIPESLLQKEKNHVEGF 87 Query: 90 GKEMLRLADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI--QLKFRDEL 143 E+ + + K + PT E + D+F++ + SY +LP + Q L++ Sbjct: 88 NPELATVTEVGGKKLAEKFFIRPTSETLFADLFKNEVSSYNDLPIIYNQWVNVLRWEKTT 147 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPI- 202 P +R+REFL ++ ++ HS ++ + + + H++ K + + P+ Sbjct: 148 NP---FLRTREFLWQEGHTI--------HSSSEEAIEFAKTMHKV-YKDVIEENLAIPVV 195 Query: 203 -GGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD 261 G HE AD T KD Sbjct: 196 EGCKTDHEKFAGADITYTLESMMKD----------------------------------- 220 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGA 321 + ++ G Y G ++ TFK + K S+G Sbjct: 221 -----------------GKALQSGTSHYLGQNFTKAFDITFKNNENKLINPYGTSWGT-T 262 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSK-VGCD 378 R++ A+I + D +GII P +A ++ ++ I ++V + A E A L+K + + Sbjct: 263 TRLIGALIMTHGDDRGIIIPPKIARTQVDILEIFNSKDERVHKLALELKDALLAKNIVAN 322 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 + D + G + A +++ G PL++ +G K + ++ V R + ++ E N A Sbjct: 323 I--DSSNKGPGFKAANSEIHGTPLRIEIGPKDIENNSVLFVRRDNLEKITSTIAEAANIA 380 Query: 439 S 439 S Sbjct: 381 S 381 >gi|312137261|ref|YP_004004598.1| prolyl-tRNA synthetase [Methanothermus fervidus DSM 2088] gi|311224980|gb|ADP77836.1| prolyl-tRNA synthetase [Methanothermus fervidus DSM 2088] Length = 466 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 7/168 (4%) Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 FD+L + R +++G I G +S TF+ +GK + YG+ RV+A+ Sbjct: 205 FDTLMPD----GRTLQIGTIHNLGQNFSKTFDITFETEEGKHEHAYQTCYGVSD-RVIAS 259 Query: 328 VIESSHDGKGIIWPDSVAPFKISLIN--IKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 VI D KG+ P +AP +I ++ K ++ + C+ + +L + V DD Sbjct: 260 VISIHGDEKGLCLPPKIAPIQIVIVPIIFKETEEEVLEFCKNVEKKLKEGKLKVHLDDRD 319 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +F ++ G PL++ +G K + +KV + R +G + D+ ++ Sbjct: 320 IRAGRKFYEWEMKGIPLRIEIGPKDIEKNKVVVVRRDSGEKMDVKFDD 367 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 15/164 (9%) Query: 37 KGIYSWLPLG----QKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGK 91 KG+++WLP G +K ++ + ++ E+ + E+ P L +L ES + Sbjct: 25 KGMHAWLPYGFKIRKKIIETLRKLLDEDHD-----EVLFPLLIPEEELMKESIHIKGFED 79 Query: 92 EMLRLAD----RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 E+ + + + + PT E M +F I+++++LP YQI FR E + Sbjct: 80 EVYWVTHGGKAKLKRKLALRPTSETAMYPMFSLWIRTHKDLPLKVYQIVNTFRYETKHTR 139 Query: 148 GVMRSREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 ++R RE K+A++ T EG++ K Y F LG+ Sbjct: 140 PLIRIREITTFKEAHTVHKTLEGAEKQVKKAINIYKTFFDSLGI 183 >gi|83816191|ref|YP_446893.1| threonyl-tRNA synthetase [Salinibacter ruber DSM 13855] gi|83757585|gb|ABC45698.1| threonyl-tRNA synthetase [Salinibacter ruber DSM 13855] Length = 694 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 91/450 (20%), Positives = 161/450 (35%), Gaps = 67/450 (14%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD +L L T Q G+ WLP G + ++++EQ + G + P + Sbjct: 286 RDHRKLGTELNLFTFDTEQVGPGLPMWLPKGTTLRQTLQEVLQQEQVKQGYKPVCTPHIG 345 Query: 76 SADLWVESGRYDSYGKE----MLRLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLP 129 DL+ SG Y Y + M+ + + Y P + I+++ SYR+LP Sbjct: 346 RLDLYRTSGHYPHYEDDQFPPMVTGEGDDGEEDGYLLKPMNCPHHVKIYQNDHHSYRDLP 405 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + +R E G+ R R F DA+ F TP K + + L++ L Sbjct: 406 VRLAEFGTVYRQEQTGELGGLTRVRGFTQDDAHIF-CTPAQVKDEFKSVIDLTLKVLDAL 464 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G + + I L D +T+ + +D + Sbjct: 465 GFEEFEAQ--------------ISLRDPDDTEKYTGRDAL-------------------- 490 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT---KYSLP 297 WT + E D+ E + G + +G + GT Y+LP Sbjct: 491 ---WTRAEQDIREAVAETDLDAYEEPGEAAFYGPKLDFMVEDALGRAWQLGTIQVDYNLP 547 Query: 298 MSATFKGADGKDHY---VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 D D V + G++ R + +IE G +P +AP ++ +I Sbjct: 548 ERFELTYVDEHDERKRPVMIHRAPFGSLERFIGVLIEHC----GGNFPTWLAPTQVQIIP 603 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 + D V D +++ A L V D E +G + A+ P ++VG Sbjct: 604 V-GDDFV--DYAQEVAATLRAEDVRVEIDTSDETVGYKIREAETQKVPYMLVVGGDEEEA 660 Query: 414 SKVEIKHRLTGIREDMSLEEVINYASHRFS 443 V ++ G + +S+++ ++ F Sbjct: 661 GTVSVRSHADGPQGTVSVQDFLDRTGPEFE 690 >gi|86131542|ref|ZP_01050140.1| Threonyl-tRNA synthetase [Dokdonia donghaensis MED134] gi|85817987|gb|EAQ39155.1| Threonyl-tRNA synthetase [Dokdonia donghaensis MED134] Length = 647 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 86/424 (20%), Positives = 163/424 (38%), Gaps = 45/424 (10%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD +L L T + +G+ WLP G + + ++ Q + Sbjct: 229 KQYLELLEEAKKRDHRKLGKELELFT-FSQRVGQGLPLWLPKGAALRERLENFLKAAQKK 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA--MIYGPTHEEVMTDIFRSH 121 G + P + +L+ SG Y YG + + ++ + P + +I+ S Sbjct: 288 QGYEMVVSPHIGQKELYETSGHYAKYGADSFQPIQTPNEGEEFLLKPMNCPHHCEIYNSR 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY+ LP F + +R E G+ R R F DA+ F TP+ + K+ Sbjct: 348 PWSYKELPKRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CTPDQLDEEFMKVIDL 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 L +F LG + + + L D + +D + + +EN + Sbjct: 407 VLYVFGSLGFEDFTAQ--------------VSLRDPENPDKYIGED--ENWVKAENAILN 450 Query: 241 DIIS--LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP- 297 + LN +VE A + D + K R ++G I Y+LP Sbjct: 451 AAKAKGLNYVVETGEAAFYGPK-------LDFMV--KDALGRSWQLGTI---QVDYNLPE 498 Query: 298 -MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 +KG+D + H V + G+M A++ G +W + P + +++ + Sbjct: 499 RFELQYKGSDNEMHRPVMIHRAPFGSMERFVAILLEHTGGNFPLW---LMPQQATILTL- 554 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + + + L D+ GE +G + A++ P +I+G + D Sbjct: 555 --SEKYEKYAQNVLNLLENHEIRALIDNRGETMGKKIREAEMQKLPFMLIIGEQEEKDGT 612 Query: 416 VEIK 419 + ++ Sbjct: 613 ISVR 616 >gi|319954103|ref|YP_004165370.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Cellulophaga algicola DSM 14237] gi|319422763|gb|ADV49872.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Cellulophaga algicola DSM 14237] Length = 646 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 77/402 (19%), Positives = 149/402 (37%), Gaps = 65/402 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 +G+ WLP G + + +++ Q + G + P + +L+V SG Y YG + + Sbjct: 261 QGLPLWLPKGAALRERLEDFLKKAQKKAGYEMVITPHIGQKELYVTSGHYAKYGADSFQP 320 Query: 96 -LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + D+ + P + +++ SY++LP F + +R E G+ R R Sbjct: 321 IKTPKMDEEFLLKPMNCPHHCEVYNFKPHSYKDLPKRFAEFGTVYRYEQSGELHGLTRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TP+ + + L + LG + + + + Sbjct: 381 GFTQDDAHIF-CTPDQLDEEFKNVIDLSLYVLGSLGFDNFTAQ--------------VSV 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + VE W +A + EK + + E Sbjct: 426 RDLTKPEKYIGS-----------------------VENWEKAESAIINAATEKGLNFVIE 462 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + + G + +G + GT Y+LP T+KG+D + H V + Sbjct: 463 SGEAAFYGPKLDFMVKDALGRQWQLGTIQVDYNLPERFDLTYKGSDNELHRPVMIHRAPF 522 Query: 320 GAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+M A++ G +W P+ +S + H++ EK+ L K Sbjct: 523 GSMERFIALLLEHTGGNFPLWLIPEQAIILPVS----EKHEKY----AEKVLKSLEKHEI 574 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E +G + A++ P +IVG ++ + ++ Sbjct: 575 RALVDKRNETVGKKIREAEMNKLPFMLIVGENEEAEETISVR 616 >gi|295397484|ref|ZP_06807567.1| threonine--tRNA ligase [Aerococcus viridans ATCC 11563] gi|294974284|gb|EFG50028.1| threonine--tRNA ligase [Aerococcus viridans ATCC 11563] Length = 656 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 89/402 (22%), Positives = 167/402 (41%), Gaps = 44/402 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 274 GLPFWLPKGATIRRIIERYIIDKEVSLGYEHVYTPIMADVELYKTSGHWDHYHEDMFPPM 333 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D + ++ P + ++++ I SYR P ++ + R E G+ R RE Sbjct: 334 DMGDGEQLVLRPMNCPHHMMVYKNDIHSYREFPVRIAELGMMHRYEKSGALSGLQRVREM 393 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F + P+ K + ++ +++ + R LS+ D Sbjct: 394 TLNDAHIF-VRPDQIKEEFTRVIELIKQVYDDFNITDYRFR---------LSYR-----D 438 Query: 216 TGETQVFCSKDFM---DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 T + D M + E D + +I E A Y DV ++ +L Sbjct: 439 PNNTDKYFDDDEMWEKAQAMLKEAMDDLGLEYFEAIGE--AAFYGPKLDV---QMKTALG 493 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAM-RVVAAVI 329 + +S ++ F ++ L T+ G DG+D + V + + M R VA +I Sbjct: 494 NEETMSTVQLD----FLLPERFDL----TYVGQDGQDTHRPVVIHRGVVSTMERFVAYLI 545 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 E KG +P +AP + LI + +D+ + E+I R+ G V D+ E++G Sbjct: 546 EEY---KG-AFPTWLAPVQAKLIPV--NDEAHGEHVEEIRRRMKAAGMRVEVDNRNEKMG 599 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 + A P Q++ G ++++ V + R G +E +S+ Sbjct: 600 YKIREAQTQKIPYQLVFGDNEIAENTVTV--RRYGSKETLSM 639 >gi|254498720|ref|ZP_05111436.1| threonyl tRNA synthase [Legionella drancourtii LLAP12] gi|254352048|gb|EET10867.1| threonyl tRNA synthase [Legionella drancourtii LLAP12] Length = 648 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 81/396 (20%), Positives = 144/396 (36%), Gaps = 54/396 (13%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G + +R G E+ P L LW +SG + ++ EM Sbjct: 268 APGMVFWHPKGWTIYQELERYMRARLADFGYQEIKTPQLVDKVLWEKSGHWANFRDEMF- 326 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + +++ P + ++ +KSYR+LP F + R E G+MR R Sbjct: 327 VTETDNRHYAVKPMNCPCHIQVYNQGLKSYRDLPLRFSEFGNCHRCEPSGSLHGLMRVRN 386 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFI 211 + DA+ F T + + + M ++ G I R P +GGD + Sbjct: 387 MVQDDAHIF-CTEDQIQSEVDMMLQLVQSVYTDFGFNEIKYRLALRPEKRVGGD---DVW 442 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 A+ Q + P E + I + L D L Sbjct: 443 DKAEAALKQAMKDRTIEWVDAPGEGAFYGPKIECS--------------------LSDCL 482 Query: 272 PENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVV 325 G I+ GT +S+P + A++ DG M I G+ Sbjct: 483 -------------GRIWQCGTIQVDFSMPGRLDASYIAEDGSKQIPVMLHRAILGSFERF 529 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + GK +W ++P + +++ I D +++ L K G +D Sbjct: 530 MGILIEHYAGKLPLW---LSPVQAAVLTISEKQN---DYAQQVTQILQKRGLRANFDLRN 583 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P +++G K V +V ++ R Sbjct: 584 EKIGFKIREHTLQKVPYLLVIGDKEVESGQVAVRSR 619 >gi|260587370|ref|ZP_05853283.1| proline--tRNA ligase [Blautia hansenii DSM 20583] gi|331083671|ref|ZP_08332782.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] gi|260542237|gb|EEX22806.1| proline--tRNA ligase [Blautia hansenii DSM 20583] gi|330403882|gb|EGG83434.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] Length = 479 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 1/156 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ + + K YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFGIQYTDKENKLQYVHQTSWGM-TTRLIGAIIMVHGDNSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP + +I I+ + D K+ A+L G V DD + G +FA ++ Sbjct: 284 VLPPRIAPVQAVVIPIQQKKEGVLDNAYKLQAQLKAAGIRVKTDDTDKSPGFKFAEQEMR 343 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+++ G K + ++ + R T + +SL+ + Sbjct: 344 GIPVRIECGPKDMEANQAVVVRRDTREKITVSLDNL 379 >gi|195941538|ref|ZP_03086920.1| threonyl-tRNA synthetase (thrZ) [Borrelia burgdorferi 80a] gi|312149456|gb|ADQ29527.1| threonyl-tRNA synthetase [Borrelia burgdorferi N40] Length = 581 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 79/411 (19%), Positives = 163/411 (39%), Gaps = 55/411 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG D Y M Sbjct: 205 GLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 265 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGMMRARGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHE--FI 211 DA+ T ++ + ++ + G ++ + P +G D E Sbjct: 325 QDDAHII-CTHSQVLDEIKEVLRFAIYMWSKFGFSNLKAYLSTKPDKSVGNDSDWEMSLK 383 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 VL +T DF +P E I + A Y D+ K+ DSL Sbjct: 384 VLEET----------LSDFEVPYE------------IDKGGGAFYGPKIDL---KIVDSL 418 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAV 328 ++S + ++LP + T+ DGK+ M +G++ + Sbjct: 419 EREWQMSTIQFD----------FNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGI 468 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G +W ++P ++ +I + + + D K++ + G + D+ ++ Sbjct: 469 LVEHYGGAFPLW---LSPVQVVIIPV---NNIVEDYAIKVFNKFKNEGIRIKLDNSSSRM 522 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR----LTGIREDMSLEEVI 435 ++ P I+G + ++ ++ I+ R + GI+ D +L+ ++ Sbjct: 523 NAKIREYQAKKIPYMFIIGEREATEERISIRTRTNEQINGIKLDEALKFIL 573 >gi|91762425|ref|ZP_01264390.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] gi|91718227|gb|EAS84877.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] Length = 638 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 4/151 (2%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL + H + S G W G K + A +R Q + G E++ P Sbjct: 238 EAEKRDHRKLGKEMDLFHFREESPGSVFWHEKGWKLFQKLVAYMRARQEKAGYKEVNTPE 297 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG ++ YG+ M ++K P + +F +KSYR+LP Sbjct: 298 ILDRSLWEKSGHWEKYGEHMYTSQTPDEKIFAIKPMNCPGHVQVFNQGLKSYRDLPLRIS 357 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + R E G++R R F DA+ F Sbjct: 358 EFGKVHRYEPSGALHGLLRVRAFTQDDAHIF 388 >gi|326386620|ref|ZP_08208242.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium nitrogenifigens DSM 19370] gi|326208935|gb|EGD59730.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium nitrogenifigens DSM 19370] Length = 663 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 60/146 (41%), Gaps = 14/146 (9%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G W P G + + A +R + G E+ P + A W SG + Y + Sbjct: 263 LQAEAHGSVFWHPKGYRIWRELEAYMRRAIDGAGYREVKTPQVMDARQWEASGHWGKYRE 322 Query: 92 EMLRLADR------------NDKA-MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 M + D +D A M P + IFR IKSYR LP FY+ Sbjct: 323 NMFVIPDEVPNVEDEGPLVSDDAAWMALKPMNCPAHVLIFRQGIKSYRELPLRFYENGCC 382 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSF 163 R+E G+MR R+F DA+ F Sbjct: 383 HRNEPHGALHGLMRVRQFTQDDAHIF 408 >gi|116515019|ref|YP_802648.1| hypothetical protein BCc_078 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256873|gb|ABJ90555.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 642 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 6/184 (3%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 +L I + S G+ W G + +R + + IE+ P + LW +SG Sbjct: 248 LLSLYHIQKESPGMIFWHKNGYIIFKQLENFLRNKLFQNNYIEVKSPIIIDKSLWKKSGH 307 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 + Y + + N++ I P + IF+ +KSY++LP + R E Sbjct: 308 WKHYNQSIFTTKSENNQYCI-KPMNCPAHVQIFKYGLKSYKDLPIRMAEFGSCHRQETSG 366 Query: 146 RF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--- 201 G+ R R F DA+ F T + K N ++H G K I ++ + P Sbjct: 367 SLHGLFRVRGFTQDDAHIF-CTKKQIKSELNHCIRLLFDLYHTFGFKKIFIKFSTRPENR 425 Query: 202 IGGD 205 IG D Sbjct: 426 IGKD 429 >gi|45185649|ref|NP_983365.1| ACL039Wp [Ashbya gossypii ATCC 10895] gi|44981367|gb|AAS51189.1| ACL039Wp [Ashbya gossypii ATCC 10895] Length = 724 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M ++ S G WLP G + +N+ ++R E + G E+ P + ++ LW SG + +Y Sbjct: 331 MFNEMSPGSCFWLPHGTRIYNNLVELLRNEYRKRGYEEVITPNMYNSKLWETSGHWANYK 390 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + ++ P + +F+S +SYR LP+ + R+E G+ Sbjct: 391 ENMFTF-EVEKESFGLKPMNCPGHCVMFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 449 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 450 TRVRRFQQDDAHIF 463 >gi|56413681|ref|YP_150756.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362604|ref|YP_002142241.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|73919824|sp|Q5PH96|SYT_SALPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238689908|sp|B5BA42|SYT_SALPK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56127938|gb|AAV77444.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094081|emb|CAR59581.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 642 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 83/397 (20%), Positives = 149/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRV 324 +D L R + G + +SLP +SA++ G D + V + +G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVIIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---EYVNELTQKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 611 >gi|251789558|ref|YP_003004279.1| threonyl-tRNA synthetase [Dickeya zeae Ech1591] gi|247538179|gb|ACT06800.1| threonyl-tRNA synthetase [Dickeya zeae Ech1591] Length = 642 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 88/415 (21%), Positives = 151/415 (36%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N ++ G + I ++ + P IG D + Sbjct: 375 RVRGFTQDDAHIF-CTEDQVRDEVNNCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 D E + + P P E + I Sbjct: 434 ------WDRAEEDLAAALTENGLPFEYQPGEGAFYGPKIEFT------------------ 469 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 L D L R + G + +SLP +SA++ G + + M I G+ Sbjct: 470 --LHDCLD-------RAWQCGTV---QLDFSLPGRLSASYVGENNERQVPVMIHRAILGS 517 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 M ++ G +P +AP + ++NI D ++ +L G V Sbjct: 518 MERFIGILTEEFAG---FFPTWLAPVQAVVMNITDSQS---DYVSELTRKLQDAGIRVKA 571 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P ++ G K V KV ++ R M++ EVI Sbjct: 572 DLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMNVSEVIT 626 >gi|238753686|ref|ZP_04615048.1| Threonyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] gi|238708238|gb|EEQ00594.1| Threonyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] Length = 642 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 79/394 (20%), Positives = 141/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + N ++ G + I ++ + P S E Sbjct: 375 RVRGFTQDDAHVF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDEL 433 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ P E + I L D Sbjct: 434 WTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFT--------------------LHDC 473 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 L R + G + +SLP +SA++ G + M I G+M Sbjct: 474 LD-------RAWQCGTV---QLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G +P +AP ++ ++NI + +++ +L G V D E+ Sbjct: 524 ILTEEYAG---FFPTWIAPVQVVVMNITDSQA---EYVQEVTKKLQDAGIRVKADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++ G K + KV ++ R Sbjct: 578 IGFKIREHTLRRVPYMLVCGDKEIETGKVAVRTR 611 >gi|257389171|ref|YP_003178944.1| prolyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] gi|257171478|gb|ACV49237.1| prolyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] Length = 484 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 11/158 (6%) Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +P+ K V A Y GT ++ T+ D ++ S+G+ + R + A+I Sbjct: 222 MPDGKSVQA-----ATSHYLGTSFAEAFDITYVDEDEEEETAHTTSWGL-SWRAMGALIM 275 Query: 331 SSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 + D +G++ P ++AP ++ ++ I D+V A + + A L + G V +DD + Sbjct: 276 THSDDQGLVLPPTLAPKQVVVVPIWQEDTKDEVLEYAAD-VAAELDEAGVRVHFDDRDHR 334 Query: 388 -IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 G ++ +L G PL+V +G V D ++ + HR G Sbjct: 335 NPGFKYNDWELKGVPLRVEIGPNEVEDEELTLSHRPDG 372 >gi|157962084|ref|YP_001502118.1| threonyl-tRNA synthetase [Shewanella pealeana ATCC 700345] gi|189083623|sp|A8H4U6|SYT_SHEPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157847084|gb|ABV87583.1| threonyl-tRNA synthetase [Shewanella pealeana ATCC 700345] Length = 642 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 86/419 (20%), Positives = 151/419 (36%), Gaps = 48/419 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR++ + E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + + P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAV-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + + + G SI ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVQQEVSACIKMVYDTYETFGFNSIVVKLSTRPEKRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A+ Q + D +P E + I L Sbjct: 432 -EMWDRAEEALKQALKANDIEFEILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + GK W ++P ++ ++NI D +++ + G D Sbjct: 521 FLGILIEEYAGKFPAW---LSPVQVVVMNITDKQS---DYVDEVVNLFKEHGIRATKDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E+IG + L P ++VG + + + +V ++ R M +EE ++ S Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTREGVDLGKMQIEEFATKLKNQIS 633 >gi|189345705|ref|YP_001942234.1| threonyl-tRNA synthetase [Chlorobium limicola DSM 245] gi|238692169|sp|B3EEC1|SYT_CHLL2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189339852|gb|ACD89255.1| threonyl-tRNA synthetase [Chlorobium limicola DSM 245] Length = 657 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 89/407 (21%), Positives = 152/407 (37%), Gaps = 64/407 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + ++EEQ + G + + P + + +L+ SG Y Y L Sbjct: 273 GLPVWLPKGAVIRSELETFLKEEQRKRGYLPVYTPHIGNIELYKRSGHYPYYSDSQFPPL 332 Query: 95 RLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D + K Y P + I+ S ++SYR+LP + +R E G++R Sbjct: 333 TYHDEDGKQEQYLLKPMNCPHHHLIYSSKLRSYRDLPIRLTEFGTVYRHEQSGELNGLVR 392 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR------AESGPIGGD 205 +R F D++ + TPE +F LG + R A GG Sbjct: 393 ARGFTQDDSHIY-CTPEQLVDEICNAIDLTQFVFGTLGFSEVQTRLSMHDPANQQKYGGT 451 Query: 206 LSHEFIVLADTGETQVFCSKDFM--DFPIPSENTDF----DDIISLNSIVEQWTAPYAAT 259 + + E V + D M D+ I F D I +++ +W Sbjct: 452 AE-----IWEQAEKDVREAADRMGIDYFIGVGEASFYGPKIDFIVRDALGRKWQLGTVQV 506 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYG 318 V E+ FD ++ G+DG+ H V + Sbjct: 507 DYVMPER-FD------------------------------LSYIGSDGQKHRPVVIHRAP 535 Query: 319 IGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+M R + +IE + G +W +AP + ++ I + D + I+ L G Sbjct: 536 FGSMERFIGVLIEHT-AGNFPLW---LAPVQAVVLPIA---EEVHDYAKTIHTALLAAGI 588 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 V D E+IG + A++ P +IVG K ++ ++ +G Sbjct: 589 RVEIDTRNEKIGRKIREAEIGKIPCMIIVGQKERDSGEISLRRHRSG 635 >gi|319653813|ref|ZP_08007907.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317394349|gb|EFV75093.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 399 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 94/438 (21%), Positives = 175/438 (39%), Gaps = 56/438 (12%) Query: 17 DAEIASHK-----LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 +AE +H+ L L T M + + G+ +LP G + + + R + R G E+ Sbjct: 2 EAEKINHRKLGQELELFTSM--EEAPGMPFFLPNGMVMRNELESYWRRKHQRAGYQEIKT 59 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + +LW +SG ++ Y + M ++ +++ P + +F S +SYR LP Sbjct: 60 PIMMKQELWEQSGHWNHYHENMY-FSNVDEQNYAIKPMNCPGAILVFNSKRRSYRELPLR 118 Query: 132 FYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + ++ L R EL G++R R F DA+ F + + + +K+ V + G Sbjct: 119 YAELGLVHRHELSGSLNGLLRVRSFTQDDAHLFVMADQ-IEAEIDKILVLIDEFYSHFGF 177 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + P S E A+ V +K +++ I + F Sbjct: 178 -DYKVELSTRPEEYMGSQEMWERAEGALESVLKNKG-VNYQINPGDGAF----------- 224 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGK 308 Y D H + DSL R + G I + +P + + G D K Sbjct: 225 -----YGPKIDFH---ILDSL-------GRSWQCGTI---QLDFQMPQKFNCAYVGEDNK 266 Query: 309 DHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACE 366 H M I G++ A++ G +W ++P + +I I +H + + Sbjct: 267 LHLPIMIHRAIFGSVERFMAILIEHFAGDFPLW---LSPVQAKIIPISDSHAEY----AD 319 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + ++L + G D E++G + A P +++G K + + ++ R G Sbjct: 320 YVKSQLEEAGIRAEADFRTEKMGLKIREAAKQKVPYMLVIGDKEMEQQSLSLRKRKEGNI 379 Query: 427 EDMSLEEVINYASHRFSN 444 MS+++VI RF N Sbjct: 380 GVMSIKDVIE----RFIN 393 >gi|296110556|ref|YP_003620937.1| threonyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] gi|295832087|gb|ADG39968.1| threonyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] Length = 654 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 83/393 (21%), Positives = 155/393 (39%), Gaps = 48/393 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G V I +++ G + P L + +L+ SG +D Y ++M Sbjct: 266 GLPVWLPNGATIRRQVERYITDKELANGYQHVYTPVLSNLNLYKTSGHWDHYREDMFPPM 325 Query: 98 DRNDKAMI-----YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D D + P+H +M +F+ +SYR LP ++ + R E G+ R Sbjct: 326 DMGDGEFLELRPMNCPSH--IM--VFKHKPRSYRELPIRIAELGMMHRYEKSGALTGLSR 381 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE + D ++F + PE + + + + ++ + R LS+ Sbjct: 382 VREMTLNDGHTF-VEPEKLEEEFKSILTMMMEVYRDFNITDYRFR---------LSYR-- 429 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDS 270 D T+ + D M ++ D + L+ E A Y DV + + Sbjct: 430 ---DPKNTEKYFDDDEMWEKSQAQLKRAMDDLKLDYYEAEGEAAFYGPKLDVQTKT---A 483 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAV 328 L + +S ++ F +++L T+ GADG+D++ V + +G M A Sbjct: 484 LGGEETMSTIQLD----FLLPERFNL----TYIGADGQDNHRPVMLHRGIVGTMERFTAY 535 Query: 329 IESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + + G W ++P ++ +I N+ AH D + L G V + Sbjct: 536 LIEMYKGAFPTW---LSPLQVQIIPVNLAAHG----DYANAVQKELQAAGLRVNVEKKEA 588 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++G A P +++G V++ V I+ Sbjct: 589 KMGYLIREAQTNKVPYTLVLGDSEVNEQTVTIR 621 >gi|163756231|ref|ZP_02163346.1| uracil phosphoribosyltransferase [Kordia algicida OT-1] gi|161323843|gb|EDP95177.1| uracil phosphoribosyltransferase [Kordia algicida OT-1] Length = 647 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 85/459 (18%), Positives = 169/459 (36%), Gaps = 63/459 (13%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD +L L T + +G+ WLP G + +++ Q + Sbjct: 228 KEYLHLLEEAKKRDHRKLGKELELFT-FSQKVGQGLPLWLPKGAALRSQLENFLKKAQQK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD--RNDKAMIYGPTHEEVMTDIFRSH 121 G + P + +L+V SG Y YG++ + + + D+ + P + +I+ + Sbjct: 287 AGYEMVISPHIGQKELYVTSGHYAKYGEDSFQAINTPKEDEEFLLKPMNCPHHCEIYNTK 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + + +R E G+ R R F DA+ F TP+ + + Sbjct: 347 PFSYKDLPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CTPDQLDQEFKNVIDL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + +F LG + + + L D + + + Sbjct: 406 VMYVFESLGFDNFTAQ--------------VSLRDPEKPEKYIGS--------------- 436 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT 292 E W A + EK + + E + G + +G + GT Sbjct: 437 --------TENWEKAENAIINAAKEKELNYVIEYGEAAFYGPKLDFMVKDALGRSWQLGT 488 Query: 293 ---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 Y+LP T+KG+D + H V + G+M A++ G +W + Sbjct: 489 IQVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFIAILLEHTGGNFPLWLMTEQA 548 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 + + + + +K+ L D+ E +G + A++ P +I+ Sbjct: 549 ILLPV------SEKYENYGKKVLTLLENHEIRAQIDNRNETVGKKIREAEMSKVPFMLII 602 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G + D V ++ G +++E + +N+ Sbjct: 603 GEQEEKDGTVSVRRHGVGDIGTLTMEAFADMVKEEINNS 641 >gi|118444161|ref|YP_878835.1| prolyl-tRNA synthetase [Clostridium novyi NT] gi|152016596|sp|A0Q2I3|SYP_CLONN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118134617|gb|ABK61661.1| prolyl-tRNA synthetase [Clostridium novyi NT] Length = 478 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 78/156 (50%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG +S + + + + YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDNFSKAFNIQYNDKNSQLQYVHQTSWGV-TTRLIGAIIMVHGDDSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 P +AP ++ ++ I H + D E++ R++KV V D + G +F ++ Sbjct: 284 KLPPRIAPLQVVIVPIAQHKEGVLDKAEELRQRIAKVA-RVKVDSSDKMPGWKFNEYEMK 342 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+++ VG K + +++V + R T + +S++E+ Sbjct: 343 GVPVRLEVGPKDIENNQVVLVRRDTREKIFVSMDEL 378 >gi|293376470|ref|ZP_06622699.1| threonine--tRNA ligase [Turicibacter sanguinis PC909] gi|325842051|ref|ZP_08167588.1| threonine--tRNA ligase [Turicibacter sp. HGF1] gi|292644892|gb|EFF62973.1| threonine--tRNA ligase [Turicibacter sanguinis PC909] gi|325489773|gb|EGC92129.1| threonine--tRNA ligase [Turicibacter sp. HGF1] Length = 645 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 79/418 (18%), Positives = 180/418 (43%), Gaps = 44/418 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G K + I E + G ++ P + S DL+ SG + Y ++M Sbjct: 259 QGLPIWLPNGMKVRQQIERYITELEEDYGYQHVATPVMGSVDLYRTSGHWAHYQEDMFVP 318 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + +++ ++ P ++++ ++SYR+LP + + ++ R E G+ R R Sbjct: 319 MEMDNEELVLRPMSCPHHMMVYKTKLRSYRDLPIRYAEQVIQHRFEASGALTGLERVRAM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D++ F + P+ K +++ L + HR+ +K G ++++ + L D Sbjct: 379 TLTDSHLF-VRPDQIKEEFSRC----LELIHRV-IKD---------FGVEINYYRLSLRD 423 Query: 216 TGETQVFCSKDFMDFPIPSENTD--FDDIISLNSI----VEQWTAPYAATSDVHNEKLFD 269 + + D M EN + + + N+I E A Y D+ ++ Sbjct: 424 PENKEKYFDDDQM-----WENAESMLRETLIENNIPFIEAEGEAAFYGPKLDI---QIKT 475 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAV 328 +L + +S ++ F ++ L T+ G K V M IG A Sbjct: 476 ALGHDITMSTIQLD----FLLPERFDL----TYVSETGEKVRPVVMHRGLIGTYERFMAY 527 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + ++ G +W +AP ++++I + ++Q + +++ L K + D+ E++ Sbjct: 528 LIETYKGAFPLW---LAPTQVTVIPV--NNQYHLEYAKEVAKELRKYRVRLEIDEREEKM 582 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 G + + P+ +++G K V++++V + + + L+E +++ + + Sbjct: 583 GYKIRESQTKKIPMSIVLGDKEVANNEVTFRRFGEQKTQTLPLKEFVHFLVEEIAERK 640 >gi|229017690|ref|ZP_04174581.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273] gi|228743616|gb|EEL93725.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273] Length = 639 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + +LW +SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQELWEKSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|45358259|ref|NP_987816.1| prolyl-tRNA synthetase [Methanococcus maripaludis S2] gi|74579597|sp|Q6LZD3|SYP_METMP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|44921016|emb|CAF30252.1| Prolyl-tRNA synthetase [Methanococcus maripaludis S2] Length = 460 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 4/148 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++G + G ++ F+ DG+ +V YGI R +A++I D KG+ Sbjct: 212 GKTMQIGTVHNLGQNFAKTFELEFETPDGEKDFVYQTCYGISD-RAIASLISVHGDEKGL 270 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P VAP +I LI + K +++ D +++ L K V DD + G ++ + Sbjct: 271 VIPVDVAPIQIVLIPLLFKGKEEIVMDKIKELNNTL-KSEFRVHLDDRDIRPGRKYNDWE 329 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 L G PL++ +G + + + I R TG Sbjct: 330 LKGVPLRIELGPRDIENGHALIVRRDTG 357 Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 84/221 (38%), Gaps = 18/221 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG +LP G K I+R+ + TG E P L +L + G + ++ + Sbjct: 24 KGCGVYLPYGFKIRRYSFEILRKLLDETGHDETLFPMLIPENLLAKEGEHIKGFEDEVFW 83 Query: 97 ADRNDKA-----MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 K + PT E M + + IK + +LP YQ+ FR E + ++R Sbjct: 84 VTHGGKTPLEVKLALRPTSETTMYYMMKQWIKVHTDLPLKLYQVVNTFRYETKHTRPLIR 143 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPI-GGDLSH 208 RE + K+A++ T + + Y F +G+ I R E G D + Sbjct: 144 LREIMSFKEAHTAHATKKECDAQIEEALTLYKAFFDEIGVPYVISKRPEWDKFPGADYTM 203 Query: 209 EFIVLADTGET----------QVFCSKDFMDFPIPSENTDF 239 F + G+T Q F ++F P DF Sbjct: 204 AFDTIYPDGKTMQIGTVHNLGQNFAKTFELEFETPDGEKDF 244 >gi|262189799|ref|ZP_06048144.1| prolyl-tRNA synthetase [Vibrio cholerae CT 5369-93] gi|262034317|gb|EEY52712.1| prolyl-tRNA synthetase [Vibrio cholerae CT 5369-93] Length = 91 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 49/83 (59%) Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + A EK+YA L+ G +V +DD E+ G F+ +L+G P +I+G + + + E K+ Sbjct: 9 VQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKN 68 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R G +E +++E +I++ + + Sbjct: 69 RRQGEKEAVAMESIIDFIQAKLA 91 >gi|150024985|ref|YP_001295811.1| threonine--tRNA ligase [Flavobacterium psychrophilum JIP02/86] gi|166223340|sp|A6GY22|SYT_FLAPJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|149771526|emb|CAL42995.1| Threonine--tRNA ligase [Flavobacterium psychrophilum JIP02/86] Length = 648 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 83/430 (19%), Positives = 159/430 (36%), Gaps = 61/430 (14%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +L +L+E R K + + +G+ WLP G D + +++ Q + G Sbjct: 229 YLELLEEAKRRDHRKLGKELELFAFSQKVGQGLPLWLPKGAALRDRLEQFLKKAQKKGGY 288 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 ++ P + +L+V SG Y YG + + + + P + +I+ S Sbjct: 289 EQVVTPHIGQKELYVTSGHYAKYGADSFQPISTPTEGEEFLLKPMNCPHHCEIYNVRPWS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y++LP + + +R E G+ R R F DA+ F TP+ + K+ L Sbjct: 349 YKDLPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIF-CTPDQLDEEFKKVIDLVLY 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 +F LG ++ + I L D + D Sbjct: 408 VFGSLGFENFTAQ--------------ISLRDKENRDKYIGSD----------------- 436 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT--- 292 E W A + +K +++ E + G + +G + GT Sbjct: 437 ------ENWEKAENAIINAARDKNLNTVVEYGEAAFYGPKLDFMVKDALGRSWQLGTIQV 490 Query: 293 KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 Y+LP T+KG+D + H V + G+M A++ G +W + P + Sbjct: 491 DYNLPERFELTYKGSDDQLHRPVMIHRAPFGSMERFIAILLEHTAGNFPLW---LMPEQA 547 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 ++ + ++ +K+ L D+ E IG + A++ P +IVG + Sbjct: 548 IILCLSDKYEIY---AKKVLNLLENHEIRALIDNRNESIGRKIRDAEMQKTPFMLIVGEE 604 Query: 410 FVSDSKVEIK 419 ++ + I+ Sbjct: 605 EEKNNTISIR 614 >gi|114559269|ref|XP_001168944.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 9 [Pan troglodytes] Length = 718 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 100/434 (23%), Positives = 167/434 (38%), Gaps = 72/434 (16%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E G E+ PT Sbjct: 296 EAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPT 355 Query: 74 LQSADLWVESGRYDSYGKEMLRL----ADRNDKA------------MIYGPTHEEVMTDI 117 L S LW +SG ++ Y ++M + +DR + + P + + Sbjct: 356 LFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLM 415 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-----GSK 171 F +S+R LP R E G+ R R F DA+ F T + S Sbjct: 416 FAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSC 475 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + + + L RL L + P SG +G C D + Sbjct: 476 LDFLRSVYAVLGFSFRLALSTRP----SGFLGDP-----------------CLWDQAEQV 514 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 + +F + LNS A Y DVH L D+L R + G I Sbjct: 515 LKQALKEFGEPWDLNSGD---GAFYGPKIDVH---LHDAL-------GRPHQCGTI---Q 558 Query: 292 TKYSLPM--SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 + LP+ +KG G + V + +G++ + V+ S GK WP ++PF+ Sbjct: 559 LDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGGK---WPLWLSPFQ 615 Query: 349 ISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + +I + + ++ ++A + + A D D G + + A L + Q +VG Sbjct: 616 VVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDA---DSGLTLSRRIRRAQLAHYNFQFVVG 672 Query: 408 SKFVSDSKVEIKHR 421 K S V I+ R Sbjct: 673 QKEQSKRTVNIRTR 686 >gi|326693745|ref|ZP_08230750.1| threonyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773] Length = 654 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 83/393 (21%), Positives = 154/393 (39%), Gaps = 48/393 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G V I +++ G + P L + +L+ SG +D Y ++M Sbjct: 266 GLPVWLPNGATIRRQVERYITDKELANGYQHVYTPVLSNLNLYKTSGHWDHYREDMFPPM 325 Query: 98 DRNDKAMI-----YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D D + P+H +M +F+ +SYR LP ++ + R E G+ R Sbjct: 326 DMGDGEFLELRPMNCPSH--IM--VFKHKPRSYRELPIRIAELGMMHRYEKSGALTGLSR 381 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE + D ++F + PE + + + + ++ + R LS+ Sbjct: 382 VREMTLNDGHTF-VEPEKLEEEFKSILTMMMEVYRDFNITDYRFR---------LSYR-- 429 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDS 270 D T+ + D M ++ D + L+ E A Y DV + + Sbjct: 430 ---DPKNTEKYFDDDEMWEKSQAQLKRAMDDLGLDYYEAEGEAAFYGPKLDVQTKT---A 483 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAV 328 L + +S ++ F +++L T+ GADG+D++ V + +G M A Sbjct: 484 LGNEETMSTIQLD----FLLPERFNL----TYIGADGQDNHRPVMLHRGIVGTMERFTAY 535 Query: 329 IESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + + G W +AP ++ +I N+ AH E+I +L G + Sbjct: 536 LIEMYKGAFPTW---LAPLQVQIIPVNLGAHGAY----AEQIKKQLQDAGLRANVETKDA 588 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++G A P +++G V V ++ Sbjct: 589 KMGYLIREAQTNKIPYTLVLGDSEVEGQTVTVR 621 >gi|20070344|ref|NP_079426.2| threonyl-tRNA synthetase, mitochondrial precursor [Homo sapiens] gi|74752395|sp|Q9BW92|SYTM_HUMAN RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; AltName: Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor gi|12802990|gb|AAH00541.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|14603040|gb|AAH09997.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|55958996|emb|CAI15488.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|119573933|gb|EAW53548.1| threonyl-tRNA synthetase-like 1, isoform CRA_a [Homo sapiens] gi|168275836|dbj|BAG10638.1| threonyl-tRNA synthetase [synthetic construct] Length = 718 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 100/434 (23%), Positives = 167/434 (38%), Gaps = 72/434 (16%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E G E+ PT Sbjct: 296 EAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPT 355 Query: 74 LQSADLWVESGRYDSYGKEMLRL----ADRNDKA------------MIYGPTHEEVMTDI 117 L S LW +SG ++ Y ++M + +DR + + P + + Sbjct: 356 LFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLM 415 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-----GSK 171 F +S+R LP R E G+ R R F DA+ F T + S Sbjct: 416 FAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSC 475 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + + + L RL L + P SG +G C D + Sbjct: 476 LDFLRSVYAVLGFSFRLALSTRP----SGFLGDP-----------------CLWDQAEQV 514 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 + +F + LNS A Y DVH L D+L R + G I Sbjct: 515 LKQALKEFGEPWDLNSGD---GAFYGPKIDVH---LHDAL-------GRPHQCGTI---Q 558 Query: 292 TKYSLPM--SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 + LP+ +KG G + V + +G++ + V+ S GK WP ++PF+ Sbjct: 559 LDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGGK---WPLWLSPFQ 615 Query: 349 ISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + +I + + ++ ++A + + A D D G + + A L + Q +VG Sbjct: 616 VVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDA---DSGLTLSRRIRRAQLAHYNFQFVVG 672 Query: 408 SKFVSDSKVEIKHR 421 K S V I+ R Sbjct: 673 QKEQSKRTVNIRTR 686 >gi|326792022|ref|YP_004309843.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427] gi|326542786|gb|ADZ84645.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427] Length = 657 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 84/409 (20%), Positives = 163/409 (39%), Gaps = 43/409 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G + + + + +E+ + G + P + +DL+ SG +D Y M L Sbjct: 261 QGLPLLMPKGARIVQTLQRFVEDEEEKRGYVLTKTPLMAKSDLYKMSGHWDHYKDGMFVL 320 Query: 97 ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D ++ P ++ + SYR+LP + + FR+E G++R R Sbjct: 321 GDEEKDKEVFALRPMTCPFQFTVYNAEQHSYRDLPIRYGETSTLFRNESSGEMHGLIRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 +F + + + TPE + + + + LG+++ D+S+ F Sbjct: 381 QFTISEGH-LVCTPEQLEDEFRGVIELINYMMATLGIEN------------DISYRFSKW 427 Query: 214 --ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY---AATSDVHNEKLF 268 A+TG+ +++ P E T+ + +I++ Y + + KL Sbjct: 428 DPANTGK--------YINDPEAWERTEG----LMRNILDHLQINYEEAVGEAAFYGPKLD 475 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 I V F G + + T+ ADG K H + + IG A Sbjct: 476 IQFKNVHGKEDTIITVQIDFALGER----LGMTYIDADGEKKHPLIIHRTSIGCYERTLA 531 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G+ +P +AP + ++ + D+ A E + A V D E+ Sbjct: 532 MLIEKYAGQ---FPTWLAPVAVKVLPLS--DKYADYAAEVVKAFKDHGILKVEADYRTEK 586 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 IG + A + P V+VG++ + + V ++ R G SLE +N Sbjct: 587 IGYKIREARMERIPYIVVVGAEEMENKTVSVRSRQKGDEGVQSLESFVN 635 >gi|253998429|ref|YP_003050492.1| threonyl-tRNA synthetase [Methylovorus sp. SIP3-4] gi|313200504|ref|YP_004039162.1| threonyl-tRNA synthetase [Methylovorus sp. MP688] gi|253985108|gb|ACT49965.1| threonyl-tRNA synthetase [Methylovorus sp. SIP3-4] gi|312439820|gb|ADQ83926.1| threonyl-tRNA synthetase [Methylovorus sp. MP688] Length = 640 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 82/408 (20%), Positives = 143/408 (35%), Gaps = 70/408 (17%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G V +R + G E+ PT+ LW +SG + +Y + Sbjct: 260 MQDEAPGMVFWHPRGWNLWQEVEQYMRGLFRQYGYQEVKTPTIMDRSLWEKSGHWQNYRE 319 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + P + IF S + SYR+LP + R+E G+M Sbjct: 320 NMFTTSSENRDYAV-KPMNCPGHIQIFNSGLHSYRDLPLRLAEFGSCHRNEPSGALHGLM 378 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + K V + + G + ++ + P +G D Sbjct: 379 RVRGFTQDDAHIF-CTEDQVKQEVADFIVMLYQAYKDFGFNDVLVKLSTRPEKRVGSD-- 435 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDV--HNE 265 E W A+ + N Sbjct: 436 ------------------------------------------ETWDKAEASLAAALRENN 453 Query: 266 KLFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQ 313 FD P IE +G ++ GT ++LP + A + D + H V Sbjct: 454 LAFDLQPGEGAFYGPKIEFTLKDSLGRLWQCGTIQLDFNLPERLGAEYVAEDNTRKHPVM 513 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 + +G+M ++ ++ G W +AP + ++NI +++ A L Sbjct: 514 LHRAIVGSMERFLGILIENYAGAMPTW---LAPVQAMVLNITDSQSAY---VQEVVAELR 567 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 K G V D E+I + L P ++ G + + +V ++ R Sbjct: 568 KNGFRVDSDLRNEKITYKIREHSLQKLPYLLVAGDREMQSGQVAVRTR 615 >gi|224476774|ref|YP_002634380.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|254783537|sp|B9DNC9|SYT_STACT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|222421381|emb|CAL28195.1| threonyl-tRNA synthetase 1 [Staphylococcus carnosus subsp. carnosus TM300] Length = 647 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 82/405 (20%), Positives = 171/405 (42%), Gaps = 41/405 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + + +L+ SG +D Y +M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVALGYDHVYTPVMANVELYKTSGHWDHYQDDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ + M+ P + I+++ SYR LP ++ R E G+ R R Sbjct: 322 KLDETEEMVLRPMNCPHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + D++ F + P+ K + ++ L ++ G ++ R + P + + + Sbjct: 382 TLNDSHIF-VRPDQIKEEFKRVVELILDVYEDFGFENYSFRLSYRDPEDKEKYFDDDEMW 440 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + E+ + + D M P +++ I A Y DV ++ ++ + Sbjct: 441 ERAESMLKEAVDEMGLP-------YEEAIG-------EAAFYGPKLDV---QVKTAMGKE 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L + G DG++H + G+ + R VA + E + Sbjct: 484 ETLSTAQLD----FLLPERFDL----AYIGKDGEEHRPVVIHRGVVSTMERFVAFLTEET 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ +I N+ H D +I L G V DD E++G Sbjct: 536 ---KGA-FPTWLAPKQVEIIPVNVDLH----YDYARQIQDELKSQGVRVEIDDRNEKMGY 587 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + A + P Q+++G K + +++V ++ + +E + +E I Sbjct: 588 KIREAQMHKIPYQLVIGDKEIENNEVNVRKYGSKDQETVEKDEFI 632 >gi|11066246|gb|AAG28517.1|AF197899_1 prolyl-tRNA synthetase [Methanococcus maripaludis] Length = 460 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 4/148 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++G + G ++ F+ DG+ +V YGI R +A++I D KG+ Sbjct: 212 GKTMQIGTVHNLGQNFAKTFELEFETPDGEKDFVYQTCYGISD-RAIASLISVHGDEKGL 270 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P VAP +I LI + K +++ D +++ L K V DD + G ++ + Sbjct: 271 VIPVDVAPIQIVLIPLLFKGKEEIVMDKIKELNKTL-KSEFRVHLDDRDIRPGRKYNDWE 329 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 L G PL++ +G + + + I R TG Sbjct: 330 LKGVPLRIELGPRDIENGHALIVRRDTG 357 Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 84/221 (38%), Gaps = 18/221 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG +LP G K I+R+ + TG E P L +L + G + ++ + Sbjct: 24 KGCGVYLPYGFKIRRYSFEILRKLLDETGHDETLFPMLIPENLLAKEGEHIKGFEDEVFW 83 Query: 97 ADRNDKA-----MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 K + PT E M + + IK + +LP YQ+ FR E + ++R Sbjct: 84 VTHGGKTPLEVKLALRPTSETTMYYMMKQWIKVHTDLPLKLYQVVNTFRYETKHTRPLIR 143 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPI-GGDLSH 208 RE + K+A++ T + + Y F +G+ I R E G D + Sbjct: 144 LREIMSFKEAHTAHATKKECDAQIEEALTLYKAFFDEIGVPYVISKRPEWDKFPGADYTM 203 Query: 209 EFIVLADTGET----------QVFCSKDFMDFPIPSENTDF 239 F + G+T Q F ++F P DF Sbjct: 204 AFDTIYPDGKTMQIGTVHNLGQNFAKTFELEFETPDGEKDF 244 >gi|119513050|ref|ZP_01632106.1| threonyl-tRNA synthetase [Nodularia spumigena CCY9414] gi|119462292|gb|EAW43273.1| threonyl-tRNA synthetase [Nodularia spumigena CCY9414] Length = 602 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 8/171 (4%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 Q G+ W P G + +++EQ + G + + P + DL+ SG + Y ++ Sbjct: 211 EQVGPGLPLWTPKGTLLRSVLEDFLKKEQLKRGYLPVVTPHIARVDLFKTSGHWQKYKED 270 Query: 93 MLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M L +++A + P + I++S ++SYR LP + +R E Sbjct: 271 MFPLMSDDEEAAALEQGFVLKPMNCPFHIQIYKSELRSYRELPIRLAEFGTVYRYEQSGE 330 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 G+ R R F + D++ F +TPE + + L +F L LK+ R Sbjct: 331 LGGLTRVRGFTVDDSHLF-VTPEQLDSEFLNVVDLILSVFKSLQLKNFKAR 380 >gi|239637520|ref|ZP_04678492.1| threonyl-tRNA synthetase [Staphylococcus warneri L37603] gi|239596738|gb|EEQ79263.1| threonyl-tRNA synthetase [Staphylococcus warneri L37603] Length = 645 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 90/409 (22%), Positives = 172/409 (42%), Gaps = 49/409 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M + Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPM 321 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 +L + + M+ P + I+ + SYR LP ++ R E G+ R R Sbjct: 322 KLDETEE--MVLRPMNCPHHMMIYNNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVR 379 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 + D++ F + P+ K + ++ ++ G + R LS+ Sbjct: 380 GMTLNDSHIF-VRPDQIKEEFKRVVNMIQDVYKDFGFEDYRFR---------LSYR---- 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLN---SIVEQWTAPYAATSDVHNEKLFDS 270 D + + + D M + + D + L+ +I E A Y DV ++ + Sbjct: 426 -DPEDKEKYFDDDEMWNKAENMIKEAADELGLSYEEAIGE--AAFYGPKLDV---QVKTA 479 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAV 328 + + + +S ++ F ++ L T+ G DG+ H + G+ + R VA + Sbjct: 480 MGKEETLSTAQLD----FLLPERFEL----TYIGQDGEQHRPVVIHRGVVSTMERFVAFL 531 Query: 329 IESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 E + KG +P +AP ++ +I N+ H D + I L G V DD E Sbjct: 532 TEET---KG-AFPTWLAPKQVEIIPVNLDLH----YDYAKSIQDELKSQGVRVEIDDRNE 583 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++G + A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 584 KMGYKIREAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETLEKDEFI 632 >gi|116070824|ref|ZP_01468093.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. BL107] gi|116066229|gb|EAU71986.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. BL107] Length = 615 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 86/415 (20%), Positives = 155/415 (37%), Gaps = 39/415 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ G + P + LW SG D Y + M Sbjct: 229 GLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYTPHVADISLWKTSGHLDFYAESMFGPM 288 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 289 QVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 347 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 DA+ F L P+ ++ RI + + + P S LA Sbjct: 348 TQDDAHVFCL-PDQISDEILRILDLTERILSTFDFNNYEINLSTRPEKSIGSEAVWDLAT 406 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 G T+ K + N D E A Y D+ K+ D++ Sbjct: 407 KGLTEALERKGW--------NYKID---------EGGGAFYGPKIDL---KIEDAIGRMW 446 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHD 334 + S ++ FG Y ADG K + + G++ ++ ++ Sbjct: 447 QCSTIQLDFNLPERFGLDYV--------AADGSKQQPIMIHRAIFGSLERFFGIMTENYA 498 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 G W +AP +I L+ + D V + E++ +L G D G+++G Sbjct: 499 GDFPFW---LAPEQIRLLPVT--DDV-QPYAEQLLDQLKTAGIRATIDQSGDRLGKIIRT 552 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 + + P+ ++G+K + V ++ R G S++ ++N A + +P L Sbjct: 553 GEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVTSVDALLNAAKWANTERQPGL 607 >gi|39644807|gb|AAH07824.2| TARS2 protein [Homo sapiens] Length = 709 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 100/434 (23%), Positives = 167/434 (38%), Gaps = 72/434 (16%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E G E+ PT Sbjct: 287 EAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPT 346 Query: 74 LQSADLWVESGRYDSYGKEMLRL----ADRNDKA------------MIYGPTHEEVMTDI 117 L S LW +SG ++ Y ++M + +DR + + P + + Sbjct: 347 LFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLM 406 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-----GSK 171 F +S+R LP R E G+ R R F DA+ F T + S Sbjct: 407 FAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSC 466 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + + + L RL L + P SG +G C D + Sbjct: 467 LDFLRSVYAVLGFSFRLALSTRP----SGFLGDP-----------------CLWDQAEQV 505 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 + +F + LNS A Y DVH L D+L R + G I Sbjct: 506 LKQALKEFGEPWDLNSGD---GAFYGPKIDVH---LHDAL-------GRPHQCGTI---Q 549 Query: 292 TKYSLPM--SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 + LP+ +KG G + V + +G++ + V+ S GK WP ++PF+ Sbjct: 550 LDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGGK---WPLWLSPFQ 606 Query: 349 ISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + +I + + ++ ++A + + A D D G + + A L + Q +VG Sbjct: 607 VVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDA---DSGLTLSRRIRRAQLAHYNFQFVVG 663 Query: 408 SKFVSDSKVEIKHR 421 K S V I+ R Sbjct: 664 QKEQSKRTVNIRTR 677 >gi|297808713|ref|XP_002872240.1| AT5g26830/F2P16_90 [Arabidopsis lyrata subsp. lyrata] gi|297318077|gb|EFH48499.1| AT5g26830/F2P16_90 [Arabidopsis lyrata subsp. lyrata] Length = 713 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 13/173 (7%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIR 58 ++ K +L L+E A+ H+L+ + + HQ S G Y +LPLG + + + I+ Sbjct: 304 KQLKKYLQFLEE----AKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIK 359 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTD 116 ++ + G E+ P + + LW SG D+Y M N + +G P + Sbjct: 360 KQYWQRGYTEVITPNMYNMALWETSGHADNYKDNMFTF---NIEKQEFGLKPMNCPGHCL 416 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 IF+ ++SYR LP + R+E G+ R R F DA+ F T + Sbjct: 417 IFQHRVRSYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQ 469 >gi|326674558|ref|XP_002664809.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like, partial [Danio rerio] Length = 441 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 86/417 (20%), Positives = 160/417 (38%), Gaps = 58/417 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H S G ++P G + + I+ E R G E+ PTL S LW SG + Y + Sbjct: 56 FHDVSPGSCFFMPKGAHIYNTLTDFIKSEYRRRGFSEVVTPTLFSTALWERSGHWQHYSE 115 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M ++ P + +F ++S+R +P + R+E G+ Sbjct: 116 NMFSVSSET-HTFALKPMNCPAHCVMFEQRLRSWREMPIRWADFGALHRNEASGTLGGLT 174 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--GDLSH 208 R R F DA+ F TPE + + ++R +R+ S + P GD + Sbjct: 175 RVRRFCQDDAHIF-CTPEQLEQEITAC-LDFVRSVYRVFGFSFHCLLSTRPASSMGDSA- 231 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDV 262 L D E Q+ SL E+W A Y D+ Sbjct: 232 ----LWDCAEQQLES--------------------SLKLFQERWELNPGDGAFYGPKIDI 267 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK-DHYVQMGSYGIGA 321 + D+L + + ++ F +++L + GADG+ + + +G+ Sbjct: 268 ---LIRDALGRQHQCATIQLD----FQLPIRFNL----QYVGADGQMKRPIMIHRAVLGS 316 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG--CDV 379 + + A++ + GK WP ++P ++ ++ + + +++ +RL + G D+ Sbjct: 317 LERMIAILAENFGGK---WPFWLSPAQVMVVPVGGSSEA---YAQQVVSRLREAGFMADI 370 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DD G + + A L + +VG K V ++ R +LE+V+ Sbjct: 371 D-DDHGNTLNKKIRSAQLAQYNYIFVVGEKESECGTVSVRTRAGQQIGQKTLEDVMK 426 >gi|253680953|ref|ZP_04861756.1| proline--tRNA ligase [Clostridium botulinum D str. 1873] gi|253562802|gb|EES92248.1| proline--tRNA ligase [Clostridium botulinum D str. 1873] Length = 500 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 78/156 (50%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG +S + + + + YV S+G+ R++ A+I D G+ Sbjct: 247 GKALQSGTSHNFGDNFSKAFNIQYNDKNSQLQYVHQTSWGV-TTRLIGAIIMVHGDDSGL 305 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 P +AP ++ ++ I H + D E++ ++SKV V D + G +F ++ Sbjct: 306 KLPPRIAPLQVVIVPIAQHKEGVLDKAEELRQQISKVA-RVKVDSSDKMPGWKFNEYEMK 364 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+++ VG K + +++V + R T + +S++E+ Sbjct: 365 GVPVRLEVGPKDIENNQVVLVRRDTREKIFVSMDEL 400 >gi|304397616|ref|ZP_07379493.1| threonyl-tRNA synthetase [Pantoea sp. aB] gi|304354788|gb|EFM19158.1| threonyl-tRNA synthetase [Pantoea sp. aB] Length = 642 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 84/400 (21%), Positives = 148/400 (37%), Gaps = 54/400 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHVF-CTEEQVRDEVNSCIRMVYDMYSTFGFEKIVVKLSTRPEKRIGTD-- 431 Query: 208 HEFIVLADTGETQVFCS--KDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 + D E + + ++ ++F P E + I Sbjct: 432 ----EMWDRAEEDLAAALNENNIEFEFQPGEGAFYGPKIEFT------------------ 469 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 L+D L R + G + +SLP + AT+ G + M I G+ Sbjct: 470 --LYDCLD-------RAWQCGTV---QLDFSLPKRLEATYVGENNDRQTPVMIHRAILGS 517 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 M ++ G +P +AP ++ ++NI + E + +L G V Sbjct: 518 MERFIGILTEEFAG---FFPTWLAPLQVVVMNITDGQA---EYVESLTRKLQNAGIRVKA 571 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + L P ++ G K V KV ++ R Sbjct: 572 DLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 611 >gi|290981498|ref|XP_002673467.1| predicted protein [Naegleria gruberi] gi|284087051|gb|EFC40723.1| predicted protein [Naegleria gruberi] Length = 670 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 1/148 (0%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSY 89 H H+ G+ S LP G++ ++V + +RE R G E+ P + + DLW +SG + + Sbjct: 287 FFHPHAPGMVSLLPHGKRICNSVQSQLREAYWRYGFAEVQSPIVLNKDLWYYQSGSRNQW 346 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 ++ + + + I P ++ + ++R+ +SYR+LP + + F D ++P Sbjct: 347 WQQYNFALEIDKEYYILKPYNKPIHCIMYRNKSRSYRDLPIRYVEFGSVFPDNIKPFRLN 406 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R R F ++ F + + K N + Sbjct: 407 GRLRSFQKDESTIFCQSDQTKKEVLNCL 434 >gi|160902301|ref|YP_001567882.1| threonyl-tRNA synthetase [Petrotoga mobilis SJ95] gi|189083616|sp|A9BHF0|SYT_PETMO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160359945|gb|ABX31559.1| threonyl-tRNA synthetase [Petrotoga mobilis SJ95] Length = 640 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 7/168 (4%) Query: 25 LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESG 84 ML++ M + G+ +LP G+ L+ + A R+ + G +E+ P + + LW +SG Sbjct: 253 FMLQSEM----APGMPFFLPNGKIVLNELMAYSRQVHKKYGYVEVETPQIMNIKLWHQSG 308 Query: 85 RYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 +D Y KE + ++ D M P + I++++ SYR+LP ++ R E Sbjct: 309 HWDHY-KENMFFTEKEDMPMAVKPMNCPGHILIYKNNFVSYRDLPIRMFEFGKVHRYERS 367 Query: 145 PRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 G+ R R F DA+ F + P + K+ IF G K Sbjct: 368 GVLHGLFRVRAFTQDDAHIFCM-PSQMEEEIIKVIQLTNEIFSTFGFK 414 >gi|332638317|ref|ZP_08417180.1| threonyl-tRNA synthetase [Weissella cibaria KACC 11862] Length = 658 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 83/392 (21%), Positives = 158/392 (40%), Gaps = 47/392 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I + + + G + P + + +L+ +SG +D Y +M Sbjct: 265 GLAVWMPNGAAIRRTLERYIVDREVQDGYQHVYTPIMSNLNLYKQSGHWDHYRDDMFPPM 324 Query: 98 DRNDKAMI-----YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D D + P+H +M +F+ +SYR LPF ++ + R E G+ R Sbjct: 325 DMGDGEFLELRPMNCPSH--IM--VFKHKPRSYRELPFRIAELGMMHRYEKSGALTGLSR 380 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE + D ++F + P+ + + K+ + ++ + R LS+ Sbjct: 381 VREMTLNDGHTF-VMPDQIEDEFKKILGLMIDVYADFDITDYRFR---------LSYR-- 428 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDS 270 D T+ + D M + D + L+ E A Y DV ++ + Sbjct: 429 ---DPENTEKYYDDDDMWEKAQTMLKKAMDDLELDYFEAEGEAAFYGPKLDV---QIKTA 482 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVI 329 L + +S ++ F ++ + + G DG+ H M G I M A + Sbjct: 483 LGGEETLSTIQLD----FLLPERFDV----NYVGPDGELHRPVMIHRGIISTMERFTAYL 534 Query: 330 ESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 + G W +AP ++ +I N AH + +D + RL K G ++D E+ Sbjct: 535 TEMYKGAFPTW---LAPHQVRIIPVNRDAHGKFAKDLAD----RLIKQGIRAEYEDRNEK 587 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +G A P +++G + V+++ V I+ Sbjct: 588 LGYLIRDAQTSKVPYTLVIGDEEVNNNTVTIR 619 >gi|292488129|ref|YP_003531006.1| threonyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|292899340|ref|YP_003538709.1| threonyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291199188|emb|CBJ46302.1| threonyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291553553|emb|CBA20598.1| Threonyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|312172261|emb|CBX80518.1| Threonyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158] Length = 642 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 90/428 (21%), Positives = 155/428 (36%), Gaps = 56/428 (13%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + Y L + + RD +L L + + + G+ W G + +R + Sbjct: 230 AAYLLRLEEAAKRDHRKIGKQLDLYH--MQEEAPGMVFWHNDGWTIFRELEVFVRTKLKE 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW ++G +++Y + M + N + I P + IF +K Sbjct: 288 YEYQEVKGPFMMDRVLWEKTGHWENYKEAMFTTSSENREYCI-KPMNCPGHVQIFNQGLK 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F T E + N Sbjct: 347 SYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVY 405 Query: 183 RIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSEN 236 ++ G + I ++ + P IG D L D ET + + P P E Sbjct: 406 DMYSTFGFEKIVVKLSTRPEKRIGSD------ELWDRSETDLAAALKENGIPFEYQPGEG 459 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + I L D L R + G + +SL Sbjct: 460 AFYGPKIEFT--------------------LHDCLD-------RAWQCGTV---QLDFSL 489 Query: 297 P--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 P +SA++ G + M I G+M ++ + G +P +AP ++ ++N Sbjct: 490 PGRLSASYVGESNERQVPVMIHRAILGSMERFIGILTEEYAG---FFPTWLAPLQVVVMN 546 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I + ++ +L G D E+IG + L P ++ G K V Sbjct: 547 ITDGQS---EYVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEA 603 Query: 414 SKVEIKHR 421 KV ++ R Sbjct: 604 GKVAVRTR 611 >gi|126697616|ref|YP_001086513.1| prolyl-tRNA synthetase [Clostridium difficile 630] gi|255099208|ref|ZP_05328185.1| prolyl-tRNA synthetase [Clostridium difficile QCD-63q42] gi|255304991|ref|ZP_05349163.1| prolyl-tRNA synthetase [Clostridium difficile ATCC 43255] gi|122974211|sp|Q18CD7|SYP2_CLOD6 RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA ligase 2; Short=ProRS 2 gi|115249053|emb|CAJ66864.1| Prolyl-tRNA synthetase [Clostridium difficile] Length = 481 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 2/155 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF +G S+G + R++ +I + D +G+ Sbjct: 226 GKALQSGTSHFLGQHFTKAFDITFADREGNLANPYHTSWG-ASTRLIGGLIMTHSDNRGL 284 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 + P VAP ++ ++ I A + +KIYA L G V DD G +F ++ Sbjct: 285 VLPPRVAPIQVVIVPIAAKKGNVMETVDKIYADLKAKGVAVEVDDRDNYTTGWKFNEWEM 344 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G P++V +G K + +++ + R T ++ M LE Sbjct: 345 KGVPVRVEIGPKDIENNQAMVFRRDTLEKDSMPLE 379 >gi|114559279|ref|XP_001168807.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 4 [Pan troglodytes] Length = 657 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 100/434 (23%), Positives = 167/434 (38%), Gaps = 72/434 (16%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E G E+ PT Sbjct: 235 EAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPT 294 Query: 74 LQSADLWVESGRYDSYGKEMLRL----ADRNDKA------------MIYGPTHEEVMTDI 117 L S LW +SG ++ Y ++M + +DR + + P + + Sbjct: 295 LFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLM 354 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-----GSK 171 F +S+R LP R E G+ R R F DA+ F T + S Sbjct: 355 FAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSC 414 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + + + L RL L + P SG +G C D + Sbjct: 415 LDFLRSVYAVLGFSFRLALSTRP----SGFLGDP-----------------CLWDQAEQV 453 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 + +F + LNS A Y DVH L D+L R + G I Sbjct: 454 LKQALKEFGEPWDLNSGD---GAFYGPKIDVH---LHDAL-------GRPHQCGTI---Q 497 Query: 292 TKYSLPM--SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 + LP+ +KG G + V + +G++ + V+ S GK WP ++PF+ Sbjct: 498 LDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGGK---WPLWLSPFQ 554 Query: 349 ISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + +I + + ++ ++A + + A D D G + + A L + Q +VG Sbjct: 555 VVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDA---DSGLTLSRRIRRAQLAHYNFQFVVG 611 Query: 408 SKFVSDSKVEIKHR 421 K S V I+ R Sbjct: 612 QKEQSKRTVNIRTR 625 >gi|294782476|ref|ZP_06747802.1| threonine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] gi|294481117|gb|EFG28892.1| threonine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] Length = 637 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 82/414 (19%), Positives = 167/414 (40%), Gaps = 52/414 (12%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + L I ++ G +LP G + + + R+E + G +++ P Sbjct: 236 EAEKRDHRKLGKELELFFISEYGPGFPFFLPKGMVFRNVLIDLWRKEHEKAGYLQLETPI 295 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + + +LW SG + +Y +E + ++ ++ P + F+ + SY++LP Sbjct: 296 MLNKELWEISGHWFNY-RENMYTSEIDELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLA 354 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ R E G+MR R F D++ F +TP+ + + + + +L Sbjct: 355 ELGKVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEIIGVVNLIDKFYSKL---- 409 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 E+ + T + S++ D + D + I Sbjct: 410 -------------FGFEYEIELSTKPEKAIGSQEIWDMAESALAGALDKLGRKYKINPGD 456 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG 307 A Y D K+ D+ +G ++ GT ++LP T+ G DG Sbjct: 457 GAFYGPKLDF---KIKDA-------------IGRMWQCGTIQLDFNLPERFDVTYIGEDG 500 Query: 308 KDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + H V + G++ ++ + G +W +AP ++ ++ + + C + Sbjct: 501 EKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMW---LAPVQVKVLTL---NDECIPYAK 554 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIK 419 +I A+L ++G DD E IG + A+ P+Q+I+G V + +V I+ Sbjct: 555 EIMAKLQELGIRAELDDRNETIGYKIREANGRYKIPMQLIIGKNEVENKEVNIR 608 >gi|218295928|ref|ZP_03496708.1| threonyl-tRNA synthetase [Thermus aquaticus Y51MC23] gi|218243666|gb|EED10194.1| threonyl-tRNA synthetase [Thermus aquaticus Y51MC23] Length = 660 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 6/166 (3%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM-- 93 KG+ WLP G + + A +REEQ + G ++ P + S +L+ SG Y Y + Sbjct: 270 GKGLVLWLPKGNVIREELIAFMREEQIKRGYQLVTTPHIGSLELYKTSGHYPYYAESQFP 329 Query: 94 -LRLADR-NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVM 150 + +R ++ + P + I+ +SYR LP + +R E G+ Sbjct: 330 PISFKERGEEEEYLLKPMNCPHHIRIYAHKKRSYRELPLRLAEFGTVYRYEKAGELLGLT 389 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R R F DA+ F PE K + + L++F LGLK R Sbjct: 390 RVRGFTQDDAHIF-CAPEDVKGEFLGVLDLVLKVFATLGLKDFRAR 434 >gi|227327045|ref|ZP_03831069.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 642 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 85/409 (20%), Positives = 147/409 (35%), Gaps = 42/409 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + +W ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGPFMMDRVMWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + N ++ G + I ++ + P S E Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 433 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ + P E + I L D Sbjct: 434 WDRAEADLAAALTENNIEFAYQPGEGAFYGPKIEFT--------------------LHDC 473 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 L R + G + +SLP ++A++ G + M I G+M Sbjct: 474 LD-------RAWQCGTV---QLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ G +P +AP + +INI D ++ +L + G V D E+ Sbjct: 524 ILTEEFAG---FFPTWLAPVQAVIINITDSQS---DYVNELTRKLQEAGIRVKADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 IG + L P ++ G K V KV ++ R M + EVI+ Sbjct: 578 IGFKIREHTLRRVPYMLVCGDKEVETGKVAVRTRRGKDLGSMDVSEVIS 626 >gi|104781106|ref|YP_607604.1| threonyl-tRNA synthetase [Pseudomonas entomophila L48] gi|123079219|sp|Q1IC15|SYT_PSEE4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|95110093|emb|CAK14798.1| threonyl-tRNA synthetase [Pseudomonas entomophila L48] Length = 640 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 39/171 (22%), Positives = 68/171 (39%), Gaps = 3/171 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q G E+ P + LW SG + +Y + Sbjct: 255 LQEEAPGMVFWHANGWTVYQVLEQYMRQVQRENGYQEIKTPQVVDRILWERSGHWSNYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTSSENRDYAV-KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 R R F+ DA+ F T + K L ++ G + M+ + P Sbjct: 374 RVRGFVQDDAHIF-CTEDQVKKEAADFIKLTLDVYKDFGFTDVAMKLSTRP 423 >gi|86141210|ref|ZP_01059756.1| prolyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] gi|85831769|gb|EAQ50224.1| prolyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] Length = 490 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/162 (21%), Positives = 81/162 (50%), Gaps = 5/162 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F +G +V S+G+ + R++ A++ + D G+ Sbjct: 232 GKALQAGTSHFLGQNFAKAFDVKFATKEGGQEHVWATSWGV-STRLMGALVMTHSDDNGL 290 Query: 339 IWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I K +Q+ +++ L +G V +DD + G +F Sbjct: 291 VLPPKLAPIQVVIVPIYKGEEQLDSISQVAKELKRELQLLGISVKFDDRDTHKPGWKFNE 350 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +L G PL++ +G + + VE+ R T +E +S +++++ Sbjct: 351 YELKGVPLRIAIGPRDLEKRTVELARRDTLTKETVSKDDIVS 392 Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ D +R I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 114 EEELIVRPTSETIIWDTYRKWIQSYRDLPIKVNQWANVVRWEMRTRL-FLRTAEFLWQEG 172 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T + + +M Y Sbjct: 173 HTAHATKDEAIAEAEQMMRVY 193 >gi|323698513|ref|ZP_08110425.1| threonyl-tRNA synthetase [Desulfovibrio sp. ND132] gi|323458445|gb|EGB14310.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans ND132] Length = 645 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 92/394 (23%), Positives = 152/394 (38%), Gaps = 55/394 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+E + G + P + +LW +SG YD+Y +E + Sbjct: 261 GMSLWHPRGMLLRAILEDFERKEHLKRGYDLVQGPIILKRELWEKSGHYDNY-RENMYFT 319 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +++A P + I++ I SYR+LP ++++ + R E G+MR R F Sbjct: 320 EIDEQAYGIKPMNCLAHMIIYKRKIMSYRDLPQRYFELGVVHRHEKSGVLHGLMRVRTFT 379 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG------LKSIPMRAESGPIGGDLSHEF 210 DA+ P+ + + Y I+ L + P ++ IG D E Sbjct: 380 QDDAHLI-CRPDQVEEEILNLIKFYKDIYALFNYEFDVELSTRPAKS----IGTDEDWE- 433 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 LA G Q K M + I + F Y D H L DS Sbjct: 434 --LATEGLRQAL-DKSGMPYAINEGDGAF----------------YGPKIDFH---LRDS 471 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAA 327 + R + G I ++LP + G DG+ H V + +G++ Sbjct: 472 I-------GRSWQCGTI---QVDFTLPERFDIVYVGEDGERHRPVMIHRAMLGSIERFIG 521 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 V+ G +W +AP + L+N+ D +K A L G V D E+ Sbjct: 522 VLTEHCAGAYPVW---LAPVQARLLNVT---DAQLDFMKKAEAFLVSKGIRVEADTRNEK 575 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +G + A + P +++G K V V I+ R Sbjct: 576 LGYKIREAQVEKVPYMLVIGDKEVEAGCVNIRSR 609 >gi|114328278|ref|YP_745435.1| threonyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] gi|122326764|sp|Q0BRP0|SYT_GRABC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114316452|gb|ABI62512.1| threonyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] Length = 642 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 5/173 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G W G + + +R Q G E+ P L LW +SG +D Y + Sbjct: 256 IQEEAVGSIFWHKKGWRLYRALENYMRRRQIEAGYEEVRTPQLVDRSLWEDSGHWDKYRE 315 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + + +K + P + IFR ++SY+ LP + R E G+ Sbjct: 316 HMFIATVEDEEKTLALKPMNCPCHVQIFRHGLRSYKELPLRMAEFGACHRYEPSGALHGI 375 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP 201 MR R F DA+ F + + +K + + FV+ L ++ LG S ++ P Sbjct: 376 MRVRSFTQDDAHIFCMPEQIAKETAD--FVAMLASVYRDLGFDSFRVKFADRP 426 >gi|15605310|ref|NP_220096.1| threonyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX] gi|76789318|ref|YP_328404.1| threonyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|237803010|ref|YP_002888204.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] gi|237804932|ref|YP_002889086.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|255311401|ref|ZP_05353971.1| threonyl-tRNA synthetase [Chlamydia trachomatis 6276] gi|255317702|ref|ZP_05358948.1| threonyl-tRNA synthetase [Chlamydia trachomatis 6276s] gi|255348963|ref|ZP_05380970.1| threonyl-tRNA synthetase [Chlamydia trachomatis 70] gi|255503502|ref|ZP_05381892.1| threonyl-tRNA synthetase [Chlamydia trachomatis 70s] gi|7388284|sp|O84585|SYT_CHLTR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123731247|sp|Q3KLB6|SYT_CHLTA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|6578108|gb|AAC68183.2| Threonyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX] gi|76167848|gb|AAX50856.1| threonyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|231273232|emb|CAX10145.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|231274244|emb|CAX11038.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] gi|296436115|gb|ADH18289.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/9768] gi|296437044|gb|ADH19214.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/11222] gi|296437975|gb|ADH20136.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/11074] gi|297140477|gb|ADH97235.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/9301] Length = 635 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 28/204 (13%) Query: 16 RDAEIASHKLML------RTGMIHQHSKGIYSWLPLGQKALDNVNAII---REEQNRTGA 66 RD + KL L GM H +G+ W NA++ + R G Sbjct: 236 RDHRVLGTKLDLFSQQTCSAGMPFFHPRGMVVW-----------NALVDYWKRLHQRAGY 284 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 ++ P L + +LW SG +++Y + M L D D A+ P + +++ + SY Sbjct: 285 QQIQTPQLMNRELWEISGHWENYKENMYTLTVDEEDYAI--KPMNCPGCMLYYKTQLHSY 342 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R P +I R EL G+MR R F DA+ F LTPE + + + Sbjct: 343 REFPLRIAEIGHVHRHELSGALSGLMRVRTFHQDDAHVF-LTPEQVEEETLNILNLVSEL 401 Query: 185 FHRLGLK---SIPMRAESGPIGGD 205 + GL+ + R E G IG D Sbjct: 402 YGTFGLEYHLELSTRPEQGTIGSD 425 >gi|11498158|ref|NP_069384.1| threonyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304] gi|3334363|sp|O29703|SYT_ARCFU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2650076|gb|AAB90685.1| threonyl-tRNA synthetase (thrS) [Archaeoglobus fulgidus DSM 4304] Length = 619 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 75/328 (22%), Positives = 131/328 (39%), Gaps = 55/328 (16%) Query: 124 SYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +YRNLP Y++ + FR E R G+ R R F M D ++ E +K + + Sbjct: 301 TYRNLPLKIYELTRYSFRKEQRGELVGLRRLRAFTMPDMHTVAKDMEQAKEEFFNQYRLS 360 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD- 240 + + +GL+ + E V +KDF + EN +F Sbjct: 361 VEVLREIGLEP----------------------EDYEVAVRITKDFYE-----ENREFVH 393 Query: 241 ---DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 DI+ ++E W + D+L + +S I+V + +G Sbjct: 394 SLVDILKKPILIEMWDHRFFYFVLKFEFNFVDALDKASALSTVQIDVENAERYGI----- 448 Query: 298 MSATFKGADGKDH--YVQMGSYGIGAMRVVAAVIESSH----DGKGIIWPDSVAPFKISL 351 TF +DGK+ Y+ S RV+ A++E + +G+ + P ++P ++ + Sbjct: 449 ---TFVDSDGKEKHPYILHCSVSGAVERVMYALLEKAKFMLDEGRLPMLPVWLSPTQVRV 505 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 I + + DA KI +++ G V DD E +G + A P +VG K + Sbjct: 506 IPV---SERFVDAAIKIADDIARNGIRVDVDDRNETLGKKIRDAQTEWIPYIAVVGEKEI 562 Query: 412 SDSKVEIKHRLTGI-----REDMSLEEV 434 K+ + R R +MS EE+ Sbjct: 563 ESGKLAVTVRAESTQKEQKRVEMSAEEL 590 >gi|271500480|ref|YP_003333505.1| threonyl-tRNA synthetase [Dickeya dadantii Ech586] gi|270344035|gb|ACZ76800.1| threonyl-tRNA synthetase [Dickeya dadantii Ech586] Length = 642 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 89/413 (21%), Positives = 152/413 (36%), Gaps = 50/413 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + + P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCV-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 D D D ++ N+I ++ A E Sbjct: 432 ------------------DMWD----RAEEDLAAALTENAIPFEYQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L D L R + G + +SLP +SA++ G + + M I G+M Sbjct: 470 LHDCLD-------RAWQCGTV---QLDFSLPGRLSASYVGENNERQVPVMIHRAILGSME 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +P +AP + ++NI D ++ +L G V D Sbjct: 520 RFIGILTEEFAG---FFPTWLAPVQAVVMNITDSQS---DYVSELTRKLQDAGIRVKADL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 574 RNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVSEVIT 626 >gi|134045917|ref|YP_001097403.1| prolyl-tRNA synthetase [Methanococcus maripaludis C5] gi|172044143|sp|A4FYA4|SYP_METM5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|132663542|gb|ABO35188.1| prolyl-tRNA synthetase [Methanococcus maripaludis C5] Length = 460 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 4/148 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++G + G ++ F+ DG+ +V YGI R +A++I D KG+ Sbjct: 212 GKTMQIGTVHNLGQNFAKTFELEFETPDGEKDFVYQTCYGISD-RAIASLISVHGDEKGL 270 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P VAP +I LI + K +++ D +++ L K V DD + G ++ + Sbjct: 271 VIPVDVAPIQIVLIPLLFKGKEEIVMDKIKELNNTL-KSEFRVHLDDRDIRPGRKYNDWE 329 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + G PL++ +G + + + + I R TG Sbjct: 330 IKGVPLRIELGPRDIENGQALIVRRDTG 357 Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust. Identities = 51/221 (23%), Positives = 82/221 (37%), Gaps = 18/221 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG +LP G K I+R+ + T E P L +L + G + ++ + Sbjct: 24 KGCGVYLPYGFKIRRYSFEILRKLLDETNHDETLFPMLIPENLLAKEGEHIKGFEDEVFW 83 Query: 97 ADRNDKA-----MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 K + PT E M + + IK + +LP YQ+ FR E + ++R Sbjct: 84 VTHGGKTPLEVKLALRPTSETTMYYMMKQWIKVHTDLPMKLYQVVNTFRYETKHTRPLIR 143 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS-IPMRAESGPI-GGDLSH 208 RE + K+A++ T E + Y F + + I R E G D + Sbjct: 144 LREIMSFKEAHTAHATKEDCDAQITEALNLYGEFFDEICVPYIISKRPEWDKFPGADYTM 203 Query: 209 EFIVLADTGET----------QVFCSKDFMDFPIPSENTDF 239 F + G+T Q F ++F P DF Sbjct: 204 AFDTIYPDGKTMQIGTVHNLGQNFAKTFELEFETPDGEKDF 244 >gi|114559283|ref|XP_001168777.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 3 [Pan troglodytes] Length = 666 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 100/434 (23%), Positives = 167/434 (38%), Gaps = 72/434 (16%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E G E+ PT Sbjct: 244 EAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPT 303 Query: 74 LQSADLWVESGRYDSYGKEMLRL----ADRNDKA------------MIYGPTHEEVMTDI 117 L S LW +SG ++ Y ++M + +DR + + P + + Sbjct: 304 LFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLM 363 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-----GSK 171 F +S+R LP R E G+ R R F DA+ F T + S Sbjct: 364 FAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSC 423 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + + + L RL L + P SG +G C D + Sbjct: 424 LDFLRSVYAVLGFSFRLALSTRP----SGFLGDP-----------------CLWDQAEQV 462 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 + +F + LNS A Y DVH L D+L R + G I Sbjct: 463 LKQALKEFGEPWDLNSGD---GAFYGPKIDVH---LHDAL-------GRPHQCGTI---Q 506 Query: 292 TKYSLPM--SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 + LP+ +KG G + V + +G++ + V+ S GK WP ++PF+ Sbjct: 507 LDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGGK---WPLWLSPFQ 563 Query: 349 ISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + +I + + ++ ++A + + A D D G + + A L + Q +VG Sbjct: 564 VVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDA---DSGLTLSRRIRRAQLAHYNFQFVVG 620 Query: 408 SKFVSDSKVEIKHR 421 K S V I+ R Sbjct: 621 QKEQSKRTVNIRTR 634 >gi|149200873|ref|ZP_01877848.1| threonyl-tRNA synthetase [Roseovarius sp. TM1035] gi|149145206|gb|EDM33232.1| threonyl-tRNA synthetase [Roseovarius sp. TM1035] Length = 648 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 9/168 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q R G +E++ P + LW SG ++ Y + Sbjct: 260 MQEEAPGQVFWHPNGWTVYTTLQDYMRRQQRRGGYVEVNTPQVVDRKLWERSGHWEKYQE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + D A P + IF +KSYR+LP + R E Sbjct: 320 NMFIVEVDEDHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKS 192 G+MR R F DA+ F E S F+++L I+ LG + Sbjct: 380 LHGIMRVRGFTQDDAHIF--CTEDQIESETARFITFLSGIYTDLGFPN 425 >gi|302336805|ref|YP_003802011.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] gi|301633990|gb|ADK79417.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] Length = 476 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 11/161 (6%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ TF+ G YV S+G+ + R+V A+I + D KG++ Sbjct: 220 KALQAGTSHFLGQNFAKAFDVTFQNDTGSLEYVWATSWGV-STRLVGALIMTHSDDKGLV 278 Query: 340 WPDSVAPFKISLINI---KAHDQVCRDACEKIYARLS---KVGCDVFWDDMGEQIGSQFA 393 P ++P + +I I K ++V A K+Y R+ +V D D G +FA Sbjct: 279 VPPKLSPVEAVIIPIFRNKNKEEVVGYA-RKLYDRMKDEFRVKLDA---DDSNSPGWKFA 334 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 ++LG P+++ +G + + + K + R G +E + +E V Sbjct: 335 EWEMLGCPVRIELGPRDMENGKAVLVRRDNGEKEIVDIEAV 375 Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust. Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ +++ I+SYR+LP Q R E R R +R+ EFL ++ Sbjct: 101 EEPLVIRPTSETIIWSMYKKWIQSYRDLPLLINQWANVLRWEKRTRL-FLRTSEFLWQEG 159 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T + ++ +M Y Sbjct: 160 HTAHATEKEAREETLRMLNVY 180 >gi|153816280|ref|ZP_01968948.1| hypothetical protein RUMTOR_02529 [Ruminococcus torques ATCC 27756] gi|317502163|ref|ZP_07960339.1| proline-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|331088732|ref|ZP_08337642.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] gi|145846463|gb|EDK23381.1| hypothetical protein RUMTOR_02529 [Ruminococcus torques ATCC 27756] gi|316896439|gb|EFV18534.1| proline-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|330407255|gb|EGG86758.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] Length = 480 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 34/148 (22%), Positives = 72/148 (48%), Gaps = 1/148 (0%) Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 +FG + + + + H V S+G+ + R++ A+I D G++ P +AP + Sbjct: 235 FFGNSFPDAFDIKYADKNNELHSVYETSWGL-STRIIGAIIMVHGDDSGLVLPPRIAPVQ 293 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 +I I H + D ++ L+K G DD + G +F+ ++LG P ++ +G Sbjct: 294 TRVIPIAQHKEGVLDKANELLDALNKAGYRAKIDDSEKSPGWKFSEQEMLGIPTRIEIGP 353 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVIN 436 K + + +V + R T + ++++E+ Sbjct: 354 KDIENGQVVVVRRDTREKIVVAIDEITT 381 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 10/152 (6%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG ++LP G +N+ + + + TG + +P L + L E + + E+ Sbjct: 38 KGCLNYLPNGYAIWENIQSDLDKRFKDTGVENVYLPVLIPESLLQKEKDHIEGFAPEVAW 97 Query: 96 L----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + A+ + PT E + D++ ++SYR+LP + Q L++ RP Sbjct: 98 VTHGGAEPLQERFCIRPTSETLFCDVWSKTVQSYRDLPKVWNQWCSVLRWEKTTRP---F 154 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +RSREFL ++ ++ T E ++ M+ Y Sbjct: 155 LRSREFLWQEGHTIHATYEEAEERTKLMWKVY 186 >gi|114559277|ref|XP_001168750.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 2 [Pan troglodytes] Length = 635 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 100/434 (23%), Positives = 167/434 (38%), Gaps = 72/434 (16%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E G E+ PT Sbjct: 213 EAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPT 272 Query: 74 LQSADLWVESGRYDSYGKEMLRL----ADRNDKA------------MIYGPTHEEVMTDI 117 L S LW +SG ++ Y ++M + +DR + + P + + Sbjct: 273 LFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLM 332 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-----GSK 171 F +S+R LP R E G+ R R F DA+ F T + S Sbjct: 333 FAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSC 392 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + + + L RL L + P SG +G C D + Sbjct: 393 LDFLRSVYAVLGFSFRLALSTRP----SGFLGDP-----------------CLWDQAEQV 431 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 + +F + LNS A Y DVH L D+L R + G I Sbjct: 432 LKQALKEFGEPWDLNSGD---GAFYGPKIDVH---LHDAL-------GRPHQCGTI---Q 475 Query: 292 TKYSLPM--SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 + LP+ +KG G + V + +G++ + V+ S GK WP ++PF+ Sbjct: 476 LDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGGK---WPLWLSPFQ 532 Query: 349 ISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + +I + + ++ ++A + + A D D G + + A L + Q +VG Sbjct: 533 VVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDA---DSGLTLSRRIRRAQLAHYNFQFVVG 589 Query: 408 SKFVSDSKVEIKHR 421 K S V I+ R Sbjct: 590 QKEQSKRTVNIRTR 603 >gi|330685703|gb|EGG97342.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU121] Length = 523 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 87/409 (21%), Positives = 170/409 (41%), Gaps = 49/409 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + I +++ G + P L + DL+ SG +D Y ++M + Sbjct: 140 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPM 199 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 +L + + M+ P + ++ + SYR LP ++ R E G+ R R Sbjct: 200 KLDETEE--MVLRPMNCPHHMMVYNNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVR 257 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 + D++ F + P+ K + ++ ++ G + R + Sbjct: 258 GMTLNDSHIF-VRPDQIKEEFKRVVNMIQDVYKDFGFEDYRFR--------------LSY 302 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLN---SIVEQWTAPYAATSDVHNEKLFDS 270 D + + + D M + + D + L+ +I E A Y DV ++ + Sbjct: 303 RDPEDKEKYFDDDEMWNKAENMIKEAADELGLSYEEAIGE--AAFYGPKLDV---QVKTA 357 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAV 328 + + + +S ++ F ++ L T+ G DG+ H + G+ + R VA + Sbjct: 358 MGKEETLSTAQLD----FLLPERFEL----TYIGQDGEHHRPVVIHRGVVSTMERFVAFL 409 Query: 329 IESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 E + KG +P +AP ++ +I N+ H D + I L G V DD E Sbjct: 410 TEET---KG-AFPTWLAPKQVEIIPVNLDLH----YDYAKSIQDELKSQGVRVEIDDRNE 461 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++G + A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 462 KMGYKIREAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETLEKDEFI 510 >gi|269860011|ref|XP_002649729.1| threonyl-tRNA synthetase [Enterocytozoon bieneusi H348] gi|263511674|sp|B7XIA1|SYTC_ENTBH RecName: Full=Probable threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|220066924|gb|EED44394.1| threonyl-tRNA synthetase [Enterocytozoon bieneusi H348] Length = 634 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 7/164 (4%) Query: 4 SKYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +K L +E + A+ H+ + L H++S G WLP G + + +R+E Sbjct: 220 NKTLLKEYEEKVQKAKEMDHRKIGKELNLYFFHEYSPGSCFWLPDGVVIYNRLMEFLRKE 279 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + DLW ESG Y +Y KE + D A+ P + IF+S Sbjct: 280 YIKRGFKEVITPNIFHIDLWKESGHYQNY-KENIYGISGEDFAL--KPMNCPGHCIIFKS 336 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 +SY+ LP + + R+E G+ R R F DA+ F Sbjct: 337 VERSYKELPLRYADFGVLHRNECSGSLTGLTRVRRFQQDDAHIF 380 >gi|15828654|ref|NP_326014.1| prolyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP] gi|14089596|emb|CAC13356.1| PROLYL-TRNA SYNTHETASE (PROLINE--TRNA LIGASE) [Mycoplasma pulmonis] Length = 501 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 9/161 (5%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y +S FK ++ K +V S+G+ + R++ A+I + D +GI Sbjct: 246 GKALQSGTTHYLAQNFSEAYDVNFKDSENKKQFVYQTSWGL-STRLIGAIIMTHGDNRGI 304 Query: 339 IWPDSVAPFKISLINIK----AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 I P VAP +I ++ A + + EKI + +V D + +G + + Sbjct: 305 IIPPFVAPCQIDILAFNPRRSAEIEKFVNQVEKILKKPFRVNV----DRSDKTLGFKASQ 360 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +++ G PL++ +G + +++V + R T ++ +S+ +++ Sbjct: 361 SEIQGVPLRIEIGPRDFENNQVTLVRRDTLEKQSVSINDIV 401 >gi|166154796|ref|YP_001654914.1| threonyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|166155671|ref|YP_001653926.1| threonyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336072|ref|ZP_07224316.1| threonyl-tRNA synthetase [Chlamydia trachomatis L2tet1] gi|238687393|sp|B0B8F5|SYT_CHLT2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238687442|sp|B0BA34|SYT_CHLTB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|165930784|emb|CAP04281.1| threonyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|165931659|emb|CAP07235.1| threonyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 635 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 22/184 (11%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAII---REEQNRTGAIEMSVPTLQSADLWVESGRY 86 GM H +G+ W NA++ + R G ++ P L + +LW SG + Sbjct: 256 GMPFFHPRGMVVW-----------NALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHW 304 Query: 87 DSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++Y + M L D D A+ P + +++ + SYR P +I R EL Sbjct: 305 ENYKENMYTLTVDEEDYAI--KPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELSG 362 Query: 146 RF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGP 201 G+MR R F DA+ F LTPE + + ++ GL+ + R E G Sbjct: 363 ALSGLMRVRTFHQDDAHVF-LTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQGT 421 Query: 202 IGGD 205 IG D Sbjct: 422 IGSD 425 >gi|126465876|ref|YP_001040985.1| threonyl-tRNA synthetase [Staphylothermus marinus F1] gi|166225505|sp|A3DN67|SYT_STAMF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|126014699|gb|ABN70077.1| threonyl-tRNA synthetase [Staphylothermus marinus F1] Length = 614 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 77/366 (21%), Positives = 151/366 (41%), Gaps = 51/366 (13%) Query: 89 YGKEMLRLADRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 +G + L N+K ++ Y H++ + R I SY+NLPF +++ +R E R Sbjct: 268 FGDRLYELKVDNEKFVLRYAACHQQFA--MLRDWIISYKNLPFGMFEVADSYRLEQRGEL 325 Query: 148 GV-MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 + R R+F M D H N+ ++I + K + A+ G Sbjct: 326 NLCFRLRKFYMPDL-----------HILNRDLNEAIKISRIVQDKILEEIAKIG------ 368 Query: 207 SHEFIVLADTGETQVFCSKDFMD--FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 +++ L + + DF D I E ++ L S++ + + H Sbjct: 369 -RKYVALYN-------VTSDFFDKYRDILIEFVRRENYPVLVSVIPSGIYYWVLNVEYH- 419 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI--GAM 322 + D+L + ++ I++G+ G ++++ T+ G+ H+ + I G Sbjct: 420 --IIDNLNRPREIATFQIDIGN----GERFNI----TYTDEKGEKHHPVIIHTAIIGGIE 469 Query: 323 RVVAAVIESS----HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 R + + +++ +GK P +AP ++ +I IK D EK+ ++ G Sbjct: 470 RFIYTIFDTAALMEKEGKTPYIPTWLAPVQVRIIPIKNE---YLDYAEKVAEKIENAGFR 526 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD GE +G + A P V++G + V + + ++ R T ++ M +E+I Sbjct: 527 VDIDDRGESLGKKIRDAGREWIPYIVVIGEREVRSNTINVRIRRTNDQKVMVTDELIRIL 586 Query: 439 SHRFSN 444 N Sbjct: 587 EEETKN 592 >gi|255507180|ref|ZP_05382819.1| threonyl-tRNA synthetase [Chlamydia trachomatis D(s)2923] gi|289525626|emb|CBJ15104.1| threonyl-tRNA synthetase [Chlamydia trachomatis Sweden2] gi|296435188|gb|ADH17366.1| threonyl-tRNA synthetase [Chlamydia trachomatis E/150] gi|296438907|gb|ADH21060.1| threonyl-tRNA synthetase [Chlamydia trachomatis E/11023] Length = 635 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 22/184 (11%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAII---REEQNRTGAIEMSVPTLQSADLWVESGRY 86 GM H +G+ W NA++ + R G ++ P L + +LW SG + Sbjct: 256 GMPFFHPRGMVVW-----------NALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHW 304 Query: 87 DSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++Y + M L D D A+ P + +++ + SYR P +I R EL Sbjct: 305 ENYKENMYTLTVDEEDYAI--KPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELSG 362 Query: 146 RF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGP 201 G+MR R F DA+ F LTPE + + ++ GL+ + R E G Sbjct: 363 ALSGLMRVRTFHQDDAHVF-LTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQGT 421 Query: 202 IGGD 205 IG D Sbjct: 422 IGSD 425 >gi|114152217|sp|Q98R27|SYP_MYCPU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 476 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 9/161 (5%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y +S FK ++ K +V S+G+ + R++ A+I + D +GI Sbjct: 221 GKALQSGTTHYLAQNFSEAYDVNFKDSENKKQFVYQTSWGL-STRLIGAIIMTHGDNRGI 279 Query: 339 IWPDSVAPFKISLINIK----AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 I P VAP +I ++ A + + EKI + +V D + +G + + Sbjct: 280 IIPPFVAPCQIDILAFNPRRSAEIEKFVNQVEKILKKPFRVNV----DRSDKTLGFKASQ 335 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +++ G PL++ +G + +++V + R T ++ +S+ +++ Sbjct: 336 SEIQGVPLRIEIGPRDFENNQVTLVRRDTLEKQSVSINDIV 376 >gi|226944147|ref|YP_002799220.1| threonyl-tRNA synthetase [Azotobacter vinelandii DJ] gi|259516344|sp|C1DF42|SYT_AZOVD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226719074|gb|ACO78245.1| threonyl-tRNA synthetase [Azotobacter vinelandii DJ] Length = 640 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 8/190 (4%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL R + H + + G+ W P G + +R Q G +E+ P Sbjct: 237 EAEKRDHRKLGKRLDLFHTQEEAPGMVFWHPNGWTVYQVLEQYMRAVQRENGYLEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y + M + I P + ++ +KSYR LP Sbjct: 297 VVDRVLWEKSGHWANYAENMFTTESESRDYAI-KPMNCPCHVQVYNQGLKSYRELPLRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ R ++ G + Sbjct: 356 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEEQMQAESAAFIKLTRQVYADFGFQ 413 Query: 192 SIPMRAESGP 201 I ++ + P Sbjct: 414 DIQLKLSTRP 423 >gi|225548931|ref|ZP_03769908.1| threonyl-tRNA synthetase [Borrelia burgdorferi 94a] gi|225370534|gb|EEG99970.1| threonyl-tRNA synthetase [Borrelia burgdorferi 94a] Length = 581 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 78/409 (19%), Positives = 158/409 (38%), Gaps = 51/409 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG D Y M Sbjct: 205 GLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 265 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGMMRARGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHE--FI 211 DA+ T ++ + ++ + G + + P +G D E Sbjct: 325 QDDAHII-CTHSQVLDEIKEVLRFAIYMWSKFGFSNPKAYLSTKPDKSVGNDYDWEMSLK 383 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 VL +T DF +P E I + A Y D+ K+ DSL Sbjct: 384 VLEET----------LSDFEVPYE------------IDKGGGAFYGPKIDL---KIVDSL 418 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAV 328 ++S + ++LP + T+ DGK+ M +G++ + Sbjct: 419 EREWQMSTIQFD----------FNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGI 468 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G +W ++P ++ +I + + + D K++ + G + D+ ++ Sbjct: 469 LVEHYGGAFPLW---LSPVQVVIIPV---NNIVEDYAIKVFNKFKNEGIRIKLDNSSSRM 522 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ P I+G + ++ ++ I+ R M L+E + + Sbjct: 523 NAKIREYQAKKIPYMFIIGEREATEERISIRTRTNEQINGMKLDEALKF 571 >gi|149276293|ref|ZP_01882437.1| threonine--tRNA ligase (threonine tRNA synthetase) [Pedobacter sp. BAL39] gi|149232813|gb|EDM38188.1| threonine--tRNA ligase (threonine tRNA synthetase) [Pedobacter sp. BAL39] Length = 641 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 4/156 (2%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-- 95 G+ WLP G + + + Q ++G ++ P + +L++ SG Y+ YGK+ + Sbjct: 262 GLPLWLPKGAALRERLVQFLTRAQAKSGYEQVVTPHIGHKNLYITSGHYEKYGKDSFQPI 321 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + P + +I++ +SY++LP F + +R E G+ R R Sbjct: 322 KTPQEGEEFFLKPMNCPHHCEIYKVKPRSYKDLPLRFAEFGTVYRYEQSGELHGLTRVRG 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F DA+ F P+ K + K+ L +F LG Sbjct: 382 FTQDDAHLF-CRPDQVKEEFKKVIDLVLYVFKSLGF 416 >gi|170759289|ref|YP_001788660.1| prolyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|259511588|sp|B1L224|SYP_CLOBM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169406278|gb|ACA54689.1| proline--tRNA ligase [Clostridium botulinum A3 str. Loch Maree] Length = 478 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 67/357 (18%), Positives = 139/357 (38%), Gaps = 77/357 (21%) Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--L 137 WV G D LA+R + PT E + + + ++SY++LP + Q + Sbjct: 97 WVTHGGDDE-------LAER----LCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVV 145 Query: 138 KFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 ++ RP +R+ EFL ++ ++ T E ++ K+ Y R+ Sbjct: 146 RWEKTTRP---FLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCE----------- 191 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 D+ +V+ E + F D D ++ S++ Sbjct: 192 -------DMLAMPVVMGKKTEKEKFAGAD--------------DTYTIESLMH------- 223 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 + ++ G Y G +S + F +GK Y ++ Sbjct: 224 --------------------DGKALQAGTSHYLGQNFSKAFAIQFSDRNGKLEYPHYTTW 263 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 + R++ A+I D G+ P +AP + +I + H + + +++ +L+KV Sbjct: 264 AV-TTRLIGAIIMVHGDDSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAKELKEKLAKV-V 321 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V DD + G +++ ++ G PL++ +G K + ++ + R + +SL+E+ Sbjct: 322 RVKLDDSDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEI 378 >gi|164657235|ref|XP_001729744.1| hypothetical protein MGL_3288 [Malassezia globosa CBS 7966] gi|159103637|gb|EDP42530.1| hypothetical protein MGL_3288 [Malassezia globosa CBS 7966] Length = 635 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M H S G WLP G + + + I+ E + G E+ P + ++ LW SG + +Y Sbjct: 236 MFHDLSPGSCFWLPHGARIYNTLQDFIKSEYRKRGFDEVISPNMYNSKLWETSGHWANYK 295 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +M L+ + + P + +F S +SY+ LP F + R+E G+ Sbjct: 296 DDMFVLS-VDKETFALKPMNCPGHCLMFASRDRSYKELPLRFADFGVIHRNEASGALSGL 354 Query: 150 MRSREFLMKDAYSF 163 R R F+ DA+ F Sbjct: 355 TRVRRFVQDDAHIF 368 >gi|167836852|ref|ZP_02463735.1| threonyl-tRNA synthetase [Burkholderia thailandensis MSMB43] Length = 635 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 8/136 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + S G+ W P G V +R + G +E+ P + LW SG + +Y + Sbjct: 255 LQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSF 163 G+MR R F+ DA+ F Sbjct: 371 GLMRVRGFVQDDAHIF 386 >gi|121610033|ref|YP_997840.1| threonyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] gi|166225514|sp|A1WMG5|SYT_VEREI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|121554673|gb|ABM58822.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] Length = 639 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 4/134 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I +HS G W P G V +R G E+ P + LW ++G +D Y + Sbjct: 255 IDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQILDQGLWEKTGHWDKYRE 314 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + +++ D A+ P + IF+ IKSYR+LP F + R+E G+ Sbjct: 315 NMFVTESEKRDYAL--KPMNCPGHIIIFKQGIKSYRDLPLRFGEFGQCHRNEPSGGLHGI 372 Query: 150 MRSREFLMKDAYSF 163 MR R F D + F Sbjct: 373 MRVRAFTQDDGHIF 386 >gi|42781481|ref|NP_978728.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|42737404|gb|AAS41336.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987] Length = 640 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + +LW +SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYKYQEVRTPFMMNQELWEKSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|53719558|ref|YP_108544.1| threonyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|53725296|ref|YP_102787.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|76810857|ref|YP_333290.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121600801|ref|YP_992866.1| threonyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124385818|ref|YP_001026205.1| threonyl-tRNA synthetase [Burkholderia mallei NCTC 10229] gi|126441516|ref|YP_001058752.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 668] gi|126449349|ref|YP_001080524.1| threonyl-tRNA synthetase [Burkholderia mallei NCTC 10247] gi|126453502|ref|YP_001066005.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|134282197|ref|ZP_01768902.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|167003090|ref|ZP_02268880.1| threonine--tRNA ligase [Burkholderia mallei PRL-20] gi|167719848|ref|ZP_02403084.1| threonyl-tRNA synthetase [Burkholderia pseudomallei DM98] gi|167738851|ref|ZP_02411625.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 14] gi|167816071|ref|ZP_02447751.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 91] gi|167824445|ref|ZP_02455916.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 9] gi|167845979|ref|ZP_02471487.1| threonyl-tRNA synthetase [Burkholderia pseudomallei B7210] gi|167894556|ref|ZP_02481958.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 7894] gi|167902959|ref|ZP_02490164.1| threonyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177] gi|167911196|ref|ZP_02498287.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 112] gi|167919220|ref|ZP_02506311.1| threonyl-tRNA synthetase [Burkholderia pseudomallei BCC215] gi|217423341|ref|ZP_03454842.1| threonine--tRNA ligase [Burkholderia pseudomallei 576] gi|226199711|ref|ZP_03795264.1| threonine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|237812016|ref|YP_002896467.1| threonine--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|238562605|ref|ZP_04610138.1| threonine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|242317788|ref|ZP_04816804.1| threonine--tRNA ligase [Burkholderia pseudomallei 1106b] gi|254177492|ref|ZP_04884147.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|254180004|ref|ZP_04886603.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|254188582|ref|ZP_04895093.1| threonyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|254197889|ref|ZP_04904311.1| threonyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|254199739|ref|ZP_04906105.1| threonyl-tRNA synthetase [Burkholderia mallei FMH] gi|254206061|ref|ZP_04912413.1| threonyl-tRNA synthetase [Burkholderia mallei JHU] gi|254259413|ref|ZP_04950467.1| threonine--tRNA ligase [Burkholderia pseudomallei 1710a] gi|254297839|ref|ZP_04965292.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|254358432|ref|ZP_04974705.1| threonyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|73919776|sp|Q62KI2|SYT_BURMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73919777|sp|Q63TM2|SYT_BURPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123771913|sp|Q3JT13|SYT_BURP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223324|sp|A3MJT8|SYT_BURM7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223325|sp|A2S2N6|SYT_BURM9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223326|sp|A1V3R3|SYT_BURMS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223327|sp|A3NUI4|SYT_BURP0 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223328|sp|A3N8T1|SYT_BURP6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|52209972|emb|CAH35944.1| threonyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|52428719|gb|AAU49312.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|76580310|gb|ABA49785.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121229611|gb|ABM52129.1| threonyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124293838|gb|ABN03107.1| threonine--tRNA ligase [Burkholderia mallei NCTC 10229] gi|126221009|gb|ABN84515.1| threonine--tRNA ligase [Burkholderia pseudomallei 668] gi|126227144|gb|ABN90684.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|126242219|gb|ABO05312.1| threonine--tRNA ligase [Burkholderia mallei NCTC 10247] gi|134246235|gb|EBA46324.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|147749335|gb|EDK56409.1| threonyl-tRNA synthetase [Burkholderia mallei FMH] gi|147753504|gb|EDK60569.1| threonyl-tRNA synthetase [Burkholderia mallei JHU] gi|148027559|gb|EDK85580.1| threonyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|157806992|gb|EDO84162.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|157936261|gb|EDO91931.1| threonyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|160698531|gb|EDP88501.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|169654630|gb|EDS87323.1| threonyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|184210544|gb|EDU07587.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|217393199|gb|EEC33220.1| threonine--tRNA ligase [Burkholderia pseudomallei 576] gi|225928297|gb|EEH24331.1| threonine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|237505158|gb|ACQ97476.1| threonine--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|238522290|gb|EEP85735.1| threonine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|242141027|gb|EES27429.1| threonine--tRNA ligase [Burkholderia pseudomallei 1106b] gi|243061341|gb|EES43527.1| threonine--tRNA ligase [Burkholderia mallei PRL-20] gi|254218102|gb|EET07486.1| threonine--tRNA ligase [Burkholderia pseudomallei 1710a] Length = 635 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 8/136 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G+ W P G V +R + G +E+ P + LW SG + +Y + Sbjct: 255 IQEEAPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHWQNYRE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 370 Query: 148 GVMRSREFLMKDAYSF 163 G+MR R F+ DA+ F Sbjct: 371 GLMRVRGFVQDDAHIF 386 >gi|114769524|ref|ZP_01447150.1| threonyl-tRNA synthetase [alpha proteobacterium HTCC2255] gi|114550441|gb|EAU53322.1| threonyl-tRNA synthetase [alpha proteobacterium HTCC2255] Length = 649 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 9/177 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G K + +R Q++ G +E++ P + LW SG ++ Y + Sbjct: 260 MQEEAPGQIFWHPNGWKIYTALQDYMRRMQDKNGYVEVNTPQVVDRKLWEASGHWEKYQE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + D A P + IF +KSYR+LP + R E Sbjct: 320 NMFIVEVDEDHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP 201 G+MR R F D + F E S K+++ +L ++ LG ++ P Sbjct: 380 LHGIMRVRGFTQDDGHIF--CSEEQIESETKIYIDFLSNVYKDLGFNEFKVKFSDRP 434 >gi|319408458|emb|CBI82113.1| Threonyl-tRNA synthetase [Bartonella schoenbuchensis R1] Length = 659 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 100/454 (22%), Positives = 177/454 (38%), Gaps = 59/454 (12%) Query: 5 KYFLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L L+E AE H+ + R + H + S G+ W P G K N+ + +R Sbjct: 233 KAYLHTLEE----AEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRL 288 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL---ADRNDKAMIYG--PTHEEVMTD 116 + E++ P + LW SG + Y + M + AD D IY P + Sbjct: 289 DDHKYDEVNAPQVLDKSLWEISGHWGWYKENMFQTTPAADDWDDQCIYALKPMNCPGHVQ 348 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IF+ +KSYR+LP + + R E G+MR R F DA+ F + + N Sbjct: 349 IFKHGLKSYRDLPIRLAEFGIVHRYEPSGSLHGLMRVRSFTQDDAHIFCTDEQLADECLN 408 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + G + I ++ + P +G D E C Sbjct: 409 -INDLILSTYADFGFEEISLKFSTRPEKRVGSD------------ELWDHCE-------- 447 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 D ++S+ +E+ + TS + E F P+ + I G + GT Sbjct: 448 -------DIMLSVLKTIEKKSEGRIKTSILPGEGAFYG-PKFEYTLKDAI--GREWQCGT 497 Query: 293 K---YSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 ++LP A + D K V + +G+M ++ + G +W +AP Sbjct: 498 TQVDFNLPERFGAFYIDKDSEKRQPVMIHRAILGSMERFLGILIENFSGHMPLW---LAP 554 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 ++ + I + + EKI +L +G D E+I + L P+ ++ Sbjct: 555 QQVVVAPITSE---ANEYAEKITKKLKAIGLSATADLRNEKINYKIREHSLQKVPVILVC 611 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G + + V ++ + + +S+EEV+ S+ Sbjct: 612 GKRESETNSVSMRRLGSTDQTVLSIEEVMKQLSN 645 >gi|238895235|ref|YP_002919970.1| threonyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044] gi|238547552|dbj|BAH63903.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 642 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 85/411 (20%), Positives = 153/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N ++ G + I ++ + P IG D + Sbjct: 375 RVRGFTQDDAHIF-CTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 D E + + + + P + + A Y + L Sbjct: 434 ------WDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G + + M I G++ Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPQRLSASYVGENNERQVPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWIAPVQVVVMNITDSQA---EYVNELTRKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVNEVI 625 >gi|152970729|ref|YP_001335838.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330009686|ref|ZP_08306560.1| threonine--tRNA ligase [Klebsiella sp. MS 92-3] gi|150955578|gb|ABR77608.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328534774|gb|EGF61330.1| threonine--tRNA ligase [Klebsiella sp. MS 92-3] Length = 622 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 85/411 (20%), Positives = 153/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N ++ G + I ++ + P IG D + Sbjct: 355 RVRGFTQDDAHIF-CTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 413 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 D E + + + + P + + A Y + L Sbjct: 414 ------WDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G + + M I G++ Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPQRLSASYVGENNERQVPVMIHRAILGSLER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 501 FIGILTEEFAG---FFPTWIAPVQVVVMNITDSQA---EYVNELTRKLQNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVNEVI 605 >gi|226310645|ref|YP_002770539.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] gi|226093593|dbj|BAH42035.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] Length = 488 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 5/159 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G K++ F D + YV S+G + R++ ++I D +G+ Sbjct: 225 GKAVQAGTSHYLGDKFARGFEIKFLDRDNQFKYVHTTSWGT-STRLIGSMIMVHGDDRGL 283 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 + P +AP ++ +I + K ++V +A + ++ + G V D E G +F Sbjct: 284 VLPPRMAPTQVIMIPVGPMKLREKVM-EAFDPLFDEIKAAGVRVRADLREETPGWKFNEW 342 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 ++ G PL++ +G + V + +V + R TG + +SLE + Sbjct: 343 EMRGVPLRLELGPRDVENGQVILARRDTGEKVTVSLEGI 381 >gi|323526736|ref|YP_004228889.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1001] gi|323383738|gb|ADX55829.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1001] Length = 635 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 15/164 (9%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + + H S G+ W P G V +R N Sbjct: 231 YLHMLEE----AEKRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAM--IYGPTHEEVMTDIFRS 120 G +E+ P + LW SG + +Y + M +++ D A+ + P H +F Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGH----VQVFNH 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 ++SYR+LP + + R+E G+MR R F+ DA+ F Sbjct: 343 GLRSYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIF 386 >gi|153824261|ref|ZP_01976928.1| threonyl-tRNA synthetase [Vibrio cholerae B33] gi|126518216|gb|EAZ75441.1| threonyl-tRNA synthetase [Vibrio cholerae B33] Length = 345 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 12/205 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR++ N G E+ P + LW SG +D Y Sbjct: 143 MQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 202 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 203 AMFTTSSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 261 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 262 RVRGFTQDDAHIF-CTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTRPEKRVGSD-- 318 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI 232 + D E + S MD P Sbjct: 319 ----EIWDKSEQALIDSLKAMDIPF 339 >gi|88810665|ref|ZP_01125922.1| threonyl-tRNA synthetase [Nitrococcus mobilis Nb-231] gi|88792295|gb|EAR23405.1| threonyl-tRNA synthetase [Nitrococcus mobilis Nb-231] Length = 641 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 90/410 (21%), Positives = 152/410 (37%), Gaps = 74/410 (18%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + + +R + + G E+ P L LW SG + + Sbjct: 255 LQEEAPGMVFWHPNGWRVYLLLQDYLRAKLDAHGYREVRTPELVDRSLWERSGHWQKFRA 314 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +M +++ D A+ P + IF +KSYR+LP + R+E G+ Sbjct: 315 DMFTTESEKRDYAV--KPMNCPCHVQIFNQGLKSYRDLPLRLAEFGNCHRNEASGTLHGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDL 206 MR R F+ DA+ F T E + ++ G + + + P +G D Sbjct: 373 MRVRNFVQDDAHIF-CTEEQIQSEVAGFLDLAEAVYRDFGFDEVIVALSTRPEQRVGAD- 430 Query: 207 SHEFIVLADTGET---QVFCSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDV 262 L D E Q ++ +D+ + P E + I L+ Sbjct: 431 -----ALWDKAEQALDQALRARR-LDWEVKPGEGAFYGPKIELS---------------- 468 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKD------HY 311 + DSL G ++ GT +S+P + A + DG H Sbjct: 469 ----MKDSL-------------GRVWQCGTMQVDFSMPQRLGAQYVAEDGARLVPVMLHR 511 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 GS+ R + +IE G WP +AP + ++NI EK R Sbjct: 512 AIFGSF----ERFIGVLIEHY----GGAWPVWLAPIQAVVLNITDRQGAYASGIEK---R 560 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L++ G + D E+IG + L P +IVG + V ++ R Sbjct: 561 LAEHGFRAYGDLRNEKIGFKIREHTLQKVPYLLIVGERERESMTVAVRTR 610 >gi|220928797|ref|YP_002505706.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10] gi|219999125|gb|ACL75726.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 635 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 5/133 (3%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G ++P G + + R E + G E+ P + + +LW+ SG +D+Y M +A Sbjct: 261 GFPFFMPKGMVLRNLLEDYWRSEHKKAGYQEIKTPVILNKELWLRSGHWDNYKNNMYTVA 320 Query: 98 -DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D A+ P + +F+ + SYR+LP ++ L R EL G+MR R F Sbjct: 321 IDEQDCAI--KPMNCPGGILVFKRKLHSYRDLPQRMGELGLVHRHELSGALHGLMRVRCF 378 Query: 156 LMKDAYSFDLTPE 168 DA+ F +TPE Sbjct: 379 TQDDAHIF-MTPE 390 >gi|307298932|ref|ZP_07578734.1| threonyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915357|gb|EFN45742.1| threonyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 648 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 89/412 (21%), Positives = 159/412 (38%), Gaps = 43/412 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 ++++ G+ +LP G + L+ + RE+ G E+S P + S LW SG +D Y ++ Sbjct: 264 YEYAPGMPVFLPKGTEMLNQLLQFSREKHVEDGYREVSTPQIMSDALWRTSGHWDHY-RD 322 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + ++ D+ P + +++S SYR+LP ++ R E G+ R Sbjct: 323 NMYFTEKEDQQFAVKPMNCPGHIIVYKSSSVSYRDLPMKLFEFGKVHRYERSGVLHGLFR 382 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE-- 209 R F+ DA+ F T E + + +I+ + RAE D E Sbjct: 383 VRGFVQDDAHIF-CTREQIQQEIMGVIDFVQKIYSPFNFE---YRAELSTRPEDYMGEVE 438 Query: 210 -FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + + E + K M+F + + F Y D H + Sbjct: 439 LWDIATKALEDSLLAKK--MEFKVNEGDGAF----------------YGPKIDYH---IK 477 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 DSL + + ++ FG KY P + ++ H GS R + + Sbjct: 478 DSLGREWQCATIQLDFMMPERFGIKYVGPDNEEYQPV--MIHRAIFGS----VERFMGIL 531 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 IE +P +AP ++S+I I + E + A L G V DD + Sbjct: 532 IEHFAGA----FPAWLAPTQVSVIPIADRHA---EYAESVAAELKSRGFRVEVDDRQKST 584 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 + A L+ P +IVG + D + ++ R ++L+E ++ S Sbjct: 585 NYKIREAQLMKVPYMIIVGDREKEDGTISVRLRSEKDLGSIALQEFMDKLSQ 636 >gi|229173066|ref|ZP_04300617.1| Threonyl-tRNA synthetase [Bacillus cereus MM3] gi|228610399|gb|EEK67670.1| Threonyl-tRNA synthetase [Bacillus cereus MM3] Length = 639 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + +LW +SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYKYQEVRTPFMMNQELWEKSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|224532379|ref|ZP_03673009.1| threonine--tRNA ligase [Borrelia burgdorferi WI91-23] gi|224512686|gb|EEF83057.1| threonine--tRNA ligase [Borrelia burgdorferi WI91-23] Length = 581 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 79/411 (19%), Positives = 163/411 (39%), Gaps = 55/411 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG D Y M Sbjct: 205 GLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 265 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGMMRARGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHE--FI 211 DA+ T ++ + ++ + G ++ + P +G D E Sbjct: 325 QDDAHII-CTHSQVLDEIKEVLRFAIYMWSKFGFSNLKAYLSTKPDKSVGNDSDWEMSLK 383 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 VL +T DF +P E I + A Y D+ K+ DSL Sbjct: 384 VLEET----------LSDFEVPYE------------IDKGGGAFYGPKIDL---KIVDSL 418 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAV 328 ++S + ++LP + T+ DGK+ M +G++ + Sbjct: 419 EREWQMSTIQFD----------FNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGI 468 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G +W ++P ++ +I + + + D K++ + G + D+ ++ Sbjct: 469 LVEHYGGAFPLW---LSPVQVVIIPV---NNIVEDYAIKVFNKFKNGGIRIKLDNSSSRM 522 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR----LTGIREDMSLEEVI 435 ++ P I+G + ++ ++ I+ R + GI+ D +L+ ++ Sbjct: 523 NAKIREYQAKKIPYMFIIGEREATEERISIRTRTNEQINGIKLDEALKFIL 573 >gi|71394075|gb|AAZ32114.1| prolyl-tRNA synthetase [uncultured euryarchaeote Alv-FOS5] Length = 472 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 9/174 (5%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + R +++ K+S ++ +G+ + S+GI + R +AA++ D +G Sbjct: 216 TGRTLQIATSHRLSQKFSEVFDVKYEDENGEQKLAYLTSHGI-SERAIAALVGIHGDNRG 274 Query: 338 IIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 ++ P AP ++ ++ I +QV A E +Y +L K V DD G +F Sbjct: 275 LVLPPRFAPVQVVIVPILYKGKENQVMEKAME-VYEKL-KYNWRVELDDSDSNPGDKFYY 332 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV---INYASHRFSNN 445 +L G P+++ +G + V + V + R T + + +EE+ IN + NN Sbjct: 333 WELRGVPIRIEIGPRDVENGVVTLARRDTKEKTQVKMEELEDKINRLAEEIHNN 386 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 8/191 (4%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLR 95 KG+ W P G K V ++RE TG E+ PTL + G + +G E+ Sbjct: 29 KGMLVWRPNGFKIRKYVTDLLRELLEETGHQEVLFPTLIPETALNKEGEHIRGFGSEVYW 88 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D + PT E M +F I+S+ +LP +QI FR E + ++R Sbjct: 89 ITHGGETPLDVKLALRPTSETAMYPMFALWIRSHADLPLRVFQIVSVFRYETKHTRPLIR 148 Query: 152 SREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSH 208 RE K+A+ T E ++ + Y + LG+ + ++ S G D + Sbjct: 149 VREVSTFKEAHCALKTEEEAEKEMRIIDGVYKAFWDELGIPFVRVQRPSWDKFAGADKTI 208 Query: 209 EFIVLADTGET 219 + + TG T Sbjct: 209 AYDTIMPTGRT 219 >gi|257139340|ref|ZP_05587602.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264] Length = 593 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 8/136 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G+ W P G V +R + G +E+ P + LW SG + +Y + Sbjct: 250 IQEEAPGMVFWHPKGWTLWQRVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHWQNYRE 309 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F+ ++SYR+LP + + R+E Sbjct: 310 NMFTTESEKRDYAIKPMNCPGH----VQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALH 365 Query: 148 GVMRSREFLMKDAYSF 163 G+MR R F+ DA+ F Sbjct: 366 GLMRVRGFVQDDAHIF 381 >gi|294508832|ref|YP_003572891.1| threonyl-tRNA synthetase, class IIa [Salinibacter ruber M8] gi|294345161|emb|CBH25939.1| threonyl-tRNA synthetase, class IIa [Salinibacter ruber M8] Length = 656 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 91/450 (20%), Positives = 161/450 (35%), Gaps = 67/450 (14%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD +L L T Q G+ WLP G + ++++EQ + G + P + Sbjct: 248 RDHRKLGTELNLFTFDTEQVGPGLPMWLPKGTTLRQTLQEVLQQEQVKQGYKPVCTPHIG 307 Query: 76 SADLWVESGRYDSYGKE----MLRLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLP 129 DL+ SG Y Y + M+ + + Y P + I+++ SYR+LP Sbjct: 308 RLDLYRTSGHYPHYEDDQFPPMVTGEGDDGEEDGYLLKPMNCPHHVKIYQNDHHSYRDLP 367 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + +R E G+ R R F DA+ F TP K + + L++ L Sbjct: 368 VRLAEFGTVYRQEQTGELGGLTRVRGFTQDDAHIF-CTPAQVKDEFKSVIDLTLKVLDAL 426 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G + + I L D +T+ + +D + Sbjct: 427 GFEEFEAQ--------------ISLRDPDDTEKYTGRDAL-------------------- 452 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE--------VGHIFYFGT---KYSLP 297 WT + E D+ E + G + +G + GT Y+LP Sbjct: 453 ---WTRAEQDIREAVAETDLDAYEEPGEAAFYGPKLDFMVEDALGRAWQLGTIQVDYNLP 509 Query: 298 MSATFKGADGKDHY---VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 D D V + G++ R + +IE G +P +AP ++ +I Sbjct: 510 ERFELTYVDEHDERKRPVMIHRAPFGSLERFIGVLIEHC----GGNFPTWLAPTQVQIIP 565 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 + D V D +++ A L V D E +G + A+ P ++VG Sbjct: 566 V-GDDFV--DYAQEVAATLRAEDVRVEIDTSDETVGYKIREAETQKVPYMLVVGGDEEEA 622 Query: 414 SKVEIKHRLTGIREDMSLEEVINYASHRFS 443 V ++ G + +S+++ ++ F Sbjct: 623 GTVSVRSHADGPQGTVSVQDFLDRTGPEFE 652 >gi|227111545|ref|ZP_03825201.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 642 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 85/409 (20%), Positives = 147/409 (35%), Gaps = 42/409 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + +W ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGPFMMDRVMWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + N ++ G + I ++ + P S E Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 433 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ + P E + I L D Sbjct: 434 WDRAEADLAAALTENNIEFAYQPGEGAFYGPKIEFT--------------------LHDC 473 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 L R + G + +SLP ++A++ G + M I G+M Sbjct: 474 LD-------RAWQCGTV---QLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ G +P +AP + +INI D ++ +L + G V D E+ Sbjct: 524 ILTEEFAG---FFPTWLAPVQAVIINITDSQS---DYVNELTRKLQEAGIRVKADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 IG + L P ++ G K V KV ++ R M + EVI+ Sbjct: 578 IGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVSEVIS 626 >gi|209516675|ref|ZP_03265528.1| threonyl-tRNA synthetase [Burkholderia sp. H160] gi|209502950|gb|EEA02953.1| threonyl-tRNA synthetase [Burkholderia sp. H160] Length = 635 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 90/424 (21%), Positives = 162/424 (38%), Gaps = 53/424 (12%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + + H S G+ W P G V +R N Sbjct: 231 YLHMLEE----AEKRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVND 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAM--IYGPTHEEVMTDIFRS 120 G +E+ P + LW SG + +Y + M +++ D A+ + P H +F Sbjct: 287 AGYLEIKTPLIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGH----VQVFNH 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHS--YNKM 177 ++SYR+LP + + R+E G+MR R F+ DA+ F + S +N + Sbjct: 343 GLRSYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTL 402 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +S R F G ++ ++ P + E A+ G + + +P E Sbjct: 403 AMSVYRDF---GFDNVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEELPGEG- 458 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 A Y + H + D+L + + +++ G +Y Sbjct: 459 ----------------AFYGPKVEYH---IKDALGRSWQCGTLQLDMVLPERLGAEY--- 496 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + + + + +G+M ++ H G W +AP ++ ++NI A Sbjct: 497 ----VAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAW---LAPMQVVVMNI-AE 548 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 Q + + + L K G V D E+I + L P ++VG K V Sbjct: 549 SQA--EYAQLLAQSLQKQGVRVEADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVA 606 Query: 418 IKHR 421 ++ R Sbjct: 607 VRAR 610 >gi|317491930|ref|ZP_07950364.1| threonyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920051|gb|EFV41376.1| threonyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 645 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 88/412 (21%), Positives = 153/412 (37%), Gaps = 50/412 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRVKLKEYDYQEVKGPFMMDRVLWEKTGHWENYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNSCIKMVYDMYSIFGFEKIAVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 + D E D + + N I ++ A E Sbjct: 432 ----EIWDRAE------------------EDLAEALKENGIPFEYQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L D L R + G + +SLP ++A++ G + + M I G+M Sbjct: 470 LHDCLD-------RAWQCGTV---QLDFSLPGRLNASYVGENNERLVPVMIHRAILGSME 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++NI D +++ +L G D Sbjct: 520 RFIGILTEEYAG---FYPTWLAPVQVQVMNIT---DAQADYVDELTKKLQAAGIRAKSDL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 574 RNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGTMDVNEVI 625 >gi|91776355|ref|YP_546111.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylobacillus flagellatus KT] gi|123254150|sp|Q1GZR7|SYT_METFK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91710342|gb|ABE50270.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylobacillus flagellatus KT] Length = 635 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 86/401 (21%), Positives = 146/401 (36%), Gaps = 56/401 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G V +R G E+ PT+ +W +SG + +Y Sbjct: 255 MQDEAPGMVFWHPRGWVIWQEVEQYMRNMFREFGYQEVRTPTIMDRVMWEKSGHWQNYHD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M A N + P + IF S + SYR+LP + R+E G+M Sbjct: 315 NMFTTASENRDYAV-KPMNCPGHIQIFNSTLHSYRDLPLRLAEFGSCHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + K V + + G + ++ + P +G D + Sbjct: 374 RVRGFTQDDAHIF-CTEDQVKDEVADFIVMLYKAYKDFGFNEVLVKLSTRPEKRVGTDEA 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + A V ++ +DF + P E + I Sbjct: 433 WDKAEEA----LAVALRQNNLDFELQPGEGAFYGPKIEFT-------------------- 468 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 L DSL G ++ GT ++LP + A + D + H V + +G Sbjct: 469 LKDSL-------------GRLWQCGTIQLDFNLPERLGAEYVDEDNSRKHPVMLHRAIVG 515 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 +M ++ ++ G W +AP + ++NI D + A L K G V Sbjct: 516 SMERFLGILIENYAGAMPAW---LAPVQAMVLNISDGQA---DYVSSVVAELRKNGFRVD 569 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+I + L P +I G + + +V ++ R Sbjct: 570 SDLRNEKITYKIREHSLQKLPYLLIAGEREMQTGQVAVRTR 610 >gi|224584156|ref|YP_002637954.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254783535|sp|C0Q647|SYT_SALPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|224468683|gb|ACN46513.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 642 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSPFGFEKIVVKLSTRPDKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 432 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G D + M I G+M Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI ++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVVMNITDSQS---GYVNELTQKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 611 >gi|206580341|ref|YP_002237974.1| threonyl-tRNA synthetase [Klebsiella pneumoniae 342] gi|288934884|ref|YP_003438943.1| threonyl-tRNA synthetase [Klebsiella variicola At-22] gi|290509026|ref|ZP_06548397.1| threonyl-tRNA synthetase [Klebsiella sp. 1_1_55] gi|238065116|sp|B5XQC6|SYT_KLEP3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|206569399|gb|ACI11175.1| threonyl-tRNA synthetase [Klebsiella pneumoniae 342] gi|288889593|gb|ADC57911.1| threonyl-tRNA synthetase [Klebsiella variicola At-22] gi|289778420|gb|EFD86417.1| threonyl-tRNA synthetase [Klebsiella sp. 1_1_55] Length = 642 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 85/411 (20%), Positives = 153/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N ++ G + I ++ + P IG D + Sbjct: 375 RVRGFTQDDAHIF-CTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 D E + + + + P + + A Y + L Sbjct: 434 ------WDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA++ G + + M I G++ Sbjct: 471 YDCLD-------RAWQCGTV---QLDFSLPQRLSASYVGENNERQVPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 521 FIGILTEEFAG---FFPTWIAPVQVVVMNITDSQA---EYVNELTRKLQNAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M + EVI Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVSEVI 625 >gi|163790751|ref|ZP_02185177.1| threonyl-tRNA synthetase [Carnobacterium sp. AT7] gi|159873931|gb|EDP68009.1| threonyl-tRNA synthetase [Carnobacterium sp. AT7] Length = 645 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 87/420 (20%), Positives = 167/420 (39%), Gaps = 52/420 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I + + G + P + +L+ SG +D Y ++M Sbjct: 262 GLPFWLPKGATIRRTIERYIVDREISLGYQHVYTPIMADVNLYKTSGHWDHYHEDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ + SYR LP ++ R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMVYKNDVHSYRELPIRIAELGQMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + D ++F + P+ + + + L ++ + R + P + ++ + Sbjct: 382 TLNDGHTF-VRPDQIEEEFKRTLELMLAVYGDFNITDYRFRLSYRDPNNTEKYYDDDAMW 440 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + +T + + D M D+ + E A Y DV + Sbjct: 441 EKAQTMLKAAMDDMGL-------DYFE-------AEGEAAFYGPKLDVLVK--------- 477 Query: 275 KRVSARGIE-----VGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAM-RVVA 326 +A GIE + F ++ L T+ G DG++++ V + + M R VA Sbjct: 478 ---TAIGIEETLSTIQLDFLLPERFDL----TYVGEDGENNHRPVVIHRGIVSTMERFVA 530 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +IE KG +P +AP + ++I N+ H D +I ++ ++G V D+ Sbjct: 531 YLIEEY---KG-AFPTWLAPVQATIIPVNLDMH----TDYAYEIKKQMERIGMRVEVDER 582 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E++G + + P Q++VG V D+ V ++ ++L E + S N Sbjct: 583 NEKMGYKIRASQTQKIPYQLVVGDSEVQDNTVAVRKYGEKATVTINLSEYLETVSKEIEN 642 >gi|18977665|ref|NP_579022.1| prolyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] gi|74580758|sp|Q8U1C4|SYP_PYRFU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|18893393|gb|AAL81417.1| prolyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] Length = 479 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 81/168 (48%), Gaps = 3/168 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + + ++ + ++ DG YV ++G+ R++AAVI D +G+ Sbjct: 220 GRTLQIGTMHNYKQNFAKAYNILYEKEDGTHDYVHQTTFGMSE-RLLAAVIAIHGDDRGM 278 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P ++AP ++ ++ I K ++ +I L G V D ++ G +F + Sbjct: 279 VLPPTIAPIQVVIVPIPKKGSEEEVYSYAREIEEELKLAGIRVHLDLRDKRPGWKFYDWE 338 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 L G P+++ VG + ++ V + R + +S EE+++ F + Sbjct: 339 LKGVPVRIEVGPRDAAEKTVVLARRDKLEKITVSREELVDKVRELFDD 386 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 5/123 (4%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+ WLP G K + N+ I EE RT E+ P L + E+ + E+ Sbjct: 32 KGMNVWLPYGLKIMKNIEKFIHEEMERTDHQEVLFPALIPETEFQKEAEHIAGFEGEVFW 91 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D ++ PT E M +F I+S+ +LPF YQI +R E + ++R Sbjct: 92 VTHAGHEPLDVRLVLRPTSETAMYSMFALWIRSHADLPFKVYQIVNVYRYETKHTRPLIR 151 Query: 152 SRE 154 RE Sbjct: 152 VRE 154 >gi|323137534|ref|ZP_08072611.1| threonyl-tRNA synthetase [Methylocystis sp. ATCC 49242] gi|322397160|gb|EFX99684.1| threonyl-tRNA synthetase [Methylocystis sp. ATCC 49242] Length = 643 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 1/132 (0%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + G W P G + + +R Q G E++ P + LW SG + +Y + Sbjct: 257 QEEGPGAIFWHPKGWTLFQTLVSYMRRRQKAAGYTEVNTPQVLDRALWETSGHWQTYREN 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +++ P + IF++ +KSYR+LP + + R E G+MR Sbjct: 317 MFVTKTEDERIFALKPMNCPGHVQIFKNGLKSYRDLPVKIAEFGVVHRYEPSGALHGMMR 376 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 377 VRAFTQDDAHIF 388 >gi|297748711|gb|ADI51257.1| Threonyl-tRNA synthetase [Chlamydia trachomatis D-EC] gi|297749591|gb|ADI52269.1| Threonyl-tRNA synthetase [Chlamydia trachomatis D-LC] Length = 660 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 22/184 (11%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAII---REEQNRTGAIEMSVPTLQSADLWVESGRY 86 GM H +G+ W NA++ + R G ++ P L + +LW SG + Sbjct: 281 GMPFFHPRGMVVW-----------NALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHW 329 Query: 87 DSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++Y + M L D D A+ P + +++ + SYR P +I R EL Sbjct: 330 ENYKENMYTLTVDEEDYAI--KPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELSG 387 Query: 146 RF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGP 201 G+MR R F DA+ F LTPE + + ++ GL+ + R E G Sbjct: 388 ALSGLMRVRTFHQDDAHVF-LTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQGT 446 Query: 202 IGGD 205 IG D Sbjct: 447 IGSD 450 >gi|289163681|ref|YP_003453819.1| Threonyl tRNA synthetase [Legionella longbeachae NSW150] gi|288856854|emb|CBJ10665.1| Threonyl tRNA synthetase [Legionella longbeachae NSW150] Length = 639 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 82/393 (20%), Positives = 140/393 (35%), Gaps = 48/393 (12%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G + +R G E+ P L LW +SG + ++ EM Sbjct: 259 APGMVFWHPKGWTIYQELERYMRHRLADFGYQEIRTPQLVDRVLWEKSGHWANFRDEMF- 317 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + ++ P + +F +KSYR+LP F + R E G+MR R Sbjct: 318 VTETENRHYAVKPMNCPCHVQVFNQGLKSYRDLPLRFSEFGNCHRCEPSGSLHGLMRVRN 377 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + DA+ F T + + M ++ G I R P S E A Sbjct: 378 MVQDDAHIF-CTEDQIQSEVAMMLELVQSVYTDFGFNEIKYRLALRPEKRVGSDEVWDKA 436 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + Q ++ P E + I + L D L Sbjct: 437 EAALKQAMKERNIEWVDAPGEGAFYGPKIECS--------------------LSDCL--- 473 Query: 275 KRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAV 328 G I+ GT +S+P + A + DG K V + +G+ + Sbjct: 474 ----------GRIWQCGTIQVDFSMPGRLDAIYIAEDGSKQTPVMLHRAILGSFERFMGI 523 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + GK +W ++P + ++ I + EK+ L K G +D E+I Sbjct: 524 LIEHYAGKLPLW---LSPVQAIIMTISEKQS---EYAEKVTQILQKNGIRANFDLRNEKI 577 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G + L P +++G K V +V ++ R Sbjct: 578 GFKIREHTLQKIPYLLVIGDKEVESGQVAVRTR 610 >gi|119953497|ref|YP_945706.1| threonyl-tRNA synthetase [Borrelia turicatae 91E135] gi|254783510|sp|A1R0E4|SYT_BORT9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119862268|gb|AAX18036.1| threonyl-tRNA synthetase [Borrelia turicatae 91E135] Length = 583 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 83/414 (20%), Positives = 160/414 (38%), Gaps = 46/414 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G + + REE + G + P + + LW SG D Y + M Sbjct: 205 GLIFFHPSGARIRALIEDFWREEHFKNGYDILFTPHVGKSWLWETSGHLDFYKESMFEKM 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G MR R F Sbjct: 265 EMDKSNYYVKPMNCPFHIAIYNTGRHSYRDLPFRWAELGTVYRYEKVGALHGTMRVRGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--GDLSHEFIVLA 214 DA+ T + K ++ L ++++ G ++ + P GD Sbjct: 325 QDDAHII-CTYDQVKFEVQEVLRFALYMWNKFGFTALKAYLSTKPEKSVGD--------- 374 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 E S + + + D+D I E A Y D+ K+ DSL Sbjct: 375 ---EDDWIMSVKVLKEALINLGIDYD-------IDEGGGAFYGPKIDL---KIIDSLGRE 421 Query: 275 KRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIES 331 ++S + ++LP T+ DGK+ M +G++ ++ Sbjct: 422 WQMSTIQFD----------FNLPARFKMTYTAEDGKERQPFMIHRALLGSIERFFGILVE 471 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGS 390 + G +W +AP ++ +I + + + + ++ +R K G + D D ++ + Sbjct: 472 HYGGAFPVW---LAPLQVVIIPV---NNIVEEYALEVLSRFKKEGIRIKLDNDCNMRMNA 525 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + P IVG K V + K+ I+ R + L+E + + + SN Sbjct: 526 KIRQYQSQKVPYMFIVGEKEVVEGKISIRTRTNEQINGLELKEALEFVKLKVSN 579 >gi|229496081|ref|ZP_04389803.1| threonyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] gi|229316977|gb|EEN82888.1| threonyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] Length = 672 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 92/409 (22%), Positives = 151/409 (36%), Gaps = 71/409 (17%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-- 95 G+ WLP G + + +++ Q G ++ P + + +L+ SG Y YG + R Sbjct: 284 GLPLWLPRGTRLRLRLEDFLKKIQKDFGYQQVMTPHIGNIELYKTSGHYAKYGADSFRPI 343 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + + P + +I+R SYR+LP + +R E G+ R R Sbjct: 344 TTPQEGEEFMLKPMNCPHHCEIYRIKPHSYRDLPVRLAEFGTVYRYEQSGELHGLTRVRG 403 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F TPE K + K+ IF L ++ + I L Sbjct: 404 FTQDDAHIF-CTPEQVKDEFLKVMDIIFIIFKALKFENFEAQ--------------ISLR 448 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D + + D E W A + EK ++ E Sbjct: 449 DKNNREKYIGSD-----------------------ENWDRAEQAIIEACQEKGLPAVVEY 485 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 + G + +G + GT Y+LP + G D + H V + G Sbjct: 486 GEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFDLEYTGEDNQKHRPVMIHRAPFG 545 Query: 321 AM-RVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRD--ACEKIYARLSKV 375 +M R VA +IE + G+ +W PD V I N + RD A I A + Sbjct: 546 SMERFVAVLIEHTA-GRFPLWLTPDQVVVLPIGE-NFNEYAYKVRDFLANHDITATV--- 600 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 DD E+IG + +L P +IVG++ + V ++ + G Sbjct: 601 ------DDRNEKIGRKIRDNELKRIPYLLIVGAQESENETVSVRKQGEG 643 >gi|198425233|ref|XP_002123203.1| PREDICTED: similar to novel prtoein similar to vertebrate threonyl-tRNA synthetase (TARS, zgc:92586) [Ciona intestinalis] Length = 630 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 83/413 (20%), Positives = 163/413 (39%), Gaps = 41/413 (9%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G + P G + + + I+EE + G E+ P + ++ LW+ SG + Y + Sbjct: 230 FHELSPGSCFFFPRGAFIYNTLISFIKEEYRKRGFEEVVSPNIYNSKLWMTSGHWQHYDQ 289 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +S+R LP F + R+EL G+ Sbjct: 290 NMFSFSVEKE-TFALKPMNCPGHCLMFSHRSRSWRELPIRFADFGVLHRNELSGALTGLT 348 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHE 209 R R F DA+ F PE K ++ G + + GD Sbjct: 349 RVRRFQQDDAHIF-CRPEQIKDEMRGALNFLKAVYDTFGFSFKLFLSTRPEKFLGDPG-- 405 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + D E Q+ + ++F P + D A Y D+ ++ D Sbjct: 406 ---MWDDAEKQL--EECLVEFDHPWKLNPGDG------------AFYGPKIDI---QIMD 445 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 +L + + ++ F Y T +G D K V + +G++ + A++ Sbjct: 446 ALRRPHQCATIQLDFQLPIRFNLNY-----VTGEG-DEKKRPVIIHRAILGSVERMIAIL 499 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVGCDV-FWDDMGEQ 387 ++ GK WP ++P ++ ++ + + +D+ E + R+ + G V D G Sbjct: 500 TENYGGK---WPLWLSPRQVMILAVSSKYDEY----AESVRLRMHEAGIQVDLEKDPGLT 552 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 + + A L + ++VG K ++ V I+ R + +++++ VI+ H Sbjct: 553 LNKKIRTAQLEQYNFILVVGEKEETNGTVNIRTRDNKVHGELTVQAVIDRLLH 605 >gi|156978155|ref|YP_001449061.1| threonyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116] gi|156529749|gb|ABU74834.1| hypothetical protein VIBHAR_06960 [Vibrio harveyi ATCC BAA-1116] Length = 394 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 33/166 (19%), Positives = 77/166 (46%), Gaps = 3/166 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +++ + +R +R+G E++ P +LW +SG D + + M Sbjct: 22 GMIFWHPNGWRLFESIKSHMRSVYHRSGFQEVNTPVFMKQELWQKSGHIDMFSENMFFGG 81 Query: 98 DRNDKA-MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ ++ + P +++ + S+++LP ++ L R+E G +R+R+F Sbjct: 82 NQEQQSGYVLKPMSCPAHILLYKRGVHSHKDLPIKLFEFGLVHRNESSGSLNGCLRARQF 141 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 DA+ F E ++ + +++ G + I ++ + P Sbjct: 142 TQDDAHVF-CQWEQAEDEVRQFLQRARKVYAAYGYEHIEVKVSTKP 186 >gi|291533300|emb|CBL06413.1| threonyl-tRNA synthetase [Megamonas hypermegale ART12/1] Length = 423 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 92/414 (22%), Positives = 163/414 (39%), Gaps = 53/414 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H+ G + P G + + RE + G E+ P + + LW SG +D Y + Sbjct: 43 LHEEGPGFPFFHPNGMVIRNELINYWREVHRQFGYQEIKTPMIMNRKLWETSGHWDHYKE 102 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + ++ + SYR+LP ++ L R EL G+ Sbjct: 103 NMYFTKIDGEDYAI--KPMNCPGGMLVYLTQQHSYRDLPLRLGELGLVHRHELSGALHGL 160 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 MR R F DA+ F + P + ++ + +++ GL + R E +G D Sbjct: 161 MRVRNFTQDDAHIF-MLPNQIEDEIQRVIDLFDKVYSTFGLTYHAELSTRPEDS-MGSD- 217 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + ET ++ + E+ +I+ E A Y D H Sbjct: 218 --------EVWETATNALRNAL------EHRGLKYVIN-----EGDGAFYGPKIDFH--- 255 Query: 267 LFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM 322 L DS+ R + G I K+ L T+ G DG+ H V + G++ Sbjct: 256 LTDSI-------GRTWQCGTIQLDMLMPEKFDL----TYIGEDGQKHRPVMIHRVVYGSI 304 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ ++ G +P +AP ++ ++ I D+ D +I ++ +G V D Sbjct: 305 ERFIGILIENYAGA---FPAWLAPVQVKILPIS--DKYV-DYAYEIKRKMFDLGIRVEVD 358 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + A + P +IVG + + + ++ R M + IN Sbjct: 359 DRNEKIGYKIREAQVKKVPYSIIVGESELENKNISVRKRREKDTVTMDTDTFIN 412 >gi|270158051|ref|ZP_06186708.1| threonyl-tRNA synthetase [Legionella longbeachae D-4968] gi|269990076|gb|EEZ96330.1| threonyl-tRNA synthetase [Legionella longbeachae D-4968] Length = 639 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 82/393 (20%), Positives = 140/393 (35%), Gaps = 48/393 (12%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G + +R G E+ P L LW +SG + ++ EM Sbjct: 259 APGMVFWHPKGWTIYQELERYMRHRLADFGYQEIRTPQLVDRVLWEKSGHWANFRDEMF- 317 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + ++ P + +F +KSYR+LP F + R E G+MR R Sbjct: 318 VTETENRHYAVKPMNCPCHVQVFNQGLKSYRDLPLRFSEFGNCHRCEPSGSLHGLMRVRN 377 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + DA+ F T + + M ++ G I R P S E A Sbjct: 378 MVQDDAHIF-CTEDQIQSEVAMMLELVQSVYTDFGFNEIKYRLALRPEKRVGSDEVWDKA 436 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + Q ++ P E + I + L D L Sbjct: 437 EAALKQAMKERNIEWVDAPGEGAFYGPKIECS--------------------LSDCL--- 473 Query: 275 KRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAV 328 G I+ GT +S+P + A + DG K V + +G+ + Sbjct: 474 ----------GRIWQCGTIQVDFSMPGRLDAIYIAEDGSKQTPVMLHRAILGSFERFMGI 523 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + GK +W ++P + ++ I + EK+ L K G +D E+I Sbjct: 524 LIEHYAGKLPLW---LSPVQAIIMTISEKQS---EYAEKVTQILQKNGIRANFDLRNEKI 577 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G + L P +++G K V +V ++ R Sbjct: 578 GFKIREHTLQKIPYLLVIGDKEVESGQVAVRTR 610 >gi|251795037|ref|YP_003009768.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247542663|gb|ACS99681.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 637 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 88/421 (20%), Positives = 152/421 (36%), Gaps = 45/421 (10%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP G + RE NR E+ P + + +W +SG ++ Y Sbjct: 257 MFSEEAPGMPFYLPKGMAIRTALENFSRELLNRNDYEEVRTPFMMNKRMWEQSGHWEHY- 315 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 K+ + ++ P + IF++ ++SYR LP + R EL G+ Sbjct: 316 KDNMYFTKVDESEFALKPMNCPGHMLIFKNSLRSYRELPVRLAEFGQVHRHELSGALGGM 375 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F DA+ F + P+ + K+ ++ G Sbjct: 376 MRVRTFCQDDAHLF-VRPDQIEEEIGKVMSLIGEVYKVFGFA------------------ 416 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + V T S + D S D I E A Y D H + D Sbjct: 417 YTVELSTRPADYMGSDELWDEAEQSLKNVLDAQGVNYRINEGDGAFYGPKIDFH---IVD 473 Query: 270 SLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVV 325 +L R + G I F K+ L ++ G D K + I G++ Sbjct: 474 AL-------KRSWQCGTIQLDFQMPEKFDL----SYIGEDNKKQRPVVIHRAIYGSLDRF 522 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G IW +AP + +I + H+ D ++ ++L + G V D Sbjct: 523 LGILIEHYSGAFPIW---LAPVQAKVIPVSEHEL---DYALQVKSQLIQAGIRVEVDARS 576 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 E++G++ + L P ++VG V ++ R LEE+ F Sbjct: 577 EKLGNKIRKSQLEKVPYMLVVGKNERLSGSVSVRKRGEAEGSVQQLEEIAGAIVEEFRKR 636 Query: 446 R 446 R Sbjct: 637 R 637 >gi|224531616|ref|ZP_03672248.1| threonyl-tRNA synthetase [Borrelia valaisiana VS116] gi|224511081|gb|EEF81487.1| threonyl-tRNA synthetase [Borrelia valaisiana VS116] Length = 581 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 78/414 (18%), Positives = 158/414 (38%), Gaps = 47/414 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG D Y M Sbjct: 205 GLVFFHPNGAKIRSLIEDFWREEHSKNGYDILFTPHVGKSWLWQTSGHLDFYKDSMFEKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 265 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGMMRARGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ T ++ + ++++ G S+ + P +G D Sbjct: 325 QDDAHII-CTHSQVVDEIKEVLRFAIYMWNKFGFNSLKAYLSTKPDKSVGND-------- 375 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 AD + + DF +P E I + A Y D+ K+ DSL Sbjct: 376 ADWEMSLKVLEETLSDFEVPYE------------IDKGGGAFYGPKIDL---KIVDSLER 420 Query: 274 NKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIE 330 ++S + ++LP + T+ DGK+ M +G++ ++ Sbjct: 421 EWQMSTIQFD----------FNLPERFNMTYTADDGKEKRPFMIHRALLGSIERFFGILV 470 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G +W ++P + +I + + D K+ + G + D+ ++ + Sbjct: 471 EHYGGAFPLW---LSPVQAVIIPV---NNTVEDYAIKVLNKFKNEGIRIKLDNSSSRMNA 524 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + P I+G + V++ ++ I+ R + L E + + + N Sbjct: 525 KIREYQAKKIPYMFIIGEREVAEERISIRTRTNEQINGIELNEALKFILLKIRN 578 >gi|124027657|ref|YP_001012977.1| bifunctional aminoacyl-tRNA synthetase [Hyperthermus butylicus DSM 5456] gi|123978351|gb|ABM80632.1| Bifunctional aminoacyl-tRNA synthetase [Hyperthermus butylicus DSM 5456] Length = 380 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 7/151 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++G + + G +++P + D Y SYGI R+VA VI D +G Sbjct: 223 GKTLQIGTVHHLGQNFTVPFDVKIQLRDESIDYAWQTSYGISD-RIVATVIAIHGDDRGA 281 Query: 339 IWPDSVAPFKISLINIKAHD-----QVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQF 392 + P +VAP ++ +I I A D ++ + EK+ L K G DD + + G +F Sbjct: 282 VLPPNVAPIQVVVIPIPAGDDEEKKRLVAEHLEKVKEVLKKAGIRFRVDDREDVRPGRKF 341 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + G P+++ VG + V + R T Sbjct: 342 YEWEAKGVPVRIEVGLREAETGTVLVARRDT 372 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 28/177 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL----------------W 80 KG+ WLP G + + ++RE + TG E+ +P L L W Sbjct: 35 KGMGIWLPYGFQLRRRIIELVREVLDSTGHEEILMPLLIPEHLLRKESEHIRGFEGEVYW 94 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 V G G E L D + PT E +T + IKSYR LP +YQI FR Sbjct: 95 VTHG-----GHEPL------DVKLALRPTSETSITYMESFWIKSYRQLPKKYYQIVSIFR 143 Query: 141 DELRPRFGVMRSREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 E + ++R RE K+A++ + + + Y +IF LG+ + R Sbjct: 144 YETKATRPMIRLREVTTFKEAHTVHDSFADADRQVAEAIELYKKIFDELGIPYVISR 200 >gi|150018038|ref|YP_001310292.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|149904503|gb|ABR35336.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 635 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 95/454 (20%), Positives = 174/454 (38%), Gaps = 58/454 (12%) Query: 4 SKYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 SK L + N +A+ H+ + L+ + G LP G + + R+ Sbjct: 224 SKKELEVHLHNLEEAKKRDHRKLGKELKLFTFAEEGPGFPFMLPKGVILKNTLIDFWRKL 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +E+ P + + LW SG + Y +E + + +++ P + +++S Sbjct: 284 HYEDGYVEIETPIMLNKKLWETSGHWYHY-RENMYTSSIDEEEFALKPMNCPGGMLVYKS 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SYR+ P ++ R EL G+MR R F DA+ F + P+ K + Sbjct: 343 ESHSYRDFPMRVGELGRVHRHELSGALHGLMRVRAFTQDDAHIF-MLPDQIKSEIKGVIN 401 Query: 180 SYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 +++ + G K + R E +G D E E+ + + D ++ Sbjct: 402 LIDKVYSKFGFKYNLELSTRPEDS-MGSDEEWEL------AESSLKGALDELNLEYKINE 454 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---K 293 D A Y D H L DS +G + GT Sbjct: 455 GD--------------GAFYGPKIDFH---LEDS-------------IGRTWQCGTIQLD 484 Query: 294 YSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 + LP + G+DG+ H + + G++ ++ GK +P ++P ++ Sbjct: 485 FQLPQRFELEYVGSDGEKHRPIVIHRVVFGSIERFIGILIEHFAGK---FPTWLSPVQVK 541 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 ++ I EKI +LS G V D E+IG + A P +IVG K Sbjct: 542 ILPI---SNKFNSYSEKIKDKLSSEGIRVEIDQKDEKIGYKIREARNERVPYIIIVGEKE 598 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +++ + ++ R G ++LE++I ++ N Sbjct: 599 AAENNISLRSRSNGDEGTLNLEDLIERINNEVKN 632 >gi|296536619|ref|ZP_06898695.1| threonine--tRNA ligase [Roseomonas cervicalis ATCC 49957] gi|296263053|gb|EFH09602.1| threonine--tRNA ligase [Roseomonas cervicalis ATCC 49957] Length = 660 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 70/179 (39%), Gaps = 10/179 (5%) Query: 17 DAEIASH-KLMLRTGMIHQHSKGIYS--WLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ G+ H + + S W P G + + +R Q G E+ P Sbjct: 238 EAERRDHRKIGKEMGLFHLQEEAVGSIFWHPKGWRLYTTLQDYMRRRQEAGGYQEVRTPQ 297 Query: 74 LQSADLWVESGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 L LW SG +D Y + M D+ + P + IF ++SYR LP Sbjct: 298 LVDRKLWEASGHWDKYRENMFIATVDDESEKDRVLALKPMNCPCHVQIFNHGLRSYRELP 357 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 + R E G+MR R F+ DA+ F E + FV+ L +R Sbjct: 358 LRMAEFGACHRYEPSGALHGIMRVRSFVQDDAHIF--CAEDQIAAETVEFVALLSAVYR 414 >gi|146169598|ref|XP_001017218.2| threonyl-tRNA synthetase family protein [Tetrahymena thermophila] gi|146145134|gb|EAR96973.2| threonyl-tRNA synthetase family protein [Tetrahymena thermophila SB210] Length = 882 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 HQ S G + P G + + ++R++ G E+ P L A LW SG +D Y + Sbjct: 353 FHQFSPGCAFFYPNGAHIYNKLMEVLRKQYKIRGYSEVITPNLFDAQLWKISGHWDKYKE 412 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M L + N++ + P + +F S +SYR+LP + + R+E+ G+ Sbjct: 413 NMFLLKNDNEEHG-FKPMNCPAHCLMFDSIQRSYRDLPLRYADFGVLHRNEVHGALSGLT 471 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 472 RVRRFQQDDAHIF 484 >gi|237740439|ref|ZP_04570920.1| threonyl-tRNA synthetase [Fusobacterium sp. 2_1_31] gi|229422456|gb|EEO37503.1| threonyl-tRNA synthetase [Fusobacterium sp. 2_1_31] Length = 637 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 87/433 (20%), Positives = 177/433 (40%), Gaps = 52/433 (12%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + L I ++ G +LP G + + + R+E + G +++ P Sbjct: 236 EAEKRDHRKLGKDLELFFISEYGPGFPFFLPKGMVFRNVLIDLWRKEHEKAGYLQLETPI 295 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + + +LW SG + +Y +E + ++ ++ P + F+ + SY++LP Sbjct: 296 MLNKELWEISGHWFNY-RENMYTSEIDELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLA 354 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ R E G+MR R F D++ F +TP+ + +G+ + Sbjct: 355 ELGKVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEI-------------IGVVN 400 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 + R S G E+ + T + S++ D + D + I Sbjct: 401 LIDRFYSKLFG----FEYEIELSTKPEKAIGSQEIWDMAESALAGALDKLGRKYKINPGD 456 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG 307 A Y D K+ D+ +G ++ GT ++LP T+ G DG Sbjct: 457 GAFYGPKLDF---KIKDA-------------IGRMWQCGTIQLDFNLPERFDVTYIGEDG 500 Query: 308 KDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + H V + G++ ++ + G +W +AP ++ ++ + + C + Sbjct: 501 EKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMW---LAPVQVKVLTL---NDECIPYAK 554 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +I +L ++G DD E IG + A+ P+Q+I+G V + +V I+ + Sbjct: 555 EIMDKLQELGIRAELDDRNETIGYKIREANGRYKIPMQLIIGKNEVENKEVNIRRFGSKD 614 Query: 426 REDMSLEEVINYA 438 + SL++ +Y Sbjct: 615 QFSKSLDDFYDYV 627 >gi|221633051|ref|YP_002522276.1| threonyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] gi|221156502|gb|ACM05629.1| threonyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] Length = 596 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 90/419 (21%), Positives = 163/419 (38%), Gaps = 68/419 (16%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ WLP G K L+ + R+E + G E++ P + LW SG +D Y + M Sbjct: 211 APGMPYWLPKGLKILNLLLDFWRQEHEKRGYQEIAAPLINDKSLWEVSGHWDHYRENMFL 270 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 + + D+ + YG P + ++ +SYR+LP + R E G++R Sbjct: 271 I--QLDEHLTYGVKPMNCPNAMIVYNLKKRSYRDLPLRLSDCDILHRYERSGTLHGLLRV 328 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R+F DA+ F +T + + + ++ + GL+ +R + P Sbjct: 329 RKFQQDDAHIF-VTEDQIEEEFARILEIAQLFYGIFGLRYT-LRLGTRP----------- 375 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP------------YAATS 260 DFM P + + +L I+++ P Y Sbjct: 376 ------------ADFMGDPETWDKAE----AALQRILDRHAGPGNYLIGEGEGAFYGPKI 419 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSY 317 D+ E D+L R + G I + LP T+ DG + V + Sbjct: 420 DILME---DAL-------GRQWQTGTI---QLDFQLPRRFGCTYTDRDGTEKTPVVIHRV 466 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G++ ++ G +W +AP + ++I I D+ A ++ RL G Sbjct: 467 IYGSLERFIGILIEHFAGAFPVW---LAPVQATIIPIA--DRHLPYAY-RVRDRLRDAGL 520 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 V DD E++ ++ A L P ++VG + V++ + ++ R MS+E I Sbjct: 521 RVEVDDGDERMQAKIRSAQLQKIPYMLVVGDREVNEESLAVRLRTNENIGSMSIERFIT 579 >gi|255654137|ref|ZP_05399546.1| prolyl-tRNA synthetase [Clostridium difficile QCD-23m63] Length = 481 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 2/165 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF +G S+G + R++ +I + D +G+ Sbjct: 226 GKALQSGTSHFLGQHFTKAFDITFADREGNLANPYHTSWG-ASTRLIGGLIMTHSDNRGL 284 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 + P VAP ++ ++ I A + +KIYA L G V DD G +F ++ Sbjct: 285 VLPPRVAPIQVVIVPIAAKKGNVMETVDKIYADLKAKGVAVEVDDRDNYTTGWKFNEWEM 344 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G P+++ +G K + +++ + R T ++ M LE + + F Sbjct: 345 KGVPVRIEIGPKDIENNQAMVFRRDTLEKDSMPLEGLADAVCDLF 389 >gi|254973701|ref|ZP_05270173.1| prolyl-tRNA synthetase [Clostridium difficile QCD-66c26] gi|255091091|ref|ZP_05320569.1| prolyl-tRNA synthetase [Clostridium difficile CIP 107932] gi|255312746|ref|ZP_05354329.1| prolyl-tRNA synthetase [Clostridium difficile QCD-76w55] gi|255515507|ref|ZP_05383183.1| prolyl-tRNA synthetase [Clostridium difficile QCD-97b34] gi|255648599|ref|ZP_05395501.1| prolyl-tRNA synthetase [Clostridium difficile QCD-37x79] gi|306518723|ref|ZP_07405070.1| prolyl-tRNA synthetase [Clostridium difficile QCD-32g58] Length = 481 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 2/155 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF +G S+G + R++ +I + D +G+ Sbjct: 226 GKALQSGTSHFLGQHFTKAFDITFADREGNLANPYHTSWG-ASTRLIGGLIMTHSDNRGL 284 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 + P VAP ++ ++ I A + +KIYA L G V DD G +F ++ Sbjct: 285 VLPPRVAPIQVVIVPIAAKKGNVMETVDKIYADLKTKGVAVEVDDRDNYTTGWKFNEWEM 344 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G P++V +G K + +++ + R T ++ M LE Sbjct: 345 KGAPVRVEIGPKDIENNQAMVFRRDTLEKDSMPLE 379 >gi|315651290|ref|ZP_07904318.1| threonine--tRNA ligase [Eubacterium saburreum DSM 3986] gi|315486442|gb|EFU76796.1| threonine--tRNA ligase [Eubacterium saburreum DSM 3986] Length = 651 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 86/396 (21%), Positives = 152/396 (38%), Gaps = 41/396 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIRE-EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ LP G K + + I + E N G + P + +DL+ SG +D Y M Sbjct: 259 QGLPLMLPKGTKMIQKLQRWIEDLEDNEWGYVRTKTPLMAKSDLYKISGHWDHYQDGMFI 318 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 L D I P ++++ KSYR+LP+ + FR+E G+ R Sbjct: 319 LGDPQHDGEILALRPMTCPFQYYVYKNTQKSYRDLPYRMGETSTLFRNEDSGEMHGLTRV 378 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEFI 211 R+F + + ++ + P+ ++ + + LGL+ + R D +++ Sbjct: 379 RQFTISEGHNV-IRPDQAEEELQNCLNLAIYVLETLGLRDDVTFRLSK----WDKNNKEK 433 Query: 212 VLADTG---ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 L D TQ ++ +P D + I Q Y + +L Sbjct: 434 YLGDEAYWEGTQAALRNILVEKGLPFTEADGEAAFYGPKIDIQAKNVYGKEDTMITIQLD 493 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 ++ EN ++ +I G K + H +G Y R +A + Sbjct: 494 AAIAEN-------FDLYYIDQNGAKVRPYIV----------HRTSLGCY----ERTLAWL 532 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 IE + GK W + P ++ ++ I D+ D + L K G D D E+I Sbjct: 533 IE-KYAGKFPTW---LCPEQVRILPI--SDKYA-DYANSVLKELKKNGVDATVDTRTEKI 585 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 G + A L P ++VG K ++ V ++ R G Sbjct: 586 GFKIRDARLSRLPYMLVVGEKEEAEGSVSVRSRFAG 621 >gi|269986191|gb|EEZ92503.1| prolyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 477 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 3/148 (2%) Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y G ++ P F + Y S+GI +MR + ++ D KG++ VAP++ Sbjct: 231 YLGQNFAKPFDIKFLDEKNELQYPFQTSWGI-SMRSIGIMLLVHGDDKGLVLSPHVAPYQ 289 Query: 349 ISLIN-IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIV 406 +I IK + C +I +RL ++G V D + G + DL G PL++ + Sbjct: 290 CVIIPIIKEEKDKVLEYCGQIESRLKEIGIRVLLDSREDYSPGWKLNEYDLKGVPLKIQI 349 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G + + + +K R+ ++ +S E+ Sbjct: 350 GKRELESRNISLKTRINNVQSIVSFNEI 377 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ + PT E +M D + IKSYR+LP Q R E + +R RE L ++ Sbjct: 102 DERLAIRPTSETIMYDSYSKWIKSYRDLPLLINQWNTMVRWETKETRLFLRGREVLWQEG 161 Query: 161 YS-FDLTPEGSKHS 173 + F E K++ Sbjct: 162 HCVFKTEEEADKNA 175 >gi|170726837|ref|YP_001760863.1| threonyl-tRNA synthetase [Shewanella woodyi ATCC 51908] gi|238688661|sp|B1KG61|SYT_SHEWM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169812184|gb|ACA86768.1| threonyl-tRNA synthetase [Shewanella woodyi ATCC 51908] Length = 642 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 83/397 (20%), Positives = 143/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR++ + E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTNSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + + G K I ++ + P IG D Sbjct: 375 RVRGFTQDDAHVF-CTEDQVQQEVSACIKMVYDTYETFGFKDIVVKLSTRPEKRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ Q + D +P E + I L Sbjct: 432 -DMWDRAEEALKQALTANDIAYEILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + GK W +AP + ++NI D +++ L + G D Sbjct: 521 FLGILIEEYAGKFPTW---LAPMQAVVMNITDKQS---DYVDEVVNILKENGIRASKDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|54295556|ref|YP_127971.1| threonyl tRNA synthetase [Legionella pneumophila str. Lens] gi|73919803|sp|Q5WT82|SYT_LEGPL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|53755388|emb|CAH16884.1| Threonyl tRNA synthetase [Legionella pneumophila str. Lens] Length = 637 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 84/396 (21%), Positives = 147/396 (37%), Gaps = 54/396 (13%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G + +R G E+ P L LW +SG + ++ EM Sbjct: 259 APGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKSGHWANFRDEMF- 317 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + ++ P I+ +KSYR+LP + R E G+MR R Sbjct: 318 VTETENRHYAVKPMSCPCHVQIYNHGLKSYRDLPLRLSEFGNCHRCEPSGALHGLMRVRN 377 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFI 211 + DA+ F T + + M ++ G I R P +G D Sbjct: 378 MVQDDAHIF-CTEDQIQSEVAMMLELVQSVYKDFGFTEIKYRLALRPEKRVGSD------ 430 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + D ET + + N ++ D AP + K+ SL Sbjct: 431 DVWDKAETA-------LKLAMQGRNIEWVD------------AP--GEGAFYGPKIECSL 469 Query: 272 PENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVV 325 + +G I+ GT +S+P + A++ DG K V + +G+ Sbjct: 470 SDC---------LGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + GK +W ++P + ++ I + EK+ L K G +D Sbjct: 521 MGILIEHYAGKLPLW---LSPVQAVVLTISEKQN---EYAEKVRKTLQKRGVRANFDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG K V + +V ++ R Sbjct: 575 EKIGFKIREHTLQKIPYLLVVGDKEVENCQVAVRTR 610 >gi|118566325|gb|ABL01534.1| tRNA synthetase [Mycosphaerella fijiensis] Length = 182 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 3/161 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 HQ S G +LP G +++ A ++EE R G E++ P + ++ LW +SG + Y + Sbjct: 15 FHQMSPGSAFFLPHGMIIYNSLMAYLKEEYWRRGYQEVASPNMYNSALWKQSGHWQHYHE 74 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +M DK + P + +F +SYR LP + R+E G+ Sbjct: 75 DMFTFDVEKDKWAL-KPMNCPGHCLLFAHRERSYRELPMRIADFGILHRNEASGALTGLT 133 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 R R F D + F T + N +F + ++ R G K Sbjct: 134 RVRRFQQDDTHIF-CTEAQIEQEINGLFDFMMAVYGRFGFK 173 >gi|296163127|ref|ZP_06845898.1| threonyl-tRNA synthetase [Burkholderia sp. Ch1-1] gi|295886629|gb|EFG66476.1| threonyl-tRNA synthetase [Burkholderia sp. Ch1-1] Length = 635 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 88/424 (20%), Positives = 162/424 (38%), Gaps = 53/424 (12%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + + H S G+ W P G V +R N Sbjct: 231 YLHMLEE----AEKRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVND 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAM--IYGPTHEEVMTDIFRS 120 G +E+ P + LW SG + +Y + M +++ D A+ + P H +F Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGH----VQVFNH 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHS--YNKM 177 ++SYR+LP + + R+E G+MR R F+ DA+ F + S +N + Sbjct: 343 GLRSYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTL 402 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +S ++ G ++ ++ P + E A+ G + + +P E Sbjct: 403 AMS---VYKDFGFDNVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEELPGEG- 458 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 A Y + H + D+L + + +++ G +Y Sbjct: 459 ----------------AFYGPKVEYH---IRDALGRSWQCGTLQLDMVLPERLGAEY--- 496 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + + + + +G+M ++ H G W +AP ++ ++NI A Sbjct: 497 ----VAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAW---LAPMQVVVMNI-AE 548 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 Q + + + L K G V D E+I + L P ++VG K V Sbjct: 549 SQT--EYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVA 606 Query: 418 IKHR 421 ++ R Sbjct: 607 VRAR 610 >gi|238783384|ref|ZP_04627407.1| Threonyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] gi|238715629|gb|EEQ07618.1| Threonyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] Length = 642 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 83/408 (20%), Positives = 145/408 (35%), Gaps = 70/408 (17%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRLAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA--ATSDVHNE 265 EQWT + A + N Sbjct: 432 ------------------------------------------EQWTRAESDLAAALTENG 449 Query: 266 KLFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGADGKDHYVQM 314 FD P IE + + GT +SLP +SA++ G + M Sbjct: 450 IPFDYQPGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVM 509 Query: 315 GSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 I G++ ++ + G +P +AP ++ ++NI D +++ +L Sbjct: 510 IHRAILGSIERFIGILTEEYAG---FFPTWLAPVQVVVMNITDSQS---DYVQQVTKKLQ 563 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G D E+IG + L P ++ G K V K+ ++ R Sbjct: 564 DAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTR 611 >gi|307611592|emb|CBX01274.1| threonyl tRNA synthetase [Legionella pneumophila 130b] Length = 637 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 84/396 (21%), Positives = 147/396 (37%), Gaps = 54/396 (13%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G + +R G E+ P L LW +SG + ++ EM Sbjct: 259 APGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKSGHWANFRDEMF- 317 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + ++ P I+ +KSYR+LP + R E G+MR R Sbjct: 318 VTETENRHYAVKPMSCPCHVQIYNHGLKSYRDLPLRLSEFGNCHRCEPSGALHGLMRVRN 377 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFI 211 + DA+ F T + + M ++ G I R P +G D Sbjct: 378 MVQDDAHIF-CTEDQIQSEVAMMLELVQSVYKDFGFTEIKYRLALRPEKRVGSD------ 430 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + D ET + + N ++ D AP + K+ SL Sbjct: 431 DVWDKAETA-------LKLAMQGRNIEWVD------------AP--GEGAFYGPKIECSL 469 Query: 272 PENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVV 325 + +G I+ GT +S+P + A++ DG K V + +G+ Sbjct: 470 SDC---------LGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + GK +W ++P + ++ I + EK+ L K G +D Sbjct: 521 MGILIEHYAGKLPLW---LSPVQAVVLTISEKQN---EYAEKVRKTLQKRGVRANFDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG K V + +V ++ R Sbjct: 575 EKIGFKIREHTLQKIPYLLVVGDKEVENCQVAVRTR 610 >gi|167752565|ref|ZP_02424692.1| hypothetical protein ALIPUT_00818 [Alistipes putredinis DSM 17216] gi|167659634|gb|EDS03764.1| hypothetical protein ALIPUT_00818 [Alistipes putredinis DSM 17216] Length = 494 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 10/193 (5%) Query: 249 VEQWTA-PYAATSDVHNEKL---FDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 VE+W P NE+ D+L E + ++ G + G ++ + Sbjct: 201 VEEWMGVPVIVGHKSPNERFAGAVDTLTIEALMQDGKALQSGTSHFLGQNFAKAFDVQYI 260 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +GK YV S+G+ + R++ A+I + D G++ P +AP ++ LI I ++ R Sbjct: 261 NKEGKLEYVWATSWGV-STRLMGALIMAHSDNNGLVLPPKLAPIQVVLIPIYKGEEQMRQ 319 Query: 364 ACEK---IYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E+ I L G V DD + G +FA +L G P+++ +G + + + +E+ Sbjct: 320 IVERLRTIAEELKSKGLSVKIDDRDNVRSGFKFAEYELKGVPVRLALGPRDLENGTIELV 379 Query: 420 HRLTGIREDMSLE 432 R T +E + E Sbjct: 380 RRDTLEKETVPQE 392 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ + ++ I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEELIVRPTSETIIWNTYKGWIQSYRDLPILCNQWANVVRWEMRTRL-FLRTAEFLWQEG 176 Query: 161 YSFDLTPEGSKHSYNKMFVSYLR 183 ++ T E + +M Y + Sbjct: 177 HTAHATKEEAIEEATRMIHVYQK 199 >gi|296327515|ref|ZP_06870061.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155341|gb|EFG96112.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 637 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 90/447 (20%), Positives = 181/447 (40%), Gaps = 56/447 (12%) Query: 3 RSKYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 R K+ L +++E AE H+ + L + ++ G +LP G + + + R Sbjct: 226 RLKHHLKLMEE----AEKRDHRKLGKELELFFLSEYGPGFPFFLPKGMIVRNVLIDLWRR 281 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E + G ++ P + + +LW SG + +Y +E + ++ ++ P + F+ Sbjct: 282 EHEKAGYQQLETPIMLNKELWEISGHWFNY-RENMYTSEIDELEFAIKPMNCPGGVLAFK 340 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + SY++LP ++ R E G+MR R F D++ F +TP+ + Sbjct: 341 HQLHSYKDLPARLAELGRVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEI---- 395 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 +G+ ++ + S G E+ + T + S++ D + Sbjct: 396 ---------IGVVNLIDKFYSKLFG----FEYEIELSTKPEKAIGSQEIWDMAEAALAGA 442 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYS 295 D + I A Y D K+ D+ +G ++ GT ++ Sbjct: 443 LDKLGRKYKINPGDGAFYGPKLDF---KIKDA-------------IGRMWQCGTIQLDFN 486 Query: 296 LP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 LP T+ G DG+ H V + G++ ++ + G +W +AP ++ ++ Sbjct: 487 LPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMW---LAPVQVKVL 543 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFV 411 + + C ++I +L ++G DD E IG + A+ P+Q+I+G V Sbjct: 544 TL---NDECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGKYKIPMQLIIGKNEV 600 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYA 438 + +V I+ + + SL+E Y Sbjct: 601 ENKEVNIRRFGSKDQFSKSLDEFYTYV 627 >gi|17227831|ref|NP_484379.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120] gi|17129680|dbj|BAB72293.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120] Length = 615 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 8/171 (4%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 Q G+ W P G + +++EQ + G + + P + DL+ SG + Y ++ Sbjct: 224 EQVGPGLPLWTPKGTLLRSTLEQFLQQEQLKRGYLPVVTPHIARVDLFKTSGHWQKYKED 283 Query: 93 MLRL------ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M L A ++ + P + I++S ++SYR LP + +R E Sbjct: 284 MFPLMAEDEAAAAIEQGFVLKPMNCPFHIQIYKSELRSYRELPMRLAEFGTVYRYEQSGE 343 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 G+ R R F + D++ F +TPE + + + L +F L LK+ R Sbjct: 344 LGGLTRVRGFTVDDSHLF-VTPEQLDNEFLNVVDLILSVFKSLQLKNFKAR 393 >gi|260901781|ref|ZP_05910176.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|308108104|gb|EFO45644.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037] Length = 386 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 87/422 (20%), Positives = 159/422 (37%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ +R++ N E+ P + LW SG +D Y Sbjct: 1 MQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDRVLWERSGHWDKYAD 60 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 61 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 119 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + + + + Y + G +I ++ + P +G D Sbjct: 120 RVRGFTQDDAHIFCTESQIQEEVTSCIKMVY-DTYQTFGFDNIVVKLSTRPEKRVGSD-- 176 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S + M+ P I E A Y + L Sbjct: 177 ----EIWDQSEEALKQSLESMEIPY--------------EIQEGEGAFYGPKIEF---TL 215 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + + M I G++ Sbjct: 216 YDCLD-------RAWQCGTV---QLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLER 265 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + L+NI ++I +L K G D Sbjct: 266 FIGILIEEYAG---FFPTWLAPEQAVLMNITDKQS---GYVQEIVQKLQKSGIRAKADLR 319 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++VG + + ++ ++ R +++ I Y S+ Sbjct: 320 NEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISS 379 Query: 445 NR 446 + Sbjct: 380 RK 381 >gi|21243325|ref|NP_642907.1| threonyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] gi|25453288|sp|Q8PJE1|SYT_XANAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21108867|gb|AAM37443.1| threonyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] Length = 634 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 78/394 (19%), Positives = 142/394 (36%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 256 LQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 316 AMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F L P+ + L ++ G I ++ P +G D + Sbjct: 375 RVRGFTQDDGHVFCLEPQ-IESEVTAFHQQALAVYTAFGFDDIQIKIALRPEKRLGDDAT 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A V C ++ + P A Y + H L Sbjct: 434 WDKAEAALRSALGV-CGVEWQELPGEG-------------------AFYGPKIEYH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 471 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G +P +AP ++ + NI D+ K L+ G V D E+ Sbjct: 524 ILIEHHAGA---FPSWLAPVQVVVANITDAQAEYVDSVRKT---LANQGFRVSADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++VG + + V ++ R Sbjct: 578 IGYKIREHTLQRVPYLLVVGDREKENGAVAVRTR 611 >gi|302380527|ref|ZP_07268992.1| threonine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|303234012|ref|ZP_07320661.1| threonine--tRNA ligase [Finegoldia magna BVS033A4] gi|302311470|gb|EFK93486.1| threonine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|302494937|gb|EFL54694.1| threonine--tRNA ligase [Finegoldia magna BVS033A4] Length = 634 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 89/425 (20%), Positives = 158/425 (37%), Gaps = 55/425 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G + P G L+ + ++E+ G ++ P + + LW +SG +D Y + Sbjct: 255 IQEEGPGFPFFHPNGMVVLNELEKFLKEQLLERGYGQIKTPLILNEHLWHQSGHWDHYKE 314 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + +++ + SYR LP ++ R EL G+ Sbjct: 315 NMYFTKIDGEDYAI--KPMNCPGSILVYKDELHSYRELPIKVAELGQVHRHELSGALHGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKM--FVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 R R F+ DA+ F L PE + +K+ F Y I+ + G K Sbjct: 373 FRVRTFVQDDAHVFCL-PEQIEDEVSKIIDFCDY--IYSKFGFK---------------- 413 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + V T S + D I S + I E A Y D H E Sbjct: 414 --YEVELSTRPEDSMGSDEDWDLAISSLKNALEHKGLPYKINEGDGAFYGPKIDFHLEDA 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 +G + GT + +P T+ +DG M I G+ Sbjct: 472 ----------------IGRTWQCGTIQLDFQMPERFDMTYIASDGSKKRPAMIHRAILGS 515 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + GK +W ++P ++ ++ I D ++ ++ G V Sbjct: 516 EERFMGILIEHYAGKFPLW---LSPVQVEILPISDK---FNDYAYELQQKMKARGLRVKV 569 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 DD E+IG + + L +I+G + +++V ++ R G + +E IN Sbjct: 570 DDRSEKIGLKIRESQLKKVNYSLIIGQNEIDNNEVSVRKRDIGDVGSKNTDEFINELVDE 629 Query: 442 FSNNR 446 + N + Sbjct: 630 YQNRK 634 >gi|225551832|ref|ZP_03772775.1| threonyl-tRNA synthetase [Borrelia sp. SV1] gi|225371627|gb|EEH01054.1| threonyl-tRNA synthetase [Borrelia sp. SV1] Length = 581 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 79/411 (19%), Positives = 163/411 (39%), Gaps = 55/411 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG D Y M Sbjct: 205 GLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHVGKSWLWQTSGHLDFYKDSMFAKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 265 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGMMRARGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHE--FI 211 DA+ T ++ + ++ + G ++ + P +G D E Sbjct: 325 QDDAHII-CTHSQVLDEIKEVLRFAIYMWSKFGFSNLKAYLSTKPDKSVGNDSDWEMSLK 383 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 VL +T DF +P E I + A Y D+ K+ DSL Sbjct: 384 VLEET----------LSDFEVPYE------------IDKGGGAFYGPKIDL---KIVDSL 418 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAV 328 ++S + ++LP + T+ DGK+ M +G++ + Sbjct: 419 EREWQMSTIQFD----------FNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGI 468 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G +W ++P ++ +I + + + D K++ + G + D+ ++ Sbjct: 469 LVEHYGGAFPLW---LSPVQVVIIPV---NNIVEDYAIKVFNKFKNEGIRIKLDNSSSRM 522 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR----LTGIREDMSLEEVI 435 ++ P I+G + ++ ++ I+ R + GI+ D +L+ ++ Sbjct: 523 NAKIREYQAKKIPYMFIIGEREATEERISIRTRTNEQINGIKLDEALKFIL 573 >gi|93353957|gb|ABF08046.1| threonyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 663 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 14/201 (6%) Query: 7 FLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + +T + H + + G+ W P G + V +R + Sbjct: 259 YLHMLEE----AEKRDHRRLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLGQ 314 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW SG +D+Y KE + + + + P + IF ++ Sbjct: 315 AGYEEVRTPQVMDRSLWERSGHWDNY-KENMFVTESEKRDYAIKPMNCPGHVQIFNHGLR 373 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVS 180 SYR+LP + R+E G+MR R F+ DA+ F + ++N++ S Sbjct: 374 SYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVEEAKAFNELAFS 433 Query: 181 YLRIFHRLGLKSIPMRAESGP 201 I+ G K + ++ P Sbjct: 434 ---IYDDFGFKDVAVKLSLRP 451 >gi|332295956|ref|YP_004437879.1| threonyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] gi|332179059|gb|AEE14748.1| threonyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] Length = 606 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 91/417 (21%), Positives = 172/417 (41%), Gaps = 49/417 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + G+ W P G + +R+E + G + P + + +W SG +D Y Sbjct: 222 MADEVGAGLILWHPNGGVIRTIIEDYLRKEHVKRGYEIVYTPHMMNLKIWKISGHFDFY- 280 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + + + + + P + I+ S +SYR+LP F+++ +R E G+ Sbjct: 281 KENMYIFENDGQEYAVKPMNCPGHMMIYNSKTRSYRDLPIRFFELGTVYRFERSGALHGL 340 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 +R R F DA+ F T E + + + G K S+ R + G IG D Sbjct: 341 LRVRGFTQDDAHIF-CTNEQLQDEIIGVLNFAKDMMELFGFKYVVSVGTRPD-GSIGTD- 397 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 Q + + + + +N +F+ I++ A Y V + Sbjct: 398 ------------EQWNLATNSLISALKQKNIEFE-------IIDGDGAFYGPKIQV---E 435 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD---GKDHYVQMGSYGIGAM- 322 L D+L ++ + I+V ++LP + AD K V + +G+M Sbjct: 436 LIDAL--GRKWTGPTIQV--------DFALPERFNLEYADKDGTKKRPVMIHRTVVGSME 485 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 R + A+IE+ ++P ++P +I +I +K ++ + E + +LSK V D Sbjct: 486 RFLGALIENYAG----VFPAWLSPIQIIIIPVKEDSELLEYSSE-VEKKLSKEDYRVKVD 540 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 E + + A+L P +++G K + + + ++ R MS+EE + S Sbjct: 541 KRNETLKYRIRDAELNRIPYILVIGKKELDEKLISLRTRGMKDEGQMSIEEFLKRLS 597 >gi|224134713|ref|XP_002327471.1| predicted protein [Populus trichocarpa] gi|222836025|gb|EEE74446.1| predicted protein [Populus trichocarpa] Length = 448 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 68/327 (20%), Positives = 131/327 (40%), Gaps = 69/327 (21%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ +F I SYR+LP Q R E+R + +R+ EFL ++ Sbjct: 67 EEKLVVRPTSETIVNHMFTQWIHSYRDLPLMVNQWANVTRWEMRTK-PFVRTLEFLWQEG 125 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ PE +++ +M Y + + +IP ++ + + Sbjct: 126 HTAHANPEEAENEALQMIDVYTKFAYEQA--AIP----------------VIAGRKSKAE 167 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F D ++ +++ A A TS HN Sbjct: 168 TFAGA--------------DRTYTIEAMMGDRKALQAGTS--HN---------------- 195 Query: 281 GIEVGHIF--YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +G F FGT+ F +G+ +V S+ + + R + +I + D G+ Sbjct: 196 ---LGQNFSRAFGTQ--------FMDENGERQHVWQTSWAV-STRFIGGIIMTHGDDSGL 243 Query: 339 IWPDSVAPFKISLINI-KAHDQVC--RDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAV 394 + P +AP ++ ++ I K D+ +A + L G V DD ++ G +F Sbjct: 244 MLPPKIAPIQVVIVPIWKKEDEKTGVLNAASSVKKVLQSAGIKVKLDDTDQRTPGWKFNF 303 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ G PL++ +G + VS + V I R Sbjct: 304 WEMKGVPLRIEIGPRDVSSASVVISRR 330 >gi|187924732|ref|YP_001896374.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN] gi|238689588|sp|B2SZG2|SYT_BURPP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|187715926|gb|ACD17150.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 635 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 89/424 (20%), Positives = 163/424 (38%), Gaps = 53/424 (12%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + + H S G+ W P G V +R N Sbjct: 231 YLHMLEE----AEKRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVND 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAM--IYGPTHEEVMTDIFRS 120 G +E+ P + LW SG + +Y + M +++ D A+ + P H +V F Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHVQV----FNH 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHS--YNKM 177 ++SYR+LP + + R+E G+MR R F+ DA+ F + S +N + Sbjct: 343 GLRSYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTL 402 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +S ++ G ++ ++ P + E A+ G + + +P E Sbjct: 403 AMS---VYKDFGFDNVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEELPGEG- 458 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 A Y + H + D+L + + +++ G +Y Sbjct: 459 ----------------AFYGPKVEYH---IKDALGRSWQCGTLQLDMVLPERLGAEY--- 496 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + + + + +G+M ++ H G W +AP ++ ++NI A Sbjct: 497 ----VAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAW---LAPMQVVVMNI-AE 548 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 Q + + + L K G V D E+I + L P ++VG K V Sbjct: 549 SQA--EYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVA 606 Query: 418 IKHR 421 ++ R Sbjct: 607 VRAR 610 >gi|186476316|ref|YP_001857786.1| threonyl-tRNA synthetase [Burkholderia phymatum STM815] gi|238691316|sp|B2JJJ7|SYT_BURP8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|184192775|gb|ACC70740.1| threonyl-tRNA synthetase [Burkholderia phymatum STM815] Length = 635 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 15/164 (9%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + + H S G+ W P G V +R N Sbjct: 231 YLHMLEE----AEKRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAM--IYGPTHEEVMTDIFRS 120 G +E+ P + LW SG + +Y M +++ D A+ + P H +V F Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRDNMFTTESEKRDYAIKPMNCPGHVQV----FNH 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 ++SYR+LP + + R+E G+MR R F+ DA+ F Sbjct: 343 GLRSYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIF 386 >gi|84501632|ref|ZP_00999804.1| Threonyl-tRNA synthetase, class IIa [Oceanicola batsensis HTCC2597] gi|84390253|gb|EAQ02812.1| Threonyl-tRNA synthetase, class IIa [Oceanicola batsensis HTCC2597] Length = 659 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 92/442 (20%), Positives = 163/442 (36%), Gaps = 73/442 (16%) Query: 24 KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 KL G+ H + + G W P G + +R +Q G E++ P + LW Sbjct: 250 KLGREMGLFHMQEEAPGQVFWHPNGWTIYTTLQDYVRRKQRAGGYNEINTPQVVDRKLWE 309 Query: 82 ESGRYDSYGKEML-------RLADRNDKAM---------IYGPTHEEVMTDIFRSHIKSY 125 SG ++ Y M R + +D A P + +F +KSY Sbjct: 310 ASGHWEKYQHHMFIVEVDESRDGEHDDAAAKSREHTRINALKPMNCPCHVQVFNQGLKSY 369 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR- 183 R+LP + R E G+MR R F DA+ F T E + + F+ +L Sbjct: 370 RDLPLRLAEFGSCARFEPSGALHGIMRVRGFTQDDAHIF-CTEEQIQEECAR-FIDFLAD 427 Query: 184 IFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 I+ LG +R + P +G + S +++ G + D+ + + F Sbjct: 428 IYRELGFPEFEIRFATRPEKRVGTEESWDYV----EGALENAIKATGHDYVLEPGDGAF- 482 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP 297 Y D + L D+ +G ++ GT +LP Sbjct: 483 ---------------YGPKLDFY---LTDA-------------IGRVWQCGTFQVDPNLP 511 Query: 298 --MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + A + ADG+ H M + G+ ++ +H GK +W +AP ++ + I Sbjct: 512 ERLDAGYIAADGERHRPFMLHRAVLGSFERFIGILIENHAGKLPLW---LAPRQVVVAAI 568 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + D C ++ A+L G D E+I + + P + G K V + Sbjct: 569 VSD---ADDYCREVVAKLQAAGIRAETDLRNEKINYKVREHSVGKVPYILACGMKEVEER 625 Query: 415 KVEIKHRLTGIREDMSLEEVIN 436 V ++ +L+E+++ Sbjct: 626 TVSVRKLGEKQTSGATLDEIVD 647 >gi|268678723|ref|YP_003303154.1| threonyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268616754|gb|ACZ11119.1| threonyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 605 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 9/140 (6%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM-LRL 96 G+ WLP G K + ++ + G + P + +D W SG Y +YG+ M + Sbjct: 231 GLPIWLPQGGKLRAKLEKLLFTAHRKRGYQPVRGPEILKSDAWKISGHYQNYGENMYFTV 290 Query: 97 ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D + YG P + +F+S ++SYR+LP F++ + R E G+ R R Sbjct: 291 IDEAE----YGIKPMNCLGHIKVFQSEVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVR 346 Query: 154 EFLMKDAYSFDLTPEGSKHS 173 EF DA+ F TP+ K + Sbjct: 347 EFTQDDAHIF-CTPDQIKEN 365 >gi|284048337|ref|YP_003398676.1| threonyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] gi|283952558|gb|ADB47361.1| threonyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] Length = 636 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 94/426 (22%), Positives = 165/426 (38%), Gaps = 55/426 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ + G +LP G + + RE + G E+ P + + LW SG +D Y Sbjct: 256 MLSDYGPGFPFFLPNGMIIRNTLIDYWREVHRKYGYQEVMTPMIMNRQLWETSGHWDHYK 315 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M D +D A+ P + ++ + SY+ LP ++ L R EL G Sbjct: 316 ENMYFTQIDGDDYAI--KPMNCPGGMLVYANEPHSYKELPLRVGELGLVHRHELSGALHG 373 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGD 205 + R R F DA+ F + P + + + ++ GL + R ++ +G D Sbjct: 374 LFRVRCFTQDDAHIF-MMPNQIEDVIQETIRLFDEVYATFGLTYHAELSTRPDNS-MGDD 431 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + E A K DF + SI E A Y D H Sbjct: 432 ATWEMTTNA--------LRKAMDDFGLKY------------SINEGDGAFYGPKIDFH-- 469 Query: 266 KLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGA 321 L DS+ R + G I K++L T+ G DG+ H V + G+ Sbjct: 470 -LKDSI-------GRTWQCGTIQLDMLLPEKFNL----TYTGEDGQKHRPVMIHRVVYGS 517 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVF 380 + ++ ++ G W +AP ++ ++ I +++ + +K+ A+ + Sbjct: 518 IERFIGILIENYAGAFPAW---LAPEQVRVMPITDKYNEYAKQIVDKLEAQKIRAHL--- 571 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 DD E++G + A + P +IVG K V V ++ R G + M ++E I Sbjct: 572 -DDRNEKVGYKIREAQVKKVPYMLIVGEKEVESGTVSVRSRDNGEQGAMPVDEFIAKLQD 630 Query: 441 RFSNNR 446 N + Sbjct: 631 EIKNRK 636 >gi|163746007|ref|ZP_02153366.1| threonyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] gi|161380752|gb|EDQ05162.1| threonyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] Length = 648 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 79/399 (19%), Positives = 140/399 (35%), Gaps = 50/399 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q + G +E++ P + LW SG ++ Y Sbjct: 260 MQEEAPGQIFWHPNGWSIYTQLQDYMRRQQRKGGYVEVNTPQVVDRKLWEASGHWEKYQD 319 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF +KSYR+LP + R E Sbjct: 320 HMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGG 204 G+MR R F D + F E + F+++L I+ LG ++ ++ P Sbjct: 380 LHGIMRVRGFTQDDGHIF--CAEDQIEAETAKFIAFLSEIYRDLGFENFKVKFSDRPEKR 437 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD---DIISLNSIVEQWTAPYAATSD 261 S E A+ + P E + + + ++I W Sbjct: 438 SGSDEVWDKAEAALLSATRAAGIEPELNPGEGAFYGPKLEFVLTDAIGRDWQCGTHQVDF 497 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIG 320 V LPE + AT+ GADG H V + +G Sbjct: 498 V--------LPER-----------------------LDATYIGADGGKHRPVMLHRATLG 526 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + ++ H GK W +AP ++ + +I + D ++ L G Sbjct: 527 SFERFIGILIEEHAGKLPFW---LAPRQVVVASITSE---ADDYVAEVVETLKAAGVRAE 580 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + + P+ + VG++ V + V ++ Sbjct: 581 ADMRNEKINYKVREHSVGKVPVILAVGAREVEERTVSVR 619 >gi|153217256|ref|ZP_01951020.1| threonyl-tRNA synthetase [Vibrio cholerae 1587] gi|124113711|gb|EAY32531.1| threonyl-tRNA synthetase [Vibrio cholerae 1587] Length = 410 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR++ N G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 376 RVRGFTQDDAHIF 388 >gi|300173545|ref|YP_003772711.1| threonyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] gi|299887924|emb|CBL91892.1| Threonyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] Length = 655 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 83/393 (21%), Positives = 154/393 (39%), Gaps = 48/393 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G V I +++ G + P L + +L+ SG +D Y ++M Sbjct: 266 GLPVWLPNGATIRRQVERYITDKELANGYQHVYTPVLSNLNLYKTSGHWDHYREDMFPPM 325 Query: 98 DRNDKAMI-----YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D D + P+H +M +F+ +SYR LP ++ + R E G+ R Sbjct: 326 DMGDGEFLELRPMNCPSH--IM--VFKHKPRSYRELPIRIAELGMMHRYEKSGALTGLSR 381 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE + D ++F + PE + + + + ++ + R LS+ Sbjct: 382 VREMTLNDGHTF-VEPEKIEEEFKSILTMMMAVYRDFNITDYRFR---------LSYR-- 429 Query: 212 VLADTGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D T+ + D M + + DD+ E A Y DV + + Sbjct: 430 ---DPKNTEKYFDDDEMWEKSQAQLKSAMDDLKLDYYEAEGEAAFYGPKLDVQTKT---A 483 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAV 328 L + +S ++ F ++ L T+ GADG+D++ V + +G M A Sbjct: 484 LGNEETMSTIQLD----FLLPERFDL----TYIGADGQDNHRPVMLHRGIVGTMERFTAY 535 Query: 329 IESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + + G W ++P ++ +I N+ AH + D +K +L VG + Sbjct: 536 LIEMYKGAFPTW---LSPLQVQIIPVNLGAHGEYA-DGVQK---KLQAVGLRANVETKEA 588 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++G A P +++G V V ++ Sbjct: 589 KMGYLIREAQTNKIPYTLVLGDSEVDAQTVTVR 621 >gi|261749266|ref|YP_003256951.1| threonyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497358|gb|ACX83808.1| threonyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 408 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 4/163 (2%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-- 95 G+ WLP G N+ + + Q ++G + P + L+V SG +D YGK+ + Sbjct: 30 GLPLWLPRGTIFRRNLEEFLTDIQKKSGYEMIMTPHIGHKKLYVRSGHWDKYGKDSFKPI 89 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +++ + P + +++RS SYR+LP F + +R E G+ R R Sbjct: 90 QTPHSEEEFLLKPMNCPHHCEVYRSQEWSYRDLPKRFAEFGTVYRYEQSGELHGLTRVRC 149 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 F DA+ F T + + K+ +F RLG +R Sbjct: 150 FTQDDAHIF-CTYDQLLEEFKKVINLVFYVFRRLGFLEYTIRV 191 >gi|260681819|ref|YP_003213104.1| prolyl-tRNA synthetase [Clostridium difficile CD196] gi|260685416|ref|YP_003216549.1| prolyl-tRNA synthetase [Clostridium difficile R20291] gi|260207982|emb|CBA60134.1| putative dual-specificity prolyl/cysteinyl-tRNA synthetase [Clostridium difficile CD196] gi|260211432|emb|CBE01531.1| putative dual-specificity prolyl/cysteinyl-tRNA synthetase [Clostridium difficile R20291] Length = 510 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 2/155 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF +G S+G + R++ +I + D +G+ Sbjct: 255 GKALQSGTSHFLGQHFTKAFDITFADREGNLANPYHTSWG-ASTRLIGGLIMTHSDNRGL 313 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 + P VAP ++ ++ I A + +KIYA L G V DD G +F ++ Sbjct: 314 VLPPRVAPIQVVIVPIAAKKGNVMETVDKIYADLKTKGVAVEVDDRDNYTTGWKFNEWEM 373 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G P++V +G K + +++ + R T ++ M LE Sbjct: 374 KGAPVRVEIGPKDIENNQAMVFRRDTLEKDSMPLE 408 >gi|62897187|dbj|BAD96534.1| threonyl-tRNA synthetase-like 1 variant [Homo sapiens] Length = 718 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 100/434 (23%), Positives = 166/434 (38%), Gaps = 72/434 (16%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E G E+ PT Sbjct: 296 EAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPT 355 Query: 74 LQSADLWVESGRYDSYGKEMLRL----ADRNDKA------------MIYGPTHEEVMTDI 117 L S LW +SG ++ Y ++M + +DR + + P + + Sbjct: 356 LFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLM 415 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-----GSK 171 F +S+R LP R E G+ R R F DA+ F T + S Sbjct: 416 FAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSC 475 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + + + L RL L + P SG +G C D + Sbjct: 476 LDFLRSVYAVLGFSFRLALSTRP----SGFLGDP-----------------CLWDQAEQV 514 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 + +F + LNS A Y DVH L D+L R + G I Sbjct: 515 LKQALKEFGEPWDLNSGD---GAFYGPKIDVH---LHDAL-------GRPHQCGTI---Q 558 Query: 292 TKYSLPM--SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 + LP+ +KG G V + +G++ + V+ S GK WP ++PF+ Sbjct: 559 LDFQLPLRFDLQYKGQAGALGRPVLIHRAVLGSVERLLGVLAESCGGK---WPLWLSPFQ 615 Query: 349 ISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + +I + + ++ ++A + + A D D G + + A L + Q +VG Sbjct: 616 VVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDA---DSGLTLSRRIRRAQLAHYNFQFVVG 672 Query: 408 SKFVSDSKVEIKHR 421 K S V I+ R Sbjct: 673 QKEQSKRTVNIRTR 686 >gi|326203342|ref|ZP_08193207.1| prolyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325986600|gb|EGD47431.1| prolyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 478 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 63/316 (19%), Positives = 123/316 (38%), Gaps = 66/316 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E + + + + I+SYR+LP + Q +++ RP +R+ EFL ++ ++ Sbjct: 114 PTSETLFCEHYSNSIQSYRDLPKLYNQWCSVVRWEKTTRP---FLRTLEFLWQEGHTAHA 170 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 T E ++ KM Y + + +IP+ Sbjct: 171 TAEEAQEETIKMLNVYADVLE--NVLAIPV------------------------------ 198 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 I TD + + A Y S +H+ K S G Sbjct: 199 ------IKGRKTDKEKFAGAH-------ATYTIESLMHDGKALQS--------------G 231 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 FG ++ + + + YV S+G+ R++ A+I D G++ P +VA Sbjct: 232 TSHNFGDGFAKAFDIQYTDKNNQLQYVHQTSWGV-TTRLIGAIIMVHGDDSGLVLPPAVA 290 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P ++ +I + H + + ++ RLS V DD + G +F+ ++ G P+++ Sbjct: 291 PTQLIIIPVSQHKEGVLEKANELKDRLS-AKFRVKMDDSDKMPGWKFSEYEMKGVPMRLE 349 Query: 406 VGSKFVSDSKVEIKHR 421 +G K + ++ + R Sbjct: 350 IGPKDIEKNQAVLVRR 365 >gi|254304252|ref|ZP_04971610.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324444|gb|EDK89694.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 637 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 90/447 (20%), Positives = 182/447 (40%), Gaps = 56/447 (12%) Query: 3 RSKYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 R K L +++E AE H+ + L + ++ G +LP G + + + R+ Sbjct: 226 RLKKHLKLMEE----AEKRDHRKLGKELELFFLSEYGPGFPFFLPKGMVIRNVLIDLWRK 281 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E + +++ P + + +LW SG + +Y +E + ++ ++ P + F+ Sbjct: 282 EHEKAKYLQLETPIMLNKELWEVSGHWFNY-RENMYTSEIDELEFAIKPMNCPGGVLSFK 340 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + SY++LP ++ R E G+MR R F D++ F +TP+ + Sbjct: 341 HQLHSYKDLPARLAELGRVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEI---- 395 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 +G+ ++ + S G E+ + T + S++ D + Sbjct: 396 ---------IGVVNLIDKFYSKLFG----FEYEIELSTKPEKAIGSQEIWDMAEAALAGA 442 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYS 295 D + I A Y D K+ D+ +G ++ GT ++ Sbjct: 443 LDKLGRKYKINPGDGAFYGPKLDF---KIKDA-------------IGRMWQCGTIQLDFN 486 Query: 296 LP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 LP T+ G DG+ H V + G++ ++ + G +W +AP ++ ++ Sbjct: 487 LPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMW---LAPVQVKVL 543 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFV 411 + + C ++I +L ++G DD E IG + A+ P+Q+I+G V Sbjct: 544 TL---NDECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGRYKIPMQLIIGKNEV 600 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYA 438 + +V I+ + + SL+E NY Sbjct: 601 ENKEVNIRRFGSKDQFSKSLDEFYNYV 627 >gi|85059397|ref|YP_455099.1| threonyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans'] gi|123738953|sp|Q2NT31|SYT_SODGM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|84779917|dbj|BAE74694.1| threonyl-tRNA synthase [Sodalis glossinidius str. 'morsitans'] Length = 642 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 84/414 (20%), Positives = 153/414 (36%), Gaps = 44/414 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y + Sbjct: 256 MQEEAPGMVFWHNDGWTLFRELETFVRMKLKAYQYQEVKGPFMMDRVLWEKTGHWDNYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T + + N ++ G + I ++ + P Sbjct: 375 RVRGFTQDDAHIF-CTEDQVRDEVNNCIKMVYDMYGTFGFEKILVKLSTRP--------- 424 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-KLFD 269 G V+ + D ++ N I ++ A E L D Sbjct: 425 --EKRIGSNDVWGRAE----------QDLAAALTENGIAFEYQPGEGAFYGPKIEFTLLD 472 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVA 326 L R + G + +SLP ++A++ G + + M I G+M Sbjct: 473 CLD-------RAWQCGTV---QLDFSLPGRLNASYVGENNERVVPVMIHRAILGSMERFI 522 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ + G +P + P ++ ++NI + + K+ +LS G V D E Sbjct: 523 GILTEEYAG---FYPTWLVPTQVVVMNITDNQS---EYVAKLTEKLSAAGIRVKADLRNE 576 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +IG + L P ++ G K V KV ++ R + + E+I H Sbjct: 577 KIGFKIREHTLRRVPYMLVCGDKEVEACKVAVRTRRGKDLGSIDVNEIITKLQH 630 >gi|238787089|ref|ZP_04630889.1| Threonyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] gi|238724877|gb|EEQ16517.1| Threonyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] Length = 642 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 83/398 (20%), Positives = 147/398 (36%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHVF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 D +E+ D ++ N I + A E Sbjct: 432 ---------------------DLWTRAED-DLAAALTENGIPFDYQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L D L R + G + +SLP +SA++ G + M I G+M Sbjct: 470 LHDCLD-------RAWQCGTV---QLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSME 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++NI D +++ +L G D Sbjct: 520 RFIGILTEEYAG---FFPTWLAPVQVVVMNITDSQS---DYVQQVTKKLQDAGIRAKADL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V K+ ++ R Sbjct: 574 RNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTR 611 >gi|46447649|ref|YP_009014.1| threonyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] gi|73919812|sp|Q6M9L0|SYT_PARUW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|46401290|emb|CAF24739.1| probable threonine-tRNA ligase [Candidatus Protochlamydia amoebophila UWE25] Length = 650 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 22/217 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRT------GMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 Y + + RD ++ KL L + GM H KG+ W + + A IRE Sbjct: 235 YLHQLEEAKKRDHKLLGAKLDLFSLKEEAPGMPFIHPKGLIVW--------NQLVAYIRE 286 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 +R IE+ PT+ + +LW SG + +Y + M ++ D+ P + ++ Sbjct: 287 CLSRHDYIEIKTPTMMTKELWEISGHWGNYRQNMF-ISQIEDRDFAIKPMNCPGCMLYYK 345 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 SH SYR LP +I R E G+ R R F DA+ F + P + + Sbjct: 346 SHTHSYRELPLRIAEIGNVHRYEPSGSLSGLFRVRSFHQDDAHIF-MKPSDIQQEILGVL 404 Query: 179 VSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFIV 212 I+ GL + R E IG D HE+ V Sbjct: 405 ALADEIYSTFGLSYRLELSTRPEKNTIGTD--HEWEV 439 >gi|238797380|ref|ZP_04640880.1| Threonyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] gi|238718811|gb|EEQ10627.1| Threonyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] Length = 642 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 83/408 (20%), Positives = 145/408 (35%), Gaps = 70/408 (17%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA--ATSDVHNE 265 EQWT + A + N Sbjct: 432 ------------------------------------------EQWTRAESDLAAALTENG 449 Query: 266 KLFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGADGKDHYVQM 314 FD P IE + + GT +SLP +SA++ G + M Sbjct: 450 IPFDYQPGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVM 509 Query: 315 GSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 I G++ ++ + G +P +AP ++ ++NI D +++ +L Sbjct: 510 IHRAILGSIERFIGILTEEYAG---FFPTWLAPVQVVVMNITDSQS---DYVQQVTKKLQ 563 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G D E+IG + L P ++ G K V K+ ++ R Sbjct: 564 DAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTR 611 >gi|296449824|ref|ZP_06891591.1| proline--tRNA ligase [Clostridium difficile NAP08] gi|296877888|ref|ZP_06901908.1| proline--tRNA ligase [Clostridium difficile NAP07] gi|296261311|gb|EFH08139.1| proline--tRNA ligase [Clostridium difficile NAP08] gi|296431085|gb|EFH16912.1| proline--tRNA ligase [Clostridium difficile NAP07] Length = 510 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 2/155 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ TF +G S+G + R++ +I + D +G+ Sbjct: 255 GKALQSGTSHFLGQHFTKAFDITFADREGNLANPYHTSWG-ASTRLIGGLIMTHSDNRGL 313 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 + P VAP ++ ++ I A + +KIYA L G V DD G +F ++ Sbjct: 314 VLPPRVAPIQVVIVPIAAKKGNVMETVDKIYADLKAKGVAVEVDDRDNYTTGWKFNEWEM 373 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G P+++ +G K + +++ + R T ++ M LE Sbjct: 374 KGVPVRIEIGPKDIENNQAMVFRRDTLEKDSMPLE 408 >gi|291060195|gb|ADD72930.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Chicago] Length = 582 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 97/426 (22%), Positives = 162/426 (38%), Gaps = 65/426 (15%) Query: 24 KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 KL G+ H + + G W P G + +R + G E+ P + LW Sbjct: 186 KLGPALGLFHLDEENPGQVFWHPEGWTLYVAIQQYLRRVMHEDGYAEVHTPFVMPQSLWE 245 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 SG +D Y M L + ++ P + +IF+ +SYR+LP + R+ Sbjct: 246 RSGHWDKYRANMY-LTEGEKRSFALKPMNCPGHVEIFKQKTRSYRDLPLRLSEFGSCTRN 304 Query: 142 ELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGL--KSIPMRA 197 E GVMR R F+ DA+ F E S F L R++ G + I ++ Sbjct: 305 EPSGSLHGVMRVRGFVQDDAHIF--CTEAQIASEVTRFCRLLARVYADFGFAQEQIRVKF 362 Query: 198 ESGP---IGGDLSHEFI--VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 + P IG D + + LA+ E + P E + + Sbjct: 363 STRPEQRIGDDATWDRAERALAEACEAAGLSYEH-----APGEGAFYGPKLEF------- 410 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP----MSATFKGADGK 308 L D+L R + G I Y LP ++A + G D + Sbjct: 411 -------------ALIDTL-------EREWQCGTI---QVDYQLPSCERLNAEYVGEDNQ 447 Query: 309 DHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDAC 365 H V + IG++ R + +IE G +P +AP + +I + A + + Sbjct: 448 RHMPVILHRTVIGSLERFIGILIEHY----GGAFPPWLAPVQAVVIPVAPAFLEYAQHVA 503 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 ++ AR +V DV E++ ++ A P +IVG + + +V ++ R TG Sbjct: 504 RELCARSLRVQADV----SAERMNAKIRTAQTQKVPYLLIVGERELRAQQVAVRPR-TGP 558 Query: 426 REDMSL 431 + M L Sbjct: 559 QHSMGL 564 >gi|169824388|ref|YP_001691999.1| threonyl-tRNA synthetase [Finegoldia magna ATCC 29328] gi|238687735|sp|B0S169|SYT_FINM2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|167831193|dbj|BAG08109.1| threonyl-tRNA synthetase [Finegoldia magna ATCC 29328] Length = 634 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 89/425 (20%), Positives = 157/425 (36%), Gaps = 55/425 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G + P G L+ + ++E+ G ++ P + + LW +SG +D Y + Sbjct: 255 IQEEGPGFPFFHPNGMVVLNELEKFLKEQLLERGYGQIKTPLILNEHLWHQSGHWDHYKE 314 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + +++ + SYR LP ++ R EL G+ Sbjct: 315 NMYFTKIDGEDYAI--KPMNCPGSILVYKDELHSYRELPIKVAELGQVHRHELSGALHGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKM--FVSYLRIFHRLGLKSIPMRAESGPIGGDLS 207 R R F+ DA+ F L PE + +K F Y I+ + G K Sbjct: 373 FRVRTFVQDDAHVFCL-PEQIEEEVSKTIDFCDY--IYSKFGFK---------------- 413 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + V T S + D I S + I E A Y D H E Sbjct: 414 --YEVELSTRPEDSMGSDEDWDLAISSLKNALEHKGLPYKINEGDGAFYGPKIDFHLEDA 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 +G + GT + +P T+ +DG M I G+ Sbjct: 472 ----------------IGRTWQCGTIQLDFQMPERFDMTYIASDGSKKRPAMIHRAILGS 515 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + GK +W ++P ++ ++ I D ++ ++ G V Sbjct: 516 EERFMGILIEHYAGKFPLW---LSPVQVEILPISDK---FNDYAYELQQKMKARGLRVKV 569 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 DD E+IG + + L +I+G + +++V ++ R G + +E IN Sbjct: 570 DDRSEKIGLKIRESQLKKVNYSLIIGQNEIDNNEVSVRKRDIGDVGSKNTDEFINELVDE 629 Query: 442 FSNNR 446 + N + Sbjct: 630 YQNRK 634 >gi|291566329|dbj|BAI88601.1| threonyl-tRNA synthetase [Arthrospira platensis NIES-39] Length = 622 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 83/404 (20%), Positives = 156/404 (38%), Gaps = 47/404 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ + G + P + + LW SG YD Y + M Sbjct: 244 GLVFWHPKGSRMRLLIEDYWRQAHLQGGYELLYTPHIANLALWKTSGHYDFYRENMFDQI 303 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +++ P + ++SH+ SYR LP + ++ +R E G+MR R F Sbjct: 304 EIENQSYQLKPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYERSGVLHGLMRVRGFT 363 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ F L PE + +I G + + P +G D Sbjct: 364 QDDAHIFCL-PEQVADEILGVLNLTEKILSDFGFSKYEVNLSTRPSKSVGND-------- 414 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 G Q+ D I + N D + + E A Y D+ K+ D++ Sbjct: 415 ---GVWQLAT-----DALISALNIKGWDYV----VDEGGGAFYGPKIDI---KIQDAIAR 459 Query: 274 NKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIE 330 + S ++ ++LP + + ADG M I G++ ++ Sbjct: 460 LWQCSTIQVD----------FNLPERFNMEYVAADGSRQRPIMIHRAIFGSLERFFGILI 509 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 ++ G +W +AP + ++ + RD + I L + D+ GE++G Sbjct: 510 ENYAGDFPLW---LAPVMVRVLVVSDR---FRDYAKSIVQSLKQQNIRAEVDNTGERLGK 563 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 Q +L P+ V++G + + + + ++ R G M+L ++ Sbjct: 564 QIRACELEKIPVTVVIGQRELDNQSLSVRTRSRGDIGTMTLPQL 607 >gi|15639823|ref|NP_219273.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Nichols] gi|189026061|ref|YP_001933833.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|6094415|sp|O83809|SYT_TREPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238689347|sp|B2S475|SYT_TREPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|3323150|gb|AAC65804.1| threonyl-tRNA synthetase (thrS) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018636|gb|ACD71254.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] Length = 592 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 97/426 (22%), Positives = 162/426 (38%), Gaps = 65/426 (15%) Query: 24 KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 KL G+ H + + G W P G + +R + G E+ P + LW Sbjct: 196 KLGPALGLFHLDEENPGQVFWHPEGWTLYVAIQQYLRRVMHEDGYAEVHTPFVMPQSLWE 255 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 SG +D Y M L + ++ P + +IF+ +SYR+LP + R+ Sbjct: 256 RSGHWDKYRANMY-LTEGEKRSFALKPMNCPGHVEIFKQKTRSYRDLPLRLSEFGSCTRN 314 Query: 142 ELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGL--KSIPMRA 197 E GVMR R F+ DA+ F E S F L R++ G + I ++ Sbjct: 315 EPSGSLHGVMRVRGFVQDDAHIF--CTEAQIASEVTRFCRLLARVYADFGFAQEQIRVKF 372 Query: 198 ESGP---IGGDLSHEFI--VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 + P IG D + + LA+ E + P E + + Sbjct: 373 STRPEQRIGDDATWDRAERALAEACEAAGLSYEH-----APGEGAFYGPKLEF------- 420 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP----MSATFKGADGK 308 L D+L R + G I Y LP ++A + G D + Sbjct: 421 -------------ALIDTL-------EREWQCGTI---QVDYQLPSCERLNAEYVGEDNQ 457 Query: 309 DHY-VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDAC 365 H V + IG++ R + +IE G +P +AP + +I + A + + Sbjct: 458 RHMPVILHRTVIGSLERFIGILIEHY----GGAFPPWLAPVQAVVIPVAPAFLEYAQHVA 513 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 ++ AR +V DV E++ ++ A P +IVG + + +V ++ R TG Sbjct: 514 RELCARSLRVQADV----SAERMNAKIRTAQTQKVPYLLIVGERELRAQQVAVRPR-TGP 568 Query: 426 REDMSL 431 + M L Sbjct: 569 QHSMGL 574 >gi|332967807|gb|EGK06908.1| threonine--tRNA ligase [Desmospora sp. 8437] Length = 295 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 2/162 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ WLP G + I +++ R G + P L S +L+ SG +D Y ++M Sbjct: 16 GQGLPLWLPNGATIRRIIERYIIDKEERLGYQHVYTPHLASVELYKISGHWDHYHEDMYP 75 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +++ ++ P + I+++ +KSYRNLP ++ + R E+ G+ R R Sbjct: 76 PMKMDNEELVLRPMNCPHHMMIYKNDLKSYRNLPVRIAELGMMHRHEMSGALSGLQRVRA 135 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 + DA+ F P+ K + ++ ++ G+K R Sbjct: 136 MTLNDAHIF-CRPDQIKSEFIRVVQLIEEVYRDFGIKDFWYR 176 >gi|282882529|ref|ZP_06291150.1| threonine--tRNA ligase [Peptoniphilus lacrimalis 315-B] gi|281297671|gb|EFA90146.1| threonine--tRNA ligase [Peptoniphilus lacrimalis 315-B] Length = 636 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 86/420 (20%), Positives = 161/420 (38%), Gaps = 54/420 (12%) Query: 13 ENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 E +AE H+ + L +H+ G + P G +N+ + + G E+ Sbjct: 232 EKREEAEKRDHRKLGRELDLFSMHEEGPGFPFFHPNGMITRNNLLSWWKNVLQERGYGEI 291 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + + DLW SG +D Y KE + + +++ P + T I+ + SYR+LP Sbjct: 292 LTPVILNEDLWHRSGHWDHY-KENMYFTEIDEEGYAVKPMNCPGSTLIYSTTPHSYRDLP 350 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + + L R EL G+ R R F DA+ + L + + + ++ L ++ Sbjct: 351 LRYAEFGLVHRHELSGALHGLFRVRSFTQDDAHIYCLPNQIKSEVFEIIDLANL-LYDTF 409 Query: 189 GLK-SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G K S+ + GD L E + + + +P + Sbjct: 410 GFKYSVELSTRPDDYMGD-------LGSWNEAEKALKEALEEKGMPY------------T 450 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLPMS--ATF 302 I E A Y D H E +G + GT + LP + T+ Sbjct: 451 INEGDGAFYGPKIDYHLEDA----------------IGRTWQCGTIQLDFQLPQNFELTY 494 Query: 303 KGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG K V + G++ ++ GK +W ++P ++ +I + + Sbjct: 495 VAEDGSKKRPVMLHRALFGSVERFMGILIEHFAGKFPLW---LSPVQVEIIPV---SEKF 548 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +++ +L K G V D+ E++G + A L +++G K K+ ++ R Sbjct: 549 KPYAGEVFDQLKKAGIRVKIDERAEKVGYKIREAQLKKVNYMLVIGEKETESHKLSVRKR 608 >gi|33519811|ref|NP_878643.1| threonyl-tRNA synthetase [Candidatus Blochmannia floridanus] gi|33504156|emb|CAD83418.1| threonyl-tRNA synthetase [Candidatus Blochmannia floridanus] Length = 410 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 8/193 (4%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D SH+L L + + + G+ W G + IR++ + E+ PT+ Sbjct: 11 DHRNLSHQLDLYH--LQEDAPGMVFWHVNGWTIFQELKNFIRKKLQQYQYQEVKSPTMID 68 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 LW ++G +D+Y + + N K I P + IF +K+Y++LP + Sbjct: 69 RVLWKKTGHWDNYYEHIFTTDSENRKYCI-KPMNCPGHIQIFNHGLKTYKDLPIRMAEFG 127 Query: 137 LKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 R+EL G+MR REF DA+ F + Y+ + + Y I+H K I + Sbjct: 128 SCHRNELSGSLHGLMRIREFTQDDAHIFCALTQIPNELYHCIKMMY-DIYHVFNFKKIIV 186 Query: 196 RAESGP---IGGD 205 + + P IG D Sbjct: 187 KLSTRPKKRIGED 199 >gi|15595065|ref|NP_212854.1| threonyl-tRNA synthetase [Borrelia burgdorferi B31] gi|218249246|ref|YP_002375218.1| threonyl-tRNA synthetase [Borrelia burgdorferi ZS7] gi|223889476|ref|ZP_03624062.1| threonyl-tRNA synthetase [Borrelia burgdorferi 64b] gi|8928363|sp|O51662|SYT_BORBU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701542|sp|B7J0G5|SYT_BORBZ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2688663|gb|AAC67076.1| threonyl-tRNA synthetase (thrZ) [Borrelia burgdorferi B31] gi|218164434|gb|ACK74495.1| threonyl-tRNA synthetase [Borrelia burgdorferi ZS7] gi|223885162|gb|EEF56266.1| threonyl-tRNA synthetase [Borrelia burgdorferi 64b] gi|312147875|gb|ADQ30534.1| threonyl-tRNA synthetase [Borrelia burgdorferi JD1] Length = 581 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 78/409 (19%), Positives = 158/409 (38%), Gaps = 51/409 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG D Y M Sbjct: 205 GLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 265 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGMMRARGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHE--FI 211 DA+ T ++ + ++ + G + + P +G D E Sbjct: 325 QDDAHII-CTHSQVLDEIKEVLRFAIYMWSKFGFSNPKAYLSTKPDKSVGNDSDWEMSLK 383 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 VL +T DF +P E I + A Y D+ K+ DSL Sbjct: 384 VLEET----------LSDFEVPYE------------IDKGGGAFYGPKIDL---KIVDSL 418 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAV 328 ++S + ++LP + T+ DGK+ M +G++ + Sbjct: 419 EREWQMSTIQFD----------FNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGI 468 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G +W ++P ++ +I + + + D K++ + G + D+ ++ Sbjct: 469 LVEHYGGAFPLW---LSPVQVVIIPV---NNIVEDYAIKVFNKFKNEGIRIKLDNSSSRM 522 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ P I+G + ++ ++ I+ R M L+E + + Sbjct: 523 NAKIREYQAKKIPYMFIIGEREATEERISIRTRTNEQINGMKLDEALKF 571 >gi|161621305|ref|YP_583315.2| threonyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 635 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 16/202 (7%) Query: 7 FLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + +T + H + + G+ W P G + V +R + Sbjct: 231 YLHMLEE----AEKRDHRRLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLGQ 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW SG +D+Y KE + + + + P + IF ++ Sbjct: 287 AGYEEVRTPQVMDRSLWERSGHWDNY-KENMFVTESEKRDYAIKPMNCPGHVQIFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEG---SKHSYNKMFV 179 SYR+LP + R+E G+MR R F+ DA+ F T E ++N++ Sbjct: 346 SYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIF-CTEEQIVEEAKAFNELAF 404 Query: 180 SYLRIFHRLGLKSIPMRAESGP 201 S I+ G K + ++ P Sbjct: 405 S---IYDDFGFKDVAVKLSLRP 423 >gi|17232215|ref|NP_488763.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120] gi|17133860|dbj|BAB76422.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120] Length = 612 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 90/403 (22%), Positives = 161/403 (39%), Gaps = 39/403 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+ +G + P + + DLW SG +D Y + M Sbjct: 237 GLVFWHPKGASIRYIIEDYWRKCHLESGYQLLYTPHVANLDLWKTSGHFDFYQENMFDSM 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++A P + ++ + SYR LP + ++ +R E G+MR R F Sbjct: 297 EVENQAYQIKPMNCPFHVLTYKHQLHSYRELPLRWAELGTVYRYERSGALHGLMRVRGFT 356 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F L + + + ++ I G K+ + + P ++E LA + Sbjct: 357 QDDAHIFCLPHQIADEILGVLNLTE-HILSDFGFKNYEVNLSTRPDKSVGNNEVWELATS 415 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENK 275 Q +K + N IV E A Y D+ K+ D++ Sbjct: 416 ALRQALDAKGW------------------NYIVDEGGGAFYGPKIDI---KIQDAIGRLW 454 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHD 334 + S ++ F ++ + AT DG M I G++ ++ ++ Sbjct: 455 QCSTIQVD----FNLPERFDMEYIAT----DGSRQRPIMIHRAIFGSLERFFGILIENYA 506 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 G +W +AP +I L+ + D V R E + L K G V D GE++G Q Sbjct: 507 GDFPLW---LAPVQIRLLPVS--DDV-RGYTESVAIALQKDGFRVEIDISGERLGKQIRT 560 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 A+L P+ +VG K V + + ++ R G ++L ++ N+ Sbjct: 561 AELEKIPVVGVVGKKEVENQNLSVRTRANGDLGAINLNDLTNH 603 >gi|226321417|ref|ZP_03796944.1| threonyl-tRNA synthetase [Borrelia burgdorferi Bol26] gi|226233213|gb|EEH31965.1| threonyl-tRNA synthetase [Borrelia burgdorferi Bol26] Length = 581 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 78/409 (19%), Positives = 158/409 (38%), Gaps = 51/409 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG D Y M Sbjct: 205 GLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 265 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGMMRARGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHE--FI 211 DA+ T ++ + ++ + G + + P +G D E Sbjct: 325 QDDAHII-CTHSQVLDEIKEVLRFAIYMWSKFGFSNPKAYLSTKPDKSVGNDSDWEMSLK 383 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 VL +T DF +P E I + A Y D+ K+ DSL Sbjct: 384 VLKET----------LSDFEVPYE------------IDKGGGAFYGPKIDL---KIVDSL 418 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAV 328 ++S + ++LP + T+ DGK+ M +G++ + Sbjct: 419 EREWQMSTIQFD----------FNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGI 468 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G +W ++P ++ +I + + + D K++ + G + D+ ++ Sbjct: 469 LVEHYGGAFPLW---LSPVQVVIIPV---NNIVEDYAIKVFNKFKNEGIRIKLDNSSSRM 522 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ P I+G + ++ ++ I+ R M L+E + + Sbjct: 523 NAKIREYQAKKIPYMFIIGEREATEERISIRTRTNEQINGMKLDEALKF 571 >gi|119897370|ref|YP_932583.1| threonyl-tRNA synthetase [Azoarcus sp. BH72] gi|166223320|sp|A1K4E1|SYT_AZOSB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119669783|emb|CAL93696.1| ThrS protein [Azoarcus sp. BH72] Length = 638 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 16/181 (8%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H+KG W V +R +R G E+ P + LW +SG + Y Sbjct: 261 GMVFWHAKGWTLW--------QQVEQYLRGTISRHGYQEVRTPQIVDRSLWEKSGHWGMY 312 Query: 90 GKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M ++++D A+ P + IF +KSYR+LP + R+E Sbjct: 313 SDLMFTTQSEKHDYAV--KPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 370 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGG 204 G+MR R F+ DA+ F T E + +++ G + I ++ + P +G Sbjct: 371 GIMRVRNFVQDDAHIF-CTDEQVQEEAAAFIALLQKVYADFGFRDIQIKLSTRPEKRVGA 429 Query: 205 D 205 D Sbjct: 430 D 430 >gi|22125796|ref|NP_669219.1| threonyl-tRNA synthetase [Yersinia pestis KIM 10] gi|45442011|ref|NP_993550.1| threonyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|51596666|ref|YP_070857.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|108807773|ref|YP_651689.1| threonyl-tRNA synthetase [Yersinia pestis Antiqua] gi|108812050|ref|YP_647817.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516] gi|145598020|ref|YP_001162096.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149365658|ref|ZP_01887693.1| threonyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|153950233|ref|YP_001400689.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|162420291|ref|YP_001607032.1| threonyl-tRNA synthetase [Yersinia pestis Angola] gi|165927513|ref|ZP_02223345.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939479|ref|ZP_02228025.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|166011794|ref|ZP_02232692.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166210452|ref|ZP_02236487.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167400748|ref|ZP_02306254.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167424849|ref|ZP_02316602.1| threonyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024059|ref|YP_001720564.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] gi|186895722|ref|YP_001872834.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|218929522|ref|YP_002347397.1| threonyl-tRNA synthetase [Yersinia pestis CO92] gi|229837960|ref|ZP_04458119.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895121|ref|ZP_04510297.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|229898521|ref|ZP_04513666.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229902362|ref|ZP_04517482.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516] gi|270490458|ref|ZP_06207532.1| threonine--tRNA ligase [Yersinia pestis KIM D27] gi|294503566|ref|YP_003567628.1| threonyl-tRNA synthetase [Yersinia pestis Z176003] gi|22654122|sp|Q8ZDW5|SYT_YERPE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73919846|sp|Q669Z0|SYT_YERPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122979581|sp|Q1C728|SYT_YERPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122980145|sp|Q1CIG3|SYT_YERPN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225518|sp|A4TIL1|SYT_YERPP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166987327|sp|A7FHG1|SYT_YERP3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238687259|sp|A9R0A8|SYT_YERPG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238688418|sp|B1JJ17|SYT_YERPY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238691408|sp|B2K668|SYT_YERPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21958722|gb|AAM85470.1|AE013793_6 threonine tRNA synthetase [Yersinia pestis KIM 10] gi|45436874|gb|AAS62427.1| threonyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|51589948|emb|CAH21580.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|108775698|gb|ABG18217.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Yersinia pestis Nepal516] gi|108779686|gb|ABG13744.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Yersinia pestis Antiqua] gi|115348133|emb|CAL21061.1| threonyl-tRNA synthetase [Yersinia pestis CO92] gi|145209716|gb|ABP39123.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149292071|gb|EDM42145.1| threonyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|152961728|gb|ABS49189.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|162353106|gb|ABX87054.1| threonyl-tRNA synthetase [Yersinia pestis Angola] gi|165912528|gb|EDR31159.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|165920568|gb|EDR37845.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989259|gb|EDR41560.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166207632|gb|EDR52112.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167049601|gb|EDR61009.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056036|gb|EDR65814.1| threonyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750593|gb|ACA68111.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] gi|186698748|gb|ACC89377.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|229680697|gb|EEO76793.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516] gi|229688069|gb|EEO80140.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229694326|gb|EEO84373.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701883|gb|EEO89906.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|262361608|gb|ACY58329.1| threonyl-tRNA synthetase [Yersinia pestis D106004] gi|262365651|gb|ACY62208.1| threonyl-tRNA synthetase [Yersinia pestis D182038] gi|270338962|gb|EFA49739.1| threonine--tRNA ligase [Yersinia pestis KIM D27] gi|294354025|gb|ADE64366.1| threonyl-tRNA synthetase [Yersinia pestis Z176003] gi|320015090|gb|ADV98661.1| threonyl-tRNA synthetase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 642 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 79/394 (20%), Positives = 140/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + N ++ G + I ++ + P S E Sbjct: 375 RVRGFTQDDAHVF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDEL 433 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ P E + I L D Sbjct: 434 WTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFT--------------------LHDC 473 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 L R + G + +SLP +SA++ G + M I G+M Sbjct: 474 LD-------RAWQCGTV---QLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G +P +AP ++ ++NI D +++ +L G D E+ Sbjct: 524 ILTEEYAG---FFPTWLAPVQVVVMNITDSQS---DYVQQVTKKLQDAGIRAKADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++ G K V K+ ++ R Sbjct: 578 IGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTR 611 >gi|170695920|ref|ZP_02887060.1| threonyl-tRNA synthetase [Burkholderia graminis C4D1M] gi|170139218|gb|EDT07406.1| threonyl-tRNA synthetase [Burkholderia graminis C4D1M] Length = 635 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 15/164 (9%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + + H S G+ W P G V +R N Sbjct: 231 YLHMLEE----AEKRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVND 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAM--IYGPTHEEVMTDIFRS 120 G +E+ P + LW SG + +Y + M +++ D A+ + P H +V F Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHVQV----FNH 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 ++SYR+LP + + R+E G+MR R F+ DA+ F Sbjct: 343 GLRSYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIF 386 >gi|329904275|ref|ZP_08273747.1| Threonyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gi|327548052|gb|EGF32784.1| Threonyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 635 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 11/174 (6%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W P G V +R G E+ P + LW +SG +++Y KE Sbjct: 256 QEEAPGMIFWHPKGWSVWQQVEQYMRRVYQDNGYQEVKAPQILDISLWEKSGHWENY-KE 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + + ++ P + IFRS ++SYR+LP + + R+E G+MR Sbjct: 315 NMFTTESEKRSYALKPMNCPGHVQIFRSDMRSYRDLPLRYGEFGQCHRNEPSGSLHGIMR 374 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL----GLKSIPMRAESGP 201 R F D + F ++ + V+Y + H++ G +I + + P Sbjct: 375 VRGFTQDDGHIF-----CTEDQILEECVAYTALLHKVYADFGFANITYKVATRP 423 >gi|291398043|ref|XP_002715638.1| PREDICTED: threonyl-tRNA synthetase 2, mitochondrial [Oryctolagus cuniculus] Length = 718 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 95/419 (22%), Positives = 156/419 (37%), Gaps = 73/419 (17%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + + A IR E G E+ PTL S LW +SG ++ Y Sbjct: 313 FFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTLFSTKLWEKSGHWEHYK 372 Query: 91 KEMLRL--ADRNDKA--------------MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 ++M L +D + A + P + +F +S+R LP Sbjct: 373 EDMFALQPSDSDSSACSQSDHPTSQPPDTLALKPMNCPAHCLMFAHRPRSWRELPLRLAD 432 Query: 135 IQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKS 192 R E G+ R R F DA+ F + Y + +LR ++ LG S Sbjct: 433 FGALHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEAEIYGCL--DFLRSVYAVLGF-S 489 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 + + P G F+ P + + SL + E W Sbjct: 490 FHLALSTRPSG-----------------------FLGEPCLWDQAEQLLQQSLEAFGEPW 526 Query: 253 ------TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SATFKG 304 A Y DVH L D+L R + G I + LP+ +KG Sbjct: 527 DLSPGDGAFYGPKIDVH---LRDAL-------GRPHQCGTI---QLDFQLPLRFDLQYKG 573 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G + V + +G++ + V+ S GK WP ++PF++++I + + + Sbjct: 574 QAGNLERPVLIHRAVLGSVERLLGVLAESCGGK---WPLWLSPFQVAVIPVGTEQE---E 627 Query: 364 ACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ L G D D G + + A L + Q +VG K S+ V ++ R Sbjct: 628 YAREVQQTLQAAGLASDLDADPGLTLSRRVRRAQLAHYNFQFVVGRKEQSNRTVNVRTR 686 >gi|298206753|ref|YP_003714932.1| threonyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] gi|83849384|gb|EAP87252.1| threonyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] Length = 648 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 83/405 (20%), Positives = 158/405 (39%), Gaps = 43/405 (10%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 +G+ WLP G + + +++ Q + G + P + +L+V SG Y YG++ + Sbjct: 261 QGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTPHIGQKELYVTSGHYAKYGEDSFQP 320 Query: 96 -LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + + P + +I+ + SYR+LP + + +R E G+ R R Sbjct: 321 ISTPAEGEEFLLKPMNCPHHCEIYNNSPWSYRDLPKRYAEFGTVYRYEQSGELHGLSRVR 380 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TP+ + K+ + +F LG ++ + + L Sbjct: 381 GFTQDDAHIF-CTPDQLDEEFKKVIDLTMYVFSSLGFENFTTQ--------------VSL 425 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDI--ISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D + K+ + +EN + LN IVE A + D + Sbjct: 426 RDPENPDKYIGKE--ENWEKAENAILSAVKDKGLNYIVETGEAAFYGPK-------LDFM 476 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAV 328 K R ++G I Y+LP T+KG+D + H V + G+M A+ Sbjct: 477 V--KDALGRSWQLGTI---QVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFVAI 531 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + G +W + P + ++++ + + +K+ L D E + Sbjct: 532 LLEHTAGNFPLW---LMPEQAIILSL---SEKYENYSKKVLNLLENHEIRALTDHRSETM 585 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G + A++ P +IVG + +D V ++ M++EE Sbjct: 586 GKKIREAEVNKIPYMLIVGEQEENDGTVSVRKHGGEDLGTMTVEE 630 >gi|307131177|ref|YP_003883193.1| threonyl-tRNA synthetase [Dickeya dadantii 3937] gi|306528706|gb|ADM98636.1| threonyl-tRNA synthetase [Dickeya dadantii 3937] Length = 642 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 88/415 (21%), Positives = 150/415 (36%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 + D E + + P P E + I Sbjct: 432 ----DMWDRAEEDLAAALTENGIPFDYQPGEGAFYGPKIEFT------------------ 469 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 L D L R + G + +SLP +SA++ G + + M I G+ Sbjct: 470 --LHDCLD-------RAWQCGTV---QLDFSLPGRLSASYVGENNERQVPVMIHRAILGS 517 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 M ++ G +P +AP + ++NI D ++ +L G V Sbjct: 518 MERFIGILTEEFAG---FFPTWLAPVQAVVMNIT---DTQSDYVSELTRKLQDAGIRVKA 571 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P ++ G K V KV ++ R + + EVI Sbjct: 572 DLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVIT 626 >gi|212223716|ref|YP_002306952.1| prolyl-tRNA synthetase [Thermococcus onnurineus NA1] gi|212008673|gb|ACJ16055.1| prolyl-tRNA synthetase [Thermococcus onnurineus NA1] Length = 482 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 75/160 (46%), Gaps = 3/160 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + + ++ ++ +G YV ++G+ + R++AAVI D +G+ Sbjct: 221 GRTLQIGTMHNYRQNFAKAYEILYETENGDHEYVHQTTFGM-SERLLAAVIAIHGDDRGM 279 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P ++AP ++ ++ I D +I L G V D+ + G +F + Sbjct: 280 VLPPTIAPIQVVIVPIPKKDAGADVFTYAREIAEELRTAGLRVHVDERDIRPGRKFYDWE 339 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L G PL++ VG + V K + R T +E + + ++ Sbjct: 340 LKGVPLRIEVGPRDVEGRKAVLARRDTLTKETVERDRIVE 379 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 5/124 (4%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+ WLP G K + N+ I E RTG E+ P L + E+ + E+ Sbjct: 33 KGMNIWLPYGLKIMRNIERFIHAEMERTGHDEVLFPALIPETEFQKEAEHIAGFEGEVFW 92 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D D +I PT E M +F I+S+ +LPF YQI +R E + ++R Sbjct: 93 VTHAGHDPLDIKLILRPTSETAMYSMFALWIRSHADLPFKVYQIVNTYRYETKHTRPLIR 152 Query: 152 SREF 155 RE Sbjct: 153 VREI 156 >gi|91784428|ref|YP_559634.1| threonyl-tRNA synthetase [Burkholderia xenovorans LB400] gi|123358618|sp|Q13WF7|SYT_BURXL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91688382|gb|ABE31582.1| Ser-tRNA(Thr) hydrolase [Burkholderia xenovorans LB400] Length = 635 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 15/164 (9%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + + H S G+ W P G V +R N Sbjct: 231 YLHMLEE----AEKRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVND 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAM--IYGPTHEEVMTDIFRS 120 G +E+ P + LW SG + +Y + M +++ D A+ + P H +V F Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHVQV----FNH 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 ++SYR+LP + + R+E G+MR R F+ DA+ F Sbjct: 343 GLRSYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIF 386 >gi|54298706|ref|YP_125075.1| threonyl-tRNA synthetase [Legionella pneumophila str. Paris] gi|73919801|sp|Q5X1H3|SYT_LEGPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|53752491|emb|CAH13923.1| Threonyl tRNA synthetase [Legionella pneumophila str. Paris] Length = 637 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 84/396 (21%), Positives = 146/396 (36%), Gaps = 54/396 (13%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G + +R G E+ P L LW +SG + ++ EM Sbjct: 259 APGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKSGHWANFRDEMF- 317 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + ++ P I+ +KSYR+LP + R E G+MR R Sbjct: 318 VTETENRHYAVKPMSCPCHVQIYNHGLKSYRDLPLRLSEFGNCHRCEPSGALHGLMRVRN 377 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFI 211 + DA+ F T + + M ++ G I R P +G D Sbjct: 378 MVQDDAHIF-CTEDQIQSEVAMMLELVQSVYKDFGFTEIKYRLALRPEKRVGSD------ 430 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + D ET + + L +E AP + K+ SL Sbjct: 431 DVWDKAETAL-------------------KLAMLGRNIEWVDAP--GEGAFYGPKIECSL 469 Query: 272 PENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVV 325 + +G I+ GT +S+P + A++ DG K V + +G+ Sbjct: 470 SDC---------LGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + GK +W ++P + ++ I + EK+ L K G +D Sbjct: 521 MGILIEHYAGKLPLW---LSPVQAVVLTISEKQN---EYAEKVRKTLQKRGIRANFDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG K V + +V ++ R Sbjct: 575 EKIGFKIREHTLQKIPYLLVVGDKEVENCQVAVRTR 610 >gi|262067494|ref|ZP_06027106.1| threonine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] gi|291378856|gb|EFE86374.1| threonine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] Length = 637 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 85/433 (19%), Positives = 174/433 (40%), Gaps = 52/433 (12%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + L I ++ G +LP G + + + R+E + G +++ P Sbjct: 236 EAEKRDHRKLGKELELFFISEYGPGFPFFLPKGMVFRNVLIDLWRKEHEKAGYLQLETPI 295 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + + +LW SG + +Y +E + ++ ++ P + F+ + SY++LP Sbjct: 296 MLNKELWEISGHWFNY-RENMYTSEIDELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLA 354 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ R E G+MR R F D++ F +TP+ + + + + +L Sbjct: 355 ELGKVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEIIGVVNLIDKFYSKL---- 409 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 E+ + T + S++ D + D + I Sbjct: 410 -------------FGFEYEIELSTKPEKAIGSQEIWDMAESALAGALDKLGRKYKINPGD 456 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG 307 A Y D K+ D+ +G ++ GT ++LP T+ G DG Sbjct: 457 GAFYGPKLDF---KIKDA-------------IGRMWQCGTIQLDFNLPERFDVTYIGEDG 500 Query: 308 KDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + H V + G++ ++ + G +W +AP ++ ++ + + C + Sbjct: 501 EKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMW---LAPVQVKVLTL---NDECIPYAK 554 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +I +L ++G DD E IG + A+ P+Q+I+G V + +V I+ + Sbjct: 555 EIMDKLQELGIRAELDDRNETIGYKIREANGKYKIPMQLIIGKNEVENKEVNIRRFGSKD 614 Query: 426 REDMSLEEVINYA 438 + SL+E +Y Sbjct: 615 QFPKSLDEFYDYV 627 >gi|24373852|ref|NP_717895.1| threonyl-tRNA synthetase [Shewanella oneidensis MR-1] gi|73919825|sp|Q8EER9|SYT_SHEON RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|24348259|gb|AAN55339.1|AE015671_6 threonyl-tRNA synthetase [Shewanella oneidensis MR-1] Length = 642 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 81/397 (20%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR + N+ E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + + G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQVQAEVSSCIQMVYDTYSTFGFENIVVKLSTRPEKRIGDDAM 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ Q + + +P E + I L Sbjct: 434 WD---RAEEALKQALRANNIEFTILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G+ +P +AP ++ ++NI D E++ + G +D Sbjct: 521 FLGILIEEYAGR---FPTWLAPMQVVVMNITDKQA---DYVEEVVKFFKEQGIRASFDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|114563199|ref|YP_750712.1| threonyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] gi|122299726|sp|Q082E1|SYT_SHEFN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114334492|gb|ABI71874.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] Length = 642 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 82/397 (20%), Positives = 145/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR++ + E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWSIFLELEKFIRQKLGQYTYQEVKGPLMMDRVLWERSGHWDKYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTNSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + + G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHVF-CTDDQVQEEVSACIQMVYDTYATFGFDNIVVKLSTRPEKRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ Q + + +P E + I L Sbjct: 432 -DMWDRAEDALKQALANNNIKYEILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPTRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + GK +P +AP ++ ++NI D E+I + G +D Sbjct: 521 FIGILIEEYAGK---FPTWLAPMQVVVMNITDKQA---DYVEEIVKFFKEQGIRASFDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|261821451|ref|YP_003259557.1| threonyl-tRNA synthetase [Pectobacterium wasabiae WPP163] gi|261605464|gb|ACX87950.1| threonyl-tRNA synthetase [Pectobacterium wasabiae WPP163] Length = 642 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 83/409 (20%), Positives = 148/409 (36%), Gaps = 42/409 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + +W ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGPFMMDRVMWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + N ++ G + I ++ + P S E Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 433 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ + P E + I L D Sbjct: 434 WDRAEADLAAALTENNIEFAYQPGEGAFYGPKIEFT--------------------LHDC 473 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 L R + G + +SLP ++A++ G + M I G+M Sbjct: 474 LD-------RAWQCGTV---QLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ G +P +AP ++ ++NI D ++ +L + G V D E+ Sbjct: 524 ILTEEFAG---FFPTWLAPVQVVIMNITDSQA---DYVNELTQKLQEAGIRVKADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 IG + L P ++ G K V KV ++ R + + EVI+ Sbjct: 578 IGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVIS 626 >gi|309389087|gb|ADO76967.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Halanaerobium praevalens DSM 2228] Length = 643 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 91/429 (21%), Positives = 166/429 (38%), Gaps = 53/429 (12%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 KY + + RD +L L + + +G + P G + + +EE + Sbjct: 230 EKYLNRVEEAKKRDHRKLGKELDLFS--MQDEGRGFPFFHPKGMALRNALVDFWKEEHYQ 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW +SG +D Y M +++A P + +++ + Sbjct: 288 AGYEEIQTPIILDESLWHQSGHWDHYQDNMY-FTKIDEEAHAVKPMNCPGGILVYKDSMH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ L R E+ G+MR R F DA+ + L P + + + Sbjct: 347 SYRELPIRMAELGLVHRHEMSGALHGLMRVRSFTQDDAHIYCL-PSQIETELSGVIKLVD 405 Query: 183 RIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +I+ G ++ + + GD + + T Q K+ +D+ + + + F Sbjct: 406 KIYSAFGFNYNVELSTKPEKAMGD---DALWNKATDALQNAIEKNNLDYEVNAGDGAF-- 460 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPM 298 Y D H L DSL R + G I F ++ L Sbjct: 461 --------------YGPKIDFH---LEDSL-------GRTWQCGTIQLDFQMPERFDL-- 494 Query: 299 SATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + G DG++H + YG R + +IE +P +AP ++ +I + Sbjct: 495 --NYIGQDGEEHRPVMIHRAIYG-SIERFIGILIEHFAGA----FPTWMAPVQVEIIPV- 546 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + DQ+ D ++ L + V D E++G + A + P +IVGS+ + Sbjct: 547 SDDQI--DYAMQVKEELKQEKIRVEVDSRSEKVGYKIRDAQVKQVPYMLIVGSREEDNGT 604 Query: 416 VEIKHRLTG 424 V ++ R G Sbjct: 605 VSVRDRREG 613 >gi|71021529|ref|XP_760995.1| hypothetical protein UM04848.1 [Ustilago maydis 521] gi|46100879|gb|EAK86112.1| hypothetical protein UM04848.1 [Ustilago maydis 521] Length = 759 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 4/140 (2%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M H+ S G WLP G + + + ++ E + G E+ P + ++ LW SG + +Y Sbjct: 363 MFHELSPGSCFWLPHGARIYNTLQEFLKSEYRQRGFDEVVTPNMYNSKLWQTSGHWQNYK 422 Query: 91 KEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 +M L D+ A+ P + +F S +SY+ LP + R+E G Sbjct: 423 DDMFVLGVDKEQFAL--KPMNCPGHCLMFASRDRSYKELPLRLADFGVIHRNEASGALSG 480 Query: 149 VMRSREFLMKDAYSFDLTPE 168 + R R F DA+ F ++ + Sbjct: 481 LTRVRRFCQDDAHIFCMSSQ 500 >gi|148358548|ref|YP_001249755.1| threonyl tRNA synthase [Legionella pneumophila str. Corby] gi|296108363|ref|YP_003620064.1| threonyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] gi|166223351|sp|A5IAK9|SYT_LEGPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148280321|gb|ABQ54409.1| threonyl tRNA synthase [Legionella pneumophila str. Corby] gi|295650265|gb|ADG26112.1| threonyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] Length = 637 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 84/396 (21%), Positives = 147/396 (37%), Gaps = 54/396 (13%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G + +R G E+ P L LW +SG + ++ EM Sbjct: 259 APGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKSGHWANFRDEMF- 317 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + ++ P I+ +KSYR+LP + R E G+MR R Sbjct: 318 VTETENRHYAVKPMSCPCHVQIYNHGLKSYRDLPLRLSEFGNCHRCEPSGALHGLMRVRN 377 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFI 211 + DA+ F T + + M ++ G I R P +G D Sbjct: 378 MVQDDAHIF-CTEDQIQSEVAMMLELVQSVYKDFGFTEIKYRLALRPEKRVGSD------ 430 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + D ET + + N ++ D AP + K+ SL Sbjct: 431 DVWDKAETA-------LKLAMQGRNIEWVD------------AP--GEGAFYGPKIECSL 469 Query: 272 PENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVV 325 + +G I+ GT +S+P + A++ DG K V + +G+ Sbjct: 470 SDC---------LGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + GK +W ++P + ++ I + EK+ L K G +D Sbjct: 521 MGILIEHYAGKLPLW---LSPVQAVVLTISEKQN---EYAEKVRKTLQKRGIRANFDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG K V + +V ++ R Sbjct: 575 EKIGFKIREHTLQKIPYLLVVGDKEVENCQVAVRTR 610 >gi|66362768|ref|XP_628350.1| threonyl-tRNA synthetase (RNA binding domain TGS+HxxxH+tRNA synthetase) [Cryptosporidium parvum Iowa II] gi|46229397|gb|EAK90215.1| threonyl-tRNA synthetase (RNA binding domain TGS+HxxxH+tRNA synthetase) [Cryptosporidium parvum Iowa II] Length = 763 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 65/156 (41%), Gaps = 3/156 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G + + + IR E E+ P + S DLW SG Y +Y KE + Sbjct: 352 SPGSCFWLPAGARLYNKLMDFIRNEYRIREFTEVITPNIFSCDLWKTSGHYFAY-KENMF 410 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + D +K P + +F+ SYR LP + R+E G+ R R Sbjct: 411 IFDVEEKEWGLKPMNCPGHCVMFKHMNPSYRQLPIRLADFGVLHRNEFSGALNGLTRVRR 470 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F DA+ F TPE + K I+ +LG Sbjct: 471 FQQDDAHIF-CTPEQIQEEVFKALDFLFFIYGQLGF 505 >gi|227498537|ref|ZP_03928681.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226903993|gb|EEH89911.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 636 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 160/415 (38%), Gaps = 55/415 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ + G +LP G + + RE + E+S P + + LW SG +D Y Sbjct: 256 MLSDYGPGFPFFLPNGMILRNELINYWREVHRKYNYYEVSTPMIMNRQLWETSGHWDHYK 315 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M D D A+ P + ++ S SYR+LP ++ L R EL G Sbjct: 316 ENMYFTKIDGEDYAI--KPMNCPGGMLVYDSEPHSYRDLPLRVGELGLVHRHELSGALHG 373 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGD 205 + R R F DA+ F + P + + + ++ GL + R ++ +G D Sbjct: 374 LFRVRCFTQDDAHIF-MMPNQIEDVIQETIRLFDEVYATFGLTYHAELSTRPDNS-MGDD 431 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT-APYAATSDVHN 264 + E A K DF L +V + A Y D H Sbjct: 432 ATWEMTTNA--------LRKAMDDF-------------GLKYVVNEGDGAFYGPKIDFH- 469 Query: 265 EKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIG 320 L DS+ R + G I K++L T+ G DG+ H V + G Sbjct: 470 --LKDSI-------GRTWQCGTIQLDMLLPEKFNL----TYTGEDGQKHRPVMIHRVVYG 516 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ ++ G W +AP ++ ++ I + + + ++ +G Sbjct: 517 SIERFIGILIENYAGAFPAW---LAPEQVRVMPIT---DKFNEYAKSVVDKMEALGIRAH 570 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E+IG + + P ++VG K ++ V ++ R G M+++E I Sbjct: 571 LDDRNEKIGYKIREGQVKKVPYMLVVGEKEATNGTVSVRSRSEGEMGAMAVDEFI 625 >gi|228933677|ref|ZP_04096525.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826004|gb|EEM71789.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 639 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 3/166 (1%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 G++R R F DA+ F +TPE + + ++ G K Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPEQIEDEIKSVMAQIDYVYKTFGFK 417 >gi|49479942|ref|YP_036488.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|218903521|ref|YP_002451355.1| threonyl-tRNA synthetase [Bacillus cereus AH820] gi|228927442|ref|ZP_04090498.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121934|ref|ZP_04251153.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201] gi|49331498|gb|AAT62144.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|218538936|gb|ACK91334.1| threonyl-tRNA synthetase [Bacillus cereus AH820] gi|228661583|gb|EEL17204.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228832235|gb|EEM77816.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 639 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 3/166 (1%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 G++R R F DA+ F +TPE + + ++ G K Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPEQIEDEIKSVMAQIDYVYKTFGFK 417 >gi|319426373|gb|ADV54447.1| threonyl-tRNA synthetase [Shewanella putrefaciens 200] Length = 642 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 81/397 (20%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR + N+ E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + + G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQVQEEVSACIQMVYDTYSTFGFENIVVKLSTRPEKRIGDDAM 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ Q + + +P E + I L Sbjct: 434 WD---RAEEALKQALRANNIEFTLLPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPNRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G+ +P +AP ++ ++NI D ++I + G +D Sbjct: 521 FLGILIEEYAGR---FPTWLAPMQVVVMNITDKQA---DYVQEIVKFFKEQGIRASFDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|323493467|ref|ZP_08098589.1| threonyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] gi|323312290|gb|EGA65432.1| threonyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] Length = 642 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 89/426 (20%), Positives = 159/426 (37%), Gaps = 56/426 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ +RE+ G E+ P + LW SG +D Y + Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFVREKLTEYGYQEVKGPLIMDRVLWERSGHWDKYAE 316 Query: 92 EMLRLADRN-DKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M + N D A+ + P H IF +KSYR+LP + R+E Sbjct: 317 AMFTTSSENRDYALKPMNCPGH----VQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH 372 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGG 204 G+MR R F DA+ F T + + G +I ++ + P +G Sbjct: 373 GIMRVRGFTQDDAHIF-CTESQIQDEVTSCIKMVYDTYQTFGFDNIVVKLSTRPEKRVGS 431 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 D + D E + S + MD P I E A Y + Sbjct: 432 D------EIWDQSEEALKQSLEAMDIPY--------------EIQEGEGAFYGPKIEF-- 469 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 L D L R + G + ++LP + AT+ + + M I G+ Sbjct: 470 -TLHDCLD-------RAWQCGTV---QLDFNLPGRLGATYVDENNERQVPVMIHRAILGS 518 Query: 322 M-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + R + +IE + +P ++P + ++NI D +++ +L K G Sbjct: 519 LERFIGILIEEYYG----FFPTWLSPEQAVIMNITDKQS---DYVQEVAQKLQKCGIRAK 571 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 D E+IG + L P ++ G + + ++ ++ R +++ I+Y Sbjct: 572 ADLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQD 631 Query: 441 RFSNNR 446 S+ + Sbjct: 632 EISSRK 637 >gi|223938078|ref|ZP_03629976.1| threonyl-tRNA synthetase [bacterium Ellin514] gi|223893292|gb|EEF59755.1| threonyl-tRNA synthetase [bacterium Ellin514] Length = 618 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 19/173 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML--- 94 G+ WLP G ++ + + +E + G + + P L ++ SG Y + M Sbjct: 226 GLPLWLPKGTMIVEELENLAKETEFAAGYVRVKTPHLAKEKMYKTSGHLPYYAESMFPPM 285 Query: 95 ----RLADRNDKAMIY------GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 + D N++A Y P H IF + SYR+LP + +R E Sbjct: 286 ELKEKGGDSNEEAERYYLKAMNCPHHHR----IFAAEPHSYRDLPLRLAEYGTCYRYEQS 341 Query: 145 PR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 FG+MR R M DA+ + T E +N + YL+ F GL+ MR Sbjct: 342 GELFGLMRVRSLNMNDAHIY-CTEEQFADEFNAVNEMYLKYFKIFGLEKYQMR 393 >gi|157691545|ref|YP_001486007.1| threonyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|157680303|gb|ABV61447.1| threonine--tRNA ligase [Bacillus pumilus SAFR-032] Length = 643 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 82/418 (19%), Positives = 171/418 (40%), Gaps = 43/418 (10%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP Q + + A RE +++ E+S P + + +LW +SG +D Y Sbjct: 259 MFSEEAPGMPFYLPKSQIVRNELMAFSREVRSKAQYEEVSTPFMMNQELWEKSGHWDHYH 318 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M ++ + + P + +F++ + SYR+LP + R E G+ Sbjct: 319 ENMY-FSEVDHTSFALKPMNCPGHMLMFKNSLFSYRDLPIRMAEFGQVHRHEFSGALNGL 377 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 R R F DA+ F L + + ++F ++ G + + R E +G D Sbjct: 378 FRVRTFCQDDAHIF-LREDQIEAEIKRIFQLVDHVYRTFGFEYSVELSTRPEKA-LGDD- 434 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + D E+ + K+ +D D+ LN E A Y D H Sbjct: 435 -----AIWDISESAL---KNVLD----RLKVDY----QLN---EGDGAFYGPKIDFH--- 472 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 + D+L + + + ++ F K+ L + K V + S G++ Sbjct: 473 IKDALQRSHQCATIQLD----FQMPEKFDL---TYINEKNEKVRPVVIHSAIFGSLDRFL 525 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ G +W +AP ++ +I + ++ D C ++ +L K+G V D+ E Sbjct: 526 GILIEHFAGAFPLW---LAPVQVQIIPV---SKIHLDHCLEVQQQLRKIGIRVTIDERDE 579 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 ++G + A + P ++G + + + I+ +S+++ + A+ + + Sbjct: 580 KLGYKMREAQMQKIPYIAVIGDTEMQEKTLNIRQHGEKTSNQLSIDDFQHMAAQQIKD 637 >gi|150403636|ref|YP_001330930.1| prolyl-tRNA synthetase [Methanococcus maripaludis C7] gi|171472898|sp|A6VK03|SYP_METM7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150034666|gb|ABR66779.1| prolyl-tRNA synthetase [Methanococcus maripaludis C7] Length = 460 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 4/148 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++G + G ++ F+ DG+ +V YGI R +A++I D KG+ Sbjct: 212 GKTMQIGTVHNLGQNFAKTFELEFETPDGEKDFVYQTCYGISD-RAIASLISVHGDEKGL 270 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P VAP +I LI + K +++ + +++ + L K V DD + G ++ + Sbjct: 271 VIPVDVAPIQIVLIPLLFKGKEEIVMEKIKELNSTL-KSEFRVHLDDRDIRPGRKYNDWE 329 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + G PL++ +G + + + + I R TG Sbjct: 330 IKGVPLRIELGPRDIENGQALIVRRDTG 357 Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 83/221 (37%), Gaps = 18/221 (8%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG +LP G K I+R+ + TG E P L +L + G + ++ + Sbjct: 24 KGCGVYLPYGFKIRRYSFEILRKLLDETGHDETLFPMLIPENLLAKEGEHIKGFEDEVFW 83 Query: 97 ADRNDKA-----MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 K + PT E M + + IK + +LP YQ+ FR E + ++R Sbjct: 84 VTHGGKTPLEVKLALRPTSETTMYYMMKQWIKVHTDLPLKLYQVVNTFRYETKHTRPLIR 143 Query: 152 SREFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS-IPMRAESGPI-GGDLSH 208 RE + K+A++ T E + Y F + + I R E G D + Sbjct: 144 LREIMSFKEAHTAHATKEDCDAQIKEALNLYGEFFDEICVPYIISKRPEWDKFPGADYTM 203 Query: 209 EFIVLADTGET----------QVFCSKDFMDFPIPSENTDF 239 F + G+T Q F ++F P DF Sbjct: 204 AFDTIYPDGKTMQIGTVHNLGQNFAKTFELEFETPDGEKDF 244 >gi|67605980|ref|XP_666722.1| threonyl-tRNA synthetase [Cryptosporidium hominis TU502] gi|54657772|gb|EAL36495.1| threonyl-tRNA synthetase [Cryptosporidium hominis] Length = 763 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 65/156 (41%), Gaps = 3/156 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G + + + IR E E+ P + S DLW SG Y +Y KE + Sbjct: 352 SPGSCFWLPAGARLYNKLMDFIRSEYRIREFTEVITPNIFSCDLWKTSGHYFAY-KENMF 410 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + D +K P + +F+ SYR LP + R+E G+ R R Sbjct: 411 IFDVEEKEWGLKPMNCPGHCVMFKHMNPSYRQLPIRLADFGVLHRNEFSGALNGLTRVRR 470 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F DA+ F TPE + K I+ +LG Sbjct: 471 FQQDDAHIF-CTPEQIQEEVFKALDFLFFIYGQLGF 505 >gi|319649026|ref|ZP_08003235.1| ThrZ protein [Bacillus sp. BT1B_CT2] gi|317389020|gb|EFV69838.1| ThrZ protein [Bacillus sp. BT1B_CT2] Length = 639 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 77/403 (19%), Positives = 159/403 (39%), Gaps = 37/403 (9%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP GQ + + RE QN E+ P + + LW +SG +D Y Sbjct: 258 MFSEEAPGMPFYLPKGQIVRKELEKLSRELQNNASYDEVHTPFMMNYRLWEKSGHWDHY- 316 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +E + ++ ++ P + IF++++ SYR+LP + R E G+ Sbjct: 317 QENMYFSEVDNTKFAIKPMNCPGHMLIFKNNLYSYRDLPIRLAEYGQVHRHEFSGSLNGL 376 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R R F DA+ F + + + K+F +++ +G E Sbjct: 377 LRVRTFCQDDAHIF-VREDQIESEIKKVFHLIDQVYRTIGF------------------E 417 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + V T + + S DD+ + E A Y D H + D Sbjct: 418 YSVELSTRPDDSLGNNHLWEVSEGSLKNVLDDLAIKYQVNEGDGAFYGPKIDFH---IKD 474 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 +L + + ++ F K+ L + K V + G++ ++ Sbjct: 475 ALKRSHQCGTIQLD----FQMPEKFDL---TYINHNNEKVRPVVIHRAIFGSIDRFFGIL 527 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 G +W +AP ++ +I I + + C I + L ++G V ++ +++G Sbjct: 528 IEHFAGAFPVW---LAPIQVQIIPI---SHIHLEYCLGIKSELKQLGIRVQINESNQKLG 581 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + A + P ++VG + ++ V ++ ++++S+E Sbjct: 582 YKIREAQVQKIPYTLVVGDNEIKENGVNVRKYGEEQQKNVSIE 624 >gi|196040031|ref|ZP_03107334.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99] gi|196029290|gb|EDX67894.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99] Length = 639 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 3/166 (1%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 G++R R F DA+ F +TPE + + ++ G K Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPEQIEDEIKSVMAQIDYVYKTFGFK 417 >gi|222823074|ref|YP_002574647.1| threonyl-tRNA synthetase [Campylobacter lari RM2100] gi|254783514|sp|B9KEB1|SYT_CAMLR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|222538295|gb|ACM63396.1| threonyl-tRNA synthetase [Campylobacter lari RM2100] Length = 603 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 88/418 (21%), Positives = 160/418 (38%), Gaps = 53/418 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WL G K + ++ + G + P L AD W SG Y +Y KE + Sbjct: 229 GLPIWLSNGAKLRSKLEHLLYKAHRLRGYEPVRGPELLKADAWKISGHYANY-KENMYFT 287 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + I++S ++SYR+LP F++ + R E G+ R REF Sbjct: 288 QIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFT 347 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F + P K ++ L M+A G D E T Sbjct: 348 QDDAHIFCM-PSQIKE----------QVLEILSFVDTLMKA----FGFDYEMEI----ST 388 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + + D + D+ I E A Y D+ K+ D+L Sbjct: 389 RPAKAIGDDEIWDIATNALKQALDEQGLKYGIDEGGGAFYGPKIDI---KITDAL----- 440 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKD--------HYVQMGSYGIGAMRVVAAV 328 R + G I ++LP + D + H +GS+ R + + Sbjct: 441 --KRKWQCGTI---QVDFNLPSRFKLEYTDADNEKKQPVMLHRAILGSFE----RFIGIL 491 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 IE P +AP +++++ I Q + ++I +L ++G D E + Sbjct: 492 IEHCAGE----LPFFIAPTQVAIVPI---SQNHHEYAKEIAKKLLELGIDSEVYSKNESL 544 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + A+ P+ +++G + V++ V ++ R ++ ++L+E I + S R Sbjct: 545 NKKIRTAEKAHVPMILVLGDEEVANKSVALRDRRAKEQKTLTLDEFITLTKEKLSEVR 602 >gi|253688275|ref|YP_003017465.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259516611|sp|C6DFY6|SYT_PECCP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|251754853|gb|ACT12929.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 642 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 86/412 (20%), Positives = 155/412 (37%), Gaps = 48/412 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + +W ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGPFMMDRVMWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + N +FD + Y + L Sbjct: 432 ----EMWDRAEADLAAA-------LTENNIEFDYQPGEGAF-------YGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + +SLP ++A++ G + M I G+M Sbjct: 471 HDCLD-------RAWQCGTV---QLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI D ++ +L + G V D Sbjct: 521 FIGILTEEFAG---FFPTWLAPVQVVIMNIT---DTQSDYVNELTRKLQEAGIRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+IG + L P ++ G K V KV ++ R + + EVI+ Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVIS 626 >gi|19386908|gb|AAL87030.1|AF332624_1 threonyl-tRNA-synthetase [Azotobacter vinelandii] Length = 461 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 8/190 (4%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL R + H + + G+ W P G + +R Q G +E+ P Sbjct: 58 EAEKRDHRKLGKRLDLFHTQEEAPGMVFWHPNGWTVYQVLEQYMRAVQRENGYLEIKTPQ 117 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +Y + M + + P + ++ +KSYR LP Sbjct: 118 VVDRVLWEKSGHWANYAENMF-TTESESRDYAIKPMNCPCHVQVYNQGLKSYRELPLRLA 176 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLK 191 + R+E G+MR R F DA+ F E + + F+ R ++ G + Sbjct: 177 EFGACHRNEPSGALHGIMRVRGFTQDDAHIF--CTEEQMQAESAAFIKLTRQVYADFGFQ 234 Query: 192 SIPMRAESGP 201 I ++ + P Sbjct: 235 DIQLKLSTRP 244 >gi|47458979|ref|YP_015841.1| prolyl-tRNA synthetase [Mycoplasma mobile 163K] gi|81828486|sp|Q6KIE6|SYP_MYCMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|47458307|gb|AAT27630.1| prolyl-tRNA synthetase [Mycoplasma mobile 163K] Length = 476 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 82/158 (51%), Gaps = 5/158 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y G ++ +FK D +V S+GI + R++ A+I D +GI Sbjct: 223 GRALQSGTSHYLGQNFAKAFDISFKDKDNSKSFVYQTSWGI-STRLIGAIIMVHGDNRGI 281 Query: 339 IWPDSVAPFKISLINIKAHD--QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 I P +A ++ +I + A+ +V + A + ++ L K V +D + +G + A ++ Sbjct: 282 IMPPKIATNQVDIITVFANKNPEVLQKAND-LFKTL-KNDFRVRINDSNKSVGFKAAQSE 339 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 + G P+++ +G + + +KV + R T + D+ ++E+ Sbjct: 340 IEGTPIRIEIGPEDLKQNKVILIRRDTQEKIDVKIDEL 377 Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 10/142 (7%) Query: 52 NVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLRLADRNDKAM----IY 106 N N II+E + +PTL L E + E++ + DK + Sbjct: 55 NFNKIIKE----LNVKNLYLPTLIPESLINSEKDHVQGFAPELITVEKVGDKVLNEKLFL 110 Query: 107 GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLT 166 PT E + + F++ + SY +LP Q FR E + +R+ EFL ++ ++ + Sbjct: 111 RPTSEVLFAEYFKTQLNSYNDLPLLLNQWANVFRWE-KTTSPFLRNSEFLWQEGHTSHYS 169 Query: 167 PEGSKHSYNKMFVSYLRIFHRL 188 E + KM Y F Sbjct: 170 EEEAHQFSKKMIQIYANFFEEF 191 >gi|260062022|ref|YP_003195102.1| prolyl-tRNA synthetase [Robiginitalea biformata HTCC2501] gi|88783584|gb|EAR14755.1| prolyl-tRNA synthetase [Robiginitalea biformata HTCC2501] Length = 491 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 79/163 (48%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F +G+ YV S+G+ + R++ A+I + D G+ Sbjct: 233 GKALQAGTSHFLGQNFAKAFDVKFDNTEGQQEYVWATSWGV-STRLMGALIMTHSDDNGL 291 Query: 339 IWPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I + +Q+ + ARL G V +DD + G +F Sbjct: 292 VLPPKLAPIQVVIVPIYRGQEQLEAISAVVNPLAARLRDRGISVKYDDRDTHKPGFKFNE 351 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++ VG + +++ E+ R T ++ + E + Y Sbjct: 352 YELKGVPVRLGVGPRDLANGTFEVARRDTLEKQVVPAEGIEEY 394 Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 99 RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMK 158 R ++ +I PT E ++ D +R I+SYR+LP Q R E+R R +R+ EFL + Sbjct: 113 RLEEELIVRPTSETIIWDTYRRWIQSYRDLPLLINQWANVVRWEMRTRL-FLRTAEFLWQ 171 Query: 159 DAYS 162 + ++ Sbjct: 172 EGHT 175 >gi|238916041|ref|YP_002929558.1| prolyl-tRNA synthetase [Eubacterium eligens ATCC 27750] gi|259511595|sp|C4Z1D7|SYP_EUBE2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|238871401|gb|ACR71111.1| prolyl-tRNA synthetase [Eubacterium eligens ATCC 27750] Length = 479 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ + D K YV S+G R++ AVI + D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFGIQYTDKDNKLKYVHQTSWGT-TTRLIGAVIMTHGDDSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P VAP ++ +I I D ++ L G V DD + G +F+ ++ Sbjct: 284 VLPPKVAPVQVDVIPIMQKKAGVLDKAYEVGQALKAAGLRVKVDDSDKNPGWKFSEQEMR 343 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P++V +G + + ++ I R T + +S++E+ + Sbjct: 344 GIPVRVEMGPRDIEANQAVIVRRDTREKITVSIDELAD 381 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 10/137 (7%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSY 89 M + KG + P G +N+ + TG + +P + + L VE + + Sbjct: 32 MSYSSVKGCMIFKPAGYAIWENIKNEMDRRFKETGVENVYLPMFIPESLLEVEKDHVEGF 91 Query: 90 GKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDEL 143 E+ + + + M PT E + D ++ I+SYR+LP + Q +++ E Sbjct: 92 APEVAWVTYGGLNPLQERMCVRPTSETLFCDFYKDEIQSYRDLPKVYNQWCSVVRWEKET 151 Query: 144 RPRFGVMRSREFLMKDA 160 RP +RSREFL ++ Sbjct: 152 RP---FLRSREFLWQEG 165 >gi|85705178|ref|ZP_01036278.1| threonyl-tRNA synthetase [Roseovarius sp. 217] gi|85670500|gb|EAQ25361.1| threonyl-tRNA synthetase [Roseovarius sp. 217] Length = 648 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 16/198 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L L+E AE H+ + R + H + + G W P G + +R +Q Sbjct: 234 KDYLTFLEE----AERRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTVYTTLQDYMRRQQ 289 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTD 116 R G +E++ P + LW SG ++ Y + M + R P + Sbjct: 290 RRGGYVEVNTPQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQ 349 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IF +KSYR+LP + R E G+MR R F DA+ F E S Sbjct: 350 IFNQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIF--CTEDQIESET 407 Query: 176 KMFVSYLR-IFHRLGLKS 192 F+++L I+ LG + Sbjct: 408 ARFIAFLSGIYADLGFPN 425 >gi|317153730|ref|YP_004121778.1| threonyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316943981|gb|ADU63032.1| threonyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 645 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 88/388 (22%), Positives = 157/388 (40%), Gaps = 43/388 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+E + G + P + +LW +SG YD+Y +E + Sbjct: 261 GMILWHPKGGLIRTILEDFERKEHLKRGYQIVQGPLILKRELWEKSGHYDNY-RENMYFT 319 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++++ P + IF+ I+SYR+LP ++++ + R E G+MR R F Sbjct: 320 EIDEQSYGIKPMNCLSHMLIFKRKIQSYRDLPQRYFELGVVHRHEKSGVLHGLMRVRSFT 379 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ P+ + +F +++R +GL AE ++ Sbjct: 380 QDDAHLI-CRPDQLQTEIIGVF-NFVRDI--MGLFGFEFEAE--------------ISTR 421 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 E V D+ + + D + ++ E A Y D+ L DSL ++R Sbjct: 422 PEKSVGTDADW-ELATAALKDALDALGKPYTVNEGDGAFYGPKIDI---ILRDSL--DRR 475 Query: 277 VSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSH 333 I+ ++LP + G DG+ H V + +G++ V+ Sbjct: 476 WQCATIQC--------DFTLPDRFDLVYVGEDGERHRPVMLHRVILGSIERFIGVLIEHF 527 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G +W +AP + L+N+ + EK A L+ G V D E++G + Sbjct: 528 AGALPVW---LAPVQARLLNVT---DAQGEFTEKARAYLAGRGIRVEADTRNEKLGYKVR 581 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHR 421 A + P ++VG K V V I+ R Sbjct: 582 EAQVEKIPYMLVVGDKEVEAGCVNIRSR 609 >gi|162447162|ref|YP_001620294.1| prolyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] gi|161985269|gb|ABX80918.1| prolyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] Length = 474 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 73/143 (51%), Gaps = 3/143 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G YFG +++ F + Y S+G+ + R++ A+I D G+ Sbjct: 225 GQALQSGTSHYFGNEFAHAFDIKFLNDKNELEYAYQTSWGV-STRLIGAIIMVHGDDNGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P VAP ++ ++ I+ +++V A ++I LS VF DD + G +F+ ++ Sbjct: 284 VLPPYVAPTQVVIVPIRPNEEVL-SAVKQIENELSD-KFRVFVDDSDKSPGWKFSEHEMK 341 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL++ +G + + + +V + R Sbjct: 342 GVPLRIEIGPRDLENGQVVVTFR 364 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 16/173 (9%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSY 89 M + +++G + PLG +N+ + E +TG + +P L L+ E + Sbjct: 32 MDYSNTQGFIIYRPLGYGIWENIQNYLNNEFRKTGHQNVYMPMLIPESLFQKEKDHVSGF 91 Query: 90 GKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDEL 143 E + + + +I PT E + + +KSYR+LP + Q +++ Sbjct: 92 APETAMVTTTGVENLSERLIIRPTSEVLFGTHYSKIVKSYRDLPKMYNQWCSVVRWEKTT 151 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG--LKSIP 194 RP +R +EFL ++ ++ T E +K ++M L ++ +LG L +IP Sbjct: 152 RP---FLRGKEFLWQEGHTVHATAEEAKKETHQM----LEVYDKLGKELLAIP 197 >gi|317497213|ref|ZP_07955537.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316895458|gb|EFV17616.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 478 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ + D K YV S+G+ + R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFDIQYTDKDNKLQYVHQTSWGM-STRIIGAIIMVHGDDSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP + ++ I + D E+I RL+ V DD + G +F+ ++ Sbjct: 284 VLPPRIAPVQTMIVPIMQKKEGVLDKAEEIRKRLAS-SYKVKVDDSDKSPGWKFSEQEVR 342 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P ++ +G K + ++ I R T + +SL+E+ Sbjct: 343 GIPTRIEIGPKDIEKNQAVIVRRDTREKIIVSLDEI 378 >gi|312795972|ref|YP_004028894.1| Threonyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454] gi|312167747|emb|CBW74750.1| Threonyl-tRNA synthetase (EC 6.1.1.3) [Burkholderia rhizoxinica HKI 454] Length = 643 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 8/136 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R G +E+ P + LW SG + +Y + Sbjct: 263 LQEEAPGLVFWHPKGWALWQQVEQYLRRRLGEAGYLEVKTPMIMDRSLWERSGHWQNYRE 322 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H +F + SYR+LP F + R+E Sbjct: 323 NMFTTESEKRDYAIKPMNCPGH----VQVFNHSLHSYRDLPLRFAEFGSCHRNEASGALH 378 Query: 148 GVMRSREFLMKDAYSF 163 G+MR R F+ DA+ F Sbjct: 379 GLMRVRGFVQDDAHIF 394 >gi|28898054|ref|NP_797659.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|260362413|ref|ZP_05775365.1| threonine--tRNA ligase [Vibrio parahaemolyticus K5030] gi|260878403|ref|ZP_05890758.1| threonine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|31340445|sp|Q87Q70|SYT_VIBPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|28806268|dbj|BAC59543.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|308091059|gb|EFO40754.1| threonine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|308115583|gb|EFO53123.1| threonine--tRNA ligase [Vibrio parahaemolyticus K5030] Length = 642 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 87/422 (20%), Positives = 155/422 (36%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ +R++ N E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + G +I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTESQIQEEVTSCIKMVYDTYQTFGFDNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S + M+ P I E A Y + L Sbjct: 433 ----EIWDQSEEALKQSLESMEIPY--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + L+NI ++I +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVLMNITDKQS---GYVQEIVQKLQKSGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++VG + + ++ ++ R +++ I Y S+ Sbjct: 576 NEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISS 635 Query: 445 NR 446 + Sbjct: 636 RK 637 >gi|328472989|gb|EGF43837.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 10329] Length = 642 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 87/422 (20%), Positives = 155/422 (36%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ +R++ N E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + G +I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTESQIQEEVTSCIKMVYDTYQTFGFDNIVVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S + M+ P I E A Y + L Sbjct: 433 ----EIWDQSEEALKQSLESMEIPY--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + L+NI ++I +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVLMNITDKQS---GYVQEIVQKLQKSGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++VG + + ++ ++ R +++ I Y S+ Sbjct: 576 NEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISS 635 Query: 445 NR 446 + Sbjct: 636 RK 637 >gi|332708267|ref|ZP_08428248.1| threonyl-tRNA synthetase [Lyngbya majuscula 3L] gi|332352932|gb|EGJ32491.1| threonyl-tRNA synthetase [Lyngbya majuscula 3L] Length = 605 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 80/415 (19%), Positives = 158/415 (38%), Gaps = 56/415 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ W P G + +++EQ + G + + P + DL+ SG + +Y ++M + Sbjct: 219 GLPLWTPKGTVLRTLLEDFLKQEQVKRGYLPVVTPHIGRVDLFKVSGHWQNYKEDMFPMM 278 Query: 97 -----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 A ++ + P + I++S ++SYR LP + +R E G+ Sbjct: 279 AEDEEAAAAEQGFVLKPMNCPFHIQIYKSELRSYRELPMRLAEFGTVYRYEQSGELGGLT 338 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR------AESGPIGG 204 R R F + D++ F + P+ + + L +F L +K+ R A IG Sbjct: 339 RVRGFTVDDSHLF-VMPDQLDQEFLSVVDLILSVFKSLQMKNFKARLSFRDPASDKYIGS 397 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 D + E A + + + F P E A Y D Sbjct: 398 DQAWE---KAQSAIRRAVDTLGMESFEAPGE-----------------AAFYGPKLDFIF 437 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGA 321 + + D R ++G + Y+LP + DG + + + G+ Sbjct: 438 QDILD----------REWQLGTV---QVDYNLPERFDLEYVAEDGTRQRPIMIHRAPFGS 484 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + + ++ + G W +AP + L+ + +++ A++ G Sbjct: 485 LERLTGILIEQYGGDFPFW---LAPVQARLLPV---GDAQLPFAQEVAAKMRSHGIRAEV 538 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D GE++G A+ P+ +VG+K V + + I+ R G M +++V+ Sbjct: 539 DTSGERLGKAIRNAEKAKIPVMSVVGAKEVEANSLNIRTRAAGELGMMPIDQVVE 593 >gi|289550561|ref|YP_003471465.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|315658055|ref|ZP_07910928.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590] gi|289180093|gb|ADC87338.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|315496945|gb|EFU85267.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 645 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 91/406 (22%), Positives = 175/406 (43%), Gaps = 51/406 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + I +++ G + P L + DL+ SG + Y +M + Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYRTSGHWAHYRDDMFPPM 321 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 +L D N++ M+ P + I+++ SYR LP ++ R E G+ R R Sbjct: 322 KL-DENEE-MVLRPMNCPHHMMIYKNKPHSYRELPIRLAELGTMHRYEASGAVSGLQRVR 379 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 + D++ F + P+ K + ++ ++ G + R LS+ Sbjct: 380 GMTLNDSHIF-VRPDQIKDEFKRVVHMIQDVYKDFGFEDYTFR---------LSYR---- 425 Query: 214 ADTGETQVFCSKDFMDFPIPS---ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D + + + D M S E D + + +I E A Y DV ++ + Sbjct: 426 -DPEDKEKYMDDDDMWNKAESMLKEAVDELGLPYVEAIGE--AAFYGPKLDV---QVKTA 479 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAV 328 + + + +S ++ F ++ L T+ G+DG+ H + G+ + R VA + Sbjct: 480 MGKEETLSTAQLD----FLLPERFEL----TYIGSDGEYHRPVVIHRGVVSTMERFVAFL 531 Query: 329 IESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 E + KG +P +AP ++ +I N+ H R+ +++ ++ G V DD E Sbjct: 532 TEET---KG-AFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQ----GVRVEIDDRNE 583 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 ++G + A + P Q++VG K V +++V + R G ++ +LE Sbjct: 584 KMGYKIREAQMQKIPYQIVVGDKEVENNQVNV--RQYGSQDQQTLE 627 >gi|163868456|ref|YP_001609665.1| threonyl-tRNA synthetase [Bartonella tribocorum CIP 105476] gi|189083598|sp|A9IVB0|SYT_BART1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161018112|emb|CAK01670.1| Threonyl-tRNA synthetase [Bartonella tribocorum CIP 105476] Length = 658 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 101/450 (22%), Positives = 171/450 (38%), Gaps = 51/450 (11%) Query: 5 KYFLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H+ + R + H + G+ W G K N+ +R Sbjct: 233 KAYLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGMIFWHQKGWKMFQNLINYMRRRL 288 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL---ADRNDKAMIYG--PTHEEVMTD 116 + E++ P + LW SG + Y + M + A+ D IY P + Sbjct: 289 DDHQYAEVNAPQVLDRSLWEISGHWGWYKENMFKAIPAAEDLDHEHIYALKPMNCPGHVQ 348 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF--DLTPEGSKHS 173 IF+ +KSYR+LP + L R E G+MR R F DA+ F D S Sbjct: 349 IFKHGLKSYRDLPIRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTDEQLAAECLS 408 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDF 230 N + +S + G K I ++ + P +G D L D E+ M+ Sbjct: 409 INDLILS---TYADFGFKEISLKLSTRPEKRVGSD------ALWDHAES-------IMES 452 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + T F I SI+ A Y + L D++ + ++ F Sbjct: 453 VLKTIETKFAGQIK-TSILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQLDFNLPERF 508 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 G Y K V + G+M ++ + G +W +AP +I Sbjct: 509 GAFY-------IDKDSEKRQPVMIHRAIFGSMERFLGILIENFAGHMPLW---LAPEQIV 558 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + I + + +KI ARL VG D E+I + L P+ ++ G + Sbjct: 559 VATITSE---ANEYAQKITARLKAVGLSATTDLRNEKINYKIREHSLQKVPVILVCGKRE 615 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASH 440 + V ++ + + +S+E+ I S+ Sbjct: 616 AETNSVNMRRLGSPNQTLLSVEDAIKQLSN 645 >gi|209879794|ref|XP_002141337.1| threonyl-tRNA synthetase family protein [Cryptosporidium muris RN66] gi|209556943|gb|EEA06988.1| threonyl-tRNA synthetase family protein [Cryptosporidium muris RN66] Length = 743 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 95/419 (22%), Positives = 156/419 (37%), Gaps = 56/419 (13%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G + + + IR E G E+ P + S DLW SG Y +Y KE + Sbjct: 348 SVGSCFWLPPGARIYNKMIEFIRSEYRIRGFEEVVTPNIFSCDLWKTSGHYFAY-KENMF 406 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L + K P + IFR SY+ LP + R+EL G+ R R Sbjct: 407 LFEVEKKEWGLKPMNCPGHCIIFRHMNPSYKQLPIRMADFGVLHRNELSGALNGLTRVRR 466 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F T E + ++ +LG S + + P Sbjct: 467 FQQDDAHIF-CTAEQIQSEVFAALEFLFFVYDKLGF-SFNLYLGTMP------------- 511 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDVHNEKLF 268 K+ + E+ + ++LN QW A Y D+ L+ Sbjct: 512 ----------KEHLGTREKWEDAENSLKLALNRTGYQWKVNEGDGAFYGPKIDIM---LW 558 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD---------GKDHYVQMGSYGI 319 D+L + ++ F +Y + +G D G V + + Sbjct: 559 DALKRPHQCGTIQLDFQLPIRFNLQYRSDDNILTEGGDHNLDEELKPGYKRPVIIHRAIL 618 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGC 377 G++ + AVI + GK W ++P + ++ I K+HD + I + L +G Sbjct: 619 GSIERMVAVILENTGGKLPFW---LSPRQAIVLPISEKSHDYA-----KSIESELCCMGY 670 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE-DMSLEEVI 435 DV D I + A LL + +IVG + ++ R + + +M L ++I Sbjct: 671 DVGADYSSSTINRKIREAQLLQWNFMLIVGENEAKSGSITVRSRDSSTSQRNMILSDLI 729 >gi|73919802|sp|Q5ZS05|SYT_LEGPH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 637 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 84/396 (21%), Positives = 147/396 (37%), Gaps = 54/396 (13%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G + +R G E+ P L LW +SG + ++ EM Sbjct: 259 APGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKSGHWANFRDEMF- 317 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + ++ P I+ +KSYR+LP + R E G+MR R Sbjct: 318 VTETENRHYAVKPMSCPCHVQIYNHGLKSYRDLPLRLSEFGNCHRCEPSGALHGLMRVRN 377 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFI 211 + DA+ F T + + M ++ G I R P +G D Sbjct: 378 MVQDDAHIF-CTEDQIQSEVAMMLELVQSVYKDFGFTEIKYRLALRPEKRVGSD------ 430 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + D ET + + N ++ D AP + K+ SL Sbjct: 431 DVWDKAETA-------LKLAMQGRNIEWVD------------AP--GEGAFYGPKIECSL 469 Query: 272 PENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVV 325 + +G I+ GT +S+P + A++ DG K V + +G+ Sbjct: 470 SDC---------LGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + GK +W ++P + ++ I + EK+ L K G +D Sbjct: 521 MGILIEHYAGKLPLW---LSPVQAIVLTISEKQN---EYAEKVRKTLQKRGIRANFDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG K V + +V ++ R Sbjct: 575 EKIGFKIREHTLQKIPYLLVVGDKEVENCQVAVRTR 610 >gi|148548433|ref|YP_001268535.1| threonyl-tRNA synthetase [Pseudomonas putida F1] gi|166225483|sp|A5W5E1|SYT_PSEP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148512491|gb|ABQ79351.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Pseudomonas putida F1] Length = 640 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 72/187 (38%), Gaps = 3/187 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R Q G E+ P + LW SG + +Y + Sbjct: 255 LQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDRILWERSGHWSNYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTSSESRDYAV-KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F+ DA+ F T E K L ++ G I M+ + P S E Sbjct: 374 RVRGFVQDDAHIF-CTEEQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTRPAKRVGSEEL 432 Query: 211 IVLADTG 217 A+T Sbjct: 433 WDRAETA 439 >gi|167034477|ref|YP_001669708.1| threonyl-tRNA synthetase [Pseudomonas putida GB-1] gi|189083619|sp|B0KKR8|SYT_PSEPG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166860965|gb|ABY99372.1| threonyl-tRNA synthetase [Pseudomonas putida GB-1] Length = 640 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 72/187 (38%), Gaps = 3/187 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R Q G E+ P + LW SG + +Y + Sbjct: 255 LQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDRILWERSGHWSNYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTSSESRDYAV-KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F+ DA+ F T E K L ++ G I M+ + P S E Sbjct: 374 RVRGFVQDDAHIF-CTEEQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTRPAKRVGSEEL 432 Query: 211 IVLADTG 217 A+T Sbjct: 433 WDRAETA 439 >gi|238919782|ref|YP_002933297.1| threonyl-tRNA synthetase [Edwardsiella ictaluri 93-146] gi|259516479|sp|C5B846|SYT_EDWI9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238869351|gb|ACR69062.1| threonyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146] Length = 642 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 89/415 (21%), Positives = 152/415 (36%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 + D E + + P P E + I Sbjct: 432 ----EIWDRAEEDLAAALQENGIPFEYQPGEGAFYGPKIEFT------------------ 469 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 L D L R + G + +SLP +SA++ G + + M I G+ Sbjct: 470 --LHDCLD-------RAWQCGTV---QLDFSLPGRLSASYVGENNERVVPVMIHRAILGS 517 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 M ++ G +P +AP + ++NI + E++ +L G V Sbjct: 518 MERFIGILTEEFAG---FFPTWLAPVQAVVMNITDSQA---EYVEELSKKLQAAGIRVKS 571 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P ++ G K V KV ++ R MS+++VI Sbjct: 572 DLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGVMSIDDVIK 626 >gi|212635267|ref|YP_002311792.1| threonyl-tRNA synthetase [Shewanella piezotolerans WP3] gi|226701407|sp|B8CME8|SYT_SHEPW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|212556751|gb|ACJ29205.1| Threonyl-tRNA synthetase, class IIa [Shewanella piezotolerans WP3] Length = 642 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 143/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR++ + E+ P + LW SG +D Y Sbjct: 256 MQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRVLWERSGHWDKYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 GMFTTNSESREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + + + G K+I ++ + P IG D Sbjct: 375 RVRGFTQDDAHVF-CTEEQVQQEVSACIQMVYDTYETFGFKNIVVKLSTRPEKRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ Q S D +P E + I L Sbjct: 432 -DMWDRAEEALKQALKSNDIEFEILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + GK W +AP ++ ++NI D E++ + G D Sbjct: 521 FLGILIEEYAGKFPTW---LAPQQVVVMNITDKQS---DYAEEVVNLFKEHGIRATKDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|221194423|ref|ZP_03567480.1| threonyl-tRNA synthetase [Atopobium rimae ATCC 49626] gi|221185327|gb|EEE17717.1| threonyl-tRNA synthetase [Atopobium rimae ATCC 49626] Length = 588 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 90/393 (22%), Positives = 156/393 (39%), Gaps = 60/393 (15%) Query: 42 WLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRN 100 WLP G + + E + E+ P + S LW SG +D Y + M + D Sbjct: 218 WLPNGMAVRNALTDYWHEMMVKFNYEEVLTPQILSRSLWETSGHWDHYKENMYTTSVDEE 277 Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKD 159 D A+ P + I+++ +SYR+LP + L R E++ G+ R REF D Sbjct: 278 DFAI--KPMNCPGACLIYKNRPRSYRDLPLKLAEAGLDHRYEMKGALHGLFRVREFTQDD 335 Query: 160 AYSF----DLTPEGSKHSYNKMFVSYLRIF---HRLGLKSIPMRAESGPIGGDLSHEFIV 212 A+ F +T + + S+ + +Y F +R+ L + P +G D E Sbjct: 336 AHIFIRPDQITEQVADASH--LITAYYAQFGFPYRVELSTRP----ENSMGSDEDWE--- 386 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 A+ G KD + E+ D +++ E A Y D H L D L Sbjct: 387 RAEQG------LKDAL------ESMGIDYVLN-----EGDGAFYGPKIDFH---LTDCL- 425 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG---KDHYVQMGSYGIGAMRVVAAVI 329 R + G I + LP + + D K + + G G+ ++ Sbjct: 426 ------GRSWQCGTI---QLDFQLPHNFELEYVDSDGTKKQPIMIHRAGFGSFDRFIGIL 476 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 ++GK +W +AP ++ ++ + + R+ ++ L G V D+ E+IG Sbjct: 477 TEHYEGKFPVW---LAPCQVKVLPVS---EKSREYAHEVAGALQAAGIRVKVDNRDEKIG 530 Query: 390 SQFAVADLLG-FPLQVIVGSKFVSDSKVEIKHR 421 + A L P +I+G K V + ++ R Sbjct: 531 YKIREARSLDRVPYMLIIGEKEVEAHNISVRDR 563 >gi|52842920|ref|YP_096719.1| threonyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630031|gb|AAU28772.1| threonyl tRNA synthase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 646 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 84/396 (21%), Positives = 147/396 (37%), Gaps = 54/396 (13%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G + +R G E+ P L LW +SG + ++ EM Sbjct: 268 APGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKSGHWANFRDEMF- 326 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + ++ P I+ +KSYR+LP + R E G+MR R Sbjct: 327 VTETENRHYAVKPMSCPCHVQIYNHGLKSYRDLPLRLSEFGNCHRCEPSGALHGLMRVRN 386 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFI 211 + DA+ F T + + M ++ G I R P +G D Sbjct: 387 MVQDDAHIF-CTEDQIQSEVAMMLELVQSVYKDFGFTEIKYRLALRPEKRVGSD------ 439 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + D ET + + N ++ D AP + K+ SL Sbjct: 440 DVWDKAETA-------LKLAMQGRNIEWVD------------AP--GEGAFYGPKIECSL 478 Query: 272 PENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVV 325 + +G I+ GT +S+P + A++ DG K V + +G+ Sbjct: 479 SDC---------LGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERF 529 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + GK +W ++P + ++ I + EK+ L K G +D Sbjct: 530 MGILIEHYAGKLPLW---LSPVQAIVLTISEKQN---EYAEKVRKTLQKRGIRANFDLRN 583 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG K V + +V ++ R Sbjct: 584 EKIGFKIREHTLQKIPYLLVVGDKEVENCQVAVRTR 619 >gi|301089746|ref|XP_002895146.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4] gi|262101719|gb|EEY59771.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4] Length = 744 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 88/409 (21%), Positives = 159/409 (38%), Gaps = 42/409 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G WLP G + IRE+ G E+ P + + +LW SG Y KE Sbjct: 360 HSLSPGSGFWLPHGSAIYFKLLKFIREQYRARGYTEIITPNIYNMELWNISGHAQHY-KE 418 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + + D + P + + +F +SYR LP + R+EL G+ R Sbjct: 419 NMFVFDVEGQEYALKPMNCPAASLMFDFRQRSYRELPIRLADCGVLHRNELSGALTGLTR 478 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLK-SIPMRAESGPIGGDLSHE 209 R F DA+ F + K + F+++++ ++ G++ ++ + G+L Sbjct: 479 VRRFQQDDAHIFCRDDQIKKEVLD--FLTFMKYVYDVFGIEFNLELSTRPEKAMGELEQ- 535 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW--TAPYAATSDVHNEKL 267 + ETQ+ + D+ + V A Y D+ + Sbjct: 536 ----WERAETQLAQA--------------LDEFVGAGKWVVNPGDGAFYGPKIDIM---I 574 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D+L + + ++ F KY + FK + + YG R VA Sbjct: 575 TDALKRQHQCATVQLDFQLPIRFNLKYRTDDAENFK----RPVIIHRAIYG-SLERFVAV 629 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++E + GK W ++P +I ++ + A D ++ L + G DV DD G+ Sbjct: 630 LVE-HYAGKFPFW---LSPRQILIVTVGA---AFVDYGYEVKDALFRAGFDVEIDDSGKT 682 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + + + + ++VG+ V I+ R +R +LEE I+ Sbjct: 683 LNKKIREGQMAHYNFILVVGAHEKETRSVNIRTRDNKVRGTKTLEEAIS 731 >gi|149926877|ref|ZP_01915136.1| threonyl-tRNA synthetase [Limnobacter sp. MED105] gi|149824429|gb|EDM83647.1| threonyl-tRNA synthetase [Limnobacter sp. MED105] Length = 635 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 9/174 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G V +R+ G E+ P + LW +SG +D+Y + Sbjct: 255 MQDEAPGLVFWHPKGWALWQQVEQYMRKVYVDGGYQEIRCPQILDRKLWEKSGHWDNYKE 314 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ + P H EV F+S ++SYR+LP + + R+E Sbjct: 315 NMFTTESEKRDYALKPMNCPGHIEV----FKSDLRSYRDLPMRYGEFGACHRNESSGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 G+MR R F D + F T + + K ++++ G I ++ P Sbjct: 371 GIMRVRGFTQDDGHIF-CTEDQVQEEVTKFNQVAMQVYADFGFNEINVKLALRP 423 >gi|65319684|ref|ZP_00392643.1| COG0441: Threonyl-tRNA synthetase [Bacillus anthracis str. A2012] Length = 485 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 100 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 159 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 160 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 218 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 219 LNGLLRVRTFCQDDAHLF-VTPE 240 >gi|34763461|ref|ZP_00144407.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237741623|ref|ZP_04572104.1| threonyl-tRNA synthetase [Fusobacterium sp. 4_1_13] gi|294785766|ref|ZP_06751054.1| threonine--tRNA ligase [Fusobacterium sp. 3_1_27] gi|27886876|gb|EAA24002.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229429271|gb|EEO39483.1| threonyl-tRNA synthetase [Fusobacterium sp. 4_1_13] gi|294487480|gb|EFG34842.1| threonine--tRNA ligase [Fusobacterium sp. 3_1_27] Length = 637 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 90/447 (20%), Positives = 181/447 (40%), Gaps = 56/447 (12%) Query: 3 RSKYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 R K L +++E AE H+ + L + ++ G +LP G + + + R+ Sbjct: 226 RLKKHLKLMEE----AEKRDHRKLGKELELFFLSEYGPGFPFFLPKGMIIRNVLIDLWRK 281 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E + G +++ P + + +LW SG + +Y +E + ++ ++ P + F+ Sbjct: 282 EHEKAGYLQLETPIMLNKELWEISGHWFNY-RENMYTSEIDELEFAIKPMNCPGGVLSFK 340 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + SY++LP ++ R E G+MR R F D++ F +TP+ + Sbjct: 341 HQLHSYKDLPARLAELGRVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEI---- 395 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 +G+ ++ + S G E+ + T + S++ D + Sbjct: 396 ---------IGVVNLIDKFYSKLFG----FEYEIELSTKPEKAIGSQEIWDMAEAALAGA 442 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYS 295 D + I A Y D K+ D+ +G ++ GT ++ Sbjct: 443 LDKLGRKYKINPGDGAFYGPKLDF---KIKDA-------------IGRMWQCGTIQLDFN 486 Query: 296 LP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 LP T+ G DG+ H V + G++ ++ + G +W +AP ++ ++ Sbjct: 487 LPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMW---LAPVQVKVL 543 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFV 411 + + C ++I +L ++G DD E IG + A+ P+Q+I+G V Sbjct: 544 TL---NDECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGKYKIPMQLIIGKNEV 600 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYA 438 + V I+ + + L+E NY Sbjct: 601 ENKGVNIRRFGSKDQFTKPLDEFYNYV 627 >gi|319407312|emb|CBI80953.1| Threonyl-tRNA synthetase [Bartonella sp. 1-1C] Length = 654 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 21/215 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H+ + R + H + S G+ W P G K N+ + +R Sbjct: 233 KAYLHMLEE----AEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRL 288 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA----DRNDKAM-IYGPTHEEVMTD 116 + E+ P + LW SG + Y + M + D ND+ P + Sbjct: 289 DNHKYAEVQAPQVLDKSLWEISGHWGWYKENMFKTIPAADDWNDECTYALKPMNCPGHVQ 348 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKH--S 173 IF+ +KSYR+LP + L R E G+MR R F DA+ F + + S Sbjct: 349 IFKHGLKSYRDLPVRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEEQLADECLS 408 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 N + +S + G K I ++ + P +G D Sbjct: 409 INDLILS---TYADFGFKEISLKLSTRPEKRVGSD 440 >gi|298245368|ref|ZP_06969174.1| prolyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] gi|297552849|gb|EFH86714.1| prolyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] Length = 483 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 7/149 (4%) Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G ++ F ADG+ Y S+G+ + R++ +I D G+I P +APF++ Sbjct: 236 LGQNFAKSFDIQFLDADGERKYCATTSWGL-STRMIGGIIMVHGDPSGLILPPRLAPFQV 294 Query: 350 SLINIKAHDQ---VCRDACEKIYARLS-KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 ++ I DQ V +A E++ L KV V DD G ++ ++ G PL++ Sbjct: 295 VIVPIWRKDQDRAVVFEAVERLQKMLKGKVRVKV--DDSDNTPGWKYNEWEMRGVPLRLE 352 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G + V ++ V + RL +E +S++ + Sbjct: 353 IGPRDVQNNNVVLVSRLDRSKEFVSIDNL 381 >gi|146293114|ref|YP_001183538.1| threonyl-tRNA synthetase [Shewanella putrefaciens CN-32] gi|166225500|sp|A4Y706|SYT_SHEPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145564804|gb|ABP75739.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella putrefaciens CN-32] Length = 642 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 81/397 (20%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR + N+ E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + + G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTDDQVQEEVSACIQMVYDTYSTFGFENIVVKLSTRPEKRIGDDAM 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ Q + + +P E + I L Sbjct: 434 WD---RAEEALKQALRANNIEFTLLPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G+ +P +AP ++ ++NI D ++I + G +D Sbjct: 521 FLGILIEEYAGR---FPTWLAPMQVVVMNITDKQA---DYVQEIVKFFKEQGIRASFDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|322369853|ref|ZP_08044415.1| prolyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320550189|gb|EFW91841.1| prolyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 485 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/330 (20%), Positives = 123/330 (37%), Gaps = 63/330 (19%) Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLM 157 D D+ + + PT E ++T ++S+R+LP Q R E R++EFL Sbjct: 104 DELDERLAFRPTSESIITPFMSQWVRSHRDLPLRLNQWCSVIRWEATDTKPFFRTKEFLW 163 Query: 158 KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG 217 ++ ++ T E + Y R+F + +IP+ P H+ ADT Sbjct: 164 QEGHTAHETEEEAWDETMTRLEQYQRVFEE--VLAIPVMPGRKP-----EHDKFPGADTT 216 Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 T + +L +P+ K V Sbjct: 217 TT----------------------VEAL-------------------------MPDGKSV 229 Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 Y G ++ F + + S+G+ + R + A+I + D +G Sbjct: 230 QG-----ATSHYLGQGFAEAYDLYFTDENEDERVAHTTSWGL-SWRALGALIMTHSDEQG 283 Query: 338 IIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ-IGSQFAV 394 + P ++AP ++ ++ I + + + E I L + G V DD E+ G +F Sbjct: 284 FVCPPTLAPEQVVIVPIWQEENREEVLSYAEGIAEDLEEAGVRVELDDRDERNPGFKFNE 343 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +L G P++ +G V D ++ + HR G Sbjct: 344 WELKGVPVRFEIGPHEVEDDEITVVHRPDG 373 >gi|150389418|ref|YP_001319467.1| threonyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|149949280|gb|ABR47808.1| threonyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 636 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 84/402 (20%), Positives = 150/402 (37%), Gaps = 53/402 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +++ G + P G + + R E + G E+ P + + LW +SG +D Y + Sbjct: 257 LNEEGPGFPFFHPNGMIVRNELENFWRREHTKRGYEEIKTPIILNEQLWKQSGHWDHY-Q 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + +D P + +++ + SYR+LP ++ L R EL G+M Sbjct: 316 ENMYFTNIDDANYAVKPMNCPGSILMYKRKMHSYRDLPIRMGELGLVHRHELSGALHGLM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKM-FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 R R F DA+ F L + M FV Y + G K Sbjct: 376 RVRCFTQDDAHIFMLPEQIKDEILGVMNFVDYF--YKVFGFK------------------ 415 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + + T + + D I S ++ + E A Y D H E Sbjct: 416 YHIELSTRPKDSMGTDEEWDLAINSLREALEENNVKYKLNEGDGAFYGPKIDFHLEDA-- 473 Query: 270 SLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMR 323 +G + GT + +P + GADG+ H + + G++ Sbjct: 474 --------------IGRTWQCGTIQLDFQMPQRFDINYVGADGEKHRPIMIHRVIFGSIE 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ + GK +P +AP + ++ I H + R K+ ++ + V D Sbjct: 520 RFIGILIEHYAGK---FPAWLAPVQAKILPITDNHLEYAR----KLQQQMLEKDIRVVID 572 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + E+IG + A L P +++G K V V ++ R G Sbjct: 573 ERSEKIGFKIREARLERVPYMLVIGDKEVESETVAVRAREEG 614 >gi|120598808|ref|YP_963382.1| threonyl-tRNA synthetase [Shewanella sp. W3-18-1] gi|166225502|sp|A1RJI3|SYT_SHESW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120558901|gb|ABM24828.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella sp. W3-18-1] Length = 642 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 81/397 (20%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR + N+ E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + + G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTDDQVQEEVSACIQMVYDTYSTFGFENIVVKLSTRPEKRIGDDAM 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ Q + + +P E + I L Sbjct: 434 WD---RAEEALKQALRANNIEFTLLPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPNRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G+ +P +AP ++ ++NI D ++I + G +D Sbjct: 521 FLGILIEEYAGR---FPTWLAPMQVVVMNITDKQA---DYVQEIVKFFKEQGIRASFDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|330819285|ref|YP_004348147.1| threonyl-tRNA synthetase [Burkholderia gladioli BSR3] gi|327371280|gb|AEA62635.1| threonyl-tRNA synthetase [Burkholderia gladioli BSR3] Length = 682 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 2/170 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G W P G + A +R Q +E++ P + LW SG + +Y Sbjct: 275 QEDAPGAVFWHPRGWTVFRELIAYMRRRQEEAAYVEVNSPDVMDRSLWEISGHWLNYRDH 334 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M A + +++ P + ++R +KSYR+LP + R E G++R Sbjct: 335 MFTTATEDGRSLALKPMNCPGSVLLYRHGLKSYRDLPIRMGEFGKVHRYEPSGALHGLLR 394 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 R F DA+ + TP + L I+ + G + + ++ + P Sbjct: 395 VRHFTQDDAHIY-CTPAQMDQECRAVVALVLDIYRQFGFEEVRIKLSTRP 443 >gi|318605898|emb|CBY27396.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica Y11] Length = 642 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 83/398 (20%), Positives = 147/398 (36%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 D +E+ D ++ N I + A E Sbjct: 432 ---------------------DLWTRAED-DLAAALTENGIPFDYQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L D L R + G + +SLP +SA++ G + M I G+M Sbjct: 470 LHDCLD-------RAWQCGTV---QLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSME 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++NI D +++ +L G D Sbjct: 520 RFIGILTEEYAG---FFPTWLAPVQVVVMNITDSQS---DYVQQVTKKLQDAGIRAKADL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V K+ ++ R Sbjct: 574 RNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTR 611 >gi|188586439|ref|YP_001917984.1| Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] gi|229558041|sp|B2A5P2|SYT_NATTJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|179351126|gb|ACB85396.1| Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 636 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 84/393 (21%), Positives = 153/393 (38%), Gaps = 50/393 (12%) Query: 53 VNAII---REEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPT 109 +N +I R E + G E+S P + + LW SG +D + +E + + +D+ P Sbjct: 275 INELIDFWRREHRKAGYQEISTPIILNRGLWERSGHWDHF-QENMYFTEIDDEDFAVKPM 333 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 + ++ +++ SYR+ P ++ R EL G++R+R F DA+ F + P Sbjct: 334 NCPGAMLVYNNNMYSYRDFPLRVAELGKVHRHELSGALHGLLRARSFTQDDAHIF-MLPS 392 Query: 169 GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 + + R + G + V T + S + Sbjct: 393 QVEEELENVINLVDRFYSVFGFN------------------YYVELSTKPEKAMGSDEIW 434 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAATSD---VHNEKLFDSLPENKRVSARGIEVG 285 D I +L S++E+ Y + K+ L + S + + Sbjct: 435 DRAIN----------ALKSVLEKRGIKYIVNEGDGAFYGPKIDFQLEDAIGRSWQCSTIQ 484 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 F ++ L T+ G DG+ H V + GA+ A++ ++GK +W + Sbjct: 485 LDFLLPERFDL----TYIGEDGQKHRPVMIHRVIYGAIERFFALLIEHYEGKFPLW---L 537 Query: 345 APFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ 403 AP + +I I H + +D I +L G D E+IG + A L P Sbjct: 538 APRQAVIIPIADRHMEYGKD----ITKQLESEGIRADLDQRNEKIGYKIRDAQLKKVPYM 593 Query: 404 VIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +IVG V + V ++ R G S+ E+++ Sbjct: 594 LIVGDDEVENKTVSVRTREDGDIGSKSVAELVD 626 >gi|123442189|ref|YP_001006170.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166225517|sp|A1JMJ9|SYT_YERE8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122089150|emb|CAL11992.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 642 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 83/398 (20%), Positives = 147/398 (36%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 D +E+ D ++ N I + A E Sbjct: 432 ---------------------DLWTRAED-DLAAALTENGIPFDYQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L D L R + G + +SLP +SA++ G + M I G+M Sbjct: 470 LHDCLD-------RAWQCGTV---QLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSME 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++NI D +++ +L G D Sbjct: 520 RFIGILTEEYAG---FFPTWLAPVQVVVMNITDSQS---DYVQQVTKKLQDAGIRAKADL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V K+ ++ R Sbjct: 574 RNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTR 611 >gi|75908999|ref|YP_323295.1| threonyl-tRNA synthetase [Anabaena variabilis ATCC 29413] gi|75702724|gb|ABA22400.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Anabaena variabilis ATCC 29413] Length = 615 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 8/171 (4%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 Q G+ W P G + +++EQ + G + + P + DL+ SG + Y ++ Sbjct: 224 EQVGPGLPLWTPKGTLLRSTLEQFLQQEQLKRGYLPVVTPHIARVDLFKTSGHWQKYKED 283 Query: 93 MLRL------ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M L A ++ + P + I++S ++SYR LP + +R E Sbjct: 284 MFPLMAEDEAAAAIEQGFVLKPMNCPFHIQIYKSELRSYRELPMRLAEFGTVYRYEQSGE 343 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 G+ R R F + D++ F +TPE + + L +F L LK+ R Sbjct: 344 LGGLTRVRGFTVDDSHLF-VTPEQLDSEFLNVVDLILSVFKSLQLKNFKAR 393 >gi|291087823|ref|ZP_06572117.1| proline--tRNA ligase [Clostridium sp. M62/1] gi|291073860|gb|EFE11224.1| proline--tRNA ligase [Clostridium sp. M62/1] Length = 493 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 3/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ F D K YV S+G+ R++ A+I D G+ Sbjct: 241 GKALQSGTSHNFGDGFAKAFGIQFSDKDNKLKYVHQTSWGM-TTRLIGAIIMVHGDDSGL 299 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ ++ I+ + D ++ LS G V DD + G +F+ +++ Sbjct: 300 VLPPRIAPTQVVIVPIRQQAEGVLDKAYELKDILS--GFSVKVDDSDKSPGWKFSESEMR 357 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P++V +G K + ++ + R T + +SL+E+ Sbjct: 358 GIPVRVEIGPKDLEQNQAVLVRRDTHEKITVSLDEI 393 >gi|13541912|ref|NP_111600.1| prolyl-tRNA synthetase [Thermoplasma volcanium GSS1] gi|74581167|sp|Q979Q5|SYP_THEVO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|14325343|dbj|BAB60247.1| tRNA synthetase Pro [Thermoplasma volcanium GSS1] Length = 462 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 4/145 (2%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 S R +++G I +GT +S + DG YV ++G+ + R++AA+I D KG Sbjct: 215 SGRSLQIGTIHQYGTNFSKNYDIKYLKEDGTFEYVHQTTFGM-SERLLAAIIGIHGDDKG 273 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVAD 396 +I P ++AP ++ ++ I + V R A + I L+ +G D+ G ++ + Sbjct: 274 LILPPAIAPIQVVIVPIPG-EGVERYA-KDIETTLNGIGIRCHVDNRDNYTPGYKYNDWE 331 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 + G PL++ VG + + + V + R Sbjct: 332 MRGVPLRIEVGERELKEKTVTLAAR 356 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 27/170 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL----------------W 80 KG+ W P G K + ++ IIR ++ E++ P L S + W Sbjct: 29 KGMNVWRPYGWKIMKLIDNIIRNAVDKHSFDEVNFPVLISRGMLEVEFEHIRGFENEIYW 88 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 V G GKE L ++ + PT E M +F ++S+ +LP YQI +R Sbjct: 89 VTKG-----GKEKL------EEELALRPTSESAMYPMFSLWVRSHADLPLKIYQIVSVYR 137 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 E + +R RE +A++ + E ++ ++ + + I L L Sbjct: 138 YETKHTRSFIRIREIHFFEAHTAHESYEDAEKQMDEYRIIWTEIADALCL 187 >gi|300814791|ref|ZP_07095034.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511099|gb|EFK38356.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 636 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 86/420 (20%), Positives = 162/420 (38%), Gaps = 54/420 (12%) Query: 13 ENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 E +AE H+ + L +H+ G + P G +N+ + + G E+ Sbjct: 232 EKREEAEKRDHRKLGRELDLFSMHEEGPGFPFFHPNGMIIRNNLLSWWKNVLQERGYGEI 291 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + + DLW SG +D Y KE + + +++ P + T I+ + SYR+LP Sbjct: 292 LTPVILNEDLWHRSGHWDHY-KENMYFTEIDEEGYAVKPMNCPGSTLIYSTTPHSYRDLP 350 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + + L R EL G+ R R F DA+ + L + + + ++ L ++ Sbjct: 351 LRYAEFGLVHRHELSGALHGLFRVRSFTQDDAHIYCLPNQIKSEVFEIIDLANL-LYDTF 409 Query: 189 GLK-SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G K S+ + GDL E + + + +P + Sbjct: 410 GFKYSVELSTRPDDYMGDLE-------SWNEAEKALKEALEEKGMPY------------T 450 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLPMS--ATF 302 I E A Y D H E +G + GT + LP + T+ Sbjct: 451 INEGDGAFYGPKIDYHLEDA----------------IGRTWQCGTIQLDFQLPQNFELTY 494 Query: 303 KGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG K V + G++ ++ GK +W ++P ++ +I + + Sbjct: 495 VAEDGSKKRPVMLHRALFGSVERFMGILIEHFAGKFPLW---LSPVQVEIIPV---SEKF 548 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +++ +L K G V D+ E++G + A L +++G K + K+ ++ R Sbjct: 549 KPYAGEVFDQLKKAGIRVKIDERAEKVGYKIREAQLKKVNYMLVIGEKETASHKLSVRKR 608 >gi|323143349|ref|ZP_08078037.1| threonine--tRNA ligase [Succinatimonas hippei YIT 12066] gi|322416867|gb|EFY07513.1| threonine--tRNA ligase [Succinatimonas hippei YIT 12066] Length = 644 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 92/428 (21%), Positives = 159/428 (37%), Gaps = 52/428 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + KL L Q + G+ W G + +RE ++ IE+ P + Sbjct: 242 RDHRVLGKKLDL--FHFQQEAPGMVFWHNDGWTIYRVIENFMREMLHKYHYIEVKTPQIM 299 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 LW SG +D Y + M + N I P + IF S +SYR+LP + Sbjct: 300 DRVLWERSGHWDKYAENMFTTSSENRDYAI-KPMNCPGAIQIFNSRTRSYRDLPIRMAEF 358 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 R+E G++R R F DA+ F T + + + G + Sbjct: 359 GNCHRNEPSGSLHGLLRVRAFEQDDAHIF-CTEDQIMTEVSDCIRMVYDTYSNFGFTKVD 417 Query: 195 MRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 ++ + P IG D + D E D + + LN++ + Sbjct: 418 VKLSTRPEKRIGSD------EIWDKAE------------------ADLVEALKLNNLEYE 453 Query: 252 WTAPYAATSDVHNE-KLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGK 308 A E L DSL R + G + +SLP + A + G D + Sbjct: 454 LQPGEGAFYGPKIEFTLHDSLD-------RAWQCGTV---QLDFSLPARLDAHYIGEDNQ 503 Query: 309 DHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 +H V + +G++ V+ G W +AP + ++NI QV D ++ Sbjct: 504 EHTPVMIHRAMLGSIERFLGVLTEEFAGSFPTW---LAPIQAVVMNI-TDGQV--DYVKQ 557 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + +L + G V D +++G + L+ P ++ G + V ++ R Sbjct: 558 VAQKLDEAGIRVKSDLRNDKVGFKIREHTLMHVPYMLVCGDREAESGMVAVRTRKGQDLG 617 Query: 428 DMSLEEVI 435 M L+++I Sbjct: 618 AMKLDDLI 625 >gi|320590732|gb|EFX03175.1| threonyl-tRNA synthetase [Grosmannia clavigera kw1407] Length = 752 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 95/434 (21%), Positives = 173/434 (39%), Gaps = 47/434 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + + I E ++ +E+ P + +ADLW SG ++ Y + Sbjct: 314 FHKLSPGSPFFLPHGMRIFNALKEFILSEYHKRDYVEVMSPNMFNADLWRTSGHWEHYQE 373 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +M L + + P + IF S +SYR LP + + R+E G+ Sbjct: 374 DMFTL-EVEKQQWALKPMNCPGHCVIFGSRERSYRELPLRMAEFGILHRNEASGALSGLT 432 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLK---SIPMRAES------- 199 R R F+ D++ F E S + +LR ++ +LG+K + R E Sbjct: 433 RVRRFIQDDSHIF--CEEDQIGSEIRDLFDFLRTVYGKLGMKFRLKLSTRPEKYLGNLET 490 Query: 200 -GPIGGDLSH---EFIVLA------DTGETQVFCSKDFMDFPIPSENTDFDDIISLN--- 246 L H EF + + G+ + K +D I + +L Sbjct: 491 WDKAEATLQHALEEFTKESGAEWSLNPGDGAFYGPK--IDIQIMDALRRWHQCATLQLDF 548 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + +Q+ Y + ++ D E K V + +E ++ SA A Sbjct: 549 QLPQQFNLSYMTAASSNS----DGKAEAKTVETKPVEAETKDGKDDSKAVTASAAQTLAP 604 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDAC 365 G V + +G+ A + GK WP ++P +I L+ + A + R+ Sbjct: 605 GYSRPVMIHRAVLGSFERFIATLSEHFAGK---WPFWLSPRQILLVPVMADAEDYVREVQ 661 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR---- 421 + + AR V D+ + M ++I + +L + ++GSK + D V I+ R Sbjct: 662 KVLKARGFYVDSDLGANTMNKKIRN----GQVLQYNFIFVLGSKEMQDRSVSIRVRDSKG 717 Query: 422 -LTGIREDMSLEEV 434 LT + D+ +E + Sbjct: 718 DLTTLSLDVVVERL 731 >gi|291614198|ref|YP_003524355.1| threonyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] gi|291584310|gb|ADE11968.1| threonyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] Length = 637 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 90/414 (21%), Positives = 161/414 (38%), Gaps = 56/414 (13%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H KG W + Q + A+ R+ G E+ P + LW +SG ++ Y Sbjct: 261 GMVFWHPKGWAMWQVIEQ----YMRAVYRD----NGYHEIRCPQIIDRVLWEKSGHWEHY 312 Query: 90 GKEMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M ++++D A+ + P H +V F + ++SYR LP + + R+E Sbjct: 313 KANMFTTESEKHDYAIKPMNCPGHVQV----FNADLRSYRELPLRYGEFGSCHRNEPSGG 368 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+MR R F+ D + F T E + L+++ G + ++ P G Sbjct: 369 LHGLMRVRGFVQDDGHIF-CTEEQIESEVKAFNTLVLKVYKDFGFHDVVVKLALRPEGRV 427 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 S E + D E + + + + D++++ + Y + H Sbjct: 428 GSDE---IWDKSENALRAA-------LRASGMDWEELPGEGAF-------YGPKIEFH-- 468 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAM 322 K R + G I +S+P + A F D M I G++ Sbjct: 469 --------IKDAIGRSWQCGTI---QVDFSMPGRLGAEFVDEDNTRKVPVMLHRAILGSL 517 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ +H G +W +AP ++ ++NI Q + K+ L G V D Sbjct: 518 ERFIGILVENHAGALPLW---LAPVQMVVMNIS---QAQEEYAGKVAQTLRASGFRVQSD 571 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+I + L P Q+I+G K V+ V ++ R MS++ +I Sbjct: 572 LRNEKITYKIREHSLQKLPYQLIIGDKEVAAGLVAVRSRTGEDLGQMSVDALIQ 625 >gi|229096864|ref|ZP_04227833.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|228686474|gb|EEL40383.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29] Length = 639 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|206974097|ref|ZP_03235015.1| threonyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217959885|ref|YP_002338441.1| threonyl-tRNA synthetase [Bacillus cereus AH187] gi|229139078|ref|ZP_04267655.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|206748253|gb|EDZ59642.1| threonyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217066290|gb|ACJ80540.1| threonyl-tRNA synthetase [Bacillus cereus AH187] gi|228644433|gb|EEL00688.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26] Length = 639 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|229196601|ref|ZP_04323345.1| Threonyl-tRNA synthetase [Bacillus cereus m1293] gi|228586957|gb|EEK45031.1| Threonyl-tRNA synthetase [Bacillus cereus m1293] Length = 639 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|78184510|ref|YP_376945.1| threonyl-tRNA synthetase [Synechococcus sp. CC9902] gi|123757112|sp|Q3AYC6|SYT_SYNS9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78168804|gb|ABB25901.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Synechococcus sp. CC9902] Length = 611 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 83/415 (20%), Positives = 153/415 (36%), Gaps = 39/415 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ G + P + LW SG D Y + M Sbjct: 229 GLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYTPHVADISLWKTSGHLDFYAESMFGPM 288 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 289 QVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 347 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 DA+ F L P+ ++ RI + + P S LA Sbjct: 348 TQDDAHVFCL-PDQISDEILRILDLTERILSTFDFNHYEINLSTRPEKSIGSEAVWELAT 406 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 G T+ K + +F I F Y D+ K+ D++ Sbjct: 407 KGLTEALERKGW-NFKIDEGGGAF----------------YGPKIDL---KIEDAIGRMW 446 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHD 334 + S ++ FG Y ADG K + + G++ ++ ++ Sbjct: 447 QCSTIQLDFNLPERFGLDYV--------AADGSKQQPIMIHRAIFGSLERFFGIMTENYA 498 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 G W +AP +I L+ + D V + E++ +L G D G+++G Sbjct: 499 GDFPFW---LAPEQIRLLPVT--DDV-QPYAEQVLNQLKTAGIRATIDQSGDRLGKIIRT 552 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 + + P+ ++G+K + + ++ R G S++ ++ A + +P L Sbjct: 553 GEQMKIPVLAVIGAKEAEQNAISLRSRRDGDLGVTSVDALLKAAQRANAERQPGL 607 >gi|255994452|ref|ZP_05427587.1| threonine--tRNA ligase [Eubacterium saphenum ATCC 49989] gi|255993165|gb|EEU03254.1| threonine--tRNA ligase [Eubacterium saphenum ATCC 49989] Length = 581 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 89/403 (22%), Positives = 153/403 (37%), Gaps = 51/403 (12%) Query: 42 WLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND 101 +LP G + R+E + G E+ P + S +LW SG YD Y KE + +D Sbjct: 211 FLPNGMILRTELENYWRQEHRKRGYDEIKTPLILSEELWHTSGHYDHY-KENMYFTSIDD 269 Query: 102 KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDA 160 P + ++ + SYR+ P ++ R EL G+MR R F DA Sbjct: 270 AEYAIKPMNCPGAMLTYKRKLYSYRDFPIRLAELGQVHRHELHGALHGLMRVRTFTQDDA 329 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFIVLADTG 217 + F +TP+ K ++ +++ G K + R E +G D + Sbjct: 330 HIF-MTPDIVKDEIKRVVSFIDDVYNLFGFKYHIELSTRPEDS-MGTDEEWNHAI----- 382 Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 D ++ I D+ I E A Y D H E DSL Sbjct: 383 --------DSLEAAIKEMGKDY-------VINEGDGAFYGPKLDFHLE---DSL------ 418 Query: 278 SARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSH 333 R + G I F K+ L T+ G+DG+ H + + G++ ++ Sbjct: 419 -GRTWQCGTIQLDFQMPQKFDL----TYVGSDGEKHRPIIIHRVIFGSIERFIGILIEHF 473 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 GK +W +AP ++ L+ + + EK+ L+K G V D E+IG + Sbjct: 474 AGKFPLW---LAPEQVRLLTVT---EKFVPYAEKVSKELAKHGIRVKVDARNEKIGYKLR 527 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 ++G + + ++ G +S+++ I+ Sbjct: 528 QGRNERVSYLAVIGEREAEADTLSVRSSKEGDLGSLSIDKFID 570 >gi|240103108|ref|YP_002959417.1| prolyl-tRNA synthetase [Thermococcus gammatolerans EJ3] gi|239910662|gb|ACS33553.1| Prolyl-tRNA synthetase (proS) [Thermococcus gammatolerans EJ3] Length = 483 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 7/139 (5%) Query: 23 HKLMLRTGMIHQH--SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADL 79 ++L+ G+I + KG+ WLP G K + N+ I E RTG E+ P L + Sbjct: 18 NELLETAGIIDKRYPVKGMNVWLPYGLKIMRNIEKFIHSEMARTGHEEVLFPALIPETEF 77 Query: 80 WVESGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 E+ + E+ + D D +I PT E M +F I+S+ +LPF YQI Sbjct: 78 QKEAEHIKGFEDEVYWVTHAGLDPLDVRLILRPTSETAMYSMFSLWIRSHADLPFKVYQI 137 Query: 136 QLKFRDELRPRFGVMRSRE 154 +R E + ++R RE Sbjct: 138 VNVYRYETKHTRPLIRVRE 156 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 7/162 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + + ++ + ++ G YV ++G+ R++AAVI D G+ Sbjct: 222 GRTLQIGTMHNYKQNFAKAYNIQYETETGDHEYVHQTTFGMSE-RLLAAVIAVHGDDSGM 280 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P ++AP ++ ++ I D +I L K G V D+ + G ++ + Sbjct: 281 VLPPTIAPIQVVIVPIPKKDANVDVFAYAREIAEELGKAGFRVHVDERDIRPGRKYYDWE 340 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLT----GIREDMSLEEV 434 L G PL++ VG + V K + R T + D +EEV Sbjct: 341 LKGVPLRIEVGPRDVEGRKAVLARRDTFEKVTVERDAIVEEV 382 >gi|309805191|ref|ZP_07699243.1| threonine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] gi|308165425|gb|EFO67656.1| threonine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] Length = 461 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 83/408 (20%), Positives = 162/408 (39%), Gaps = 39/408 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 77 GLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 136 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 137 DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 196 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 197 TLNDGHTF-VELDQVQSEFAKILKLIMEVYRDFDITDYYFR---------LSYR-----D 241 Query: 216 TGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M + DD+ E A Y D+ + +L + Sbjct: 242 PKNTDKYFANDEMWERSQKMLKGAMDDLGLEYVEAEGEAAFYGPKLDIQTKT---ALGND 298 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F +++L ++ G DG++H M GI G M A + + Sbjct: 299 ETMSTIQLD----FMLPERFNL----SYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIY 350 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N AH + ++ ++ L K+G D E++G + Sbjct: 351 KGAFPTW---LAPLQVKIIPVNNDAHGEYAQNVKDQ----LMKLGFRAEVDFRNEKLGYK 403 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 A P +++G + + V ++ + +E +L E ++ S Sbjct: 404 IREAQTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELS 451 >gi|238749482|ref|ZP_04610987.1| Threonyl-tRNA synthetase [Yersinia rohdei ATCC 43380] gi|238712137|gb|EEQ04350.1| Threonyl-tRNA synthetase [Yersinia rohdei ATCC 43380] Length = 642 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 83/398 (20%), Positives = 147/398 (36%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 D +E+ D ++ N I + A E Sbjct: 432 ---------------------DLWTRAED-DLAAALTENGIPFDYQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L D L R + G + +SLP +SA++ G + M I G+M Sbjct: 470 LHDCLD-------RAWQCGTV---QLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSME 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++NI D +++ +L G D Sbjct: 520 RFIGILTEEYAG---FFPTWLAPVQVVVMNITDSQS---DYVQQVTKKLQDAGIRAKADL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V K+ ++ R Sbjct: 574 RNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTR 611 >gi|116514446|ref|YP_813352.1| threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093761|gb|ABJ58914.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126146|gb|ADY85476.1| Threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 643 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 86/413 (20%), Positives = 163/413 (39%), Gaps = 39/413 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 259 GLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D + M+ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + + + ++H + R LS+ D Sbjct: 379 TLNDGHTF-VALDQVQEEFARTLQIIMDVYHDFDINDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M S D + L+ + E A Y D+ + +L + Sbjct: 424 PKNTDKYFANDEMWERSQSMLKAAMDDMGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L ++ GADG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFEL----SYIGADGEEHRPVMIHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N+ AH D +K+ L G D E++G + Sbjct: 533 KGAFPTW---LAPVQAEIIPVNLDAH----SDYAKKVRDELVAKGFRAEIDFRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + P +++G ++ V ++ T + SL E ++ S +N Sbjct: 586 IRESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMDKLSKDVAN 638 >gi|89100420|ref|ZP_01173283.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89084849|gb|EAR63987.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 494 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 72/146 (49%), Gaps = 2/146 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ + +G+ +V S+G+ RV+ A+I D +G+ Sbjct: 241 GKALQTGTSHHLGDGFAKAFGIQYSDREGELQHVHQTSWGL-TTRVIGAMIMVHGDNRGL 299 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 I P +AP ++ ++ + H + D C ++ +L K V D ++ G +F ++ Sbjct: 300 IIPPRIAPTQLMIVPVAQHKEGVLDFCYELKEKLGK-SFRVGIDSSDKKPGWKFNEYEMK 358 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G PL++ G K + +++V + R TG Sbjct: 359 GIPLRLEAGPKDIENNQVVLVRRDTG 384 >gi|103486185|ref|YP_615746.1| threonyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] gi|123380057|sp|Q1GVA9|SYT_SPHAL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|98976262|gb|ABF52413.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] Length = 667 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 96/430 (22%), Positives = 151/430 (35%), Gaps = 68/430 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G W P G + A +R + G E+ P + A W +SG + Y + Sbjct: 265 LQQEAHGSVFWHPNGFVVWRELEAYMRRAIDAAGYREVKTPQVMDARQWEQSGHWGKYRE 324 Query: 92 EMLRLADR-----------NDKA--MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 M + D +D A M P + IFR +KSYR+LP Y+ Sbjct: 325 NMFVIPDEVPNTEDEGPIVSDDAEWMALKPMNCPAHVLIFRQGMKSYRDLPLRLYENGCC 384 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 R+E G+MR R+F DA+ F V +R F L + Sbjct: 385 HRNEPHGALHGLMRVRQFTQDDAHIF---------CREDQIVEEVRNFCALADR------ 429 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 I D + + + F S D SE+ + +I EQ+ Sbjct: 430 ----IYKDFGFTYAIKLALRPEKRFGSDAMWD---KSEDELRNAVIEAGLATEQYG---- 478 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIE------VGHIFYFGTKYS---LP--MSATFKGAD 306 ++ LP A +E +G + GT S LP + A++ G D Sbjct: 479 ----------WEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPDRLDASYIGED 528 Query: 307 GKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 G+ H M I G+ ++ G+ W +AP + + I + D Sbjct: 529 GERHRPVMLHRAIFGSYERFIGILIEHFVGRFPTW---LAPVQAVVATIVSD---ADDYA 582 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + ARL G D E+I + L P ++VG + + V I+ Sbjct: 583 KAATARLVAAGIRTESDLRNEKINYKVREHSLAKVPHLLVVGKREAEEGTVAIRTLGQDG 642 Query: 426 REDMSLEEVI 435 + M L E I Sbjct: 643 QRIMPLAEAI 652 >gi|320451068|ref|YP_004203164.1| prolyl-tRNA synthetase [Thermus scotoductus SA-01] gi|320151237|gb|ADW22615.1| prolyl-tRNA synthetase [Thermus scotoductus SA-01] Length = 477 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 79/158 (50%), Gaps = 7/158 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G ++ F+ D + YV S+G+ + R + A+I + D +G+ Sbjct: 221 GKALQSGTSHYLGENFARAFDIKFQDKDLQVKYVHTTSWGL-SWRFIGAIIMTHGDDQGL 279 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAV 394 I P +AP ++ ++ I ++ ++V +A + RL + G V DD + G +F Sbjct: 280 ILPPRLAPIQVVIVPIYREESREKVL-EAAFDLKQRLLQAGLRVHLDDRDQHTPGYKFHE 338 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +L G P ++ +G K + + + RL G +E ++LE Sbjct: 339 WELKGVPFRIELGPKDLEAGEAVLASRLGG-KERLTLE 375 Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E V+ ++ IKSYR+LP Q R ELR R +R+ EFL ++ ++ T Sbjct: 110 PTSETVIGYMWSKWIKSYRDLPQLLNQWGNVVRWELRTR-PFLRTSEFLWQEGHTAHATR 168 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 E ++ +M Y ++ G +IP+ Sbjct: 169 EEAEEEVRRMLSIYAKLAREYG--AIPV 194 >gi|113970292|ref|YP_734085.1| threonyl-tRNA synthetase [Shewanella sp. MR-4] gi|117920487|ref|YP_869679.1| threonyl-tRNA synthetase [Shewanella sp. ANA-3] gi|123029660|sp|Q0HIT9|SYT_SHESM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225501|sp|A0KWV4|SYT_SHESA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|113884976|gb|ABI39028.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella sp. MR-4] gi|117612819|gb|ABK48273.1| threonyl-tRNA synthetase [Shewanella sp. ANA-3] Length = 642 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 80/397 (20%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR + N+ E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + + P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAV-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + + G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQVQAEVSSCIQMVYDTYSTFGFENIVVKLSTRPEKRIGDDAM 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ Q + + +P E + I L Sbjct: 434 WD---RAEEALKQALRANNIEFTILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G+ +P +AP ++ ++NI D E++ + G +D Sbjct: 521 FLGILIEEYAGR---FPTWLAPMQVVVMNITDKQA---DYVEEVVKFFKEQGIRASFDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|222095974|ref|YP_002530031.1| threonyl-tRNA synthetase [Bacillus cereus Q1] gi|221240032|gb|ACM12742.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus Q1] Length = 639 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|196043419|ref|ZP_03110657.1| threonyl-tRNA synthetase [Bacillus cereus 03BB108] gi|196025728|gb|EDX64397.1| threonyl-tRNA synthetase [Bacillus cereus 03BB108] Length = 639 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|324326401|gb|ADY21661.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 639 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|314936214|ref|ZP_07843561.1| threonine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] gi|313654833|gb|EFS18578.1| threonine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] Length = 645 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 82/405 (20%), Positives = 173/405 (42%), Gaps = 41/405 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + +L+ SG +D Y +M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVELYKTSGHWDHYRDDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ + M+ P + ++ + SYR LP ++ R E G+ R R Sbjct: 322 KLDETEEMVLRPMNCPHHMMVYNNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + D++ F + P+ K + ++ ++ G + R + P + + + Sbjct: 382 TLNDSHIF-VRPDQIKDEFKRVVHMIQDVYEDFGFEDYTFRLSYRDPEDKEKYMDDDDMW 440 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + E+ + + D M P + +I E A Y DV ++ ++ + Sbjct: 441 NKAESMLKEAVDEMGLPY------------VEAIGE--AAFYGPKLDV---QVKTAMGKE 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L ++ G+DG++H + G+ + R VA + E + Sbjct: 484 ETLSTAQLD----FLLPERFDL----SYIGSDGENHRPVVIHRGVVSTMERFVAFLTEET 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ +I N+ H R+ +++ ++ G V DD E++G Sbjct: 536 ---KG-AFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQ----GVRVEIDDRNEKMGY 587 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 588 KIREAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETIERDEFI 632 >gi|229115852|ref|ZP_04245250.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228667595|gb|EEL23039.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3] Length = 640 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|332161611|ref|YP_004298188.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665841|gb|ADZ42485.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 642 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 83/398 (20%), Positives = 147/398 (36%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 D +E+ D ++ N I + A E Sbjct: 432 ---------------------DLWTRAED-DLAAALTENGIPFDYQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L D L R + G + +SLP +SA++ G + M I G+M Sbjct: 470 LHDCLD-------RAWQCGTV---QLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSME 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++NI D +++ +L G D Sbjct: 520 RFIGILTEEYAG---FFPTWLAPVQVVVMNITDSQS---DYVQQVTKKLQDAGIRAKADL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V K+ ++ R Sbjct: 574 RNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTR 611 >gi|229155963|ref|ZP_04284064.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228627570|gb|EEK84296.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342] Length = 639 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|161833740|ref|YP_001597936.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS] gi|152206230|gb|ABS30540.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS] Length = 489 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 9/162 (5%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++ + G +S + G YV S+GI + R++ A+I + D G+ Sbjct: 231 GKSLQIATSHFLGQNFSKAFDVRYTTEKGNKEYVWATSWGI-STRLIGAIIMTHSDDNGL 289 Query: 339 IWPDSVAPFKISLINI-KAHDQVCRDACEKIY----ARLSKVGCDVFWDDMGEQI-GSQF 392 I P +AP +I +I + K +Q+ + EK+ L K G + +D G +F Sbjct: 290 ILPPKIAPLQIVIIPVYKTQEQL--NLIEKLVLPLKESLEKRGISIKYDKRTYYTPGWKF 347 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 ++ G P+++ +G K + VE+ R T ++D+ + ++ Sbjct: 348 NEYEIKGIPIRITIGKKDIDRGTVEVVRRDTLEKKDIIINKL 389 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 4/70 (5%) Query: 96 LADRNDK---AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 + D+N K +I PT E ++ + ++ I SYR+LP F Q R E R RF +R+ Sbjct: 105 IVDKNSKLEDELIVRPTSETIIWNSYKRWINSYRDLPIRFNQWANIIRWERRTRF-FLRT 163 Query: 153 REFLMKDAYS 162 EFL ++ ++ Sbjct: 164 SEFLWQEGHT 173 >gi|54023348|ref|YP_117590.1| putative threonyl-tRNA synthetase [Nocardia farcinica IFM 10152] gi|54014856|dbj|BAD56226.1| putative threonyl-tRNA synthetase [Nocardia farcinica IFM 10152] Length = 419 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 85/394 (21%), Positives = 148/394 (37%), Gaps = 48/394 (12%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 G+ WLP G + IR ++R G + P L +L+ SG + Y ++M Sbjct: 38 GSGLPYWLPSGGALRHALEEYIRTAEHRAGYRHVHSPVLGKRELYEISGHWAHYREDMYP 97 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM-RSRE 154 D + ++ P+ I+RS SYR LP ++ +R EL G + R R Sbjct: 98 PMDVGGEQVVLRPSLCPHHALIYRSRSHSYRELPLRIAELGAMYRAELSGVLGGLSRVRA 157 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE-SGPIGGDLSHEFIVL 213 + DA+ F T + + R LG+ R GP G + + + Sbjct: 158 IHLNDAHIF-CTEDQVGAEVHAALAMIARAHAALGIAPHRFRLSLPGPGGKYVPNPAMWE 216 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDF----DDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 TG +D+ + F D+ L+S ++T D H + FD Sbjct: 217 RATGVLVEALRAAGIDYEPADDEAAFYGPKIDVQFLDSAGREFTL-STVQVDFHQPEQFD 275 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAA 327 + GADG H V + IG++ R VA Sbjct: 276 ------------------------------LCYIGADGAKHRPVMVHRSIIGSVERAVAH 305 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++E H G +W +AP ++ ++ + + ++ R + V ++ D G Sbjct: 306 LVE-VHGGAFPVW---LAPTQVVVLPLAGEQHAAAEDVVRVL-RAADVRAELAGHDQG-S 359 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +G++ + P QV+VG K V+ + ++ R Sbjct: 360 LGARIRAGRQV--PYQVVVGPKEVAAGTLAVRLR 391 >gi|71418959|ref|XP_811024.1| threonyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70875641|gb|EAN89173.1| threonyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 816 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 8/136 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G WLP G + + + R++ R G E+ P + S+ LW+ SG +D Y Sbjct: 316 FHEVSPGSAFWLPHGARIYNALVEFQRKQYRRRGFEEVVSPNMFSSKLWMVSGHWDKYAD 375 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M R+ ++ D M + P H ++ SY+ LP + + R+EL Sbjct: 376 NMFRIVVEKEDHGMKPMNCPGH----CIMYAMQQHSYKELPIRYADFGVLHRNELSGALT 431 Query: 148 GVMRSREFLMKDAYSF 163 G+ R R F DA+ F Sbjct: 432 GLTRVRRFQQDDAHIF 447 >gi|261328034|emb|CBH11011.1| threonyl-tRNA synthetase, putative [Trypanosoma brucei gambiense DAL972] Length = 799 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 4/134 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G WLP G + + + R++ R G E+ P + S+ LW+ SG +D Y Sbjct: 304 FHEASPGNAFWLPHGARIYNTLIEFQRKQYRRRGFEEVVSPNMFSSRLWMVSGHWDKYAD 363 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + ++ D M P + +F SYR LP + + R+EL G+ Sbjct: 364 NMFLINVEKEDHGM--KPMNCPGHCLMFAMQPHSYRELPIRYADFGVLHRNELSGALTGL 421 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 422 TRVRRFQQDDAHIF 435 >gi|225864350|ref|YP_002749728.1| threonyl-tRNA synthetase [Bacillus cereus 03BB102] gi|225785860|gb|ACO26077.1| threonine--tRNA ligase [Bacillus cereus 03BB102] Length = 639 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|297191715|ref|ZP_06909113.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|197721430|gb|EDY65338.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 408 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 89/396 (22%), Positives = 154/396 (38%), Gaps = 56/396 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + IR + R G + P L +L+ SG + Y +M Sbjct: 23 GLPYWLPDGATVRHTLEEYIRSAERRAGYRHVYSPVLGKRELYEISGHWAHYSDDMFPPM 82 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + ++ P+ I+RS SYR LP ++ +R EL G+ R R Sbjct: 83 DLGGEQVVLRPSLCPHHAVIYRSRSHSYRELPLRMAELGGMYRSELSGVLGGLTRVRAIQ 142 Query: 157 MKDAYSF---DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE-SGPIGGDLSHEFIV 212 + DA+ F D E ++ + + R + LG+ R GP G +++ Sbjct: 143 LNDAHIFCTLDQVAEEARAALEMIR----RAYEALGITPARYRLSLPGPGG-----KYVA 193 Query: 213 LADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + + D +D +P E + + A Y DV ++ D Sbjct: 194 APEKWKRSTALLTDVLDRSGLPYEAAEGE------------AAFYGPKIDV---QVTDGA 238 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVI 329 +S ++ F+ ++ L + GADG H V + IG++ R VA +I Sbjct: 239 GRESTLSTVQVD----FHQPEQFDL----HYIGADGARHRPVMVHRSIIGSVERAVAHLI 290 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIK----AHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 E H G W +AP +++++ I H C + R G + Sbjct: 291 E-QHGGAFPAW---LAPTQVAILPISDAELPHAAALARRCAGLGLRAEIAGPER------ 340 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +G++ A L+ P Q ++G+K +D V ++ R Sbjct: 341 GTLGARVREARLV--PYQAVIGAKEAADDHVALRLR 374 >gi|148381286|ref|YP_001255827.1| prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|153932635|ref|YP_001385663.1| prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|153936422|ref|YP_001389069.1| prolyl-tRNA synthetase [Clostridium botulinum A str. Hall] gi|171769224|sp|A7FYU0|SYP_CLOB1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|172047866|sp|A5I768|SYP_CLOBH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148290770|emb|CAL84901.1| prolyl-tRNA synthetase 1 [Clostridium botulinum A str. ATCC 3502] gi|152928679|gb|ABS34179.1| prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|152932336|gb|ABS37835.1| proline--tRNA ligase [Clostridium botulinum A str. Hall] Length = 478 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/358 (19%), Positives = 142/358 (39%), Gaps = 79/358 (22%) Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--L 137 WV G D LA+R + PT E + + + ++SY++LP + Q + Sbjct: 97 WVTHGGDDE-------LAER----LCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVV 145 Query: 138 KFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK-HSYNKMFVSYLRIFHRLGLKSIPMR 196 ++ RP +R+ EFL ++ ++ T E ++ HS + L ++ RL + M Sbjct: 146 RWEKTTRP---FLRTTEFLWQEGHTIHETKEEAESHS-----LKILNMYSRLCEDMLAMP 197 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 +V+ + + F D D ++ S++ A Sbjct: 198 --------------VVMGKKTDKEKFAGAD--------------DTYTIESLMHDGKALQ 229 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 A TS Y G +S + F +GK Y + Sbjct: 230 AGTS---------------------------HYLGQNFSKAFAIQFSDRNGKLDYPHYTT 262 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 + + R++ A+I D G+ P +AP + +I + H + + +++ +L+KV Sbjct: 263 WAV-TTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAKELKEKLAKV- 320 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V DD + G +++ ++ G PL++ +G K + ++ + R + +SL+E+ Sbjct: 321 VRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEI 378 >gi|317013544|gb|ADU80980.1| threonyl-tRNA synthetase [Helicobacter pylori Gambia94/24] Length = 612 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ E G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPIWLPKGARLRKRIEDLLSEALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|161760548|ref|NP_907033.2| threonyl-tRNA synthetase [Wolinella succinogenes DSM 1740] Length = 602 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + A++ E R + P + +DLW SG Y +Y KE + Sbjct: 228 GLPIWLPAGARLRRRLEAMLTEAHIRRNYEPVRGPEILKSDLWKISGHYQNY-KENMYFT 286 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + ++ S ++SYR LP FY+ + R E G++R REF Sbjct: 287 KIDEVEYGIKPMNCVGHIKVYGSGVRSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFT 346 Query: 157 MKDAYSF 163 DA+ F Sbjct: 347 QDDAHIF 353 >gi|118477787|ref|YP_894938.1| threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|229184596|ref|ZP_04311798.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|118417012|gb|ABK85431.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|228598913|gb|EEK56531.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1] Length = 639 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|74317025|ref|YP_314765.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] gi|123731846|sp|Q3SK34|SYT_THIDA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|74056520|gb|AAZ96960.1| threonyl-tRNA synthetase, class IIa [Thiobacillus denitrificans ATCC 25259] Length = 637 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 89/433 (20%), Positives = 157/433 (36%), Gaps = 59/433 (13%) Query: 17 DAEIASHK-LMLRTGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ L + ++H + G+ W P G + +RE+ G E+ P Sbjct: 239 EAEKRDHRRLAKQLDLLHMQDEAPGMVFWHPKGWIVWQQIEQYMREKFVEYGYQEVRTPA 298 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + +W +SG +++Y M A N + P + IF S + SYR+LP Sbjct: 299 VMDRSMWEKSGHWENYRDNMFTTASENRDYAV-KPMNCPGHVQIFNSGLHSYRDLPLRLA 357 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F DA+ F + E + V +++ G Sbjct: 358 EFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCME-EQVEQEVADFIVMLQKVYADFGFND 416 Query: 193 IPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI-PSENTDFDDIISLNSI 248 + ++ + P +G D S + K+ + F + P E + I Sbjct: 417 VLVKLSTRPDKRVGSDESWD----KAESALAAALEKNGLSFDLQPGEGAFYGPKIEFT-- 470 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFK 303 L D+L G ++ GT ++LP + A F Sbjct: 471 ------------------LKDTL-------------GRLWQCGTIQLDFNLPVRLGAEFV 499 Query: 304 GADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 D M I G+M ++ H G +W +AP ++ ++NI Sbjct: 500 AEDNTRKIPVMLHRAILGSMERFIGILIEHHAGNFPLW---LAPVQVMVMNISERQAA-- 554 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E + L + G D +I + L P Q++VG K + V ++ R Sbjct: 555 -YAEAVAEALRRAGIRAALDLSNNKINYKIREHSLQKLPYQLVVGDKEMEARVVAVRARG 613 Query: 423 TGIREDMSLEEVI 435 + L+++I Sbjct: 614 NQDMGQLGLDDLI 626 >gi|71655606|ref|XP_816364.1| threonyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70881486|gb|EAN94513.1| threonyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 817 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 8/136 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G WLP G + + + R++ R G E+ P + S+ LW+ SG +D Y Sbjct: 317 FHEVSPGSAFWLPHGARIYNALVEFQRKQYRRRGFEEVVSPNMFSSKLWMVSGHWDKYAD 376 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M R+ ++ D M + P H ++ SY+ LP + + R+EL Sbjct: 377 NMFRIVVEKEDHGMKPMNCPGH----CIMYAMQQHSYKELPIRYADFGVLHRNELSGALT 432 Query: 148 GVMRSREFLMKDAYSF 163 G+ R R F DA+ F Sbjct: 433 GLTRVRRFQQDDAHIF 448 >gi|262341223|ref|YP_003284078.1| threonine--tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272560|gb|ACY40468.1| threonine--tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 424 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 4/162 (2%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-- 95 G+ WLP G +N+ + + Q ++G + P + L+++SG + YGK+ + Sbjct: 37 GLPLWLPRGTILRNNLEEFLTDIQKKSGYEMVVTPHIGHKKLYIQSGHWRKYGKDNFKPI 96 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 R ++ + P + +++RS SYR+LP F + +R E G+ R R Sbjct: 97 QTPREEEEFLLKPMNCPHHCEVYRSQEWSYRDLPKRFAEFGTVYRYEQSGELHGLTRVRS 156 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 F DA+ F T + + K+ +F LG +R Sbjct: 157 FTQDDAHIF-CTYDQVLEEFKKVINLVFYVFRCLGFSEYTVR 197 >gi|72388976|ref|XP_844783.1| threonyl-tRNA synthetase [Trypanosoma brucei TREU927] gi|62176044|gb|AAX70165.1| threonyl-tRNA synthetase, putative [Trypanosoma brucei] gi|70801317|gb|AAZ11224.1| threonyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 799 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 4/134 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G WLP G + + + R++ R G E+ P + S+ LW+ SG +D Y Sbjct: 304 FHEASPGNAFWLPHGARIYNTLIEFQRKQYRRRGFEEVVSPNMFSSRLWMVSGHWDKYAD 363 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + ++ D M P + +F SYR LP + + R+EL G+ Sbjct: 364 NMFLINVEKEDHGM--KPMNCPGHCLMFAMQPHSYRELPIRYADFGVLHRNELSGALTGL 421 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 422 TRVRRFQQDDAHIF 435 >gi|325276812|ref|ZP_08142513.1| threonyl-tRNA synthetase [Pseudomonas sp. TJI-51] gi|324098050|gb|EGB96195.1| threonyl-tRNA synthetase [Pseudomonas sp. TJI-51] Length = 640 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 67/171 (39%), Gaps = 3/171 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R Q G E+ P + LW SG + +Y + Sbjct: 255 LQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDRILWERSGHWSNYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTSSESRDYAV-KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 R R F+ DA+ F T E K L ++ G I M+ + P Sbjct: 374 RVRGFVQDDAHIF-CTEEQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTRP 423 >gi|260770313|ref|ZP_05879246.1| threonyl-tRNA synthetase [Vibrio furnissii CIP 102972] gi|260615651|gb|EEX40837.1| threonyl-tRNA synthetase [Vibrio furnissii CIP 102972] Length = 642 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR + N G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFIRHKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENRDYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 376 RVRGFTQDDAHIF 388 >gi|253573561|ref|ZP_04850904.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251847089|gb|EES75094.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 483 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 82/164 (50%), Gaps = 10/164 (6%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y GT ++ + + YV S+G+ + R++ ++I D +G+ Sbjct: 226 GRAVQAGTSHYLGTNFAKAFDIQYLNRENVREYVHTTSWGV-STRLIGSLIMVHGDDRGL 284 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAV 394 P VAP ++ +I I K + V A ++++A L K G V DD + + G +F Sbjct: 285 ALPPKVAPKQVMIIPIGPPKTWEAVVGRA-DELFAELKKAGIRVGIDDRADFRPGWKFNE 343 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEV 434 ++ G P+++ +G + + + + R++G +++D +EEV Sbjct: 344 YEMRGVPVRLEIGPRDMENGVCVLVSRISGEKKVVQQDRLVEEV 387 >gi|238765296|ref|ZP_04626223.1| Threonyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] gi|238696469|gb|EEP89259.1| Threonyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] Length = 642 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 83/398 (20%), Positives = 147/398 (36%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 D +E+ D ++ N I + A E Sbjct: 432 ---------------------DLWTRAED-DLAAALTENGIPFDYQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L D L R + G + +SLP +SA++ G + M I G+M Sbjct: 470 LHDCLD-------RAWQCGTV---QLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSME 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++NI D +++ +L G D Sbjct: 520 RFIGILTEEYAG---FFPTWLAPVQVVVMNITDSQS---DYVQQVTKKLQDAGIRAKADL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V K+ ++ R Sbjct: 574 RNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTR 611 >gi|228985474|ref|ZP_04145631.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774239|gb|EEM22648.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 639 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|228475159|ref|ZP_04059885.1| threonine--tRNA ligase [Staphylococcus hominis SK119] gi|228270770|gb|EEK12172.1| threonine--tRNA ligase [Staphylococcus hominis SK119] Length = 645 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 82/405 (20%), Positives = 173/405 (42%), Gaps = 41/405 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P L + +L+ SG +D Y +M Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVELYKTSGHWDHYRDDMFPPM 321 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ + M+ P + ++ + SYR LP ++ R E G+ R R Sbjct: 322 KLDETEEMVLRPMNCPHHMMVYNNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLA 214 + D++ F + P+ K + ++ ++ G + R + P + + + Sbjct: 382 TLNDSHIF-VRPDQIKDEFKRVVHMIQDVYEDFGFEDYTFRLSYRDPEDKEKYMDDDDMW 440 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + E+ + + D M P + +I E A Y DV ++ ++ + Sbjct: 441 NKAESMLKEAVDEMGLPY------------VEAIGE--AAFYGPKLDV---QVKTAMGKE 483 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESS 332 + +S ++ F ++ L ++ G+DG++H + G+ + R VA + E + Sbjct: 484 ETLSTAQLD----FLLPERFDL----SYIGSDGENHRPVVIHRGVVSTMERFVAFLTEET 535 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 KG +P +AP ++ +I N+ H R+ +++ ++ G V DD E++G Sbjct: 536 ---KG-AFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQ----GVRVEIDDRNEKMGY 587 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 588 KIREAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETIERDEFI 632 >gi|85375301|ref|YP_459363.1| threonyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] gi|123293655|sp|Q2N6X5|SYT_ERYLH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|84788384|gb|ABC64566.1| threonyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] Length = 672 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 96/437 (21%), Positives = 163/437 (37%), Gaps = 82/437 (18%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G K + A +R + + G E+ P + A W +SG + Y + Sbjct: 270 LQEEAHGSVFWHPQGYKIWRELEAYMRRKMDGAGYREIKTPQVMDARQWEQSGHWGKYRE 329 Query: 92 EMLRLAD-------------RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 M + D ++ M P + +F+ I SYR+LP ++ Sbjct: 330 NMFVIPDEIPNTEDEGELVSKDADWMALKPMNCPAHVLVFKQGITSYRDLPIRLGEMGCC 389 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 R+E G+MR R+F DA+ F V +R F +L Sbjct: 390 HRNEPHGALHGLMRVRQFTQDDAHIF---------CTEDQVVEEVRAFCKL--------- 431 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYA 257 + + D ++ V Q F S++ D+D EQ Sbjct: 432 -ADEVYRDFGFDYDVKLALRPEQRFGSEE-----------DWDK-------AEQELRDAV 472 Query: 258 ATSDVHNEKL-FDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGA 305 A + + N+ ++ LP A +E +G + GT LP + AT+ G Sbjct: 473 AEAGMANDDYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLPERLDATYVGE 532 Query: 306 DGKDHYVQM------GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-D 358 DG H M GSY R + +IE G+ +W +AP + + I + D Sbjct: 533 DGGKHRPVMLHRAIFGSY----ERFIGILIE-HFAGRLPVW---LAPTQAVVATIVSDAD 584 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 ++A A+L G V D E+I + L P ++VG + + V + Sbjct: 585 GYAKEAV----AKLEAAGIRVDGDLRNEKINFKVREHSLAKVPHLLVVGKREAEEGTVAV 640 Query: 419 KHRLTGIREDMSLEEVI 435 + ++ MSL++ I Sbjct: 641 RTLGEKEQQVMSLDDAI 657 >gi|332967802|gb|EGK06905.1| threonine--tRNA ligase [Desmospora sp. 8437] Length = 279 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP G + + + R+ Q G E+ P + + LW +SG +D Y Sbjct: 1 MFSEEAPGMPFYLPKGMTIRNELESFSRKLQKEAGYQEVRTPLMMNQRLWEQSGHWDHY- 59 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +E + ++ A P + +F+ I+SYR+LP + R EL G+ Sbjct: 60 RENMYFTHVDETAFSIKPMNCPGHMLVFKHGIRSYRDLPLRLAEFGQVHRHELSGALHGM 119 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 120 FRVRTFTQDDAHIF 133 >gi|295090762|emb|CBK76869.1| prolyl-tRNA synthetase, family I [Clostridium cf. saccharolyticum K10] Length = 477 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 3/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ F D K YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFGIQFSDKDNKLKYVHQTSWGM-TTRLIGAIIMVHGDDSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ ++ I+ + D ++ LS G V DD + G +F+ +++ Sbjct: 284 VLPPRIAPTQVVIVPIRQQAEGVLDKAYELKDILS--GFSVKVDDSDKSPGWKFSESEMR 341 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P++V +G K + ++ + R T + +SL+E+ Sbjct: 342 GIPVRVEIGPKDLEQNQAVLVRRDTHEKITVSLDEI 377 >gi|322819645|gb|EFZ26679.1| threonyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 816 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 8/136 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G WLP G + + + R++ R G E+ P + S+ LW+ SG +D Y Sbjct: 316 FHEVSPGSAFWLPHGARIYNALVEFQRKQYRRRGFEEVVSPNMFSSKLWMVSGHWDKYAD 375 Query: 92 EMLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M R+ ++ D M + P H ++ SY+ LP + + R+EL Sbjct: 376 NMFRIVVEKEDHGMKPMNCPGH----CIMYAMQQHSYKELPIRYADFGVLHRNELSGALT 431 Query: 148 GVMRSREFLMKDAYSF 163 G+ R R F DA+ F Sbjct: 432 GLTRVRRFQQDDAHIF 447 >gi|229102972|ref|ZP_04233661.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228680387|gb|EEL34575.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28] Length = 640 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|168178993|ref|ZP_02613657.1| prolyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|226950778|ref|YP_002805869.1| prolyl-tRNA synthetase [Clostridium botulinum A2 str. Kyoto] gi|259511586|sp|C1FM10|SYP_CLOBJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|182670280|gb|EDT82256.1| prolyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|226841931|gb|ACO84597.1| proline--tRNA ligase [Clostridium botulinum A2 str. Kyoto] Length = 478 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/358 (19%), Positives = 142/358 (39%), Gaps = 79/358 (22%) Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--L 137 WV G D LA+R + PT E + + + ++SY++LP + Q + Sbjct: 97 WVTHGGDDE-------LAER----LCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVV 145 Query: 138 KFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK-HSYNKMFVSYLRIFHRLGLKSIPMR 196 ++ RP +R+ EFL ++ ++ T E ++ HS + L ++ RL + M Sbjct: 146 RWEKTTRP---FLRTTEFLWQEGHTIHETKEEAESHS-----LKILNMYSRLCEDMLAMP 197 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 +V+ + + F D D ++ S++ A Sbjct: 198 --------------VVMGKKTDKEKFAGAD--------------DTYTIESLMHDGKALQ 229 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 A TS Y G +S + F +GK Y + Sbjct: 230 AGTS---------------------------HYLGQNFSKAFAIQFSDRNGKLDYPHYTT 262 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 + + R++ A+I D G+ P +AP + +I + H + + +++ +L+KV Sbjct: 263 WAV-TTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAKELKEKLAKV- 320 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V DD + G +++ ++ G PL++ +G K + ++ + R + +SL+E+ Sbjct: 321 VRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEI 378 >gi|261867949|ref|YP_003255871.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413281|gb|ACX82652.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 643 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 88/421 (20%), Positives = 158/421 (37%), Gaps = 50/421 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +YG Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + P+ + I+ G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIFCM-PDQVESEVTSCIKMVYDIYSTFGFENIKVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 + D E D + NS+ + A E Sbjct: 432 ----EMWDKAE------------------ADLAKALEHNSLSYEIQEGEGAFYGPKLEFA 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L DSL R + G I + LP ++A++ G D + M I G++ Sbjct: 470 LTDSLD-------REWQCGTI---QLDFFLPERLNASYVGEDNERKVPVMIHRAILGSIE 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 +I + G +P +AP ++ ++NI + +K+ +LS G V D Sbjct: 520 RFIGIITEEYAG---FFPAWLAPTQVVVMNITDSQS---EYVQKVAKQLSDAGLRVKTDL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E++G + L P ++ G K + KV ++ R ++EE ++ + Sbjct: 574 RNEKVGFKIREHTLRRVPYMLVCGDKEIEAGKVAVRTRKGQDLGTFTVEEFLDILKKQVR 633 Query: 444 N 444 N Sbjct: 634 N 634 >gi|229091361|ref|ZP_04222576.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228691990|gb|EEL45732.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42] Length = 639 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|196033851|ref|ZP_03101262.1| threonyl-tRNA synthetase [Bacillus cereus W] gi|228945992|ref|ZP_04108333.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195993531|gb|EDX57488.1| threonyl-tRNA synthetase [Bacillus cereus W] gi|228813685|gb|EEM59965.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 639 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|19703946|ref|NP_603508.1| threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|22654111|sp|Q8RFS6|SYT_FUSNN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|19714122|gb|AAL94807.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 620 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 84/428 (19%), Positives = 171/428 (39%), Gaps = 56/428 (13%) Query: 3 RSKYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 R K+ L +++E AE H+ + L + ++ G +LP G + + + R Sbjct: 209 RLKHHLKLMEE----AEKRDHRKLGKELELFFLSEYGPGFPFFLPKGMIVRNVLIDLWRR 264 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E + G ++ P + + +LW SG + +Y +E + ++ ++ P + F+ Sbjct: 265 EHEKAGYQQLETPIMLNKELWEISGHWFNY-RENMYTSEIDELEFAIKPMNCPGGVLAFK 323 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + SY++LP ++ R E G+MR R F D++ F +TP+ + + Sbjct: 324 HQLHSYKDLPARLAELGRVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEIIGVV 382 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + + +L E+ + T + S++ D + Sbjct: 383 NLIDKFYSKL-----------------FGFEYEIELSTKPEKAIGSQEIWDMAEAALAGA 425 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYS 295 D + I A Y D K+ D+ +G ++ GT ++ Sbjct: 426 LDKLGRKYKINPGDGAFYGPKLDF---KIKDA-------------IGRMWQCGTIQLDFN 469 Query: 296 LP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 LP T+ G DG+ H V + G++ ++ + G +W +AP ++ ++ Sbjct: 470 LPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMW---LAPVQVKVL 526 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFV 411 + + C ++I +L ++G DD E IG + A+ P+Q+I+G V Sbjct: 527 TL---NDECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGKYKIPMQLIIGKNEV 583 Query: 412 SDSKVEIK 419 + +V I+ Sbjct: 584 ENKEVNIR 591 >gi|315181382|gb|ADT88295.1| threonyl-tRNA synthetase [Vibrio furnissii NCTC 11218] Length = 642 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR + N G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFIRHKLNEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENRDYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 376 RVRGFTQDDAHIF 388 >gi|217979642|ref|YP_002363789.1| threonyl-tRNA synthetase [Methylocella silvestris BL2] gi|217505018|gb|ACK52427.1| threonyl-tRNA synthetase [Methylocella silvestris BL2] Length = 648 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 1/132 (0%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + G W P G + A +R G +E++ P + LW SG + ++ + Sbjct: 257 QEEGPGAIFWHPKGWTLFQTLIAYMRRRMEADGYLEVNTPQVLDRALWETSGHWQTFREH 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +++ P + IF++ +KSYR+LP + + R E GVMR Sbjct: 317 MFLTKTEDERIFALKPMNCPGHVQIFKNGLKSYRDLPLKIGEFGVVHRYEPSGALHGVMR 376 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 377 VRAFTQDDAHIF 388 >gi|315924324|ref|ZP_07920547.1| threonine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622395|gb|EFV02353.1| threonine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] Length = 644 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 1/129 (0%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ WLP G K + + R+E + G E+S P + LW +SG +D Y M Sbjct: 258 APGMPYWLPKGWKLFNTLLEFWRDEHEKRGYQEISSPQINYNKLWRQSGHWDHYKDNMFV 317 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + ++ P + +++ +SYR+LP + R E + G++R + Sbjct: 318 IPVSENEIYGVKPMNCPNAIVVYKRKTRSYRDLPLRLSDCDVLHRKEKSGQLHGLLRVQM 377 Query: 155 FLMKDAYSF 163 F D+++F Sbjct: 378 FRQDDSHNF 386 >gi|166365900|ref|YP_001658173.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843] gi|166088273|dbj|BAG02981.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843] Length = 618 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 85/416 (20%), Positives = 158/416 (37%), Gaps = 67/416 (16%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+ G + P L + DLW SG +D Y M Sbjct: 241 GLVFWHPRGATMRYLIEDYWRQAHLEAGYQFLYTPHLANLDLWKTSGHWDFYRDNMFEAI 300 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++ P + +++ + SYR P + ++ +R E G+MR R F Sbjct: 301 ELEQQSYQIKPMNCPFHVLTYQNDLHSYREFPLRWAELGTVYRYERSGVLHGLMRVRGFT 360 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F L PE + AE I G L+ +L+D Sbjct: 361 QDDAHIFCL-PE-------------------------QIAAE---ILGVLNLTEKILSDF 391 Query: 217 GET--QVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 G T Q+ S PS++ D + W AA + N K +D + + Sbjct: 392 GFTNYQINLSTR------PSKSVGSDSV---------WELATAALIEALNAKKWDYIEDQ 436 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + G + +G ++ T ++LP + DG ++ + + G Sbjct: 437 GGGAFYGPKIDIKIQDAIGRMWQCSTIQVDFNLPERFDMQYVARDGTRERPIMIHRAIFG 496 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ ++ G +W +AP ++ L+ + Q + +L + G V Sbjct: 497 SLERFFGILIENYAGDFPLW---LAPIQVRLLPVSDEQQ---HYALGVAMQLKQAGYRVE 550 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D GE++G Q +L P+ ++G + VS + ++ R G M+L +++ Sbjct: 551 IDKTGERLGKQIRTGELEKIPVLAVIGKREVSSKTLSVRTRQGGDLGSMTLVDLLG 606 >gi|30262390|ref|NP_844767.1| threonyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47527681|ref|YP_019030.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49185231|ref|YP_028483.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|165870612|ref|ZP_02215266.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167633022|ref|ZP_02391348.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167639601|ref|ZP_02397871.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170686938|ref|ZP_02878157.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170706731|ref|ZP_02897190.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177649587|ref|ZP_02932589.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190565155|ref|ZP_03018075.1| threonyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227814802|ref|YP_002814811.1| threonyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|229603163|ref|YP_002866723.1| threonine--tRNA ligase [Bacillus anthracis str. A0248] gi|254684964|ref|ZP_05148824.1| threonyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254722370|ref|ZP_05184158.1| threonyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254737411|ref|ZP_05195115.1| threonyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254743403|ref|ZP_05201088.1| threonyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254751726|ref|ZP_05203763.1| threonyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254760245|ref|ZP_05212269.1| threonyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|30257021|gb|AAP26253.1| threonine--tRNA ligase [Bacillus anthracis str. Ames] gi|47502829|gb|AAT31505.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49179158|gb|AAT54534.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|164713767|gb|EDR19290.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167512310|gb|EDR87686.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167531834|gb|EDR94499.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170128462|gb|EDS97330.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170668989|gb|EDT19733.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172084661|gb|EDT69719.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190563182|gb|EDV17147.1| threonyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227004862|gb|ACP14605.1| threonine--tRNA ligase [Bacillus anthracis str. CDC 684] gi|229267571|gb|ACQ49208.1| threonine--tRNA ligase [Bacillus anthracis str. A0248] Length = 639 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|328710126|ref|XP_001950747.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon pisum] Length = 714 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 87/414 (21%), Positives = 161/414 (38%), Gaps = 52/414 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G + P G + + I+ E + G E+ P + + LW SG + Y Sbjct: 326 FFHELSPGSCFFQPKGAHIYNTLIEFIKSEYRKRGFQEVVSPNIYNVKLWQTSGHWAHYA 385 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M D + P + +F +S+R LP + R+EL G+ Sbjct: 386 ENMFSF-DVEKETYALKPMNCPGHCLMFDHRNRSWRELPLRMADFGVLHRNELSGALTGL 444 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 R R F DA+ F T + + + + +LR + + + +R + P + Sbjct: 445 TRVRRFQQDDAHIFCTTDQIGQEMMSSL--DFLRHVYTVFGFTFHLRLSTRP------EK 496 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDVH 263 ++ GE +++ EN + SLNS E WT A Y D+ Sbjct: 497 YL-----GELEMW------------ENAEKQLADSLNSFGEPWTLNPGDGAFYGPKIDI- 538 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAM 322 + D+L + + ++ F +++L F G K V + G++ Sbjct: 539 --TISDALKRQHQCATIQLD----FQLPIRFNL----NFISESGEKKRPVIIHRAIFGSV 588 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFW 381 + A++ S GK WP ++P + +I + D+ ++IY DV Sbjct: 589 ERMIAILTESFAGK---WPFWLSPRQAIVIPVGPQFDEYSEKVKKEIYEAGFMCDVDV-- 643 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D G+ + + A L + ++VG K + + V ++ R + + S+EE I Sbjct: 644 -DHGDTLNKKIRNAQLAQYNFILVVGDKEKTANTVNVRTRDNNVHGEFSIEETI 696 >gi|313678636|ref|YP_004056376.1| glycine--tRNA ligase [Mycoplasma bovis PG45] gi|312950688|gb|ADR25283.1| glycine--tRNA ligase [Mycoplasma bovis PG45] Length = 458 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 13/133 (9%) Query: 319 IGAMRVVAAVIESSHDGKGII---------WPDSVAPFKISLINIKAHDQVCRDACEKIY 369 IG R++ A++ S+D + I P SVAP+K +++ + + D E+IY Sbjct: 329 IGLDRLMLALLIDSYDEEAISENDSRIVLRMPKSVAPYKFAILPLV---KKLNDKAEEIY 385 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L K+ + +DD G IG ++ D +G P + V ++D + I++R + ++E + Sbjct: 386 KELLKLNIAITYDDAG-SIGKRYRRQDSIGTPYCITVDYDSLNDECITIRNRDSMLQERI 444 Query: 430 SLEEVINYASHRF 442 S+ E+ N A + F Sbjct: 445 SISELYNLAKNDF 457 >gi|168182030|ref|ZP_02616694.1| proline--tRNA ligase [Clostridium botulinum Bf] gi|182674785|gb|EDT86746.1| proline--tRNA ligase [Clostridium botulinum Bf] Length = 478 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/358 (18%), Positives = 142/358 (39%), Gaps = 79/358 (22%) Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--L 137 WV G D LA+R + PT E + + + ++SY++LP + Q + Sbjct: 97 WVTHGGDDE-------LAER----LCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVV 145 Query: 138 KFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK-HSYNKMFVSYLRIFHRLGLKSIPMR 196 ++ RP +R+ EFL ++ ++ T E ++ HS + L ++ RL + M Sbjct: 146 RWEKTTRP---FLRTTEFLWQEGHTIHETKEEAESHS-----LKILNMYSRLCEDMLAMP 197 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 +V+ + + F D D ++ S++ Sbjct: 198 --------------VVMGKKTDKEKFAGAD--------------DTYTIESLMH------ 223 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 + ++ G Y G +S + F +GK Y + Sbjct: 224 ---------------------DGKALQAGTSHYLGQNFSKAFAIQFSDRNGKLDYPHYTT 262 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 + + R++ A+I D G+ P +AP + +I + H + + +++ +L+KV Sbjct: 263 WAV-TTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAKELKEKLAKV- 320 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V DD + G +++ ++ G PL++ +G K + ++ + R + +SL+E+ Sbjct: 321 VRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDEI 378 >gi|89053589|ref|YP_509040.1| threonyl-tRNA synthetase [Jannaschia sp. CCS1] gi|88863138|gb|ABD54015.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Jannaschia sp. CCS1] Length = 648 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 9/177 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q G +E++ P + LW +SG +D Y + Sbjct: 260 MQEEAPGQVFWHPNGWTIYTTLQDYMRRKQRADGYVEVNTPQVVDRALWEKSGHWDKYQE 319 Query: 92 EMLRLADRNDKAMIYG-----PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + + A P + ++F +KSYR+LP + R E Sbjct: 320 HMFIVEVDEEHAQTKAINALKPMNCPCHVEVFNQGLKSYRDLPLRMAEFGSCSRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP 201 G+MR R F DA+ F E + F+++L ++ LG +S + + P Sbjct: 380 LHGIMRVRGFTQDDAHIF--CTEDQIEAECAKFITFLSGVYKDLGFESFDIAFATRP 434 >gi|319786721|ref|YP_004146196.1| threonyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317465233|gb|ADV26965.1| threonyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 634 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 78/411 (18%), Positives = 156/411 (37%), Gaps = 45/411 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R TG E+ P + LW +SG +D+Y Sbjct: 256 LQEEAPGLVFWHPKGWSVWQVVEQYMRRVYRETGYGEVRCPQILDVSLWKKSGHWDNYQD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF + SYR+LP + + R+E G++ Sbjct: 316 NMF-FTESEKRTYAVKPMNCPGHVQIFNQGLHSYRDLPIRYGEFGSCHRNEPSGALHGIL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F T + + L+++ G + I ++ P +G D + Sbjct: 375 RVRGFTQDDGHVF-CTEQQIESEVRAFHAQALKVYTDFGFEDIQIKIALRPDNRLGDDAT 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + ++D + + + ++ ++ + Y + H L Sbjct: 434 WD-------------KAEDALRSALRASGVEWQELPGEGAF-------YGPKIEYH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S + H V + +G+M Sbjct: 471 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------RRHPVMLHRAIVGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G+ +P +AP + ++NI V + ++ L+ G V D E+ Sbjct: 524 ILIEHHAGQ---FPAWLAPVQAVVMNIT---DVQAEYVNEVRKVLANQGFRVEADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 IG + L P ++VG + + V ++ R +G ED+ V ++A Sbjct: 578 IGFKIREHTLQRVPYLLVVGDREKENGAVAVRTR-SG--EDLGTMSVSDFA 625 >gi|52143093|ref|YP_083736.1| threonyl-tRNA synthetase [Bacillus cereus E33L] gi|51976562|gb|AAU18112.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus E33L] Length = 639 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|73540970|ref|YP_295490.1| threonyl-tRNA synthetase [Ralstonia eutropha JMP134] gi|123732957|sp|Q472N7|SYT_RALEJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|72118383|gb|AAZ60646.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Ralstonia eutropha JMP134] Length = 635 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 9/205 (4%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + V +R G E+ P + LW +SG + +Y K Sbjct: 255 LQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTAAGYDEVRTPQVMDRSLWEKSGHWQNY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + IF ++SYR+LP + R+E G+M Sbjct: 314 ENMFVTESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R F+ DA+ F + ++N++ S ++ G K + ++ P S Sbjct: 374 RVRGFVQDDAHIFCTEEQIVAEAKAFNELAFS---VYDDFGFKDVAVKLSLRPAQRAGSD 430 Query: 209 EFIVLADTGETQVF--CSKDFMDFP 231 E A+ G C D+ + P Sbjct: 431 EVWDHAEEGLRLALRACGVDWEELP 455 >gi|319404307|emb|CBI77900.1| Threonyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498] Length = 654 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 21/215 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H+ + R + H + S G+ W P G K N+ + +R Sbjct: 233 KAYLHMLEE----AEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRL 288 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA----DRNDK-AMIYGPTHEEVMTD 116 + E+ P + LW SG + Y + M + D ND+ P + Sbjct: 289 DNHKYAEVQAPQVLDKSLWEISGHWGWYKENMFKTIPAADDWNDEYTYALKPMNCPGHVQ 348 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKH--S 173 IF+ +KSYR+LP + L R E G+MR R F DA+ F + + S Sbjct: 349 IFKHGLKSYRDLPVRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEEQLADECLS 408 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 N + +S + G K I ++ + P +G D Sbjct: 409 INDLILS---TYADFGFKEISLKLSTRPEKRVGSD 440 >gi|167389590|ref|XP_001739012.1| threonyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760] gi|165897485|gb|EDR24628.1| threonyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar SAW760] Length = 676 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 8/161 (4%) Query: 10 ILQENPRDAEIAS---HKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L+E + AE A H+L+ R H S G WLP G + + + +IR E Sbjct: 266 LLKEYIKRAEEADKRDHRLIGRQQDLFFFHVLSPGSCFWLPHGTRIYNKLVQLIRSEYRV 325 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + + LW SG + Y +M + + P + +F S + Sbjct: 326 LGYQEVITPNIFLSTLWETSGHWQHYKDDMFSF-ECEKQTFALKPMNCPGHCVMFASKKR 384 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR LP + + + R+EL G+ R R F+ D++ F Sbjct: 385 SYRELPLRYAEFGVLHRNELTGALHGLTRVRRFVQDDSHIF 425 >gi|254456980|ref|ZP_05070408.1| threonyl-tRNA synthetase [Campylobacterales bacterium GD 1] gi|207085772|gb|EDZ63056.1| threonyl-tRNA synthetase [Campylobacterales bacterium GD 1] Length = 602 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 2/123 (1%) Query: 42 WLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND 101 WLP G + + +++ + + G + P + +DLW SG Y +YG+ M +D Sbjct: 232 WLPAGGRLRARLESLLYKAHRKRGYEPVRGPEMLRSDLWKTSGHYQNYGENMY-FTKIDD 290 Query: 102 KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDA 160 P + ++ ++SYR+LP +++ + R E G+ R REF DA Sbjct: 291 IEFGVKPMNCVGHIKVYEDELRSYRDLPIKYFEYGVVHRHEFTGALHGLFRVREFTQDDA 350 Query: 161 YSF 163 + F Sbjct: 351 HIF 353 >gi|299745880|ref|XP_001841372.2| tars protein [Coprinopsis cinerea okayama7#130] gi|298406796|gb|EAU80442.2| tars protein [Coprinopsis cinerea okayama7#130] Length = 720 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G + + + ++REE + G E+ P + ++ LW SG + +Y ++M Sbjct: 333 SPGSCFWLPHGTRIYNTLVELMREEYFKRGYQEVISPNMYNSKLWETSGHWQNYKEDMFT 392 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L +K + P + IF S +SY+ LP + + R+E G+ R R Sbjct: 393 LDVEKEKWAL-KPMNCPGHCLIFDSRDRSYKELPIRMAEFGIIHRNEASGALTGLTRVRR 451 Query: 155 FLMKDAYSF 163 F+ D + F Sbjct: 452 FVQDDTHVF 460 >gi|332525938|ref|ZP_08402079.1| threonyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] gi|332109489|gb|EGJ10412.1| threonyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] Length = 635 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 95/433 (21%), Positives = 158/433 (36%), Gaps = 71/433 (16%) Query: 7 FLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H +HS G W P G V +R Sbjct: 231 YLRMLEE----AEKRDHRKLGRELDLFHLDEHSPGTVFWHPKGWTVWQEVEQYMRRVYRD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + LW ++G +D Y + M +++ D A+ P + IF+ I Sbjct: 287 NGYQEVKGPQILDKALWEKTGHWDKYRENMFTTESEKRDYAL--KPMNCPGHILIFKQGI 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE---GSKHSYNKMF 178 KSYR+LP + + R+E G+MR R F D + F T + G +Y + Sbjct: 345 KSYRDLPLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIF-CTEDMILGECVAYTALL 403 Query: 179 VSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCS--KDFMDFPI- 232 R F G I + + P IG D + D E + S + D+ I Sbjct: 404 QKVYRDF---GFTDILYKVATRPEKRIGSD------AIWDKAEEALIESLKRSGCDYVIA 454 Query: 233 PSENTDFDDIISL---NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 P + + I ++I QW E+L Sbjct: 455 PGDGAFYGPKIEYTLKDAIGRQWQCGTMQVDFSMAERL---------------------- 492 Query: 290 FGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 A + DG + H V + +G++ ++ H G +W V Sbjct: 493 ---------DAEYVAEDGSRRHPVMLHRAIVGSLERFIGILIEQHAGALPVWLAPVQAVV 543 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 S+ + +A D ++ L K G V D E+I + + P ++VG Sbjct: 544 ASITDSQA------DYAAEVAKSLQKQGLRVHLDLRNEKINYKIREHSVQKAPFILVVGD 597 Query: 409 KFVSDSKVEIKHR 421 K ++ V ++ R Sbjct: 598 KEKANGAVAVRAR 610 >gi|194366578|ref|YP_002029188.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] gi|238693469|sp|B4SQH4|SYT_STRM5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194349382|gb|ACF52505.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] Length = 633 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 79/410 (19%), Positives = 148/410 (36%), Gaps = 44/410 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +TG E+ P + LW +SG +D+Y Sbjct: 256 LQEEAPGLVFWHPKGWALWQVVEQYMRKVYRKTGYGEVRCPQILDVSLWQKSGHWDNYQD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 316 AMF-FTESEKRTYALKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F T + L ++ G I ++ P +G D + Sbjct: 375 RVRGFTQDDGHVF-CTENQVEAEVTAFHQQALAVYQHFGFDEIQVKIALRPESRLGDDAT 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ S +P E A Y + H L Sbjct: 434 WD---KAEGALRSALSSNGVEWQELPGEG-----------------AFYGPKIEYH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 471 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFLG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ H G+ +P +AP ++ + NI A + D + + + +V D+ E Sbjct: 524 ILIEHHAGQ---FPAWLAPTQVVVANITDAQAEYVSDVTKTLADQGFRVSADL----RNE 576 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +IG + L P +++G + + V ++ R MSL+ I Sbjct: 577 KIGYKIREHTLQRVPYLLVIGDREKENGAVAVRTRSGEDLGSMSLQAFIE 626 >gi|34482934|emb|CAE09933.1| THREONYL-TRNA SYNTHETASE [Wolinella succinogenes] Length = 536 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + A++ E R + P + +DLW SG Y +Y KE + Sbjct: 162 GLPIWLPAGARLRRRLEAMLTEAHIRRNYEPVRGPEILKSDLWKISGHYQNY-KENMYFT 220 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + ++ S ++SYR LP FY+ + R E G++R REF Sbjct: 221 KIDEVEYGIKPMNCVGHIKVYGSGVRSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFT 280 Query: 157 MKDAYSF 163 DA+ F Sbjct: 281 QDDAHIF 287 >gi|238757782|ref|ZP_04618965.1| Threonyl-tRNA synthetase [Yersinia aldovae ATCC 35236] gi|238704025|gb|EEP96559.1| Threonyl-tRNA synthetase [Yersinia aldovae ATCC 35236] Length = 642 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 83/398 (20%), Positives = 147/398 (36%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 D +E+ D ++ N I + A E Sbjct: 432 ---------------------DLWTRAED-DLAAALTENGIPFDYQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L D L R + G + +SLP +SA++ G + M I G+M Sbjct: 470 LHDCLD-------RAWQCGTV---QLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSME 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++NI D +++ +L G D Sbjct: 520 RFIGILTEEYAG---FFPTWLAPVQVVVMNITDSQS---DYVQQVTKKLQDAGIRAKADL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V K+ ++ R Sbjct: 574 RNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTR 611 >gi|118575566|ref|YP_875309.1| prolyl-tRNA synthetase [Cenarchaeum symbiosum A] gi|152016594|sp|A0RUI8|SYP_CENSY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118194087|gb|ABK77005.1| prolyl-tRNA synthetase [Cenarchaeum symbiosum A] Length = 476 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 5/170 (2%) Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 ++ + E+ R +++G + G +S P F D +H+ S+G+ + R++ Sbjct: 209 VYTTTMESMMPDGRALQMGTSHFLGQNFSRPFEVKFADKDNVEHFAWQTSWGL-SWRLIG 267 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD---ACEKIYARLSKVGCDVFWDD 383 A+I D KG++ P VAP ++ +I I + A E + A L K G D Sbjct: 268 AMIMVHGDDKGLVLPPKVAPLQVVIIPISYSGEEGAQVLAAAEGMEAELLKAGIRARTDK 327 Query: 384 MGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 E G +F ++ G P+++ +G + + D + R G + + L+ Sbjct: 328 REELTPGFKFHDWEMRGVPVRIEIGPRDLKDGSAVLATRHDGKKSKVPLD 377 >gi|152975545|ref|YP_001375062.1| threonyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024297|gb|ABS22067.1| threonyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 640 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 2/138 (1%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + +RE Q E+ P + + +LW +SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEGFLREIQQAYDYQEVRTPLMMNQELWEKSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D Y K+ + ++ + K+ P + IF+ ++SYR+LP + R E Sbjct: 314 DHY-KDNMYFSEVDHKSFALKPMNCPGHMLIFKHKLRSYRDLPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSF 163 G++R R F DA+ + Sbjct: 373 LNGLLRVRTFCQDDAHIY 390 >gi|124267077|ref|YP_001021081.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylibium petroleiphilum PM1] gi|166225459|sp|A2SH07|SYT_METPP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|124259852|gb|ABM94846.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylibium petroleiphilum PM1] Length = 635 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 11/162 (6%) Query: 7 FLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H +H+ G+ W P G V +R Sbjct: 231 YLHMLEE----AEKRDHRKLGRELDLFHLDEHAPGLVFWHPKGWTVWQQVEQYMRAVYRD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G +E+ P + LW ++G +D Y + M + +++ D A+ P + I++ I Sbjct: 287 NGYLEVKGPQILDQGLWEKTGHWDKYRENMFVTESEKRDYAL--KPMNCPGHILIYKQGI 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 KSYR+LP + + R+E G+MR R F D + F Sbjct: 345 KSYRDLPLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIF 386 >gi|122891384|emb|CAM13348.1| novel prtoein similar to vertebrate threonyl-tRNA synthetase (TARS, zgc:92586) [Danio rerio] Length = 718 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 89/420 (21%), Positives = 160/420 (38%), Gaps = 67/420 (15%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IR E + G E+ P + ++ LW SG + Y + Sbjct: 331 HDLSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIYNSKLWQTSGHWQHYSEN 390 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + +F +S+R LP + R+EL G+ R Sbjct: 391 MFSF-EVEKEIFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTR 449 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH-------RLGLKSIPMRAESGPIGG 204 R F DA+ F S K + +LR + +L L + P + P Sbjct: 450 VRRFQQDDAHIF--CSMDQIESEIKGCLDFLRTVYDVFGFTFKLNLSTRPEKFLGEP--- 504 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAA 258 + D E Q+ EN SLN E+W A Y Sbjct: 505 -------EVWDQAEKQL-------------EN-------SLNDFGEKWVLNPGDGAFYGP 537 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGS 316 D+ ++ D++ + + ++ F +++L TF DG D V + Sbjct: 538 KIDI---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TFVSHDGDDKKRPVIIHR 586 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 +G++ + A++ ++ GK WP ++P ++ ++ I C + +++ KVG Sbjct: 587 AILGSVERMIAILTENYGGK---WPLWLSPRQVMVVPIGP---TCDEYAQRVQKEFHKVG 640 Query: 377 CDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + ++VG K S V ++ R + + SL + + Sbjct: 641 LMTDVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLTDCM 700 >gi|292655033|ref|YP_003534930.1| prolyl-tRNA synthetase [Haloferax volcanii DS2] gi|291371489|gb|ADE03716.1| prolyl-tRNA synthetase [Haloferax volcanii DS2] Length = 488 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/338 (20%), Positives = 125/338 (36%), Gaps = 63/338 (18%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++S+R+LP Q R E R++EFL ++ ++ T Sbjct: 115 PTSESIIAPYMAQWVRSHRDLPLRVNQWASVVRWEATETKPFFRTKEFLWQEGHTAHETR 174 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 +G+ Y ++ + +IP+ + P H+ ADT T Sbjct: 175 DGAWDETMTRLSQYQSLYE--DVLAIPVLRGAKP-----EHDKFPGADTTTT-------- 219 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + +L +P+ K V A G Sbjct: 220 --------------VEAL-------------------------MPDGKSVQA-----GTS 235 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 Y GT ++ T+ D + S+G+ + R + A+I + D +G++ P ++AP Sbjct: 236 HYLGTSFAEAFDLTYTTEDEDEEPAHTTSWGL-SWRSLGALIMTHSDDQGLVLPPTIAPE 294 Query: 348 KISLINIKAHD--QVCRDACEKIYARLSKVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQV 404 ++ ++ I D + D + I L G V D E+ G +F +L G P++ Sbjct: 295 QVVIVPIWQADTQEKVLDYAKDIAEDLEDAGVRVELDARDERNPGFKFNEWELKGVPVRF 354 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +G V D V HR G ++ E + +F Sbjct: 355 EIGPNEVDDDVVTAVHRPDGDSVELDRENIAEAVQAQF 392 >gi|302035784|ref|YP_003796106.1| threonyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|300603848|emb|CBK40180.1| Threonyl-tRNA synthetase [Candidatus Nitrospira defluvii] Length = 651 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 81/401 (20%), Positives = 145/401 (36%), Gaps = 37/401 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + RE+ + G + P + DLW SG D Y + M Sbjct: 266 GLVLWHPKGSLIRLLIENFWREQHIKDGYDLVYSPHVARLDLWKTSGHVDYYRENMFASM 325 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 P + I++SH++SYR+LP + ++ +R E G++R R F Sbjct: 326 KLEGSEYQLKPMNCPFHIMIYKSHMRSYRDLPIRYGELGTVYRYERTGVLHGLLRVRGFT 385 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F P+ + +++ + G + + P S E +A Sbjct: 386 QDDAHLF-CRPDQIEAEVSRVLDFTFFVLGTFGFTEFEVYLSTRPDKSVGSEENWTIATN 444 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 S+ P E + I + K+ D L + + Sbjct: 445 ALEAALKSRGVAYEVDPGEGVFYGPKIDI--------------------KIKDVLGRSWQ 484 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDG 335 S ++ + F Y+ G DGK H + + +G++ ++ + G Sbjct: 485 CSTVQVDFNNPERFKLAYT--------GEDGKAHQPIMIHRALMGSIERFFGILIEHYAG 536 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 +P +AP + ++ I + Q + KI + L G V D E+IG + A Sbjct: 537 A---FPTWLAPVQAVVLTITDNQQ---EFAAKIVSTLKSHGFRVEADLRNEKIGFKIREA 590 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + P ++VG K V V ++ R M +E + Sbjct: 591 EKNKIPYMLVVGDKEVQSGMVAVRGRSGANHGSMPIEAFLE 631 >gi|227524682|ref|ZP_03954731.1| threonine--tRNA ligase [Lactobacillus hilgardii ATCC 8290] gi|227088166|gb|EEI23478.1| threonine--tRNA ligase [Lactobacillus hilgardii ATCC 8290] Length = 658 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 79/386 (20%), Positives = 150/386 (38%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + DL+ +SG ++ Y ++M Sbjct: 274 GLPYWMPNGATIRRTIERYIVDKEVANGYEHVYTPVLANLDLYKQSGHWEHYREDMFPPM 333 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D + + P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 334 DMGDGEELELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 393 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + + + ++H + R LS+ D Sbjct: 394 TLNDGHTF-VALDQIQEEFQNILKLMVEVYHDFDINDYTFR---------LSYR-----D 438 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S D + L+ + E A Y DV + +L Sbjct: 439 PENTEKYFDDDEMWNRAQSMLKGAMDELGLDYVEAEGEAAFYGPKLDVQTKT---ALGNE 495 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F ++ L + G DGK H M G + M A + + Sbjct: 496 ETLSTIQLD----FMLPERFDL----HYVGEDGKQHRPVMIHRGLVSTMERFVAYLTEIY 547 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++ +I + D ++I +L ++ D E++G Sbjct: 548 KGAFPTW---LAPHQVKIIPVSQDKH--GDYAKQINDQLRRLKIRSSVDTRAEKMGYLIR 602 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P ++VG + V+ V ++ Sbjct: 603 DAQTHKIPYTLVVGDEEVNGKSVSVR 628 >gi|227513539|ref|ZP_03943588.1| threonine--tRNA ligase [Lactobacillus buchneri ATCC 11577] gi|227083412|gb|EEI18724.1| threonine--tRNA ligase [Lactobacillus buchneri ATCC 11577] Length = 658 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 79/386 (20%), Positives = 150/386 (38%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + DL+ +SG ++ Y ++M Sbjct: 274 GLPYWMPNGATIRRTIERYIVDKEVANGYEHVYTPVLANLDLYKQSGHWEHYREDMFPPM 333 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D + + P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 334 DMGDGEELELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 393 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + + + ++H + R LS+ D Sbjct: 394 TLNDGHTF-VALDQIQEEFQNILKLMVEVYHDFDINDYTFR---------LSYR-----D 438 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S D + L+ + E A Y DV + +L Sbjct: 439 PENTEKYFDDDEMWNRAQSMLKGAMDELGLDYVEAEGEAAFYGPKLDVQTKT---ALGNE 495 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F ++ L + G DGK H M G + M A + + Sbjct: 496 ETLSTIQLD----FMLPERFDL----HYVGEDGKQHRPVMIHRGLVSTMERFVAYLTEIY 547 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++ +I + D ++I +L ++ D E++G Sbjct: 548 KGAFPTW---LAPHQVKIIPVSQDKH--GDYAKQINDQLRRLKIRSSVDTRAEKMGYLIR 602 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P ++VG + V+ V ++ Sbjct: 603 DAQTHKIPYTLVVGDEEVNGKSVSVR 628 >gi|149235762|ref|XP_001523759.1| hypothetical protein LELG_05175 [Lodderomyces elongisporus NRRL YB-4239] gi|146452738|gb|EDK46994.1| hypothetical protein LELG_05175 [Lodderomyces elongisporus NRRL YB-4239] Length = 688 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/336 (20%), Positives = 130/336 (38%), Gaps = 72/336 (21%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + I+S+R+LP Q R E + +R+REFL ++ ++ L Sbjct: 291 PTSETVMYPYYAKWIRSHRDLPIKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTAHLYK 350 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + ++ ++ Y I+ L ++P +V E + F D+ Sbjct: 351 KEAEEEVLQILDYYAAIYEE--LLAVP----------------VVKGKKTENEKFAGGDY 392 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 T + I + RGI+ G Sbjct: 393 --------TTTVEGFIP--------------------------------ATGRGIQGGTS 412 Query: 288 FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 + G +S + + + +G + + S+G+ + RV+ ++ + D KG++ P V Sbjct: 413 HHLGQNFSKMFNMSVESPEGPEKGRLFAYQNSWGL-STRVIGVMVMTHSDNKGLVLPPRV 471 Query: 345 APFKISLINI--------KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVA 395 A ++ +I + + +Q+ + A + I +RL K G V D G +FA Sbjct: 472 AQTQVVVIPVGITAKTSAEQREQINKGAAD-IESRLKKAGIRVTGDYRDSYNPGWKFADW 530 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 +L G PL+V G K + +V R G + ++ L Sbjct: 531 ELKGVPLRVEFGPKDLESEQVTAVRRNDGQKLNVKL 566 >gi|67471890|ref|XP_651857.1| prolyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS] gi|56468636|gb|EAL46467.1| prolyl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS] Length = 536 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/334 (21%), Positives = 128/334 (38%), Gaps = 65/334 (19%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ F++ I +R+LP Q R E + +R+REFL ++ ++ T Sbjct: 143 PTSETIIYPAFKNWISGHRDLPIKVNQWCNVVRWEFSHPYPFIRTREFLWQEGHTAFATQ 202 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++ +++ Y ++ L ++P+ I G S GET Sbjct: 203 AEAEKECHEILELYASVYE--DLLAVPV------IRGKKSK--------GET-------- 238 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 FP + + II N R ++ G Sbjct: 239 --FPGAYYSLTVECIIPTN--------------------------------GRSVQAGTS 264 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + G +S F+ D K V S+G+ + R + I + D KGII P A Sbjct: 265 HHLGQTFSKLFQIEFEDEDNKKQLVWQNSWGL-STRSIGVTIMTHGDNKGIIVPPRAAQK 323 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKV----GCDVFWD-DMGEQIGSQFAVADLLGFPL 402 ++ +I + H D + L++V G F D + + G +F+ ++ G P+ Sbjct: 324 QVVIITLH-HKGSPNDEMDAKAEELTQVLIDNGIRAFADTNEMHKPGWKFSEYEMRGIPI 382 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 ++ +G + KV I R G + + S E++I Sbjct: 383 RIELGPRDYEGKKVVIVRRDNGAKSESSWEDLIT 416 >gi|315453307|ref|YP_004073577.1| threonyl-tRNA synthetase [Helicobacter felis ATCC 49179] gi|315132359|emb|CBY82987.1| threonyl-tRNA synthetase [Helicobacter felis ATCC 49179] Length = 612 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 85/413 (20%), Positives = 159/413 (38%), Gaps = 47/413 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ R+G + P + + LW SG Y++Y KE + Sbjct: 238 GLPIWLPNGMRLRKRIEDLLSVALLRSGYEPVRGPEILKSSLWKISGHYENY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + +++ ++SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEVEYGIKPMNCVGHIKVYQHALRSYRDLPLRFYEYGVVHRHEQSGVLHGLLRVREFT 356 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F + K V + F + + G G D E T Sbjct: 357 QDDAHIF------CRFDQIKAEVQAILAFTKRVM---------GAFGFDYEMEL----ST 397 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 T+ S + + + ++ + E A Y D+ K+ D++ + Sbjct: 398 KPTKYIGSDEVWEQATSALKEALEEQGVPFKVDEGGGAFYGPKIDI---KITDAIRRKWQ 454 Query: 277 VSARGIEVG-----HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 +++ H+ Y + S M H +GS+ R +A + E Sbjct: 455 CGTVQVDMNLPARFHLSYASEQDSPEMPVMI-------HRAILGSF----ERFIAVLTE- 502 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 H G +P +AP +++L+ I A DQ D + + +L G + E + + Sbjct: 503 -HYGGN--FPFFIAPVQVALVPISA-DQ--HDYAQDLCTQLRHAGIFAEVANKNESLAKR 556 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + PL ++G+K ++ + I+ R G + M +E IN + Sbjct: 557 IRTLEKQKVPLIAVIGAKETQENALAIRDRALGEQYTMDSKEFINMCQEKMQE 609 >gi|227510530|ref|ZP_03940579.1| threonine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190182|gb|EEI70249.1| threonine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 658 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 79/386 (20%), Positives = 150/386 (38%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + DL+ +SG ++ Y ++M Sbjct: 274 GLPYWMPNGATIRRTIERYIVDKEVANGYEHVYTPVLANLDLYKQSGHWEHYREDMFPPM 333 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D + + P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 334 DMGDGEELELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 393 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + + + ++H + R LS+ D Sbjct: 394 TLNDGHTF-VALDQIQEEFQNILKLMVEVYHDFDINDYTFR---------LSYR-----D 438 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + D M S D + L+ + E A Y DV + +L Sbjct: 439 PENTEKYFDDDEMWNRAQSMLKGAMDELGLDYVEAEGEAAFYGPKLDVQTKT---ALGNE 495 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F ++ L + G DGK H M G + M A + + Sbjct: 496 ETLSTIQLD----FMLPERFDL----HYVGEDGKQHRPVMIHRGLVSTMERFVAYLTEIY 547 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++ +I + D ++I +L ++ D E++G Sbjct: 548 KGAFPTW---LAPHQVKIIPVSQDKH--GDYAKQINDQLRRLKIRSSVDTRAEKMGYLIR 602 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 A P ++VG + V+ V ++ Sbjct: 603 DAQTHKIPYTLVVGDEEVNGKSVSVR 628 >gi|218282135|ref|ZP_03488434.1| hypothetical protein EUBIFOR_01014 [Eubacterium biforme DSM 3989] gi|218216861|gb|EEC90399.1| hypothetical protein EUBIFOR_01014 [Eubacterium biforme DSM 3989] Length = 587 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 96/427 (22%), Positives = 167/427 (39%), Gaps = 67/427 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G+ +LP G + + +E + G + P + S +LW SG +D Y K Sbjct: 202 ISEFAPGMPIFLPDGMILRNILEQYWYQEHTKEGYQFIKTPIMMSKELWELSGHWDHY-K 260 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 + + + +D+ P + ++ S + SY++LP ++ R E G+ Sbjct: 261 DNMYTSMVDDREFAIKPMNCPGALLVYNSTLHSYKDLPLRLGELGQVHRHEASGALNGLF 320 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLS 207 R R F DA+ F +TP+ + K+ RI+ GL + R ESG IG S Sbjct: 321 RVRTFTQDDAHLF-VTPDQLEEEVKKVLQLVDRIYSVFGLPYEIELSTRPESGYIG---S 376 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E +++ Q C ++ + + F Y D+H + Sbjct: 377 EEIWDVSEKALAQA-CVHAGKEYKVNPGDGAF----------------YGPKLDIH---I 416 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKD------HYVQMGS 316 DSL G ++ GT +LP + ADG H V GS Sbjct: 417 KDSL-------------GRVWQCGTVQLDMNLPERFECKYVDADGTKKTPIMLHRVVYGS 463 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 R + +IE G +P +AP + +I + V + K+ L+ +G Sbjct: 464 ----VERFIGILIEHF----GGHFPLWLAPRQFVVIPVHHEKHV--EYANKVCDALTALG 513 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E++G + A L Q++VG ++ V I R +G ++ ++L +N Sbjct: 514 MRATVDSRNEKLGYRVREAQLQKVTYQIVVGDGEQENNTVTI--RQSGKKDSVTLS--LN 569 Query: 437 YASHRFS 443 A +F Sbjct: 570 EALAKFK 576 >gi|320580027|gb|EFW94250.1| Threonyl-tRNA synthetase [Pichia angusta DL-1] Length = 714 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G WLP G + + + ++R + + G E+ P + ++ LW SG + +Y Sbjct: 323 FFHEMSPGSCFWLPHGARIYNGLCELLRTQYRKRGYEEVITPNMYNSKLWETSGHWANYK 382 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M D + P + +F+S +SYR LP+ + R+E G+ Sbjct: 383 ENMFTFEVEKDTFGL-KPMNCPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 441 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 442 TRVRRFQQDDAHIF 455 >gi|291518260|emb|CBK73481.1| prolyl-tRNA synthetase, family I [Butyrivibrio fibrisolvens 16/4] Length = 479 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG +S P + + + YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGQNFSKPFGIQYTDKNNQLQYVHQTSWGM-TTRLIGAIIMVHGDDSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ +I I+ + + ++ +L K DD + G +F+ A++ Sbjct: 284 VLPPRIAPTQVVVIPIQQKKEGVLEKAGEVCEKLGKT-MRAKLDDSDKSPGWKFSEAEMR 342 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P++V +G K + K + R T + + L++V Sbjct: 343 GIPVRVELGPKDIEAGKCVLVRRDTREKIECPLDQV 378 >gi|256844949|ref|ZP_05550407.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] gi|256718508|gb|EEU32063.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] Length = 637 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 86/428 (20%), Positives = 175/428 (40%), Gaps = 56/428 (13%) Query: 3 RSKYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 R K L +++E AE H+ + L + ++ G +LP G + + + R+ Sbjct: 226 RLKKHLKLMEE----AEKRDHRKLGKELELFFLSEYGPGFPFFLPKGMIIRNVLIDLWRK 281 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E + G +++ P + + +LW SG + +Y +E + ++ ++ P + F+ Sbjct: 282 EHEKAGYLQLETPIMLNKELWEISGHWFNY-RENMYTSEIDELEFAIKPMNCPGGVLSFK 340 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + SY++LP ++ R E G+MR R F D++ F +TP+ + Sbjct: 341 HQLHSYKDLPARLAELGRVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEI---- 395 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 +G+ ++ + S G E+ + T + S++ D + Sbjct: 396 ---------IGVVNLIDKFYSKLFG----FEYEIELSTKPEKAIGSQEIWDMAEAALAGA 442 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYS 295 D + I A Y D K+ D+ +G ++ GT ++ Sbjct: 443 LDKLGRKYKINPGDGAFYGPKLDF---KIKDA-------------IGRMWQCGTIQLDFN 486 Query: 296 LP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 LP T+ G DG+ H V + G++ ++ + G +W +AP ++ ++ Sbjct: 487 LPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFSMW---LAPVQVKVL 543 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFV 411 + + C ++I +L ++G DD E IG + A+ P+Q+I+G V Sbjct: 544 TL---NDECIPYAKEIMDKLEELGIRAELDDRNETIGYKIREANGKYKIPMQLIIGKNEV 600 Query: 412 SDSKVEIK 419 + +V I+ Sbjct: 601 ENKEVNIR 608 >gi|218563696|ref|NP_001116258.1| threonyl-tRNA synthetase, cytoplasmic isoform 1 [Danio rerio] gi|158253608|gb|AAI54372.1| Zgc:92586 protein [Danio rerio] Length = 718 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 89/420 (21%), Positives = 160/420 (38%), Gaps = 67/420 (15%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IR E + G E+ P + ++ LW SG + Y + Sbjct: 331 HDLSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIYNSKLWQTSGHWQHYSEN 390 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + +F +S+R LP + R+EL G+ R Sbjct: 391 MFSF-EVEKEIFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTR 449 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH-------RLGLKSIPMRAESGPIGG 204 R F DA+ F S K + +LR + +L L + P + P Sbjct: 450 VRRFQQDDAHIF--CSMDQIESEIKGCLDFLRTVYDVFGFTFKLNLSTRPEKFLGEP--- 504 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAA 258 + D E Q+ EN SLN E+W A Y Sbjct: 505 -------EVWDQAEKQL-------------EN-------SLNDFGEKWVLNPGDGAFYGP 537 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGS 316 D+ ++ D++ + + ++ F +++L TF DG D V + Sbjct: 538 KIDI---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TFVSHDGDDKKRPVIIHR 586 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 +G++ + A++ ++ GK WP ++P ++ ++ I C + +++ KVG Sbjct: 587 AILGSVERMIAILTENYGGK---WPLWLSPRQVMVVPIGP---TCDEYAQRVQKEFHKVG 640 Query: 377 CDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + ++VG K S V ++ R + + SL + + Sbjct: 641 LMTDVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLTDCM 700 >gi|220931402|ref|YP_002508310.1| Threonyl-tRNA synthetase [Halothermothrix orenii H 168] gi|219992712|gb|ACL69315.1| Threonyl-tRNA synthetase [Halothermothrix orenii H 168] Length = 646 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD--RND 101 P G K + + + +E+ + G P + +DL+ SG +D Y ++M L D ++D Sbjct: 269 PKGAKVVQILQRFVEDEEEKRGYQLTKTPYMAKSDLYKISGHWDHYKEDMFILGDEEKDD 328 Query: 102 KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDA 160 + + P I+ S ++SYR+LP + + FR+E G++R R+F + + Sbjct: 329 EVLALRPMTCPFQFMIYNSKLRSYRDLPLRYSETSTLFRNEASGEMHGLIRVRQFTISEG 388 Query: 161 YSFDLTPE 168 + TPE Sbjct: 389 HII-CTPE 395 Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 11/124 (8%) Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 H +G Y R +A +IE +P +AP ++ +I + + DQV D ++ Sbjct: 520 HRTSVGCYE----RTLAMLIEKYAGA----FPTWLAPVQVEIIPV-SDDQV--DYAYEVK 568 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L + G V DD E++G + A + P +IVG++ V + V ++ R G + Sbjct: 569 GILKEAGIRVEVDDTNEKLGYKIRQAQMEKIPYMLIVGNREVENRTVSVRDRKEGDLGAI 628 Query: 430 SLEE 433 S++E Sbjct: 629 SIKE 632 >gi|291537165|emb|CBL10277.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Roseburia intestinalis M50/1] Length = 494 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 2/143 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ +LP G + I+ ++ + G + + P + + +L+ SG +D Y + M Sbjct: 200 GRGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMTPCVGTVNLYKTSGHWDHYKENMFP 259 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + ++ + P + I+ + + SY++LP +I FR E G+ R R Sbjct: 260 AMEVEGESFVLRPMNCPHHMMIYANRMHSYKDLPIRIGEIAHDFRFEASGTLKGIERGRH 319 Query: 155 FLMKDAYSFDLTPEGSKHSYNKM 177 F DA+ F +TPE + + K+ Sbjct: 320 FCQNDAHLF-VTPEQIESEFAKV 341 >gi|219113513|ref|XP_002186340.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583190|gb|ACI65810.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 766 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 5/163 (3%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K L + +EN A+ H+ + M H S G WLP G + + + I+ Sbjct: 351 KKMLKVWKENQEKAKERDHRRIAAKQDLIMFHDLSAGSAFWLPHGARIYNKLIDFIKSHY 410 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P + + DLW +SG Y K+ + D + P + +F + Sbjct: 411 WNRGYDEIITPNIYNLDLWHKSGHALHY-KDAMFCFDVEGQEWAMKPMNCPGHCLMFANS 469 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 I+SYR+LP F + R+EL G+ R R F DA+ + Sbjct: 470 IRSYRDLPLRFADFGVLHRNELSGALTGLTRVRRFQQDDAHIY 512 >gi|325282970|ref|YP_004255511.1| Prolyl-tRNA synthetase [Deinococcus proteolyticus MRP] gi|324314779|gb|ADY25894.1| Prolyl-tRNA synthetase [Deinococcus proteolyticus MRP] Length = 505 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/340 (19%), Positives = 133/340 (39%), Gaps = 68/340 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ + SYR+LPF Q FR EL R++ FL + + Sbjct: 131 PTSETIIGHMWSGWLNSYRDLPFLHNQWGSVFRAEL-------RTKPFLRTSEFFWQ--- 180 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 EG H RAE V E FC Sbjct: 181 EG----------------HTAHASEAEARAE-------------VRQQLDEYHSFCR--- 208 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAP--YAATSDVHNEKLFDSLPENKRVSARGIEVG 285 D+++L + + TA +A + ++ E + ++ G Sbjct: 209 -------------DVLALPVVRGEKTASERFAGAENTYS-------IEGMMRDGKALQSG 248 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 Y G +S F+ A+ ++ + S+G+ + R++ A+I + D G++ P ++A Sbjct: 249 TSHYLGQNFSRAFEVKFQTAEQREEFAYTTSWGLSS-RIIGALIMTHGDDFGLMLPPNIA 307 Query: 346 PFKISLINIKAHDQVCR--DACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPL 402 P ++ ++ + + R + + A L + G V DD G G ++ +L G P+ Sbjct: 308 PIQVVIVPVGRKEDFARMVEEARTLAAELEREGIRVKVDDREGLTNGFKYNDWELKGVPV 367 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 ++ +G + + ++ +K+R + +E + + ++ R Sbjct: 368 RIELGPRDLEAGQLVVKNRTSEDKETLGRVDAVSSMDARL 407 >gi|260585028|ref|ZP_05852770.1| proline--tRNA ligase [Granulicatella elegans ATCC 700633] gi|260157224|gb|EEW92298.1| proline--tRNA ligase [Granulicatella elegans ATCC 700633] Length = 482 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/145 (22%), Positives = 70/145 (48%), Gaps = 3/145 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GTK++ + + + + S+G+ + R++ ++I + D +G+ Sbjct: 219 GKAVQAGTSHYMGTKFAEAFDIKYLTKENEHVHAHTTSWGV-STRLIGSLIMTHGDEQGL 277 Query: 339 IWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P VAP ++ LI + + + E++ +L G V DD G +F + Sbjct: 278 VLPPKVAPTQVVLIPVGPWKKNPAILEKLEELQQQLKAAGLRVKIDDTDNSPGFKFNEWE 337 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L G P+++ G + + +++V K R Sbjct: 338 LRGVPMRIECGPRDLENNQVMTKMR 362 >gi|157145991|ref|YP_001453310.1| threonyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895] gi|157083196|gb|ABV12874.1| hypothetical protein CKO_01745 [Citrobacter koseri ATCC BAA-895] Length = 622 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 84/411 (20%), Positives = 153/411 (37%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + + P + + A Y + L Sbjct: 412 ----EMWDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP ++A++ G + + M I G+M Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPSRLNASYVGENNERQVPVMIHRAILGSMER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 501 FIGILTEEFAG---FFPTWLAPVQVVVMNIT---DTQSEYVNELTQKLQNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R + + EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNEVI 605 >gi|14590578|ref|NP_142646.1| threonyl-tRNA synthetase [Pyrococcus horikoshii OT3] gi|8928366|sp|O58430|SYT_PYRHO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|3257107|dbj|BAA29790.1| 625aa long hypothetical threonyl-tRNA synthetase [Pyrococcus horikoshii OT3] Length = 625 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 75/332 (22%), Positives = 132/332 (39%), Gaps = 50/332 (15%) Query: 117 IFRSHIKSYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSY 174 I + + SYR+LP Y++ + FR E R G+ R R F M D ++ E +K + Sbjct: 304 ISKDAVISYRHLPLRMYELTRYSFRREKRGELSGLRRLRAFTMPDMHTLAKDLEQAKDEF 363 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 K F + + +GL + E + ++DF Sbjct: 364 KKQFKLSMEVLKGVGL----------------------TPEDYEVAIRFTEDFW-----K 396 Query: 235 ENTDF----DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 EN DF II ++E W + D+L + +S I+V + F Sbjct: 397 ENRDFIVELVKIIGKPVLIEMWKQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERF 456 Query: 291 GTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESS----HDGKGIIWPDSV 344 G KY +G++ Y + + GA+ RV+ A++E +GK + P + Sbjct: 457 GIKYY--------DENGEEKYPLILHCSPSGAIERVMYAILEKQAKLMQEGKKPMLPLWL 508 Query: 345 APFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 +P ++ +I + + D I +L V DD E++ + A+ P V Sbjct: 509 SPIQVRVIPV---SEEYLDYALYIAGKLEGARIRVDVDDEDERLNKKIRRAEKEWIPYIV 565 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +VG+K + ++ R G + + LEE+I Sbjct: 566 VVGAKEKESGTITVRRREDGKQYETRLEELIK 597 >gi|104774352|ref|YP_619332.1| threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423433|emb|CAI98306.1| Threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 643 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 86/413 (20%), Positives = 162/413 (39%), Gaps = 39/413 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 259 GLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D + M+ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + + + ++H + R LS+ D Sbjct: 379 TLNDGHTF-VALDQVQEEFARTLQIIMDVYHDFDINDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M S D + L+ + E A Y D+ + +L + Sbjct: 424 PKNTDKYFANDEMWERSQSMLKAAMDDMGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L ++ GADG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFEL----SYIGADGEEHRPVMIHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N+ AH D +K+ L G D E++G + Sbjct: 533 KGAFPTW---LAPVQAEIIPVNLDAH----SDYAKKVRDELVAKGFRAEIDFRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + P +++G ++ V ++ T + SL E + S +N Sbjct: 586 IRESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMGKLSKDVAN 638 >gi|322502963|emb|CBZ38047.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 788 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 4/134 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G WLP G + + + +R++ R G E+ P + S+ LW+ SG ++ Y Sbjct: 301 FHEVSPGSAFWLPHGTRIYNTLVEFLRKKYRRCGFQEVISPNMYSSKLWMVSGHWEKYAD 360 Query: 92 EML-RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M ++ D + P + +F S SY+ LP + + R+EL G+ Sbjct: 361 NMFCTKCEKEDFGL--KPMNCPGHCIMFASQPHSYKELPIRYADFGVLHRNELSGALTGL 418 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 419 TRVRRFQQDDAHIF 432 >gi|300863511|ref|ZP_07108463.1| threonyl-tRNA synthetase [Oscillatoria sp. PCC 6506] gi|300338467|emb|CBN53605.1| threonyl-tRNA synthetase [Oscillatoria sp. PCC 6506] Length = 608 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 8/166 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ W P G + +++EQ + G + + P + DL+ SG + Y ++M + Sbjct: 222 GLPLWTPKGTILRSILEDFLKQEQVKRGYLPVVTPHIGRVDLFKTSGHWQKYKEDMFPMM 281 Query: 97 -----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 + + ++ + P + I++S ++SYR LP + +R E G+ Sbjct: 282 AEDEESAKAEQGFVLKPMNCPFHIQIYKSELRSYRELPMRLAEFGTVYRYEQSGELGGLT 341 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R R F + D++ F +TPE + + L +F L LK+ R Sbjct: 342 RVRGFTVDDSHLF-VTPEQLDAEFLSVVDLILSVFKSLQLKNFKAR 386 >gi|260434317|ref|ZP_05788287.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8109] gi|260412191|gb|EEX05487.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8109] Length = 611 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 83/393 (21%), Positives = 150/393 (38%), Gaps = 45/393 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ G + P + LW SG D Y + M Sbjct: 229 GLVFWHPRGARMRLLIEEFWRQAHFEGGYELLYTPHVADISLWKTSGHLDFYAESMFGPM 288 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 + +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 289 EVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 347 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIV 212 DA+ F L PE K+ RI + + + P IG D + Sbjct: 348 TQDDAHVFCL-PEQISDEILKILDLTERILSSFDFSNYEINLSTRPEKSIGDDTVWD--- 403 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 LA G + K + I E A Y D+ K+ D++ Sbjct: 404 LATKGLIEALDRKGWA-----------------YKIDEGGGAFYGPKIDL---KIEDAIG 443 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIES 331 + S ++ F ++ L + ADG M I G++ ++ Sbjct: 444 RMWQCSTIQLD----FNLPERFDL----DYVAADGSKQRPIMIHRAIFGSLERFFGIMTE 495 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++ G W +AP ++ L+ + D+V + E++ +L+K G D G+++G Sbjct: 496 NYAGDYPFW---LAPEQVRLLPVT--DEV-QPYAEQVLDQLTKAGVRATIDRSGDRLGKL 549 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + P+ ++G+K + V ++ R G Sbjct: 550 IRTGEQIKIPVLAVIGAKEAEQNAVSLRSRRDG 582 >gi|21672408|ref|NP_660475.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|22654285|sp|P46244|SYT_BUCAP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21623017|gb|AAM67686.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 642 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 3/177 (1%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 +L + + S G+ W G + + +RE+ E+ P L +W +SG Sbjct: 250 LLNLYHMQKESPGMIFWHNNGWIIFNELEIFVREKLKEYKYKEVKTPLLIDKSIWQKSGH 309 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 +D+Y + + N + I P + IF +KSYR+LP + R+E Sbjct: 310 WDNYQDAIFTTSSENREYCI-KPMNCPGHVQIFNCGLKSYRDLPIRMAEFGSCHRNESSG 368 Query: 146 RF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 G+MR R F DA+ F T E ++ N ++ K I ++ + P Sbjct: 369 SLHGLMRIRNFTQDDAHIF-CTQEQLRYEINNCIKMIYDLYSTFNFKKILVKFSTRP 424 >gi|306820889|ref|ZP_07454509.1| threonine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551003|gb|EFM38974.1| threonine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 641 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 11/164 (6%) Query: 7 FLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E A++ H+ + L +H+ G + P G + + REE + Sbjct: 231 YLKLLEE----AKLRDHRKLGKELDLFSMHEEGPGFPFFHPKGMVLRNTLEKFWREEHEK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + + LW +SG +D Y + M D D A+ ++T +++H+ Sbjct: 287 AGYDEIKTPIILNEALWHQSGHWDHYKENMYFTKIDGEDYAIKPMNCPGSILT--YKTHL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDL 165 SYR+LP + ++ R EL G+MR R F DA+ + L Sbjct: 345 FSYRDLPLRWAEMGQVHRHELSGALHGLMRVRTFTQDDAHLYVL 388 Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust. Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 6/116 (5%) Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G++ ++ GK +W ++P ++ ++ I D+ D ++ + L K+G V Sbjct: 514 GSIERFIGILIEHFAGKFPLW---LSPVQVKILPIS--DKFI-DYAYEVQSELKKLGIRV 567 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + A L P +++G K V ++ + ++ R G M EEVI Sbjct: 568 NVDARAEKIGFKIREAQLEKVPYMLVIGEKEVENNTLSVRSRDLGDLGSMKKEEVI 623 >gi|290969075|ref|ZP_06560610.1| threonine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] gi|290781031|gb|EFD93624.1| threonine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] Length = 635 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 83/381 (21%), Positives = 148/381 (38%), Gaps = 59/381 (15%) Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E+ PT+ + LW +SG +D Y ++ + +++ P + +++S + SYR+ Sbjct: 291 EIMTPTILNRQLWEQSGHWDHY-RDNMYFTTIDEQPYAIKPMNCPGGILVYKSSVHSYRD 349 Query: 128 LPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 P ++ L R EL G+ R R F DA+ F + P K + + + + + Sbjct: 350 FPIRAAELGLVHRHELHGALHGLFRVRCFTQDDAHIF-MLPSQMKDEISGVMDLFDKAYK 408 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII--- 243 + GL E+ V T P ++ D+I Sbjct: 409 QFGL------------------EYHVELSTR---------------PEDSMGSDEIWESA 435 Query: 244 --SLNSIVEQWTAPYAATSD---VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP- 297 +L+ ++E+ PY + KL L K R + G I +P Sbjct: 436 TKTLHEVIEEKQVPYVINEGDGAFYGPKLDFHL---KDCLGRTWQCGTI---QLDMLMPE 489 Query: 298 -MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DG+ H V + G++ +I ++ G +W +AP +I + I Sbjct: 490 RFDVTYIGEDGQKHRPVMVHRACFGSIERFLGIITENYAGAFPVW---LAPVQIKFLPI- 545 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + Q+ E R K G V D E+IG + A + P IVG K ++ Sbjct: 546 SDKQLAY--AEDTARRFKKAGLRVEVDTSSEKIGYKIRKAQMEKVPYMAIVGDKEMAAGT 603 Query: 416 VEIKHRLTGIREDMSLEEVIN 436 + ++ R G + EEV++ Sbjct: 604 ISVRERTQGDIGVKAAEEVLH 624 >gi|218295277|ref|ZP_03496113.1| prolyl-tRNA synthetase [Thermus aquaticus Y51MC23] gi|218244480|gb|EED11005.1| prolyl-tRNA synthetase [Thermus aquaticus Y51MC23] Length = 477 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 86/435 (19%), Positives = 177/435 (40%), Gaps = 82/435 (18%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+++L ++Q+ AE+A + + T ++ + I+ + QK LD + +E ++ Sbjct: 15 SEWYLEVIQK----AELADYGPVRGTIVLRPYGYAIWENI---QKTLDQ---MFKETGHQ 64 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL----ADRNDKAMIYGPTHEEVMTDIFR 119 + +P + L E+ + + E+ + + ++ + PT E V+ ++ Sbjct: 65 NAYFPLFIPM---SFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWS 121 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 I+SYR+LP Q R ELR R +R+ EFL ++ ++ T E ++ +M Sbjct: 122 KWIQSYRDLPQLLNQWGNVVRWELRTR-PFLRTSEFLWQEGHTAHATREEAEAEVRRM-- 178 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L I+ +L ++D+ P+ Sbjct: 179 --LGIYAKL-----------------------------------ARDYAAIPV------- 194 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I L + E++ ++ + E + ++ G Y G ++ Sbjct: 195 --IEGLKTEKEKFAG-----------AVYTTTIEAMMRDGKALQSGTSHYLGENFARAFD 241 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAH 357 F+ D + YV S+G+ + R + A++ + D KG+I P +AP ++ ++ I + + Sbjct: 242 IKFQDRDLQVKYVHTTSWGL-SWRFIGAIVMTHGDDKGLILPPRLAPIQVVIVPIYREEN 300 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +A + L G DD + G +F +L G P +V +G K + + Sbjct: 301 REKVLEAAFALKKDLLARGLRAHLDDRDQYTPGYKFHEWELKGVPYRVELGPKDLEVGQA 360 Query: 417 EIKHRLTGIREDMSL 431 + RL G +E + L Sbjct: 361 VLASRLGG-KETLPL 374 >gi|322437350|ref|YP_004219562.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] gi|321165077|gb|ADW70782.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] Length = 687 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 86/414 (20%), Positives = 156/414 (37%), Gaps = 62/414 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +RE+ + G + P + +LW SG ++YG+ M Sbjct: 306 GLIFWHPKGGLIRKAMEDWMREDCIKRGYEMVFTPHIMRRELWKISGHEENYGENMYPPM 365 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +D P + I+++ KSYR+LP + ++ +R E G++R R F Sbjct: 366 ELDDAEYRLKPMNCPGHILIYKNSPKSYRDLPVRYAELGNVYRYERSGTMHGLLRVRGFT 425 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F TP G + E + Sbjct: 426 QDDAHIF-CTP------------------------------------GQIEDEVTACIEF 448 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK--LFDSLPEN 274 E+ V + F +F + D +D + S EQW + + K + ++P Sbjct: 449 AES-VLNTFGFHEFKVELSTWDPNDKKFIGS-AEQWGVAVGSLRNALERKGIPYKTIPGE 506 Query: 275 KRVSARGIEV------GHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GAM 322 I++ G ++ T ++LP +KG DG+ H M + G++ Sbjct: 507 AAFYGPKIDIKLVDVLGRMWQLSTVQFDWNLPARFDLHYKGEDGELHQPVMVHRALFGSV 566 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFW 381 V+ + G W +AP ++ L+ I + H + R + RL G V Sbjct: 567 ERFFGVLIEHYAGAFPFW---LAPVQVGLVPISEKHLEYAR----TVQQRLKDAGVRVEL 619 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ E++ ++ + P +I+G K +V ++ R G MS E + Sbjct: 620 DERNEKMNAKIREFGVNKVPFILIMGDKESQSDEVSVRTRGKGDGGAMSTEAFV 673 >gi|170721151|ref|YP_001748839.1| threonyl-tRNA synthetase [Pseudomonas putida W619] gi|229558042|sp|B1J6U4|SYT_PSEPW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169759154|gb|ACA72470.1| threonyl-tRNA synthetase [Pseudomonas putida W619] Length = 640 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 3/171 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q G E+ P + LW SG + +Y + Sbjct: 255 LQEEAPGMVFWHANGWTVYQVLEQYMRQVQRENGYSEIKTPQVVDRILWERSGHWSNYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTSSESRDYAV-KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 R R F+ DA+ F + K + + + ++ L ++ G + M+ + P Sbjct: 374 RVRGFVQDDAHIFCTEDQVKKEAADFIKLT-LDVYKDFGFTDVAMKLSTRP 423 >gi|150015183|ref|YP_001307437.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|149901648|gb|ABR32481.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 643 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 8/182 (4%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL L+E RD +L L T +G+ +P G K + + + +E+ + G Sbjct: 229 FLEALEEAKKRDHNKLGRELKLFT-TDENVGQGLPLLMPKGAKIVQLLQRWVEDEEEKRG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD--RNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +DL+ SG +D Y M L D ++D+ P I+ + Sbjct: 288 YLLTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDDEVFALRPMTCPFQYTIYNAEQH 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM--FVS 180 SYR+LP + + FR+E G++R R+F + D + +TPE + + + + Sbjct: 348 SYRDLPLRYGETSTLFRNEASGEMHGLIRVRQFTLADGH-LVVTPEQLEEEFKGVLELIQ 406 Query: 181 YL 182 YL Sbjct: 407 YL 408 >gi|126174365|ref|YP_001050514.1| threonyl-tRNA synthetase [Shewanella baltica OS155] gi|153000743|ref|YP_001366424.1| threonyl-tRNA synthetase [Shewanella baltica OS185] gi|217973356|ref|YP_002358107.1| threonyl-tRNA synthetase [Shewanella baltica OS223] gi|166225497|sp|A3D4I2|SYT_SHEB5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225498|sp|A6WNH2|SYT_SHEB8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783536|sp|B8EES6|SYT_SHEB2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|125997570|gb|ABN61645.1| threonyl-tRNA synthetase [Shewanella baltica OS155] gi|151365361|gb|ABS08361.1| threonyl-tRNA synthetase [Shewanella baltica OS185] gi|217498491|gb|ACK46684.1| threonyl-tRNA synthetase [Shewanella baltica OS223] Length = 642 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 81/397 (20%), Positives = 145/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR + N+ E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTDSQVQEEVSACIQMVYDTYATFGFENIVVKLSTRPEKRIGDDAM 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ Q + +P E + I L Sbjct: 434 WD---RAEEALKQALRDNNIEFTILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G+ +P +AP ++ ++NI D E++ + G +D Sbjct: 521 FLGILIEEYAGR---FPTWLAPMQVVVMNITDKQA---DYVEEVVKFFKEQGIRASFDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|326800360|ref|YP_004318179.1| threonyl-tRNA synthetase [Sphingobacterium sp. 21] gi|326551124|gb|ADZ79509.1| threonyl-tRNA synthetase [Sphingobacterium sp. 21] Length = 641 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 20/195 (10%) Query: 15 PRDAEIASHKLMLRTGMIHQHSK----------------GIYSWLPLGQKALDNVNAIIR 58 P+ +E+A + M+ H K G+ WLP G + ++ Sbjct: 223 PKASELADYLHMIEEAKKRDHRKLGKELELFAFSERVGMGLPLWLPKGAALRQKLVDFLQ 282 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTD 116 Q + G + P + +L+V SG Y+ YG + + + + + P + + Sbjct: 283 RAQMKAGYEPVVTPHIGHKNLYVTSGHYEKYGADSFQPIRTPQEGEEFLLKPMNCPHHCE 342 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+++ +SY++LP F + +R E G+ R R F DA+ F P+ K + Sbjct: 343 IYKTKPRSYKDLPVRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLF-CRPDQVKDEFK 401 Query: 176 KMFVSYLRIFHRLGL 190 K+ L +F LG Sbjct: 402 KVIDLVLYVFKALGF 416 >gi|302389916|ref|YP_003825737.1| histidyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] gi|302200544|gb|ADL08114.1| histidyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] Length = 423 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 101/449 (22%), Positives = 166/449 (36%), Gaps = 69/449 (15%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVES--GRYDS 88 M+ + +G LP + I RE + G E+ PT + +L+ D Sbjct: 1 MLTKAPRGTRDLLPEECTKWVFLENIFREICGQFGYREIRTPTFEHTELFQRGIGETTDI 60 Query: 89 YGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFG 148 KEM +D++ +++ P + + H + +P + I FR E RP+ G Sbjct: 61 VEKEMYTFSDKSGRSITLKPEGTAPVARAYIEHKLYNKPMPVKLFYITPCFRYE-RPQAG 119 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF--HRLGLKSIPMRAESGPIGGDL 206 R REF + F + GS + V L +F RLGL S+ +R S IG + Sbjct: 120 --RQREF-----HQFGIEAFGSPSPLIDVEVITLAVFFLKRLGLDSLEVRINS--IGCER 170 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI---ISLNSI-VEQWTAPYAATSDV 262 E K DF N+ D + N++ + P V Sbjct: 171 CREDY------------KKALEDFLFEKANSLCDTCKVRLGRNTLRILDCKDPGCQKLLV 218 Query: 263 HNEKLFDSLPENKR---------VSAR--------GIEVGHIFYFGTKYS-----LPMSA 300 + + L +N R +SA GI G +Y T + L + Sbjct: 219 EAPVILEYLCDNCRGHFDEVKKGLSALDVKYSVDPGIVRGLDYYTKTVFEIISKDLGAQS 278 Query: 301 TFKGADGKDHYVQ--------MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 T G DH V+ +GIG R++ + + G++ + P ++ + Sbjct: 279 TVCGGGRYDHLVEECGGPPTPAAGFGIGIERLIMVL-----EANGLL---DIPPIQMDVF 330 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 I D+ RD K+ RL G D +G + +Q AD + I+G V Sbjct: 331 -IAVLDETYRDYGLKLLYRLRMAGFSAETDYVGRSLKAQMKYADKIPSKYAFIIGEDEVK 389 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHR 441 + +K TG +E + EEV Y ++ Sbjct: 390 TGIITVKDLTTGEQEKVPCEEVETYLKNK 418 >gi|167465772|ref|ZP_02330861.1| threonine-tRNA ligase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 419 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 75/397 (18%), Positives = 155/397 (39%), Gaps = 47/397 (11%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I + + + G + P L + DL+ SG ++ Y ++M Sbjct: 33 QGLPLWLPNGATIRRTLERYIVDLEEKLGYQHVYTPVLANVDLYKTSGHWEHYREDMFPP 92 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P + ++++ + SYR+LP ++ R E+ G+ R R Sbjct: 93 MQLDNEELVLRPMNCPHHMMVYKNELHSYRDLPIRIAELGTMHRYEMSGALTGLHRVRAM 152 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F P+ K + ++ +++ G+ R LS+ D Sbjct: 153 TLNDAHIF-CRPDQIKEEFARVITLIRQVYADFGITDYRFR---------LSYR-----D 197 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY---AATSDVHNEKL----F 268 +T + D M + + L +VE+ PY + + KL Sbjct: 198 PQDTDKYFPNDEM-WEMSQR--------MLKEVVEELRLPYYEAEGEAAFYGPKLDVQIK 248 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 +L + + +S ++ F ++ L + G DG+ H + GI M + A Sbjct: 249 TALKKEETLSTAQLD----FLLPERFEL----EYVGEDGQKHRPVVIHRGIVSTMERMTA 300 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 + + G W + P + ++ + + D +++ RL + G V D E+ Sbjct: 301 FLLENFAGALPTW---LCPVQAKILPVSS---AFNDYAKEMEDRLKQAGIRVAADLRNEK 354 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +G + + L P ++VG ++ R G Sbjct: 355 LGYKIRESQLEKVPFMLVVGENEKQSGSFSVRRRGEG 391 >gi|203287850|ref|YP_002222865.1| prolyl-tRNA synthetase [Borrelia recurrentis A1] gi|201085070|gb|ACH94644.1| prolyl-tRNA synthetase [Borrelia recurrentis A1] Length = 491 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 24/193 (12%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G Y G ++ F+ +G+ YV S+G+ + R++ A+I D KG+I Sbjct: 223 KALQAGTSHYLGLNFAKAFDVKFQNKNGEMSYVFATSWGV-STRLIGALIMVHSDSKGLI 281 Query: 340 WPDSVAPFKISLINI-KAHDQVCRDACE---KIYARLSKVGCDVFWD-DMGEQIGSQFAV 394 P +AP +I ++ I K D V + E I+ L K V D D G +FA Sbjct: 282 LPPKIAPIEILIVPILKKDDDVNKKILEYATTIFDILVKEKFRVEIDKDFKNSPGFRFAA 341 Query: 395 ADLLGFPLQVIVGSKFV---------------SDSKVEIKHRLTGIREDMSLE--EVINY 437 ++ G P+++ +GS + S +V K L I+E++ E+ N Sbjct: 342 SEFKGIPIRIEIGSNDILMDCVTVARRDRDKNSKYQVSFKELLPKIKEELETMQCELFNK 401 Query: 438 A-SHRFSNNRPVL 449 A R SN + ++ Sbjct: 402 ALEFRNSNTKEII 414 >gi|167765976|ref|ZP_02438029.1| hypothetical protein CLOSS21_00467 [Clostridium sp. SS2/1] gi|167712333|gb|EDS22912.1| hypothetical protein CLOSS21_00467 [Clostridium sp. SS2/1] gi|291558770|emb|CBL37570.1| prolyl-tRNA synthetase, family I [butyrate-producing bacterium SSC/2] Length = 478 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ + D K YV S+G+ + R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFDIQYTDKDNKLQYVHQTSWGM-STRIIGAIIMVHGDDSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP + ++ I + D E+I RL V DD + G +F+ ++ Sbjct: 284 VLPPRIAPVQTMIVPIMQKKEGVLDKAEEIRKRLVS-SYKVKVDDSDKSPGWKFSEQEVR 342 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P ++ +G K + ++ I R T + +SL+E+ Sbjct: 343 GIPTRIEIGPKDIEKNQAVIVRRDTREKIIVSLDEI 378 >gi|146100812|ref|XP_001468953.1| threonyl-tRNA synthetase [Leishmania infantum] gi|134073322|emb|CAM72048.1| putative threonyl-tRNA synthetase [Leishmania infantum JPCM5] Length = 788 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 4/134 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G WLP G + + + +R++ R G E+ P + S+ LW+ SG ++ Y Sbjct: 301 FHEVSPGSAFWLPHGARIYNTLVEFLRKKYRRCGFQEVISPNMYSSKLWMVSGHWEKYAD 360 Query: 92 EMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M ++ D + P + +F S SY+ LP + + R+EL G+ Sbjct: 361 NMFCTKCEKEDFGL--KPMNCPGHCIMFASQPHSYKELPIRYADFGVLHRNELSGALTGL 418 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 419 TRVRRFQQDDAHIF 432 >gi|268316191|ref|YP_003289910.1| threonyl-tRNA synthetase [Rhodothermus marinus DSM 4252] gi|262333725|gb|ACY47522.1| threonyl-tRNA synthetase [Rhodothermus marinus DSM 4252] Length = 662 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 87/417 (20%), Positives = 144/417 (34%), Gaps = 62/417 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + +REEQ R G + P + +L+ SG Y Y Sbjct: 271 GLPLWLPRGATLRETLINFLREEQIRRGYQPVVTPHIARLELYKTSGHYPYYKDSQFPPM 330 Query: 98 DRN---DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 N + + P + I+ +SYR LP + +R E G+ R R Sbjct: 331 IENPETGEGYLLKPMNCPHHIMIYADRPRSYRELPLRLAEFGQVYRYEQTGELSGLTRVR 390 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F + DA+ F P+ K + + L +F LG + I L Sbjct: 391 GFTIDDAHIF-CRPDQVKDEFKNVIDLTLYVFRSLGFDEFEAQ--------------ISL 435 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + D E W A + E + E Sbjct: 436 RDPNNREKYVGDD-----------------------ELWEQAEQAIREAAAEMGLQATEE 472 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGI 319 + G + +G + GT Y LP + GAD + H V + Sbjct: 473 LGEAAFYGPKLDFMVRDALGRRWQLGTVQLDYILPERFDLYYIGADNQKHRPVMIHRAPF 532 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G++ V+ G +W +AP +++++ + D E + RL + G V Sbjct: 533 GSLERFIGVLIEHCAGNFPLW---LAPVQVAVLPLSDE---LNDYAEAVGRRLLEAGFRV 586 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E IG + A++ P +IVG + V ++ G + +L+E I Sbjct: 587 EVDTRTETIGYKIRQAEVQKIPYMLIVGRREREAGTVAVRKHGEGDQGPATLDEFIE 643 >gi|219110281|ref|XP_002176892.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411427|gb|EEC51355.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 671 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/325 (20%), Positives = 129/325 (39%), Gaps = 68/325 (20%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 +I PT E ++ +FR I S+R+LP Q R E+R R +R+ EFL ++ ++ Sbjct: 281 LIVRPTSETMIWYMFRKWIVSHRDLPLKINQWANVMRWEMRTR-PFLRTSEFLWQEGHTA 339 Query: 164 DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 T +G+ M +Y C Sbjct: 340 HATRDGAIADAQAMLDNY--------------------------------------ATLC 361 Query: 224 SKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 +D + P+ + + S E+ +A D + ++L +N ++ Sbjct: 362 -EDLLAMPV---------VRGVKSPSER----FAGAEDTYT---IEALMQN----GWALQ 400 Query: 284 VGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDS 343 G + G + + TF+ +G V S+G + R++ A+I + D G++ P Sbjct: 401 SGTSHFLGQSFGKAFNVTFQDENGTQQDVWGTSWG-ASTRLIGALIMTHSDDAGLVLPPK 459 Query: 344 VAPFKISLINI--KAHDQVCRDACE----KIYARLSKVGCDVFWDDMG-EQIGSQFAVAD 396 VAP ++ ++ I K D + A + ++ A L G DD + G++F + Sbjct: 460 VAPAQVIIVPIPPKKDDAETKQAMDIAMNQLTASLKAEGLRFKVDDRDFVRSGAKFFEWE 519 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 G PL++ +G + V ++ K+R Sbjct: 520 RKGVPLRIEIGPRDVRNNVCVFKYR 544 >gi|310641589|ref|YP_003946347.1| prolyl-tRNA synthetase [Paenibacillus polymyxa SC2] gi|309246539|gb|ADO56106.1| Prolyl-tRNA synthetase [Paenibacillus polymyxa SC2] Length = 482 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 80/164 (48%), Gaps = 10/164 (6%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y GT +++ + + + S+G + R++ A+I D +G+ Sbjct: 225 GRAVQAGTSHYMGTNFAVAFDIKYLSRENNLEFAHTTSWGT-STRLIGALIMVHGDDRGL 283 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAV 394 P VAP ++ ++ I K D V A ++++A L + G V DD + G +F Sbjct: 284 ALPPKVAPTQVIMVPIGPPKKRDAVIARA-DELFAELKQAGVRVKMDDRSDVSPGWKFNE 342 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEV 434 ++ G P+++ +G + + + + R++G +++D LEEV Sbjct: 343 YEMRGVPVRLEIGPRDMENGVCVLVSRISGEKKIVQQDNLLEEV 386 >gi|239993779|ref|ZP_04714303.1| threonyl-tRNA synthetase [Alteromonas macleodii ATCC 27126] Length = 638 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 89/423 (21%), Positives = 150/423 (35%), Gaps = 64/423 (15%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W G + + +R++ G E+ P + LW +SG +D Y + Sbjct: 257 QEEAPGMVFWHNDGWSIYTELESYVRKKLREYGYDEVKGPLMMDRSLWEKSGHWDKYAEN 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + IF +KSYR+LP + R+E G+MR Sbjct: 317 MF-TTESEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALHGLMR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F T E + + G ++I ++ + P E Sbjct: 376 VRGFTQDDAHIF-CTEEQILEEVSGCIKMVYETYAAFGFENIKVKLSTRP-------EKR 427 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDV--HNEKLFD 269 V AD E W AA +D N+ FD Sbjct: 428 VGAD----------------------------------EIWDKSEAALADALKANDIEFD 453 Query: 270 SLPENKRVSARGIE------VGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYG 318 P IE + + GT +S+P + +T+ DG+ M Sbjct: 454 YQPGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRA 513 Query: 319 I-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 I G++ ++ G +W +AP ++ ++NI C K +L ++G Sbjct: 514 ILGSLERFIGILTEEFAGFFPLW---LAPQQVVVMNITDKQAEYASDCVK---KLQELGF 567 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D E+IG + L P ++VG K + +V ++ R M LE+ I Sbjct: 568 RAKSDLRNEKIGFKIREHTLKRIPYMLVVGDKEMEAGEVAVRSRRGDDLGKMRLEDFIAM 627 Query: 438 ASH 440 A Sbjct: 628 AQQ 630 >gi|188533977|ref|YP_001907774.1| threonyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] gi|238689736|sp|B2VEM1|SYT_ERWT9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|188029019|emb|CAO96887.1| Threonyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] Length = 642 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 92/442 (20%), Positives = 159/442 (35%), Gaps = 56/442 (12%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + Y L + + RD +L L + + + G+ W G + +R + Sbjct: 230 AAYLLRLEEAAKRDHRKIGKQLDLYH--MQEEAPGMVFWHNDGWTIFRELEVFVRTKLKE 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW ++G +++Y + M + N + I P + IF +K Sbjct: 288 YEYQEVKGPFMMDRVLWEKTGHWENYKEAMFTTSSENREYCI-KPMNCPGHVQIFNQGLK 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F T E + N Sbjct: 347 SYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVY 405 Query: 183 RIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSEN 236 ++ G + I ++ + P IG D L D E + + P P E Sbjct: 406 DMYSTFGFEKIVVKLSTRPEKRIGSD------DLWDRSEADLAAALKENGIPFEYQPGEG 459 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + I L D L R + G + +SL Sbjct: 460 AFYGPKIEFT--------------------LHDCLD-------RAWQCGTV---QLDFSL 489 Query: 297 P--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 P +SA++ G + M I G+M ++ + G +P +AP ++ ++N Sbjct: 490 PGRLSASYVGESNERQVPVMIHRAILGSMERFIGILTEEYAG---FFPTWLAPVQVVVMN 546 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I + ++ +L G D E+IG + L P ++ G K V Sbjct: 547 ITDGQS---EYVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEA 603 Query: 414 SKVEIKHRLTGIREDMSLEEVI 435 KV ++ R + + EVI Sbjct: 604 GKVAVRTRRGKDLGSIDVNEVI 625 >gi|229060032|ref|ZP_04197403.1| Threonyl-tRNA synthetase [Bacillus cereus AH603] gi|228719251|gb|EEL70859.1| Threonyl-tRNA synthetase [Bacillus cereus AH603] Length = 639 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +R QN E+ P + + +LW +SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLRGIQNEYNYQEVRTPFMMNQELWEKSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ + K+ P + +F+ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDHKSFALKPMNCPGHMLMFKYKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|72547539|ref|XP_843247.1| threonyl-tRNA synthetase [Leishmania major strain Friedlin] gi|323363762|emb|CBZ12768.1| putative threonyl-tRNA synthetase [Leishmania major strain Friedlin] Length = 787 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 4/134 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G WLP G + + + +R++ R G E+ P + S+ LW+ SG ++ Y Sbjct: 300 FHEVSPGSAFWLPHGARIYNTLVEFLRKKYRRCGFQEVISPNMYSSKLWMVSGHWEKYAD 359 Query: 92 EML-RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M ++ D + P + +F S SY+ LP + + R+EL G+ Sbjct: 360 SMFCTKCEKEDFGL--KPMNCPGHCIMFASQPHSYKELPIRYADFGVLHRNELSGALTGL 417 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 418 TRVRRFQQDDAHIF 431 >gi|228939521|ref|ZP_04102109.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972374|ref|ZP_04132985.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978988|ref|ZP_04139352.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228780699|gb|EEM28913.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228787391|gb|EEM35359.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820221|gb|EEM66258.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326940068|gb|AEA15964.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 640 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W +SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWEKSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|312879303|ref|ZP_07739103.1| prolyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] gi|310782594|gb|EFQ22992.1| prolyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] Length = 501 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 65/339 (19%), Positives = 135/339 (39%), Gaps = 74/339 (21%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E V+ ++ ++S+R+LP Q R E RPR +R+ EFL ++ Sbjct: 123 EEPLVVRPTSETVIGHMYSKWVQSWRDLPLLINQWCSVMRWEKRPRL-FLRTSEFLWQEG 181 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 + T ++ + ++ L ++ R+ ++ + + +V + E + Sbjct: 182 H----TAHATRDEAMEETLTMLEVYRRIMVEELALP--------------VVAGEKSEGE 223 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F D+ + +++ A A TS + A+ Sbjct: 224 RFPGA--------------DNTFTCEAMMSDKKALQAGTSHFLGQNF-----------AK 258 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 E+ F+ DG+ + S+G+ + R++ A+I + D G++ Sbjct: 259 AFEIA----------------FQDQDGQVQFAWTTSWGV-STRLIGALIMTHADDDGLVL 301 Query: 341 PDSVAPFKISLINIKAHDQ--------VCRDACEKIYARLSK--VGCDVFWDDMGEQIGS 390 P VAP K++L+ I ++ R+ + ARL + V D + + G Sbjct: 302 PPHVAPVKVALLPISTDEERLASDLEPKARELVTALEARLGRRSVALDTQYH---MRPGD 358 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +F G PL++ +G + + +V R TG + D+ Sbjct: 359 RFFSHLQKGVPLRLELGEREWQEGRVRAVRRDTGEKIDL 397 >gi|304408774|ref|ZP_07390395.1| threonyl-tRNA synthetase [Shewanella baltica OS183] gi|307302777|ref|ZP_07582532.1| threonyl-tRNA synthetase [Shewanella baltica BA175] gi|304352595|gb|EFM16992.1| threonyl-tRNA synthetase [Shewanella baltica OS183] gi|306913137|gb|EFN43559.1| threonyl-tRNA synthetase [Shewanella baltica BA175] Length = 642 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 81/397 (20%), Positives = 145/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR + N+ E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTDSQVQEEVSACIQMVYDTYATFGFENIVVKLSTRPEKRIGDDAM 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ Q + +P E + I L Sbjct: 434 WD---RAEEALKQALRDNNIEFTILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G+ +P +AP ++ ++NI D E++ + G +D Sbjct: 521 FLGILIEEYAGR---FPTWLAPMQVVVMNITDKQA---DYVEEVVKFFKEQGIRASFDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|225010590|ref|ZP_03701061.1| prolyl-tRNA synthetase [Flavobacteria bacterium MS024-3C] gi|225005419|gb|EEG43370.1| prolyl-tRNA synthetase [Flavobacteria bacterium MS024-3C] Length = 491 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 83/164 (50%), Gaps = 9/164 (5%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ T+ +GK +V S+G+ + R++ A+I + D G++ Sbjct: 234 KALQAGTSHFLGQNFAKAFDVTYATKEGKQAHVWATSWGV-STRLMGALIMTHSDDNGLV 292 Query: 340 WPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKV----GCDVFWDDM-GEQIGSQFA 393 P +AP ++ ++ I K DQ+ DA + A L K G V +D + G +F Sbjct: 293 LPPKLAPIQVVIVPIYKGTDQL--DAIAEKVAPLVKALKSKGISVKFDQRDTHKPGFKFN 350 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++ +G + + ++ E+ R T +E ++ + ++ + Sbjct: 351 EYELKGVPIRLAIGQRDLDNNTFEVARRDTLTKETVASDHLVEH 394 Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ D +R I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 115 EEELIVRPTSETIIWDTYRKWIQSYRDLPLLINQWANVVRWEMRTRL-FLRTSEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T E + +M Y Sbjct: 174 HTAHATKEEAIAEAEQMMEVY 194 >gi|203284314|ref|YP_002222054.1| prolyl-tRNA synthetase [Borrelia duttonii Ly] gi|201083757|gb|ACH93348.1| prolyl-tRNA synthetase [Borrelia duttonii Ly] Length = 491 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 24/193 (12%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G Y G ++ F+ +G+ YV S+G+ + R++ A+I D KG+I Sbjct: 223 KALQAGTSHYLGLNFAKAFDVKFQNKNGEMSYVFATSWGV-STRLIGALIMVHSDSKGLI 281 Query: 340 WPDSVAPFKISLINI-KAHDQVCRDACE---KIYARLSKVGCDVFWD-DMGEQIGSQFAV 394 P +AP +I ++ I K D V + E I+ L K V D D G +FA Sbjct: 282 LPPKIAPIEILIVPIFKKDDDVNKKILEYATTIFDILVKEKFRVEIDKDFKNSPGFRFAA 341 Query: 395 ADLLGFPLQVIVGSKFV---------------SDSKVEIKHRLTGIREDMSLE--EVINY 437 ++ G P+++ +GS + S +V K L I+E++ E+ N Sbjct: 342 SEFKGIPIRIEIGSNDILMDCVTVARRDRDKNSKYQVSFKELLPKIKEELETMQCELFNK 401 Query: 438 A-SHRFSNNRPVL 449 A R SN + ++ Sbjct: 402 ALEFRNSNTKEII 414 >gi|113475159|ref|YP_721220.1| threonyl-tRNA synthetase [Trichodesmium erythraeum IMS101] gi|110166207|gb|ABG50747.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Trichodesmium erythraeum IMS101] Length = 608 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 8/166 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G +++ +++EQ + G + + P + DL+ SG + Y ++M + Sbjct: 222 GLPLWTPKGTMLKNSLKDFLQQEQLKRGYLPVDTPHIARIDLFKTSGHWQKYKEDMFPMM 281 Query: 98 DRNDKA------MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +++A + P + I+++ ++SYR LP + +R E G+ Sbjct: 282 AEDEQAEALEQGFVLKPMNCPFHIQIYKNELRSYRELPIRLAEFGTVYRHEKSGELGGLT 341 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R R F D++ F +TPE + + L +F L L++ R Sbjct: 342 RVRGFTQDDSHLF-VTPEQLDAEFLSVVDLTLFVFKSLQLQNFKAR 386 >gi|160875442|ref|YP_001554758.1| threonyl-tRNA synthetase [Shewanella baltica OS195] gi|189083621|sp|A9L2Q9|SYT_SHEB9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160860964|gb|ABX49498.1| threonyl-tRNA synthetase [Shewanella baltica OS195] gi|315267632|gb|ADT94485.1| threonyl-tRNA synthetase [Shewanella baltica OS678] Length = 642 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 81/397 (20%), Positives = 145/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR + N+ E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTDSQVQEEVSACIQMVYDTYATFGFENIVVKLSTRPEKRIGDDAM 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ Q + +P E + I L Sbjct: 434 WD---RAEEALKQALRDNNIEFTILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G+ +P +AP ++ ++NI D E++ + G +D Sbjct: 521 FLGILIEEYAGR---FPTWLAPMQVVVMNITDKQA---DYVEEVVKFFKEQGIRASFDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|113867357|ref|YP_725846.1| threonyl-tRNA synthetase [Ralstonia eutropha H16] gi|123134164|sp|Q0KBZ3|SYT_RALEH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|113526133|emb|CAJ92478.1| Threonyl-tRNA synthetase [Ralstonia eutropha H16] Length = 635 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 16/233 (6%) Query: 7 FLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + +T + H + + G+ W P G + V +R Sbjct: 231 YLHMLEE----AEKRDHRKLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW +SG + +Y KE + + + + P + IF ++ Sbjct: 287 AGYDEVRTPQVMDRSLWEKSGHWQNY-KENMFVTESEKRDYAIKPMNCPGHVQIFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVS 180 SYR+LP + R+E G+MR R F+ DA+ F + ++N++ S Sbjct: 346 SYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEAKAFNELAFS 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF--CSKDFMDFP 231 ++ G K + ++ P S E A+ G C D+ + P Sbjct: 406 ---VYDDFGFKDVKVKLSLRPDQRAGSDEIWDHAEEGLRLALRACGVDWEELP 455 >gi|225387532|ref|ZP_03757296.1| hypothetical protein CLOSTASPAR_01285 [Clostridium asparagiforme DSM 15981] gi|225046368|gb|EEG56614.1| hypothetical protein CLOSTASPAR_01285 [Clostridium asparagiforme DSM 15981] Length = 584 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 95/414 (22%), Positives = 152/414 (36%), Gaps = 51/414 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M G +LP G + + RE R G E+S P + S LW SG +D Y Sbjct: 203 MFADEGPGFPFFLPKGMTLKNTLIDYWREIHLREGYQEVSTPIILSRKLWENSGHWDHYK 262 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M + D D A+ P + ++++ SYR LP ++ L R E + G Sbjct: 263 DNMYTTVIDEEDFAV--KPMNCPGGMLVYKNTPHSYRELPLRVGELGLVHRHEKSGQLHG 320 Query: 149 VMRSREFLMKDAYSF--DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 +MR R F DA+ F D E ++ F + R E +G D Sbjct: 321 LMRVRCFTQDDAHIFMRDDQIEDEIKGVTRLINEVYSQFGFEYFVELSTRPEDS-MGSDE 379 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E +A G + E+ D I++ E A Y D H Sbjct: 380 DWE---MATNGLRKAL------------EDMGLDYIVN-----EGDGAFYGPKIDFH--- 416 Query: 267 LFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAM 322 L DSL R + G I F ++ L +A DG K + + G++ Sbjct: 417 LRDSL-------GRTWQCGTIQLDFQMPQRFDLEYTA----EDGNKKRPIMIHRVCFGSI 465 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ GK +W +AP ++ +I + + D +Y +L G D Sbjct: 466 ERFIGILIEHFAGKFPVW---LAPVQVKVIPVS---EKSMDYATGVYEKLKAAGIRTELD 519 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E++G + A L P +++G K ++ + ++ R G LE I Sbjct: 520 HKDEKVGYKIRQAQLEKVPFMLVLGEKEAAEGAITVRSRDKGDLGAAQLEAFIG 573 >gi|289668713|ref|ZP_06489788.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 634 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 77/394 (19%), Positives = 142/394 (36%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 256 LQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 316 AMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F L + + L ++ G I ++ P +G D + Sbjct: 375 RVRGFTQDDGHVFCLESQ-IESEVTAFHQQALAVYTAFGFDDIQIKIALRPEKRLGDDAT 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A V C ++ + P A Y + H L Sbjct: 434 WDKAEAALRSALGV-CGVEWQELPGEG-------------------AFYGPKIEYH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 471 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G +P +AP ++ ++NI D+ K L+ G V D E+ Sbjct: 524 ILIEHHAGA---FPSWLAPVQVVVVNITDAQAEYVDSVRKT---LANQGFRVSADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++VG + + V ++ R Sbjct: 578 IGYKIREHTLQRVPYLLVVGDREKENGAVAVRTR 611 >gi|254522893|ref|ZP_05134948.1| threonyl-tRNA synthetase [Stenotrophomonas sp. SKA14] gi|219720484|gb|EED39009.1| threonyl-tRNA synthetase [Stenotrophomonas sp. SKA14] Length = 633 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 79/409 (19%), Positives = 146/409 (35%), Gaps = 42/409 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +TG E+ P + LW +SG +D+Y Sbjct: 256 LQEEAPGLVFWHPKGWALWQVVEQYMRKVYRKTGYGEVRCPQILDVSLWQKSGHWDNYQD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 316 AMF-FTESEKRTYALKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F T + L ++ G I ++ P +G D + Sbjct: 375 RVRGFTQDDGHVF-CTENQVEAEVTAFHQQALAVYQHFGFDEIQVKIALRPESRLGDDAT 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ S +P E A Y + H L Sbjct: 434 WD---KAEGALRSALSSNGVEWQELPGEG-----------------AFYGPKIEYH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 471 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFLG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G+ +P +AP ++ + NI + + L++ G V D E+ Sbjct: 524 ILIEHHAGQ---FPAWLAPTQVVVANIT---DAQAEYVSGVTKTLAEQGFRVSSDLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 IG + L P +++G + + V ++ R MSL+ I Sbjct: 578 IGYKIREHTLQRVPYLLVIGDREKENGAVAVRTRSGEDLGSMSLQAFIE 626 >gi|300120854|emb|CBK21096.2| unnamed protein product [Blastocystis hominis] Length = 767 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 91/414 (21%), Positives = 156/414 (37%), Gaps = 55/414 (13%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G +LP G + + IR E + G E+ P + + +LW SG Y Sbjct: 387 HELSPGSCFFLPKGAYIYNKLIEFIRHEYHERGYTEVVSPNVYNLELWNISGHASHYRDS 446 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M L + +D P + +F+ + SYR LP F + R+EL G+ R Sbjct: 447 MF-LFNCDDTEYGLKPMNCPGHCLMFKHAMHSYRELPIRFADFGVLHRNELSGALNGLTR 505 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEF 210 R F DA+ F P+ K + + ++ G+ ++ + GDL+ Sbjct: 506 VRRFQQDDAHIF-CRPDQIKQEVSGVLDFMRHVYGIFGMSFNLELSTRPKKAMGDLA--- 561 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ--WT------APYAATSDV 262 L E + SLN + + W A Y D+ Sbjct: 562 --LWQQAEASL--------------------TESLNEFIGEGNWKVNPGDGAFYGPKIDI 599 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK-DHYVQMGSYGIGA 321 K+ D+L + + ++ F ++ L +K ADG + V + +G+ Sbjct: 600 ---KVMDALHRVHQTATIQLD----FQLPIRFEL----EYKKADGSMERPVMVHRAILGS 648 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + A++ GK WP ++P + +I + A C + +K+ RL Sbjct: 649 VERSFAILLEHFKGK---WPFWLSPRQAIVIPVNA---TCMEYAQKVRQRLWDNYFQAEV 702 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD G + A L F ++VG+K V I+ R I +++E I Sbjct: 703 DDTGRTLNKMVREAQLAQFNYILVVGNKEAETDTVTIRSRSNEIIGTKTVDECI 756 >gi|261250893|ref|ZP_05943467.1| threonyl-tRNA synthetase [Vibrio orientalis CIP 102891] gi|260937766|gb|EEX93754.1| threonyl-tRNA synthetase [Vibrio orientalis CIP 102891] Length = 642 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ +RE+ G E+ P + LW SG +D Y + Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFVREKLTEYGYQEVKGPLIMDRVLWERSGHWDKYAE 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSEN-REYALKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 376 RVRGFTQDDAHIF 388 >gi|325295461|ref|YP_004281975.1| threonyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065909|gb|ADY73916.1| threonyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 658 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 99/468 (21%), Positives = 178/468 (38%), Gaps = 85/468 (18%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y + + RD + +L L + + + G+ W P G + + +E + Sbjct: 230 EEYLHRLEEAKKRDHRVLGKQLDLFS-IYEEAGSGLVFWHPNGAIIRREIEEWVEKEHEK 288 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEML-----------RLADRN--------DKAM 104 G + P + ADLW SG YD Y + M +L + ++A Sbjct: 289 RGYQRIYTPHIMKADLWKISGHYDFYKENMFFVPVVEHDEEEKLGNEKVPLTCEEVERAN 348 Query: 105 IYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAY 161 Y P + I++S +SY++LP F++ R E G++R R F D + Sbjct: 349 WYAVKPMNCPGHILIYKSQPRSYKDLPLRFFEFGTVHRYEKSGSLHGLLRVRGFTQDDGH 408 Query: 162 SFDLTPEGSKHS------YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD--LSHEFIVL 213 F P+ K Y +S ++ + + + + P + IG D H L Sbjct: 409 IF-CRPDQLKDEILGVLDYVMELLSVFKLDYVINIGTKPEKY----IGSDEAWEHATQAL 463 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDF----DDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 D + +++ I + F DI L++I +W P Sbjct: 464 IDA------LKERGLEYNIVEGDGAFYGPKIDIAVLDAIGRKWDGPTIQVD--------F 509 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 +LPE ++ ++ G K M H MGS R + +I Sbjct: 510 NLPER-------FDLTYVDRDGEKKRPVMV----------HRAIMGS----IERFIGLLI 548 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 E ++P +AP ++ +I + D+ + E ++ +L +VG DD ++G Sbjct: 549 EHYAG----LFPLWLAPTQVVVIPVS--DKYI-NYAENVFRKLKEVGIRAKLDDESGKVG 601 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 + A+LL P VIVG K + V ++ + G D+ E+ N+ Sbjct: 602 YKIRKAELLKIPYMVIVGEKEQESNTVSVRSKKEG---DLGSMEISNF 646 >gi|300772848|ref|ZP_07082717.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] gi|300759019|gb|EFK55846.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] Length = 641 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 81/413 (19%), Positives = 151/413 (36%), Gaps = 61/413 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + ++ Q + G + P + L+V SG Y+ YG++ + Sbjct: 262 GLPLWLPKGAALRQKLIDFMQRAQLKAGYEPVVTPHIGHKQLYVTSGHYEKYGEDSFQPI 321 Query: 98 DR--NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + P + +I+++ +SY++LP F + +R E G+ R R Sbjct: 322 KTPVEGEEFFLKPMNCPHHCEIYKTKPRSYKDLPVRFAEFGTVYRYEQSGELHGLTRVRG 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F P+ K + K+ L +F LG + + + L Sbjct: 382 FTQDDAHLF-CRPDQVKEEFKKVIDLVLYVFGALGFEDYIAQ--------------VSLR 426 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D + D E W A + +EK ++ E Sbjct: 427 DPENRTKYIGSD-----------------------ENWALAERAIIEAADEKGLPTVVEY 463 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 + G + +G + GT Y+LP + G+D H V + G Sbjct: 464 GEAAFYGPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNAKHRPVMIHRAPFG 523 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ AV+ G+ +W +AP + ++ + + + +K+ L+ Sbjct: 524 SLERFIAVLIEHCAGRFPLW---LAPEQFIVLPV---SEKYEEYAQKLLESLNNSDIRGL 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 D E++G + A++ P +IVG K V ++ +G M+ EE Sbjct: 578 IDLRDEKVGRKIRDAEVKKLPYMLIVGEKEAESGTVSVRKHGSGDVGSMTPEE 630 >gi|255019144|ref|ZP_05291270.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL F2-515] Length = 182 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 3/171 (1%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD +L L T I + +G+ WLP G + I +++ R G + P + Sbjct: 6 RDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMA 64 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + +L+ SG +D Y ++M +++ ++ P + I+++ I SYR LP ++ Sbjct: 65 NVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSYRELPIRIAEL 124 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 + R E+ G+ R R + DA+ F + P+ K + ++ L ++ Sbjct: 125 GMMHRYEMSGALSGLQRVRGMTLNDAHVF-VRPDQIKDEFKRVVELILEVY 174 >gi|269836488|ref|YP_003318716.1| threonyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] gi|269785751|gb|ACZ37894.1| threonyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] Length = 596 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 96/413 (23%), Positives = 157/413 (38%), Gaps = 58/413 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + EE G + P + S D++ +SG ++Y + M Sbjct: 214 GLILWHPKGAMIRHLIERFETEEHLARGYQLVYTPHIASGDIYRKSGHLETYQENMYSPM 273 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D P + I+ S ++SYR+LP ++ +R E G++R R F Sbjct: 274 DIEGAPYYLKPMNCPGHIMIYNSQVRSYRDLPIRLAELGTVYRYERSGTLHGMLRVRGFT 333 Query: 157 MKDAYSFDLTPEGSKHSYNKMF---VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 DA+ F P+ + + + + R+F + R E IG D + E Sbjct: 334 QDDAHIF-CRPDQLEDEIKGVLDLALYFARVFGYEYEAFLATRPEKS-IGSDENWE---- 387 Query: 214 ADTGETQVFCSKDFMDFPI---PSENTDFD---DIISLNSIVEQWTAPYAATSDVHNEKL 267 ET ++ M P P + DI L+S+ +WT P Sbjct: 388 -RATETLANALRN-MGIPYEIDPGAGAFYGPKIDIKFLDSLGREWTGPTIQVD------- 438 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAM-RVV 325 +LPE AT+ G DG+ H V M + G+M R V Sbjct: 439 -FNLPER-----------------------FDATYVGEDGERHRVVMVHRTVLGSMERFV 474 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 +IE + G +W +AP + +I I D+ A E + ARL + V +D Sbjct: 475 GGLIE-HYAGAFPVW---LAPVQAEVIPIA--DRHVPYAHE-VAARLKEADLRVEVNDSN 527 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 +++ ++ A L P ++VG K V ++ R M ++E I A Sbjct: 528 DRMQAKIRRAQLQRIPYMLVVGDKEAEAGTVAVRLRTNENLGAMPVDEFIALA 580 >gi|221217966|ref|ZP_03589433.1| threonyl-tRNA synthetase [Borrelia burgdorferi 72a] gi|224533347|ref|ZP_03673941.1| threonyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] gi|225549973|ref|ZP_03770934.1| threonyl-tRNA synthetase [Borrelia burgdorferi 118a] gi|221192272|gb|EEE18492.1| threonyl-tRNA synthetase [Borrelia burgdorferi 72a] gi|224513512|gb|EEF83869.1| threonyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] gi|225369432|gb|EEG98884.1| threonyl-tRNA synthetase [Borrelia burgdorferi 118a] Length = 581 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 78/409 (19%), Positives = 157/409 (38%), Gaps = 51/409 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG D Y M Sbjct: 205 GLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 265 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGMMRARGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHE--FI 211 DA+ T ++ + ++ + G + + P +G D E Sbjct: 325 QDDAHII-CTHSQVLDEIKEVLRFAIYMWSKFGFSNPKAYLSTKPDKSVGNDSDWEMSLK 383 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 VL +T DF +P E I + A Y D+ K+ DSL Sbjct: 384 VLEET----------LSDFEVPYE------------IDKGGGAFYGPKIDL---KIVDSL 418 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAV 328 ++S + ++LP + T+ DGK+ M +G++ + Sbjct: 419 EREWQMSTIQFD----------FNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGI 468 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + G +W ++P ++ +I + + + D K++ + G + D+ ++ Sbjct: 469 LVEHYGGAFPLW---LSPVQVVIIPV---NNIVEDYAIKVFNKFKNEGIRIKLDNSSSRM 522 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ P I+G + + ++ I+ R M L+E + + Sbjct: 523 NAKIREYQAKKIPYMFIIGEREAIEERISIRTRTNEQINGMKLDEALKF 571 >gi|27904622|ref|NP_777748.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29839437|sp|P59554|SYT_BUCBP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|27904019|gb|AAO26853.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 643 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 14/180 (7%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GMI H G W+ + +IR + + E+ P + + +W +SG D+Y Sbjct: 263 GMIFWHRNG---WI-----VFQELKKLIRVKLRKYNYQEVKTPVMMNKKIWKDSGHLDNY 314 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M + N + I P + IF ++SYR+LP + R+E G Sbjct: 315 KESMFMVCSSNFEYGI-KPMNCPGHVQIFNHVVRSYRDLPIRISEFGSCHRNEPSGALHG 373 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 +MR R F DA+ F + N + + Y I+ G K I +R + P IG D Sbjct: 374 LMRIRNFTQDDAHIFCREDQICSEVSNCIRMVY-EIYKIFGFKKILVRLSTRPKNRIGND 432 >gi|89900130|ref|YP_522601.1| threonyl-tRNA synthetase [Rhodoferax ferrireducens T118] gi|89344867|gb|ABD69070.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodoferax ferrireducens T118] Length = 669 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I H+ G+ W P G V +R+ G E+ P + LW ++G +D Y + Sbjct: 283 IDDHAPGLVFWHPKGWTLWQGVEQYMRQVYRDNGYQEVKGPQILDKSLWEKTGHWDKY-R 341 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + P + IF+ IKSYR+LP + + R+E G+M Sbjct: 342 ENMFTTESEKREYALKPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPSGGLHGIM 401 Query: 151 RSREFLMKDAYSF 163 R R F D + F Sbjct: 402 RVRGFTQDDGHIF 414 >gi|114319929|ref|YP_741612.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Alkalilimnicola ehrlichii MLHE-1] gi|122312208|sp|Q0AAL5|SYT_ALHEH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114226323|gb|ABI56122.1| Ser-tRNA(Thr) hydrolase [Alkalilimnicola ehrlichii MLHE-1] Length = 641 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 86/415 (20%), Positives = 154/415 (37%), Gaps = 51/415 (12%) Query: 17 DAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + R + + + G+ W P G + V IR G E+ P Sbjct: 237 EAEKRDHRRIGRAQNLFHLQEEAPGMAFWHPKGWQIYLEVQEYIRRLTRGHGYQEIHTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 L LW +SG +D + M + + + P + ++ +KSYR+LP Sbjct: 297 LVDRSLWEKSGHWDKFQDNMF-ITESESRDYAVKPMNCPCHVQVYNQGLKSYRDLPLRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F+ DA+ F T + + + ++ G Sbjct: 356 EFGSCHRNEPSGTLHGLMRVRNFVQDDAHIF-CTEDQIQQEVADFIDLVFKAYNDFGFDD 414 Query: 193 IPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P +G D L D E + +LN Sbjct: 415 VIIALSTRPDERVGED------ALWDKAEHALEE--------------------ALNRAG 448 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG 307 +W + K+ +L K R ++G I +S+P + AT+ DG Sbjct: 449 LEWQL-QPGEGAFYGPKIEFTL---KDCLGRTWQLGTI---QVDFSMPGRLGATYVAEDG 501 Query: 308 -KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 K V + +G++ ++ + G W +AP + ++NI + Sbjct: 502 SKKVPVMLHRAILGSLERFIGILIEHYAGALPPW---LAPVQAVVLNITDRQG---EYAR 555 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +I R + G V D E+IG + L P ++VG K V ++ V ++ R Sbjct: 556 RIEKRFRERGLRVDADLRNEKIGFKIREHTLQKVPYMLVVGDKEVENNTVAVRTR 610 >gi|296331396|ref|ZP_06873868.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676383|ref|YP_003868055.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151511|gb|EFG92388.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414627|gb|ADM39746.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 638 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 2/138 (1%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + RE Q + G E+ P + + LW +SG + Sbjct: 253 LELFMFSEEAPGMPFYLPKGQIIRNELERFSRELQTKAGYEEVRTPFMMNQRLWEQSGHW 312 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D Y ++ + ++ +D P + IF++ + SYR+LP + R E Sbjct: 313 DHY-RDNMYFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGA 371 Query: 147 F-GVMRSREFLMKDAYSF 163 G++R R F DA+ F Sbjct: 372 LNGMLRVRTFCQDDAHIF 389 >gi|293396370|ref|ZP_06640648.1| threonine-tRNA ligase [Serratia odorifera DSM 4582] gi|291421159|gb|EFE94410.1| threonine-tRNA ligase [Serratia odorifera DSM 4582] Length = 387 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 85/413 (20%), Positives = 154/413 (37%), Gaps = 50/413 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y Sbjct: 1 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 60 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 61 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGSLHGLM 119 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N+ ++ G + I ++ + P IG D Sbjct: 120 RVRGFTQDDAHIF-CTEDQVRAEVNECIRMVYDVYGTFGFEKIAVKLSTRPEKRIGTD-- 176 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 D +E D ++ N I ++ A E Sbjct: 177 ---------------------DMWTRAEE-DLAAALTENGIPFEYQPGEGAFYGPKIEFT 214 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L D L R + G + + LP + A++ G + + M I G+M Sbjct: 215 LHDCLD-------RAWQCGTV---QLDFFLPGRLGASYVGENNERVVPVMIHRAILGSME 264 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP ++ ++NI D +++ +L G V D Sbjct: 265 RFIGILTEEYAG---FYPTWIAPVQVVVMNITDSQS---DYVQQLTKKLQDAGIRVKADL 318 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+IG + L P ++ G K V KV ++ R + + EV++ Sbjct: 319 RNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNEVVD 371 >gi|15611183|ref|NP_222834.1| threonyl-tRNA synthetase [Helicobacter pylori J99] gi|8928389|sp|Q9ZMV3|SYT_HELPJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|4154621|gb|AAD05692.1| THREONYL-TRNA SYNTHETASE [Helicobacter pylori J99] Length = 612 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSQALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|83309439|ref|YP_419703.1| threonyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] gi|123740560|sp|Q2WAI1|SYT_MAGMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|82944280|dbj|BAE49144.1| Threonyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] Length = 638 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 8/161 (4%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIHQHSKGIYS--WLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + HQ + S W G V + +R Sbjct: 233 YLHMLEE----AEKRDHRRLGREMELFHQQEEAAGSVFWHKKGWTLYRAVESYMRRRLEA 288 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P L LW SG D + + M + ++++ + P + IFR IK Sbjct: 289 NNYEEVKTPQLVDFSLWEASGHADKFSESMFTIKTQDERHLAVKPMNCPCHVQIFRQGIK 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP + R E G+MR R F DA+ F Sbjct: 349 SYRDLPLRMAEFGSCHRYEPSGALHGIMRVRAFTQDDAHIF 389 >gi|289661762|ref|ZP_06483343.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 636 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 77/394 (19%), Positives = 142/394 (36%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 258 LQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQD 317 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 318 AMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 376 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F L + + L ++ G I ++ P +G D + Sbjct: 377 RVRGFTQDDGHVFCLESQ-IESEVTAFHQQALAVYTAFGFDDIQIKIALRPEKRLGDDAT 435 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A V C ++ + P A Y + H L Sbjct: 436 WDKAEAALRSALGV-CGVEWQELPGEG-------------------AFYGPKIEYH---L 472 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 473 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFIG 525 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G +P +AP ++ ++NI D+ K L+ G V D E+ Sbjct: 526 ILIEHHAGA---FPSWLAPVQVVVVNITDAQAEYVDSVRKT---LANQGFRVSADLRNEK 579 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++VG + + V ++ R Sbjct: 580 IGYKIREHTLQRVPYLLVVGDREKENGAVAVRTR 613 >gi|227537393|ref|ZP_03967442.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] gi|227242771|gb|EEI92786.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] Length = 641 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 81/413 (19%), Positives = 151/413 (36%), Gaps = 61/413 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + ++ Q + G + P + L+V SG Y+ YG++ + Sbjct: 262 GLPLWLPKGAALRQKLIDFMQRAQLKAGYEPVVTPHIGHKQLYVTSGHYEKYGEDSFQPI 321 Query: 98 DR--NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + P + +I+++ +SY++LP F + +R E G+ R R Sbjct: 322 KTPVEGEEFFLKPMNCPHHCEIYKTKPRSYKDLPVRFAEFGTVYRYEQSGELHGLTRVRG 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F P+ K + K+ L +F LG + + + L Sbjct: 382 FTQDDAHLF-CRPDQVKEEFKKVIDLVLYVFGALGFEDYIAQ--------------VSLR 426 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D + D E W A + +EK ++ E Sbjct: 427 DPENRTKYIGSD-----------------------ENWVLAERAIIEAADEKGLPTVVEY 463 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIG 320 + G + +G + GT Y+LP + G+D H V + G Sbjct: 464 GEAAFYGPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNAKHRPVMIHRAPFG 523 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ AV+ G+ +W +AP + ++ + + + +K+ L+ Sbjct: 524 SLERFIAVLIEHCAGRFPLW---LAPEQFIVLPV---SEKYEEYAQKLLESLNNSDIRGL 577 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 D E++G + A++ P +IVG K V ++ +G M+ EE Sbjct: 578 IDLRDEKVGRKIRDAEVKKLPYMLIVGEKEAESGTVSVRKHGSGDVGSMTPEE 630 >gi|254487235|ref|ZP_05100440.1| threonyl-tRNA synthetase [Roseobacter sp. GAI101] gi|214044104|gb|EEB84742.1| threonyl-tRNA synthetase [Roseobacter sp. GAI101] Length = 648 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 82/402 (20%), Positives = 146/402 (36%), Gaps = 56/402 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q G +E++ P + LW +SG +D Y Sbjct: 260 MQEEAPGQVFWHPNGWLIYTQLQDYMRRKQRAGGYVEVNTPQVVDRKLWEKSGHWDKYQD 319 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF +KSYR+LP + R E Sbjct: 320 HMFIVEVDEEHAREKSVNALKPMNCPCHVQIFNQGMKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGG 204 G+MR R F D + F E +++ +L I+ LG ++ ++ P Sbjct: 380 LHGIMRVRGFTQDDGHIF--CREDQIEEETLIYIEFLSAIYKDLGFENFKVKFSDRPDTR 437 Query: 205 DLSHEFIVLADTGETQVFCS--KDFMDFPI-PSENTDFD---DIISLNSIVEQWTAPYAA 258 S E + D E + + K ++ I P E + + + ++I W Sbjct: 438 AGSDE---VWDKAEAALLSATRKAGIEPEINPGEGAFYGPKLEFVLTDAIGRDWQCGTHQ 494 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSY 317 V LPE + ATF G+DG H V + Sbjct: 495 VDFV--------LPER-----------------------LDATFVGSDGAKHRPVMLHRA 523 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 +G+ ++ H GK W +AP ++ + +I + D ++ L+ G Sbjct: 524 TLGSFERFIGILIEEHAGKLPFW---LAPRQVVVASITSE---ADDYVREVIETLTAAGV 577 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + + P+ + VG++ V + V ++ Sbjct: 578 RAEADTRNEKINYKVREHSVGKVPVILAVGAREVEEKTVSVR 619 >gi|159043329|ref|YP_001532123.1| threonyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] gi|189083606|sp|A8LQX9|SYT_DINSH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157911089|gb|ABV92522.1| threonyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] Length = 654 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 86/401 (21%), Positives = 149/401 (37%), Gaps = 54/401 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R Q G +E++ P + LW SG +D Y + Sbjct: 260 MQEEAPGQVFWHPNGWTVYTTLQDYMRRRQRENGYVEVNTPQVVDRKLWEASGHWDKYQE 319 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + ++ +KSYR+LP + R E Sbjct: 320 NMFIVEVDEEHAREKAINALKPMNCPCHVQVYNQGLKSYRDLPLRMAEFGACNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR-LGLKSIPMRAESGP--- 201 G+MR R F DA+ F E F+ L +R LG +S ++ + P Sbjct: 380 LHGLMRVRGFTQDDAHIF--CTEDQIQDETARFIRMLSTIYRDLGFESFDIKFSTRPEVR 437 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD 261 G D + D E ++ I + DF+ + A Y D Sbjct: 438 AGSD------AVWDKAEAA-------LEAAIRTVTDDFE-------LDPGEGAFYGPKLD 477 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI 319 KL D++ R ++G F + LP + AT+ G DG H M I Sbjct: 478 F---KLTDAI-------GREWQLG---TFQADFVLPERLDATYIGEDGAKHRPVMLHRAI 524 Query: 320 -GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G+ ++ + GK W +AP ++ + +I + D ++ A L++ G Sbjct: 525 LGSFERFLGILIENFAGKLPFW---LAPRQVVVASIISE---ADDYVREVVAALTRAGIR 578 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + + P+ + VG + + + V ++ Sbjct: 579 AEADIRNEKINYKVREHSVGKVPVILAVGRREMEERTVTLR 619 >gi|312901397|ref|ZP_07760674.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|311291473|gb|EFQ70029.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0470] Length = 626 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 78/377 (20%), Positives = 151/377 (40%), Gaps = 40/377 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + +L+ SG +D Y ++M Sbjct: 283 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELYKTSGHWDHYHEDMFPPM 342 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + ++++ I SYR LP ++ + R E G+ R RE Sbjct: 343 DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 402 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + P+ K + + + ++ + R LS+ D Sbjct: 403 TLNDGHTF-VRPDQIKDEFKRTLELMVAVYADFNITDYRFR---------LSYR-----D 447 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + D M + D + L+ E A Y DV ++ +L Sbjct: 448 PNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDV---QVKTALGME 504 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESS 332 + +S ++ F ++ L T+ G DG++ + V + + M A + Sbjct: 505 ETLSTIQLD----FLLPERFDL----TYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEV 556 Query: 333 HDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP + ++I +++AH + + E++ A+ G V DD E++G Sbjct: 557 YKGAFPTW---LAPIQATIIPVSVEAHSEYAYEIKERLQAQ----GLRVEVDDRNEKMGY 609 Query: 391 QFAVADLLGFPLQVIVG 407 + + P Q++VG Sbjct: 610 KIRASQTQKVPYQLVVG 626 >gi|47565742|ref|ZP_00236782.1| threonyl-tRNA synthetase [Bacillus cereus G9241] gi|47557378|gb|EAL15706.1| threonyl-tRNA synthetase [Bacillus cereus G9241] Length = 639 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ + K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDHKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|283779278|ref|YP_003370033.1| threonyl-tRNA synthetase [Pirellula staleyi DSM 6068] gi|283437731|gb|ADB16173.1| threonyl-tRNA synthetase [Pirellula staleyi DSM 6068] Length = 666 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 88/419 (21%), Positives = 152/419 (36%), Gaps = 47/419 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML-RL 96 G+ WLP G + + +REE R G + P + DL+ SG + Y M Sbjct: 265 GLILWLPKGATIRGLLESFVREELIRRGYQTVYTPHIGKVDLYRTSGHFPYYADSMFPPF 324 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P + I++S +SYR LP + R E + G+ R R F Sbjct: 325 VTKEEEEYLLKPMNCPHHIMIYKSKPRSYRELPLRLAEFGTVHRYEKSGQLSGMTRVRGF 384 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL---SHEFIV 212 DA+ F T E + + LGL + +R D S E Sbjct: 385 TQDDAHIF-CTDEQVPGEFEGCIEMTQFVLKSLGLDNYRVRLGFRDPKSDKYVGSEELWN 443 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDF----DDIISLNSIVEQWTAPYAATSDVHNEKLF 268 A +V C++ +++ F D + + I +W + +L Sbjct: 444 RAQGALVEV-CTRLGIEYTAEEGEAAFYGPKADFVVTDCIGREW--------QLGTVQLD 494 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAA 327 +LP +R F +Y GAD K H V + +G+M Sbjct: 495 YNLPSAER-------------FDLEYV--------GADNKIHRPVMIHRAPLGSMERFIG 533 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 V+ G +W +AP + ++ + + E+ +L G V D E+ Sbjct: 534 VLIEHFAGAFPLW---LAPEQARVVTVSEKSEAYGREVEE---KLRSAGFRVSGDYRSEK 587 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +G++ A L P +VG + V ++ RL G +SL + + S + + Sbjct: 588 LGAKIRDAQLELIPYMFVVGPRDAEQGTVSLRDRLDGDLGALSLADAMQRLSDEVAERK 646 >gi|197284912|ref|YP_002150784.1| threonyl-tRNA synthetase [Proteus mirabilis HI4320] gi|227355315|ref|ZP_03839716.1| threonyl-tRNA synthetase [Proteus mirabilis ATCC 29906] gi|238693141|sp|B4ETK6|SYT_PROMH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194682399|emb|CAR42252.1| threonyl-tRNA synthetase [Proteus mirabilis HI4320] gi|227164539|gb|EEI49410.1| threonyl-tRNA synthetase [Proteus mirabilis ATCC 29906] Length = 642 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 83/402 (20%), Positives = 148/402 (36%), Gaps = 58/402 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMAFWHNDGWTIFRELETFVRCKLKEYDYQEVKGPFMMDRVLWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF+ ++SYR+LP + R+E G+M Sbjct: 316 NMFTTSSENREYCI-KPMNCPGHVQIFKQGLRSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQILSEVNNCIKLIYDVYSTFGFEKIVVKLSTRPEKRIGED-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI-----PSENTDFDDIISLNSIVEQWTAPYAATSDV 262 L D ET + +K D I P E + I Sbjct: 432 ----ALWDIAETDL--AKALTDNNIEFEYQPGEGAFYGPKIEFT---------------- 469 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGI 319 L+D L R + G + +SLP + A++ + + V + + Sbjct: 470 ----LYDCLD-------RAWQCGTV---QLDFSLPGRLGASYVAENNERKVPVMLHRAVL 515 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G++ ++ + G +P +AP ++ ++NI D +K+ L G Sbjct: 516 GSLERFIGILTEEYAG---FFPTWLAPQQVVVMNITDGQA---DYVQKLVKELQDAGIRA 569 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E+IG + L P ++ G K V KV ++ R Sbjct: 570 KADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTR 611 >gi|184156306|ref|YP_001844646.1| threonyl-tRNA synthase [Lactobacillus fermentum IFO 3956] gi|183227650|dbj|BAG28166.1| threonyl-tRNA synthase [Lactobacillus fermentum IFO 3956] Length = 634 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 80/407 (19%), Positives = 158/407 (38%), Gaps = 35/407 (8%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + + +++ G + P L + D + SG +D Y ++M Sbjct: 250 GLPYWMPKGSTIRRTIERYVIDKEVGDGYEHVYTPVLMNLDAYKTSGHWDHYREDMFPPM 309 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D ++ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 310 DMGDGELLELRPMNCPSHIQIYKHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 369 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 370 TLNDGHTF-VALDQIQDEFAKILKLIMDVYKDFNINDYTFR---------LSYR-----D 414 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + + D M S D + L+ E A Y D+ + +L + Sbjct: 415 PKNTEKYFANDEMWERSQSMLKAAMDSMGLDYYEAEGEAAFYGPKLDIQTKT---ALGND 471 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F K+ L + G DGK H M G +G M A + + Sbjct: 472 ETMSTIQLD----FMLPEKFDL----HYVGEDGKQHRPVMIHRGVVGTMERFVAYLTEIY 523 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++++I + D+ D + + D E++G + Sbjct: 524 KGAFPTW---LAPNQVNIIPVS--DEKHGDYADDLAREFRAAQLRTVVDHRSEKMGYKIR 578 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 + P ++VG V++ V ++ + MS ++ ++ H Sbjct: 579 ESQTQKVPYTLVVGEDEVANGTVSVRKYGEKDQVSMSKQDFLDLILH 625 >gi|298491630|ref|YP_003721807.1| threonyl-tRNA synthetase ['Nostoc azollae' 0708] gi|298233548|gb|ADI64684.1| threonyl-tRNA synthetase ['Nostoc azollae' 0708] Length = 606 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 92/433 (21%), Positives = 165/433 (38%), Gaps = 73/433 (16%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ W P G + +++EQ + G + + P + DL+ SG + Y +++ L Sbjct: 220 GLPLWTPKGTLLRTILEDFLKKEQLKRGYLTVVTPHIARVDLFKTSGHWQKYKEDIFPLM 279 Query: 97 -----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFG-VM 150 A ++ + P + I++ ++SYR LP + +R E G + Sbjct: 280 AEDAEAAAIEQGFVLKPMNCPFHIQIYKGELRSYRELPMRLAEFGTVYRYEQSGELGGLT 339 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F + D++ F +TPE L +EF Sbjct: 340 RVRGFTVDDSHLF-VTPE------------------------------------QLDNEF 362 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV--EQWTAPYAATSDVHNEKLF 268 + + D T VF S +F F D S I E W A + Sbjct: 363 LSVVDLILT-VFRSLQLKNF---KARLSFRDPASDKYIGGDEVWDKSEGAIRRAVQQLGM 418 Query: 269 DSLPENKRVSARGIEVGHIF--------YFGT---KYSLP--MSATFKGADG-KDHYVQM 314 D + G ++ IF GT Y+LP + DG + V + Sbjct: 419 DHFEGIGEAAFYGPKLDFIFSDALDREWQLGTVQVDYNLPERFDLEYVAEDGARKRPVMI 478 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G++ + ++ + G +W +AP +I L+ + Q+ D +++ A++ Sbjct: 479 HRAPFGSLERLIGILIEEYAGDFPLW---LAPVQIRLLPV-GEAQI--DFTKEVVAKMLA 532 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G D GE++G A+ P+ +VG K V + + I+ R +G +S+++V Sbjct: 533 LGIRAEVDLSGERLGKLIRNAEKDKIPVMAVVGVKEVETNSLSIRTRASGELGVISVDQV 592 Query: 435 ---INYASHRFSN 444 I A + FSN Sbjct: 593 VGKIQGAINNFSN 605 >gi|289674657|ref|ZP_06495547.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5] Length = 248 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M G +GK + Sbjct: 180 PVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGKPVNL 239 Query: 313 QMGSYGIG 320 MG YGIG Sbjct: 240 AMGCYGIG 247 >gi|260662523|ref|ZP_05863418.1| threonyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] gi|260553214|gb|EEX26157.1| threonyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] Length = 627 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 80/407 (19%), Positives = 158/407 (38%), Gaps = 35/407 (8%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + + +++ G + P L + D + SG +D Y ++M Sbjct: 243 GLPYWMPKGSTIRRTIERYVIDKEVGDGYEHVYTPVLMNLDAYKTSGHWDHYREDMFPPM 302 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D ++ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 303 DMGDGELLELRPMNCPSHIQIYKHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 362 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 363 TLNDGHTF-VALDQIQDEFAKILKLIMDVYKDFNINDYTFR---------LSYR-----D 407 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + + D M S D + L+ E A Y D+ + +L + Sbjct: 408 PKNTEKYFANDEMWERSQSMLKAAMDSMGLDYYEAEGEAAFYGPKLDIQTKT---ALGND 464 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F K+ L + G DGK H M G +G M A + + Sbjct: 465 ETMSTIQLD----FMLPEKFDL----HYVGEDGKQHRPVMIHRGVVGTMERFVAYLTEIY 516 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++++I + D+ D + + D E++G + Sbjct: 517 KGAFPTW---LAPNQVNIIPVS--DEKHGDYADDLAREFRAAQLRTVVDHRSEKMGYKIR 571 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 + P ++VG V++ V ++ + MS ++ ++ H Sbjct: 572 ESQTQKVPYTLVVGEDEVANGTVSVRKYGEKDQVSMSKQDFLDLILH 618 >gi|110667672|ref|YP_657483.1| prolyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790] gi|121689813|sp|Q18JG3|SYP_HALWD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|109625419|emb|CAJ51843.1| proline--tRNA ligase [Haloquadratum walsbyi DSM 16790] Length = 512 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 4/157 (2%) Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y GT+++ T+ D S+G+ + R + A+I + D +G++ P +VAP + Sbjct: 237 YLGTEFADAFDITYTDTDETSRVAHTTSWGL-SWRALGALIMTHSDNQGLVLPPTVAPEQ 295 Query: 349 ISLINIKAHDQVCR--DACEKIYARLSKVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVI 405 + ++ I + R + E + L G V DD +Q G +F +L G PL+ Sbjct: 296 VVIVPIWQTETKERVLEYAEDVANNLDDAGIRVELDDRDDQNPGFKFNEWELKGVPLRAE 355 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +G ++ V + HR G E++ +F Sbjct: 356 IGPDEATEGTVTLIHRPDGESITAERSEIVETVQEQF 392 >gi|296228693|ref|XP_002759920.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 2 [Callithrix jacchus] Length = 588 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 94/412 (22%), Positives = 157/412 (38%), Gaps = 69/412 (16%) Query: 51 DNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL----ADR------- 99 D ++ + + E R G E+ PTL S LW +SG ++ Y ++M + +DR Sbjct: 203 DQLHRLFKAEYARRGFFEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPASSQSD 262 Query: 100 -----NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + P + +F +S+R LP R E G+ R R Sbjct: 263 HSTRHTTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLCGLTRLR 322 Query: 154 EFLMKDAYSFDLTPE-----GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 F DA+ F T + S + + + L RL L + P SG +G Sbjct: 323 CFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLALSTRP----SGFLGDP--- 375 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 C D + + +F + LNS A Y DVH L Sbjct: 376 --------------CLWDQAEQVLQQALKEFGEPWDLNSGD---GAFYGPKIDVH---LH 415 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPM--SATFKGADGK-DHYVQMGSYGIGAMRVV 325 D+L R + G I + LP+ +KG G + V + +G++ + Sbjct: 416 DAL-------GRPHQCGTI---QLDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERL 465 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDM 384 V+ S GK WP ++PF++ +I + ++ R+ + + A + + CD+ D Sbjct: 466 LGVLAESCRGK---WPLWLSPFQVVVIPVGTEQEEYARETQQSLQA--AGLVCDLDADSR 520 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + + A L + Q +VG K S S V I+ R + + SL E + Sbjct: 521 -LTLSRRIRRAQLAHYNFQFVVGQKEQSKSTVNIRTRDNRLLGEWSLPEAVQ 571 >gi|238922935|ref|YP_002936448.1| prolyl-tRNA synthetase [Eubacterium rectale ATCC 33656] gi|259511596|sp|C4ZC24|SYP_EUBR3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|238874607|gb|ACR74314.1| prolyl-tRNA synthetase [Eubacterium rectale ATCC 33656] gi|291523823|emb|CBK89410.1| prolyl-tRNA synthetase, family I [Eubacterium rectale DSM 17629] gi|291528709|emb|CBK94295.1| prolyl-tRNA synthetase, family I [Eubacterium rectale M104/1] Length = 479 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 77/358 (21%), Positives = 136/358 (37%), Gaps = 79/358 (22%) Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--L 137 WV G ++ + RLA R PT E + ++F ++S+R+LP + Q + Sbjct: 97 WVTQGGLETLQE---RLAVR--------PTSETLFCELFSKTVQSHRDLPKVYNQWCSVV 145 Query: 138 KFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA 197 ++ RP +RS EFL ++ ++ T E ++ +M Y Sbjct: 146 RWEKTTRP---FLRSSEFLWQEGHTVHATAEEAEARTVQMLNIY---------------- 186 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPY 256 AD FC K ++ P + TD + A Y Sbjct: 187 ----------------AD------FCEK-YLAIPMVKGRKTDKEKFAGAE-------ATY 216 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 + +H+ K S G FG + + D K Y S Sbjct: 217 TIEALMHDGKALQS--------------GTSHNFGDGFPKAFGIQYTDKDNKLQYCHETS 262 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 +G+ + R++ A+I D G++ P +AP ++ +I I+ D + +LSK Sbjct: 263 WGV-STRLIGAIIMVHGDDSGLVLPPKIAPTQVMVIPIQQQKDGVLDKAYDLKDKLSK-D 320 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V D + G +FA ++ G ++ +G K + ++ I R T + +SL+EV Sbjct: 321 FRVKIDATDKTPGWKFAAQEVQGISTRIEIGPKDIEKNQCVIVRRDTREKIVVSLDEV 378 >gi|227514102|ref|ZP_03944151.1| threonine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227087473|gb|EEI22785.1| threonine--tRNA ligase [Lactobacillus fermentum ATCC 14931] Length = 634 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 80/407 (19%), Positives = 158/407 (38%), Gaps = 35/407 (8%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + + +++ G + P L + D + SG +D Y ++M Sbjct: 250 GLPYWMPKGSTIRRTIERYVIDKEVGDGYEHVYTPVLMNLDAYKTSGHWDHYREDMFPPM 309 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D ++ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 310 DMGDGELLELRPMNCPSHIQIYKHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 369 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 370 TLNDGHTF-VALDQIQDEFAKILKLIMDVYKDFNINDYTFR---------LSYR-----D 414 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + + D M S D + L+ E A Y D+ + +L + Sbjct: 415 PKNTEKYFANDEMWERSQSMLKAAMDSMGLDYYEAEGEAAFYGPKLDIQTKT---ALGND 471 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F K+ L + G DGK H M G +G M A + + Sbjct: 472 ETMSTIQLD----FMLPEKFDL----HYVGEDGKQHRPVMIHRGVVGTMERFVAYLTEIY 523 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++++I + D+ D + + D E++G + Sbjct: 524 KGAFPTW---LAPNQVNIIPVS--DEKHGDYADDLAREFRAAQLRTVVDHRSEKMGYKIR 578 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 + P ++VG V++ V ++ + MS ++ ++ H Sbjct: 579 ESQTQKVPYTLVVGEDEVANGTVSVRKYGEKDQVSMSKQDFLDLILH 625 >gi|26989188|ref|NP_744613.1| threonyl-tRNA synthetase [Pseudomonas putida KT2440] gi|38258320|sp|Q88K27|SYT_PSEPK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|24984027|gb|AAN68077.1|AE016439_12 threonyl-tRNA synthetase [Pseudomonas putida KT2440] gi|313499446|gb|ADR60812.1| ThrS [Pseudomonas putida BIRD-1] Length = 640 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 3/187 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R Q G E+ P + LW SG + +Y + Sbjct: 255 LQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDRILWERSGHWSNYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTSSESRDYAV-KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F+ DA+ F + K + + + ++ L ++ G I M+ + P S E Sbjct: 374 RVRGFVQDDAHIFCTEDQVKKEAADFIKLT-LDVYKDFGFSDIAMKLSTRPAKRVGSEEL 432 Query: 211 IVLADTG 217 A+T Sbjct: 433 WDRAETA 439 >gi|308049557|ref|YP_003913123.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Ferrimonas balearica DSM 9799] gi|307631747|gb|ADN76049.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Ferrimonas balearica DSM 9799] Length = 644 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 6/177 (3%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W G + +R++ ++ G E+ P + +W SG +D Y E Sbjct: 257 QEEAPGMVFWHNDGWTIYQELEGFMRKQLHKYGYEEVRTPLVMDKVMWERSGHWDKYS-E 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M+ + + P + IF+ +KSYR+LP+ + L R+E G+MR Sbjct: 316 MIFATESEKRTYAVKPMNCPGHLQIFKQGLKSYRDLPYRMAEFGLVHRNEPSGSLHGLMR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R F DA+ F T E + G + I ++ + P IG D Sbjct: 376 VRSFTQDDAHIF-CTEEQILDEVTSCIKMVYDTYKTFGFEEIEVKLSTRPEQRIGSD 431 >gi|305664329|ref|YP_003860617.1| prolyl-tRNA synthetase [Ignisphaera aggregans DSM 17230] gi|304378898|gb|ADM28737.1| prolyl-tRNA synthetase [Ignisphaera aggregans DSM 17230] Length = 493 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 6/166 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG+ W+P G + NV IIR N TG E+ P L L+ ES + E+L Sbjct: 36 KGMGIWMPYGFQIRRNVIEIIRNLLNETGHEEVLFPILIPEILFRRESEHVRGFEGEVLW 95 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + + D ++ PT E ++ + IKSY+ LP +YQ+ FR E + ++R Sbjct: 96 VTRGGNEELDVKLVLRPTSETAISYMESFWIKSYKQLPKKYYQVVSVFRYETKMTKPMIR 155 Query: 152 SREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 RE K+A++ E S+ + Y + F LG+ I R Sbjct: 156 VREITTFKEAHTVHENFEDSERQVLEAIDIYSKFFDELGIPYIISR 201 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 6/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R I++G + G ++ + D Y SYGI RV+A++I D G+ Sbjct: 224 GRAIQIGTVHNLGQTFTSVFDVKIQKRDETIDYAWQTSYGISE-RVIASIIAIHSDDIGL 282 Query: 339 IWPDSVAPFKISLINIKAHD----QVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFA 393 I P +VAP+ + +I I D Q + C I+ L D+ + + ++ Sbjct: 283 ILPSNVAPYTVVIIPIPHQDEKIYQSIINYCNDIHNILKVNNIRSLIDERLDVKPAEKYR 342 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +L G P+++ +G K VS + V + R R ++ +E+I+ Sbjct: 343 ECELKGVPIRIEIGFKEVSQNTVTLFRRDLRKRFTINKDELIS 385 >gi|218886086|ref|YP_002435407.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226701453|sp|B8DPN2|SYT_DESVM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|218757040|gb|ACL07939.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 644 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 2/127 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G + +R+E + G + P L ++W +SG YD+Y +E + Sbjct: 259 APGMVYWHPKGMLLRTILEDFLRKEHLKRGYELVQGPQLLRREVWEKSGHYDNY-RENMY 317 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +D A P + I++SH++SYR+LP +++ + R E G++R R+ Sbjct: 318 FTVIDDNAYGVKPMNCVSHMLIYKSHLRSYRDLPRRMFELGVVHRHEKSGVLHGLLRVRQ 377 Query: 155 FLMKDAY 161 F DA+ Sbjct: 378 FTQDDAH 384 >gi|167422088|ref|ZP_02313841.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|166958900|gb|EDR55921.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] Length = 369 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 75/358 (20%), Positives = 129/358 (36%), Gaps = 42/358 (11%) Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E+ P + LW ++G +++Y + M + N + I P + IF +KSYR+ Sbjct: 19 EVKGPFMMDRVLWEKTGHWENYAEHMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRD 77 Query: 128 LPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP + R+E G+MR R F DA+ F T E + N ++ Sbjct: 78 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVF-CTEEQVRDEVNSCIKMVYDMYS 136 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 G + I ++ + P S E A+ P E + I Sbjct: 137 TFGFEKIVVKLSTRPEKRIGSDELWTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFT 196 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKG 304 L D L R + G + +SLP +SA++ G Sbjct: 197 --------------------LHDCLD-------RAWQCGTV---QLDFSLPGRLSASYIG 226 Query: 305 ADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + M I G+M ++ + G +P +AP ++ ++NI D Sbjct: 227 ENNDRQVPVMIHRAILGSMERFIGILTEEYAG---FFPTWLAPVQVVVMNITDSQS---D 280 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +++ +L G D E+IG + L P ++ G K V K+ ++ R Sbjct: 281 YVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTR 338 >gi|317503053|ref|ZP_07961132.1| threonine--tRNA ligase [Prevotella salivae DSM 15606] gi|315665826|gb|EFV05414.1| threonine--tRNA ligase [Prevotella salivae DSM 15606] Length = 649 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 90/418 (21%), Positives = 149/418 (35%), Gaps = 69/418 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G + + ++R E+ P + L+V SG Y YGK+ + Sbjct: 263 KGLPIWLPKGTQLRLRLQKLLRSLLRPYHYQEVITPGIGGKSLYVTSGHYAHYGKDAFQP 322 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D+ + P + +++ +SY++LP + FR E G+ R R Sbjct: 323 IHTPEEDEEYMLKPMNCPHHCEVYARKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F + P+ K + L++F + + I L Sbjct: 383 TFTQDDAHIF-VRPDQVKSEFETNIDIILKVFKTFHFDNYEAQ--------------ISL 427 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + + D E W A + EK + E Sbjct: 428 RDPKDKEKYIGSD-----------------------EIWEESENAIREACKEKGLVAHEE 464 Query: 274 NKRVSARGIE--------VGHIFYFGT---KYSLPMSATFK-----GADGKDHYVQMGSY 317 + G + +G + GT Y+LP A FK + K V + Sbjct: 465 IGEAAFYGPKLDFMVKDAIGRKWQLGTIQVDYNLP--ARFKLEYTAEDNTKKTPVMIHRA 522 Query: 318 GIGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 G++ AV+ G +W PD VA IS + D +++ V Sbjct: 523 PFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYAKQVGQYFDTV 574 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G DD E+IG + +L P VIVG K ++ V ++ + G + M +EE Sbjct: 575 GVRSVIDDRNEKIGRKIRDNELKRIPYMVIVGEKEAAEGLVSMRKQGGGEQATMKMEE 632 >gi|15644753|ref|NP_206923.1| threonyl-tRNA synthetase [Helicobacter pylori 26695] gi|2501057|sp|P56071|SYT_HELPY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2313207|gb|AAD07192.1| threonyl-tRNA synthetase (thrS) [Helicobacter pylori 26695] Length = 612 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSQALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|75764566|ref|ZP_00744025.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487945|gb|EAO51702.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 445 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 59 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 118 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 119 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 177 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 178 LNGLLRVRTFCQDDAHLF-VTPK 199 >gi|242398996|ref|YP_002994420.1| Prolyl-tRNA synthetase [Thermococcus sibiricus MM 739] gi|242265389|gb|ACS90071.1| Prolyl-tRNA synthetase [Thermococcus sibiricus MM 739] Length = 488 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 4/148 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + ++ ++ T++ +G YV ++G+ R+VAA++ D G+ Sbjct: 228 GRTLQIGTMHHYKQNFAKAYEITYETEEGTHEYVHQTTFGMSE-RLVAAIMGVHGDDSGL 286 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVA 395 + P ++AP ++ +I I K ++I L G + DD + + G +F Sbjct: 287 VLPPTIAPVQVVVIPIPMKESPYDVNAYAKEIAEELKTAGLRIHVDDREDVRPGRKFYDW 346 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ G PL++ VG K V +++ R T Sbjct: 347 EIKGVPLRIEVGPKDVEENQAVFARRDT 374 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 5/124 (4%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + N+ +I E RTG E+ P L ++ E+ + E+L Sbjct: 40 KGMNVWLPYGLRIMRNIENLIHMEMVRTGHNEVLFPALIPESEFEREAEHIAGFHGEVLW 99 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + ++ + I PT E M +F I+S+ +LPF YQI +R E + ++R Sbjct: 100 VTHAGERPLDVKLILRPTSETAMYPMFNLWIRSHADLPFKIYQIVNVYRYETKHTRPLIR 159 Query: 152 SREF 155 RE Sbjct: 160 VREI 163 >gi|229150586|ref|ZP_04278801.1| Threonyl-tRNA synthetase [Bacillus cereus m1550] gi|228632895|gb|EEK89509.1| Threonyl-tRNA synthetase [Bacillus cereus m1550] Length = 640 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|206901980|ref|YP_002250545.1| prolyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] gi|206741083|gb|ACI20141.1| prolyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] Length = 480 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 14/192 (7%) Query: 255 PYAATSDVHNEKLFDSLP----ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 P A NEK +L E R ++ G G ++ F+ DG+ Sbjct: 195 PVIAGRKTENEKFAGALHTYSIEVLLADGRALQAGTSHNLGQHFAKAFDIMFQDVDGERK 254 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEK 367 YV S+G+ + R++ A+I + D G++ P VAP++I +I I + + ++ Sbjct: 255 YVWQTSWGV-STRLIGALIMTHGDDYGLVLPPRVAPYQIVIIPIWKSETDKTKVYNYVDE 313 Query: 368 IYARLSK---VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 IY L K V D D G +F +L G P++V +G K V ++ + R Sbjct: 314 IYEVLRKYFRVKVD---KDEEHTPGWKFNEWELKGVPVRVEIGPKEVEKQELYVARRDLR 370 Query: 425 IREDMSLEEVIN 436 I+ + E ++ Sbjct: 371 IKMSIKRENMVQ 382 Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust. Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 11/186 (5%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K F+ L D +++L+ ++ + KG P G +N+ I+ E+ Sbjct: 2 EKKFVEELTSQKEDFSKWYTEVVLKADLVDYSPVKGCMVIKPYGYAIWENMQRILDEKIK 61 Query: 63 RTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLRLADRNDKAMI----YGPTHEEVMTDI 117 TG + P + + L E+ + + ++ + D+ + PT E ++ + Sbjct: 62 ATGHVNAYFPLFIPKSFLEKEAEHVEGFSPQVAWVTKGGDEELFEPLAVRPTSEAIICSM 121 Query: 118 FRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 + I+S+R+LP Q +++ E RP +R+ EFL ++ ++ T E ++ Sbjct: 122 YSKWIQSWRDLPVLINQWANVVRWEKETRP---FLRTTEFLWQEGHTAHRTFEEAEEEAL 178 Query: 176 KMFVSY 181 +M Y Sbjct: 179 RMLNVY 184 >gi|78222623|ref|YP_384370.1| threonyl-tRNA synthetase [Geobacter metallireducens GS-15] gi|78193878|gb|ABB31645.1| Ser-tRNA(Thr) hydrolase [Geobacter metallireducens GS-15] Length = 645 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 3/132 (2%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G W P G + R+E + G + P + DLW SG YD+Y +E + Sbjct: 272 GFVIWHPNGAMLRTILEDFERKEHLKRGYDIVVGPQILKTDLWQRSGHYDNY-RENMYFT 330 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +++ P + I++SH++SYR+LP F+++ R E G++R R F Sbjct: 331 EVEEQSFGIKPMNCLSHMMIYKSHLRSYRDLPLRFFELGTVHRHERAGVLHGLLRVRCFT 390 Query: 157 MKDAYSFDLTPE 168 DA+ TPE Sbjct: 391 QDDAHIL-CTPE 401 >gi|332287873|ref|YP_004422774.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|313848445|emb|CBY17449.1| threonyl-tRNA synthetase [Chlamydophila psittaci RD1] gi|325506736|gb|ADZ18374.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|328915135|gb|AEB55968.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC] Length = 635 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 94/430 (21%), Positives = 160/430 (37%), Gaps = 54/430 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + KL L + + S G+ + P G D + + G E+ P L Sbjct: 236 RDHRVLGTKLDLFSQ--QECSAGMPFFHPRGMIIWDALIGYWKRLHQLAGYKEIQTPQLM 293 Query: 76 SADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 + LW SG + +Y + M L D D A+ P + +++ + SY+ P + Sbjct: 294 NRSLWEVSGHWSNYRENMYTLKIDDEDYAI--KPMNCPGCMLYYKTRLHSYKQFPLRIAE 351 Query: 135 IQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-- 191 I R E+ G+MR R F DA+ F LTPE + + ++ GL+ Sbjct: 352 IGHVHRYEVSGALSGLMRVRAFHQDDAHVF-LTPEQVEEETLNILHLVSELYSTFGLEYH 410 Query: 192 -SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + R E IG D E A ++ + + NT F II+ Sbjct: 411 LELSTRPEKATIGSDELWELATAA-------------LERALINSNTPF--IINPGD--- 452 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADG 307 A Y D+H K R + G I + ++ L + A G Sbjct: 453 --GAFYGPKIDIH----------VKDAIQRTWQCGTIQLDMFLPERFEL----EYTNAQG 496 Query: 308 -KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 K V + G++ ++ G+ +W ++P I LI + Q + Sbjct: 497 EKSTPVMLHRALFGSIERFLGILIEHFKGRFPLW---LSPEHIRLITVADRHQ---PRAQ 550 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ K+G V DD E + + A + V +G + + + + I+ R + Sbjct: 551 KLATAWQKLGLIVTVDDSNESVSKKIRNAQNMQVNYMVTLGDREIEQNTLAIRTRDNRVL 610 Query: 427 EDMSLEEVIN 436 DM+ ++ IN Sbjct: 611 NDMTEDKFIN 620 >gi|52078698|ref|YP_077489.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52784060|ref|YP_089889.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52001909|gb|AAU21851.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52346562|gb|AAU39196.1| ThrZ [Bacillus licheniformis ATCC 14580] Length = 639 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP GQ + + RE QN E+ P + + LW +SG +D Y Sbjct: 258 MFSEEAPGMPFYLPKGQIVRKELEKLSRELQNNASYDEVHTPFMMNYRLWEKSGHWDHY- 316 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +E + ++ ++ P + IF++++ SYR+LP + R E G+ Sbjct: 317 QENMYFSEVDNTKFAIKPMNCPGHMLIFKNNLYSYRDLPIRLAEYGQVHRHEFSGSLNGL 376 Query: 150 MRSREFLMKDAYSF 163 +R R F DA+ F Sbjct: 377 LRVRTFCQDDAHIF 390 >gi|167648480|ref|YP_001686143.1| threonyl-tRNA synthetase [Caulobacter sp. K31] gi|189083602|sp|B0T0Z7|SYT_CAUSK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|167350910|gb|ABZ73645.1| threonyl-tRNA synthetase [Caulobacter sp. K31] Length = 659 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 4/161 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + KG+ W P G + A +R + G E+ P + LW SG + +G Sbjct: 262 IQEEGKGMVFWHPKGWTLYLALEAYMRRRLDAAGYREVKTPQILDKSLWERSGHAEKFGH 321 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF KSYR LP + R E G+M Sbjct: 322 AMFMCESAEGEVLAVKPMNCPGHIQIFNVGQKSYRELPLRMAEFGACHRYEPSGAMHGIM 381 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGL 190 R R F DA+ F + ++ S F+ LR ++ LG+ Sbjct: 382 RVRAFTQDDAHIFCREEQVTEESAR--FIELLRSVYSDLGM 420 >gi|30020454|ref|NP_832085.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|229127762|ref|ZP_04256751.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|29896005|gb|AAP09286.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|228655839|gb|EEL11688.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] Length = 640 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|229161333|ref|ZP_04289318.1| Threonyl-tRNA synthetase [Bacillus cereus R309803] gi|228622147|gb|EEK78988.1| Threonyl-tRNA synthetase [Bacillus cereus R309803] Length = 639 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +R Q E+ P + + +LW +SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLRGIQKEYNYQEVRTPFMMNQELWEKSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|222056447|ref|YP_002538809.1| threonyl-tRNA synthetase [Geobacter sp. FRC-32] gi|221565736|gb|ACM21708.1| threonyl-tRNA synthetase [Geobacter sp. FRC-32] Length = 645 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 87/386 (22%), Positives = 153/386 (39%), Gaps = 39/386 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R E + + P + DLW SG YD+Y +E + Sbjct: 272 GLVIWHPKGAMLRTIIEDFERREHLKRDYDIVVGPQILKTDLWQRSGHYDNY-RENMYFT 330 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++++ P + I++S ++SYR+LP +++ R E G++R R F Sbjct: 331 EVDEQSFGIKPMNCLSHMMIYKSRLRSYRDLPLRLFELGTVHRHERAGVLHGLLRVRCFT 390 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ TPE S K +S+++ + G EF + T Sbjct: 391 QDDAHIL-CTPE-QLDSEIKGVISFVQ-----------------DVMGVFGFEFEMELST 431 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + S + D + D I E A Y D+ KL DSL ++R Sbjct: 432 RPEKSIGSDEDWDRATNALLGALKDSGRPFEINEGDGAFYGPKIDI---KLRDSL--DRR 486 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDG 335 I+ F ++ L T+ ADG K V + +G++ V+ G Sbjct: 487 WQCATIQCD--FTLPERFDL----TYIDADGEKKRPVMVHRVILGSIERFIGVLIEHFAG 540 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 +W ++P ++ ++ + +Q+ +++YA L G V D E++G + A Sbjct: 541 SFPVW---LSPVQVVVLTV-TDNQLS--FAQQVYAELRAAGLRVQQDFRNEKLGFKIREA 594 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHR 421 L P +++G K V V + R Sbjct: 595 QLQKIPYMLVIGDKEVEAGMVTPRFR 620 >gi|228958638|ref|ZP_04120356.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801059|gb|EEM47958.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 640 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|312875562|ref|ZP_07735563.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|311088816|gb|EFQ47259.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] Length = 643 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 83/408 (20%), Positives = 162/408 (39%), Gaps = 39/408 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 379 TLNDGHTF-VELDQVQSEFAKILKLIMEVYRDFDITDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M + DD+ E A Y D+ + +L + Sbjct: 424 PKNTDKYFANDEMWERSQKMLKGAMDDLGLEYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F +++L ++ G DG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFNL----SYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N AH + ++ ++ L K+G D E++G + Sbjct: 533 KGAFPTW---LAPLQVKIIPVNNDAHGEYAQNVKDQ----LMKLGFRAEVDFRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 A P +++G + + V ++ + +E +L E ++ S Sbjct: 586 IREAQTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELS 633 >gi|217031884|ref|ZP_03437386.1| hypothetical protein HPB128_3g3 [Helicobacter pylori B128] gi|298736935|ref|YP_003729465.1| threonyl-tRNA synthetase [Helicobacter pylori B8] gi|216946353|gb|EEC24958.1| hypothetical protein HPB128_3g3 [Helicobacter pylori B128] gi|298356129|emb|CBI67001.1| threonyl-tRNA synthetase [Helicobacter pylori B8] Length = 612 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSQALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|210134324|ref|YP_002300763.1| threonyl-tRNA synthetase [Helicobacter pylori P12] gi|238065114|sp|B6JPM2|SYT_HELP2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|210132292|gb|ACJ07283.1| threonyl-tRNA synthetase [Helicobacter pylori P12] Length = 612 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSQALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|196000905|ref|XP_002110320.1| hypothetical protein TRIADDRAFT_22327 [Trichoplax adhaerens] gi|190586271|gb|EDV26324.1| hypothetical protein TRIADDRAFT_22327 [Trichoplax adhaerens] Length = 603 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 6/127 (4%) Query: 43 LPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD---- 98 LP G + ++ + +++E G E+ P + +LWV+SG +D Y +M RL Sbjct: 261 LPHGLRIINKLKNFLKDEYRVRGYHEVETPLTFNQELWVQSGHWDHYSDDMFRLQSDPQD 320 Query: 99 -RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 N ++ P + IF + SYR+LP + RDE G+ R R+F Sbjct: 321 HENRGSISLKPMNCPGHCLIFGNERHSYRDLPVRLAEFSALHRDEPSGSLGGLTRLRQFH 380 Query: 157 MKDAYSF 163 DA+ F Sbjct: 381 QDDAHIF 387 >gi|126725645|ref|ZP_01741487.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] gi|126704849|gb|EBA03940.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] Length = 649 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 80/399 (20%), Positives = 140/399 (35%), Gaps = 50/399 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + + +R +Q G +E++ P + LW SG ++ Y + Sbjct: 261 MQEEAPGQVFWHPNGWRIYTTLQDFMRRKQVAGGYVEVNTPQVVDRKLWEASGHWEKYQE 320 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF +KSYR+LP + R E Sbjct: 321 NMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNVGLKSYRDLPIRMAEFGSCNRYEPSGA 380 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGG 204 G+MR R F D + F E +++ +L I+ LG ++ ++ P Sbjct: 381 LHGIMRVRGFTQDDGHIF--CEESQIEEETAIYIEFLTSIYKDLGFENFRVKFSDRPEVR 438 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD---DIISLNSIVEQWTAPYAATSD 261 S E A+T + P E + + + ++I W Sbjct: 439 AGSDEVWDRAETALLNATRAAGIEPEMNPGEGAFYGPKLEFVLTDAIGRDWQCGTHQVDF 498 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIG 320 V LPE + A + G DG H V + +G Sbjct: 499 V--------LPER-----------------------LDANYVGQDGAKHRPVMLHRATLG 527 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + ++ H GK W +AP ++ + +I D +++ A L G Sbjct: 528 SFERFIGILIEEHAGKLPFW---LAPRQVVVASIVTD---ANDYAQEVVAELRAAGVLAE 581 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + L P+ + VG K V++ V ++ Sbjct: 582 ADIRNEKINYKVREHSLGKVPVILAVGMKEVAERTVSVR 620 >gi|110679173|ref|YP_682180.1| threonyl-tRNA synthetase [Roseobacter denitrificans OCh 114] gi|123362019|sp|Q168U9|SYT_ROSDO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|109455289|gb|ABG31494.1| threonyl-tRNA synthetase [Roseobacter denitrificans OCh 114] Length = 648 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 91/404 (22%), Positives = 150/404 (37%), Gaps = 60/404 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q G E++ P + LW SG +D Y + Sbjct: 260 MQEEAPGQVFWHPNGWSIYTTLQDYMRRKQRAAGYQEVNTPQVVDRKLWEASGHWDKYQE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + D A P + IF +KSYR+LP + R E Sbjct: 320 HMFIVEVDEDHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGG 204 G+MR R F D ++F E + F++YL ++ LG + Sbjct: 380 LHGIMRVRGFTQDDGHTF--CREDQIEAECAAFITYLSSVYQDLGFEKFE---------- 427 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 I+ A E +V + + EN ++ PY T D Sbjct: 428 ------IMFATRPEKRVGSEESWDHVEAALENA-----------IKATGHPY--TLDEGE 468 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQM------GS 316 + + K A G E F +LP + AT+ G DG H M GS Sbjct: 469 GAFYGPKLDFKLTDAIGRE-WQCGTFQVDPNLPERLDATYIGQDGAKHRPYMLHRACLGS 527 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 + R + +IE+S GK W +AP ++ + +I + D + EK+ A + Sbjct: 528 F----ERFIGILIENSA-GKLPFW---LAPRQVVVASIISDADDYVLEVVEKLQAAGVRA 579 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 DV E+I + + P+ + VG++ V + V ++ Sbjct: 580 EADV----RNEKINYKVREHSVGKVPVILAVGAREVEEKTVTLR 619 >gi|116630042|ref|YP_815214.1| threonyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|238853770|ref|ZP_04644136.1| threonine--tRNA ligase [Lactobacillus gasseri 202-4] gi|282851336|ref|ZP_06260701.1| threonine--tRNA ligase [Lactobacillus gasseri 224-1] gi|311110329|ref|ZP_07711726.1| threonine--tRNA ligase [Lactobacillus gasseri MV-22] gi|122273021|sp|Q041U6|SYT_LACGA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116095624|gb|ABJ60776.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|238833579|gb|EEQ25850.1| threonine--tRNA ligase [Lactobacillus gasseri 202-4] gi|282557304|gb|EFB62901.1| threonine--tRNA ligase [Lactobacillus gasseri 224-1] gi|311065483|gb|EFQ45823.1| threonine--tRNA ligase [Lactobacillus gasseri MV-22] Length = 643 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 86/404 (21%), Positives = 160/404 (39%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I +++ G + P L + D + SG + Y +M Sbjct: 259 GLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNVDAYKTSGHWAHYRDDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 379 TLNDGHTF-VALDQIREEFAKVLKLIMDVYKDFDITDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M S D + L+ + E A Y D+ + +L + Sbjct: 424 PKNTDKYYANDEMWEKSQSMLKAAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFGL----TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N +AH +K+ L+K G D E++G + Sbjct: 533 KGAFPTW---LAPVQAEIIPVNEEAHGAY----ADKVREELAKRGFRAEVDHRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + P +++G ++ + V ++ T + SL++ I Sbjct: 586 IRESQTQKVPYTLVLGDDEMNANGVNVRRYGTEEQISKSLDDFI 629 >gi|258647248|ref|ZP_05734717.1| proline--tRNA ligase [Prevotella tannerae ATCC 51259] gi|260852895|gb|EEX72764.1| proline--tRNA ligase [Prevotella tannerae ATCC 51259] Length = 494 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/163 (21%), Positives = 81/163 (49%), Gaps = 5/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ + D + Y S+G+ + R++ A+I + D G+ Sbjct: 236 GKALQNGTSHFLGQNFAKAFGVQYVDKDNQLQYPWATSFGV-STRMMGALIMTHSDDNGL 294 Query: 339 IWPDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I ++ Q + E I + L G V +D+ ++ G +FA Sbjct: 295 VLPPHLAPIQVVIVPIYKNNEELQKLDERLEAIASTLRGKGIRVKYDNADNKRPGFKFAD 354 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +L G P+++++G + + + +E+ R T +E + +E + Y Sbjct: 355 YELKGVPVRLVMGGRDLQNGTIELMRRDTLEKETLQVEGIEEY 397 >gi|87309081|ref|ZP_01091218.1| threonyl-tRNA synthetase [Blastopirellula marina DSM 3645] gi|87288072|gb|EAQ79969.1| threonyl-tRNA synthetase [Blastopirellula marina DSM 3645] Length = 668 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 86/411 (20%), Positives = 155/411 (37%), Gaps = 47/411 (11%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML- 94 +G+ WLP G + + E+ + + P + DL+ SG Y Y Sbjct: 263 GQGLILWLPKGAVVRQQLTDFVSEQLKKHEYESVFTPNIGKVDLYKTSGHYPYYKDSQFP 322 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + +D+ + P + I+++ +SYR LP + +R E G+ R R Sbjct: 323 PIHVSDDEEYLLKPMNCPHHIMIYKNRPRSYRELPVRLSEFGTVYRYEQSGELNGMTRVR 382 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIV 212 F DA+ F + E + + K + + LGL +R P G V Sbjct: 383 GFCQDDAHIFCME-EQVEEEFRKCIEMTQYVLNSLGLTDYRVRLGFRDPDNGKYVGNSKV 441 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP-YAATSD-VHNEKLFDS 270 ++ V K+ + ++++ E A Y +D V N+ L Sbjct: 442 WDRAEQSLVSVCKN----------------MGIDAVAEAGEAAFYGPKADFVVNDCL--- 482 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFK----GADGKDHY-VQMGSYGIGAMRVV 325 R ++G + Y+LP + F GAD + H V + G++ Sbjct: 483 --------GREWQLGTV---QLDYNLPSTERFALEYVGADNQMHRPVMIHRAPFGSLERF 531 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 V+ G +W +AP ++ ++ + Q + K+ A L + G V D Sbjct: 532 MGVLIEHFAGAFPLW---LAPEQVRVLVV---SQKFEEYARKVEAELKQAGFRVKGDYRP 585 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+IGS+ A L P ++G + + V ++ R+ G M + E I+ Sbjct: 586 EKIGSKIRDAQLELIPYMFVIGGREMETESVAVRDRIDGDLGSMKVAEAID 636 >gi|259500519|ref|ZP_05743421.1| threonine-tRNA ligase [Lactobacillus iners DSM 13335] gi|302191209|ref|ZP_07267463.1| threonyl-tRNA synthetase [Lactobacillus iners AB-1] gi|309807138|ref|ZP_07701115.1| threonine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|309810241|ref|ZP_07704086.1| threonine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|259167903|gb|EEW52398.1| threonine-tRNA ligase [Lactobacillus iners DSM 13335] gi|308166489|gb|EFO68691.1| threonine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|308169513|gb|EFO71561.1| threonine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] Length = 643 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 83/408 (20%), Positives = 162/408 (39%), Gaps = 39/408 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 379 TLNDGHTF-VELDQVQSEFAKILKLIMEVYRDFDITDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M + DD+ E A Y D+ + +L + Sbjct: 424 PKNTDKYFANDEMWERSQKMLKGAMDDLGLEYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F +++L ++ G DG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFNL----SYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N AH + ++ ++ L K+G D E++G + Sbjct: 533 KGAFPTW---LAPLQVKIIPVNNDAHGEYAQNVKDQ----LMKLGFRAEVDFRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 A P +++G + + V ++ + +E +L E ++ S Sbjct: 586 IREAQTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELS 633 >gi|296502926|ref|YP_003664626.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|296323978|gb|ADH06906.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 640 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|205373424|ref|ZP_03226228.1| prolyl-tRNA synthetase [Bacillus coahuilensis m4-4] Length = 84 Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%) Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 E +Y +L G +V DD E+ G +F +DL+G P++V VG K S+ VE K R TG Sbjct: 9 EDLYNQLKDQGLEVLLDDRIERAGVKFNDSDLIGIPVRVTVG-KQASEGNVECKDRRTGE 67 Query: 426 REDMSLEEVINY 437 +D+S+EE+ +Y Sbjct: 68 SKDVSIEELSSY 79 >gi|87124051|ref|ZP_01079901.1| threonyl-tRNA synthetase [Synechococcus sp. RS9917] gi|86168620|gb|EAQ69877.1| threonyl-tRNA synthetase [Synechococcus sp. RS9917] Length = 612 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 88/433 (20%), Positives = 159/433 (36%), Gaps = 93/433 (21%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ G + P + LW SG D Y + M Sbjct: 229 GLVFWHPRGARMRLLIEDFWRQAHFEGGYDLLYTPHVADIGLWKTSGHLDFYSESMFGPM 288 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 289 QVDEREYQLKPMNCPFHVLTYASRLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 347 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 DA+ F L PE +S E + + + Sbjct: 348 TQDDAHVFCL-PE------------------------------------QISDEILRILN 370 Query: 216 TGETQVFCSKDFMDFPIP----SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 ET + + DF ++ I E + DD A D+ + L ++L Sbjct: 371 LTET-ILSAFDFRNYEINLSTRPEKSIGDD----------------AVWDLATQGLIEAL 413 Query: 272 PENKRVSARGIEVGHIFYFGTK---------------------YSLP--MSATFKGADGK 308 ++ A ++ G ++G K ++LP + + ADG Sbjct: 414 --ERKGWAYKVDAGGGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFALDYVAADGS 471 Query: 309 DHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 M I G++ ++ ++ G W +AP +I L+ + D+V DA ++ Sbjct: 472 KQRPIMIHRAIFGSLERFFGIMTENYAGDFPFW---LAPEQIRLLPVT--DEVLADA-QQ 525 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + +L G D GE++G + + PL ++G+K V ++ R G Sbjct: 526 LSDQLRAAGIRATVDRSGERLGKLIRTGEQMKIPLLAVIGAKEAEQGSVSLRSRRDGDLG 585 Query: 428 DMSLEEVINYASH 440 ++ + +I AS Sbjct: 586 SVNRKALIEAASQ 598 >gi|108562547|ref|YP_626863.1| threonyl-tRNA synthetase [Helicobacter pylori HPAG1] gi|123247050|sp|Q1CV33|SYT_HELPH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|107836320|gb|ABF84189.1| threonyl-tRNA synthetase [Helicobacter pylori HPAG1] Length = 612 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSQALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|160895412|ref|ZP_02076181.1| hypothetical protein CLOL250_02969 [Clostridium sp. L2-50] gi|156862914|gb|EDO56345.1| hypothetical protein CLOL250_02969 [Clostridium sp. L2-50] Length = 478 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ + A+ K YV S+G+ + R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFGVQYTDANNKLQYVHQTSWGM-STRIIGAIIMVHGDDSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ +I I + + +++ A LS+ V DD + G +F+ ++ Sbjct: 284 VLPPRIAPTQVMIIPINQKKEGVLEKAQEVKAALSE-KFTVKLDDSNKNPGWKFSEQEMR 342 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+++ +G K + + I R + +SL+ + Sbjct: 343 GIPVRIEIGPKDIEAGQAVIVRRDNREKTVVSLDNI 378 >gi|144899402|emb|CAM76266.1| Threonyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 638 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 1/133 (0%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W G V + +R E+ P L LW SG D + + Sbjct: 257 LQEEAVGAVFWHQKGWALYRTVESYMRNRLEAENYQEVKTPQLVDFSLWEASGHADKFSE 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + ++++ + P + IFR IKSYR+LP + R E G+M Sbjct: 317 SMFTIKTQDERHLAVKPMNCPCHVQIFRQGIKSYRDLPLRMAEFGSCHRYEPSGALHGIM 376 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 377 RVRAFTQDDAHIF 389 >gi|285017864|ref|YP_003375575.1| threonyl-tRNA synthetase (threonine--tRNA ligase) protein [Xanthomonas albilineans GPE PC73] gi|283473082|emb|CBA15587.1| probable threonyl-trna synthetase (threonine--trna ligase) protein [Xanthomonas albilineans] Length = 634 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 87/441 (19%), Positives = 162/441 (36%), Gaps = 53/441 (12%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD + L L + + G+ W P G V +R+ G Sbjct: 232 YILRMEEADKRDHRKIAKALDLFH--LQEEGPGLVFWHPKGWSIWQVVEQYMRKVYRDNG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 290 YGEVRCPQILDVSLWQQSGHWDNYQDNMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F T + + L++ Sbjct: 349 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHIF-CTEQQIEAEVTAFHRQALKV 407 Query: 185 FHRLGLKSIPMRAESGP---IGGDLS---HEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + G I ++ P +G D + E + A G C ++ + P Sbjct: 408 YTDFGFDDIQIKIALRPEKRLGEDATWDKAEAALRAALGA----CGVEWQELPGEG---- 459 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 A Y + H L D++ ++ ++ G +Y Sbjct: 460 ---------------AFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLGAEYVDEH 501 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 S K H V + +G+M ++ H G ++P +AP + ++NI Sbjct: 502 SQ-------KRHPVMLHRAIVGSMERFIGILIEHHAG---VFPAWLAPVQAMVMNITDAQ 551 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D+ K+ L+ G + D E+IG + L P ++VG + + + + Sbjct: 552 ADYVDSVRKL---LANQGFRIEADLRNEKIGYKIREHTLQRVPYLLVVGDREKENGAIAV 608 Query: 419 KHRLTGIREDMSLEEVINYAS 439 + R +G ED+ V ++A Sbjct: 609 RTR-SG--EDLGTMSVADFAE 626 >gi|302552824|ref|ZP_07305166.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302470442|gb|EFL33535.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] Length = 416 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + +RE + R G + P L +L+ SG +D Y ++M Sbjct: 33 GLPYWLPDGAIVRHTLEEYVREAERRAGYRHVYSPVLGKRELYEISGHWDHYSEDMFPPM 92 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + ++ P+ I+RS SYR LP ++ +R EL G+ R R Sbjct: 93 ELGAEQVLLRPSLCPHHALIYRSRSHSYRELPLRMAELGGMYRSELSGVLGGLTRVRAIT 152 Query: 157 MKDAYSF 163 + DA+ F Sbjct: 153 LNDAHIF 159 >gi|229044114|ref|ZP_04191800.1| Threonyl-tRNA synthetase [Bacillus cereus AH676] gi|229109806|ref|ZP_04239391.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228673651|gb|EEL28910.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228725227|gb|EEL76498.1| Threonyl-tRNA synthetase [Bacillus cereus AH676] Length = 640 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|229144961|ref|ZP_04273357.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228638483|gb|EEK94917.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24] Length = 640 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|240143521|ref|ZP_04742122.1| threonine--tRNA ligase [Roseburia intestinalis L1-82] gi|257204557|gb|EEV02842.1| threonine--tRNA ligase [Roseburia intestinalis L1-82] gi|291540396|emb|CBL13507.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Roseburia intestinalis XB6B4] Length = 591 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 2/142 (1%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +LP G + I+ ++ + G + + P + + +L+ SG +D Y + M Sbjct: 201 RGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMTPCVGTVNLYKTSGHWDHYKENMFPA 260 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P + I+ + + SY++LP +I FR E G+ R R F Sbjct: 261 MEVEGESFVLRPMNCPHHMMIYANRMHSYKDLPIRIGEIAHDFRFEASGTLKGIERGRHF 320 Query: 156 LMKDAYSFDLTPEGSKHSYNKM 177 DA+ F +TPE + + K+ Sbjct: 321 CQNDAHLF-VTPEQIESEFAKV 341 >gi|328947096|ref|YP_004364433.1| threonyl-tRNA synthetase [Treponema succinifaciens DSM 2489] gi|328447420|gb|AEB13136.1| threonyl-tRNA synthetase [Treponema succinifaciens DSM 2489] Length = 585 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 2/121 (1%) Query: 42 WLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND 101 W P G + +RE+ + G +E++ P + LW SG + Y K M + + Sbjct: 206 WHPNGWTMYVTLQDYMREKIRKDGYMEVNTPAIMPRSLWERSGHWGHYQKNMF-VTESEK 264 Query: 102 KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDA 160 + P + +IF S ++SY++LP + R+E G+MR R F+ DA Sbjct: 265 RMFAIKPMNCPGALEIFNSRVRSYKDLPLRLAEFGHCVRNEPSGTLHGIMRVRGFVQDDA 324 Query: 161 Y 161 + Sbjct: 325 H 325 >gi|317008795|gb|ADU79375.1| threonyl-tRNA synthetase [Helicobacter pylori India7] Length = 612 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|309803316|ref|ZP_07697413.1| threonine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|308164824|gb|EFO67074.1| threonine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] Length = 643 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 83/408 (20%), Positives = 162/408 (39%), Gaps = 39/408 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 379 TLNDGHTF-VELDQVQSEFAKILKLIMEVYRDFDITDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M + DD+ E A Y D+ + +L + Sbjct: 424 PKNTDKYFANDEMWERSQKMLKGAMDDLGLEYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F +++L ++ G DG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFNL----SYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N AH + ++ ++ L K+G D E++G + Sbjct: 533 KGAFPTW---LAPLQVKIIPVNNDAHGEYAQNVKDQ----LMKLGFRAEVDFRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 A P +++G + + V ++ + +E +L E ++ S Sbjct: 586 IREAQTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELS 633 >gi|302389804|ref|YP_003825625.1| prolyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] gi|302200432|gb|ADL08002.1| prolyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] Length = 479 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 3/163 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G G +S TF DGK YV S+G+ + R++ A+I + D +G+ Sbjct: 223 GKALQAGTSHNLGQHFSKVFDITFLDQDGKLKYVWQTSWGV-STRLIGAIIMTHGDDRGL 281 Query: 339 IWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVAD 396 P VAP ++ ++ I + + +Y L V DD E G +F + Sbjct: 282 KLPPRVAPIQVVIVPIFGQQKEEILEKSRSLYQTLKNNNFRVELDDRDEYTPGWKFNEWE 341 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 + G P+++ +G K ++ ++V + R TG + + ++I Y + Sbjct: 342 MKGVPVRLEIGPKDLAQNQVLLVRRDTGEKISVKEADLIPYLT 384 >gi|261838989|gb|ACX98754.1| threonyl-tRNA synthetase [Helicobacter pylori 52] Length = 612 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|300361194|ref|ZP_07057371.1| threonine--tRNA ligase [Lactobacillus gasseri JV-V03] gi|300353813|gb|EFJ69684.1| threonine--tRNA ligase [Lactobacillus gasseri JV-V03] Length = 643 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 86/404 (21%), Positives = 160/404 (39%), Gaps = 39/404 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G V I +++ G + P L + D + SG + Y +M Sbjct: 259 GLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNVDAYKTSGHWAHYRDDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 379 TLNDGHTF-VALDQIREEFAKVLKLIMDVYKDFDITDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M S D + L+ + E A Y D+ + +L + Sbjct: 424 PKNTDKYYANDEMWEKSQSMLKAAMDDLGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L T+ G DG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFGL----TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N +AH +K+ L+K G D E++G + Sbjct: 533 KGAFPTW---LAPVQAEIIPVNEEAHGAY----ADKVREELAKRGFRAEVDHRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + P +++G ++ + V ++ T + SL++ I Sbjct: 586 IRESQTQKVPYTLVLGDDEMNANGVNVRRYGTEEQISKSLDDFI 629 >gi|312871712|ref|ZP_07731800.1| threonine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|312872982|ref|ZP_07733042.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|312874225|ref|ZP_07734259.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|315653646|ref|ZP_07906566.1| threonine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|325912186|ref|ZP_08174584.1| threonine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|329920107|ref|ZP_08276938.1| threonine--tRNA ligase [Lactobacillus iners SPIN 1401G] gi|311090295|gb|EFQ48705.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|311091504|gb|EFQ49888.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|311092654|gb|EFQ51010.1| threonine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|315489008|gb|EFU78650.1| threonine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|325476136|gb|EGC79304.1| threonine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|328936561|gb|EGG33005.1| threonine--tRNA ligase [Lactobacillus iners SPIN 1401G] Length = 643 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 83/408 (20%), Positives = 162/408 (39%), Gaps = 39/408 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 379 TLNDGHTF-VELDQVQSEFAKILKLIMEVYRDFDITDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M + DD+ E A Y D+ + +L + Sbjct: 424 PKNTDKYFANDEMWERSQKMLKGAMDDLGLEYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F +++L ++ G DG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFNL----SYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N AH + ++ ++ L K+G D E++G + Sbjct: 533 KGAFPTW---LAPLQVKIIPVNNDAHGEYAQNVKDQ----LMKLGFRAEVDFRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 A P +++G + + V ++ + +E +L E ++ S Sbjct: 586 IREAQTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELS 633 >gi|218897336|ref|YP_002445747.1| threonyl-tRNA synthetase [Bacillus cereus G9842] gi|218542902|gb|ACK95296.1| threonyl-tRNA synthetase [Bacillus cereus G9842] Length = 640 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|228965357|ref|ZP_04126449.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794347|gb|EEM41861.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] Length = 640 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|170016922|ref|YP_001727841.1| threonyl-tRNA synthetase [Leuconostoc citreum KM20] gi|238688955|sp|B1MXZ5|SYT_LEUCK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169803779|gb|ACA82397.1| Threonyl-tRNA synthetase [Leuconostoc citreum KM20] Length = 653 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 82/393 (20%), Positives = 153/393 (38%), Gaps = 48/393 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G V I +++ G + P L + +L+ SG +D Y ++M Sbjct: 266 GLPVWLPNGATIRRQVERYIIDKELANGYQHVYTPVLSNLNLYKTSGHWDHYREDMFPPM 325 Query: 98 DRNDKAMI-----YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D + + P+H +M +F +SYR LP ++ + R E G+ R Sbjct: 326 DMGEGEFLELRPMNCPSH--IM--VFNHKPRSYRELPIRIAELGMMHRYEKSGALTGLSR 381 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE + D ++F + PE + + + + ++ + R LS+ Sbjct: 382 VREMTLNDGHTF-VEPEKLEEEFKSILTMMMGVYRDFNITDYRFR---------LSYR-- 429 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDS 270 D T+ + D M ++ D + L+ E A Y DV + + Sbjct: 430 ---DPENTEKYFDDDDMWEKSQAQLKRAMDDLKLDYYEAEGEAAFYGPKLDVQTKT---A 483 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAV 328 L + +S ++ F +++L T+ GADG+D++ V + +G M A Sbjct: 484 LGSEETMSTIQLD----FLLPERFNL----TYIGADGQDNHRPVMLHRGIVGTMERFTAY 535 Query: 329 IESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + + G W ++P ++ +I N+ AH D I A+L G + Sbjct: 536 LIEMYKGAFPTW---LSPLQVQIIPVNLGAHGDYAND----IQAQLQAAGLRAHVETKDA 588 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++G A P +++G V V ++ Sbjct: 589 KMGYLIREAQTNKIPYTLVLGDSEVDGQTVTVR 621 >gi|1565235|emb|CAB02510.1| Threonyl tRNA Synthetase [Bacillus subtilis subsp. subtilis str. 168] Length = 601 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP GQ + + RE Q G E+ P + + LW +SG +D Y Sbjct: 220 MFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTPFMMNQRLWEQSGHWDHY- 278 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 ++ + ++ +D P + IF++ + SYR+LP + R E G+ Sbjct: 279 RDNMYFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNGM 338 Query: 150 MRSREFLMKDAYSF 163 +R R F DA+ F Sbjct: 339 LRVRTFCQDDAHIF 352 >gi|332672963|gb|AEE69780.1| threonine--tRNA ligase [Helicobacter pylori 83] Length = 612 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|262044121|ref|ZP_06017196.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038520|gb|EEW39716.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 622 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 85/411 (20%), Positives = 151/411 (36%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N ++ G + I ++ + P IG D + Sbjct: 355 RVRGFTQDDAHIF-CTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 413 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 D E + + + + P + + A Y + L Sbjct: 414 ------WDRAEADLAVALEENNIPFEYQLGE--------------GAFYGPKIEF---TL 450 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + +SLP +SA + G + + M I G++ Sbjct: 451 YDCLD-------RAWQCGTV---QLDFSLPQRLSAFYVGENNERQVPVMIHRAILGSLER 500 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +P +AP ++ ++NI + ++ +L G V D Sbjct: 501 FIGILTEEFAG---FFPTWIAPVQVVVMNITDSQA---EYVNELTRKLQNAGIRVKADLR 554 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++ G K V KV ++ R M EVI Sbjct: 555 NEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDENEVI 605 >gi|153002179|ref|YP_001367860.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS185] gi|151366797|gb|ABS09797.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS185] Length = 398 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 2/131 (1%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 + G+ W P G ++ IR R G E++ P +LW SG D + + M Sbjct: 19 QAPGMIFWHPNGWALFRDIQEHIRRVYRRNGFEEVNTPVFMKKELWQTSGHMDMFAENMF 78 Query: 95 RLADR-NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 + N + P +F+ + S+R+LP ++ L R+E G +R+ Sbjct: 79 FGGGKENIDEYVLKPMSCPAHILLFKRGVHSHRDLPLRLFEFGLVHRNESSGSLNGCLRA 138 Query: 153 REFLMKDAYSF 163 R+F DA+ F Sbjct: 139 RQFTQDDAHVF 149 >gi|228900981|ref|ZP_04065194.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228858679|gb|EEN03126.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 640 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|67475342|ref|XP_653365.1| threonyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS] gi|56470308|gb|EAL47979.1| threonyl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS] Length = 676 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 8/161 (4%) Query: 10 ILQENPRDAEIAS---HKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L+E + AE A H+L+ R H S G WLP G + + + ++R E Sbjct: 266 LLKEYIKRAEEADKRDHRLIGRQQDLFFFHVLSPGSCFWLPHGTRIYNKLVELMRSEYRV 325 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + + LW SG + Y +M + + P + +F S + Sbjct: 326 LGYQEVITPNIFLSTLWETSGHWQHYKDDMFSF-ECEKQTFALKPMNCPGHCVMFASKKR 384 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR LP + + + R+EL G+ R R F+ D++ F Sbjct: 385 SYRELPLRYAEFGVLHRNELTGALHGLTRVRRFVQDDSHIF 425 >gi|303257521|ref|ZP_07343533.1| threonine--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|331000214|ref|ZP_08323898.1| threonine--tRNA ligase [Parasutterella excrementihominis YIT 11859] gi|302859491|gb|EFL82570.1| threonine--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|329572380|gb|EGG54033.1| threonine--tRNA ligase [Parasutterella excrementihominis YIT 11859] Length = 641 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 94/428 (21%), Positives = 163/428 (38%), Gaps = 60/428 (14%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 G+I H++G W V +R E+ P L LW +SG + Y Sbjct: 261 GLIFWHARGWALW--------QQVEQYMRRVYQDNDYQEVKAPQLLDRSLWEKSGHWSKY 312 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M N + P + IF S ++SYR+LP + + R+E G Sbjct: 313 KENMFTTESEN-RYYALKPMNCPGHIQIFNSAVRSYRDLPIRYGEFGACHRNEPSGSLHG 371 Query: 149 VMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IG 203 +MR R F D + F + +Y K+ +++ G I + + P IG Sbjct: 372 LMRVRGFTQDDGHIFCTEDQILSECTAYTKLV---QKVYADYGFTDISYKIATRPEKRIG 428 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 D + D E K MD + + +D I+ A Y + H Sbjct: 429 DDATW------DKAE------KALMD-ALDASGIKYD-------ILPGEGAFYGPKIEYH 468 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATF-KGADGKDHYVQMGSYGIG 320 L DSL RG + G I + +P + A + ++G+ V + +G Sbjct: 469 ---LRDSL-------GRGWQCGTI---QVDFQMPARLGAEYVTESNGRATPVMLHRAIVG 515 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ + G+ W +AP ++++ NI DQ D +++ + L K G Sbjct: 516 SLERFIGMLLEHYAGQLPPW---LAPVQVAVANI-TDDQA--DYAKEVVSMLKKAGLRAE 569 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 D +I + L P ++VG+K ++ KV ++ R MS+E+ I Sbjct: 570 ADLRNGKITYKIRELSLQKLPYILVVGAKEKAEGKVAVRVRGGKDLGAMSVEDFIKLVQE 629 Query: 441 RFSNNRPV 448 + R V Sbjct: 630 DVATRRNV 637 >gi|291486342|dbj|BAI87417.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] Length = 638 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP GQ + + RE Q G E+ P + + LW +SG +D Y Sbjct: 257 MFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYNEVRTPFMMNQRLWEQSGHWDHY- 315 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 ++ + ++ +D P + IF++ + SYR+LP + R E G+ Sbjct: 316 RDNMYFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNGM 375 Query: 150 MRSREFLMKDAYSF 163 +R R F DA+ F Sbjct: 376 LRVRTFCQDDAHIF 389 >gi|58582810|ref|YP_201826.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58427404|gb|AAW76441.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 671 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 78/394 (19%), Positives = 141/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 293 LQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQD 352 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 353 AMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 411 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F L + + L ++ G I ++ P +G D + Sbjct: 412 RVRGFTQDDGHVFCLESQ-IESEVTAFHQQALAVYTAFGFDDIQIKIALRPEKRLGDDAT 470 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A V C ++ + P A Y + H L Sbjct: 471 WDKAEAALRSALGV-CGVEWQELPGEG-------------------AFYGPKIEYH---L 507 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 508 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFIG 560 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G +P +AP ++ + NI DA K L+ G V D E+ Sbjct: 561 ILIEHHAGA---FPSWLAPVQVVVANITDAQADYVDAVRKT---LANQGFRVSADLRNEK 614 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++VG + + V ++ R Sbjct: 615 IGYKIREHTLQRVPYLLVVGDREKENGAVAVRTR 648 >gi|23016433|ref|ZP_00056189.1| COG0441: Threonyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 621 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 8/161 (4%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIHQHSKGIYS--WLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + HQ + S W G V + +R Sbjct: 216 YLHMLEE----AEKRDHRRLGREMELFHQQEEAAGSVFWHKKGWTLYRAVESYMRRRLEA 271 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P L LW SG D + + M + ++++ + P + IFR IK Sbjct: 272 NDYQEVKTPQLVDFSLWEASGHADKFSESMFTIRTQDERHLAVKPMNCPCHVQIFRQGIK 331 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP + R E G+MR R F DA+ F Sbjct: 332 SYRDLPLRMAEFGSCHRYEPSGALHGIMRVRAFTQDDAHIF 372 >gi|134095006|ref|YP_001100081.1| threonyl-tRNA synthetase [Herminiimonas arsenicoxydans] gi|166223347|sp|A4G619|SYT_HERAR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|133738909|emb|CAL61956.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Herminiimonas arsenicoxydans] Length = 635 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 9/161 (5%) Query: 7 FLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + + G+ W P G V +R Sbjct: 231 YLTMLEE----AEKRDHRKLGRALDLFHFQEEAPGLIFWHPKGWTVWQQVEQYMRRVYQD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW +SG +++Y + M N ++ P + IF S ++ Sbjct: 287 NGYQEVKAPQILDRSLWEKSGHWENYKENMFTTESEN-RSYALKPMNCPGHVQIFASDLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR LP + + R+E G+MR R F D + F Sbjct: 346 SYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIF 386 >gi|209695239|ref|YP_002263168.1| threonyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] gi|208009191|emb|CAQ79445.1| threonyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] Length = 642 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 150/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G + +RE+ E+ P + LW SG +D Y + Sbjct: 256 MQQEAPGMVFWHHNGWTIFRELEVFVREKLTEYDYQEVKGPLMMERVLWERSGHWDKYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGACHRNEPSGALHGIM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + + + Y + G ++I ++ + P +G D Sbjct: 375 RVRGFTQDDAHIFCTEAQVQDEVKSCIEMVY-DTYTTFGFENIVVKLSTRPEQRVGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + S N ++ I E A Y + L Sbjct: 432 ----EMWDKAEAD-------LQLALESMNIAYE-------IQEGEGAFYGPKIEF---TL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + ++LP + AT+ G D + H M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDFALPERLGATYVGEDNERHTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++ I D ++I +L K G V D Sbjct: 521 FIGILIEDYAG---FFPTWLAPEQAIVMGITDKQA---DYVQEIAKKLQKNGFRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 575 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 611 >gi|207109933|ref|ZP_03244095.1| prolyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1] Length = 132 Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 36/52 (69%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + +EVGHIF G Y+ + A+F +GK+ + +MG YGIG R+++A++E+ Sbjct: 78 KSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSAILET 129 >gi|109947952|ref|YP_665180.1| threonyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba] gi|123362536|sp|Q17VZ5|SYT_HELAH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|109715173|emb|CAK00181.1| thrS [Helicobacter acinonychis str. Sheeba] Length = 612 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|325919878|ref|ZP_08181868.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] gi|325549662|gb|EGD20526.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] Length = 634 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 76/394 (19%), Positives = 142/394 (36%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 256 LQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 316 AMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F L + + L ++ G I ++ P +G D++ Sbjct: 375 RVRGFTQDDGHVFCLESQ-IEAEVTAFHQQALAVYTAFGFDDIEIKIALRPEKRLGDDVT 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A V C ++ + P A Y + H L Sbjct: 434 WDKAEAALRSALGV-CGVEWQELPGEG-------------------AFYGPKIEYH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 471 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDEHSQ-------KKHPVMLHRAIVGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G +P +AP ++ + NI D + + L+ G V D E+ Sbjct: 524 ILIEHHAGA---FPSWLAPVQVVVANIT---DAQADYVDSVRKTLANQGFRVNADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++VG + + V ++ R Sbjct: 578 IGYKIREHTLQRVPYLLVVGDREKENGAVAVRTR 611 >gi|188577599|ref|YP_001914528.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188522051|gb|ACD59996.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 649 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 78/394 (19%), Positives = 141/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 271 LQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQD 330 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 331 AMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 389 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F L + + L ++ G I ++ P +G D + Sbjct: 390 RVRGFTQDDGHVFCLESQ-IESEVTAFHQQALAVYTAFGFDDIQIKIALRPEKRLGDDAT 448 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A V C ++ + P A Y + H L Sbjct: 449 WDKAEAALRSALGV-CGVEWQELPGEG-------------------AFYGPKIEYH---L 485 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 486 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFIG 538 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G +P +AP ++ + NI DA K L+ G V D E+ Sbjct: 539 ILIEHHAGA---FPSWLAPVQVVVANITDAQADYVDAVRKT---LANQGFRVSADLRNEK 592 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++VG + + V ++ R Sbjct: 593 IGYKIREHTLQRVPYLLVVGDREKENGAVAVRTR 626 >gi|317010401|gb|ADU84148.1| threonyl-tRNA synthetase [Helicobacter pylori SouthAfrica7] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|261837575|gb|ACX97341.1| threonyl-tRNA synthetase [Helicobacter pylori 51] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|149185120|ref|ZP_01863437.1| threonyl-tRNA synthetase [Erythrobacter sp. SD-21] gi|148831231|gb|EDL49665.1| threonyl-tRNA synthetase [Erythrobacter sp. SD-21] Length = 671 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 96/439 (21%), Positives = 163/439 (37%), Gaps = 81/439 (18%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + + A +R + + G E+ P L W SG + Y + Sbjct: 265 LQEEAHGSVFWHPNGYRIWRELEAYMRRKMDGAGYREIKTPQLMDVRQWTASGHWGKYAE 324 Query: 92 EML-------------------RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 M ++AD D M P + +F+ I SYR+LP Sbjct: 325 NMFAVPDIVPDVDDSGAASAHPKVADDAD-WMAIKPMNCPAHVLVFKQGITSYRDLPIRL 383 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 ++ R+E G+MR R+F DA+ F V +R F +L Sbjct: 384 GEMGCCHRNEPHGALHGLMRVRQFTQDDAHIF---------CSESQVVEEVRAFCKL--- 431 Query: 192 SIPMRAESGPIGGDLSHEF-IVLADTGETQVFCSKDFMDFPIPSENTDFDDI-ISLNSIV 249 AES + D F I LA E ++ + D+D L V Sbjct: 432 -----AES--VYKDFGFTFAIKLALRPEKRL------------GSDADWDKAEQELRDAV 472 Query: 250 EQWTAPYAATSDVHNEKL-FDSLPENKRVSARGIE------VGHIFYFGT---KYSLP-- 297 E+ + + NE+ ++ LP A +E +G + GT LP Sbjct: 473 EE--------AGMMNEEFGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLPER 524 Query: 298 MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A++ G DG+ H M I G+ ++ + G+ +W +AP + + I + Sbjct: 525 LDASYVGEDGEKHRPVMLHRAIFGSYERFIGILIEHYAGRMPVW---LAPTQAVVATIVS 581 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ A+L G V D E+I + P ++VG++ + V Sbjct: 582 D---ADDYAKEAVAKLEAAGIRVASDLRNEKINYKVREHSHAKVPHLLVVGNREAEEGTV 638 Query: 417 EIKHRLTGIREDMSLEEVI 435 ++ ++ M LEE I Sbjct: 639 AVRTLGQQHQKVMPLEEAI 657 >gi|322383766|ref|ZP_08057517.1| threonyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151978|gb|EFX44921.1| threonyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 649 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 75/397 (18%), Positives = 155/397 (39%), Gaps = 47/397 (11%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + I + + + G + P L + DL+ SG ++ Y ++M Sbjct: 263 QGLPLWLPNGATIRRTLERYIVDLEEKLGYQHVYTPVLANVDLYKTSGHWEHYREDMFPP 322 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P + ++++ + SYR+LP ++ R E+ G+ R R Sbjct: 323 MQLDNEELVLRPMNCPHHMMVYKNELHSYRDLPIRIAELGTMHRYEMSGALTGLHRVRAM 382 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F P+ K + ++ +++ G+ R LS+ D Sbjct: 383 TLNDAHIF-CRPDQIKEEFARVITLIRQVYADFGITDYRFR---------LSYR-----D 427 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY---AATSDVHNEKL----F 268 +T + D M + + L +VE+ PY + + KL Sbjct: 428 PQDTDKYFPNDEM-WEMSQR--------MLKEVVEELRLPYYEAEGEAAFYGPKLDVQIK 478 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 +L + + +S ++ F ++ L + G DG+ H + GI M + A Sbjct: 479 TALKKEETLSTAQLD----FLLPERFEL----EYVGEDGQKHRPVVIHRGIVSTMERMTA 530 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 + + G W + P + ++ + + D +++ RL + G V D E+ Sbjct: 531 FLLENFAGALPTW---LCPVQAKILPVSS---AFNDYAKEMEDRLKQAGIRVAADLRNEK 584 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +G + + L P ++VG ++ R G Sbjct: 585 LGYKIRESQLEKVPFMLVVGENEKQSGSFSVRRRGEG 621 >gi|42526600|ref|NP_971698.1| threonyl-tRNA synthetase [Treponema denticola ATCC 35405] gi|73919840|sp|Q73NR2|SYT_TREDE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|41816793|gb|AAS11579.1| threonyl-tRNA synthetase [Treponema denticola ATCC 35405] Length = 585 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 10/190 (5%) Query: 5 KYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H+ + + I + + G W P G + +R+ Sbjct: 172 KEYLAMLEE----AEKRDHRRIGKAMNLFHIDEENPGQIFWHPKGWTLYLTIQNYVRKRI 227 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G +E+ P + LW SG + Y KE + + + + P + +IF+ Sbjct: 228 KEDGYLEVHTPFVMPRSLWERSGHWAKY-KENMFITESEKRLFALKPMNCPGHVEIFKQG 286 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY++LP + R+E G+MR R F+ DA+ F T E +K Sbjct: 287 IKSYKDLPLRLAEFGSCTRNEPSGSLHGIMRIRGFVQDDAHIF-CTEEQISSEVSKFCAL 345 Query: 181 YLRIFHRLGL 190 R++ G Sbjct: 346 LKRMYADFGF 355 >gi|321313312|ref|YP_004205599.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5] gi|320019586|gb|ADV94572.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5] Length = 638 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP GQ + + RE Q G E+ P + + LW +SG +D Y Sbjct: 257 MFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTPFMMNQRLWEQSGHWDHY- 315 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 ++ + ++ +D P + IF++ + SYR+LP + R E G+ Sbjct: 316 RDNMYFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNGM 375 Query: 150 MRSREFLMKDAYSF 163 +R R F DA+ F Sbjct: 376 LRVRTFCQDDAHIF 389 >gi|257459979|ref|ZP_05625083.1| threonyl-tRNA synthetase [Campylobacter gracilis RM3268] gi|257442420|gb|EEV17559.1| threonyl-tRNA synthetase [Campylobacter gracilis RM3268] Length = 607 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 81/417 (19%), Positives = 159/417 (38%), Gaps = 47/417 (11%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 Q G+ WLP G + + + + + G + P + +D W SG Y +Y KE Sbjct: 228 EQIGAGLPIWLPAGTRMRIKLEGRLYRQLRKRGYEPVRGPEILKSDAWKISGHYSNY-KE 286 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + ++ P + +++S I+SYR+LP F + + R E G+ R Sbjct: 287 NMYFTTIEEQEYGIKPMNCVGHIKVYQSEIRSYRDLPLKFCEYGVVHRHEKSGVLHGLFR 346 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKM-FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 REF DA+ F + + ++ Y + FV L M+A E+ Sbjct: 347 VREFTQDDAHLFVMPSQIKENVYEILDFVELL------------MKA--------FGFEY 386 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 + T + + D + D+ + E A Y D+ K+ D+ Sbjct: 387 ELEISTKPQKAVGDDEVWDIATKALKDALDEKGLKYGLDEGGGAFYGPKIDI---KITDA 443 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD---GKDHYVQMGSYGIGAMRVVAA 327 L R + G + ++LP D K V + +G+ Sbjct: 444 L-------GRKWQCGTV---QVDFNLPARFELGYIDENNEKKQPVMLHRAILGSFERFVG 493 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ G+ W + P ++S++ I +AH ++ + R + + ++ D E Sbjct: 494 ILLEHTAGELPFW---ICPTQVSIVPIGEAHASYAKEILNLL--RAADIDGEIL--DRNE 546 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 + + A+ PL +++G VS V ++ R + ++ L+E +N+ + + Sbjct: 547 TLNKRIRTAEKQKVPLIIVLGDNEVSARSVALRDRRAREQRNLGLDEFLNFVKAKLN 603 >gi|313673284|ref|YP_004051395.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312940040|gb|ADR19232.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 640 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 1/133 (0%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 G + G+ W+P G K + R E + G + P + ++LW SG D Y Sbjct: 252 GTFDEIGSGLICWMPKGAKVRATIEEFWRREHFKNGYDLLYTPHIGKSNLWQTSGHLDFY 311 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M D + P + I++S +SYR+LP + ++ +R E G Sbjct: 312 SENMYSPMDIEGQNYYIKPMNCPFHIMIYKSKNRSYRDLPLRWAELGTVYRYERSGVLHG 371 Query: 149 VMRSREFLMKDAY 161 ++R R F DA+ Sbjct: 372 LLRVRGFTQDDAH 384 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 6/115 (5%) Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G++ V+ + G W +AP +I ++NI D CE++Y RL G Sbjct: 514 LGSLERFFGVLIEHYAGAFPFW---LAPVQIKIMNISDEQA---DYCEQLYRRLKAEGFR 567 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 V D E+IG + A L P +++G++ + V ++ R + ++ E Sbjct: 568 VEMDLRNEKIGYKIREAQLFKVPHMIVIGNQEKEKNHVSVRLRNGETKNNLDFSE 622 >gi|237745470|ref|ZP_04575950.1| threonyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] gi|229376821|gb|EEO26912.1| threonyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] Length = 650 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 9/161 (5%) Query: 7 FLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R+ + H + G+ W P G V +R+ Sbjct: 246 YLHMLEE----AEKRDHRRLGRSLDLFHFQDEAPGLIFWHPKGWTIWQQVEQYMRKVYRD 301 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW +SG +D+Y + M N + P + I+RS++ Sbjct: 302 NGYQEVKGPQILDRSLWEKSGHWDNYKENMFTTESEN-RVYAIKPMNCPGHVQIYRSNLH 360 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR LP + + R+E G+MR R F D + F Sbjct: 361 SYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIF 401 >gi|221311719|ref|ZP_03593566.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221316045|ref|ZP_03597850.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320956|ref|ZP_03602250.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi|221325241|ref|ZP_03606535.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|255767793|ref|NP_391636.2| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|254763338|sp|P18256|SYT2_BACSU RecName: Full=Threonyl-tRNA synthetase 2; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225185421|emb|CAB15783.2| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] Length = 638 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP GQ + + RE Q G E+ P + + LW +SG +D Y Sbjct: 257 MFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTPFMMNQRLWEQSGHWDHY- 315 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 ++ + ++ +D P + IF++ + SYR+LP + R E G+ Sbjct: 316 RDNMYFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNGM 375 Query: 150 MRSREFLMKDAYSF 163 +R R F DA+ F Sbjct: 376 LRVRTFCQDDAHIF 389 >gi|91226476|ref|ZP_01261225.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|91189108|gb|EAS75389.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01] Length = 410 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR + + G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 376 RVRGFTQDDAHIF 388 >gi|320093816|ref|ZP_08025661.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] gi|319979249|gb|EFW10747.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] Length = 669 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 81/395 (20%), Positives = 150/395 (37%), Gaps = 31/395 (7%) Query: 57 IREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTD 116 +RE G + P + A+L+ SG Y M D +A + + Sbjct: 292 VREAHIANGFQYVGTPHISKAELFHTSGHLPYYADGMFPPMDDEGQAYYLKAMNCPMHNL 351 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP F++ +R+E G+ R R D++S+ TPE + Sbjct: 352 IFRSRGRSYRELPLRFFEFGTVYRNEKSGVLQGLTRVRSITQDDSHSY-CTPEQAPGEVR 410 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + L + G++ + + G +FI G + + + I +E Sbjct: 411 HLLTFVLTLLKDFGMEDFYLEVSTRDEDGAKKDKFI-----GSDEQWADATRILADIAAE 465 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + + ++ A Y V + D++ ++S + FG +Y+ Sbjct: 466 CAQENGLRVVDD--PGGAAFYGPKISVQAK---DAIRRTWQMSTIQYDFNQPHRFGLEYT 520 Query: 296 LPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 ADG H V + S GA+ V+ + G W +AP ++ L+ + Sbjct: 521 --------AADGARHEPVMIHSAKFGAIERFIGVLTEHYAGAFPAW---LAPVQVRLVPV 569 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + D E++ A+L + G V D ++ G + A P +I G + Sbjct: 570 AS---AFDDYVEEVAAKLRERGIRVETDLSDDRFGKKIRNAAKEKVPFTLIAGGEDAEAG 626 Query: 415 KVEIKHR----LTGIREDMSLEEVINYASHRFSNN 445 V + R GI D ++E + + + R +++ Sbjct: 627 AVSFRLRDGSQHNGIPVDRAVELIARHVASRANHD 661 >gi|206900126|ref|YP_002250745.1| threonyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] gi|206739229|gb|ACI18287.1| threonyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] Length = 638 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G + R+E + G + + P L A+LW SG +D+Y + M L Sbjct: 258 GLIFYPPKGAMLRLIIEEFERKEHLKRGYLPVITPHLMQAELWKRSGHWDNYRENMFFL- 316 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFL 156 DK P + I+ S ++SYR+LP F+++ +R E +G+ R+R F Sbjct: 317 QVEDKDYAVKPMNCPGHILIYNSKVRSYRDLPLRFFEMGTVYRYERSGVLYGLERARGFT 376 Query: 157 MKDAYSF 163 DA+ F Sbjct: 377 QDDAHIF 383 >gi|46200191|ref|YP_005858.1| prolyl-tRNA synthetase [Thermus thermophilus HB27] gi|81830546|sp|Q72GF9|SYP_THET2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|46197819|gb|AAS82231.1| prolyl-tRNA synthetase [Thermus thermophilus HB27] Length = 477 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 5/156 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G ++ F+ D + YV S+G+ + R + A+I + D +G+ Sbjct: 221 GKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGL-SWRFIGAIIMTHGDDRGL 279 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVA 395 + P +AP ++ ++ I + R +A + + L G V DD + G +F Sbjct: 280 VLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALQAKGLRVHLDDRDQHTPGYKFHEW 339 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 +L G P +V +G K + + + RL G +E + L Sbjct: 340 ELKGVPFRVELGPKDLEQGQAVLASRLGG-KETLPL 374 >gi|143764|gb|AAA22863.1| threonyl-tRNA synthetase (thrS2) (EC 6.1.1.3) [Bacillus subtilis] Length = 638 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP GQ + + RE Q G E+ P + + LW +SG +D Y Sbjct: 257 MFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTPFMMNQRLWEQSGHWDHY- 315 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 ++ + ++ +D P + IF++ + SYR+LP + R E G+ Sbjct: 316 RDNMYFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNGM 375 Query: 150 MRSREFLMKDAYSF 163 +R R F DA+ F Sbjct: 376 LRVRTFCQDDAHIF 389 >gi|307636813|gb|ADN79263.1| threonyl tRNA sythetase [Helicobacter pylori 908] gi|325995402|gb|ADZ50807.1| Threonyl-tRNA synthetase [Helicobacter pylori 2018] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|297379344|gb|ADI34231.1| threonyl-tRNA synthetase [Helicobacter pylori v225d] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|315586098|gb|ADU40479.1| threonine--tRNA ligase [Helicobacter pylori 35A] gi|317179509|dbj|BAJ57297.1| threonyl-tRNA synthetase [Helicobacter pylori F30] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|217034632|ref|ZP_03440039.1| hypothetical protein HP9810_881g25 [Helicobacter pylori 98-10] gi|216942927|gb|EEC22414.1| hypothetical protein HP9810_881g25 [Helicobacter pylori 98-10] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|294655282|ref|XP_002770111.1| DEHA2B10252p [Debaryomyces hansenii CBS767] gi|199429831|emb|CAR65481.1| DEHA2B10252p [Debaryomyces hansenii] Length = 733 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 ++ S G WLP G + + + ++R+E + G E+ P + ++ LW SG + +Y + Sbjct: 337 FNEMSPGSAFWLPHGTRIYNTLTDLMRKEYRQRGYDEVITPNMYNSKLWETSGHWGNYKE 396 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F+S +SYR LP+ + R+EL G+ Sbjct: 397 NMFSF-EVEKETFGLKPMNCPGHCLMFKSRERSYRELPWRVADFGVIHRNELSGALSGLT 455 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 456 RVRRFQQDDAHIF 468 >gi|146304348|ref|YP_001191664.1| threonyl-tRNA synthetase [Metallosphaera sedula DSM 5348] gi|172046910|sp|A4YH38|SYT_METS5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145702598|gb|ABP95740.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Metallosphaera sedula DSM 5348] Length = 541 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 89/405 (21%), Positives = 154/405 (38%), Gaps = 63/405 (15%) Query: 33 HQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G+ + P GQ + + +RE G E+ + LW SG YD+Y Sbjct: 149 HEESGPGLVLFHPKGQLIRNEMINYMREINASMGYQEVYTSHVFRTVLWKISGHYDTYRD 208 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVM 150 +ML + ++D + P + I++S ++SYR+LP F + +R E + +G++ Sbjct: 209 KML-IFQKDDDELGIKPMNCPAHILIYKSRVRSYRDLPIRFSEFGNVYRWEKKGELYGLL 267 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R+R F D + F L + K + L + + G K +R +LS Sbjct: 268 RTRGFTQDDGHIF-LREDQLKDEVKNLVRKTLDVLGKFGFKGEDVRI-------NLSTR- 318 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 P E+ D EQW A DV E Sbjct: 319 ----------------------PDESIGSD---------EQWEKATKALLDVLKELNVPY 347 Query: 271 LPENKRVSARGIEVG-----------HIFYFGTKYSLP--MSATFKGADGKDHYVQMGSY 317 + + K + G ++ + ++LP + DG M Sbjct: 348 VVKEKEGAFYGPKIDFDIRDSLNRWWQLSTIQVDFNLPERFKLEYVDEDGSKKRPVMVHR 407 Query: 318 GI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 I G++ + A++ GK W ++P ++ ++ I + D + D +++ L + G Sbjct: 408 AIYGSLDRMIAILLEHFRGKLPTW---LSPVQVRVLPI-SEDNL--DYAKRVMDVLVQRG 461 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D GE + + G P VIVG K S+ KV I+ R Sbjct: 462 IRTEIDPSGETLSKRIKRGYDDGVPYLVIVGRKEASEEKVTIRAR 506 >gi|317176942|dbj|BAJ54731.1| threonyl-tRNA synthetase [Helicobacter pylori F16] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|295101322|emb|CBK98867.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Faecalibacterium prausnitzii L2-6] Length = 594 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 2/136 (1%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +LP G + I+E++ G + + P + + +L+ SG +D Y + M Sbjct: 213 RGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLYKTSGHWDHYRENMFPA 272 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P + I+ + SYR+LP +I FR E G+ R R F Sbjct: 273 MEMEGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIAHDFRYESSGTLKGIERGRHF 332 Query: 156 LMKDAYSFDLTPEGSK 171 DA+ F TPE K Sbjct: 333 CQNDAHLF-CTPEQIK 347 >gi|313124186|ref|YP_004034445.1| threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280749|gb|ADQ61468.1| Threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 643 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 161/408 (39%), Gaps = 39/408 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 259 GLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D + M+ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + + + ++H + R LS+ D Sbjct: 379 TLNDGHTF-VALDQVQEEFARTLQIIMDVYHDFDINDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M S D + L+ + E A Y D+ + +L + Sbjct: 424 PKNTDKYFANDEMWERSQSMLKAAMDDMGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L ++ GADG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFEL----SYIGADGEEHRPVMIHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N+ AH D +K+ L G D E++G + Sbjct: 533 KGAFPTW---LAPVQAEIIPVNLDAH----SDYAKKVRDELVAKGFRAEIDFRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 + P +++G ++ V ++ T + SL E ++ S Sbjct: 586 IRESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMDKLS 633 >gi|217967219|ref|YP_002352725.1| prolyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] gi|217336318|gb|ACK42111.1| prolyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] Length = 480 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 14/177 (7%) Query: 255 PYAATSDVHNEKLFDSLP----ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 P A NEK +L E R ++ G G ++ F+ DG+ Sbjct: 195 PVIAGKKTENEKFAGALHTYSIEVLLADGRALQAGTSHNLGQHFAKAFDIMFQDVDGERK 254 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH--DQV-CRDACEK 367 YV S+G+ + R++ A+I + D G++ P VAP++I +I I + D+V + ++ Sbjct: 255 YVWQTSWGV-STRLIGALIMTHGDDYGLVLPPRVAPYQIVIIPIWKNETDKVKVYNYIDE 313 Query: 368 IYARLSK---VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IY L K V D D G +F +L G P+++ +G K V ++ + R Sbjct: 314 IYEVLKKYFRVKVD---RDEEHTPGWKFNEWELKGVPVRLEIGPKEVEKQEIYVARR 367 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 11/186 (5%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K F+ L D +++L+ ++ + KG P G +N+ I+ E+ Sbjct: 2 EKKFVEELTSQKEDFSKWYTEVVLKADLVDYSPVKGCMVIKPYGYAIWENMQRILDEKIK 61 Query: 63 RTGAIEMSVPT-LQSADLWVESGRYDSYGKEMLRLADRNDK----AMIYGPTHEEVMTDI 117 TG + P + + L E+ + + ++ + D+ + PT E ++ + Sbjct: 62 ETGHVNAYFPLFIPKSFLEKEAEHVEGFSPQVAWVTKGGDEDLFEPLAVRPTSEAIICSM 121 Query: 118 FRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 + I+S+R+LP Q +++ E RP +R+ EFL ++ ++ T E ++ Sbjct: 122 YSKWIQSWRDLPILINQWANVVRWEKETRP---FLRTTEFLWQEGHTAHRTFEEAEEEAL 178 Query: 176 KMFVSY 181 +M Y Sbjct: 179 RMLNVY 184 >gi|308062983|gb|ADO04870.1| threonyl-tRNA synthetase [Helicobacter pylori Sat464] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|308061413|gb|ADO03301.1| threonyl-tRNA synthetase [Helicobacter pylori Cuz20] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|188526926|ref|YP_001909613.1| threonyl-tRNA synthetase [Helicobacter pylori Shi470] gi|238691884|sp|B2URV1|SYT_HELPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|188143166|gb|ACD47583.1| threonyl-tRNA synthetase [Helicobacter pylori Shi470] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|84624684|ref|YP_452056.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|73919845|sp|Q5GXY0|SYT_XANOR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123725509|sp|Q2P0Z5|SYT_XANOM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|84368624|dbj|BAE69782.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 634 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 78/394 (19%), Positives = 141/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 256 LQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 316 AMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F L + + L ++ G I ++ P +G D + Sbjct: 375 RVRGFTQDDGHVFCLESQ-IESEVTAFHQQALAVYTAFGFDDIQIKIALRPEKRLGDDAT 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A V C ++ + P A Y + H L Sbjct: 434 WDKAEAALRSALGV-CGVEWQELPGEG-------------------AFYGPKIEYH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 471 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G +P +AP ++ + NI DA K L+ G V D E+ Sbjct: 524 ILIEHHAGA---FPSWLAPVQVVVANITDAQADYVDAVRKT---LANQGFRVSADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++VG + + V ++ R Sbjct: 578 IGYKIREHTLQRVPYLLVVGDREKENGAVAVRTR 611 >gi|13358015|ref|NP_078289.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762025|ref|YP_001752537.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920192|ref|ZP_02931576.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508558|ref|ZP_02958076.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701893|ref|ZP_02971547.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|81858603|sp|Q9PQ38|SYP_UREPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|259511629|sp|B1AJ93|SYP_UREP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|11279770|pir||B82890 prolyl aminoacyl-tRNA synthetase UU452 [imported] - Ureaplasma urealyticum gi|6899444|gb|AAF30864.1|AE002141_10 prolyl aminoacyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827602|gb|ACA32864.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902571|gb|EDT48860.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182676000|gb|EDT87905.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701201|gb|EDU19483.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 472 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 77/151 (50%), Gaps = 12/151 (7%) Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y G ++ F+G D + HYV S G+ + R++ A+I D +G+I P +A + Sbjct: 232 YLGQFFAKAYDIKFQGQDNQMHYVHQMSAGL-STRIIGALIMVHADDQGLILPPDIAFNQ 290 Query: 349 ISLINIKAHD-----QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ 403 I+++ I ++ ++ + CE++ +F D + IG + A ++ G P+ Sbjct: 291 IAILTIFSNKNPQLLKISQQICEQLN------NYRLFEDHSDKGIGYKLAQQEIEGTPIC 344 Query: 404 VIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 ++VG+K + + +V I R T + ++ L ++ Sbjct: 345 ILVGAKELVNQQVVIVRRDTHEKINVDLTDL 375 >gi|317181405|dbj|BAJ59189.1| threonyl-tRNA synthetase [Helicobacter pylori F57] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|315639668|ref|ZP_07894808.1| proline--tRNA ligase [Enterococcus italicus DSM 15952] gi|315484629|gb|EFU75085.1| proline--tRNA ligase [Enterococcus italicus DSM 15952] Length = 478 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/167 (20%), Positives = 78/167 (46%), Gaps = 3/167 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GTK++ T+ + K S+G+ + R++ ++I + D G+ Sbjct: 215 GKAVQAGTSHYMGTKFAEAFDITYLTKENKHVAAHTTSWGV-STRLLGSLIMTHGDENGL 273 Query: 339 IWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 ++P +VAP ++ L+ + + + +KI+ L G V DD G +F + Sbjct: 274 VFPPTVAPTQVVLLPVGPWKKNPAILEKLDKIFQELKAKGIRVRLDDSENSPGYKFHEWE 333 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 L G +++ G + + + V K R + ++ +E++ Y + + Sbjct: 334 LKGACIRIECGPRDLENGHVMAKVRDVDGKVTVAFDELLAYIDEQLA 380 >gi|78776267|ref|YP_392582.1| threonyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] gi|78496807|gb|ABB43347.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] Length = 602 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G WLP G + + +++ + + G + P + +DLW SG Y +YG+ M Sbjct: 228 GFPIWLPAGGRLRARLESLLFKAHRKRGYEPVRGPEMLRSDLWKTSGHYQNYGENMY-FT 286 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++ P + I+ + SYR+LP +++ + R E+ G+ R REF Sbjct: 287 NIDEIEFGVKPMNCVGHIKIYEEDLHSYRDLPLKYFEYGVVHRHEMTGALHGLFRVREFT 346 Query: 157 MKDAYSF 163 DA+ F Sbjct: 347 QDDAHIF 353 >gi|260777881|ref|ZP_05886774.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260605894|gb|EEX32179.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 642 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR + + G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 376 RVRGFTQDDAHIF 388 >gi|239814876|ref|YP_002943786.1| threonyl-tRNA synthetase [Variovorax paradoxus S110] gi|259516786|sp|C5CUU2|SYT_VARPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239801453|gb|ACS18520.1| threonyl-tRNA synthetase [Variovorax paradoxus S110] Length = 635 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 85/422 (20%), Positives = 146/422 (34%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G+ W P G V +R TG E+ P + LW ++G + +Y Sbjct: 255 IDEVAPGVVFWHPKGWALWQAVEQYMRGIYRDTGYWEVKGPQILDKSLWEKTGHWQNYRD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF+S ++SYR+LP + + R+E G+M Sbjct: 315 NMF-TTESEKREYALKPMNCPGHVLIFKSDLRSYRDLPLRYGEFGQCHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F T + +++ G I + + P +G D Sbjct: 374 RVRGFTQDDGHIF-CTEDQILEECVAYTAQLQKVYADFGFTEILYKVATRPDNRVGSD-- 430 Query: 208 HEFIVLADTGETQVF--CSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 L D E V + +DF I P + + I Sbjct: 431 ----ELWDKAEHAVMEALRRSGVDFIISPGDGAFYGPKIEYT------------------ 468 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 L D+L + ++ G +Y S G+ H V + +G++ Sbjct: 469 --LKDALGRQWQCGTMQVDFNTAERLGGEYVTETS-------GRAHPVMLHRAIVGSLER 519 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ H G W +AP +++++NI D + L G V D Sbjct: 520 FIGMLIEHHAGALPAW---LAPVQVAVLNISEGQA---DYAASVAKTLQNQGLRVQLDLH 573 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+I + L P ++VG K V ++ R MSLE + ++ Sbjct: 574 NEKITYKIRKHSLQKLPYILVVGDKEREAGAVAVRARGNQDLGAMSLESFVQRLVQDVAD 633 Query: 445 NR 446 R Sbjct: 634 KR 635 >gi|158336193|ref|YP_001517367.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017] gi|158306434|gb|ABW28051.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017] Length = 616 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 84/420 (20%), Positives = 154/420 (36%), Gaps = 79/420 (18%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ + G + P + + DLW SG +D Y M Sbjct: 239 GLVFWHPRGARIRQVIETYWRQAHTQGGYELLYTPHMANLDLWKTSGHFDFYRDSMFDQM 298 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +A P + ++ + SYR P + ++ +R E G+MR R F Sbjct: 299 EVETQAYQIKPMNCPFHVLTYQHDLHSYREFPLRWAELGTVYRYERSGTLHGLMRVRGFT 358 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F L + ++ E + + D Sbjct: 359 QDDAHIFCLPDQ-------------------------------------VADEILAVLDL 381 Query: 217 GETQVFCSKDFMDFPI-----PSENTDFDDIISLNSIVEQWTAPYAATSDVH---NEKLF 268 ET V F D+ + P ++ D+I L AT D+ + K + Sbjct: 382 TET-VLSDFGFRDYEVNLSTRPDKSVGSDEIWDL------------ATQDLRTALDRKGW 428 Query: 269 DSLPENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMG 315 + L + + G + +G ++ T ++LP + ADG M Sbjct: 429 EYLTDEGGGAFYGPKIDLKIRDAIGRLWQCSTIQVDFNLPERFKMEYVAADGTRQRPIMI 488 Query: 316 SYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 I G++ ++ ++ G +W +AP +I L+ + R ++ +L + Sbjct: 489 HRAIFGSLERFFGILIENYAGDFPLW---LAPVQIRLLVVS---DAQRPYALEVLEQLQQ 542 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G D GE++G Q + L P+ +VG K V + I+ R + +E + L E+ Sbjct: 543 KGFRAEIDQTGERLGKQIRQSALEKIPVVAVVGQKEVEAQTLNIRTRHSEEQELLKLPEL 602 >gi|229079560|ref|ZP_04212097.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228703729|gb|EEL56178.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2] Length = 640 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|146304669|ref|YP_001191985.1| prolyl-tRNA synthetase [Metallosphaera sedula DSM 5348] gi|172046942|sp|A4YI09|SYP_METS5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145702919|gb|ABP96061.1| prolyl-tRNA synthetase [Metallosphaera sedula DSM 5348] Length = 480 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 6/160 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLR 95 KG W+P G K NV +IR+ + TG E+ P L L + + + KE+ Sbjct: 34 KGSGVWMPYGFKIRQNVTTLIRKLLDETGHEEVLFPLLIPETLLKKEAEHIKGFEKEVFW 93 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D ++ PT E +T + IK Y LP FYQI FR E + ++R Sbjct: 94 VTHGGEDELEERFALRPTSEVAITLMESLWIKGYSQLPRKFYQIVSVFRYETKATRPMIR 153 Query: 152 SREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 RE K+A++ T E + ++ Y + F LG+ Sbjct: 154 VRELSTFKEAHTVHETFEDAARQVDEAVEIYSKFFDILGI 193 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 6/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + G ++ M + ADG + SYGI RV+A VI + D G Sbjct: 222 GRALQIGTAHHLGQHFTKAMDYKVQRADGSHVHPHQTSYGISD-RVIATVISINGDDHGP 280 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEK----IYARLSKVGCDVFWDDMGEQI-GSQFA 393 I P VAP + +I I + + K + + L G V D ++ G ++ Sbjct: 281 ILPPVVAPIEGVIIPIPGKSEEDTEKINKYAMEVESVLKNSGIRVALDASEDKTPGEKYY 340 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + +L G P+++ +G + ++ +K R T + + EE++ Sbjct: 341 IWELKGVPIRIEIGPRELNSGTAFLKRRDTLEGKSVKREELVK 383 >gi|88809590|ref|ZP_01125097.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7805] gi|88786340|gb|EAR17500.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7805] Length = 611 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 83/393 (21%), Positives = 150/393 (38%), Gaps = 45/393 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ G + P + LW SG D Y + M Sbjct: 229 GLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYTPHVADISLWKTSGHLDFYAESMFGPM 288 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 289 QVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 347 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIV 212 DA+ F L PE K+ RI + + + P IG D + Sbjct: 348 TQDDAHVFCL-PEQISDEILKILDLTERILSTFDFNTYEINLSTRPEKSIGDDAVWD--- 403 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 LA G + K + I E A Y D+ K+ D++ Sbjct: 404 LATKGLIEALERKGWA-----------------YKIDEGGGAFYGPKIDL---KIEDAIG 443 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIES 331 + S ++ F ++ L + ADG M I G++ ++ Sbjct: 444 RMWQCSTIQLD----FNLPERFKL----DYIAADGSKQRPIMIHRAIFGSLERFFGIMTE 495 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++ G W +AP ++ L+ + D+V + E++ +L++VG D G+++G Sbjct: 496 NYAGDYPFW---LAPEQVRLLPVT--DEV-QPYAERLLDQLTQVGVRATIDRSGDRLGKL 549 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + P+ ++G+K + V ++ R G Sbjct: 550 IRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDG 582 >gi|308183917|ref|YP_003928050.1| threonyl-tRNA synthetase [Helicobacter pylori SJM180] gi|308059837|gb|ADO01733.1| threonyl-tRNA synthetase [Helicobacter pylori SJM180] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|325473136|gb|EGC76332.1| threonyl-tRNA synthetase [Treponema denticola F0402] Length = 585 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 10/190 (5%) Query: 5 KYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H+ + + I + + G W P G + +R+ Sbjct: 172 KEYLAMLEE----AEKRDHRKVGKAMNLFHIDEENPGQVFWHPKGWTLYLTIQNYVRKRI 227 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G +E+ P + LW SG + Y KE + + + + P + +IF+ Sbjct: 228 KEDGYLEVHTPFVMPRSLWERSGHWAKY-KENMFITESEKRLFALKPMNCPGHVEIFKQG 286 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY++LP + R+E G+MR R F+ DA+ F T E +K Sbjct: 287 IKSYKDLPLRLAEFGSCTRNEPSGSLHGIMRIRGFVQDDAHIF-CTEEQISSEVSKFCAL 345 Query: 181 YLRIFHRLGL 190 R++ G Sbjct: 346 LKRMYADFGF 355 >gi|228921082|ref|ZP_04084417.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838628|gb|EEM83934.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 640 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|323499329|ref|ZP_08104306.1| threonyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] gi|323315717|gb|EGA68751.1| threonyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] Length = 642 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR + + G E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 376 RVRGFTQDDAHIF 388 >gi|229190445|ref|ZP_04317445.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228593058|gb|EEK50877.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876] Length = 640 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|218231087|ref|YP_002367070.1| threonyl-tRNA synthetase [Bacillus cereus B4264] gi|218159044|gb|ACK59036.1| threonine--tRNA ligase [Bacillus cereus B4264] Length = 640 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|317179928|dbj|BAJ57714.1| threonyl-tRNA synthetase [Helicobacter pylori F32] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|208434081|ref|YP_002265747.1| threonyl-tRNA synthetase [Helicobacter pylori G27] gi|238065115|sp|B5Z9Q1|SYT_HELPG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|208432010|gb|ACI26881.1| threonyl-tRNA synthetase [Helicobacter pylori G27] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|86147528|ref|ZP_01065839.1| threonyl-tRNA synthetase [Vibrio sp. MED222] gi|85834696|gb|EAQ52843.1| threonyl-tRNA synthetase [Vibrio sp. MED222] Length = 642 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 85/422 (20%), Positives = 156/422 (36%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G + IR++ E+ P + LW SG +D Y + Sbjct: 257 MQQEAPGMVFWHHNGWTIFRELEVFIRQKLTEYDYQEVKGPLMMDRVLWERSGHWDKYAE 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 376 RVRGFTQDDAHVF-CTEDQVQQEVKACIEMVYDTYTTFGFENIVVKLSTRPEQRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + M+ I E A Y + L Sbjct: 433 ----EMWDRAEADLKQALEAMEIAY--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + ++LP + AT+ G D + H M I G++ Sbjct: 472 HDCLD-------RAWQCGTV---QLDFALPERLGATYVGEDNERHTPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++ I + ++I +L K G V D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAIVMGITDKQS---EYVQEIAKKLQKSGFRVKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++ G + + ++ ++ R +++ I+Y S+ Sbjct: 576 NEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQAEVSS 635 Query: 445 NR 446 + Sbjct: 636 RK 637 >gi|317011967|gb|ADU82575.1| threonyl-tRNA synthetase [Helicobacter pylori Lithuania75] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|194289383|ref|YP_002005290.1| threonyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] gi|238692758|sp|B3R4J1|SYT_CUPTR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|193223218|emb|CAQ69223.1| threonine tRNA synthetase [Cupriavidus taiwanensis LMG 19424] Length = 635 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 14/201 (6%) Query: 7 FLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + +T + H + + G+ W P G + V +R Sbjct: 231 YLHMLEE----AEKRDHRKLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW +SG + +Y KE + + + + P + IF ++ Sbjct: 287 AGYDEVRTPQVMDRSLWEKSGHWQNY-KENMFVTESEKRDYAIKPMNCPGHVQIFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVS 180 SYR+LP + R+E G+MR R F+ DA+ F + ++N++ S Sbjct: 346 SYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEAKAFNELAFS 405 Query: 181 YLRIFHRLGLKSIPMRAESGP 201 ++ G K + ++ P Sbjct: 406 ---VYDDFGFKDVKVKLSLRP 423 >gi|206971420|ref|ZP_03232370.1| threonyl-tRNA synthetase [Bacillus cereus AH1134] gi|228952703|ref|ZP_04114777.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229069894|ref|ZP_04203176.1| Threonyl-tRNA synthetase [Bacillus cereus F65185] gi|206733405|gb|EDZ50577.1| threonyl-tRNA synthetase [Bacillus cereus AH1134] gi|228713297|gb|EEL65190.1| Threonyl-tRNA synthetase [Bacillus cereus F65185] gi|228806979|gb|EEM53524.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 640 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|325997000|gb|ADZ49208.1| Threonyl-tRNA synthetase [Helicobacter pylori 2017] Length = 573 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 199 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 257 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 258 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 317 Query: 157 MKDAYSF 163 DA+ F Sbjct: 318 QDDAHIF 324 >gi|229178727|ref|ZP_04306091.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W] gi|228604885|gb|EEK62342.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W] Length = 640 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|21674935|ref|NP_663000.1| threonyl-tRNA synthetase [Chlorobium tepidum TLS] gi|34222753|sp|Q8KAN0|SYT_CHLTE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21648164|gb|AAM73342.1| threonyl-tRNA synthetase [Chlorobium tepidum TLS] Length = 657 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 80/417 (19%), Positives = 150/417 (35%), Gaps = 62/417 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + + ++ EQ + G + + P + + +L+ SG Y Y L Sbjct: 273 GLPIWLPNGAIIRNELETFLKAEQRKRGYVPVYTPHIGNIELYKRSGHYPYYSDSQFPPL 332 Query: 95 RLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D + Y P + I+ ++SYR+LP + +R E G++R Sbjct: 333 TYKDETGREEQYLLKPMNCPHHHLIYSQTLRSYRDLPIRLTEFGTVYRHEQSGELNGLVR 392 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR------------AES 199 +R F D++ + + N + ++ +F+ LG + R + Sbjct: 393 ARGFTQDDSHIYCRPDQLVDEICNAIDLTRF-VFNTLGFDEVETRLSLHDPENQSKYGGT 451 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 + G + AD + F F P D I ++I +W Sbjct: 452 AEVWGQAEKDVKEAADRMGIKYFIGIGEASFYGPK-----IDFIVRDAIGRKWQLGTVQV 506 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYG 318 V E+ FD ++ G+DG+ H V + Sbjct: 507 DYVMPER-FD------------------------------LSYIGSDGQKHRPVVIHRAP 535 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G+M V+ G +W +AP + ++ I + D ++YA+L + G Sbjct: 536 FGSMERFIGVLIEHTAGNFPLW---LAPVQAVVLPIA---EEVHDYAREVYAKLHEAGIR 589 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + A+L P +++G +V ++ G ++E+I Sbjct: 590 TELDLRSEKIGKKIREAELSKIPAMLVIGRNEQEKGEVSLRRHRKGDEGSFGVDELI 646 >gi|308182296|ref|YP_003926423.1| threonyl-tRNA synthetase [Helicobacter pylori PeCan4] gi|308064481|gb|ADO06373.1| threonyl-tRNA synthetase [Helicobacter pylori PeCan4] Length = 612 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|14521542|ref|NP_127018.1| threonyl-tRNA synthetase [Pyrococcus abyssi GE5] gi|14548274|sp|Q9UZ14|SYT_PYRAB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|5458761|emb|CAB50248.1| thrS threonyl-tRNA synthetase [Pyrococcus abyssi GE5] Length = 625 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 71/332 (21%), Positives = 135/332 (40%), Gaps = 50/332 (15%) Query: 117 IFRSHIKSYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSY 174 I + I SYRNLP Y++ + FR E R G+ R R F M D ++ E +K + Sbjct: 304 IKKDAIISYRNLPLRMYELTRYSFRREKRGELSGLRRLRAFTMPDMHTLAKDIEQAKEEF 363 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 K F + + +GL + E + ++DF Sbjct: 364 KKQFKLSMEVLEGVGLTP----------------------EDYEVAIRFTEDFW-----K 396 Query: 235 ENTDF----DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 E+ DF +I ++E W + D+L + +S I+V + F Sbjct: 397 EHKDFIVELVKLIGKPVLIEMWKQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERF 456 Query: 291 GTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESS----HDGKGIIWPDSV 344 G T+ +G++ Y + + GA+ RV+ A++E ++GK ++P + Sbjct: 457 GI--------TYYDENGEEKYPLILHCSPSGAIERVMYAILEKQAKLMNEGKKPMFPLWL 508 Query: 345 APFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 +P ++ +I + + D + +L V DD E++ + A+ P V Sbjct: 509 SPIQVRVIPV---SEEYLDYALYVAGKLEGAKIRVDVDDEDERLNKKIRRAEKEWIPYIV 565 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +VG++ + + ++ R G + + +EE+I Sbjct: 566 VVGAREKENGTITVRRREDGKQYETRIEELIK 597 >gi|295094342|emb|CBK83433.1| prolyl-tRNA synthetase, family I [Coprococcus sp. ART55/1] Length = 477 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 3/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ F D K YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFGIQFTDKDNKLKYVHQTSWGM-TTRLIGAIIMVHGDNSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P VAP ++ +I I + ++ +L V DD + G +F+ ++ Sbjct: 284 VLPPKVAPTQVMIIPIMQKKAGVLEKAAELREKLGAFRVKV--DDSDKSPGWKFSEQEMR 341 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P++V +G K + ++ + R T + +SL+E+ Sbjct: 342 GIPIRVEIGPKDIEANQAVLVRRDTREKITVSLDEI 377 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 11/144 (7%) Query: 25 LMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VE 82 ++L+ G+I + + KG + P G + + + E TG + +P L L E Sbjct: 25 VVLKAGLIAYTNVKGCMAIKPAGYAIWELIQKQLDERFKATGVENVYMPMLIPESLLEKE 84 Query: 83 SGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ-- 136 + + E+ + + + M PT E + D +++ I+SYR+LP + Q Sbjct: 85 KDHVEGFAPEVAWVTYGGLNPLTERMCVRPTSETLFCDFYKNDIQSYRDLPRVYNQWCSV 144 Query: 137 LKFRDELRPRFGVMRSREFLMKDA 160 +++ E RP +RSREFL ++ Sbjct: 145 MRWEKETRP---FLRSREFLWQEG 165 >gi|313905495|ref|ZP_07838859.1| prolyl-tRNA synthetase [Eubacterium cellulosolvens 6] gi|313469679|gb|EFR65017.1| prolyl-tRNA synthetase [Eubacterium cellulosolvens 6] Length = 479 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 1/156 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G F ++ + D +V S+G+ RV+ A+I D G+ Sbjct: 225 GKALQSGTSHNFDDIFAQAYDVQYTDKDNTLKHVHQTSWGM-TTRVIGAMIMVHGDNSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ +I I+ + D +I +L+ G V DD ++ G +F+ ++ Sbjct: 284 VLPPHIAPTQVMIIPIRQDAEGVLDKAVEIKEKLATAGIRVDLDDTDKRPGWKFSEQEMR 343 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P++V +G K V + + R T + +S++E+ Sbjct: 344 GIPVRVELGPKDVENGSAVLVRRDTREKLVVSIDEI 379 Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 10/131 (7%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG + P G +N+ + E TG + +P L +L E+ + + E+ Sbjct: 38 KGCMAIKPAGYAIWENIQHNLDERFKATGVKNVYMPMLIPENLLNKEAELVNGFAPEVAW 97 Query: 96 L----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + A++ + + PT E + D + I+SY++LP + Q L++ RP Sbjct: 98 VTHGGAEKLQERLCIRPTSETLFCDFYAKDIQSYKDLPKVYNQWCSVLRWEKTTRP---F 154 Query: 150 MRSREFLMKDA 160 +RSREFL ++ Sbjct: 155 LRSREFLWQEG 165 >gi|300812909|ref|ZP_07093302.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496107|gb|EFK31236.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 643 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 161/408 (39%), Gaps = 39/408 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 259 GLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D + M+ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + + + ++H + R LS+ D Sbjct: 379 TLNDGHTF-VALDQVQEEFARTLQIIMDVYHDFDINDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M S D + L+ + E A Y D+ + +L + Sbjct: 424 PKNTDKYFANDEMWERSQSMLKAAMDDMGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L ++ GADG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFEL----SYIGADGEEHRPVMIHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N+ AH D +K+ L G D E++G + Sbjct: 533 KGAFPTW---LAPVQAEIIPVNLDAH----SDYAKKVRDELVAKGFRAEIDFRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 + P +++G ++ V ++ T + SL E ++ S Sbjct: 586 IRESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMDKLS 633 >gi|154344603|ref|XP_001568243.1| threonyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065580|emb|CAM43350.1| putative threonyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 789 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 4/130 (3%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML- 94 S G WLP G + + + +R++ R G E+ P + S+ LW+ SG ++ Y M Sbjct: 305 SPGSAFWLPHGARIYNTLVEFLRKKYRRCGFQEVISPNMYSSKLWMVSGHWEKYADNMFC 364 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 ++ D + P + +F S SYR LP + + R+EL G+ R R Sbjct: 365 TKCEKEDFGL--KPMNCPGHCIMFASQPHSYRELPIRYADFGVLHRNELSGALTGLTRVR 422 Query: 154 EFLMKDAYSF 163 F DA+ F Sbjct: 423 RFQQDDAHIF 432 >gi|197118372|ref|YP_002138799.1| threonyl-tRNA synthetase [Geobacter bemidjiensis Bem] gi|238690868|sp|B5EBX9|SYT_GEOBB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|197087732|gb|ACH39003.1| threonyl-tRNA synthetase [Geobacter bemidjiensis Bem] Length = 636 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 88/404 (21%), Positives = 158/404 (39%), Gaps = 43/404 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+E + G + P + +LW SG Y++Y +E + Sbjct: 263 GLVIWHPKGAMLRTILEDFERKEHLKRGYDIVLGPQILKTELWQRSGHYENY-RENMYFT 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++++ P + I+RS ++SYR+LP ++++ R E G++R R F Sbjct: 322 TVDEQSYGVKPMNCLAHMMIYRSQLRSYRDLPLRYFELGTVHRHERAGVLHGLLRVRGFT 381 Query: 157 MKDAYSFDLTPEGSKHSYNKM--FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 DA+ TPE + FV+ + G EF + Sbjct: 382 QDDAHIL-CTPEQLDAEIKGVIQFVT--------------------EVMGIFGFEFEMEL 420 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T + S D + + D I E A Y D+ KL D+L + Sbjct: 421 STRPEKSIGSDDAWELATNALLNALKDSGRPYEINEGDGAFYGPKIDI---KLRDAL--D 475 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSH 333 +R I+ F ++ L T+ ADG K V + +GA+ V+ Sbjct: 476 RRWQCATIQCD--FTLPERFDL----TYVDADGEKKRPVMVHRVILGAIERFIGVLIEHF 529 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G +P +AP + +++ + +Q+ + + +L G V D E++G + Sbjct: 530 AGN---FPTWLAPVQATIVTV-TDNQI--PYAQAAFDKLRAAGIRVQKDFRNEKLGFKIR 583 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 A L P ++VG K V + + R E M+ E+ +++ Sbjct: 584 EAQLQKIPYMLVVGDKEVESGMLAPRFRDGKNLESMTPEQFVSF 627 >gi|319794591|ref|YP_004156231.1| threonyL-tRNA synthetase [Variovorax paradoxus EPS] gi|315597054|gb|ADU38120.1| threonyl-tRNA synthetase [Variovorax paradoxus EPS] Length = 635 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 85/422 (20%), Positives = 148/422 (35%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + + G+ W P G V +R TG E+ P + LW ++G + +Y Sbjct: 255 IDEVAPGVVFWHPKGWAVWQAVEQYMRGIYRDTGYWEVKGPQILDKSLWEKTGHWQNYRD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF+S ++SYR+LP + + R+E G+M Sbjct: 315 NMF-TTESEKREYALKPMNCPGHVLIFKSDLRSYRDLPLRYGEFGQCHRNEPSGALHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F T + +++ G I + + P +G D Sbjct: 374 RVRGFTQDDGHIF-CTEDQILDECIAYTEQLQKVYADFGFTDILYKVATRPENRVGSD-- 430 Query: 208 HEFIVLADTGETQVFCS--KDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 L D E V S + +DF I P + + I Sbjct: 431 ----ELWDKAEHAVMESLRRSGVDFIISPGDGAFYGPKIEYT------------------ 468 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 L D++ + ++ G +Y S G+ H V + +G++ Sbjct: 469 --LRDAIGRQWQCGTMQVDFNTAERLGGEYVTESS-------GRAHPVMLHRAIVGSLER 519 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ H G W +AP +++++NI D ++ L G V D Sbjct: 520 FIGMLIEHHSGALPAW---LAPVQVAVLNISEGQA---DYAAQVAKTLQNQGLRVQLDLH 573 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+I + L P ++VG K V ++ R MSLE + ++ Sbjct: 574 NEKITYKIRKHSLQKLPYILVVGDKEKEAGAVAVRARGNQDLGAMSLESFVQRLVQDVAD 633 Query: 445 NR 446 R Sbjct: 634 KR 635 >gi|218709221|ref|YP_002416842.1| threonyl-tRNA synthetase [Vibrio splendidus LGP32] gi|218322240|emb|CAV18357.1| Threonyl-tRNA synthetase [Vibrio splendidus LGP32] Length = 655 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 85/422 (20%), Positives = 156/422 (36%), Gaps = 48/422 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G + IR++ E+ P + LW SG +D Y + Sbjct: 270 MQQEAPGMVFWHHNGWTIFRELEVFIRQKLTEYDYQEVKGPLMMDRVLWERSGHWDKYAE 329 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 330 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 388 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 389 RVRGFTQDDAHVF-CTEDQVQQEVKACIEMVYDTYTTFGFENIVVKLSTRPEQRVGSD-- 445 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + M+ I E A Y + L Sbjct: 446 ----EMWDRAEADLKQALEAMEIAY--------------EIQEGEGAFYGPKIEF---TL 484 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + ++LP + AT+ G D + H M I G++ Sbjct: 485 HDCLD-------RAWQCGTV---QLDFALPERLGATYVGEDNERHTPVMIHRAILGSLER 534 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++ I + ++I +L K G V D Sbjct: 535 FIGILIEEYAG---FFPTWLAPEQAIVMGITDKQS---EYVQEIAKKLQKSGFRVKADLR 588 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E+IG + L P ++ G + + ++ ++ R +++ I+Y S+ Sbjct: 589 NEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQAEVSS 648 Query: 445 NR 446 + Sbjct: 649 RK 650 >gi|160943529|ref|ZP_02090762.1| hypothetical protein FAEPRAM212_01020 [Faecalibacterium prausnitzii M21/2] gi|158445208|gb|EDP22211.1| hypothetical protein FAEPRAM212_01020 [Faecalibacterium prausnitzii M21/2] gi|295103777|emb|CBL01321.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Faecalibacterium prausnitzii SL3/3] Length = 594 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 2/136 (1%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +LP G + I+E++ G + + P + + +L+ SG +D Y + M Sbjct: 213 RGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLYKTSGHWDHYRENMFPA 272 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P + I+ + SYR+LP +I FR E G+ R R F Sbjct: 273 MEMEGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIAHDFRYESSGTLKGIERGRHF 332 Query: 156 LMKDAYSFDLTPEGSK 171 DA+ F TPE K Sbjct: 333 CQNDAHLF-CTPEQIK 347 >gi|313904501|ref|ZP_07837877.1| threonyl-tRNA synthetase [Eubacterium cellulosolvens 6] gi|313470643|gb|EFR65969.1| threonyl-tRNA synthetase [Eubacterium cellulosolvens 6] Length = 591 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 4/135 (2%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ WLP G K +++ + R G E+S P L ++ LW SG + Y Sbjct: 196 MFDETAPGMPYWLPRGWKLFNSLLSFWRGIHEEHGYQEISGPILSNSKLWQTSGHWGHYK 255 Query: 91 KEMLRL-ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 M + ++ D++ Y P + +++S ++SYR+LPF Q+ R E Sbjct: 256 DNMFIIPGEKEDESDYYAAKPMNCPNAILVYKSRLRSYRDLPFRVAQVDNIHRKEKSGEL 315 Query: 148 -GVMRSREFLMKDAY 161 G+ R + F DA+ Sbjct: 316 NGLFRVQMFRQDDAH 330 >gi|300790769|ref|YP_003771060.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|299800283|gb|ADJ50658.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32] Length = 390 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G ++ +R + R G + P L +L+ SG + Y EM Sbjct: 23 GLPYWLPDGAIVRHSLEEYVRNLERRAGYQHVHSPVLGKRELYEISGHWSHYRDEMYPPM 82 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM-RSREFL 156 D + ++ P+ I+RS +SYR LP +I +R EL G + R R Sbjct: 83 DVGGEQLVLRPSLCPHHALIYRSRGRSYRELPLRMAEIGGMYRSELSGVLGGLSRVRAIQ 142 Query: 157 MKDAYSF 163 + DA+ F Sbjct: 143 LNDAHVF 149 >gi|91793061|ref|YP_562712.1| threonyl-tRNA synthetase [Shewanella denitrificans OS217] gi|123060978|sp|Q12NI7|SYT_SHEDO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91715063|gb|ABE54989.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella denitrificans OS217] Length = 642 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 81/397 (20%), Positives = 145/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR++ + E+ P + LW SG +D Y Sbjct: 256 MQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRALWERSGHWDKYSD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTNSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + K + + + Y + G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIFCTDDQVQKEVSDCIQMVY-DTYATFGFENIVVKLSTRPEKRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ Q + + +P E + I L Sbjct: 432 -DMWDRAEEALKQALIANEIEFEILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPSRLGATYVAEDNTRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + GK W +AP ++ ++NI D + + + G +D Sbjct: 521 FLGILIEEYAGKFPTW---LAPMQVVVMNITDKQA---DYVQDVVKIFKEQGIRASFDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTR 611 >gi|331270273|ref|YP_004396765.1| proline-tRNA ligase [Clostridium botulinum BKT015925] gi|329126823|gb|AEB76768.1| proline-tRNA ligase [Clostridium botulinum BKT015925] Length = 478 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 34/156 (21%), Positives = 78/156 (50%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG +S + + + + YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDNFSKAFNIQYNDKNSQLQYVHQTSWGV-TTRLIGAIIMVHGDDSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 P +AP ++ ++ I H + + E++ + ++K+ V D + G +F ++ Sbjct: 284 KLPPRIAPLQVVIVPIAQHKEGVLEKAEELRSNIAKIA-RVKVDSSDKMPGWKFNEYEMK 342 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+++ VG K + +++V + R T + +S++E+ Sbjct: 343 GVPVRLEVGPKDIENNQVVLVRRDTREKIFVSMDEL 378 >gi|91201672|emb|CAJ74732.1| strongly similar to threonyl-tRNA synthetase [Candidatus Kuenenia stuttgartiensis] Length = 640 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 2/132 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+E R G + P + +LW SG +D Y + M Sbjct: 261 GLAFWHPKGARMRSIIEDFWRQEHFRRGYEILYSPHIAKINLWKTSGHWDFYRESMYSPI 320 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + I P + I+++ + SYR+LP + ++ +R E G++R R F Sbjct: 321 DVDGHEYILKPMNCPFAVLIYKTKLHSYRDLPLRWGELGTVYRYERSGVLHGLLRVRGFT 380 Query: 157 MKDAYSFDLTPE 168 DA+ F TP+ Sbjct: 381 QDDAHIF-CTPD 391 >gi|313112983|ref|ZP_07798626.1| threonyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] gi|310624703|gb|EFQ08015.1| threonyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] Length = 594 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 2/136 (1%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +LP G + I+E++ G + + P + + +L+ SG +D Y + M Sbjct: 213 RGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLYKTSGHWDHYRENMFPA 272 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P + I+ + SYR+LP +I FR E G+ R R F Sbjct: 273 MEMEGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIAHDFRYESSGTLKGIERGRHF 332 Query: 156 LMKDAYSFDLTPEGSK 171 DA+ F TPE K Sbjct: 333 CQNDAHLF-CTPEQIK 347 >gi|293977850|ref|YP_003543280.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN] gi|292667781|gb|ADE35416.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN] Length = 489 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 9/151 (5%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++ + G +S + G YV S+GI + R++ A+I + D G+ Sbjct: 231 GKSLQIATSHFLGQNFSKAFDVRYTTEKGNKEYVWATSWGI-STRLIGAIIMTHSDDNGL 289 Query: 339 IWPDSVAPFKISLINI-KAHDQVCRDACEKIY----ARLSKVGCDVFWDDMGEQI-GSQF 392 I P +AP +I +I + K +Q+ + EK+ L K G + +D G +F Sbjct: 290 ILPPKIAPLQIVIIPVYKTQEQL--NLIEKLVLPLKESLEKRGISIKYDKRTYYTPGWKF 347 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ G P+++ +G K + VE+ R T Sbjct: 348 NEYEIKGIPIRITIGKKDIDRGTVEVVRRDT 378 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 4/70 (5%) Query: 96 LADRNDK---AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 + D+N K +I PT E ++ + ++ I SYR+LP F Q R E R RF +R+ Sbjct: 105 IVDKNSKLEDELIVRPTSETIIWNSYKRWINSYRDLPIRFNQWANIIRWERRTRF-FLRT 163 Query: 153 REFLMKDAYS 162 EFL ++ ++ Sbjct: 164 SEFLWQEGHT 173 >gi|78212568|ref|YP_381347.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Synechococcus sp. CC9605] gi|123756917|sp|Q3AKU0|SYT_SYNSC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78197027|gb|ABB34792.1| threonyl-tRNA synthetase [Synechococcus sp. CC9605] Length = 611 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 83/393 (21%), Positives = 150/393 (38%), Gaps = 45/393 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ G + P + LW SG D Y + M Sbjct: 229 GLVFWHPRGARIRLLIEEFWRQAHFEGGYELLYTPHVADISLWKTSGHLDFYAESMFGPM 288 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 + +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 289 EVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 347 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIV 212 DA+ F L PE K+ RI + + + P IG D + Sbjct: 348 TQDDAHVFCL-PEQISDEILKILDLTERILSAFDFSNYEINLSTRPEKSIGEDAVWD--- 403 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 LA G + K + I E A Y D+ K+ D++ Sbjct: 404 LATKGLIEALERKGWA-----------------YKIDEGGGAFYGPKIDL---KIEDAIG 443 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIES 331 + S ++ F ++ L + ADG M I G++ ++ Sbjct: 444 RMWQCSTIQLD----FNLPERFEL----DYIAADGSKQRPIMIHRAIFGSLERFFGIMTE 495 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++ G W +AP ++ L+ + D+V + E++ +L+K G D G+++G Sbjct: 496 NYAGDYPFW---LAPEQVRLLPVT--DEV-QPYAEQLLDQLTKAGVRATVDRSGDRLGKL 549 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + P+ ++G+K + V ++ R G Sbjct: 550 IRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDG 582 >gi|301053905|ref|YP_003792116.1| threonyl-tRNA synthetase [Bacillus anthracis CI] gi|300376074|gb|ADK04978.1| threonyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 639 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + +RE Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQIIRNELEVFLREIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TPE Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPE 394 >gi|262038762|ref|ZP_06012119.1| threonine--tRNA ligase [Leptotrichia goodfellowii F0264] gi|261747220|gb|EEY34702.1| threonine--tRNA ligase [Leptotrichia goodfellowii F0264] Length = 636 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + +H G ++P G + ++ + I R+E + E+ P + +LW SG + +Y + Sbjct: 254 LDEHGPGFPFFMPKGMELMNKLQEIWRKEHKKRKYEEIRTPVMLDKELWEISGHWFNY-R 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + ++ ++K P + +++++ SY++LP + ++ L R E G+M Sbjct: 313 ENMYTSEIDEKVYAIKPMNCPGSIIAYKNNLHSYKDLPLKYGEMGLVHRHEFSGALHGLM 372 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 373 RVRAFTQDDAHVF 385 >gi|224062355|ref|XP_002195014.1| PREDICTED: similar to probable threonyl-tRNA synthetase 2, cytoplasmic [Taeniopygia guttata] Length = 719 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 87/417 (20%), Positives = 166/417 (39%), Gaps = 57/417 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G +LP G + + IR E R E+ P + ++ LW SG + Y Sbjct: 330 FFHDLSPGSCFFLPRGAFLYNTLVDFIRGEYRRRNFTEVVSPNVFNSKLWEASGHWQHYS 389 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + I P + +F +S+R LP + R+EL G+ Sbjct: 390 ENMFSFEVEKETFAI-KPMNCPGHCLMFAHRPRSWRELPLRLADFGVLHRNELSGTLSGL 448 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--GDLS 207 R R F DA+ F T E + K + +L+ + + + + + P GDL Sbjct: 449 TRVRRFQQDDAHIF-CTMEQIEEEI-KDCLDFLKSVYAVFGFTFQLHLSTRPENYLGDLE 506 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 + D E Q+ +N SLN+ EQW A Y D Sbjct: 507 -----IWDHAEKQL-------------QN-------SLNNFGEQWNLNPGDGAFYGPKID 541 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + K+ D++ + + ++ F +++L T+ G DG D V + + Sbjct: 542 I---KIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVGKDGDDKKRPVIIHRAIL 590 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCD 378 G++ + A++ ++ GK WP ++P ++ ++ + A +Q + C++ + D Sbjct: 591 GSVERMIAILAENYGGK---WPFWLSPRQVMVVPVGPASEQYAQQVCDQFFEAGFMSDVD 647 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + D + + A L + ++VG K +++ V ++ R + ++S+ I Sbjct: 648 L---DQSCTLNKKIRNAQLAQYNFILVVGEKEKANNAVNVRTRDNKVHGEISVSSTI 701 >gi|163814965|ref|ZP_02206352.1| hypothetical protein COPEUT_01115 [Coprococcus eutactus ATCC 27759] gi|158449648|gb|EDP26643.1| hypothetical protein COPEUT_01115 [Coprococcus eutactus ATCC 27759] Length = 477 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 3/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ F D K YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFGIQFTDKDNKLKYVHQTSWGM-TTRLIGAIIMVHGDNSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P VAP ++ +I I + ++ +L V DD + G +F+ ++ Sbjct: 284 VLPPKVAPTQVMIIPIMQKKAGVLEKAAELREKLGAFRVKV--DDSDKSPGWKFSEQEMR 341 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P++V +G K + ++ + R T + +SL+E+ Sbjct: 342 GIPIRVEIGPKDIEANQAVLVRRDTREKITVSLDEI 377 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 11/144 (7%) Query: 25 LMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VE 82 ++L+ G+I + + KG + P G + + + E TG + +P L L E Sbjct: 25 VVLKAGLIAYTNVKGCMAIKPAGYAIWELIQKQLDERFKATGVENVYMPMLIPESLLEKE 84 Query: 83 SGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ-- 136 + + E+ + + + M PT E + D +++ I+SYR+LP + Q Sbjct: 85 KDHVEGFAPEVAWVTYGGLNPLTERMCVRPTSETLFCDFYKNDIQSYRDLPKVYNQWCSV 144 Query: 137 LKFRDELRPRFGVMRSREFLMKDA 160 +++ E RP +RSREFL ++ Sbjct: 145 MRWEKETRP---FLRSREFLWQEG 165 >gi|192360042|ref|YP_001982990.1| threonyl-tRNA synthetase [Cellvibrio japonicus Ueda107] gi|238692463|sp|B3PL16|SYT_CELJU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|190686207|gb|ACE83885.1| threonyl-tRNA synthetase [Cellvibrio japonicus Ueda107] Length = 642 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 85/429 (19%), Positives = 165/429 (38%), Gaps = 53/429 (12%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIRE 59 ++ K +L +L+E A+ KL + + H + G+ W P G + +R Sbjct: 227 KQLKAYLNLLEEA---AKRDHRKLAKKFDLFHLQDEAPGMVFWHPKGWTLWQQIEQYMRA 283 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIF 118 +QN G E+ P + LW +SG +++Y + M +++ D A+ P + IF Sbjct: 284 KQNDWGYQEVRTPLIMDRVLWEKSGHWENYRENMFTTESEKRDFAV--KPMNCPGHVQIF 341 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE--GSKHSYN 175 ++S+++LP + R+E G+MR R F+ DA+ F + ++N Sbjct: 342 NHGLRSHKDLPLRLAEFGSCHRNEASGALHGIMRVRGFVQDDAHIFCTEDQVVAEVAAFN 401 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 +M S ++ G I ++ P S E A+ G + +P E Sbjct: 402 QMLKS---VYDDFGFTDIAVKLSLRPEKYAGSLETWNKAEEGLRTALRAAGLEWEELPGE 458 Query: 236 NTDFDDIISL---NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + I +++ W V E+L + V R + + Sbjct: 459 GAFYGPKIEYQIKDALGRSWQCGTIQLDYVLPERLDAEYVADDNVRKRPVML-------- 510 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 H +GS+ R + +IE ++G +W ++P ++ + Sbjct: 511 -----------------HRAILGSF----ERFLGILIE-HYEGSFPVW---LSPVQVVVA 545 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 NI + +++ L + G V D E+IG + + P ++VG K V Sbjct: 546 NITDSQA---EYVKRVEKALREQGIRVIADLRNEKIGFKIREHTIQRVPYLLVVGDKEVE 602 Query: 413 DSKVEIKHR 421 + + ++ R Sbjct: 603 NQSLAVRTR 611 >gi|90410628|ref|ZP_01218644.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK] gi|90328869|gb|EAS45153.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK] Length = 426 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G + IRE+ E+ P + LW SG +D Y + Sbjct: 256 MQQEAPGMVFWHHNGWTIFRELEVFIREKLTEYEYQEVKGPLMMDRVLWERSGHWDKYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGACHRNEPSGALHGIM 374 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 375 RVRGFTQDDAHVF 387 >gi|58699329|ref|ZP_00374107.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|58534152|gb|EAL58373.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] Length = 356 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 3/130 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 R+K L E ++AE H+ + + I + + G W G + + + IR+ Sbjct: 221 RNKDELNAYLECLKEAEKRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRK 280 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 + G E+ P L S +LW +SG +D + + M + + K + P + IF Sbjct: 281 KLINNGYFEVKTPILVSKELWEKSGHWDKFRENMFIVDESESKKLAIKPMNCPCHVQIFN 340 Query: 120 SHIKSYRNLP 129 SH +SYR+LP Sbjct: 341 SHTRSYRDLP 350 >gi|300711550|ref|YP_003737364.1| threonyl-tRNA synthetase [Halalkalicoccus jeotgali B3] gi|299125233|gb|ADJ15572.1| threonyl-tRNA synthetase [Halalkalicoccus jeotgali B3] Length = 640 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 2/134 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + HS G + P G + IR + + G E+ P L +LW ESG D +G Sbjct: 254 VPDHSPGCPHYHPNGMTIRRELEEYIRTQNDALGYEEVRTPELNKKELWEESGHLDFFGS 313 Query: 92 E-MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 E L + N+ P + I+ ++SYR+LP F + +R+E G+ Sbjct: 314 EGEFFLWEENETEYGLKPMNCANHAYIYDQQVRSYRDLPVRFSEFGNVYRNEQSGELSGL 373 Query: 150 MRSREFLMKDAYSF 163 +R R D ++F Sbjct: 374 LRVRGMTQDDGHAF 387 >gi|238882425|gb|EEQ46063.1| threonyl-tRNA synthetase [Candida albicans WO-1] Length = 706 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 2/137 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + ++ S G WLP G + + + +R E + G E+ P + S LW SG + +Y Sbjct: 313 IFNEMSPGSAMWLPHGARIYNTLVDTLRTEYRKRGYEEVITPNMYSTKLWETSGHWQNYK 372 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F+S +SYR LP+ + R+E G+ Sbjct: 373 ENMFSF-EVEKETFGLKPMNCPGHCILFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 431 Query: 150 MRSREFLMKDAYSFDLT 166 R R F DA+ F T Sbjct: 432 TRVRRFQQDDAHIFCTT 448 >gi|68491354|ref|XP_710514.1| hypothetical protein CaO19.5685 [Candida albicans SC5314] gi|46431727|gb|EAK91259.1| hypothetical protein CaO19.5685 [Candida albicans SC5314] Length = 706 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 2/137 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + ++ S G WLP G + + + +R E + G E+ P + S LW SG + +Y Sbjct: 313 IFNEMSPGSAMWLPHGARIYNTLVDTLRTEYRKRGYEEVITPNMYSTKLWETSGHWQNYK 372 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F+S +SYR LP+ + R+E G+ Sbjct: 373 ENMFSF-EVEKETFGLKPMNCPGHCILFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 431 Query: 150 MRSREFLMKDAYSFDLT 166 R R F DA+ F T Sbjct: 432 TRVRRFQQDDAHIFCTT 448 >gi|293604689|ref|ZP_06687089.1| threonine--tRNA ligase [Achromobacter piechaudii ATCC 43553] gi|292816858|gb|EFF75939.1| threonine--tRNA ligase [Achromobacter piechaudii ATCC 43553] Length = 650 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 69/176 (39%), Gaps = 10/176 (5%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G V +R N G E+ P + LW ++G +D+Y + M Sbjct: 264 APGLIFWHPKGWALWQQVEQYMRAIYNNNGYQEVKAPQILDISLWKKTGHWDNYRENMFT 323 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 N +YG P + IF + + SYR LP + + R+E G+MR Sbjct: 324 TESEN---RVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRV 380 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R F D + F T E + +++ G + + + P IG D Sbjct: 381 RGFTQDDGHIF-CTEEQLQDECADFTALLQKVYRDFGFTEVLYKVATRPEKRIGSD 435 >gi|121601812|ref|YP_988945.1| threonyl-tRNA synthetase [Bartonella bacilliformis KC583] gi|166223323|sp|A1USJ2|SYT_BARBK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120613989|gb|ABM44590.1| threonyl-tRNA synthetase [Bartonella bacilliformis KC583] Length = 658 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 17/213 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H+ + R + H + G+ W P G K N+ + +R Sbjct: 233 KAYLNMLEE----AEKRDHRRLGREMDLFHFQEEGPGMIFWHPKGWKMFQNLVSYMRRRL 288 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA----DRNDKAM-IYGPTHEEVMTD 116 + E++ P + LW SG + Y + M + D ND+ + P + Sbjct: 289 DEHKYDEVNAPQVLDKSLWETSGHWGWYQENMFKTIPATNDWNDEHVYALKPMNCPGHVQ 348 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IF+ +KSYR+LP + L R E G+MR R F DA+ F T E Sbjct: 349 IFKHGLKSYRDLPIRLAEFGLLHRYEPSGSLHGLMRVRSFTQDDAHVF-CTDEQLADECL 407 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 K+ L + G + I ++ + P +G D Sbjct: 408 KINDLILSTYADFGFEEIILKLSTRPEKRVGSD 440 >gi|325283002|ref|YP_004255543.1| threonyl-tRNA synthetase [Deinococcus proteolyticus MRP] gi|324314811|gb|ADY25926.1| threonyl-tRNA synthetase [Deinococcus proteolyticus MRP] Length = 650 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 78/391 (19%), Positives = 151/391 (38%), Gaps = 43/391 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I + + + G + P L ++L+ SG +D Y ++M + Sbjct: 268 GLPIWLPSGATIRRELERFIVDVELKNGYQHVYSPALAKSELYKISGHWDHYQEDMFPIM 327 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + ++ P + I+ SYR LP ++ +R E + G+ R R Sbjct: 328 HLDQEELVLRPMNCPHHIQIYAHKPHSYRELPLKIAELGTMYRYEQSGQLTGLSRVRSMT 387 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 + DA+ F P+ + + + ++ LG K R + L D Sbjct: 388 LNDAHIF-CRPDQIQEEFKAVVRMIQEVYEVLGFKDYSYR--------------LSLRDP 432 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP-----YAATSDVHNEKLFDSL 271 +T+ + D M + + +S + V+ + +P Y DV ++ +L Sbjct: 433 QDTEKYYQDDQM---WDTAEAQLREALS-DLGVDYYESPGDAAFYGPKLDV---QVRSAL 485 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIE 330 +++ +S ++ F K+ L + DG M G I M + A + Sbjct: 486 GKDETISTAQLD----FLLPQKFDL----EYVAEDGSRQRPVMIHRGVISTMERMTAFLI 537 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W +AP ++ +I I E++ A L G D +++ + Sbjct: 538 ENTAGNFPFW---LAPRQVMIIPIADRHNAY---AEELRAELVAAGLRAEVDTSSDRMNA 591 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + A+L P+ +IVG K V ++ R Sbjct: 592 KVRDAELKKIPVMLIVGDKEQEARAVSVRER 622 >gi|307292835|ref|ZP_07572681.1| Proline--tRNA ligase [Sphingobium chlorophenolicum L-1] gi|306880901|gb|EFN12117.1| Proline--tRNA ligase [Sphingobium chlorophenolicum L-1] Length = 527 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 71/342 (20%), Positives = 131/342 (38%), Gaps = 73/342 (21%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E V+ F ++S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 133 EEPLVVRPTSETVIGAAFSRWVQSWRDLPVLINQWANVVRWEMRTRM-FLRTAEFLWQEG 191 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ + + + KM Y R F + ++P+ A P Sbjct: 192 HTAHSSVDEAMEETLKMLEVY-RSFAEECV-ALPVIAGEKP------------------- 230 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 EN F ++ SI E + Sbjct: 231 --------------ENERFPGAVATYSI------------------------EAMMQDGK 252 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + GT +S + F+ A+G+ Q S+G+ + R++ +I D G+ Sbjct: 253 ALQAGTSHFLGTTFSSAQNIRFQNAEGQQELAQTTSWGM-STRMIGGLIMVHGDDDGLRV 311 Query: 341 PDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD- 396 P VAP++I ++ + D D C ++ L++ DVF + + + + A A Sbjct: 312 PPRVAPYQIVVVPMLRDTDEDAAVLDYCGELVTELNR--QDVFREPVRALLDRRPAKAAN 369 Query: 397 ------LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G P+ + VG + V+ V + R RED L+ Sbjct: 370 KRWGWVKKGAPVVIEVGGRDVAGGNVSVIRRDRLYREDGKLD 411 >gi|257440090|ref|ZP_05615845.1| threonine--tRNA ligase [Faecalibacterium prausnitzii A2-165] gi|257197442|gb|EEU95726.1| threonine--tRNA ligase [Faecalibacterium prausnitzii A2-165] Length = 611 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 2/136 (1%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +LP G + I+E++ G + + P + + +L+ SG +D Y + M Sbjct: 228 RGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLYKTSGHWDHYRENMFPA 287 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P + I+ + SYR+LP +I FR E G+ R R F Sbjct: 288 MEMEGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIAHDFRYESSGTLKGIERGRHF 347 Query: 156 LMKDAYSFDLTPEGSK 171 DA+ F TPE K Sbjct: 348 CQNDAHLF-CTPEQIK 362 >gi|257124962|ref|YP_003163076.1| threonyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] gi|257048901|gb|ACV38085.1| threonyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] Length = 636 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + +H G ++P G + + + I R E + G E+ P + +LW SG + +Y + Sbjct: 254 VDEHGPGFPFFMPKGVELFNKLQEIWRVEHKKRGYQEIKTPIMLDKELWEISGHWFNY-R 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + ++K P + +++++ SY++LP + ++ L R E G+M Sbjct: 313 ENMYTSTIDEKEYAIKPMNCPGSIIAYKNNLHSYKDLPLKYGEMGLVHRHEFSGALHGLM 372 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 373 RVRAFTQDDAHVF 385 Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 81/161 (50%), Gaps = 17/161 (10%) Query: 284 VGHIFYFGT---KYSLP--MSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDG 335 +G I+ GT ++LP ++ GADG+ H + YG R + +IE Sbjct: 471 IGRIWQCGTIQLDFNLPARFEMSYIGADGEKHEPVMIHRAMYG-SLERFIGILIEHYAGA 529 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 +P +AP + ++ I + +QV ++++ +L G V D E+IG + A Sbjct: 530 ----FPTWLAPVQARILTI-SDEQV--PFAKELFIKLQDAGIRVELDTRVEKIGYKIREA 582 Query: 396 D-LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + + P+Q+I+G V++++V ++ + +++S++E+I Sbjct: 583 NGVQKIPVQLIIGKNEVANNEVNVRRFGSQDSKNVSVDEII 623 >gi|309782526|ref|ZP_07677250.1| threonine--tRNA ligase [Ralstonia sp. 5_7_47FAA] gi|308918863|gb|EFP64536.1| threonine--tRNA ligase [Ralstonia sp. 5_7_47FAA] Length = 580 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I ++S G W P G + +R G E+ P + LW ++G +D Y + Sbjct: 255 IDEYSPGTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQILDKTLWEKTGHWDKY-R 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + I++ IKSYR+LP F + R+E G+M Sbjct: 314 ENMFITESEKREYALKPMNCPGHILIYKQGIKSYRDLPLRFGEFGACHRNEPSGGLHGIM 373 Query: 151 RSREFLMKDAYSF 163 R R F D + F Sbjct: 374 RVRGFTQDDGHIF 386 >gi|290980243|ref|XP_002672842.1| predicted protein [Naegleria gruberi] gi|284086421|gb|EFC40098.1| predicted protein [Naegleria gruberi] Length = 720 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 4/137 (2%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H++S G +LP G + + + IR+E + G E+ P + +LW SG + Y Sbjct: 326 FFHEYSPGTPFFLPHGTRLFNKLVEFIRKEYRKRGYDEVITPQMFQKELWETSGHWQHYK 385 Query: 91 KEMLRLAD---RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 +M + + ++ + P + +F S I+SYR LP R+E R Sbjct: 386 DDMFTVIEGTQHKEETIGIKPMNCPAHCLMFDSKIRSYRELPVRLADFSPLHRNEPRGSL 445 Query: 148 -GVMRSREFLMKDAYSF 163 G+ R R F D++ F Sbjct: 446 TGLTRVRRFHQDDSHIF 462 >gi|256786722|ref|ZP_05525153.1| threonyl tRNA synthetase [Streptomyces lividans TK24] gi|289770616|ref|ZP_06529994.1| threonyl-tRNA synthetase [Streptomyces lividans TK24] gi|289700815|gb|EFD68244.1| threonyl-tRNA synthetase [Streptomyces lividans TK24] Length = 421 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 91/418 (21%), Positives = 164/418 (39%), Gaps = 45/418 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + +RE + R G + P L +L+ SG ++ Y +M Sbjct: 39 GLPYWLPDGAVVRHTLEEYVREAERRAGYRHVYSPVLGKRELYEISGHWEHYRDDMFPPM 98 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM-RSREFL 156 + + ++ P+ ++RS +SYR LP ++ +R E G + R R Sbjct: 99 ELGAEEVVLRPSLCPHHALVYRSRARSYRELPLRIAELGAMYRSEPSGVLGGLSRVRAIH 158 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE-SGPIGGDLSHEFIVLAD 215 + DA+ F TP+ + R LG+++ R GP G +++ + Sbjct: 159 LNDAHIF-CTPDQAAAEARAALGLIRRAHADLGIRAARHRLSLPGPGG-----KYVADPE 212 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 ++ +D +P E VE A Y DV E D+ Sbjct: 213 LWRRATALLEEALDG-LPYEA------------VEGEAAFYGPKIDVQIE---DAAGRES 256 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSH 333 +S I+ FG +Y G DG H V + IG++ R VA +IE +H Sbjct: 257 TLSTVQIDFHQPERFGLRY--------LGPDGARHRPVMVHRSVIGSVERAVAHLIE-AH 307 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV-FWDDMGEQIGSQF 392 G W +AP ++ ++ + R+A + + + +G D +G++ Sbjct: 308 GGAFPAW---LAPVQLVVLPVAG---AQREAAYALVRQATDLGLRAEVADPERGSLGARV 361 Query: 393 AVADLLGFPLQVIVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 A + P Q ++G++ D V+++ R +S E+++ + R P L Sbjct: 362 RAARKV--PYQAVIGAREAQDGDLVDVRLRDGRRPGQLSGTELLHRITDRVEARGPEL 417 >gi|169236481|ref|YP_001689681.1| threonyl-tRNA synthetase [Halobacterium salinarum R1] gi|73921305|sp|Q9HP27|SYT_HALSA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229470722|sp|B0R6G6|SYT_HALS3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|167727547|emb|CAP14335.1| threonine--tRNA ligase [Halobacterium salinarum R1] Length = 640 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G+ L ++ +R + G E+ P L +LW +SG YD+Y +M L Sbjct: 262 GLPLYHPNGKTVLRELSEYVRGLNSEMGYDEVETPHLFRTELWKQSGHYDNYVDDMF-LL 320 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D ND+ P + IF SYR+LP +++ +R E R G+ R F Sbjct: 321 DVNDEEYGLKPMNCPGHATIFNEGSWSYRDLPVRYFEDGKVYRKEQRGELSGLSRVWAFT 380 Query: 157 MKDAYSF 163 + D + F Sbjct: 381 IDDGHVF 387 >gi|158314451|ref|YP_001506959.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec] gi|158109856|gb|ABW12053.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec] Length = 428 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + IR + R G + P L +L+ SG + Y +M Sbjct: 35 GLPYWLPDGAAVRHTLEEYIRTAERRAGYQHVYSPVLGKRELYEISGHWSHYSDDMFPPM 94 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + ++ P+ I+RS SYR+LP ++ +R EL G+ R R Sbjct: 95 DLGGEQIVLRPSLCPHHALIYRSRSHSYRDLPLRIAELGGMYRSELSGVLGGLTRVRAIH 154 Query: 157 MKDAYSF 163 + DA+ F Sbjct: 155 LNDAHIF 161 >gi|295105820|emb|CBL03363.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Gordonibacter pamelaeae 7-10-1-b] Length = 637 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 12/162 (7%) Query: 14 NPRDAEIASHKLMLRTGMIH----QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 N +AE H+ + R I+ G+ +LP G + + + +R + G E+ Sbjct: 231 NLEEAEKRDHRKLGRELGIYVMDPLAGAGLPLYLPKGARIIRTLQEWLRRDLYTRGYEEV 290 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYG--PTHEEVMTDIFRSHI 122 P + +AD+W SG Y Y + M D N + Y P + +++S + Sbjct: 291 ITPHIYNADVWKTSGHYGFYKENMYFFEINEGDDENPRMTEYAVKPMNCPGHVMLYKSEL 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP +++ +R E+ G++R+R F DA+ F Sbjct: 351 HSYRDLPLRYFEFGTVYRHEMSGVVHGLLRARGFTQDDAHVF 392 >gi|241955201|ref|XP_002420321.1| threonyl-tRNA synthetase, cytoplasmic, putative [Candida dubliniensis CD36] gi|223643663|emb|CAX41396.1| threonyl-tRNA synthetase, cytoplasmic, putative [Candida dubliniensis CD36] Length = 706 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 2/137 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + ++ S G WLP G + + + +R E + G E+ P + S LW SG + +Y Sbjct: 313 IFNEMSPGSAMWLPHGARIYNTLVDTLRTEYRKRGYEEVITPNMYSTKLWETSGHWQNYK 372 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F+S +SYR LP+ + R+E G+ Sbjct: 373 ENMFSF-EVEKETFGLKPMNCPGHCILFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 431 Query: 150 MRSREFLMKDAYSFDLT 166 R R F DA+ F T Sbjct: 432 TRVRRFQQDDAHIFCTT 448 >gi|254778840|ref|YP_003056945.1| threonyl-tRNA synthetase [Helicobacter pylori B38] gi|254000751|emb|CAX28675.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Helicobacter pylori B38] Length = 612 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ G + P + +D+W SG YD+Y KE + Sbjct: 238 GLPLWLPKGARLRKRIEDLLSRALLLRGYEPVKGPEILKSDVWKISGHYDNY-KENMYFT 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S + SYR+LP FY+ + R E G++R REF Sbjct: 297 TIDEQEYGIKPMNCVGHIKVYQSTLHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFT 356 Query: 157 MKDAYSF 163 DA+ F Sbjct: 357 QDDAHIF 363 >gi|171463692|ref|YP_001797805.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238689063|sp|B1XV14|SYT_POLNS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|171193230|gb|ACB44191.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 640 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W P G V +R + G E+ P + LW +SG +++Y KE Sbjct: 256 QEEAPGLIFWHPKGWSIWQEVEQYMRRVYQQEGYQEVKAPQILDRGLWEKSGHWENY-KE 314 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + + ++A P + I+ S + SYR LP F + R+E G+MR Sbjct: 315 NMFTTESENRAYALKPMNCPGHVQIYNSGLHSYRELPLRFGEFGQCHRNEPSGALHGLMR 374 Query: 152 SREFLMKDAYSF 163 R F D + F Sbjct: 375 VRGFTQDDGHIF 386 >gi|325912604|ref|ZP_08174987.1| threonine--tRNA ligase [Lactobacillus iners UPII 60-B] gi|325478025|gb|EGC81154.1| threonine--tRNA ligase [Lactobacillus iners UPII 60-B] Length = 643 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 83/408 (20%), Positives = 162/408 (39%), Gaps = 39/408 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M+ P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 379 TLNDGHTF-VELDQVQSEFAKILKLIMEVYRDFDITDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M + DD+ E A Y D+ + +L + Sbjct: 424 PKNTDKYFANDEMWERSQKMLKGAMDDLGLEYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F +++L ++ G DG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFNL----SYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP ++ +I N AH + ++ ++ L K+G D E++G + Sbjct: 533 KGAFPTW---LAPLQVKIIPVNNDAHGEYAQNVKDQ----LMKLGFRSEVDFRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 A P +++G + + V ++ + +E +L E ++ S Sbjct: 586 IREAQTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELS 633 >gi|260891090|ref|ZP_05902353.1| threonine--tRNA ligase [Leptotrichia hofstadii F0254] gi|260859117|gb|EEX73617.1| threonine--tRNA ligase [Leptotrichia hofstadii F0254] Length = 636 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + +H G ++P G + + + I R E + G E+ P + +LW SG + +Y + Sbjct: 254 VDEHGPGFPFFMPKGVELFNKLQEIWRVEHKKRGYQEIKTPIMLDKELWEISGHWFNY-R 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + ++K P + +++++ SY++LP + ++ L R E G+M Sbjct: 313 ENMYTSTIDEKEYAIKPMNCPGSIIAYKNNLHSYKDLPLKYGEMGLVHRHEFSGALHGLM 372 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 373 RVRAFTQDDAHVF 385 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 17/161 (10%) Query: 284 VGHIFYFGT---KYSLP--MSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDG 335 +G I+ GT ++LP ++ GADG+ H + YG R + +IE Sbjct: 471 IGRIWQCGTIQLDFNLPARFEMSYIGADGEKHEPVMIHRAMYG-SLERFIGILIEHYAGA 529 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 +P +AP + ++ I + +QV ++++ +L G V D E+IG + A Sbjct: 530 ----FPTWLAPVQARILTI-SDEQV--PFAKELFTKLQDAGIRVELDTRVEKIGYKIREA 582 Query: 396 DL-LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + P+Q+I+G V++++V ++ + +++S++E+I Sbjct: 583 NGDQKIPVQLIIGKNEVANNEVNVRRFGSQDSKNISVDEII 623 >gi|33592589|ref|NP_880233.1| threonyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|33596580|ref|NP_884223.1| threonyl-tRNA synthetase [Bordetella parapertussis 12822] gi|33601133|ref|NP_888693.1| threonyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|81425212|sp|Q7VY64|SYT_BORPE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81427196|sp|Q7W912|SYT_BORPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81431262|sp|Q7WKF7|SYT_BORBR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33572235|emb|CAE41786.1| threonyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|33573281|emb|CAE37262.1| threonyl-tRNA synthetase [Bordetella parapertussis] gi|33575568|emb|CAE32646.1| threonyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|332382006|gb|AEE66853.1| threonyl-tRNA synthetase [Bordetella pertussis CS] Length = 649 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 144/397 (36%), Gaps = 60/397 (15%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G V +R+ G E+ P + LW ++G +D+Y + M Sbjct: 264 APGLIFWHPKGWALWQQVEQYMRKVYQDNGYQEVKAPQILDLTLWKKTGHWDNYRENMFT 323 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 N +YG P + IF + + SYR LP + + R+E G+MR Sbjct: 324 TESEN---RVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRV 380 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F D + F E F + L +++ G + + + P IG D Sbjct: 381 RGFTQDDGHIF--CTEDQLQDECAAFTALLQKVYKDFGFTEVLYKVATRPEKRIGSD--- 435 Query: 209 EFIVLADTGETQVFCS--KDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + D ET + S + +F I P E + + Sbjct: 436 ---EIWDKAETALMESLRRTGCEFEISPGEGAFYGPKVEYT------------------- 473 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY---VQMGSYGIGAM 322 L D++ R + G I +S+P+ + D D V + +G++ Sbjct: 474 -LKDAI-------GRHWQCGTI---QVDFSMPVRLGAEYVDQNDQRRPPVMLHRAILGSL 522 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ +H G W +AP + + I H + +I L K G V D Sbjct: 523 ERFIGMLIENHAGAMPPW---LAPLQAVVCCISEHSA---EYAAQITQSLKKQGFRVQAD 576 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 GE+I + L P ++VG K + + V ++ Sbjct: 577 LRGEKITRKIREHSLQKIPYLLVVGDKEMQNGTVAVR 613 >gi|189499811|ref|YP_001959281.1| prolyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] gi|259511582|sp|B3EP23|SYP_CHLPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189495252|gb|ACE03800.1| prolyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] Length = 481 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 34/157 (21%), Positives = 76/157 (48%), Gaps = 3/157 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G G ++ F+ +G YV S+G+ + R++ A+I + D +G++ Sbjct: 220 KALQAGTSHNLGQNFAKAFDCQFQSKNGTLEYVWATSWGV-STRLIGALIMAHSDDRGLV 278 Query: 340 WPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVADL 397 P +A ++ ++ I + Q + + L+ G F DD + G +FA +L Sbjct: 279 LPPKLASRQVVIVPILRGDKQAVAEKAHALADELNSNGIHAFVDDSEQNSPGWKFAEYEL 338 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P+++ +G + +S + R TG ++ ++L++ Sbjct: 339 QGIPVRLEIGPRDISSNICIAARRDTGEKQQIALDDT 375 Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E V+ ++ I+SYR+LP Q R E+R R +R+ EFL ++ ++ TP Sbjct: 108 PTSETVIWASYKKWIQSYRDLPLLINQWANVVRWEMRTRL-FLRTSEFLWQEGHTAHATP 166 Query: 168 EGSKHSYNKMFVSY 181 E ++ +M Y Sbjct: 167 EEAQDEVLRMINVY 180 >gi|241948445|ref|XP_002416945.1| threonyl-trna synthetase, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223640283|emb|CAX44533.1| threonyl-trna synthetase, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 455 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 94/430 (21%), Positives = 170/430 (39%), Gaps = 63/430 (14%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 I+S +L+ T S G +LP G + L+ + ++ +Q + G E+ P + L Sbjct: 36 ISSKQLLYTTDPT---SPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLIFKTKL 92 Query: 80 WVESGRYDSYGKEMLRLADR---------NDKAMIYG--PTHEEVMTDIFRSHIKSYRNL 128 W +SG +D+Y +M ++ N + YG P + IF +SY+ L Sbjct: 93 WKKSGHWDNYKDDMFKVVGNDITKEEHTDNIEEHEYGLKPMNCPSHCMIFAKFDRSYQEL 152 Query: 129 PFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF---DLTPEGSKHSYNKMFVSYLRI 184 P + R+E G+ R R F D + F D K++ + + +Y Sbjct: 153 PVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQIDGEIKNTLDLIKDTY--- 209 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G+ I + P +FI DT + K+ ++ N Sbjct: 210 -NVFGINEIEFYLSTRP-----EDKFIGNIDTWDIAELQLKNVLNATAGEGNW------- 256 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 SI E A Y DV + F NK+ I++ F ++ L + G Sbjct: 257 --SIREGDGAFYGPKIDVLLKDAF-----NKKHQVGTIQLD--FQLPNRFEL----KYVG 303 Query: 305 ADGK-DHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVC 361 DGK DH + + G++ A++ + GK WP + P + ++ I ++H V Sbjct: 304 EDGKRDHQPILVHRAVFGSLERFFAILLDHYQGK---WPFWINPRQALIVPINESHVPVA 360 Query: 362 RD----------ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + +C+K A L+ V D GE +G++ A G+ +++G K + Sbjct: 361 EELQKKLSGDIISCDKSIAPLTGFNFHVDVDKRGETVGARTKDAIQKGYSYLIMIGDKDI 420 Query: 412 SDSKVEIKHR 421 ++ ++ R Sbjct: 421 ANGTFAVRSR 430 >gi|15790739|ref|NP_280563.1| threonyl-tRNA synthetase [Halobacterium sp. NRC-1] gi|10581281|gb|AAG20043.1| threonyl-tRNA synthetase [Halobacterium sp. NRC-1] Length = 650 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G+ L ++ +R + G E+ P L +LW +SG YD+Y +M L Sbjct: 272 GLPLYHPNGKTVLRELSEYVRGLNSEMGYDEVETPHLFRTELWKQSGHYDNYVDDMF-LL 330 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D ND+ P + IF SYR+LP +++ +R E R G+ R F Sbjct: 331 DVNDEEYGLKPMNCPGHATIFNEGSWSYRDLPVRYFEDGKVYRKEQRGELSGLSRVWAFT 390 Query: 157 MKDAYSF 163 + D + F Sbjct: 391 IDDGHVF 397 >gi|254431853|ref|ZP_05045556.1| threonyl-tRNA synthetase [Cyanobium sp. PCC 7001] gi|197626306|gb|EDY38865.1| threonyl-tRNA synthetase [Cyanobium sp. PCC 7001] Length = 575 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 85/393 (21%), Positives = 147/393 (37%), Gaps = 45/393 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + RE G + P + LW SG D Y + M Sbjct: 189 GLVFWHPRGARMRLEIENFWREAHFAAGYELLYTPHVADIGLWKTSGHLDFYSESMFGPM 248 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 249 QVDEREYQLKPMNCPFHVLTYASTLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 307 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIV 212 DA+ F L PE + RI R +S + + P IG D + Sbjct: 308 TQDDAHVFCL-PEQISDEILAILDLTERILSRFDFRSYEINLSTRPEKSIGEDAVWQ--- 363 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 LA G + K + + E A Y D+ K+ D++ Sbjct: 364 LATQGLIEALDRKGWA-----------------YKVDEGGGAFYGPKIDL---KIEDAIG 403 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIES 331 + S ++ F ++ L + ADG M I G++ ++ Sbjct: 404 RMWQCSTIQLD----FNLPERFDL----HYVAADGSRQRPIMIHRAIFGSLERFFGIMTE 455 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++ G W +AP +I L+ + D+V R E++ +L G D G+++G Sbjct: 456 NYAGDFPFW---LAPEQIRLLPVT--DEV-RPYAEELLGQLKGAGVRASVDHSGDRLGKL 509 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + P+ ++G+K V ++ R G Sbjct: 510 IRNGEQMKIPVLGVIGAKEAETGSVSLRSRRDG 542 >gi|153004735|ref|YP_001379060.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] gi|152028308|gb|ABS26076.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] Length = 681 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 83/406 (20%), Positives = 156/406 (38%), Gaps = 66/406 (16%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ + G WLP G + + +R ++ G E+ P L + LW +SG + Y + Sbjct: 290 HEVAPGAAFWLPNGTTLYNVLEDAMRRLVSKGGYQEVKTPLLFNKRLWEQSGHWGVYREN 349 Query: 93 MLRLADRNDK---------AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDEL 143 M + D+ +M P + I++ +SYR+LP ++ + R+EL Sbjct: 350 MFLVFDKESDPALPVDERLSMSLKPMNCPSHHLIYKMGKRSYRDLPIRYFTVDTLHRNEL 409 Query: 144 RPRF-GVMRSREFLMKDAYSFDL---TPEGSKHSYNKMFVSY--LRIFHRLGLKSIPMRA 197 G+ R R+F DA+ + + PE M Y + L + P++ Sbjct: 410 SGSLGGLTRVRQFAQDDAHLYLMESQIPEEVSRIVELMKTVYGAFGLEFSLLFSTRPVKP 469 Query: 198 ESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI---PSENTDFD---DIISLNSIVEQ 251 E IG D L D E + + D + P P + + D + +S+ + Sbjct: 470 EDR-IGDD------ALWDKAEGALRAALDRIGLPWQLNPGDGAFYGPKIDFVVTDSLGRK 522 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 W T + +L + PE ++ L T+ G D +H Sbjct: 523 WQ-----TCTI---QLDYAAPE-------------------RFDL----TYVGDDNHEHR 551 Query: 312 -VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V + G+ A++ + G W +AP + ++ + + ++ A Sbjct: 552 PVVIHRAVYGSFERFIAILTEHYAGAFPAW---LAPVQARVVTVSDRFEGW---AREVQA 605 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +L+ G V D+ +++G++ A L P +++G K V V Sbjct: 606 KLATAGWRVELDESSDKLGAKIRNAQLAKIPFALVIGEKEVEAQGV 651 >gi|304415438|ref|ZP_07396087.1| threonyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] gi|304282702|gb|EFL91216.1| threonyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] Length = 652 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 147/397 (37%), Gaps = 51/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHHNGWTIFRELESFVRAKLQEYQYQEVKGPLMMDRLLWAKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 NMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNESSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N ++ G + I ++ + P IG D Sbjct: 375 RVRAFTQDDAHIF-CTEQQVRAEVNNCIAMIYDMYRVFGFEKIEVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 + +EN D ++ N I W A E Sbjct: 432 ---------------------EIWTAAEN-DLAAALTENGIAFDWQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L D L R + G + +SLP + A++ + + M I G++ Sbjct: 470 LHDCLD-------RAWQCGTV---QLDFSLPGRLGASYIDENSQRTVPVMIHRAILGSIE 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +P +AP + +INI D +KI L G V D Sbjct: 520 RFIGILIEEYAG---CFPTWLAPVQAVVINITDKHV---DYAKKISTALQHAGIRVKTDL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFV-SDSKVEIK 419 E++G + L P ++ G K V S +KV ++ Sbjct: 574 RNEKVGLKIREHTLRRVPYMLVCGDKEVESGNKVSVR 610 >gi|294677983|ref|YP_003578598.1| threonyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] gi|294476803|gb|ADE86191.1| threonyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] Length = 648 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 93/431 (21%), Positives = 163/431 (37%), Gaps = 82/431 (19%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R Q G +E++ P + + LW SG +++Y + Sbjct: 260 MQEEAPGQVFWHPNGWTIYTTLQDYMRRRQRADGYVEVNTPQVVNRKLWEASGHWENYRE 319 Query: 92 EMLRL-----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF +KSYR+LP + R E Sbjct: 320 NMFIVEVDEEGAREKVINALKPMNCPCHVQIFNVGLKSYRDLPLRMAEFGSCARYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP--- 201 G+MR R F DA+ F + E + K F+ +L ++ LG ++ + P Sbjct: 380 LHGIMRVRGFTQDDAHIFCM--EDQIEAETKKFIEFLSAVYADLGFDKWRIKLSTRPEKR 437 Query: 202 IGGDLS----------------HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 IG + S HE+ + GE + K ++F + Sbjct: 438 IGTEESWDHAEAALANAVTAAGHEYEIF--EGEGAFYGPK--LEF------------VLT 481 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 ++I W ++ +LPE ++ +I G K+ M Sbjct: 482 DAIGRDW--------QCGTLQVDPNLPER-------LDANYIGPDGAKHRPVML------ 520 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 H +GS+ R + +IE SH GK +W +AP ++ + +I + D Sbjct: 521 ----HRACLGSF----ERFIGILIE-SHAGKLPLW---LAPRQVVVASITSE---ADDYV 565 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 E++ A L G D E+I + L P +G+K V V ++ RL Sbjct: 566 EEVAATLIAAGIRAECDTRNEKINYKVREHSLGKVPYIFAIGAKEVETRTVSVR-RLGDT 624 Query: 426 R-EDMSLEEVI 435 R E ++L+ ++ Sbjct: 625 RTETVALDAIV 635 >gi|260556061|ref|ZP_05828280.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] gi|260410116|gb|EEX03415.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] Length = 640 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 81/415 (19%), Positives = 155/415 (37%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q G E+ P + LW +SG +Y + Sbjct: 255 MQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSESRNYAV-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L++ +W + K+ Sbjct: 431 ----ALWDLAE------KSLAD--------------ALDAAGLEWEL-QPGEGAFYGPKI 465 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLPM---SATFKGADGKDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP+ ++ + +D V + +G+ Sbjct: 466 EFSLKDC---------LGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P ++P + ++NI +A E++ A+L + G Sbjct: 517 FERFIGILIEHYAG---FMPPWLSPVQACVMNITDSQA---EASEQVVAKLKENGLRAIS 570 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P +++G + V + V ++ R MS++ I+ Sbjct: 571 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFID 625 >gi|256397192|ref|YP_003118756.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] gi|256363418|gb|ACU76915.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] Length = 480 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 4/147 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GT ++ F G+ S+G+ + R+V I + D KG+ Sbjct: 222 GKALQSGTTHYLGTNFAKAFGIQFADDAGRLELCHTTSWGM-STRLVGGTIMTHGDDKGL 280 Query: 339 IWPDSVAPFKISLINIKAHDQ--VCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVA 395 + P +AP+++ ++ I DQ A ++ RL G V DD + G +F Sbjct: 281 VLPPKLAPYQVVIVPIARGDQAETVLAAVRELAGRLKAAGIRVHVDDRPQVSPGFKFNDW 340 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ G PL++ +G + ++ + RL Sbjct: 341 EMRGVPLRLEIGPRDLAAGTALLAKRL 367 Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E V+ ++ I SYR+LP Q R ELRPR +R+ EFL ++ Sbjct: 104 EEPLVLRPTSETVIGEMMAKWISSYRDLPLLLNQWANVVRWELRPRL-FLRTTEFLWQEG 162 Query: 161 YS 162 ++ Sbjct: 163 HT 164 >gi|55377088|ref|YP_134938.1| prolyl-tRNA synthetase [Haloarcula marismortui ATCC 43049] gi|74579418|sp|Q5V5H0|SYP_HALMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|55229813|gb|AAV45232.1| proline-tRNA synthetase [Haloarcula marismortui ATCC 43049] Length = 484 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 9/160 (5%) Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +P+ K V A Y GT + T+ AD +++ S+G+ + R + A+I Sbjct: 222 MPDGKTVQA-----ATSHYLGTSFGEAFDITYADADEEENTAHTTSWGL-SWRAMGALIM 275 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCR--DACEKIYARLSKVGCDVFWDDMGEQ- 387 + D +G++ P ++AP ++ ++ I D D + A L + V DD + Sbjct: 276 THSDDQGLVLPPALAPDQVVVVPIWQEDNKDEVIDYAADLAAELDEADVRVELDDREHRN 335 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 G ++ +L G PL+V +G V D + + HR G E Sbjct: 336 PGFKYNEHELHGVPLRVEIGPHEVEDGEATLVHRPDGETE 375 >gi|320109353|ref|YP_004184943.1| threonyl-tRNA synthetase [Terriglobus saanensis SP1PR4] gi|319927874|gb|ADV84949.1| threonyl-tRNA synthetase [Terriglobus saanensis SP1PR4] Length = 676 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 83/395 (21%), Positives = 150/395 (37%), Gaps = 45/395 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +R+E R G + P + +LW SG YG+ M Sbjct: 294 GLIFWHPNGAIIRKTMEDWMRDECLRRGYDLVVTPHVMRRELWQISGHEGFYGQNMYAPM 353 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +D P + I+++ KSYR+LP + ++ +R E G++R R F Sbjct: 354 ELDDAEYRLKPMNCPGHILIYKNSPKSYRDLPVRYAELGNVYRYERSGTMHGLLRVRGFT 413 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F TP + + H+ G +EF V T Sbjct: 414 QDDAHIF-CTPAQIEDEVVACVEFAEEVLHKFGF-----------------NEFKVELST 455 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + +K ++ P E + L + + + PY ++ E F + Sbjct: 456 WDPN--DAKHYVGDPKDWELA----VNGLKTALNRKNIPY---KEIPGEAAF----YGPK 502 Query: 277 VSARGIEV-GHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVI 329 + + ++V G ++ T ++LP + G DG+ H M + G++ V+ Sbjct: 503 IDVKLVDVLGRLWQLSTVQFDFNLPRRFELEYTGEDGEKHQPVMVHRALFGSVERFFGVL 562 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + G +W +AP +I L+ I + +K L +G V D E++ Sbjct: 563 IEHYAGAFPLW---LAPIQIGLVPISEKHTAYAETVKK---ELEAIGLRVTLDARNEKMN 616 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ L P +I+G K V ++ R G Sbjct: 617 AKIRDLTLQKVPFVLIMGDKEAEAKAVSVRTRGKG 651 >gi|313902061|ref|ZP_07835474.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] gi|313467670|gb|EFR63171.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] Length = 638 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G W P G + RE Q R G E+ P + DLW SG ++ Y M Sbjct: 259 APGYAFWHPKGATVYGLLEQFSRELQARYGYQEVRTPEILKVDLWHRSGHWEHYRDNMF- 317 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L +R D P + ++RS I+SYR+LP + R E G++R R Sbjct: 318 LIEREDALFGVKPMNCPGHCLLYRSRIRSYRDLPLRLAEYGRLARFERSGTLHGLLRVRG 377 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 378 FEQDDAHLF 386 >gi|315126513|ref|YP_004068516.1| threonyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] gi|315015027|gb|ADT68365.1| threonyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] Length = 636 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 81/396 (20%), Positives = 144/396 (36%), Gaps = 48/396 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W G + +RE+ E+ P + LW +SG ++ Y + Sbjct: 257 QEEAPGMVFWHNDGWSIYRELEEFVREKLREYQYEEVKGPMMMDRSLWEKSGHWEKYSEA 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + I P + IF +KSYR+LP + R+E G+MR Sbjct: 317 MFTTESEKREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALHGLMR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F DA+ F T E + + G + I ++ + P IG D Sbjct: 376 VRGFTQDDAHVF-CTEEQIMDEVSACIKMVYDTYETFGFEKIVVKLSTRPEQRIGED--- 431 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 E A+ + D +P E + I L+ Sbjct: 432 EMWDKAELALADALKANDIEFDYLPGEGAFYGPKIEFT--------------------LY 471 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVV 325 D L R + G + ++LP + AT+ + + M I G++ Sbjct: 472 DCLD-------RAWQCGTV---QLDFALPGRLGATYVAENNERRTPVMIHRAILGSIERF 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G ++P +AP ++ ++NI ++I +L+K+G D Sbjct: 522 IGILTEEYAG---LFPTWLAPKQVVIMNITDKQA---PYVQEIVQKLNKLGIRAAADLRN 575 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG K V +V ++ R Sbjct: 576 EKIGFKIREHTLKRIPYLLVVGDKEVEQQEVAVRTR 611 >gi|169634342|ref|YP_001708078.1| threonyl-tRNA synthetase [Acinetobacter baumannii SDF] gi|238688108|sp|B0VKJ4|SYT_ACIBS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169153134|emb|CAP02213.1| threonyl-tRNA synthetase [Acinetobacter baumannii] Length = 640 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 81/415 (19%), Positives = 155/415 (37%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q G E+ P + LW +SG +Y + Sbjct: 255 MQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSESRNYAV-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L++ +W + K+ Sbjct: 431 ----ALWDLAE------KSLAD--------------ALDAAGLEWEL-QPGEGAFYGPKI 465 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLPM---SATFKGADGKDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP+ ++ + +D V + +G+ Sbjct: 466 EFSLKDC---------LGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P ++P + ++NI +A E++ A+L + G Sbjct: 517 FERFIGILIEHYAG---FMPPWLSPVQACVMNITDSQA---EASEQVVAKLKENGLRAIS 570 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P +++G + V + V ++ R MS++ I+ Sbjct: 571 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFID 625 >gi|156042356|ref|XP_001587735.1| hypothetical protein SS1G_10975 [Sclerotinia sclerotiorum 1980] gi|154695362|gb|EDN95100.1| hypothetical protein SS1G_10975 [Sclerotinia sclerotiorum 1980 UF-70] Length = 791 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G WLP G + + + + +REE + G E+ P + +++LW SG + Y Sbjct: 339 FFHELSPGSAMWLPHGARIYNTIQSFLREEYWKRGYNEVITPNMYNSELWKTSGHWAYYK 398 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +M D P + +F +S+R LP+ + R+E G+ Sbjct: 399 DDMFTFPVEKD-VFALKPMNCPGHCLMFGHRERSHRELPWRVADFGVLHRNEASGALTGL 457 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 458 TRVRRFQQDDAHIF 471 >gi|62078811|ref|NP_001014062.1| threonyl-tRNA synthetase, mitochondrial precursor [Rattus norvegicus] gi|81884372|sp|Q68FW7|SYTM_RAT RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; AltName: Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor gi|51259375|gb|AAH79154.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Rattus norvegicus] Length = 723 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 92/427 (21%), Positives = 161/427 (37%), Gaps = 58/427 (13%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E R G E+ PT Sbjct: 301 EAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRIYNALVAFIRAEYARRGFSEVKTPT 360 Query: 74 LQSADLWVESGRYDSYGKEMLRL----------------ADRNDKAMIYGPTHEEVMTDI 117 L S LW +SG ++ Y M L A + P + + Sbjct: 361 LFSTKLWEQSGHWEHYRAHMFSLKPPGTDGVDSSQSGHPARCPKDTLALKPMNCPAHCLM 420 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 F +S+R LP + R E G+ R F DA+ F + + Sbjct: 421 FAHRPRSWRELPVRLADFGVLHRAEASGSLGGLTRLWRFQQDDAHIF--CAPSQLEAEIR 478 Query: 177 MFVSYLR-IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + +LR ++ LG S + + P G F+ GE ++ D + + Sbjct: 479 GCLDFLRSVYSVLGF-SFHLALSTRPPG------FL-----GEPHLW---DQAEKVLQQA 523 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 +F + +LN A Y DVH L D+L + ++ F +Y Sbjct: 524 LEEFGEPWNLNPGD---GAFYGPKIDVH---LHDALGRPHQCGTIQLDFQLPLRFDLQYK 577 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 P A + V + +G++ + V+ S G+ WP ++PF++ +I ++ Sbjct: 578 GP-------AGAPECPVLIHRAVLGSVERLLGVLAESCGGR---WPLWLSPFQVVVIPVR 627 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + D ++ L G D D G + + A L + Q +VG + S Sbjct: 628 TEQE---DYARQVQQCLQAAGLVSDLDADCGLTLSRRVRRAQLAHYNFQFVVGQREQSQM 684 Query: 415 KVEIKHR 421 V ++ R Sbjct: 685 SVNVRTR 691 >gi|257095791|ref|YP_003169432.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048315|gb|ACV37503.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 641 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 5/174 (2%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G W P G + +R Q R +E++ P + LW SG + +Y + M Sbjct: 259 APGSVFWHPKGWALFQQLIGYMRTRQERADYVEVNTPDVMDRGLWETSGHWFNYREAMFT 318 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +++ P + +F +KSYR+LP + R E G++R R Sbjct: 319 TTTEDERVFALKPMNCPGAVSLFAQRLKSYRDLPLRMAEFGKVHRYEPSGSLHGLLRVRH 378 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 F DA+ F + + + + + I+ G + ++ + P IG D Sbjct: 379 FTQDDAHIFCTAAQMQDECASTIALVFA-IYRDFGFDDVAVKLSTRPANRIGSD 431 >gi|169797157|ref|YP_001714950.1| threonyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|184156915|ref|YP_001845254.1| threonyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|215484620|ref|YP_002326855.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|239500701|ref|ZP_04660011.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB900] gi|301510743|ref|ZP_07235980.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB058] gi|332856896|ref|ZP_08436305.1| threonine--tRNA ligase [Acinetobacter baumannii 6013150] gi|332867201|ref|ZP_08437466.1| threonine--tRNA ligase [Acinetobacter baumannii 6013113] gi|332874008|ref|ZP_08441943.1| threonine--tRNA ligase [Acinetobacter baumannii 6014059] gi|226701398|sp|B7H005|SYT_ACIB3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238685492|sp|A3M299|SYT_ACIBT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238688031|sp|B0V5P2|SYT_ACIBY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690968|sp|B2HTH0|SYT_ACIBC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169150084|emb|CAM87978.1| threonyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|183208509|gb|ACC55907.1| Threonyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|193076379|gb|ABO11043.2| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] gi|213985706|gb|ACJ56005.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|322506811|gb|ADX02265.1| thrS [Acinetobacter baumannii 1656-2] gi|323516680|gb|ADX91061.1| threonyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715] gi|332726950|gb|EGJ58455.1| threonine--tRNA ligase [Acinetobacter baumannii 6013150] gi|332734140|gb|EGJ65272.1| threonine--tRNA ligase [Acinetobacter baumannii 6013113] gi|332737749|gb|EGJ68641.1| threonine--tRNA ligase [Acinetobacter baumannii 6014059] Length = 640 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 81/415 (19%), Positives = 155/415 (37%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q G E+ P + LW +SG +Y + Sbjct: 255 MQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSESRNYAV-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L++ +W + K+ Sbjct: 431 ----ALWDLAE------KSLAD--------------ALDAAGLEWEL-QPGEGAFYGPKI 465 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLPM---SATFKGADGKDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP+ ++ + +D V + +G+ Sbjct: 466 EFSLKDC---------LGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P ++P + ++NI +A E++ A+L + G Sbjct: 517 FERFIGILIEHYAG---FMPPWLSPVQACVMNITDSQA---EASEQVVAKLKENGLRAIS 570 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P +++G + V + V ++ R MS++ I+ Sbjct: 571 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFID 625 >gi|57640485|ref|YP_182963.1| prolyl-tRNA synthetase [Thermococcus kodakarensis KOD1] gi|74503571|sp|Q5JF49|SYP_PYRKO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|57158809|dbj|BAD84739.1| prolyl-tRNA synthetase [Thermococcus kodakarensis KOD1] Length = 481 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 5/124 (4%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+ WLP G K + N+ I E RTG E+ P L + E+ + E+ Sbjct: 33 KGMNVWLPYGLKIMRNIERFIHAEMERTGHDEVLFPALIPETEFQKEAEHIKGFEGEVYW 92 Query: 96 LADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + D +I PT E M +F I+S+ +LPF YQI +R E + ++R Sbjct: 93 VTHAGLEPLDVRLILRPTSETAMYSMFSLWIRSHADLPFKIYQIVNVYRYETKHTRPLIR 152 Query: 152 SREF 155 RE Sbjct: 153 VREI 156 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 13/165 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + + ++ + ++ G YV ++G+ R++AAVI D +G+ Sbjct: 221 GRTLQIGTMHNYRQNFAKAYNIQYETETGDHEYVHQTTFGMSE-RLLAAVIAIHGDDRGM 279 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYAR-----LSKVGCDVFWDDMGEQIGSQFA 393 + P ++AP ++ ++ I D +A YAR L G V D+ + G ++ Sbjct: 280 VLPPTIAPIQVVIVPIPKKDS---EADVFAYAREIAEELRTAGIRVHVDERDIRPGRKYY 336 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLT----GIREDMSLEEV 434 +L G PL++ VG + V K + R T + D +EEV Sbjct: 337 DWELKGVPLRIEVGPRDVEGKKAVLARRDTLEKITVERDNIVEEV 381 >gi|317969695|ref|ZP_07971085.1| threonyl-tRNA synthetase [Synechococcus sp. CB0205] Length = 590 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 89/427 (20%), Positives = 159/427 (37%), Gaps = 85/427 (19%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + + RE G + P + LW SG D Y + M Sbjct: 207 GLVFWHPRGARMRLLIENLWRELHFNAGYELLYTPHVADISLWKTSGHLDFYSESMFGPM 266 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 267 QVDEREYQLKPMNCPFHVLTYASTLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 325 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 DA+ F L PE +S E + + D Sbjct: 326 TQDDAHVFCL-PE------------------------------------QISDEILAILD 348 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 E Q+ + DF ++ I+L++ E+ + A D+ + L ++L + Sbjct: 349 LTE-QILSTFDFRNYE-----------INLSTRPEK-SIGEDAVWDLATQGLIEAL--ER 393 Query: 276 RVSARGIEVGHIFYFGTK---------------------YSLP--MSATFKGADGKDHYV 312 + A I+ G ++G K ++LP + ADG Sbjct: 394 KGWAYKIDEGGGAFYGPKIDLKIEDAIGRMWQCSTVQLDFNLPERFDLEYVAADGSRQRP 453 Query: 313 QMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 M I G++ ++ ++ G W +AP +I L+ + D+V A E + A Sbjct: 454 IMIHRAIFGSLERFFGIMTENYAGDFPFW---LAPEQIRLLPVT--DEVTGYA-ESVAAA 507 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G D G+++G + + P+ ++G+K + ++ R G + L Sbjct: 508 LKAAGVRASVDHSGDRLGKLIRNGEQMKIPVLGVIGAKEAEGGTISLRSRREGDLGSIEL 567 Query: 432 EEVINYA 438 E V+ A Sbjct: 568 ETVVAAA 574 >gi|307169877|gb|EFN62386.1| Threonyl-tRNA synthetase, cytoplasmic [Camponotus floridanus] Length = 689 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 87/414 (21%), Positives = 160/414 (38%), Gaps = 56/414 (13%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G + P G + + IR E + G E+ P + ++ LW SG + Y + Sbjct: 303 HELSPGSCFFQPRGAYIYNTLVEFIRSEYRKRGFQEVISPNIYNSKLWQTSGHWQHYAEN 362 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D + P + IF +S+R LP + R+EL G+ R Sbjct: 363 MFSF-DVEKETFALKPMNCPGHCMIFDVRCRSWRELPLRMADFGVLHRNELSGALTGLTR 421 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F + E K ++M + + H G+ F Sbjct: 422 VRRFQQDDAHIF-CSVEQIK---DEMIAALEFLRHVYGI---------------FGFTFN 462 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDVHNE 265 + T + S D + SLN+ + WT A Y D+ Sbjct: 463 LCLSTRPEKYLGSLKVWDRAEKALEE------SLNAFGQPWTLNPQDGAFYGPKIDI--- 513 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SATFKGADG-KDHYVQMGSYGIGAM 322 L D+L + + ++ + LPM + ++ +G K V + +G++ Sbjct: 514 TLMDALKRAHQTATIQLD----------FQLPMRFNLSYVNENGEKTRPVIIHRAILGSV 563 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFW 381 + A++ S+ GK WP ++P + ++ + + D+ + +K++ V D Sbjct: 564 ERMIAILTESYGGK---WPYWLSPRQAMVVPVVSQFDEYAYEVKQKLWDAGVMVEVDT-- 618 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D + + + A L F ++VG K + V I+ R + +M++EE+I Sbjct: 619 -DSSDTLNKKIRNAQLAQFNFILVVGEKERNAGTVNIRTRDNVVHGEMAVEELI 671 >gi|308068694|ref|YP_003870299.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) [Paenibacillus polymyxa E681] gi|305857973|gb|ADM69761.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) [Paenibacillus polymyxa E681] Length = 482 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 80/164 (48%), Gaps = 10/164 (6%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y GT +++ + + + S+G + R++ A+I D +G+ Sbjct: 225 GRAVQAGTSHYMGTNFAVAFDIKYLSRENNLEFAHTTSWGT-STRLIGALIMVHGDDRGL 283 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAV 394 P VAP ++ ++ I K D V A ++++A L + G V DD + G +F Sbjct: 284 ALPPKVAPTQVIMVPIGPPKKRDAVIARA-DELFAELKQAGVRVKMDDRSDVSPGWKFNE 342 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTG----IREDMSLEEV 434 ++ G P+++ +G + + + + R++G +++D +EEV Sbjct: 343 YEMRGVPVRMEIGPRDMENGVCVLVSRISGEKKIVQQDNLVEEV 386 >gi|152989860|ref|YP_001355582.1| threonyl-tRNA synthetase [Nitratiruptor sp. SB155-2] gi|151421721|dbj|BAF69225.1| threonyl-tRNA synthetase [Nitratiruptor sp. SB155-2] Length = 613 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 9/142 (6%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM--LR 95 G+ WLP G + + +++ + G + P + +DLW +SG Y +Y + M Sbjct: 231 GLPIWLPKGARLRSKLESLLFAAHRKRGYEPVRGPEILKSDLWKKSGHYQNYKENMYFTE 290 Query: 96 LAD---RNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + D + + + YG P + I++S +SYR LP F++ + R E G+ Sbjct: 291 ICDDETKKETCVEYGIKPMNCVGHIMIYKSKKRSYRELPLKFFEYGVVHRHEKSGVLHGL 350 Query: 150 MRSREFLMKDAYSFDLTPEGSK 171 R REF DA+ F PE K Sbjct: 351 FRVREFTQDDAHIF-CKPEQIK 371 >gi|220934623|ref|YP_002513522.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] gi|259516780|sp|B8GRI1|SYT_THISH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219995933|gb|ACL72535.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] Length = 643 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + + R G + P + + DLW SG D Y + M Sbjct: 262 GLVFWHPKGARIRRAIEQFWFDMHERAGYQFLYTPHIANLDLWKTSGHADFYSESMYEPM 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +++A P + +++ + SYR+LP + ++ +R E+ G+MR R F Sbjct: 322 EDDNQAFQLKPMNCPFHVLVYKDRLHSYRDLPLRWAEMGTVYRREMSGALHGLMRVRGFT 381 Query: 157 MKDAYSF 163 DA+ F Sbjct: 382 QDDAHIF 388 >gi|296446450|ref|ZP_06888394.1| threonyl-tRNA synthetase [Methylosinus trichosporium OB3b] gi|296256085|gb|EFH03168.1| threonyl-tRNA synthetase [Methylosinus trichosporium OB3b] Length = 643 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 1/132 (0%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + G W G ++ + +R Q G E++ P + LW SG + +Y + Sbjct: 257 QEEGPGTIFWHEKGWALFQSLVSYMRRRQKAAGYKEVNTPQVLDRALWETSGHWQTYREN 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +++ P + IF++ +KSYR+LP + + R E G+MR Sbjct: 317 MFLTKTEDERIFALKPMNCPGHVQIFKNGLKSYRDLPVKIAEFGIVHRYEPSGALHGMMR 376 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 377 VRAFTQDDAHIF 388 >gi|163857146|ref|YP_001631444.1| threonyl-tRNA synthetase [Bordetella petrii DSM 12804] gi|229557977|sp|A9IRH6|SYT_BORPD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|163260874|emb|CAP43176.1| thrS [Bordetella petrii] Length = 650 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 6/131 (4%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G V +R N G E+ P + LW ++G +D+Y + M Sbjct: 264 APGLIFWHPKGWALWQQVEQYMRAVYNDNGYQEVKAPQILDLSLWKKTGHWDNYRENMFT 323 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 N +YG P + IF + + SYR LP + + R+E G+MR Sbjct: 324 TESEN---RVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRV 380 Query: 153 REFLMKDAYSF 163 R F D + F Sbjct: 381 RGFTQDDGHIF 391 >gi|126640661|ref|YP_001083645.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] Length = 549 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 81/415 (19%), Positives = 155/415 (37%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q G E+ P + LW +SG +Y + Sbjct: 164 MQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAE 223 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +KSYR+LP + R+E G+M Sbjct: 224 NMFTTHSESRNYAV-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 282 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 283 RVRGFTQDDAHIF-CTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDD-- 339 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L++ +W + K+ Sbjct: 340 ----ALWDLAE------KSLAD--------------ALDAAGLEWELQ-PGEGAFYGPKI 374 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLPM---SATFKGADGKDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP+ ++ + +D V + +G+ Sbjct: 375 EFSLKDC---------LGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGS 425 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P ++P + ++NI +A E++ A+L + G Sbjct: 426 FERFIGILIEHYAG---FMPPWLSPVQACVMNITDSQA---EASEQVVAKLKENGLRAIS 479 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P +++G + V + V ++ R MS++ I+ Sbjct: 480 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFID 534 >gi|152993995|ref|YP_001359716.1| threonyl-tRNA synthetase [Sulfurovum sp. NBC37-1] gi|166225510|sp|A6QD00|SYT_SULNB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|151425856|dbj|BAF73359.1| threonyl-tRNA synthetase [Sulfurovum sp. NBC37-1] Length = 604 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 3/132 (2%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G K + I+ + + P + AD+W SG Y YG+ M L Sbjct: 230 GLPFWMPQGAKLRYKLEQILHKAHLVRDYEPVRGPEILKADMWRTSGHYACYGENMY-LT 288 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + + P + IF+ KSYR+LP +Y+ + R E G++R REF Sbjct: 289 EIDGQEYGIKPMNCIGHIQIFKQTQKSYRDLPVKYYEYGVVHRHEKSGVLHGLLRVREFT 348 Query: 157 MKDAYSFDLTPE 168 DA+ F PE Sbjct: 349 QDDAHIF-CAPE 359 >gi|310640050|ref|YP_003944808.1| ser-tRNA(thr) hydrolase / threonyl-tRNA synthetase [Paenibacillus polymyxa SC2] gi|309245000|gb|ADO54567.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Paenibacillus polymyxa SC2] Length = 637 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 3/138 (2%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP G + R+ Q G E+ P + + LW +SG Y+ Y Sbjct: 257 MFSEEAPGMPFYLPKGMVVRTALEDYSRDIQRLHGYEEVRTPLMMNNRLWEQSGHYEHY- 315 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + ++ ++ P + +F++ + SYR+LP + R EL G+ Sbjct: 316 KENMYFSEVDETTFALKPMNCPGHMLVFKNELHSYRDLPIRISEFGQVHRHELSGALNGM 375 Query: 150 MRSREFLMKDAYSFDLTP 167 MR R F DA+ F +TP Sbjct: 376 MRVRTFCQDDAHIF-VTP 392 >gi|260940036|ref|XP_002614318.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238852212|gb|EEQ41676.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 722 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G + + + ++REE + G E+ P + + LW SG + +Y + M Sbjct: 330 SPGSAFWLPHGTRIYNTLVDMLREEYRQRGYEEVITPNMYNTKLWEISGHWGNYKENMFS 389 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D + P + +F+S +SYR LP+ + R+E G+ R R Sbjct: 390 FEVEKDTFGL-KPMNCPGHCVLFKSRERSYRELPWRVADFGVVHRNEFSGALSGLTRVRR 448 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 449 FQQDDAHIF 457 >gi|70607289|ref|YP_256159.1| prolyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] gi|114152265|sp|Q4J8L4|SYP_SULAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|68567937|gb|AAY80866.1| bifunctional aminoacyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] Length = 483 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 12/165 (7%) Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 FD++ + RV +++G + + G ++ + DG Y SYGI RV+A Sbjct: 215 FDTIMPDSRV----LQIGTVHHLGQHFTKAFDLKVQRKDGTLDYPHQTSYGISD-RVIAV 269 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV----GCDVFWD- 382 + + D G I +AP K +I I A D+ + + ++K+ G + D Sbjct: 270 AVSINGDDHGTILSPVLAPIKAVIIPIPAKDEKETEKIIEYSEDVAKILVSNGINTVIDK 329 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR--LTGI 425 D + G ++ + ++ G PL++ +G + +S + V IK R L GI Sbjct: 330 DTEKTPGEKYYIWEIKGVPLRIEIGPRELSSNSVFIKRRDTLQGI 374 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 6/163 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY-DSYGKEMLR 95 KG+ WLP G K +IR+ + G E+ P L DL G + + E+ Sbjct: 34 KGMGVWLPYGFKIRQAAVDLIRKLLDAKGHEEVLFPLLVPEDLLRREGEHIKGFESEVFW 93 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + + D + PT E +T + ++SY+ LP +YQI FR E + ++R Sbjct: 94 VTKGGEENLDIRLALRPTSETAITYMETYWVQSYKQLPKKYYQIVSVFRYETKATRPMIR 153 Query: 152 SREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 RE K+A++ T E ++ + Y F LG+ I Sbjct: 154 LREVSTFKEAHTLHETYEDAERQVKEAIEIYKNFFEELGIPYI 196 >gi|331087229|ref|ZP_08336299.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408915|gb|EGG88376.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 479 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 1/131 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ + + K YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFGIQYTDKENKLQYVHQTSWGM-TTRMIGAIIMVHGDNSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ +I I+ D ++ L K G V DD + G +F+ ++ Sbjct: 284 VLPPRIAPVQVMVIPIQQKKDGVLDKAYEVKEVLKKAGLSVKVDDSDKSPGWKFSEQEMR 343 Query: 399 GFPLQVIVGSK 409 G P+++ +G K Sbjct: 344 GIPVRIELGPK 354 >gi|295687966|ref|YP_003591659.1| threonyl-tRNA synthetase [Caulobacter segnis ATCC 21756] gi|295429869|gb|ADG09041.1| threonyl-tRNA synthetase [Caulobacter segnis ATCC 21756] Length = 658 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 7/179 (3%) Query: 17 DAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H+ + +T I + KG+ W P G + +R + G E+ P Sbjct: 243 EAEKRDHRKLGKTMDLFHIQEEGKGMVFWHPKGWALYRVLEDYMRRRLDAAGYKEVKTPQ 302 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + +G M + + P + IF KSYR LP Sbjct: 303 ILDKSLWEKSGHAEKFGHAMFMCESAEGEVLAVKPMNCPGHIQIFNVGQKSYRELPLRMA 362 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGL 190 + R E G+MR R F DA+ F + ++ S F+ LR +++ LG+ Sbjct: 363 EFGACHRYEPSGAMHGIMRVRAFTQDDAHIFCREEQVTEESAR--FIELLRSVYNDLGM 419 >gi|300712094|ref|YP_003737908.1| prolyl-tRNA synthetase [Halalkalicoccus jeotgali B3] gi|299125777|gb|ADJ16116.1| prolyl-tRNA synthetase [Halalkalicoccus jeotgali B3] Length = 482 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 4/146 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ T+ D ++ S+G+ + R + A+I + D +G+ Sbjct: 225 GKSVQGGTSHHLGQSFAEAFDITYVDEDEEETVAHTTSWGL-SWRAIGALIMTHSDDQGL 283 Query: 339 IWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ-IGSQFAVA 395 + P +VAP ++ ++ I + + + + E I L + G V DD E+ G +F Sbjct: 284 VLPPTVAPEQVVIVPIWQEENREEVLEYSEGIADDLEEAGFRVELDDRDERNPGFKFNEW 343 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHR 421 +LLG PL++ +G V D +V HR Sbjct: 344 ELLGTPLRLEIGPHEVEDGEVTAVHR 369 >gi|255262353|ref|ZP_05341695.1| threonyl-tRNA synthetase [Thalassiobium sp. R2A62] gi|255104688|gb|EET47362.1| threonyl-tRNA synthetase [Thalassiobium sp. R2A62] Length = 649 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 82/401 (20%), Positives = 143/401 (35%), Gaps = 54/401 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q G +E++ P + LW SG ++ Y + Sbjct: 261 MQEEAPGQVFWHPNGWTVYTELQDYMRRKQRAGGYVEVNTPQVVDRKLWEASGHWEKYQE 320 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF +KSYR+LP + R E Sbjct: 321 NMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGA 380 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGG 204 G+MR R F D + F E +++ +L I+ LG + ++ P Sbjct: 381 LHGIMRVRGFTQDDGHIF--CREDQVQEETAVYIEFLSTIYKDLGFEKFRVKYSDRPDTR 438 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 S E + D E + + + N+ +E P + Sbjct: 439 AGSDE---VWDKAEQALLTA-------------------TRNAGIEPEMNP--GEGAFYG 474 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYG 318 KL L + +G + GT + LP + AT+ G DG H V + Sbjct: 475 PKLEFVLTD---------AIGRDWQCGTHQVDFVLPERLDATYIGTDGGKHRPVMLHRAT 525 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G+ ++ H GK W +AP ++ + I + D +I L G Sbjct: 526 LGSFERFIGILIEEHAGKLPFW---LAPRQVVVTTIVSD---ADDFAAEIVETLRSKGVR 579 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + L P+ + +G + V + V ++ Sbjct: 580 AEADTRNEKINYKVREHSLAKVPVILAIGQREVDERTVSVR 620 >gi|257067150|ref|YP_003153406.1| threonyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] gi|256799030|gb|ACV29685.1| threonyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] Length = 640 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 91/412 (22%), Positives = 161/412 (39%), Gaps = 45/412 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ G + P G ++ + + N G E+ P + + DLW SG +D Y KE Sbjct: 257 HEEGPGFPFFHPNGMILMNELLGWWTDVLNENGYGEIKTPLILNEDLWHRSGHWDHY-KE 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + + +A P + + S+ SYR+LP + R EL G+ R Sbjct: 316 NMYFTKIDGEAYAIKPMNCPGSVLTYASNQHSYRDLPIRLAEYGQVHRHELSGTLHGLFR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEF 210 R F DA+ + L + + Y + ++ L ++ G K +I + GD+ Sbjct: 376 VRTFTQDDAHVYCLPSQIKEEVYRMIDLADL-LYSTFGFKYTIELSTRPDDFMGDIKD-- 432 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D E Q+ K + I E D A Y D H L D+ Sbjct: 433 ---WDFAEDQL--KKALEERGIEYEINPGD------------GAFYGPKIDFH---LLDA 472 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMS--ATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 + R + G I + LP + T+ +G K V + +G++ Sbjct: 473 -------AKREWQCGTI---QLDFQLPQNFDLTYIDENGEKQRPVMLHRALLGSIERFIG 522 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 V+ G+ +W + P ++ +I + D+ D CE + ++ + G V D E Sbjct: 523 VLTEHFAGRFPLW---LNPQQVEIIPVS--DKFI-DYCEDLKEKIKEAGFRVNIDYRSEG 576 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 +G + A L+ ++VG K + K+ +++R D+S++E I S Sbjct: 577 VGYKIRQAQLMRTNYMLVVGEKEETSGKLTVRNRDGEETADVSVDEFIEKIS 628 >gi|260802092|ref|XP_002595927.1| hypothetical protein BRAFLDRAFT_268618 [Branchiostoma floridae] gi|229281179|gb|EEN51939.1| hypothetical protein BRAFLDRAFT_268618 [Branchiostoma floridae] Length = 681 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 86/417 (20%), Positives = 161/417 (38%), Gaps = 57/417 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + I+EE ++ G E+ P + + LW SG +D Y Sbjct: 289 FFHELSPGSCFFLPKGAHIYNKLIDYIKEEYHKRGFQEVVSPNMYNVKLWKTSGHWDHYE 348 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + ++ +S+R LP + R+EL G+ Sbjct: 349 ENMFSF-EVEKETFALKPMNCPGHCLMYDVRPRSWRELPLRMADFGVLHRNELSGTLTGL 407 Query: 150 MRSREFLMKDAYSFDLTP------EGSKHSYNKMFVSY---LRIFHRLGLKSIPMRAESG 200 R R F DA+ F EG N ++ ++ L++F L + P +A Sbjct: 408 TRVRRFQQDDAHIFCTMEQLEDEIEGCLEFMNSIYTTFGFDLKLF----LSTRPEKA--- 460 Query: 201 PIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS 260 IG + D E + + D P D A Y Sbjct: 461 -IGDKET------WDRAEKHLASALDKFGMPWKLNPGD--------------GAFYGPKI 499 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 D+ ++FD+L + + ++ + F Y D K V + +G Sbjct: 500 DI---QVFDALRRAHQCATIQLDFNNPERFNLTY------VSGDGDEKKRPVMIHRAILG 550 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG--CD 378 ++ A++ + GK WP ++P + ++ + + DQ + +K+ + + G C+ Sbjct: 551 SVERFIAILCENFGGK---WPFWLSPRQAMIVPV-SPDQ--NEYAQKVRNSIHEAGFMCE 604 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D G+ + + A L + ++VG K V V ++ R + + S+E+VI Sbjct: 605 ADCDP-GDTMNKKIRNAQLAQYNFIMVVGKKEVESGTVNVRTRDNKVHGERSVEDVI 660 >gi|134299469|ref|YP_001112965.1| threonyl-tRNA synthetase [Desulfotomaculum reducens MI-1] gi|189083605|sp|A4J4Y7|SYT_DESRM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|134052169|gb|ABO50140.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Desulfotomaculum reducens MI-1] Length = 635 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 86/403 (21%), Positives = 153/403 (37%), Gaps = 55/403 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G + P G + + R+E + G E+ P + + +W +SG + Y Sbjct: 255 IQEEGPGFPFFHPKGMVLRNELENFWRQEHKKRGYQEIRTPIILNRSMWEQSGHWAHYKD 314 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + ++++ + SYR+LP + ++ L R EL G+ Sbjct: 315 NMYFTKIDEADYAV--KPMNCPGSILVYKTRMHSYRDLPLRWGELGLVHRHELSGALHGL 372 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 MR R F DA+ F + P K + + ++ GL + R E +G D Sbjct: 373 MRVRCFTQDDAHIF-MLPSQIKDEIIGVIDLFDYFYNTFGLNYHVELSTRPEKS-MGSD- 429 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 E +A +K MD+ + + F Y D H Sbjct: 430 --EMWEVATNSLRDALEAKK-MDYKVNEGDGAF----------------YGPKIDFH--- 467 Query: 267 LFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM 322 L DSL R + G I F +++L + G DG+ H V + G++ Sbjct: 468 LTDSL-------GRTWQCGTIQLDFQMPERFNL----NYVGEDGQKHRPVMIHRVVFGSI 516 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFW 381 ++ G +W +AP ++ ++ I H + R+ + RL + V Sbjct: 517 ERFIGILTEHFAGAFPVW---LAPVQVKVLPITDRHHEYARE----LVKRLQGLDIRVEL 569 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 D E+I + A P +++G + + V ++ R G Sbjct: 570 DARNEKINYKIREAQTQKIPYMLVIGDREMEQGAVAVRERGKG 612 >gi|78048351|ref|YP_364526.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325927169|ref|ZP_08188432.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas perforans 91-118] gi|123743902|sp|Q3BRT7|SYT_XANC5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78036781|emb|CAJ24474.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325542482|gb|EGD13961.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas perforans 91-118] Length = 634 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 77/394 (19%), Positives = 141/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 256 LQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 316 AMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F L + + L ++ G I ++ P +G D + Sbjct: 375 RVRGFTQDDGHVFCLESQ-IESEVTAFHQQALAVYTAFGFDDIQIKIALRPEKRLGDDAT 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A V C ++ + P A Y + H L Sbjct: 434 WDKAEAALRSALGV-CGVEWQELPGEG-------------------AFYGPKIEYH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 471 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G +P +AP ++ + NI D+ K L+ G V D E+ Sbjct: 524 ILIEHHAGA---FPSWLAPVQVVVANITDAQAEYVDSVRKT---LANQGFRVSADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++VG + + V ++ R Sbjct: 578 IGYKIREHTLQRVPYLLVVGDREKENGAVAVRTR 611 >gi|308067332|ref|YP_003868937.1| Threonyl-tRNA synthetase 2 (threonine--tRNA ligase) (ThrRS) [Paenibacillus polymyxa E681] gi|305856611|gb|ADM68399.1| Threonyl-tRNA synthetase 2 (Threonine--tRNA ligase) (ThrRS) [Paenibacillus polymyxa E681] Length = 637 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 3/138 (2%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP G + R+ Q G E+ P + + LW +SG Y+ Y Sbjct: 257 MFSEEAPGMPFYLPKGMVVRTALEDYSRDIQRLHGYEEVRTPLMMNNRLWEQSGHYEHY- 315 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + ++ ++ P + +F++ + SYR+LP + R EL G+ Sbjct: 316 KENMYFSEVDETTFALKPMNCPGHMLVFKNELHSYRDLPIRIAEFGQVHRHELSGALNGM 375 Query: 150 MRSREFLMKDAYSFDLTP 167 MR R F DA+ F +TP Sbjct: 376 MRVRTFCQDDAHIF-VTP 392 >gi|148239112|ref|YP_001224499.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7803] gi|166225511|sp|A5GJT7|SYT_SYNPW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|147847651|emb|CAK23202.1| Threonyl-tRNA synthetase [Synechococcus sp. WH 7803] Length = 610 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 82/393 (20%), Positives = 150/393 (38%), Gaps = 45/393 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ G + P + LW SG D Y + M Sbjct: 229 GLVFWHPRGARMRLLIEEFWRQAHFEGGYELLYTPHVADISLWKTSGHLDFYAESMFGPM 288 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 + +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 289 EVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 347 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIV 212 DA+ F L PE K+ RI + + + P IG D + Sbjct: 348 TQDDAHVFCL-PEQISDEILKILDLTERILSTFDFNTYEINLSTRPEKSIGDDAVWD--- 403 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 LA G + K + I E A Y D+ K+ D++ Sbjct: 404 LATKGLIEALERKGWA-----------------YKIDEGGGAFYGPKIDL---KIEDAIG 443 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIES 331 + S ++ F ++ L + ADG M I G++ ++ Sbjct: 444 RMWQCSTIQLD----FNLPERFKL----DYIAADGSKQRPIMIHRAIFGSLERFFGIMTE 495 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++ G +W +AP ++ L+ + D+V + E + +L++ G D G+++G Sbjct: 496 NYAGDYPLW---LAPEQVRLLPVT--DEV-QPYAESLLDQLTQAGVRATIDRSGDRLGKL 549 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + P+ ++G+K + V ++ R G Sbjct: 550 IRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDG 582 >gi|77360339|ref|YP_339914.1| threonyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] gi|76875250|emb|CAI86471.1| threonyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] Length = 636 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 83/396 (20%), Positives = 147/396 (37%), Gaps = 48/396 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W G + +RE+ E+ P + LW +SG ++ Y Sbjct: 257 QEEAPGMVFWHNDGWSIYRELEDFVREKLREYDYEEVKGPMMMDRSLWEKSGHWEKYADA 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + I P + IF +KSYR+LP + R+E G+MR Sbjct: 317 MFTTVSEKREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALHGLMR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSH 208 R F DA+ F T E + + G + I ++ + P IG D Sbjct: 376 VRGFTQDDAHIF-CTEEQIMDEVSACIKMVYDTYETFGFEKIVVKLSTRPEQRIGEDHMW 434 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + LA E +F D+ +P E + I L+ Sbjct: 435 DKAELA-LAEALKLNEIEF-DY-LPGEGAFYGPKIEFT--------------------LY 471 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVV 325 D L R + G + ++LP + AT+ + + M I G++ Sbjct: 472 DCLD-------RAWQCGTV---QLDFALPGRLGATYVAENNERRTPVMIHRAILGSIERF 521 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G ++P +AP ++ ++NI D +++ +L+K+G D Sbjct: 522 IGILTEEYAG---LFPTWLAPKQVVIMNITDKQA---DYVKEVVQKLNKLGIRATADLRN 575 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG K V +V ++ R Sbjct: 576 EKIGFKIREHTLKRIPYLLVVGDKEVEQQEVAVRTR 611 >gi|224417829|ref|ZP_03655835.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253827169|ref|ZP_04870054.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|313141370|ref|ZP_07803563.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253510575|gb|EES89234.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|313130401|gb|EFR48018.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 605 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 6/129 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + N+ ++ + + G + P + + +W SG Y +YG+ M Sbjct: 231 GLPIWLPKGARLRRNIERLLTKALIQRGYEPVRGPEILKSAVWKTSGHYSNYGENMYFTT 290 Query: 98 DRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + YG P + +++S ++SYR+LP FY+ + R E G++R RE Sbjct: 291 ---IDGVEYGIKPMNCVGHIKVYQSALRSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVRE 347 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 348 FTQDDAHIF 356 >gi|262374306|ref|ZP_06067582.1| threonyl-tRNA synthetase [Acinetobacter junii SH205] gi|262310864|gb|EEY91952.1| threonyl-tRNA synthetase [Acinetobacter junii SH205] Length = 640 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 82/418 (19%), Positives = 151/418 (36%), Gaps = 60/418 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q G E+ P + LW +SG +Y + Sbjct: 255 MQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSESRNYAV-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 L D E + + D P E + I + Sbjct: 431 ----ALWDLAEKSLADALDDAGLAWDLQPGEGAFYGPKIEFS------------------ 468 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLPM---SATFKGADGKDHYVQMGSYG 318 L D L G ++ GT ++LP+ ++ + +D V + Sbjct: 469 --LKDCL-------------GRVWQCGTIQCDFNLPIRLDASYVTEENERDQPVMLHRAI 513 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G+ ++ + G P +AP + ++NI +A E++ A+L + G Sbjct: 514 LGSFERFIGILIEHYAG---FMPPWLAPVQACVMNITDSQA---EASEQVVAKLKENGLR 567 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P +++G + V + V ++ R MS++ I+ Sbjct: 568 AISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFID 625 >gi|257387444|ref|YP_003177217.1| threonyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] gi|257169751|gb|ACV47510.1| threonyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] Length = 640 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G+ L+ ++ + + G E+ P + +LW +SG YD+Y +M L Sbjct: 262 GLPLYEPNGKTVLNELSEYVADLNREAGYDEVETPHVFRTELWKKSGHYDNYVDDMF-LL 320 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D ND+ P + IF SYR+LP +++ +R E R G+ R+ F Sbjct: 321 DVNDEEYGLKPMNCPGHATIFDQKSWSYRDLPIRYFEDGKVYRKEQRGELSGLSRTWSFT 380 Query: 157 MKDAYSF 163 + D + F Sbjct: 381 IDDGHLF 387 >gi|149030652|gb|EDL85689.1| threonyl-tRNA synthetase-like 1, isoform CRA_a [Rattus norvegicus] Length = 617 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 92/425 (21%), Positives = 159/425 (37%), Gaps = 57/425 (13%) Query: 18 AEIASHKLMLRTGMI--HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 +I + KL+ + H+ S G +LP G + + + A IR E R G E+ PTL Sbjct: 197 GQIGALKLLTEQELFFFHELSPGSCFFLPRGTRIYNALVAFIRAEYARRGFSEVKTPTLF 256 Query: 76 SADLWVESGRYDSYGKEMLRL----------------ADRNDKAMIYGPTHEEVMTDIFR 119 S LW +SG ++ Y M L A + P + +F Sbjct: 257 STKLWEQSGHWEHYRAHMFSLKPPGTDGVDSSQSGHPARCPKDTLALKPMNCPAHCLMFA 316 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +S+R LP + R E G+ R F DA+ F + + Sbjct: 317 HRPRSWRELPVRLADFGVLHRAEASGSLGGLTRLWRFQQDDAHIF--CAPSQLEAEIRGC 374 Query: 179 VSYLR-IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + +LR ++ LG S + + P G F+ GE ++ D + + Sbjct: 375 LDFLRSVYSVLGF-SFHLALSTRPPG------FL-----GEPHLW---DQAEKVLQQALE 419 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 +F + +LN A Y DVH L D+L + ++ F +Y P Sbjct: 420 EFGEPWNLNPGD---GAFYGPKIDVH---LHDALGRPHQCGTIQLDFQLPLRFDLQYKGP 473 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 A + V + +G++ + V+ S G+ WP ++PF++ +I ++ Sbjct: 474 -------AGAPECPVLIHRAVLGSVERLLGVLAESCGGR---WPLWLSPFQVVVIPVRTE 523 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + D ++ L G D D G + + A L + Q +VG + S V Sbjct: 524 QE---DYARQVQQCLQAAGLVSDLDADCGLTLSRRVRRAQLAHYNFQFVVGQREQSQMSV 580 Query: 417 EIKHR 421 ++ R Sbjct: 581 NVRTR 585 >gi|325663708|ref|ZP_08152112.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|325470201|gb|EGC73434.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] Length = 492 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 1/131 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ + + K YV S+G+ R++ A+I D G+ Sbjct: 238 GKALQSGTSHNFGDGFAKAFGIQYTDKENKLQYVHQTSWGM-TTRMIGAIIMVHGDNSGL 296 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ +I I+ D ++ L K G V DD + G +F+ ++ Sbjct: 297 VLPPRIAPVQVMVIPIQQKKDGVLDKAYEVKEVLKKAGLSVKVDDSDKSPGWKFSEQEMR 356 Query: 399 GFPLQVIVGSK 409 G P+++ +G K Sbjct: 357 GIPVRIELGPK 367 >gi|294636227|ref|ZP_06714641.1| threonine--tRNA ligase [Edwardsiella tarda ATCC 23685] gi|291090484|gb|EFE23045.1| threonine--tRNA ligase [Edwardsiella tarda ATCC 23685] Length = 622 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 87/414 (21%), Positives = 152/414 (36%), Gaps = 54/414 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y Sbjct: 236 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKAYQYQEVKGPFMMDRVLWEKTGHWENYKD 295 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 296 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 355 RVRGFTQDDAHIF-CTEEQIRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 411 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 + D E + + + P P E + I Sbjct: 412 ----EIWDRAEEDLAAALEENGIPFEYQPGEGAFYGPKIEFT------------------ 449 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 L D L R + G + +SLP ++A++ G + + M I G+ Sbjct: 450 --LHDCLD-------RAWQCGTV---QLDFSLPGRLNASYVGENNERVVPVMIHRAILGS 497 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 M ++ G +P +AP + ++NI + E++ +L G Sbjct: 498 MERFIGILTEEFAG---FFPTWLAPVQAVVMNITDSQA---EYVEELNKKLQAAGIRAKS 551 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + L P ++ G K V KV ++ R MS+++VI Sbjct: 552 DLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGVMSIDDVI 605 >gi|217967413|ref|YP_002352919.1| threonyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] gi|217336512|gb|ACK42305.1| threonyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] Length = 638 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G + R+E + G + P L A+LW SG +D+Y + M L Sbjct: 258 GLIFYPPKGAMLRLIIEEFERKEHLKRGYFPVITPHLMQAELWKRSGHWDNYRENMFFL- 316 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFL 156 DK P + I+ S ++SYR+LP F+++ +R E +G+ R+R F Sbjct: 317 QVEDKDYAVKPMNCPGHILIYNSKVRSYRDLPLRFFEMGTVYRYERSGVLYGLERARGFT 376 Query: 157 MKDAYSF 163 DA+ F Sbjct: 377 QDDAHIF 383 >gi|317487879|ref|ZP_07946471.1| threonyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|325830610|ref|ZP_08164031.1| threonine--tRNA ligase [Eggerthella sp. HGA1] gi|316913005|gb|EFV34522.1| threonyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|325487356|gb|EGC89798.1| threonine--tRNA ligase [Eggerthella sp. HGA1] Length = 637 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 22/167 (13%) Query: 14 NPRDAEIASHKLMLRTGMIHQHSK----GIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 N +AE H+ + R I+ G+ +LP G + + + +R + G E+ Sbjct: 231 NLEEAEKRDHRKLGRELGIYTMDPLAGVGLPMYLPKGARVIRTMQEWLRRDLYERGYEEV 290 Query: 70 SVPTLQSADLWVESGRYDSYGKEML------------RLADRNDKAMIYGPTHEEVMTDI 117 P + +AD+W SG Y Y + M RL + K M P H VM + Sbjct: 291 ITPHVYNADVWKTSGHYGFYKENMYFFNINEGTDEDPRLTEYAVKPM-NCPGH--VM--L 345 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 ++S + SYR+LP +++ +R E+ G++R+R F DA+ F Sbjct: 346 YKSELHSYRDLPLRYFEFGTVYRHEMSGVVHGLLRARGFTQDDAHVF 392 >gi|301633230|gb|ADK86784.1| proline--tRNA ligase [Mycoplasma pneumoniae FH] Length = 483 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 70/333 (21%), Positives = 126/333 (37%), Gaps = 68/333 (20%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 ++ PT E ++++ SY+NLP + Q FR E R +R+ EF ++ + Sbjct: 119 LVLRPTSEIAFCNLWKKQSFSYQNLPVIYNQWTCVFRAEKNTR-PFLRNSEFYWQETH-- 175 Query: 164 DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 GL S + +ES I ++ I++ C Sbjct: 176 -------------------------GLFSDGVNSESAAIAFWKLYQDIIVNQ------LC 204 Query: 224 SKDFMDFPIPSEN-TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 F+ P+E + ++ SI+ A ATS H+ Sbjct: 205 IPAFVGLKSPNERFAGAQNTWTVESIMPDGQALQCATS--HD------------------ 244 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 G ++ P TF+ + S GI + R++ A++ + D G+I P Sbjct: 245 -------LGQTFTKPFGLTFQNQANQQAIPYSFSCGI-STRILGALLLTHSDDFGLILPW 296 Query: 343 SVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 VAP ++ L K D + +K+ L ++ + + Q+G Q ++ G P Sbjct: 297 KVAPIQVKLYLFDKKGDTKTVELAQKVQTLLEQLAIRFQFIKVENQLGKQLGQGEVNGIP 356 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 Q+IV + V I +RLT ++ S E++ Sbjct: 357 FQLIVD----NPQTVNIFNRLTRVKTAYSFEQL 385 >gi|237653686|ref|YP_002890000.1| threonyl-tRNA synthetase [Thauera sp. MZ1T] gi|237624933|gb|ACR01623.1| threonyl-tRNA synthetase [Thauera sp. MZ1T] Length = 638 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 15/175 (8%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H+KG W V +R G E+ P + LW +SG + Y Sbjct: 261 GMVFWHAKGWTLW--------QQVEQYLRRTIGEHGYQEVKTPQIVDRSLWEKSGHWGMY 312 Query: 90 GKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M +++ D A+ P + IF +KSYR+LP + R+E Sbjct: 313 SDLMFTTQSEKRDYAV--KPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 370 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP 201 G+MR R F+ DA+ F E + + F+ L +++ G + ++ + P Sbjct: 371 GIMRVRNFVQDDAHIF--CAESQVQAESAEFIRLLQQVYQDFGFTDVQVKLSTRP 423 >gi|146328703|ref|YP_001209437.1| threonyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] gi|166223338|sp|A5EVK6|SYT_DICNV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146232173|gb|ABQ13151.1| threonyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] Length = 640 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 8/136 (5%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + G E+ P + LW +SG +D +G Sbjct: 256 LQEEAPGMVFWHAKGWTIYREIENYMRTKLRKYGYQEVQGPQILDRSLWEKSGHWDKFGG 315 Query: 92 EMLRLA-DRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M D +D A+ + P H IF +KSYR LP + + + R+E Sbjct: 316 NMFTCCIDNHDFAVKPMNCPGH----VQIFNQGLKSYRELPIRYAEFGICHRNEPSGTLH 371 Query: 148 GVMRSREFLMKDAYSF 163 G+MR R F+ D + F Sbjct: 372 GIMRVRRFVQDDGHIF 387 >gi|118595089|ref|ZP_01552436.1| Threonyl-tRNA synthetase, class IIa [Methylophilales bacterium HTCC2181] gi|118440867|gb|EAV47494.1| Threonyl-tRNA synthetase, class IIa [Methylophilales bacterium HTCC2181] Length = 635 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 10/135 (7%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H KG WL V +R+ G E+ PT+ LW +SG +++Y Sbjct: 261 GMVFWHPKGWSLWLA--------VEDYMRQMFKDYGYKEIKTPTIIDKSLWEKSGHWENY 312 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M A N + P + ++F + + SYR+LP + R+E G Sbjct: 313 QDNMFTTASEN-RVYAVKPMNCPGHVEVFNNTLHSYRDLPLRLAEFGSCHRNEPSGALHG 371 Query: 149 VMRSREFLMKDAYSF 163 +MR R F DA+ F Sbjct: 372 LMRVRGFTQDDAHIF 386 >gi|50306435|ref|XP_453191.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642325|emb|CAH00287.1| KLLA0D02772p [Kluyveromyces lactis] Length = 461 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 9/158 (5%) Query: 36 SKGIYSWLPLGQKALDNVNAIIR-EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 S G +LP G K + + + ++ ++QN+ G E+ P + LW +SG +++Y +M Sbjct: 58 SPGSIFFLPNGTKIFNKLVSFMKLQQQNKYGFQEVVTPLIYRKTLWEQSGHWENYKDDMF 117 Query: 95 RLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 R+ + YG P + +F+ +SY LP F R+E G+ R Sbjct: 118 RVEGNDVSKEEYGLKPMNCPGHCVVFKRFDRSYNELPLRFSDFSPLHRNEASGALSGLTR 177 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMF----VSYLRIF 185 R+F D + F TP+ + K + Y ++F Sbjct: 178 VRKFHQDDGHIF-CTPDQVRQEIQKCLELVDMCYTKVF 214 >gi|257791654|ref|YP_003182260.1| threonyl-tRNA synthetase [Eggerthella lenta DSM 2243] gi|257475551|gb|ACV55871.1| threonyl-tRNA synthetase [Eggerthella lenta DSM 2243] Length = 637 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 22/167 (13%) Query: 14 NPRDAEIASHKLMLRTGMIHQHSK----GIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 N +AE H+ + R I+ G+ +LP G + + + +R + G E+ Sbjct: 231 NLEEAEKRDHRKLGRELGIYTMDPLAGVGLPMYLPKGARVIRTMQEWLRRDLYERGYEEV 290 Query: 70 SVPTLQSADLWVESGRYDSYGKEML------------RLADRNDKAMIYGPTHEEVMTDI 117 P + +AD+W SG Y Y + M RL + K M P H VM + Sbjct: 291 ITPHVYNADVWKTSGHYGFYKENMYFFNINEGTDEDPRLTEYAVKPM-NCPGH--VM--L 345 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 ++S + SYR+LP +++ +R E+ G++R+R F DA+ F Sbjct: 346 YKSELHSYRDLPLRYFEFGTVYRHEMSGVVHGLLRARGFTQDDAHVF 392 >gi|312881548|ref|ZP_07741334.1| threonyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309370825|gb|EFP98291.1| threonyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 642 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 79/207 (38%), Gaps = 18/207 (8%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ +RE+ E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFVREKLTEYDYQEVKGPLIMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRN-DKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M A N D A+ + P H IF +KSYR+LP + R+E Sbjct: 317 AMFTTASENRDYALKPMNCPGH----VQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH 372 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGG 204 G+MR R F DA+ F T + + G +I ++ + P +G Sbjct: 373 GIMRVRGFTQDDAHIF-CTESQIQEEVTSCIKMVYDTYETFGFSNIAVKLSTRPEKRVGS 431 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFP 231 D + D E + S + MD P Sbjct: 432 D------EIWDESEQALKQSLEAMDIP 452 >gi|166711588|ref|ZP_02242795.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 634 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 78/394 (19%), Positives = 141/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 256 LQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 316 AMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F L + + L ++ G I ++ P +G D + Sbjct: 375 RVRGFTQDDGHVFCLESQ-IESEVTAFHQQALAVYTAFGFDDIQIKIALRPEKRLGDDAT 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A V C ++ + P A Y + H L Sbjct: 434 WDKAEAALRSALGV-CGVEWQELPGEG-------------------AFYGPKIEYH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 471 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G +P +AP ++ + NI DA K L+ G V D E+ Sbjct: 524 ILIEHHAGA---FPSWLAPVQVVVANITDAQADYVDAVRKT---LANQGFRVSADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++VG + + V ++ R Sbjct: 578 IGYKIREHMLQRVPYLLVVGDREKENGAVAVRTR 611 >gi|51892640|ref|YP_075331.1| prolyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] gi|81826140|sp|Q67PA6|SYP_SYMTH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|51856329|dbj|BAD40487.1| prolyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] Length = 488 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 5/161 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G ++ F D + YV S+G+ + R++ A+I D +G+ Sbjct: 225 GKALQAGTSHYLGQNFAKGFEIKFLDRDNQLKYVHTTSWGV-STRLIGALIMVHGDDRGL 283 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 P +AP ++ +I + K D+V + ++ L G V D E G +F Sbjct: 284 ALPPRLAPIQVIMIPVGPPKFRDKVM-ARFDPLFDALKAAGVRVKADLREETPGWKFNEW 342 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 ++ G PL++ +G + V + + + R TG + + L+E + Sbjct: 343 EMRGVPLRIEIGPRDVDNKQCLMVRRDTGEKIPVPLDEAVE 383 >gi|110639601|ref|YP_679811.1| prolyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] gi|122966540|sp|Q11Q45|SYP_CYTH3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|110282282|gb|ABG60468.1| prolyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] Length = 491 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 5/148 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ F +G YV S+G+ + R++ A+I + D +G++ Sbjct: 234 KALQAGTSHFLGQNFAKAFDVKFASKEGSLEYVWGTSWGV-STRLMGALIMAHSDDEGLV 292 Query: 340 WPDSVAPFKISLINI-KAHDQV--CRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVA 395 P +AP ++ ++ I K +Q+ + I A L V +D + G +FA Sbjct: 293 LPPLLAPIQVVIVPIFKTAEQLDLIEATLKPILAALKAKDISVKFDHSDKYSPGFKFAEY 352 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +L G PL+V +G++ + + VE+ R T Sbjct: 353 ELKGVPLRVAIGARDIENGTVELARRDT 380 Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ +I PT E V+ + +++ I+S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 115 DEELIVRPTSETVIWNTYKTWIQSHRDLPLLINQWANVVRWEMRTRL-FLRTTEFLWQEG 173 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T + + +M Y Sbjct: 174 HTAHATKQEAIVETEQMMNVY 194 >gi|293392211|ref|ZP_06636545.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952745|gb|EFE02864.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 643 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 89/420 (21%), Positives = 157/420 (37%), Gaps = 48/420 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +YG Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + P+ + I+ G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIFCM-PDQVESEVTSCIKMVYDIYSTFGFENIKVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E D E+ I E A Y + L Sbjct: 432 ----EMWDKAEA---------DLAKALEHNGLS-----YEIQEGEGAFYGPKLEF---AL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 DSL R + G I + LP ++A++ G D + M I G++ Sbjct: 471 TDSLD-------REWQCGTI---QLDFFLPERLNASYVGEDNERKIPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +I + G +W +AP + ++NI + +K+ +LS G V D Sbjct: 521 FIGIITEEYAGFFPVW---LAPTQAVVMNITDSQS---EYVQKVAKQLSDAGLRVKTDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 E++G + L P ++ G K + KV ++ R ++EE ++ + N Sbjct: 575 NEKVGFKIREHTLHRVPYMLVCGDKEIEAGKVAVRTRKGQDLGTFTVEEFLDILKKQVRN 634 >gi|261880448|ref|ZP_06006875.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361] gi|270332871|gb|EFA43657.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361] Length = 521 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 89/420 (21%), Positives = 152/420 (36%), Gaps = 67/420 (15%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM--- 93 KG+ WLP G + + ++R+ E+ P + S +L+V SG Y YGK+ Sbjct: 134 KGLPIWLPKGTQLRLRLQELLRKLLKPYNYQEVIAPGIGSKNLYVTSGHYAHYGKDAFQP 193 Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 +R + +++ M+ P + +I+ +SY++LP + R E G+ R Sbjct: 194 IRTPEEDEEYML-KPMNCPHHCEIYARKPRSYKDLPLRIAEFGTVMRYEKSGELHGLTRV 252 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F + PE K + + ++F G + + I Sbjct: 253 RSFTQDDAHIF-VRPEQVKAEFENVIDIIQKVFAIFGFDNYEAQ--------------IS 297 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 L D +T + D E W A + EK + Sbjct: 298 LRDPKDTDKYIGSD-----------------------EIWEESQNAIREACQEKGMKARE 334 Query: 273 ENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYG 318 E + G + +G + GT Y+LP + D K V + Sbjct: 335 EIGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFKLEYTAEDNSKQVPVMIHRAP 394 Query: 319 IGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G++ AV+ G +W PD VA IS + D ++ Sbjct: 395 FGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKFNDYALEVKKHFDAND 446 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + DD E+IG + +L P VIVG K ++ V ++ + G + M + + I Sbjct: 447 VRAYIDDRNEKIGRKIRDNELKRVPYMVIVGEKEANEGLVSMRKQGGGEQASMKITDFIQ 506 >gi|149057085|gb|EDM08408.1| threonyl-tRNA synthetase-like 2, isoform CRA_a [Rattus norvegicus] Length = 790 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 88/416 (21%), Positives = 165/416 (39%), Gaps = 59/416 (14%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y Sbjct: 403 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNN 462 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 463 MFTFDIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLTGLTR 521 Query: 152 SREFLMKDAYSFDLTPE------GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 R F DA+ F + + G H ++ ++ F +L L + P Sbjct: 522 VRRFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGFSF-QLNLSTRP----------- 569 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 F+ GET+++ D + + + T F +N A Y D+ Sbjct: 570 --EHFL-----GETEIW---DEAERQLQNSLTGFGKPWKINPGD---GAFYGPKIDI--- 613 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 K+ D++ + + ++ F +++L + K D K+ V + +G++ + Sbjct: 614 KIKDAIGRYHQCATIQLD----FQLPIRFNLTYVS--KDGDDKNRPVIIHRAILGSVERM 667 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG------CDV 379 A++ ++ GK WP ++P ++ +I + ACE ++SK DV Sbjct: 668 IAILSENYGGK---WPLWLSPRQVMIIPVGP-------ACENYALQVSKECFEEGFMADV 717 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD + + A L + ++VG K ++ V ++ R I ++S+ VI Sbjct: 718 DLDDSC-TLNKKIRNAQLAQYNFILVVGEKEKLNNSVNVRTRDNKIHGEISITSVI 772 >gi|87122885|ref|ZP_01078753.1| threonyl-tRNA synthetase [Marinomonas sp. MED121] gi|86161836|gb|EAQ63133.1| threonyl-tRNA synthetase [Marinomonas sp. MED121] Length = 572 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 77/197 (39%), Gaps = 11/197 (5%) Query: 17 DAEIASH-KLMLRTGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL + + HQ + G+ W G + IR++Q G E+ P Sbjct: 238 EAEKRDHRKLGKKLDLFHQQEEAPGMVFWHHKGWSLYQTIEQYIRQKQRENGYQEIKTPQ 297 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG + + M N I P + ++ +KSYR+LP Sbjct: 298 IVDRVLWEKSGHWGKFSSGMFTTHAENRDYAI-KPMNCPCHVQVYNQGLKSYRDLPLRLA 356 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLK 191 + R+E G+MR R F+ D + F + E F+ L I+ G Sbjct: 357 EFGSCHRNEPSGSLHGIMRVRNFVQDDGHIFVM--EDQIQEEVSAFIKLLHEIYDDFGFT 414 Query: 192 SIPMRAESGP---IGGD 205 I R + P +G D Sbjct: 415 DIIYRLSTRPEQRVGSD 431 >gi|256826891|ref|YP_003150850.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Cryptobacterium curtum DSM 15641] gi|256583034|gb|ACU94168.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Cryptobacterium curtum DSM 15641] Length = 586 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 89/398 (22%), Positives = 151/398 (37%), Gaps = 48/398 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ G WLP G + + + E Q G ++ P + S LW SG +D Y Sbjct: 206 MMADEGPGFPFWLPNGMRLKNALTQYWMEMQEAYGYEQVDTPIILSRKLWETSGHWDHY- 264 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +D+ P + I++S +SYR+LP + R EL+ G+ Sbjct: 265 KENMYTTVIDDEDYAVKPMNCPGACLIYKSKPRSYRDLPLKLAEAGKDHRHELKGALHGL 324 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE--SGPIGGDLS 207 R R F DA+ F + P+ + + G P R E + P S Sbjct: 325 FRVRAFTQDDAHLF-IRPDQITEQVTDTAHLITAYYEQFGF---PYRVELSTRPDDSMGS 380 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E LA+ G Q + + D+ +LN E A Y D H L Sbjct: 381 DEDWALAEEGLRQA----------LEAMGVDY----TLN---EGDGAFYGPKIDFH---L 420 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMS--ATFKGADG-KDHYVQMGSYGIGAMRV 324 D L R + G I + LP + + +DG K + + G G+ Sbjct: 421 QDCL-------GRTWQCGTI---QLDFQLPQNFELEYTDSDGSKKRPILIHRAGFGSFER 470 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + GK W ++P ++ ++ + + R+ +I +L + G V D+ Sbjct: 471 FIGMLTEQYAGKFPTW---LSPLQVKVLPVS---EKHREYSRQIADKLRQAGVRVKVDER 524 Query: 385 GEQIGSQFAVADLLG-FPLQVIVGSKFVSDSKVEIKHR 421 E+IG + A + P +I+G + ++ R Sbjct: 525 DEKIGYKIREARSVDRVPYMLILGEVEEEAGNISVRDR 562 >gi|304410724|ref|ZP_07392342.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS183] gi|307304819|ref|ZP_07584569.1| tRNA synthetase class II (G H P and S) [Shewanella baltica BA175] gi|304351208|gb|EFM15608.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS183] gi|306912221|gb|EFN42645.1| tRNA synthetase class II (G H P and S) [Shewanella baltica BA175] Length = 403 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 2/131 (1%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 + G+ W P G ++ +R R G E++ P +LW SG D + + M Sbjct: 19 QAPGMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMKKELWQTSGHMDMFAENMF 78 Query: 95 RLADR-NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 + N + P +F+ + S+R+LP ++ L R+E G +R+ Sbjct: 79 FGGGKENIDEYVLKPMSCPAHILLFKRGVHSHRDLPLRLFEFGLVHRNESSGSLNGCLRA 138 Query: 153 REFLMKDAYSF 163 R+F DA+ F Sbjct: 139 RQFTQDDAHVF 149 >gi|258544548|ref|ZP_05704782.1| threonine--tRNA ligase [Cardiobacterium hominis ATCC 15826] gi|258520179|gb|EEV89038.1| threonine--tRNA ligase [Cardiobacterium hominis ATCC 15826] Length = 639 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 12/181 (6%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + G E+ P + LW +SG +D +G Sbjct: 256 LQEEAPGMVFWHAKGWVIYREIENYMRGKLRKYGYEEVQGPQILDRSLWEKSGHWDKFGG 315 Query: 92 EMLRLA-DRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M D +D A+ + P H IF ++SYR LP + + + R+E Sbjct: 316 NMFTCCIDEHDYAIKPMNCPGH----IQIFNQGLRSYRELPVRYAEFGICHRNEPSGTLH 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGG 204 G+MR R F+ D + F T + ++ ++H G + + + P +G Sbjct: 372 GLMRVRRFVQDDGHIF-CTRSQIREEIERVCQMVYEVYHDFGFDEVELALSTRPEKRVGS 430 Query: 205 D 205 D Sbjct: 431 D 431 >gi|163735041|ref|ZP_02142478.1| threonyl-tRNA synthetase [Roseobacter litoralis Och 149] gi|161391823|gb|EDQ16155.1| threonyl-tRNA synthetase [Roseobacter litoralis Och 149] Length = 648 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 90/408 (22%), Positives = 150/408 (36%), Gaps = 68/408 (16%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q G E++ P + LW SG +D Y + Sbjct: 260 MQEEAPGQVFWHPNGWSIYTTLQDYMRRKQRAAGYQEVNTPQVVDRKLWEASGHWDKYQE 319 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF +KSYR+LP + R E Sbjct: 320 HMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP--- 201 G+MR R F D + F E + F++YL ++ LG + + + P Sbjct: 380 LHGIMRVRGFTQDDGHIF--CREDQIEAECAAFITYLSSVYQDLGFEKFEIMFATRPEKR 437 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD 261 +G + S + + A L + ++ PY T D Sbjct: 438 VGSEESWDHVEAA------------------------------LENAIKATGHPY--TLD 465 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQM----- 314 + + K A G E F +LP + ATF G DG H M Sbjct: 466 AGEGAFYGPKLDFKLTDAIGRE-WQCGTFQVDPNLPERLDATFIGEDGAKHRPYMLHRAC 524 Query: 315 -GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYAR 371 GS+ R + +IE+S GK W +AP ++ + +I A+D V ++ + Sbjct: 525 LGSF----ERFIGILIENSA-GKLPFW---LAPRQVVVASIITDANDYVM-----QVVDQ 571 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 L G D E+I + + P+ + VG++ V + V ++ Sbjct: 572 LKAAGVRAEADLRNEKINYKVREHSVGKVPVILAVGAREVEEQTVTLR 619 >gi|156742029|ref|YP_001432158.1| prolyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] gi|259511618|sp|A7NKX0|SYP_ROSCS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|156233357|gb|ABU58140.1| prolyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] Length = 480 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 98/438 (22%), Positives = 171/438 (39%), Gaps = 85/438 (19%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 S+++L I+Q+ A++A + +++ G I G W + + D + A Sbjct: 14 SQWYLDIVQQ----ADLADYAEVVK-GCIVFKPTGYALWEAIQRGLDDRIKA-------- 60 Query: 64 TGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRL--ADRNDKAMIY--GPTHEEVMTDIF 118 TG + P L + L E+ + + E+ + A D A Y PT E ++ + Sbjct: 61 TGHVNAYFPLLIPKSFLMKEAEHVEGFAPEVAEVTRAGGEDLAEPYVIRPTSETIIGYFY 120 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++SYR+LP Q R E+R R +R+ EFL ++ ++ T E ++ Sbjct: 121 SKWVRSYRDLPLLINQWANVMRWEMRTR-PFLRTTEFLWQEGHTVHATEEDAERET---- 175 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L I H V AD F KD M P+ Sbjct: 176 ---LLILHE------------------------VYAD------FVEKD-MAIPV------ 195 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 I L S E++ P A S + D R ++ G G ++ Sbjct: 196 ---IRGLKSEKEKF--PGALRSYCIEAMMQD---------GRALQAGTSHNLGQNFARAF 241 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T+ Y S+G+ + R++ A+I + D +G++ P +AP ++ ++ I +D Sbjct: 242 DITYTDQHNTIQYAWTTSWGV-STRLIGALIMTHSDDEGLVIPPRLAPTQVVVVPIYRND 300 Query: 359 ---QVCRDACEKIYARLSKVGCDVFWDDMGEQI--GSQFAVADLLGFPLQVIVGSKFVSD 413 V +A +++ A G F D + + G +F +L G P++V +G K + Sbjct: 301 AERSVVMEAVQRMTAEWK--GLLRFKVDDRDNLTPGFKFNEWELKGVPIRVEIGPKDIEK 358 Query: 414 SKVEIKHRLTGIREDMSL 431 V I R RE S Sbjct: 359 GSVAIARRDQPGREGKSF 376 >gi|291460611|ref|ZP_06600001.1| proline--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] gi|291416802|gb|EFE90521.1| proline--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] Length = 478 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 1/146 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ F D + V S+G R++ A+I D G+ Sbjct: 224 GQALQCGTSHNFGDGFAKAFGVQFLDKDNQRKTVHQTSWGF-TTRMIGALIMVHGDDSGL 282 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 P +AP +I ++ ++ + D + RL K G V DD G +FA ++ Sbjct: 283 KIPPRIAPTQIMIVPVQQQKEGVLDKAFSLRERLIKAGFRVKVDDSDRSPGYKFADCEMR 342 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTG 424 G PL++ +G + + + + R TG Sbjct: 343 GIPLRLEIGPRDIEAGQAVLVRRDTG 368 >gi|149184542|ref|ZP_01862860.1| prolyl-tRNA synthetase [Erythrobacter sp. SD-21] gi|148831862|gb|EDL50295.1| prolyl-tRNA synthetase [Erythrobacter sp. SD-21] Length = 513 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/276 (18%), Positives = 100/276 (36%), Gaps = 64/276 (23%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ D I+S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 118 EEPLVVRPTSETIIGDAMARWIQSWRDLPLKLNQWANVVRWEMRTRM-FLRTSEFLWQEG 176 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ +K +M Y + Sbjct: 177 HTAHADEVEAKEHTLRMLEVY--------------------------------------R 198 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F +D +P E + + VE W+ E + Sbjct: 199 AFADEDLALAVVPGEKPENE---RFPGAVETWSI------------------EAMMQDGK 237 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G Y GT ++ ++ +G + + S+G+ + R+V VI + D G+ Sbjct: 238 ALQAGTSHYLGTNFAKASGIKYQNKEGGETFAHTTSWGV-STRMVGGVIMTHGDDDGLRL 296 Query: 341 PDSVAPFKISLINI---KAHDQVCRDACEKIYARLS 373 P +AP ++ ++ + K D + CE + A L+ Sbjct: 297 PPKIAPQQVVILPMLRDKPEDDALIEYCEALRATLA 332 >gi|304391869|ref|ZP_07373811.1| threonyl-tRNA synthetase [Ahrensia sp. R2A130] gi|303296098|gb|EFL90456.1| threonyl-tRNA synthetase [Ahrensia sp. R2A130] Length = 663 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 9/204 (4%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIR 58 ++ K +L +L+E A+ H+ + R + H + G+ W G K ++ + +R Sbjct: 231 KQLKQYLHMLEE----AQKRDHRKLGREMDLFHFQEEGPGVVFWHAKGWKVFQHLVSYMR 286 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y + M +++ P + IF Sbjct: 287 RRIEEHGYDEVNAPQILDKALWETSGHWGWYRENMFTTVTEDERQFAIKPMNCPGHVQIF 346 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++ ++SYR LP + R E G+MR R F DA+ F TPE + ++ Sbjct: 347 KNGLRSYRELPVKMAEFGNVHRYEPSGALHGLMRVRGFTQDDAHVF-CTPEQLEEECLRI 405 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP 201 L + G I ++ + P Sbjct: 406 NDLILSTYSDFGFGDIVVKLSTRP 429 >gi|256076493|ref|XP_002574546.1| glutamyl-tRNA synthetase cytoplasmic (glutamate--tRNA ligase) (glurs) [Schistosoma mansoni] gi|238659754|emb|CAZ30779.1| glutamyl-tRNA synthetase, cytoplasmic (glutamate--tRNA ligase) (glurs), putative [Schistosoma mansoni] Length = 1306 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 18/173 (10%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFK-GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + R I+ + G +S T+ GK YV S+G+ R + +I D K Sbjct: 1015 NGRAIQGATSHHLGQNFSRMFDVTYDHPVTGKPAYVYQNSWGL-TTRTLGVLIMVHSDDK 1073 Query: 337 GIIWPDSVAPFKISLI--NIKAHDQVCR-----DACEKIYARLSK------VGCDVFWDD 383 G++ P VAP++I ++ I A V A ++ L+K V CD D Sbjct: 1074 GLVLPPRVAPYQIVIVPCGITAKTTVQERETLLSAAHSVFELLNKSNKQFRVHCD---DR 1130 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G +F +L G P+++ +G + V+D KV + R TG R ++ ++ +IN Sbjct: 1131 DNVSPGWKFNHWELKGVPIRLEIGPQEVADRKVCLVLRHTGERVNVPMDSLIN 1183 >gi|189200603|ref|XP_001936638.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983737|gb|EDU49225.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 768 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 6/179 (3%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP GQ + + A +REE G E+ P + ++ LW SG + Y Sbjct: 337 FFHEFSPGSCFFLPHGQIIYNTLQAFLREEYWNRGYQEVGSPNMYNSALWKISGHWQHYA 396 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +M +K + P + IF+ +SYR LP + R+E G+ Sbjct: 397 DDMFTFDVEKEKWAL-KPMNCPGHCLIFKHRERSYRELPIRMADFGILHRNEASGALTGL 455 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--GDL 206 R R F D + F T + + +F ++ + G + M+ + P G GD+ Sbjct: 456 TRVRRFQQDDTHVF-CTQDQITEEISALFDFLRAVYGKFGF-TFKMKLSTRPEGFLGDI 512 >gi|167623946|ref|YP_001674240.1| threonyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] gi|189083622|sp|B0TT20|SYT_SHEHH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|167353968|gb|ABZ76581.1| threonyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] Length = 642 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 85/419 (20%), Positives = 150/419 (35%), Gaps = 48/419 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR++ + E+ P + LW SG +D Y Sbjct: 256 MQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRVLWERSGHWDKYSD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + + + G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVQQEVSACIRMVYDTYATFGFSNIVVKLSTRPEKRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ + + D +P E + I L Sbjct: 432 -DMWDRAEEALKKALKANDIEFEILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + GK W ++P ++ ++NI D + + + G D Sbjct: 521 FLGILIEEYAGKFPAW---LSPVQVVVMNITDKQS---DYVDNVVNLFKEHGIRATKDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E+IG + L P ++VG + + +++V ++ R M LEE ++ S Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMENNEVAVRTREGVDLGKMQLEEFATKLKNQIS 633 >gi|260774298|ref|ZP_05883213.1| threonyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] gi|260611259|gb|EEX36463.1| threonyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] Length = 642 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 82/397 (20%), Positives = 145/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ IR + E+ P + LW SG +D Y Sbjct: 257 MQQEAPGMVFWHHNGWSIFRDLEVFIRHKLTEYDYQEVKGPLMMDRVLWERSGHWDKYAD 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + ++ G ++I ++ + P +G D Sbjct: 376 RVRGFTQDDAHIF-CTEDQIQQEVTSCIKMVYDTYNTFGFENIAVKLSTRPEKRVGSD-- 432 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + S D M I E A Y + L Sbjct: 433 ----EIWDKSEEALKHSLDAMGIAY--------------EIQEGEGAFYGPKIEF---TL 471 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 +D L R + G + ++LP + AT+ G + M I G++ Sbjct: 472 YDCLD-------RAWQCGTV---QLDFNLPSRLGATYVGESNERLVPVMIHRAILGSLER 521 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + G +P +AP + ++NI D +++ +L K G D Sbjct: 522 FIGILIEEYAG---FFPTWLAPEQAVVVNITDKQA---DYAQEVVQKLQKCGIRAKADLR 575 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G + + ++ ++ R Sbjct: 576 NEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTR 612 >gi|260551943|ref|ZP_05825805.1| threonyl-tRNA synthetase [Acinetobacter sp. RUH2624] gi|260405346|gb|EEW98841.1| threonyl-tRNA synthetase [Acinetobacter sp. RUH2624] Length = 640 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 81/415 (19%), Positives = 155/415 (37%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q G E+ P + LW +SG +Y + Sbjct: 255 MQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSESRNYAV-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGKEVADFIQLTLDVYKDFGFEEVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L++ +W + K+ Sbjct: 431 ----ALWDLAE------KSLAD--------------ALDAAGLKWEL-QPGEGAFYGPKI 465 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLPM---SATFKGADGKDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP+ ++ + +D V + +G+ Sbjct: 466 EFSLKDC---------LGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P ++P + ++NI +A E++ A+L + G Sbjct: 517 FERFIGILIEHYAG---FMPPWLSPVQACVMNITDAQA---EASEQVVAKLKENGLRAIS 570 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P +++G + V + V ++ R MS++ I+ Sbjct: 571 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFID 625 >gi|26554256|ref|NP_758190.1| prolyl-tRNA synthetase [Mycoplasma penetrans HF-2] gi|81846191|sp|Q8EUW7|SYP_MYCPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|26454265|dbj|BAC44594.1| prolyl aminoacyl-tRNA synthetase [Mycoplasma penetrans HF-2] Length = 470 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 73/147 (49%), Gaps = 8/147 (5%) Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y GT ++ ++ + + S G+ + R++ A+I S D G++ P +AP + Sbjct: 228 YLGTNFAKSYDLKYQTKNNNYDLMFQTSAGL-STRIIGAIIMSHSDNNGLVLPFKIAPIQ 286 Query: 349 ISLINIKAHDQVCRDACE--KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 +++ ++V +D+ E IY L ++ + + +G Q ++ G P Q+I+ Sbjct: 287 FAIV---TSNEVNKDSDELKAIYKNLFGYKYQTYF--VEKSLGLQLQENEIKGIPFQLIL 341 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEE 433 G K + ++ + I R T ++++S +E Sbjct: 342 GKKEIENNTITIYRRDTREKQNISFKE 368 Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 23/155 (14%) Query: 57 IREEQNRT----GAIEMSVPTL-QSADLWVESGRYDSYGKEMLRLADRNDKAM----IYG 107 I+EE N+ E+ P L ++ E + + E+ +++ +K + + Sbjct: 47 IQEEFNKILVSLNTAEVCFPMLIPYSEFMKEKEHVEGFNPELFKVSHLGEKKLEDELVIR 106 Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLM---------- 157 PT E + F+ +IKSY +LP Q FR E R +R+ EFL Sbjct: 107 PTSEISFCNYFKKNIKSYNDLPCILNQWGSVFRVEKNTR-PFLRTSEFLWQEQHAVFADK 165 Query: 158 KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 K+A+ F +T + Y K YL I +G K+ Sbjct: 166 KEAFDFSIT---MVNEYKKFVNDYLSIAVLMGEKT 197 >gi|114332291|ref|YP_748513.1| threonyl-tRNA synthetase [Nitrosomonas eutropha C91] gi|122313048|sp|Q0ADN4|SYT_NITEC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114309305|gb|ABI60548.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Nitrosomonas eutropha C91] Length = 635 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ + G +E+ P + LW +SG ++++ + Sbjct: 255 MQEEAPGMVYWHPKGWAIWQQIEQYMRQVLAKNGYVEIRTPQVLDISLWEKSGHWENFRE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + + P + +F ++SYR+LP + R+E G+M Sbjct: 315 NMF-ITESESRHYAIKPMNCPGHVQVFNHGLRSYRDLPLRLAEFGSCHRNEASGALHGLM 373 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 374 RVRSFTQDDAHIF 386 >gi|190575251|ref|YP_001973096.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] gi|229558456|sp|B2FN79|SYT_STRMK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|190013173|emb|CAQ46806.1| putative threonyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] Length = 633 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 78/409 (19%), Positives = 145/409 (35%), Gaps = 42/409 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 256 LQEEAPGLVFWHPKGWALWQVVEQYMRKVYRNSGYGEVRCPQILDVSLWKKSGHWDNYQD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 316 NMF-FTESEKRTYAVKPMNCPGHIQVFNQGLHSYRDLPIRYGEFGSCHRNEPSGALHGIL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F T + L ++ G I ++ P +G D + Sbjct: 375 RVRGFTQDDGHVF-CTENQIESEVTAFHQQALAVYQHFGFDEIQIKIALRPESRLGDDAT 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A C ++ + P A Y + H L Sbjct: 434 WDKAEGA-LRSALTACGVEWQELPGEG-------------------AFYGPKIEYH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 471 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFLG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G+ +P +AP ++ + NI D + L++ G V D E+ Sbjct: 524 ILIEHHAGQ---FPAWLAPTQVVVANIT---DAQADYVSGVTKTLAEQGFRVSSDLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 IG + L P +++G + + V ++ R MSL+ I Sbjct: 578 IGYKIREHTLQRVPYLLVIGDREKENGAVAVRTRSGEDLGSMSLQAFIE 626 >gi|39942942|ref|XP_361008.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|58257459|gb|AAW69351.1| threonyl-tRNA synthetase-like protein [Magnaporthe grisea] gi|145009886|gb|EDJ94542.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 812 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H +S G WLP G + + + + IRE E+ P + +ADLW +SG + Y + Sbjct: 346 HDYSPGSAMWLPHGTRIYNTLLSYIREIYWEKNYEEVITPNIYNADLWKQSGHWQFYKDD 405 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + D D + P + +F +S+R LP+ + R+E G+ R Sbjct: 406 MFVIKDEKDTFGL-KPMNCPGHALMFAHRERSHRELPWRVADFGVLHRNEASGALSGLTR 464 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 465 VRRFQQDDAHIF 476 >gi|126172877|ref|YP_001049026.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS155] gi|125996082|gb|ABN60157.1| tRNA synthetase, class II (G, H, P and S) [Shewanella baltica OS155] Length = 403 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 2/131 (1%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 + G+ W P G ++ +R R G E++ P +LW SG D + + M Sbjct: 19 QAPGMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMKKELWQTSGHMDMFAENMF 78 Query: 95 RLADR-NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 + N + P +F+ + S+R+LP ++ L R+E G +R+ Sbjct: 79 FGGGKENIDEYVLKPMSCPAHILLFKRGVHSHRDLPLRLFEFGLVHRNESSGSLNGCLRA 138 Query: 153 REFLMKDAYSF 163 R+F DA+ F Sbjct: 139 RQFTQDDAHVF 149 >gi|315639344|ref|ZP_07894506.1| threonine--tRNA ligase [Campylobacter upsaliensis JV21] gi|315480670|gb|EFU71312.1| threonine--tRNA ligase [Campylobacter upsaliensis JV21] Length = 602 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 94/443 (21%), Positives = 184/443 (41%), Gaps = 43/443 (9%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD ++L L T Q G+ WL G + + ++ + Sbjct: 195 KEYLHIIEEAKKRDHRKLGNELKLFT-FDEQIGGGLPIWLSNGARLRSKLEQMLYKIHRL 253 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L A+ W SG Y +Y KE + + +++ P + I+++ ++ Sbjct: 254 RGYEPVRGPELLKAEAWKISGHYANY-KENMYFTNIDEQEYGIKPMNCVGHIKIYQNEVR 312 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM-FV-S 180 SYR+LP F++ + R E G+ R REF DA+ F + + + + FV S Sbjct: 313 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILDFVAS 372 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++IF I R E IG + E A K+ +D + + Sbjct: 373 LMKIFDFEYEMEISTRPEKA-IGDEAIWEVATKA---------LKEALD----EQGLKY- 417 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I E A Y D+ K+ D+L ++ I+V F ++ L ++ Sbjct: 418 ------GIDEGGGAFYGPKIDI---KITDAL--KRKWQCGTIQVD--FNLPERFELEYTS 464 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + K+ V + +G+ ++ G+ +P +AP ++ ++ I +V Sbjct: 465 S---ENAKERPVMLHRAILGSFERFIGILTEHCAGE---FPFFIAPTQVGIVPI---SEV 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + I L ++G D D E + + A+ P+ +++G + +S+ V ++ Sbjct: 516 HLAYAKGIQRTLLEMGVDSEIYDKNESLSKKIRNAEKQKLPMILVIGDEELSNRAVALRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R ++ +SL+E +N + + Sbjct: 576 RRAKEQKSLSLDEFMNLIKEKIN 598 >gi|256076491|ref|XP_002574545.1| glutamyl-tRNA synthetase cytoplasmic (glutamate--tRNA ligase) (glurs) [Schistosoma mansoni] gi|238659753|emb|CAZ30778.1| glutamyl-tRNA synthetase, cytoplasmic (glutamate--tRNA ligase) (glurs), putative [Schistosoma mansoni] Length = 1346 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 18/173 (10%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFK-GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + R I+ + G +S T+ GK YV S+G+ R + +I D K Sbjct: 1055 NGRAIQGATSHHLGQNFSRMFDVTYDHPVTGKPAYVYQNSWGL-TTRTLGVLIMVHSDDK 1113 Query: 337 GIIWPDSVAPFKISLI--NIKAHDQVCR-----DACEKIYARLSK------VGCDVFWDD 383 G++ P VAP++I ++ I A V A ++ L+K V CD D Sbjct: 1114 GLVLPPRVAPYQIVIVPCGITAKTTVQERETLLSAAHSVFELLNKSNKQFRVHCD---DR 1170 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G +F +L G P+++ +G + V+D KV + R TG R ++ ++ +IN Sbjct: 1171 DNVSPGWKFNHWELKGVPIRLEIGPQEVADRKVCLVLRHTGERVNVPMDSLIN 1223 >gi|253700848|ref|YP_003022037.1| threonyl-tRNA synthetase [Geobacter sp. M21] gi|259516486|sp|C6DYJ5|SYT_GEOSM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|251775698|gb|ACT18279.1| threonyl-tRNA synthetase [Geobacter sp. M21] Length = 636 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 88/404 (21%), Positives = 157/404 (38%), Gaps = 43/404 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+E + G + P + +LW SG Y++Y +E + Sbjct: 263 GLVIWHPKGAMLRTILEDFERKEHLKRGYDIVLGPQILKTELWQRSGHYENY-RENMYFT 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++++ P + I+RS ++SYR+LP ++++ R E G++R R F Sbjct: 322 TVDEQSYGVKPMNCLAHMMIYRSQLRSYRDLPLRYFELGTVHRHERAGVLHGLLRVRGFT 381 Query: 157 MKDAYSFDLTPEGSKHSYNKM--FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 DA+ TP+ + FV+ + G EF + Sbjct: 382 QDDAHIL-CTPDQLDAEIKGVIQFVT--------------------EVMGIFGFEFEMEL 420 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T + S D + + D I E A Y D+ KL D+L + Sbjct: 421 STRPEKSIGSDDAWELATSALLNALKDSGRPYEINEGDGAFYGPKIDI---KLRDAL--D 475 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSH 333 +R I+ F ++ L T+ ADG K V + +GA+ V+ Sbjct: 476 RRWQCATIQCD--FTLPERFDL----TYVDADGEKKRPVMVHRVILGAIERFIGVLIEHF 529 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G +P +AP + +++ + +Q+ + + +L G V D E++G + Sbjct: 530 AGN---FPTWLAPVQATIVTV-TDNQI--PYAQAAFDKLRAAGIRVQKDFRNEKLGFKIR 583 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 A L P ++VG K V + + R E M+ E+ I + Sbjct: 584 EAQLQKIPYMLVVGDKEVESGMLAPRFRDGKNLESMTPEQFITF 627 >gi|296489553|gb|DAA31666.1| threonyl-tRNA synthetase, mitochondrial [Bos taurus] Length = 718 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 98/415 (23%), Positives = 157/415 (37%), Gaps = 65/415 (15%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + + A I+ E R G E+ PTL SA LW SG ++ Y Sbjct: 313 FFHELSPGSCFFLPRGTRVYNALVAFIKAEYTRRGFSEVKTPTLFSAKLWELSGHWEHYR 372 Query: 91 KEMLRLA----DR------------NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 ++M L DR + + P + +F +S+R LP Sbjct: 373 EDMFALQPPGLDRPSSSQSDHSASPHTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLAD 432 Query: 135 IQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 R E G+ R R F DA+ F P+ + ++ LG S Sbjct: 433 FGALHRAEASGSLGGLTRLRCFQQDDAHIF-CAPDQLEAEIRGCLDFLHSVYTILGF-SF 490 Query: 194 PMRAESGPIGGDLSHEFI---VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 M + P G F+ L D E QV + +F P + + D Sbjct: 491 HMALSTRPSG------FLGEPCLWDQAE-QVL-QQALEEFGAPWDISPGDG--------- 533 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SATFKGADGK 308 A Y DVH + D+L R + G I + LP+ +KG G Sbjct: 534 ---AFYGPKIDVH---VRDAL-------GRPHQCGTI---QLDFQLPLRFDLQYKGQLGA 577 Query: 309 -DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACE 366 + V + +G++ + V+ S GK WP ++PF++ +I + ++ R+A + Sbjct: 578 LERPVLIHRAVLGSVERMLGVLAESCGGK---WPLWLSPFQVVVIPVGTEQEEYAREAQQ 634 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + A D D G + + A L + Q +VG + S V I+ R Sbjct: 635 SLRAAGLVGDLDA---DSGLTLSRRIRRAQLAHYNFQFVVGQREQSKRTVNIRTR 686 >gi|269139162|ref|YP_003295863.1| threonyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|267984823|gb|ACY84652.1| threonyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|304559086|gb|ADM41750.1| Threonyl-tRNA synthetase [Edwardsiella tarda FL6-60] Length = 642 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 87/414 (21%), Positives = 151/414 (36%), Gaps = 54/414 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPI---PSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 + D E + + P P E + I Sbjct: 432 ----EIWDRAEEDLAAALQENGIPFEYQPGEGAFYGPKIEFT------------------ 469 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GA 321 L D L R + G + +SLP +SA++ G + + M I G+ Sbjct: 470 --LHDCLD-------RAWQCGTV---QLDFSLPGRLSASYVGENNERVVPVMIHRAILGS 517 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 M ++ G +P +AP + ++NI + E++ +L G Sbjct: 518 MERFIGILTEEFAG---FFPTWLAPVQAVVMNITDSQA---EYVEELSKKLQAAGIRAKS 571 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+IG + L P ++ G K V KV ++ R +S+++VI Sbjct: 572 DLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGVISIDDVI 625 >gi|194206357|ref|XP_001491149.2| PREDICTED: similar to threonyl-tRNA synthetase-like 2 [Equus caballus] Length = 754 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 87/424 (20%), Positives = 163/424 (38%), Gaps = 63/424 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y + Sbjct: 366 FHDLSPGSCFFLPRGAFIYNTLMDFIREEYHQRNFTEVLSPNMYNSKLWEASGHWQHYSE 425 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M D P + +F +S+R +P F + R+EL G+ Sbjct: 426 NMFTF-DIEKDTFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLT 484 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAES--GPIGGD 205 R R F DA+ F T E + ++ G ++ R E+ G IG Sbjct: 485 RVRRFQQDDAHIF-CTVEQIEEEIKGCLQFLQSVYSTFGFSFQLNLSTRPENFLGEIG-- 541 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 L D E Q+ M+F P + D A Y D+ Sbjct: 542 -------LWDEAEKQL--QNSLMEFGKPWKMNPGDG------------AFYGPKIDI--- 577 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 K+ D++ + + ++ F +++L + K D K + V + +G++ + Sbjct: 578 KIKDAIGRYHQCATIQLD----FQLPIRFNLTYVS--KDGDDKKNPVIIHRAILGSVERM 631 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD--- 382 A++ ++ GK WP ++P ++ +I + CEK ++S + F++ Sbjct: 632 IAILSENYGGK---WPFWLSPRQVMVIPVGP-------TCEKYALQVS----NEFFEEGF 677 Query: 383 ------DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D + + A L + ++VG K +++ V ++ R I ++S+ I+ Sbjct: 678 MADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNVRTRDNKIHGEISVTSAID 737 Query: 437 YASH 440 H Sbjct: 738 KLKH 741 >gi|206896471|ref|YP_002247167.1| threonyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] gi|206739088|gb|ACI18166.1| threonyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 632 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 84/422 (19%), Positives = 158/422 (37%), Gaps = 58/422 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+ G + P + LW SG Y + M Sbjct: 252 GLILWHPNGAVIRKEIEDFWRQSHIDNGYQLVYTPHVARTKLWEISGHLSFYKENMFPSM 311 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +++ + P + I+++ +SY+ LP F ++ +R E G++R R F Sbjct: 312 ELENQSYLVKPMNCPFHVQIYKTKTRSYKELPIRFAELGTVYRFERSGVLHGLLRVRGFT 371 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM-------RAESGPIGGDLSHE 209 DA+ F + + + ++ L I+ G + + + + + +G D E Sbjct: 372 QDDAHIFCAREQVEEEVEKVLDMA-LGIYRLFGFEDLRIELSVRDPKNKDKYVGDDDVWE 430 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDF----DDIISLNSIVEQWTAPYAATSDVHNE 265 LA++ + ++D +DF + F DI +++ W P Sbjct: 431 ---LAESALSGALKARD-LDFTVAEGEAKFYGPAIDIKVKDALGRYWQGPTIQVD----- 481 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRV 324 +LP F KY+ G DG +H V + +G++ Sbjct: 482 ---FNLPRR---------------FNMKYT--------GQDGLEHEPVMIHRALLGSLER 515 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKVGCDVFWDD 383 A++ + G +W VAP ++ ++ I Q + E + + +V D D Sbjct: 516 FFALLIEQYSGWFPLW---VAPEQVRILPITEDQMQYAQSVAEGL--KEFRVKLDT---D 567 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G ++G + P ++VGSK V V ++H + G MSL+E + Sbjct: 568 TGSKLGYRIRRGQTEKVPYMLVVGSKEVESGVVSVRHGVKGDLGQMSLDEFKSMIKEEIE 627 Query: 444 NN 445 N Sbjct: 628 NK 629 >gi|77735697|ref|NP_001029542.1| threonyl-tRNA synthetase, cytoplasmic [Bos taurus] gi|110287979|sp|Q3ZBV8|SYTC_BOVIN RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73586669|gb|AAI03083.1| Threonyl-tRNA synthetase [Bos taurus] gi|296475710|gb|DAA17825.1| threonyl-tRNA synthetase [Bos taurus] Length = 723 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 87/417 (20%), Positives = 163/417 (39%), Gaps = 57/417 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LWV SG ++ Y Sbjct: 334 FFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIYNSRLWVTSGHWEHYS 393 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 394 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRVADFGVLHRNELSGALTGL 452 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 453 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSIFGFSFKLNLSTRPEKFLGD-- 508 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + + E Q+ EN SLN E+W A Y D Sbjct: 509 ---IEVWNQAEKQL-------------EN-------SLNDFGEKWELNPGDGAFYGPKID 545 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L TF DG D V + + Sbjct: 546 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TFVSHDGDDKKKPVIIHRAIL 594 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + V Sbjct: 595 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHNAKFMV 648 Query: 380 FWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + ++VG K + V I+ R + + ++ E I Sbjct: 649 DIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTISETI 705 >gi|322368472|ref|ZP_08043041.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320552488|gb|EFW94133.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 640 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G+ L ++ E G E+ P L +LW +SG YD+Y +M L Sbjct: 262 GLPLYHPHGKTILRELSDYAGELNRGAGYDEVETPHLFRTELWKKSGHYDNYVDDMF-LL 320 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D ND+ P + IF H SYR+LP +++ +R E R G+ R F Sbjct: 321 DVNDEEYGLKPMNCPGHATIFDQHSWSYRDLPIRYFENGKVYRKEQRGELSGLSRVWSFT 380 Query: 157 MKDAYSF 163 + D + F Sbjct: 381 IDDGHLF 387 >gi|160876899|ref|YP_001556215.1| tRNA synthetase class II [Shewanella baltica OS195] gi|160862421|gb|ABX50955.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS195] gi|315269103|gb|ADT95956.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS678] Length = 398 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 2/131 (1%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 + G+ W P G ++ +R R G E++ P +LW SG D + + M Sbjct: 19 QAPGMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMKKELWQTSGHMDMFAENMF 78 Query: 95 RLADR-NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 + N + P +F+ + S+R+LP ++ L R+E G +R+ Sbjct: 79 FGGGKENMGEYVLKPMSCPAHILLFKRGVHSHRDLPLRLFEFGLVHRNESSGSLNGCLRA 138 Query: 153 REFLMKDAYSF 163 R+F DA+ F Sbjct: 139 RQFTQDDAHVF 149 >gi|148242044|ref|YP_001227201.1| threonyl-tRNA synthetase [Synechococcus sp. RCC307] gi|147850354|emb|CAK27848.1| Threonyl-tRNA synthetase [Synechococcus sp. RCC307] Length = 609 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 87/393 (22%), Positives = 147/393 (37%), Gaps = 45/393 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + RE G + P + DLW SG D Y + M Sbjct: 226 GLVFWHPRGARMRLLIEDFWREAHFAGGYELLYTPHVADIDLWKTSGHLDFYRESMFGPM 285 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 +++ P + + S ++SY+ LP + ++ +R E RP G+MR R F Sbjct: 286 TVDEREYQLKPMNCPFHVLTYASTLRSYKELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 344 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIV 212 DA+ F L PE K+ I ++ + + P IG D + Sbjct: 345 TQDDAHVFCL-PEQISDEILKILDLTETILSTFDFRNYEINLSTRPEKSIGDDAVWD--- 400 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 LA G T+ K + D+ I F Y D+ K+ D++ Sbjct: 401 LATKGLTEALQRKGW-DYKIDEGGGAF----------------YGPKIDL---KIEDAIG 440 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIES 331 + S ++ FG +Y ADG M I G++ ++ Sbjct: 441 RMWQCSTIQLDFNLPERFGLEYV--------AADGSRQRPIMIHRAIFGSLERFFGIMTE 492 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++ G W +AP +I L+ + D+V A E I + LS G D GE++G Sbjct: 493 NYAGDFPFW---LAPEQIRLLPVT--DEVMGYA-ETIQSELSAAGIRSRIDRSGERLGKL 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + P+ ++G++ + ++ R G Sbjct: 547 IRSGEQQKIPVLAVIGAQEAEQGTLSLRSRRQG 579 >gi|16124719|ref|NP_419283.1| threonyl-tRNA synthetase [Caulobacter crescentus CB15] gi|221233433|ref|YP_002515869.1| threonyl-tRNA synthetase [Caulobacter crescentus NA1000] gi|22654137|sp|Q9AAX8|SYT_CAUCR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783515|sp|B8GZS7|SYT_CAUCN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|13421637|gb|AAK22451.1| threonyl-tRNA synthetase [Caulobacter crescentus CB15] gi|220962605|gb|ACL93961.1| threonyl-tRNA synthetase [Caulobacter crescentus NA1000] Length = 655 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 4/161 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + KG+ W P G + +R + G E+ P + LW +SG + +G Sbjct: 261 IQEEGKGMVFWHPKGWALYRVLEDYMRRRLDAAGYKEVKTPQILDRSLWEKSGHAEKFGH 320 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF KSYR LP + R E G+M Sbjct: 321 AMFMCESAEGEVLAVKPMNCPGHIQIFNVGQKSYRELPLRMAEFGACHRYEPSGAMHGIM 380 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGL 190 R R F DA+ F + ++ S F+ LR +++ LG+ Sbjct: 381 RVRAFTQDDAHIFCREEQVTEESAR--FIELLRSVYNDLGM 419 >gi|168070814|ref|XP_001786949.1| predicted protein [Physcomitrella patens subsp. patens] gi|162660100|gb|EDQ48237.1| predicted protein [Physcomitrella patens subsp. patens] Length = 375 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 3/166 (1%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP G + RE Q + G E+ P + + LW +SG + Sbjct: 38 LELFMFSEEAPGMPFYLPKGMTVRTELEQFSRELQLQEGYQEVRTPLMMNNRLWEQSGHW 97 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 + Y K+ + ++ +D P + IF++ + SYR LP + R E Sbjct: 98 EHY-KDNMYFSEVDDATFALKPMNCPGHMLIFKNTLHSYRELPIRMMEFGQVHRHEFSGA 156 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 G+MR R F DA+ + + PE + N+ R++ G + Sbjct: 157 LNGMMRVRTFCQDDAHLY-VMPEQIEDEINQAISLIGRMYDIFGFE 201 >gi|111115550|ref|YP_710168.1| threonyl-tRNA synthetase [Borrelia afzelii PKo] gi|216263396|ref|ZP_03435391.1| threonyl-tRNA synthetase [Borrelia afzelii ACA-1] gi|122956324|sp|Q0SMD6|SYT_BORAP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|110890824|gb|ABH01992.1| threonyl-tRNA synthetase [Borrelia afzelii PKo] gi|215980240|gb|EEC21061.1| threonyl-tRNA synthetase [Borrelia afzelii ACA-1] Length = 581 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 75/405 (18%), Positives = 153/405 (37%), Gaps = 47/405 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG D Y M Sbjct: 205 GLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKM 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 265 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGIMRARGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ T ++ + ++ + G S+ + P +G D Sbjct: 325 QDDAHII-CTHSQVLDEIKEVLRFAIYMWSKFGFNSLKAYLSTKPDKFVGND-------- 375 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 +D + + F +P E I + A Y D+ K+ DSL Sbjct: 376 SDWEMSLKVLEEALSGFEVPYE------------IDKGGGAFYGPKIDL---KIVDSLER 420 Query: 274 NKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIE 330 ++S + ++LP + T+ DGK+ M +G++ ++ Sbjct: 421 EWQMSTIQFD----------FNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILI 470 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G +W ++P + +I + + D K++ + G + D+ ++ + Sbjct: 471 EHYGGAFPLW---LSPIQAVIIPV---NNAVEDYAIKVFNKFKNEGMRIKLDNTSSRMNA 524 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + P I+G + + K+ I+ R + L+E + Sbjct: 525 KIREYQAKKIPYMFIIGEREAKEEKISIRTRTNEQINGLELDEAL 569 >gi|302845190|ref|XP_002954134.1| hypothetical protein VOLCADRAFT_109913 [Volvox carteri f. nagariensis] gi|300260633|gb|EFJ44851.1| hypothetical protein VOLCADRAFT_109913 [Volvox carteri f. nagariensis] Length = 618 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 8/164 (4%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RGI+ G +S F+ D + YV S+G+ R + +I + D KG Sbjct: 349 TGRGIQGATSHCLGQNFSKMFGIQFEDDDRQKQYVWQNSWGL-TTRSLGVMIMTHADDKG 407 Query: 338 IIWPDSVAPFKISLINIKAHD------QVCRDACEKIYARLSKVGCDVFWDD-MGEQIGS 390 ++ P VAP ++ +I I Q + ++ L K G V D + G Sbjct: 408 LVLPPRVAPKQVVIIPIPKASTTPETVQAMMEKVTELAEALEKAGVRVVTDTRVNYTPGW 467 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 ++ +L G PL++ +G K + +S V + R TG +E + +V Sbjct: 468 KYNHWELKGLPLRMELGPKDMENSVVVLARRDTGAKEAVPWTDV 511 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM F I+S+R+LP Q R E + +RSREFL ++ Sbjct: 230 EKPIAIRPTSETVMYPYFAQWIRSHRDLPLRLNQWTNVVRWEFKYPTPFIRSREFLWQEG 289 Query: 161 YSFDLTPE 168 ++ T E Sbjct: 290 HTAFATQE 297 >gi|13508141|ref|NP_110090.1| prolyl-tRNA synthetase [Mycoplasma pneumoniae M129] gi|2501039|sp|P75382|SYP_MYCPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|1674123|gb|AAB96084.1| putative prolyl-tRNA synthetase [Mycoplasma pneumoniae M129] Length = 483 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 69/333 (20%), Positives = 126/333 (37%), Gaps = 68/333 (20%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 ++ PT E ++++ SY+NLP + Q FR E R +R+ EF ++ + Sbjct: 119 LVLRPTSEIAFCNLWKKQSFSYQNLPVIYNQWTCVFRAEKNTR-PFLRNSEFYWQETH-- 175 Query: 164 DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 GL S + +ES I ++ I++ C Sbjct: 176 -------------------------GLFSDGVNSESAAIAFWKLYQDIIVNQ------LC 204 Query: 224 SKDFMDFPIPSEN-TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 F+ P+E + ++ SI+ A ATS H+ Sbjct: 205 IPAFVGLKSPNERFAGAQNTWTVESIMPDGQALQCATS--HD------------------ 244 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 G ++ P TF+ + S GI + R++ A++ + D G++ P Sbjct: 245 -------LGQTFTKPFGLTFQNQANQQAIPYSFSCGI-STRILGALLLTHSDDFGLVLPW 296 Query: 343 SVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 VAP ++ L K D + +K+ L ++ + + Q+G Q ++ G P Sbjct: 297 KVAPIQVKLYLFDKKGDTKTVELAQKVQTLLEQLAIRFQFIKVENQLGKQLGQGEVNGIP 356 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 Q+IV + V I +RLT ++ S E++ Sbjct: 357 FQLIVD----NPQTVNIFNRLTRVKTAYSFEQL 385 >gi|331092516|ref|ZP_08341338.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] gi|330400737|gb|EGG80340.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] Length = 480 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/158 (20%), Positives = 74/158 (46%), Gaps = 1/158 (0%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ +FG+ ++ + + + H V S+G+ R++ A+I D G+ Sbjct: 225 GKALQAATSHFFGSGFADAFDIKYLDKNNELHSVYETSWGL-TTRMIGAIIMVHGDDSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP + +I I H + + ++ L G V D + G +F+ ++ Sbjct: 284 VLPPRIAPVQTRVIPIAQHKEGVLEKATELMNTLKAAGYAVNMDSSDKSPGWKFSEQEMQ 343 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P ++ +G K + +++V + R T + +SL+E+ Sbjct: 344 GIPTRIEIGPKDIENNQVVVVRRDTREKIVVSLDEITT 381 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 10/139 (7%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG +LP G + + A + + TG + +P L +L E + + E+ Sbjct: 38 KGCMVYLPNGYAIWEKIQADLDKRFKETGVENVYLPMLIPENLLQKEKDHIEGFAPEVAW 97 Query: 96 LADRNDKA----MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + ++ M PT E + D + ++SYR+LP + Q L++ RP Sbjct: 98 VTHGGNEPLQERMCIRPTSETLFCDHWSKTVQSYRDLPKIWNQWCSVLRWEKTTRP---F 154 Query: 150 MRSREFLMKDAYSFDLTPE 168 +RSREFL ++ ++ T E Sbjct: 155 LRSREFLWQEGHTIHATYE 173 >gi|157878081|pdb|1H4T|A Chain A, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed With L-Proline gi|157878082|pdb|1H4T|B Chain B, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed With L-Proline gi|157878083|pdb|1H4T|C Chain C, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed With L-Proline gi|157878084|pdb|1H4T|D Chain D, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed With L-Proline Length = 466 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 5/156 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G ++ F+ D + YV S+G+ + R + A+I + D +G+ Sbjct: 208 GKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGL-SWRFIGAIIMTHGDDRGL 266 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVA 395 + P +AP ++ ++ I + R +A + + L G V DD + G +F Sbjct: 267 VLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEW 326 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 +L G P +V +G K + + + RL G +E + L Sbjct: 327 ELKGVPFRVELGPKDLEGGQAVLASRLGG-KETLPL 361 >gi|55980084|ref|YP_143381.1| prolyl-tRNA synthetase [Thermus thermophilus HB8] gi|81821927|sp|Q5SM28|SYP_THET8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|14719699|pdb|1H4Q|A Chain A, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed With Trnapro(Cgg), Atp And Prolinol gi|14719700|pdb|1H4Q|B Chain B, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed With Trnapro(Cgg), Atp And Prolinol gi|14719702|pdb|1H4S|A Chain A, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed With Trnapro(Cgg) And A Prolyl-Adenylate Analogue gi|14719703|pdb|1H4S|B Chain B, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed With Trnapro(Cgg) And A Prolyl-Adenylate Analogue gi|14719710|pdb|1HC7|A Chain A, Prolyl-Trna Synthetase From Thermus Thermophilus gi|14719711|pdb|1HC7|B Chain B, Prolyl-Trna Synthetase From Thermus Thermophilus gi|14719712|pdb|1HC7|C Chain C, Prolyl-Trna Synthetase From Thermus Thermophilus gi|14719713|pdb|1HC7|D Chain D, Prolyl-Trna Synthetase From Thermus Thermophilus gi|14423353|gb|AAK62359.1|AF384553_1 prolyl-tRNA synthetase [Thermus thermophilus] gi|55771497|dbj|BAD69938.1| prolyl-tRNA synthetase [Thermus thermophilus HB8] Length = 477 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 5/156 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G ++ F+ D + YV S+G+ + R + A+I + D +G+ Sbjct: 221 GKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGL-SWRFIGAIIMTHGDDRGL 279 Query: 339 IWPDSVAPFKISLINIKAHDQVCR--DACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVA 395 + P +AP ++ ++ I + R +A + + L G V DD + G +F Sbjct: 280 VLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEW 339 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 +L G P +V +G K + + + RL G +E + L Sbjct: 340 ELKGVPFRVELGPKDLEGGQAVLASRLGG-KETLPL 374 >gi|304404287|ref|ZP_07385949.1| prolyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304347265|gb|EFM13097.1| prolyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 482 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 6/150 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y GT +++ F + + + S+G+ + R++ A+I D +G+ Sbjct: 225 GRAVQAGTSHYLGTNFAVAFDIKFLDRENQLQFTHTTSWGV-STRLIGALIMVHGDDRGL 283 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAV 394 P VAP + +I I K D V ++++A+L G DD + G +F Sbjct: 284 ALPPKVAPTQAIMIPIGPPKTRD-VVMPRVDELFAQLKAAGVRTRVDDRSDVSPGWKFNE 342 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ G PL++ +G + + + + R++G Sbjct: 343 YEMRGVPLRIEIGPRDCENGQAVLVSRVSG 372 >gi|29840712|ref|NP_829818.1| threonyl-tRNA synthetase [Chlamydophila caviae GPIC] gi|33301681|sp|Q821I3|SYT_CHLCV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|29835062|gb|AAP05696.1| threonyl-tRNA synthetase [Chlamydophila caviae GPIC] Length = 635 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 94/430 (21%), Positives = 162/430 (37%), Gaps = 54/430 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + KL L + + S G+ + P G D + + G ++ P L Sbjct: 236 RDHRVLGAKLDLFSQ--QECSAGMPFFHPRGMIVWDALIGYWQRLHQLAGYKQILTPQLM 293 Query: 76 SADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 + LW SG + +Y M L D D A+ P + +++ + SY+ P + Sbjct: 294 NRSLWETSGHWSNYKANMYTLKIDEEDYAI--KPMNCPGCMLYYKTRLHSYKEFPLRIAE 351 Query: 135 IQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-- 191 I R E+ G+MR R F DA+ F LTPE + + ++ GL+ Sbjct: 352 IGHVHRYEVSGALSGLMRVRAFHQDDAHVF-LTPEQVEEETLNILNLVSELYSTFGLEYH 410 Query: 192 -SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + R E IG D E LA + ++ + + NT F II+ Sbjct: 411 LELSTRPEKDTIGSD---ELWELATSA----------LERALINSNTPF--IINPGD--- 452 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADG 307 A Y D+H K R + G I + ++ L + A G Sbjct: 453 --GAFYGPKIDIH----------VKDAIQRTWQCGTIQLDMFLPERFEL----EYTNAQG 496 Query: 308 -KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 K + + G++ ++ GK +W ++P I LI + Q + Sbjct: 497 EKSTPIMLHRALFGSIERFLGILIEHFKGKFPLW---LSPEHIRLITVADRHQ---PHAK 550 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++ A K+G V DD E + + A + V +G + + ++ + I+ R + Sbjct: 551 ELAAAWQKLGLVVTVDDSNESVSKKIRNAQNMQVNYMVTLGDREIEENTLAIRTRDNRVL 610 Query: 427 EDMSLEEVIN 436 M++E IN Sbjct: 611 NAMTVETFIN 620 >gi|330932301|ref|XP_003303723.1| hypothetical protein PTT_16056 [Pyrenophora teres f. teres 0-1] gi|311320083|gb|EFQ88182.1| hypothetical protein PTT_16056 [Pyrenophora teres f. teres 0-1] Length = 776 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 6/177 (3%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G +LP GQ + + A +REE G E+ P + ++ LW SG + Y + Sbjct: 347 HEFSPGSCFFLPHGQIIYNTLQAFLREEYWNRGYQEVGSPNMYNSALWKISGHWQHYADD 406 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +K + P + IF+ +SYR LP + R+E G+ R Sbjct: 407 MFTFDVEKEKWAL-KPMNCPGHCLIFKHRERSYRELPIRMADFGILHRNEASGALTGLTR 465 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--GDL 206 R F D + F T + + +F ++ + G + M+ + P G GD+ Sbjct: 466 VRRFQQDDTHVF-CTQDQITEEISALFDFLRAVYGKFGF-TFKMKLSTRPEGFLGDI 520 >gi|307328733|ref|ZP_07607905.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] gi|306885682|gb|EFN16696.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] Length = 412 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 88/393 (22%), Positives = 149/393 (37%), Gaps = 50/393 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + IR+ + R G + P L +L+ SG + Y +M Sbjct: 23 GLPYWLPDGATVRHTLEEYIRDAERRAGYRHVYSPVLGKRELYELSGHWSHYSDDMFPPM 82 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + ++ P+ I+RS SYR LP ++ +R EL G+ R R Sbjct: 83 ELGAEQVVLRPSLCPHHAVIYRSRGHSYRELPLRMAELGGMYRSELSGVLGGLTRVRAIQ 142 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE-SGPIGGDLSHEFIVLAD 215 + DA+ F T + R + LG+ R GP G +++ + Sbjct: 143 LNDAHIF-CTLDQVADEAGAALEMIRRAYEALGMTPARYRLSLPGPGG-----KYVAAPE 196 Query: 216 TGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D +D +P E VE A Y DV ++ D Sbjct: 197 MWRRSTALLTDVLDGSGLPYEA------------VEGEAAFYGPKIDV---QVADGAGRE 241 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESS 332 +S ++ F+ ++ L + G DG H V + IG++ R VA +IE Sbjct: 242 STLSTVQVD----FHQPEQFDL----HYIGPDGARHRPVMVHRSIIGSVERAVAHLIE-E 292 Query: 333 HDGKGIIWPDSVAPFKISLINIK----AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 H G W +AP ++ ++ I H + C + R G + + Sbjct: 293 HGGAFPAW---LAPTQLVVLPISEAELPHAEALVRRCVDLGLRAELAGPERG------SL 343 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G++ A L+ P Q +VG++ D +V ++ R Sbjct: 344 GARIREARLV--PYQAVVGAREAGDDRVALRLR 374 >gi|157375257|ref|YP_001473857.1| threonyl-tRNA synthetase [Shewanella sediminis HAW-EB3] gi|189083624|sp|A8FV56|SYT_SHESH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157317631|gb|ABV36729.1| threonyl-tRNA synthetase [Shewanella sediminis HAW-EB3] Length = 642 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 80/397 (20%), Positives = 141/397 (35%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR++ + E+ P + LW SG +D Y Sbjct: 256 MQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRVLWERSGHWDKYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTNSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + + + G K I ++ + P IG D Sbjct: 375 RVRGFTQDDAHVF-CTEDQVQQEVSACIKMVYDTYETFGFKDIVVKLSTRPEKRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + ++ Q + +P E + I L Sbjct: 432 -DMWDRSEEALKQALTANGIAYEILPGEGAFYGPKIEFT--------------------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + Y+LP + AT+ D M I G++ Sbjct: 471 HDCLD-------RAWQCGTV---QLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ + GK W +AP ++ ++NI D +++ + G D Sbjct: 521 FLGILIEEYAGKFPTW---LAPMQVVVMNITDKQS---DYVDEVVNIFKESGIRASKDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++VG + + + +V ++ R Sbjct: 575 NEKIGFKIREHTLRRVPYLLVVGDQEMDNKEVAVRTR 611 >gi|86607055|ref|YP_475818.1| threonyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] gi|86555597|gb|ABD00555.1| threonyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] Length = 603 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 8/166 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ W P G + +++EQ + G + + P + DL+ SG + Y ++M + Sbjct: 223 GLPLWTPKGTTLRWVLEDFLKQEQLKRGYLPVVTPHIARVDLFKISGHWQKYREDMFPMM 282 Query: 97 -----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 A ++ + P + I++S ++SYR+LP + + +R E G+ Sbjct: 283 AESEEARAAEQGFVMKPMNCPFHIQIYKSELRSYRDLPLRYAEFGTVYRYEQSGELGGLT 342 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R R F + DA+ F + P+ + + K+ L +F +L LK R Sbjct: 343 RVRGFTVDDAHLF-VRPDQLEEEFLKVVDLILVVFDKLKLKDFRAR 387 >gi|56475898|ref|YP_157487.1| threonyl-tRNA synthetase [Aromatoleum aromaticum EbN1] gi|73919766|sp|Q5P7X5|SYT_AZOSE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56311941|emb|CAI06586.1| threonyl-tRNA synthetase [Aromatoleum aromaticum EbN1] Length = 638 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 15/175 (8%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H+KG W V +R G E+ P + LW +SG +D Y Sbjct: 261 GMVFWHAKGWTLW--------QQVEQYMRRTILDNGYQEVKTPQIVDRSLWEKSGHWDMY 312 Query: 90 GKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 + M +++ D A+ P + IF +KSYR+LP + R+E Sbjct: 313 SELMFTTQSEKRDYAV--KPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH 370 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP 201 G+MR R F+ DA+ F + + F+ L +++ G I ++ + P Sbjct: 371 GIMRVRNFVQDDAHIF--CADEQVQTEAAAFIELLQKVYADFGFTEILIKLSTRP 423 >gi|22299745|ref|NP_682992.1| threonyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] gi|73919834|sp|Q8DGW0|SYT_THEEB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|22295929|dbj|BAC09754.1| threonyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] Length = 605 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 8/166 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ W P G + +++EQ + G + + P + DL+ SG + Y ++M L Sbjct: 215 GLPLWTPRGTVLRSTLEDFLKKEQLKRGYLPVVTPHIARVDLFKTSGHWQKYKEDMFPLM 274 Query: 97 -----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 A +++ + P + I++S ++SYR+LP + +R E G+ Sbjct: 275 AEDAEAAAHEQGFVLKPMNCPFHIQIYKSELRSYRDLPLRLAEFGTVYRYEQSGELGGLT 334 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R R F + D++ F +TPE + + L +F L L R Sbjct: 335 RVRGFTVDDSHLF-VTPEQLDAEFLNVVDLILTVFRCLRLNKFKAR 379 Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust. Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 6/116 (5%) Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G++ + ++ + G W +AP ++ L+ + R E++ A+L + G V Sbjct: 479 GSLERLIGILIEEYAGDFPFW---LAPEQVRLLPVGDEQ---RPYAERVAAQLRERGVRV 532 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D G+++G Q A+ P+ I+G+K V V I+ R G +LE +I Sbjct: 533 SVDRSGDRLGKQIRNAETQKIPVMGIIGAKEVEHETVSIRTRAAGDVGTFALEHLI 588 >gi|329296183|ref|ZP_08253519.1| threonyl-tRNA synthetase [Plautia stali symbiont] Length = 642 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 83/398 (20%), Positives = 147/398 (36%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWDNYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 VMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQVRDEVNSCIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 + D E D + + N+I ++ A E Sbjct: 432 ----EMWDRAE------------------VDLAEALKENNIPFEYQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKG-ADGKDHYVQMGSYGIGAMR 323 L D L R + G + +SLP + AT+ G + + V + +G+M Sbjct: 470 LHDCLD-------RAWQCGTV---QLDFSLPKRLDATYVGETNDRQTPVMIHRAILGSME 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +P +AP + ++NI + ++ +L G V D Sbjct: 520 RFIGILTEEFAG---FFPSWLAPVQAVVMNITDGQA---EYVSELTKKLQNAGIRVKADL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 574 RNEKIGFKIREHTLRRVPYMLVCGEKEVEAGKVAVRTR 611 >gi|21222189|ref|NP_627968.1| threonyl tRNA synthetase [Streptomyces coelicolor A3(2)] gi|10432482|emb|CAC10316.1| putative threonyl tRNA synthetase [Streptomyces coelicolor A3(2)] Length = 430 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 91/418 (21%), Positives = 163/418 (38%), Gaps = 45/418 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + +RE + R G + P L +L+ SG ++ Y +M Sbjct: 48 GLPYWLPDGAVVRHTLEEYVREAERRAGYRHVYSPVLGKRELYEISGHWEHYRDDMFPPM 107 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM-RSREFL 156 + + ++ P+ ++RS +SYR LP ++ +R E G + R R Sbjct: 108 ELGAEEVVLRPSLCPHHALVYRSRARSYRELPLRIAELGAMYRSEPSGVLGGLSRVRAIH 167 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE-SGPIGGDLSHEFIVLAD 215 + DA+ F TP+ + R LG+++ R GP G +++ + Sbjct: 168 LNDAHIF-CTPDQAAAEARAALGLIRRAHADLGIRAARHRLSLPGPGG-----KYVADPE 221 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 ++ +D +P E VE A Y DV E D+ Sbjct: 222 LWRRATALLEEALDG-LPYEA------------VEGEAAFYGPKIDVQIE---DAAGRES 265 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSH 333 +S I+ FG +Y G DG H V + IG++ R VA +IE +H Sbjct: 266 TLSTVQIDFHQPERFGLRY--------LGPDGARHRPVMVHRSVIGSVERAVAHLIE-AH 316 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV-FWDDMGEQIGSQF 392 G W +AP ++ ++ + R+A + + + +G D +G++ Sbjct: 317 GGAFPAW---LAPVQLVVLPVAG---AQREAAYALVRQATDLGLRAEVADPERGSLGARV 370 Query: 393 AVADLLGFPLQVIVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 A + P Q ++G + D V+++ R +S E+++ + R P L Sbjct: 371 RAARKV--PYQAVIGVREAQDGDLVDVRLRDGRRPGQLSGTELLHRITDRVEARGPEL 426 >gi|85709956|ref|ZP_01041021.1| threonyl-tRNA synthetase [Erythrobacter sp. NAP1] gi|85688666|gb|EAQ28670.1| threonyl-tRNA synthetase [Erythrobacter sp. NAP1] Length = 671 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 100/444 (22%), Positives = 161/444 (36%), Gaps = 91/444 (20%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + + A +R + + G E+ P L W +SG + Y + Sbjct: 265 LQEEAHGSVFWHPKGYRIWRELEAYMRRKMDGGGYREIKTPQLMDVRQWTQSGHWGKYAE 324 Query: 92 EML-------------------RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 M ++AD D M P + +F+ I SYR+LP Sbjct: 325 NMFAVPDIVPDVDDSGEAEASPKVADDAD-WMAIKPMNCPAHVLVFKQGITSYRDLPIRL 383 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 ++ R+E G+MR R+F DA+ F V +R F L Sbjct: 384 GEMGCCHRNEPHGALHGLMRVRQFTQDDAHIF---------CTEDQVVEEVRKFCAL--- 431 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + + D + V + F S++ D+D EQ Sbjct: 432 -------ADSVYRDFGFSYHVKLALRPEKRFGSEE-----------DWDK-------AEQ 466 Query: 252 WTAPYAATSDVHNEKL-FDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MS 299 A + + NE+ ++ LP A +E +G + GT LP + Sbjct: 467 ELRDAVAEAGMDNEEYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLPDRLD 526 Query: 300 ATFKGADGKDHYVQM------GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 AT+ G DG+ H M GSY R + +IE H + P +AP + + Sbjct: 527 ATYVGEDGEKHRPVMLHRAIFGSY----ERFIGILIE--HFAGRL--PSWLAPVQAVVAT 578 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I + D + A+L G V D E+I + L P ++VG + + Sbjct: 579 IVSD---ADDYANEATAKLQAAGIRVESDLRNEKINYKVREHSLAKVPHLLVVGKREAEE 635 Query: 414 SKVEIKHRLTGIRED--MSLEEVI 435 V + R G +E MSL+E I Sbjct: 636 GTVAV--RTLGEKEQRVMSLDEAI 657 >gi|310659541|ref|YP_003937262.1| prolyl-tRNA synthetase 2 [Clostridium sticklandii DSM 519] gi|13633967|sp|Q9L4Q8|SYP_CLOSD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|6899998|emb|CAB71307.1| prolyl tRNA synthetase [Clostridium sticklandii] gi|308826319|emb|CBH22357.1| Prolyl-tRNA synthetase 2 (Proline--tRNA ligase 2) (ProRS 2) [Clostridium sticklandii] Length = 481 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 2/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G ++ TF+G G+ Y S+G + R++ +I D +G+ Sbjct: 226 GKALQSGTSHNLAQHFTKAFDITFQGRTGELEYPHHTSWG-ASTRLIGGIIMVHGDNRGL 284 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW-DDMGEQIGSQFAVADL 397 + P VAP ++ +I I + + D +I L G V DD G +F ++ Sbjct: 285 VLPPRVAPTQVVIIPIAQNKEGVLDKAYEIKKELEAKGIRVTLDDDTNYSPGWKFNQYEM 344 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ +G + + ++ I R T ++ SL+ + Sbjct: 345 KGVPLRLEIGPRDIENNVAMIARRDTLSKDSYSLDNI 381 >gi|149057086|gb|EDM08409.1| threonyl-tRNA synthetase-like 2, isoform CRA_b [Rattus norvegicus] Length = 708 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 88/416 (21%), Positives = 165/416 (39%), Gaps = 59/416 (14%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y Sbjct: 321 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNN 380 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 381 MFTFDIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLTGLTR 439 Query: 152 SREFLMKDAYSFDLTPE------GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 R F DA+ F + + G H ++ ++ F +L L + P Sbjct: 440 VRRFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGFSF-QLNLSTRP----------- 487 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 F+ GET+++ D + + + T F +N A Y D+ Sbjct: 488 --EHFL-----GETEIW---DEAERQLQNSLTGFGKPWKINPGD---GAFYGPKIDI--- 531 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 K+ D++ + + ++ F +++L + K D K+ V + +G++ + Sbjct: 532 KIKDAIGRYHQCATIQLD----FQLPIRFNLTYVS--KDGDDKNRPVIIHRAILGSVERM 585 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG------CDV 379 A++ ++ GK WP ++P ++ +I + ACE ++SK DV Sbjct: 586 IAILSENYGGK---WPLWLSPRQVMIIPVGP-------ACENYALQVSKECFEEGFMADV 635 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD + + A L + ++VG K ++ V ++ R I ++S+ VI Sbjct: 636 DLDDSC-TLNKKIRNAQLAQYNFILVVGEKEKLNNSVNVRTRDNKIHGEISITSVI 690 >gi|149238003|ref|XP_001524878.1| threonyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] gi|146451475|gb|EDK45731.1| threonyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] Length = 754 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 2/137 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + ++ S G WLP G + + + +R E + G E+ P + S LW SG + +Y Sbjct: 358 IFNEVSPGSAMWLPHGTRIYNTLVDTLRYEYRKRGYEEVITPNMYSTKLWETSGHWQNYK 417 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F+S +SYR LP+ + R+E G+ Sbjct: 418 ENMFSF-EVEKETFGLKPMNCPGHCVLFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 476 Query: 150 MRSREFLMKDAYSFDLT 166 R R F DA+ F T Sbjct: 477 TRVRRFQQDDAHIFCTT 493 >gi|33866012|ref|NP_897571.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8102] gi|73919836|sp|Q7U662|SYT_SYNPX RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33638987|emb|CAE07993.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8102] Length = 611 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 82/393 (20%), Positives = 149/393 (37%), Gaps = 45/393 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ G + P + LW SG D Y + M Sbjct: 229 GLVFWHPRGARMRLLIEEFWRQAHFEGGYELLYTPHVADISLWKTSGHLDFYAESMFGPM 288 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 + +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 289 EVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 347 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIV 212 DA+ F L PE K+ RI + + + P IG D + Sbjct: 348 TQDDAHVFCL-PEQISDEILKILDLTERILSTFDFNTYEINLSTRPEKSIGDDAVWD--- 403 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 LA G + K + I E A Y D+ K+ D++ Sbjct: 404 LATKGLIEALERKGWK-----------------YKIDEGGGAFYGPKIDL---KIEDAIG 443 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIES 331 + S ++ F ++ L + ADG M I G++ ++ Sbjct: 444 RMWQCSTIQLD----FNLPERFKL----DYVAADGSKQRPIMIHRAIFGSLERFFGIMTE 495 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++ G W +AP ++ L+ + D+V + E + +L++ G D G+++G Sbjct: 496 NYAGDYPFW---LAPEQVRLLPVT--DEV-QPYAESLLDQLTQAGVRATIDRSGDRLGKL 549 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + P+ ++G+K + V ++ R G Sbjct: 550 IRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDG 582 >gi|253583464|ref|ZP_04860662.1| threonine-tRNA ligase [Fusobacterium varium ATCC 27725] gi|251834036|gb|EES62599.1| threonine-tRNA ligase [Fusobacterium varium ATCC 27725] Length = 637 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 99/459 (21%), Positives = 185/459 (40%), Gaps = 68/459 (14%) Query: 3 RSKYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 + K +L +L+E AE H+ + L + ++ G +LP G + + + R Sbjct: 226 KLKAYLTLLEE----AERRDHRKLGKELDLFFVSEYGPGFPIFLPKGMVIRNTLIDLWRR 281 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E G E++ P + + +LW SG + +Y +E + + +D P + ++ Sbjct: 282 EHTLAGYQEITTPIMLNKELWEISGHWFNY-RENMYTSTIDDTEFAIKPMNCPGGILAYK 340 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-------GSK 171 + SY++ P ++ R E G+MR R F DA+ F +TP+ G Sbjct: 341 YQLHSYKDFPIRCGELGTVHRHEFSGALHGLMRVRSFTQDDAHIF-MTPDQIEEEIIGVV 399 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 +K + + + L + P +A IG + + + E + + D + P Sbjct: 400 ELIDKFYSKLFGFEYHIELSTKPEKA----IGSN------EIWEKAEAALAGALDKIGKP 449 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 D A Y D K+ D++ R + G I Sbjct: 450 YKLNPGD--------------GAFYGPKLDF---KIKDAI-------GRTWQCGTI---Q 482 Query: 292 TKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 ++LP ++ G DG+ H V + G++ ++ G +W +AP + Sbjct: 483 LDFNLPERFDISYIGEDGEKHRPVMIHRVVYGSIERFIGILIEHFAGAFPLW---LAPTQ 539 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVG 407 + ++ I +D+V A E I+ L + G DD E IG + A+ P+Q+I+G Sbjct: 540 VKILTI--NDEVVPYAKE-IFKALQERGIRAEIDDRAESIGYKIREANGKYKIPVQLILG 596 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEE----VINYASHRF 442 V + +V I+ + +E M L+E +++ A RF Sbjct: 597 KNEVENREVNIRKFGSQQQESMKLDEFLDIIVDEAKIRF 635 >gi|222640294|gb|EEE68426.1| hypothetical protein OsJ_26793 [Oryza sativa Japonica Group] Length = 701 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 89/441 (20%), Positives = 178/441 (40%), Gaps = 47/441 (10%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIR 58 +R K + +L+E A+ H+L+ +T HQ S G +LP G + + +R Sbjct: 292 KRLKEYKHLLEE----AKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLR 347 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 ++ G E+ P + + LW SG +Y KE + + + + P + +F Sbjct: 348 QQYRDRGYQEVLSPNIYNMQLWETSGHAANY-KENMFVFEIEKQEFGLKPMNCPGHCLMF 406 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP + R+EL G+ R R F DA+ F + + Sbjct: 407 EHRVRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVL 466 Query: 178 -FVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 F++Y ++ G K + + GD I + E Q+ ++ +F P + Sbjct: 467 DFINY--VYEIFGFKYELELSTRPEKYLGD-----IETWNKAEQQL--TEALNEFGKPWQ 517 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + D A Y D+ +FD+L + + ++ F YS Sbjct: 518 INEGDG------------AFYGPKIDI---GVFDALKRKFQCATLQLDFQLPLRFKLTYS 562 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 A + V + +G++ + A++ ++GK WP ++P + + +I Sbjct: 563 AEDEAKL------ERPVMIHRAILGSVERMFAILLEHYNGK---WPLWLSPRQAIVCSIS 613 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 ++ + +++ AR+ + G V D+ I + A L F ++VG++ + Sbjct: 614 SNSV---EYAKQVRARIHEAGFHVAIDETDRTIQKKVREAQLAQFNYILVVGAQEAETGQ 670 Query: 416 VEIKHRLTGIREDMSLEEVIN 436 V ++ R +S++++I Sbjct: 671 VSVRVRDKAELATVSIDDIIT 691 >gi|258644607|dbj|BAI39857.1| putative threonyl-tRNA synthetase [Oryza sativa Indica Group] Length = 749 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 89/441 (20%), Positives = 178/441 (40%), Gaps = 47/441 (10%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIR 58 +R K + +L+E A+ H+L+ +T HQ S G +LP G + + +R Sbjct: 340 KRLKEYKHLLEE----AKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLR 395 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 ++ G E+ P + + LW SG +Y KE + + + + P + +F Sbjct: 396 QQYRDRGYQEVLSPNIYNMQLWETSGHAANY-KENMFVFEIEKQEFGLKPMNCPGHCLMF 454 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP + R+EL G+ R R F DA+ F + + Sbjct: 455 EHRVRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVL 514 Query: 178 -FVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 F++Y ++ G K + + GD I + E Q+ ++ +F P + Sbjct: 515 DFINY--VYEIFGFKYELELSTRPEKYLGD-----IETWNKAEQQL--TEALNEFGKPWQ 565 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + D A Y D+ +FD+L + + ++ F YS Sbjct: 566 INEGDG------------AFYGPKIDI---GVFDALKRKFQCATLQLDFQLPLRFKLTYS 610 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 A + V + +G++ + A++ ++GK WP ++P + + +I Sbjct: 611 AEDEAKL------ERPVMIHRAILGSVERMFAILLEHYNGK---WPLWLSPRQAIVCSIS 661 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 ++ + +++ AR+ + G V D+ I + A L F ++VG++ + Sbjct: 662 SNSV---EYAKQVRARIHEAGFHVAIDETDRTIQKKVREAQLAQFNYILVVGAQEAETGQ 718 Query: 416 VEIKHRLTGIREDMSLEEVIN 436 V ++ R +S++++I Sbjct: 719 VSVRVRDKAELATVSIDDIIT 739 >gi|156120539|ref|NP_001095415.1| threonyl-tRNA synthetase, mitochondrial [Bos taurus] gi|152941102|gb|ABS44988.1| threonyl-tRNA synthetase-like 1 [Bos taurus] Length = 718 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 98/414 (23%), Positives = 157/414 (37%), Gaps = 65/414 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + + A I+ E R G E+ PTL SA LW SG ++ Y + Sbjct: 314 FHELSPGSCFFLPRGTRVYNALVAFIKAEYTRRGFSEVKTPTLFSAKLWELSGHWEHYRE 373 Query: 92 EMLRLA----DR------------NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 +M L DR + + P + +F +S+R LP Sbjct: 374 DMFALQPPGLDRPSSSQSDHSASPHTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADF 433 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 R E G+ R R F DA+ F P+ + ++ LG S Sbjct: 434 GALHRAEASGSLGGLTRLRCFQQDDAHIF-CAPDQLEAEIRGCLDFLHSVYTILGF-SFH 491 Query: 195 MRAESGPIGGDLSHEFI---VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 M + P G F+ L D E QV + +F P + + D Sbjct: 492 MALSTRPSG------FLGEPCLWDQAE-QVL-QQALEEFGAPWDISPGDG---------- 533 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SATFKGADGK- 308 A Y DVH + D+L R + G I + LP+ +KG G Sbjct: 534 --AFYGPKIDVH---VRDAL-------GRPHQCGTI---QLDFQLPLRFDLQYKGQLGAL 578 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 + V + +G++ + V+ S GK WP ++PF++ +I + ++ R+A + Sbjct: 579 ERPVLIHRAVLGSVERMLGVLAESCGGK---WPLWLSPFQVVVIPVGTEQEEYAREAQQS 635 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + A D D G + + A L + Q +VG + S V I+ R Sbjct: 636 LRAAGLVGDLDA---DSGLTLSRRIRRAQLAHYNFQFVVGQREQSKRTVNIRTR 686 >gi|154151503|ref|YP_001405121.1| prolyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8] gi|166980134|sp|A7I9R7|SYP_METB6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|154000055|gb|ABS56478.1| prolyl-tRNA synthetase [Methanoregula boonei 6A8] Length = 478 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 5/141 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + + +++G + + G +S + ++ +G+ YGI + R +AA+I D KG Sbjct: 221 NGKTLQIGTVHHLGNHFSRTFNIQYEDKNGEQKEAYQTCYGI-SERCIAALISLHGDDKG 279 Query: 338 IIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 +I P +VA F++ ++ I K H+ V A K+ L G V D + G+++ Sbjct: 280 LILPPTVATFQVVIVPITIGKRHEDVLA-AAGKLKNDLENAGLRVTLDTRDLRPGAKYYW 338 Query: 395 ADLLGFPLQVIVGSKFVSDSK 415 ++ G PL++ +G + + K Sbjct: 339 WEIRGVPLRLELGPRDLDSGK 359 >gi|332220155|ref|XP_003259223.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 2 [Nomascus leucogenys] Length = 588 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 92/397 (23%), Positives = 148/397 (37%), Gaps = 69/397 (17%) Query: 51 DNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL----ADRNDKA--- 103 D + + + E R G E+ PTL S LW +SG ++ Y ++M + +DR + Sbjct: 203 DQLRQLFKAEYARRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSD 262 Query: 104 ---------MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + P + +F +S+R LP R E G+ R R Sbjct: 263 DSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGSLRGLTRLR 322 Query: 154 EFLMKDAYSFDLTPE-----GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 F DA+ F T + S + + + L RL L + P SG +G Sbjct: 323 CFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLALSTRP----SGFLGDP--- 375 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 C D + + +F + LNS A Y DVH L Sbjct: 376 --------------CLWDQAEQVLKQALKEFGEPWDLNSGD---GAFYGPKIDVH---LH 415 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPM--SATFKGADGK-DHYVQMGSYGIGAMRVV 325 D+L R + G I + LP+ +KG G + V + +G+M + Sbjct: 416 DAL-------GRPHQCGTI---QLDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSMERL 465 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDM 384 V+ S GK WP ++PF++ +I + ++ R+A + + A D D Sbjct: 466 LGVLAESCGGK---WPLWLSPFQVVVIPVGTEQEEYAREAQQSLQAAGLVSDLDA---DS 519 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G + + A L + Q +VG K S V I+ R Sbjct: 520 GLTLSRRIRQAQLAHYNFQFVVGQKEQSKRTVNIRTR 556 >gi|309366994|emb|CAP20463.2| CBR-PARS-2 protein [Caenorhabditis briggsae AF16] Length = 265 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 40/219 (18%) Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 P++A+SG GG +SHE+ V + E DF+D+ + ++ T Sbjct: 14 PVQADSGIHGGHISHEYHVRSSLEE-------DFVDY-----------CTQCGTFSKEET 55 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +K+ +E+ H F+ GTKYS + A F+ GK Y Sbjct: 56 PKMCSRCSASPQKI------------ASVEIAHTFHLGTKYSEALGAKFQ---GKPFY-- 98 Query: 314 MGSYGIGAMRVVAAVIE-SSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 M +GIG R++ A I+ S K + P +++PF +I K+ V + +R Sbjct: 99 MCCFGIGVSRLLPATIDLLSVSDKALRLPRAISPFDAVIIVKKSLMSNVIVEMTSSSASR 158 Query: 372 LSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSK 409 K G + DD E G + A+ LG P +++ ++ Sbjct: 159 YLKGG--ILLDDRIEMSPGKRIHEANRLGIPFIIVLANE 195 >gi|198284332|ref|YP_002220653.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666034|ref|YP_002426993.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|259516307|sp|B7J7T0|SYT_ACIF2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|259516338|sp|B5EN57|SYT_ACIF5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|198248853|gb|ACH84446.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518247|gb|ACK78833.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 644 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 76/388 (19%), Positives = 142/388 (36%), Gaps = 41/388 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P+G + + +E G + P + LW SG D Y + M Sbjct: 262 GLVFWHPMGSRVRRVIEDFWKEAHVEAGYDLLYTPHIAHEQLWYTSGHKDFYSESMFDPM 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +A P + I++ + SYR+LP + ++ +R E+ G+MR R F Sbjct: 322 QDEGQAYQLKPMNCPFHILIYKDKLHSYRDLPIRWAELGTVYRHEMSGALHGLMRVRGFT 381 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F P+ + + V +I G + + P G + + I A T Sbjct: 382 QDDAHVF-CRPDQIEAEIGAVLVLVRKILGTFGFDQYEINLSTRP-GHSVGSDEIWDAAT 439 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + + +++ + + F Y D+ K+ D++ + Sbjct: 440 QALRNALERAGLEYQVDAGGGAF----------------YGPKIDL---KIQDAIGRKWQ 480 Query: 277 VSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 S ++ ++LP + + DG M I G++ V+ + Sbjct: 481 CSTVQLD----------FNLPERFAMEYVAEDGARKVPIMVHRAIFGSIERFFGVLIEHY 530 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 +GK +W +AP + ++ I H + E + L K G D E+IG + Sbjct: 531 EGKFPVW---LAPVQAVVLPISEH---YSEYAESVSDVLVKRGIRAETDLRNEKIGYKIR 584 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L P ++VG + V ++ R Sbjct: 585 AHTLRRVPYLLVVGEREKEAGTVAVRDR 612 >gi|330834227|ref|YP_004408955.1| prolyl-tRNA synthetase [Metallosphaera cuprina Ar-4] gi|329566366|gb|AEB94471.1| prolyl-tRNA synthetase [Metallosphaera cuprina Ar-4] Length = 480 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 6/160 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV-ESGRYDSYGKEMLR 95 KG W+P G K NV ++IR+ + TG E+ P L +L ES + KE+ Sbjct: 34 KGAGVWMPYGFKIRHNVISLIRKLLDETGHEEILFPLLIPEELLKKESEHIRGFEKEVFW 93 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + ++ + PT E +T + I+ Y LP FYQI FR E + ++R Sbjct: 94 VTQGGEEKLETRFALRPTSEVAITLMESLWIRGYSQLPRKFYQIVSVFRYETKATRPLIR 153 Query: 152 SREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 RE K+A++ T E + + Y + F LG+ Sbjct: 154 VRELTTFKEAHTIHETYEDAAKQVKEAVEIYSKFFDILGI 193 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + G ++ M + ADG Y SYGI + RV+A VI + D G Sbjct: 222 GRALQIGTAHHLGQHFTKAMDYKIQRADGTLTYPHQTSYGI-SDRVIATVISINGDDHGP 280 Query: 339 IWPDSVAPFKISLINI--KAHDQVCR--DACEKIYARLSKVGCDVFWDDMGEQI-GSQFA 393 + +AP + +I I K+ + + E++ + L+ G D ++ G +F Sbjct: 281 VLSPVIAPIEAVIIPIPGKSEEDTKKVFSYAEEVRSTLASNGIRAVMDSSEDKTPGEKFY 340 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + +L G P++V G + ++ V +K R T Sbjct: 341 IWELKGVPIRVETGVREMNSGSVYLKRRDT 370 >gi|207344345|gb|EDZ71519.1| YIL078Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 689 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 78/416 (18%), Positives = 160/416 (38%), Gaps = 50/416 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + ++ S G WLP G + + + ++R E + G E+ P + ++ LW SG + +Y Sbjct: 296 LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYK 355 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F+S +SYR LP+ + R+E G+ Sbjct: 356 ENMFTF-EVEKETFGLKPMNCPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 414 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDL 206 R R F DA+ F T + + +F I+ G + M + P +G Sbjct: 415 TRVRRFQQDDAHIF-CTHDQIESEIENIFNFLQYIYGVFGFE-FKMELSTRPEKYVGK-- 470 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY---AATSDVH 263 I D E++ L S +++W + A + Sbjct: 471 ----IETWDAAESK------------------------LESALKKWGGNWEINAGDGAFY 502 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 K+ + + R + + F ++ L + + ++ + V + +G++ Sbjct: 503 GPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESYERPVMIHRAILGSVE 562 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + A++ GK WP ++P ++ ++ + Q E + +L G D Sbjct: 563 RMTAILTEHFAGK---WPFWLSPRQVLVVPVGVKYQ---GYAEDVRNKLHDAGFYADVDL 616 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR----LTGIREDMSLEEVI 435 G + + +L + IVG + +++ V I++R G +S+EEV+ Sbjct: 617 TGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKNATVSVEEVL 672 >gi|150865919|ref|XP_001385328.2| threonyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054] gi|149387175|gb|ABN67299.2| threonyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054] Length = 730 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 2/137 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 ++ S G WLP G + + + IR+E G E+ P + + LW SG + +Y Sbjct: 333 FFNEMSPGSAFWLPHGTRIYNALVQFIRDEYQVRGFDEVITPNMFNHKLWETSGHWGNYK 392 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M D + P + IF+S +SYR LP+ + R+E G+ Sbjct: 393 ENMFTF-DVEKETFGLKPMNCPGHCVIFKSRERSYRELPWRVADFGVLHRNEFSGALSGL 451 Query: 150 MRSREFLMKDAYSFDLT 166 R R F DA+ F T Sbjct: 452 TRVRRFQQDDAHIFCTT 468 >gi|326538797|gb|ADZ87012.1| threonyl-tRNA synthetase [Brucella melitensis M5-90] Length = 661 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 238 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 293 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 294 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 353 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 354 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLQI 412 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 413 NDHILSVYKDFGFEEITIKLSTRPEKRVGSD 443 >gi|320159528|ref|YP_004172752.1| threonyl-tRNA synthetase [Anaerolinea thermophila UNI-1] gi|319993381|dbj|BAJ62152.1| threonyl-tRNA synthetase [Anaerolinea thermophila UNI-1] Length = 623 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 10/164 (6%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G ++ + + +E + + G + P L DL++ SG Y + M Sbjct: 241 GLPLWTPRGGAIIEEIEKLAKEMEFKYGYERVRTPHLAKEDLYLRSGHLPYYAESMYPPM 300 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFL 156 + P + + IF S +SYR LP + +R E FG+MR R Sbjct: 301 ELEGVRYYVKPMNCPMHHKIFASKPRSYRELPVRLAEYGTCYRYEKSGELFGLMRVRSMQ 360 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVS----YLRIFHRLGLKSIPMR 196 M D++ + S+ + + FV YL F G++ MR Sbjct: 361 MNDSHIY-----CSEEQFEQEFVGVIHLYLEYFRLFGIQDYLMR 399 >gi|73981323|ref|XP_860781.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 5 [Canis familiaris] Length = 636 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 96/394 (24%), Positives = 156/394 (39%), Gaps = 73/394 (18%) Query: 56 IIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL----ADR------------ 99 ++ E R G E+ PTL SA LW SG ++ Y ++M L +DR Sbjct: 256 LLTAEYTRRGFSEVKTPTLFSAKLWELSGHWEHYQEDMFVLQPPGSDRLASSLSVCSTSH 315 Query: 100 NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFG-VMRSREFLMK 158 + + P + +F +S+R LP + R E G + R R F Sbjct: 316 STDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRAEASGSLGGLTRLRCFQQD 375 Query: 159 DAYSFDLTPEGSKHSYNKMFVSYLRIFH-------RLGLKSIPMRAESGPIGGDLSHEFI 211 DA+ F P+ + + +LR + RL L + P SG +G Sbjct: 376 DAHIF-CAPDQLEEEIQGC-LDFLRSVYAVLGFSFRLALSTRP----SGFLGES------ 423 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 L D E QV + +F P + D A Y DVH L D+L Sbjct: 424 CLWDQAE-QVL-QRALEEFGEPWDLKPGDG------------AFYGPKIDVH---LHDAL 466 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPM--SATFKGADGK-DHYVQMGSYGIGAMRVVAAV 328 R + G I + LP+ +KG G + V + +G++ + V Sbjct: 467 -------GRPHQCGTI---QLDFQLPLRFDLQYKGQAGVLERPVLIHRAVLGSVERMLGV 516 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 + S+ GK WP ++PF++ +I + A ++ R+A +++ A + + CD+ D G Sbjct: 517 LAESYGGK---WPLWLSPFQVVVIPVGAEQEEYAREAQQRLQA--AGLVCDLD-ADSGLT 570 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + A L + Q +VG K S V I+ R Sbjct: 571 LSRRVRRAQLAHYNFQFVVGQKEQSKKTVNIRTR 604 >gi|332297469|ref|YP_004439391.1| threonyl-tRNA synthetase [Treponema brennaborense DSM 12168] gi|332180572|gb|AEE16260.1| threonyl-tRNA synthetase [Treponema brennaborense DSM 12168] Length = 583 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + S G W P G + +R + G +E+ P + LW SG + Y K Sbjct: 196 IDEDSPGQIFWHPNGWTIYRILEDYVRTKIKADGYVEVKTPFVMPQSLWERSGHWAKY-K 254 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + +IF+ I+SY++LP + R+E G+M Sbjct: 255 ENMFITESEKRIFALKPMNCPGHIEIFKQRIRSYKDLPLRMAEFGSCTRNEASGALHGIM 314 Query: 151 RSREFLMKDAYSF 163 R R F+ DA+ F Sbjct: 315 RVRGFVQDDAHIF 327 >gi|326409092|gb|ADZ66157.1| threonyl-tRNA synthetase [Brucella melitensis M28] Length = 660 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 237 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 292 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 293 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 352 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 353 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLQI 411 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 412 NDHILSVYKDFGFEEITIKLSTRPEKRVGSD 442 >gi|148508028|gb|ABQ75826.1| threonine--tRNA ligase [uncultured haloarchaeon] Length = 643 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 3/156 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G+K L+ +++ G + P L +LW SG Y++Y +M L Sbjct: 262 GLPLYHPNGKKILNELSSYAESLNVDAGYEPVETPHLFKTELWKVSGHYENYVDDMF-LL 320 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D +D P + IF SYR+LP +Y+ +R E R G+ R F Sbjct: 321 DVSDDEYGLKPMNCPGHATIFNQQSWSYRDLPVRYYEDGKVYRKEQRGELSGLSRVWAFT 380 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + D + F TPE + ++ S + + GL + Sbjct: 381 IDDGHLF-CTPEQIEQEVTQVIESIQEVLNTFGLDA 415 >gi|148675292|gb|EDL07239.1| threonyl-tRNA synthetase-like 2, isoform CRA_b [Mus musculus] Length = 559 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 88/418 (21%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y Sbjct: 170 FFHDLSPGSCFFLPRGAFIYNALMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYS 229 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D P + +F +S+R +P F + R+EL G+ Sbjct: 230 NNMFTF-DVEKDTFALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLSGL 288 Query: 150 MRSREFLMKDAYSFDLTPE------GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 R R F DA+ F + + G H ++ ++ F +L L + P Sbjct: 289 TRVRRFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGFSF-QLNLSTRPEH-----FL 342 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 G+ I + D E Q+ ++F P + D A Y D+ Sbjct: 343 GE-----IEIWDEAERQL--QNSLVEFGKPWKINPGDG------------AFYGPKIDI- 382 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 K+ D++ + + ++ F +++L + K D K+ V + +G++ Sbjct: 383 --KIKDAIGRYHQCATIQLD----FQLPIRFNLTYVS--KDGDDKNRPVIIHRAILGSVE 434 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK------VGC 377 + A++ ++ GK WP ++P ++ +I + ACE ++SK Sbjct: 435 RMIAILSENYGGK---WPLWLSPRQVMVIPVGP-------ACENYALQVSKECFEEGFMA 484 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DV DD + + A L + ++VG K ++ V ++ R I ++S+ VI Sbjct: 485 DVDLDDSC-TLNKKIRNAQLAQYNFILVVGEKEKINNAVNVRTRDNKIHGEISIASVI 541 >gi|70733467|ref|YP_263242.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] gi|68347766|gb|AAY95372.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] Length = 629 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/206 (23%), Positives = 76/206 (36%), Gaps = 11/206 (5%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 Y L + Q RD KL + + H + G W G + +R Q + Sbjct: 231 YLLRLEQAQQRD----HRKLGQQLDLFHFDDCAPGSVFWHAKGWTLFQELIGYMRRRQEQ 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E++ P + LW SG + +Y M ++ + P + IF K Sbjct: 287 AGYQEVNTPDVMDRGLWETSGHWQNYRDHMFTTTTQDQRTFALKPMNCPGAVAIFGHGRK 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R E G++R R F DA+ F TP+ + Sbjct: 347 SYRDLPLRIAEFGKVHRYEPSGALHGLLRVRHFTQDDAHIF-CTPQQMQSECAATIALVF 405 Query: 183 RIFHRLGLKSIPMRAESGP---IGGD 205 I+ G + ++ + P IG D Sbjct: 406 DIYKEFGFDQVAVKLSTRPDHRIGSD 431 >gi|297624797|ref|YP_003706231.1| prolyl-tRNA synthetase [Truepera radiovictrix DSM 17093] gi|297165977|gb|ADI15688.1| prolyl-tRNA synthetase [Truepera radiovictrix DSM 17093] Length = 484 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 7/159 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G ++ + TF + + +V S+G+ + R + A+I + D KG+ Sbjct: 223 GKALQAGTSHYMGDNFARAFNITFNDVNNQQAFVHTTSWGL-SWRFIGALIMTHGDDKGL 281 Query: 339 IWPDSVAPFKISLINI-----KAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQF 392 I P +AP ++ ++ I A K++A L G V DD G G +F Sbjct: 282 ILPPPLAPHQVVVVPIYRADDDAARAAVLAEVGKLHAALKDAGVRVKVDDRQGMSPGWKF 341 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 + G PL++ +G K + + RL+G + + L Sbjct: 342 NEWEQKGVPLRLELGPKDLEAGAALLADRLSGEKRPVKL 380 Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 2/94 (2%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ + + I+SYR+LP + Q R ELR R +R+ EFL ++ ++ T Sbjct: 112 PTSETIIGEAYSKWIQSYRDLPLLYNQWCNVLRWELRTR-PFLRTTEFLWQEGHTAHATA 170 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 E + +M Y R G + R E P Sbjct: 171 EEAMAETRQMLEIYAEFAERYGALPV-FRGEKTP 203 >gi|295093898|emb|CBK82989.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Coprococcus sp. ART55/1] Length = 587 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 79/405 (19%), Positives = 150/405 (37%), Gaps = 60/405 (14%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ +LP G + I+ ++ + G + + P + + +L+ SG +D Y M Sbjct: 201 GRGLPMFLPKGYTVWQELENYIKRKERKLGYLHVMTPCVGTVNLYKTSGHWDHYKDNMFP 260 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + ++ + P + I+ + + SY++LP +I FR E G+ R R Sbjct: 261 AMEMEGESFVLRPMNCPHHMMIYANKMHSYKDLPIRIAEIAHDFRFEASGTLKGIERGRH 320 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F D++ F +TP+ + + G + F Sbjct: 321 FCQNDSHIF-VTPDQIEEEF----------------------------AGVVKLIFDTYK 351 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D G T C D P + + D E W A V ++ D E Sbjct: 352 DFGITDYRCVLSLRD---PEDKVKYHDDD------EMWNKAENALRKVLDDIGIDYTEEI 402 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLPMSATFKGADG---KDHYVQMGSYGIG 320 + G + VG+ + T + LP K D K V + +G Sbjct: 403 GEAAFYGPKLDVNVKPAVGNEYTLSTCQLDFCLPAKFDLKYIDKDGEKKTPVVLHRAILG 462 Query: 321 AM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 ++ R +A ++E + KG + P +AP ++ ++ +K ++ K+ L + V Sbjct: 463 SLDRFMAYILEET---KGNL-PTWLAPVQVRVMPVKTDNEDLMAYAHKVVDALDAIDVRV 518 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 DD E++G + + P +++G F + +RL G Sbjct: 519 ELDDRAEKLGYRMREGQVQKVPYLLVIG--FNEAENGTVSYRLHG 561 >gi|323337178|gb|EGA78432.1| Ths1p [Saccharomyces cerevisiae Vin13] Length = 734 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + ++ S G WLP G + + + ++R E + G E+ P + ++ LW SG + +Y Sbjct: 341 LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYK 400 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F+S +SYR LP+ + R+E G+ Sbjct: 401 ENMFTF-EVEKETFGLKPMNCPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 459 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 460 TRVRRFQQDDAHIF 473 >gi|317121664|ref|YP_004101667.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] gi|315591644|gb|ADU50940.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] Length = 644 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G W P G + RE Q R G E+ P + DLW SG ++ Y + M Sbjct: 265 APGYAFWHPKGATVYGLLERFSRELQARYGYQEVRTPEILKVDLWHRSGHWEHYRENMF- 323 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L +R P + I+RS I+SYR+LP + R E G++R R Sbjct: 324 LIEREGAQFGVKPMNCPGHCLIYRSRIRSYRDLPLRLAEYGRLARFERSGTLHGLLRVRG 383 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 384 FEQDDAHLF 392 >gi|50284855|ref|XP_444855.1| hypothetical protein [Candida glabrata CBS 138] gi|49524157|emb|CAG57748.1| unnamed protein product [Candida glabrata] Length = 673 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/338 (20%), Positives = 129/338 (38%), Gaps = 70/338 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E V+ + I+SYR+LP Q R E + +R+REFL ++ ++ L Sbjct: 276 PTSETVIYPYYAKWIQSYRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTAFLDQ 335 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + ++ ++ Y I++ L ++P +V E + F F Sbjct: 336 DDAEKEVLQVLDFYAGIYNE--LLAVP----------------VVKGKKTEKEKFAGAAF 377 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + VE + +PE + RGI+ Sbjct: 378 ------------------TTTVEGY------------------IPE----TGRGIQGATS 397 Query: 288 FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 + G +S + + + G +H Y S+G+ + R + ++ + D KG++ P V Sbjct: 398 HHLGQNFSKMFNLSVENPLGPEHPKVYAYQNSWGL-STRTLGVMVMTHSDNKGLVVPPRV 456 Query: 345 A-------PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVAD 396 A P I+ + DA + + RL K F D + G +F+ + Sbjct: 457 AQHQAVVIPVGITKKTTDEQRKSIHDAAKNVEDRLLKASVRAFGDYNDNYTPGWKFSQYE 516 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L G PL+V +G K + +V + R + + L+E+ Sbjct: 517 LKGIPLRVELGPKDIEQGQVVVVRRNDSRKYVVKLDEL 554 >gi|82947575|dbj|BAE52439.1| Prolyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] Length = 471 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/258 (21%), Positives = 100/258 (38%), Gaps = 61/258 (23%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ D F I+SYR+LP Q R E+RPR +R+ EFL ++ Sbjct: 87 EEPLVVRPTSETIIGDAFARWIQSYRDLPMLVNQWANVVRWEMRPRI-FLRTAEFLWQEG 145 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E + KM L ++ + + + M +G +HE Sbjct: 146 HTAHATAEEAMDETLKM----LEVYRVMAEEVLAMPV---IVGEKPAHE----------- 187 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 FP D S+ ++++ A A TS Sbjct: 188 --------RFP------GADKTYSIEAMMQDGKALQAGTS-------------------- 213 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 + G +S + ++ A G + + S+G+ + R++ VI S D G+ Sbjct: 214 -------HFLGQHFSKAQNIRYQTAQGGEEFCYTTSWGV-STRLIGGVIMSHADDNGLRV 265 Query: 341 PDSVAPFKISLINIKAHD 358 P +AP +I + I D Sbjct: 266 PPRIAPKQIVFVPITRAD 283 >gi|188024082|ref|ZP_02996824.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188019126|gb|EDU57166.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] Length = 472 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 4/144 (2%) Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y G ++ F+G D + HYV S G+ R++ A+I D +G+I P +A + Sbjct: 232 YLGQFFAKAYDIKFQGQDNQMHYVHQMSAGLST-RIIGALIMVHADDQGLILPPDIAFNQ 290 Query: 349 ISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 I++++I A+ + E+I LS +F D + +G + A ++ G P+ ++VG Sbjct: 291 IAILSIFANKNPQLLTISEQIRNELSDYR--LFEDHSDKGVGYKLAQQEIEGTPICILVG 348 Query: 408 SKFVSDSKVEIKHRLTGIREDMSL 431 K +++ +V + R T + +++L Sbjct: 349 VKELANQQVVLVRRDTHEKINVNL 372 >gi|254382003|ref|ZP_04997365.1| prolyl-tRNA synthetase 2 [Streptomyces sp. Mg1] gi|194340910|gb|EDX21876.1| prolyl-tRNA synthetase 2 [Streptomyces sp. Mg1] Length = 470 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 66/338 (19%), Positives = 133/338 (39%), Gaps = 65/338 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ D F ++SYR+LP Q R E MR R FL Sbjct: 103 EEPVVVRPTSETIINDYFSKWVQSYRDLPLLINQWANVVRWE-------MRPRVFLRTSE 155 Query: 161 YSFDLTPEG-SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET 219 + L EG + H+ + Y H T Sbjct: 156 F---LWQEGHTAHATYEDARDYAARIH--------------------------------T 180 Query: 220 QVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 V+ DFM +++ ++ ++ + TA ++ L E Sbjct: 181 DVYG--DFMT-----------NVLGIDVVLGRKTAKERFAGAINTLTL-----EGMMGDG 222 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + +++G GT ++ + + +GK V S+G+ + R+V +I S D G+ Sbjct: 223 KALQLGTSHELGTNFAKAFNTQYLSKEGKQELVWQTSWGV-STRMVGGLIMSHGDDNGLR 281 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLL 398 P +A ++ ++ IK + V + ++ A+L G V DD + G + +L Sbjct: 282 VPPRLAHVQVVVMAIKGDEAVAK--VRELGAQLKAAGLRVQVDDRVDTPFGRRAVDWELK 339 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P+++ +G + + + + R+ G +E + + +++ Sbjct: 340 GVPVRIEIGPRDLENGTAMLARRIPGGKEAVQISALLD 377 >gi|225852573|ref|YP_002732806.1| threonyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|256263936|ref|ZP_05466468.1| threonyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|254783511|sp|C0RJ44|SYT_BRUMB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225640938|gb|ACO00852.1| threonyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|263094080|gb|EEZ18002.1| threonyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] Length = 658 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 235 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLQI 409 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 410 NDHILSVYKDFGFEEITIKLSTRPEKRVGSD 440 >gi|238591358|ref|XP_002392585.1| hypothetical protein MPER_07812 [Moniliophthora perniciosa FA553] gi|215458845|gb|EEB93515.1| hypothetical protein MPER_07812 [Moniliophthora perniciosa FA553] Length = 210 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G + +N+ ++R E + G E+ P + + LW SG + +Y M Sbjct: 32 SPGSCFWLPHGTRIYNNLVELLRSEYWKRGYQEVISPNMFNTKLWETSGHWQNYTDGMFV 91 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L +K + P + IF S +SY+ LP + + R+E G+ R R Sbjct: 92 LDVEKEKWAL-KPMNCPGHCIIFDSRDRSYKELPIRMAEFGIIHRNEASGALTGLTRVRR 150 Query: 155 FLMKDAYSF 163 F+ D + F Sbjct: 151 FVQDDTHVF 159 >gi|21231898|ref|NP_637815.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767974|ref|YP_242736.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|188991100|ref|YP_001903110.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. B100] gi|25453287|sp|Q8P7Z2|SYT_XANCP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81306049|sp|Q4UW57|SYT_XANC8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229558465|sp|B0RRG9|SYT_XANCB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21113622|gb|AAM41739.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573306|gb|AAY48716.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|167732860|emb|CAP51054.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 636 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 77/394 (19%), Positives = 141/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 258 LQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQD 317 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 318 AMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 376 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F L + + L ++ G I ++ P +G D + Sbjct: 377 RVRGFTQDDGHVFCLESQ-IEAEVTAFHQQALAVYTAFGFDDIQIKIALRPEKRLGDDAT 435 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A V C ++ + P A Y + H L Sbjct: 436 WDKAEAALRSALGV-CGVEWQELPGEG-------------------AFYGPKIEYH---L 472 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 473 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDEHSQ-------KKHPVMLHRAIVGSMERFIG 525 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G +P +AP ++ + NI D+ K L+ G V D E+ Sbjct: 526 ILIEHHAGA---FPAWLAPVQVVVANITDAQAEYVDSVRKT---LANQGFRVSADLRNEK 579 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++VG + + V ++ R Sbjct: 580 IGYKIREHTLQRVPYLLVVGDREKENGAVAVRTR 613 >gi|300691315|ref|YP_003752310.1| threonine tRNA synthetase [Ralstonia solanacearum PSI07] gi|299078375|emb|CBJ51025.1| threonine tRNA synthetase [Ralstonia solanacearum PSI07] Length = 635 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + V +R + G E+ P + LW SG + +Y K Sbjct: 255 LQEEAPGMVFWHPKGWEIWQAVEQYMRGRLSNAGYREVRTPQVMDRTLWEHSGHWQNY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + IF ++SYR+LP + R+E G+M Sbjct: 314 ENMFVTESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSF 163 R R F+ DA+ F Sbjct: 374 RVRGFVQDDAHIF 386 >gi|332158991|ref|YP_004424270.1| threonyl-tRNA synthetase [Pyrococcus sp. NA2] gi|331034454|gb|AEC52266.1| threonyl-tRNA synthetase [Pyrococcus sp. NA2] Length = 625 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 73/331 (22%), Positives = 134/331 (40%), Gaps = 50/331 (15%) Query: 117 IFRSHIKSYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSY 174 I + + SY++LP Y++ + FR E R G+ R R F M D ++ E +K + Sbjct: 304 ISKDAVISYKHLPLRMYELTRYSFRREKRGELSGLRRLRAFTMPDMHTLAKDLEQAKEEF 363 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 K F + + +GL D E + ++DF Sbjct: 364 KKQFKLSMEVLEGVGLTP----------------------DDYEVAIRFTEDFW-----K 396 Query: 235 ENTDF----DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 EN DF +I ++E W + D+L + +S I+V + F Sbjct: 397 ENRDFIIELVKLIGKPVLIEMWKQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERF 456 Query: 291 GTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESS----HDGKGIIWPDSV 344 G KY +G++ Y + + GA+ RV+ A++E GK + P + Sbjct: 457 GIKYY--------DENGEERYPLILHCSPSGAIERVMYAILEKQAKLMQQGKKPMLPVWL 508 Query: 345 APFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 +P ++ +I + ++D + D + +L V DD E++ + A+ P V Sbjct: 509 SPIQVRVIPV-SNDFL--DYALYVAGKLEGAKIRVDVDDEDERLNKKIRRAEKEWIPYIV 565 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +VG+K + ++ R G + + +EE+I Sbjct: 566 VVGAKEKETGTIMVRRREDGKQYETRIEELI 596 >gi|299066586|emb|CBJ37776.1| threonine tRNA synthetase [Ralstonia solanacearum CMR15] Length = 635 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + V +R G E+ P + LW SG +++Y K Sbjct: 255 LQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDRGLWERSGHWENY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + IF ++SYR+LP + R+E G+M Sbjct: 314 ENMFVTESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSF 163 R R F+ DA+ F Sbjct: 374 RVRGFVQDDAHIF 386 >gi|115475758|ref|NP_001061475.1| Os08g0295300 [Oryza sativa Japonica Group] gi|38175524|dbj|BAD01219.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group] gi|38175707|dbj|BAD01414.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group] gi|113623444|dbj|BAF23389.1| Os08g0295300 [Oryza sativa Japonica Group] gi|215687347|dbj|BAG91912.1| unnamed protein product [Oryza sativa Japonica Group] Length = 745 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 89/441 (20%), Positives = 178/441 (40%), Gaps = 47/441 (10%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIR 58 +R K + +L+E A+ H+L+ +T HQ S G +LP G + + +R Sbjct: 336 KRLKEYKHLLEE----AKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLR 391 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 ++ G E+ P + + LW SG +Y KE + + + + P + +F Sbjct: 392 QQYRDRGYQEVLSPNIYNMQLWETSGHAANY-KENMFVFEIEKQEFGLKPMNCPGHCLMF 450 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP + R+EL G+ R R F DA+ F + + Sbjct: 451 EHRVRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVL 510 Query: 178 -FVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 F++Y ++ G K + + GD I + E Q+ ++ +F P + Sbjct: 511 DFINY--VYEIFGFKYELELSTRPEKYLGD-----IETWNKAEQQL--TEALNEFGKPWQ 561 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + D A Y D+ +FD+L + + ++ F YS Sbjct: 562 INEGDG------------AFYGPKIDI---GVFDALKRKFQCATLQLDFQLPLRFKLTYS 606 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 A + V + +G++ + A++ ++GK WP ++P + + +I Sbjct: 607 AEDEAKL------ERPVMIHRAILGSVERMFAILLEHYNGK---WPLWLSPRQAIVCSIS 657 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 ++ + +++ AR+ + G V D+ I + A L F ++VG++ + Sbjct: 658 SNSV---EYAKQVRARIHEAGFHVAIDETDRTIQKKVREAQLAQFNYILVVGAQEAETGQ 714 Query: 416 VEIKHRLTGIREDMSLEEVIN 436 V ++ R +S++++I Sbjct: 715 VSVRVRDKAELATVSIDDIIT 735 >gi|145219006|ref|YP_001129715.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265] gi|189083618|sp|A4SCK4|SYT_PROVI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145205170|gb|ABP36213.1| Ser-tRNA(Thr) hydrolase [Chlorobium phaeovibrioides DSM 265] Length = 666 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 6/132 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + + ++EEQ R G + + P + + DL+ SG Y Y L Sbjct: 273 GLPVWLPKGAIIRQELESFLKEEQRRRGYLPVYTPHIGNIDLYKRSGHYPYYSDSQFPPL 332 Query: 95 RLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D KA Y P + I+ S ++SYR+LP + +R E G++R Sbjct: 333 TYHDEEGKAEQYLLKPMNCPHHHLIYSSKMRSYRDLPVRLAEFGTVYRHEQSGELNGLVR 392 Query: 152 SREFLMKDAYSF 163 +R F D++ + Sbjct: 393 ARGFTQDDSHIY 404 >gi|297620271|ref|YP_003708408.1| Threonyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] gi|297375572|gb|ADI37402.1| Threonyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] Length = 642 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 91/443 (20%), Positives = 159/443 (35%), Gaps = 60/443 (13%) Query: 5 KYFLPILQENPRDAEIASHKLML------RTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 +Y + + RD + KL L GM H KG+ W L +R Sbjct: 227 EYLHQMEEAKKRDHRVIGSKLDLFSFKEEAAGMPFIHPKGMTVWTELTN--------YLR 278 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 E +E+ P + S LW SG + +Y + M ++ D P + + Sbjct: 279 ECLGSANYVEIKTPIMLSRGLWETSGHWFNYRENMF-TSEIEDHDYAIKPMNCPGCMLYY 337 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +SH+ SYR LP +I R E G+ R R F DA+ F + P + + Sbjct: 338 KSHVHSYRELPLRVAEIGNVHRYEPSGALSGLFRVRSFHQDDAHIF-MKPSDIEGEILSL 396 Query: 178 FVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 + +++ GL + R E G IG D E T + K D+ I Sbjct: 397 LNLFEKLYSTFGLSYHLELSTRPEKGTIGTDEEWE----QATAGLKNALDKWGHDYKINE 452 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 + F Y D H + D++ + +++ F +Y Sbjct: 453 GDGAF----------------YGPKIDFH---IRDAINRTWQCGTIQLDMALPQRFALEY 493 Query: 295 SLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 + +DG+ H M I G++ ++ GK +W ++P + ++ Sbjct: 494 T--------ASDGERHRPVMLHRAIFGSIERFMGILIEHFAGKFPLW---ISPLQARILT 542 Query: 354 IK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 + H+ + +K L + G V D GE + + A L + VG K + Sbjct: 543 VADRHEPYAHELMQK----LKQQGFRVDIDATGESVSKKVRTAQLTQINYILTVGDKEME 598 Query: 413 DSKVEIKHRLTGIREDMSLEEVI 435 + ++ R + ++ LE I Sbjct: 599 HKTLNLRTRDNVVHGEIDLEAFI 621 >gi|149918430|ref|ZP_01906920.1| prolyl-tRNA synthetase [Plesiocystis pacifica SIR-1] gi|149820730|gb|EDM80140.1| prolyl-tRNA synthetase [Plesiocystis pacifica SIR-1] Length = 517 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 66/329 (20%), Positives = 125/329 (37%), Gaps = 75/329 (22%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ F I S+R+LP Q R ELR R +R+ EFL ++ ++ T Sbjct: 130 PTSETIIGHFFAKWIDSHRDLPLKINQWANVMRWELRTRM-FLRTTEFLWQEGHTAHAT- 187 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + + L++ H + GD + E + + T Sbjct: 188 ------HEEAIEETLQMLH---------------VYGDFAEEVLAVPVTR---------- 216 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 I + + F + I E W + ++ G Sbjct: 217 ---GIKTASERFAGALETYCI-EAWMQ-----------------------DGKALQAGTS 249 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 G + F+ G +V S+G+ + R++ ++ + D G++ P VAP Sbjct: 250 HDLGQNFGKAFDVKFQNEAGDLEHVWQTSWGV-STRLIGGLVMTHSDDDGLVLPPRVAPI 308 Query: 348 KISLINI--KAHD-QVCRDACEKIYARLSKVG-----------CDVFWDDMGEQIGSQFA 393 ++I I KAH+ + +A E++ +LS + +V DD + G++F Sbjct: 309 HAAIIPIFRKAHEKERVMEAAERLKEQLSAIDIAPERARYRDFLEVVIDDRDMRPGAKFY 368 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + G P+++ +G K + +V +K R+ Sbjct: 369 DWERRGVPMRIELGPKDLDKGQVCMKMRV 397 >gi|162319780|ref|YP_422998.2| prolyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] gi|114152208|sp|Q2W136|SYP_MAGMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 500 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/258 (21%), Positives = 100/258 (38%), Gaps = 61/258 (23%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ D F I+SYR+LP Q R E+RPR +R+ EFL ++ Sbjct: 116 EEPLVVRPTSETIIGDAFARWIQSYRDLPMLVNQWANVVRWEMRPRI-FLRTAEFLWQEG 174 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E + KM L ++ + + + M +G +HE Sbjct: 175 HTAHATAEEAMDETLKM----LEVYRVMAEEVLAMPV---IVGEKPAHE----------- 216 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 FP D S+ ++++ A A TS Sbjct: 217 --------RFP------GADKTYSIEAMMQDGKALQAGTS-------------------- 242 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 + G +S + ++ A G + + S+G+ + R++ VI S D G+ Sbjct: 243 -------HFLGQHFSKAQNIRYQTAQGGEEFCYTTSWGV-STRLIGGVIMSHADDNGLRV 294 Query: 341 PDSVAPFKISLINIKAHD 358 P +AP +I + I D Sbjct: 295 PPRIAPKQIVFVPITRAD 312 >gi|254580109|ref|XP_002496040.1| ZYRO0C09086p [Zygosaccharomyces rouxii] gi|238938931|emb|CAR27107.1| ZYRO0C09086p [Zygosaccharomyces rouxii] Length = 716 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 6/136 (4%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M ++ S G WLP G + + +++ E + G E+ P + ++ LW SG + Y Sbjct: 321 MFNEMSPGSCFWLPHGTRIYSTLVDLLKNEYRKRGYEEVITPNMYNSKLWETSGHWGHYK 380 Query: 91 KEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 + M + +YG P + +F+S +SYR LP+ + R+E Sbjct: 381 ENMFTFEVEKE---MYGLKPMNCPGHALMFKSRERSYRELPWRVADFGVIHRNEFSGALT 437 Query: 148 GVMRSREFLMKDAYSF 163 G+ R R F DA+ F Sbjct: 438 GLTRVRRFQQDDAHIF 453 >gi|218132749|ref|ZP_03461553.1| hypothetical protein BACPEC_00610 [Bacteroides pectinophilus ATCC 43243] gi|217992475|gb|EEC58478.1| hypothetical protein BACPEC_00610 [Bacteroides pectinophilus ATCC 43243] Length = 477 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 72/156 (46%), Gaps = 3/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ + D K YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFGIQYTDKDNKLKYVHQTSWGM-TTRLIGALIMVHGDNSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ ++ + D +I LS V DD + G +F+ ++ Sbjct: 284 VLPPRIAPVQVCIVPVMQKKPGVLDKAFEIKEVLSNFRVKV--DDSDKSPGWKFSEQEMR 341 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ +G + + ++ + R G + +SL+E+ Sbjct: 342 GIPLRIEMGPRDIEANQAVLVRRDNGEKITVSLDEI 377 Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 10/137 (7%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSY 89 M + KG + P G +N+ + TG + +P + + L E + + Sbjct: 32 MCYSSVKGCMIFKPDGYAIWENIQHELDRRFKATGVKNVYMPMFIPESLLQREKDHVEGF 91 Query: 90 GKEMLRLADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDEL 143 E+ + + + M PT E + D +++ I+SYR+LP Q +++ E Sbjct: 92 APEVAWVTEGGLQPLQEKMCVRPTSETLFCDYYKNEIQSYRDLPQLCNQWCSVVRWEKET 151 Query: 144 RPRFGVMRSREFLMKDA 160 RP +RSREFL ++ Sbjct: 152 RP---FLRSREFLWQEG 165 >gi|225550771|ref|ZP_03771720.1| proline--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379925|gb|EEH02287.1| proline--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 472 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 4/144 (2%) Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y G ++ F+G D + HYV S G+ R++ A+I D +G+I P +A + Sbjct: 232 YLGQFFAKAYDIKFQGQDNQMHYVHQMSAGLST-RIIGALIMVHADDQGLILPPDIAFNQ 290 Query: 349 ISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 I++++I A+ + E+I LS +F D + +G + A ++ G P+ ++VG Sbjct: 291 IAILSIFANKNPQLLTISEQIRNELSDYR--LFEDHSDKGVGYKLAQQEIEGTPICILVG 348 Query: 408 SKFVSDSKVEIKHRLTGIREDMSL 431 K +++ +V + R T + +++L Sbjct: 349 VKELANQQVVLVRRDTHEKINVNL 372 >gi|124805808|ref|XP_001350543.1| bifunctional aminoacyl-tRNA synthetase, putative [Plasmodium falciparum 3D7] gi|74862875|sp|Q8I5R7|SYP_PLAF7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|23496667|gb|AAN36223.1| bifunctional aminoacyl-tRNA synthetase, putative [Plasmodium falciparum 3D7] Length = 746 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 11/165 (6%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + R I+ Y GT ++ F+ + YV S+G R + +I + D KG Sbjct: 470 NGRAIQAATSHYLGTNFAKMFKIEFEDENEVKQYVHQTSWGC-TTRSIGIMIMTHGDDKG 528 Query: 338 IIWPDSVAPFKISLINI--KAHDQ-----VCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 ++ P +V+ +K+ ++ I K D+ C+D EKI +++ C V+ D G Sbjct: 529 LVLPPNVSKYKVVIVPIFYKTTDENAIHSYCKDI-EKILKN-AQINC-VYDDRASYSPGY 585 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +F +L G P+++ VG K + ++ I R + ++ E V+ Sbjct: 586 KFNHWELRGIPIRIEVGPKDLQNNSCVIVRRDNNEKCNVKKESVL 630 Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 30/55 (54%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 PT E +M +F I+SYR+LP Q R E + +R+REFL ++ ++ Sbjct: 358 PTSETIMYSVFPKWIRSYRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGHT 412 >gi|17546296|ref|NP_519698.1| threonyl-tRNA synthetase [Ralstonia solanacearum GMI1000] gi|22654118|sp|Q8XZ29|SYT_RALSO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|17428593|emb|CAD15279.1| probable threonyl-trna synthetase (threonine--trna ligase) protein [Ralstonia solanacearum GMI1000] Length = 635 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + V +R G E+ P + LW SG +++Y K Sbjct: 255 LQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDRGLWERSGHWENY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + IF ++SYR+LP + R+E G+M Sbjct: 314 ENMFVTESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSF 163 R R F+ DA+ F Sbjct: 374 RVRGFVQDDAHIF 386 >gi|242309942|ref|ZP_04809097.1| threonyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] gi|239523239|gb|EEQ63105.1| threonyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] Length = 605 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 6/129 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + N+ ++ + + G + P + + +W SG Y +YG+ M Sbjct: 231 GLPIWLPKGSRLRRNIENLLTKALIQRGYEPVRGPEILKSAVWKTSGHYANYGENMYFTT 290 Query: 98 DRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + YG P + +++S ++SYR LP FY+ + R E G++R RE Sbjct: 291 ---IDGVEYGIKPMNCVGHIKVYQSALRSYRELPLRFYEYGVVHRHEKSGVLHGLLRVRE 347 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 348 FTQDDAHIF 356 >gi|297191796|ref|ZP_06909194.1| prolyl-tRNA synthetase 2 [Streptomyces pristinaespiralis ATCC 25486] gi|197721687|gb|EDY65595.1| prolyl-tRNA synthetase 2 [Streptomyces pristinaespiralis ATCC 25486] Length = 470 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 68/347 (19%), Positives = 137/347 (39%), Gaps = 72/347 (20%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GKE+ ++ ++ PT E ++ D F ++SYR+LP Q R EL Sbjct: 99 GKEL-------EEPVVVRPTSETIINDYFSKWVQSYRDLPLLINQWANVVRWEL------ 145 Query: 150 MRSREFLMKDAYSFDLTPEG-SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R FL + L EG + H+ + Y HR D+ Sbjct: 146 -RPRVFLRTTEF---LWQEGHTAHATYEDARDYAARIHR-----------------DVYA 184 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 +F+V +++ ++ ++ + T ++ L Sbjct: 185 DFMV----------------------------NVLGIDVVLGRKTPRERFAGAINTLTLE 216 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + + K +++G GT ++ + ++ DG+ V S+G+ + R+V + Sbjct: 217 GMMGDGK-----ALQMGTSHELGTNFAKAFNTSYLSKDGQQELVWQTSWGV-STRMVGGL 270 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQ 387 I S D G+ P +A ++ ++ IK + V + ++ L+ G V DD + Sbjct: 271 IMSHGDDNGLRVPPRLAAVQVVVMAIKGDEAVAK--VHEVGRLLTAAGLRVHVDDRVDTP 328 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G + +L G P+++ +G + + + R+ G +E +SL+ + Sbjct: 329 FGRRAVDWELKGVPVRIEIGPRDLEAGTAMLARRIPGGKEPVSLDSL 375 >gi|288918333|ref|ZP_06412686.1| prolyl-tRNA synthetase [Frankia sp. EUN1f] gi|288350228|gb|EFC84452.1| prolyl-tRNA synthetase [Frankia sp. EUN1f] Length = 471 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 3/146 (2%) Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G ++ F GADG H S+G + R++ +I + D G+ P ++AP ++ Sbjct: 233 LGQNFARAFDIDFLGADGGRHLAWTTSWG-SSTRMIGGLIMAHGDDNGLRIPPALAPTQV 291 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGS 408 ++ ++ + V A E I L+ G V D G G + A+L G P++V +G Sbjct: 292 IVLPVRDDEAVVAKARE-ITDALTAAGVRVSLDARPGLSFGRRVTDAELKGIPVRVEIGP 350 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEV 434 + ++ V + R TG + + L +V Sbjct: 351 RDLAAGNVTVARRDTGEKHPVPLTDV 376 Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 ++ PT E V+ + +SYR+LP Q R ELRPR +R+ EFL ++ ++ Sbjct: 106 VVVRPTSETVIGEYMAKWTQSYRDLPLLLNQWANVVRWELRPRL-FLRTSEFLWQEGHT 163 >gi|185178982|ref|ZP_02964737.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188518276|ref|ZP_03003799.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524364|ref|ZP_03004396.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867791|ref|ZP_03079791.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273755|ref|ZP_03206289.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554280|ref|YP_002284879.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225551615|ref|ZP_03772561.1| proline--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|259511630|sp|B5ZBT9|SYP_UREU1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|184209266|gb|EDU06309.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188998019|gb|EDU67116.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659957|gb|EDX53337.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660488|gb|EDX53745.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249510|gb|EDY74292.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541781|gb|ACI60010.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379430|gb|EEH01795.1| proline--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 472 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 4/144 (2%) Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y G ++ F+G D + HYV S G+ R++ A+I D +G+I P +A + Sbjct: 232 YLGQFFAKAYDIKFQGQDNQMHYVHQMSAGLST-RIIGALIMVHADDQGLILPPDIAFNQ 290 Query: 349 ISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 I++++I A+ + E+I LS +F D + +G + A ++ G P+ ++VG Sbjct: 291 IAILSIFANKNPQLLTISEQIRNELSDYR--LFEDHSDKGVGYKLAQQEIEGTPICILVG 348 Query: 408 SKFVSDSKVEIKHRLTGIREDMSL 431 K +++ +V + R T + +++L Sbjct: 349 VKELANQQVVLVRRDTHEKINVNL 372 >gi|171920903|ref|ZP_02932054.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|171903119|gb|EDT49408.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] Length = 472 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 4/144 (2%) Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y G ++ F+G D + HYV S G+ + R++ A+I D +G+I P +A + Sbjct: 232 YLGQFFAKAYDIKFQGQDNQMHYVHQMSAGL-STRIIGALIMVHADDQGLILPPDIAFNQ 290 Query: 349 ISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 I++++I A+ + E+I LS +F D + +G + A ++ G P+ ++VG Sbjct: 291 IAILSIFANKNPQLLTISEQIRNELSDYR--LFEDHSDKGVGYKLAQQEIEGTPICILVG 348 Query: 408 SKFVSDSKVEIKHRLTGIREDMSL 431 K +++ +V + R T + +++L Sbjct: 349 VKELANQQVVLVRRDTHEKINVNL 372 >gi|169617674|ref|XP_001802251.1| hypothetical protein SNOG_12019 [Phaeosphaeria nodorum SN15] gi|111059311|gb|EAT80431.1| hypothetical protein SNOG_12019 [Phaeosphaeria nodorum SN15] Length = 779 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP GQ + + A +REE G E+ P + S+ LW SG + Y Sbjct: 343 FFHEASPGSPFFLPHGQIIFNTLQAFLREEYWNRGYQEVQSPNMYSSALWKVSGHWQHYH 402 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 ++M +K + P + IF+ +SYR LP + R+E G+ Sbjct: 403 EDMFTFDVEKEKWGL-KPMNCPGHALIFKHRERSYRELPIRMADFGVLHRNEASGALTGL 461 Query: 150 MRSREFLMKDAYSF 163 R R F D + F Sbjct: 462 TRVRRFQQDDTHIF 475 >gi|325090828|gb|EGC44138.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 578 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 14/144 (9%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 Q+S G +LP G L+ + + +R + + G +E+ P++ LW SG + +Y +M Sbjct: 105 QYSPGSPLFLPNGTHILNKLTSFLRAQYTKYGFLEVLTPSIYKKSLWKVSGHWQNYKDDM 164 Query: 94 LRLADRN-------------DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 + RN D++ P + +F+S SYR LP + R Sbjct: 165 YEVRGRNATGEQTAETQIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHR 224 Query: 141 DELRPRF-GVMRSREFLMKDAYSF 163 +E+ G+ R R F D + F Sbjct: 225 NEISGSLSGLTRVRRFHQDDGHIF 248 >gi|288924947|ref|ZP_06418883.1| threonine--tRNA ligase [Prevotella buccae D17] gi|288338137|gb|EFC76487.1| threonine--tRNA ligase [Prevotella buccae D17] Length = 673 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 86/408 (21%), Positives = 143/408 (35%), Gaps = 65/408 (15%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + ++R E+ P + L+V SG Y YGK+ + Sbjct: 262 GKGLPIWLPKGTELRLRLQELLRSMLRPYNYQEVITPGIGGKSLYVTSGHYAHYGKDAFQ 321 Query: 96 L--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 D+ + P + ++F +SY++LP + FR E G+ R Sbjct: 322 PIHTPEEDEEYMLKPMNCPHHCEVFARKPRSYKDLPLRIAEFGTVFRYEKSGELHGLTRV 381 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F + P+ K + L++F+ G + + I Sbjct: 382 RTFTQDDAHIF-VRPDQVKAEFETNIDIILKVFNIFGFDNYEAQ--------------IS 426 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 L D + + + D E W A + EK + Sbjct: 427 LRDPNDKEKYIGSD-----------------------EVWEESETAIKEACAEKGLKARV 463 Query: 273 ENKRVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYG 318 E + G + +G + GT Y+LP + D K V + Sbjct: 464 ELGEAAFYGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAP 523 Query: 319 IGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 G++ AV+ G +W PD VA IS + D + + VG Sbjct: 524 FGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--------EKYNDYAKSVARYFDSVG 575 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 D+ E+IG + +L P VIVG K ++ V ++ + G Sbjct: 576 VRAIIDERNEKIGRKIRDNELKRVPYMVIVGEKESAEGLVSMRKQGGG 623 >gi|217974767|ref|YP_002359518.1| tRNA synthetase class II [Shewanella baltica OS223] gi|217499902|gb|ACK48095.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS223] Length = 398 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 2/131 (1%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 + G+ W P G ++ +R R G E++ P +LW SG D + + M Sbjct: 19 QAPGMIFWHPNGWVLFRDIQEHMRRVYRRNGFEEVNTPVFMKKELWQTSGHMDMFAENMF 78 Query: 95 RLADR-NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 + N + P +F+ + S+R+LP ++ L R+E G +R+ Sbjct: 79 FGGGKENMDEYVLKPMSCPAHILLFKRGVHSHRDLPLRLFEFGLVHRNESSGSLNGCLRA 138 Query: 153 REFLMKDAYSF 163 R+F DA+ F Sbjct: 139 RQFTQDDAHVF 149 >gi|330723868|gb|AEC46238.1| prolyl-tRNA synthetase [Mycoplasma hyorhinis MCLD] Length = 480 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/157 (21%), Positives = 77/157 (49%), Gaps = 3/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y +S FK + S+G+ + R++ +I + D +G+ Sbjct: 221 GKALQSGTSHYLAQNFSKSFDIVFKNDKNEFENPYQTSWGV-STRLIGGLIMTHGDDRGV 279 Query: 339 IWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I P +AP ++ ++ + A + + ++I+ +L K+ + D Q G + + +++ Sbjct: 280 ILPPKIAPIQVDILELFAIKNPIVSIVAKQIFEKL-KIKFTLRIDSTDNQPGYKASRSEV 338 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 LG PL++ VG + + ++V I R T + + +E+V Sbjct: 339 LGTPLRIEVGPRDLEKNQVAIVRRDTLEKHQVEVEKV 375 >gi|307721910|ref|YP_003893050.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] gi|306980003|gb|ADN10038.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] Length = 602 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G WLP G + + +++ + + G + P + +DLW+ SG Y +YG+ M Sbjct: 228 GFPIWLPAGGRLRARLESLLFKAHRKRGYEPVRGPEMLRSDLWMTSGHYQNYGENMY-FT 286 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + ++ + SYR+LP +++ + R E G+ R REF Sbjct: 287 HIDELEFGVKPMNCVGHIKVYEDELHSYRDLPIKYFEYGVVHRHEASGALHGLFRVREFT 346 Query: 157 MKDAYSF 163 DA+ F Sbjct: 347 QDDAHIF 353 >gi|294852343|ref|ZP_06793016.1| threonyl-tRNA synthetase [Brucella sp. NVSL 07-0026] gi|294820932|gb|EFG37931.1| threonyl-tRNA synthetase [Brucella sp. NVSL 07-0026] Length = 683 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 260 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGAGVVFWHAKGWKMFQNLVSYMRRRLDS 315 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 316 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 375 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 376 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLRI 434 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 435 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 465 >gi|190406293|gb|EDV09560.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a] gi|259147177|emb|CAY80430.1| Ths1p [Saccharomyces cerevisiae EC1118] gi|323333154|gb|EGA74554.1| Ths1p [Saccharomyces cerevisiae AWRI796] gi|323354584|gb|EGA86420.1| Ths1p [Saccharomyces cerevisiae VL3] Length = 734 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + ++ S G WLP G + + + ++R E + G E+ P + ++ LW SG + +Y Sbjct: 341 LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYK 400 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F+S +SYR LP+ + R+E G+ Sbjct: 401 ENMFTF-EVEKETFGLKPMNCPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 459 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 460 TRVRRFQQDDAHIF 473 >gi|4619|emb|CAA26666.1| unnamed protein product [Saccharomyces cerevisiae] Length = 734 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + ++ S G WLP G + + + ++R E + G E+ P + ++ LW SG + +Y Sbjct: 341 LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYK 400 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F+S +SYR LP+ + R+E G+ Sbjct: 401 ENMFTF-EVEKETFGLKPMNCPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 459 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 460 TRVRRFQQDDAHIF 473 >gi|300722778|ref|YP_003712069.1| threonine tRNA synthetase [Xenorhabdus nematophila ATCC 19061] gi|297629286|emb|CBJ89885.1| threonine tRNA synthetase [Xenorhabdus nematophila ATCC 19061] Length = 642 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 76/395 (19%), Positives = 150/395 (37%), Gaps = 44/395 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + +W ++G +++Y + Sbjct: 256 MQEEAPGMAFWHNDGWTIFRELETFVRTKLKEYQYQEVKGPFMMDRIMWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + + P + IF +KSYR+LP + R+E G+M Sbjct: 316 NMFTTSSENREYCV-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T + + ++ G + I ++ + P Sbjct: 375 RVRGFTQDDAHIF-CTEDQILQEVSSCIKMIYDVYGTFGFEKIVVKLSTRP--------- 424 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-KLFD 269 E ++ K + D ++ NSI ++ A E L+D Sbjct: 425 -------EKRIGTEKQW-----DEAEADLAKALTQNSIEFEYQPGEGAFYGPKIEFTLYD 472 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVA 326 L R + G + +SLP +SA++ G + + V + +G++ Sbjct: 473 CLD-------RAWQCGTV---QLDFSLPARLSASYVGENNERKVPVMIHRAVLGSLERFI 522 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ + G +P +AP ++ ++NI + +++ +L VG D E Sbjct: 523 GILTEEYAG---FFPTWLAPQQVVVMNITDGQS---NYVQELVKKLQDVGIRAKADLRNE 576 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +IG + L P ++ G K V KV ++ R Sbjct: 577 KIGFKIREHTLRRVPYMLVCGDKEVESGKVSVRTR 611 >gi|256273733|gb|EEU08659.1| Ths1p [Saccharomyces cerevisiae JAY291] Length = 734 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + ++ S G WLP G + + + ++R E + G E+ P + ++ LW SG + +Y Sbjct: 341 LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYK 400 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F+S +SYR LP+ + R+E G+ Sbjct: 401 ENMFTF-EVEKETFGLKPMNCPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 459 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 460 TRVRRFQQDDAHIF 473 >gi|14318437|ref|NP_116578.1| Ths1p [Saccharomyces cerevisiae S288c] gi|730881|sp|P04801|SYTC_YEAST RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|556869|emb|CAA86092.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae] gi|285812573|tpg|DAA08472.1| TPA: Ths1p [Saccharomyces cerevisiae S288c] Length = 734 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + ++ S G WLP G + + + ++R E + G E+ P + ++ LW SG + +Y Sbjct: 341 LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYK 400 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F+S +SYR LP+ + R+E G+ Sbjct: 401 ENMFTF-EVEKETFGLKPMNCPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 459 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 460 TRVRRFQQDDAHIF 473 >gi|299783724|gb|ADJ41722.1| Threonyl-tRNA synthase [Lactobacillus fermentum CECT 5716] Length = 601 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 76/386 (19%), Positives = 150/386 (38%), Gaps = 35/386 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + + +++ G + P L + + + SG +D Y ++M Sbjct: 217 GLPYWMPKGSTIRRTIERYVIDKEVGDGYEHVYTPVLMNLNAYKTSGHWDHYREDMFPPM 276 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D ++ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 277 DMGDGELLELRPMNCPSHIQIYKHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREM 336 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + K+ + ++ + R LS+ D Sbjct: 337 TLNDGHTF-VALDQIQDEFAKILKLIMDVYKDFNINDYTFR---------LSYR-----D 381 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T+ + + D M S D + L+ E A Y D+ + +L + Sbjct: 382 PKNTEKYFANDEMWERSQSMLKAAMDSMGLDYYEAEGEAAFYGPKLDIQTKT---ALGND 438 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 + +S ++ F K+ L + G DGK H M G +G M A + + Sbjct: 439 ETMSTIQLD----FMLPEKFDL----HYVGEDGKQHRPIMIHRGVVGTMERFVAYLTEIY 490 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G W +AP ++++I + D+ D + + D E++G + Sbjct: 491 KGAFPTW---LAPNQVNIIPVS--DEKHGDYADDLAREFRAAQLRTVVDHRSEKMGYKIR 545 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIK 419 + P ++VG V++ V ++ Sbjct: 546 ESQTQKVPYTLVVGEDEVANGTVSVR 571 >gi|256159790|ref|ZP_05457533.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1] gi|256255048|ref|ZP_05460584.1| threonyl-tRNA synthetase [Brucella ceti B1/94] gi|261222239|ref|ZP_05936520.1| threonyl-tRNA synthetase [Brucella ceti B1/94] gi|265998203|ref|ZP_06110760.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1] gi|260920823|gb|EEX87476.1| threonyl-tRNA synthetase [Brucella ceti B1/94] gi|262552671|gb|EEZ08661.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1] Length = 658 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 235 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLRI 409 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 410 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 440 >gi|151943085|gb|EDN61420.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae YJM789] Length = 734 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + ++ S G WLP G + + + ++R E + G E+ P + ++ LW SG + +Y Sbjct: 341 LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYK 400 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F+S +SYR LP+ + R+E G+ Sbjct: 401 ENMFTF-EVEKETFGLKPMNCPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 459 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 460 TRVRRFQQDDAHIF 473 >gi|281411969|ref|YP_003346048.1| threonyl-tRNA synthetase [Thermotoga naphthophila RKU-10] gi|281373072|gb|ADA66634.1| threonyl-tRNA synthetase [Thermotoga naphthophila RKU-10] Length = 640 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 3/136 (2%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 +++ G+ +LP G L+ + RE G E+ P + + LW SG +D Y + M Sbjct: 256 EYAPGMPFFLPKGVVVLNELMRFSRELHRERGYQEIFTPLIMNEQLWKISGHWDHYAENM 315 Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 +++++ P + +++S SYR+LP F++ R E G+MR Sbjct: 316 Y-FIEKDEERYAVKPMNCPGHILVYKSRTVSYRDLPLRFFEFGRVHRYERSGVLHGLMRV 374 Query: 153 REFLMKDAYSFDLTPE 168 R F DA+ F TP+ Sbjct: 375 RSFTQDDAHIF-CTPD 389 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 7/138 (5%) Query: 299 SATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + T+ G D K+H M I G++ ++ G +P +AP ++++I I Sbjct: 491 NVTYIGPDNKEHKAVMIHRAIYGSLERFFGILIEHFAGA---FPTWLAPIQVAVIPISEK 547 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D EKI R+S+ G VF+D+ E +G + A P +I+G K + K+ Sbjct: 548 HN---DGAEKIAKRISQEGFRVFFDNRRETLGYRIRQAQTQKIPYMIILGDKELESGKIS 604 Query: 418 IKHRLTGIREDMSLEEVI 435 ++ R +D+ LE + Sbjct: 605 VRTRTGKEIKDVDLEHFV 622 >gi|164656383|ref|XP_001729319.1| hypothetical protein MGL_3354 [Malassezia globosa CBS 7966] gi|159103210|gb|EDP42105.1| hypothetical protein MGL_3354 [Malassezia globosa CBS 7966] Length = 723 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 86/414 (20%), Positives = 162/414 (39%), Gaps = 77/414 (18%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-LWVESGRYDSYGKEM--L 94 G Y P +++ E + G S P S+D L E + + E+ + Sbjct: 244 GCYILKPWSYYVWESIQRFFDAEIKKIGVQNCSFPMFVSSDVLEREKDHVEGFAPEVAWV 303 Query: 95 RLADRND--KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 A ++D K + PT E VM + I+S+R+LP Q R E + +R+ Sbjct: 304 TKAGKSDLEKPVAIRPTSETVMYPYYAKWIQSHRDLPLRLNQWNSVVRWEFKHPQPFLRT 363 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR-LGLKSIP-MRAESGPIGGDLSHEF 210 REFL ++ ++ L E + + Y R++ L L +P +++E G L Sbjct: 364 REFLWQEGHTAHLHKEQADEEVRYILDLYRRVYEELLALPVVPGVKSEKEKFAGGLYTTT 423 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 + + +P+ S +S+ + ++ ++FD Sbjct: 424 V-----------------EGYVPTTGRGVQGGTS-HSLGQNFS------------RMFDI 453 Query: 271 LPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 ++ + + RG G +F + + L + IG M +V Sbjct: 454 TVQDPKATDETRGKPEGRLFVWQNSWGL------------------STRTIGVMVMVHG- 494 Query: 329 IESSHDGKGIIWPDSVAPFKISLI----------NIK-AHDQVCRDACEKIYARLSKVGC 377 D KG++ P V+ ++ L+ ++K A ++ C D E++ R + Sbjct: 495 -----DDKGLVMPPRVSQVQVVLVPCGLGVKVSQDVKDAVNKTCDDVAEQLRTRGIRAHA 549 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 D+ D+ G +F +L G PL++ VG K +S+ + R TG +E ++L Sbjct: 550 DLR-DNYNP--GFKFNDWELRGVPLRLEVGPKDLSNQSLIAVRRDTGAKESLAL 600 >gi|224534482|ref|ZP_03675058.1| threonine--tRNA ligase [Borrelia spielmanii A14S] gi|224514159|gb|EEF84477.1| threonine--tRNA ligase [Borrelia spielmanii A14S] Length = 581 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 77/409 (18%), Positives = 157/409 (38%), Gaps = 51/409 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG D Y M Sbjct: 205 GLVFFHPNGAKIRALIEDFWREEHSKNGYDILFSPHIGKSWLWQTSGHLDFYKDSMFEKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 265 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGMMRARGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ T ++ + ++ + G S+ + P +G D Sbjct: 325 QDDAHII-CTHSQVVDEIKEVLRFAIYMWSKFGFNSLKAYLSTKPEKFVGND-------- 375 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 +D + + F +P E I + A Y D+ K+ DSL Sbjct: 376 SDWEMSLKVLEEALSGFKVPYE------------IDKGGGAFYGPKIDL---KIVDSLER 420 Query: 274 NKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIE 330 ++S + ++LP + T+ DGK+ M +G++ ++ Sbjct: 421 EWQMSTVQFD----------FNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILI 470 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G +W ++P + +I + + D K+ + G + D+ ++ + Sbjct: 471 EHYGGAFPLW---LSPIQAVIIPV---NNAVEDYAIKVLNKFKNEGIRIKLDNTSSRMNA 524 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR----LTGIREDMSLEEVI 435 + P I+G + ++ K+ I+ R + GI+ D + E ++ Sbjct: 525 KIREYQAKKIPYMFIIGEREATEEKISIRTRTNEQINGIKLDEAFEFIL 573 >gi|291542490|emb|CBL15600.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus bromii L2-63] Length = 648 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 87/413 (21%), Positives = 162/413 (39%), Gaps = 52/413 (12%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ LP G + + + + + + G + P L DL+ SG +D Y M L Sbjct: 262 QGLPILLPKGARVVQLLQRWVEDVEQSKGCLLTKTPLLAKRDLYKISGHWDHYLDGMFVL 321 Query: 97 ADRND---KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 D +D + P ++ + +SYR+LP + FR+E G++R Sbjct: 322 GDPHDEEKECFALRPMTCPFQYQVYLNKQRSYRDLPMRLTETSTLFRNEASGEMHGLIRV 381 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG-LKSIPMR-AESGPIGGDLSHEF 210 R+F + + + + L P+ + + +G L++ R ++ P + +E Sbjct: 382 RQFTISEGH-YILRPDQLEQEFKGCLELAKYFLDTVGLLENCTFRFSQWDPENKNNKYEG 440 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 + E K +D + D D I ++ A Y D+ + +F Sbjct: 441 T--KEQWEESQAVMKTILD------DLDVDYEIGIDE-----AAFYGPKLDIQYKNVF-- 485 Query: 271 LPENKRVSARGIEVGHIFY--FGTKYSLPMSATFKGADGKD------HYVQMGSYGIGAM 322 K + I++ + FG Y DG+ H +G + Sbjct: 486 ---GKEDTIVTIQIDMLLAERFGMYYI--------DKDGQKKLPYIIHRTSLGCFE---- 530 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 R +A +IE G +W +AP +I L+ IK + + + I RL+ +G V D Sbjct: 531 RTLAYMIE-RFAGVMPLW---LAPEQIRLLPIKEGNV---EYAQGIADRLTSLGMRVTVD 583 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E IG + A L P +++G ++ S V ++ R G +M ++E + Sbjct: 584 SRDENIGPKIKAARLERIPYILVIGDNEMNSSTVTVRSRKRGEIPNMPVDEFV 636 >gi|254719143|ref|ZP_05180954.1| threonyl-tRNA synthetase [Brucella sp. 83/13] gi|265984137|ref|ZP_06096872.1| threonyl-tRNA synthetase [Brucella sp. 83/13] gi|306838428|ref|ZP_07471273.1| threonyl-tRNA synthetase [Brucella sp. NF 2653] gi|264662729|gb|EEZ32990.1| threonyl-tRNA synthetase [Brucella sp. 83/13] gi|306406568|gb|EFM62802.1| threonyl-tRNA synthetase [Brucella sp. NF 2653] Length = 658 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 235 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLRI 409 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 410 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 440 >gi|239831910|ref|ZP_04680239.1| threonyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] gi|239824177|gb|EEQ95745.1| threonyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] Length = 674 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 251 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 306 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL---ADRNDKAMIYG--PTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ D D ++ P + IF Sbjct: 307 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHVQIF 366 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 367 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLRI 425 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 426 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 456 >gi|255710799|ref|XP_002551683.1| KLTH0A05192p [Lachancea thermotolerans] gi|238933060|emb|CAR21241.1| KLTH0A05192p [Lachancea thermotolerans] Length = 740 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 ++ S G WLP G + +N+ ++R E + G E+ P + ++ LW SG + +Y + Sbjct: 347 FNEMSPGSCFWLPHGTRIYNNLVDLMRAEYRKRGFDEVITPNMYNSKLWETSGHWGNYKE 406 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F+S +SY+ LP+ + R+E G+ Sbjct: 407 NMFTF-EVEKETFGLKPMNCPGHCILFKSRERSYKELPWRVADFGVIHRNEFSGALTGLT 465 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 466 RVRRFQQDDAHIF 478 >gi|254569696|ref|XP_002491958.1| Threonyl-tRNA synthetase, essential cytoplasmic protein [Pichia pastoris GS115] gi|238031755|emb|CAY69678.1| Threonyl-tRNA synthetase, essential cytoplasmic protein [Pichia pastoris GS115] gi|328351547|emb|CCA37946.1| threonyl-tRNA synthetase [Pichia pastoris CBS 7435] Length = 712 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 ++ S G WLP G + + + ++R E + G E+ P + ++ LW SG + +Y + Sbjct: 322 FNEMSPGSCFWLPHGTRIYNTLTDLLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYKE 381 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F+S +SYR LP+ + R+E G+ Sbjct: 382 NMFTF-EVEKETFGLKPMNCPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLT 440 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 441 RVRRFQQDDAHIF 453 >gi|254456038|ref|ZP_05069467.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207083040|gb|EDZ60466.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 638 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 4/151 (2%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL + H + S G W G + +R Q+ G E++ P Sbjct: 238 EAEKRDHRKLGKEMDLFHFREESPGSVFWHEKGWALFQKLINYMRSRQDAAGYREVNTPE 297 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG ++ YG+ M ++K P + +F +KSYR+LP Sbjct: 298 ILDRQLWEKSGHWEKYGENMYTSETPDEKVFAIKPMNCPGHIQVFNQGLKSYRDLPIRIA 357 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + R E G++R R F DA+ F Sbjct: 358 EFGKVHRYEPSGALHGLLRVRAFTQDDAHIF 388 >gi|170287992|ref|YP_001738230.1| threonyl-tRNA synthetase [Thermotoga sp. RQ2] gi|238688803|sp|B1L7W6|SYT_THESQ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|170175495|gb|ACB08547.1| threonyl-tRNA synthetase [Thermotoga sp. RQ2] Length = 640 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 3/135 (2%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 +++ G+ +LP G L+ + RE G E+ P + + LW SG +D Y + M Sbjct: 256 EYAPGMPFFLPKGVVVLNELMKFSRELHRERGYQEIFTPLIMNEQLWKISGHWDHYAENM 315 Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 +++++ P + +++S SYR+LP F++ R E G+MR Sbjct: 316 Y-FIEKDEERYAVKPMNCPGHILVYKSRTVSYRDLPLRFFEFGRVHRYERSGVLHGLMRV 374 Query: 153 REFLMKDAYSFDLTP 167 R F DA+ F TP Sbjct: 375 RSFTQDDAHIF-CTP 388 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 7/138 (5%) Query: 299 SATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + T+ G D K+H M I G++ ++ G +P +AP ++++I I Sbjct: 491 NVTYIGPDNKEHRAVMIHRAIYGSLERFFGILIEHFAGA---FPTWLAPIQVAVIPISEK 547 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D EKI R+S+ G VF+D+ E +G + A P +I+G K + K+ Sbjct: 548 HN---DGAEKIAKRISQEGFRVFFDNRRETLGYRIRQAQTQKIPYMIILGDKELESGKIS 604 Query: 418 IKHRLTGIREDMSLEEVI 435 ++ R +D+ LE + Sbjct: 605 VRTRTGKEIKDVDLEHFV 622 >gi|304373259|ref|YP_003856468.1| Prolyl-tRNA synthetase 2 [Mycoplasma hyorhinis HUB-1] gi|304309450|gb|ADM21930.1| Prolyl-tRNA synthetase 2 [Mycoplasma hyorhinis HUB-1] Length = 480 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/157 (21%), Positives = 77/157 (49%), Gaps = 3/157 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y +S FK + S+G+ + R++ +I + D +G+ Sbjct: 221 GKALQSGTSHYLAQNFSKSFDIVFKNDKNEFENPYQTSWGV-STRLIGGLIMTHGDDRGV 279 Query: 339 IWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I P +AP ++ ++ + A + + ++I+ +L K+ + D Q G + + +++ Sbjct: 280 ILPPKIAPIQVDILELFAIKNPIVSIVTKQIFEKL-KIKFTLRIDSTDNQPGYKASRSEV 338 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 LG PL++ VG + + ++V I R T + + +E+V Sbjct: 339 LGTPLRIEVGPRDLEKNQVTIVRRDTLEKHQVEVEKV 375 >gi|254706742|ref|ZP_05168570.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261314206|ref|ZP_05953403.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261303232|gb|EEY06729.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] Length = 658 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 235 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL---ADRNDKAMIYG--PTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ D D ++ P + IF Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDCVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLRI 409 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 410 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 440 >gi|154282499|ref|XP_001542045.1| hypothetical protein HCAG_02216 [Ajellomyces capsulatus NAm1] gi|150410225|gb|EDN05613.1| hypothetical protein HCAG_02216 [Ajellomyces capsulatus NAm1] Length = 582 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 14/144 (9%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 Q+S G +LP G L+ + + +R + + G +E+ P++ LW SG + +Y +M Sbjct: 109 QYSPGSPLFLPNGTHILNKLTSFLRAQYTQYGFLEVLTPSIYKKSLWKVSGHWQNYKDDM 168 Query: 94 LRLADRN-------------DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 + RN D++ P + +F+S SYR LP + R Sbjct: 169 YEVRGRNATGEQTAETQIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHR 228 Query: 141 DELRPRF-GVMRSREFLMKDAYSF 163 +E+ G+ R R F D + F Sbjct: 229 NEISGSLSGLTRVRRFHQDDGHIF 252 >gi|148269334|ref|YP_001243794.1| threonyl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|166225512|sp|A5IJ45|SYT_THEP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|147734878|gb|ABQ46218.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thermotoga petrophila RKU-1] Length = 640 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 3/136 (2%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 +++ G+ +LP G L+ + RE G E+ P + + LW SG +D Y + M Sbjct: 256 EYAPGMPFFLPKGVVVLNELMRFSRELHRERGYQEIFTPLIMNEQLWKISGHWDHYAENM 315 Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 +++++ P + +++S SYR+LP F++ R E G+MR Sbjct: 316 Y-FIEKDEERYAVKPMNCPGHILVYKSRTVSYRDLPLRFFEFGRVHRYERSGVLHGLMRV 374 Query: 153 REFLMKDAYSFDLTPE 168 R F DA+ F TP+ Sbjct: 375 RSFTQDDAHIF-CTPD 389 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 7/138 (5%) Query: 299 SATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + T+ G D K+H M I G++ ++ G +P +AP ++++I I Sbjct: 491 NVTYIGPDNKEHRAVMIHRAIYGSLERFFGILIEHFAGA---FPTWLAPIQVAVIPISEK 547 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D EKI R+S+ G VF+D+ E +G + A P +I+G K + K+ Sbjct: 548 HN---DGAEKIAKRISQEGFRVFFDNRRETLGYRIRQAQTQKIPYMIILGDKELESGKIS 604 Query: 418 IKHRLTGIREDMSLEEVI 435 ++ R +D+ LE + Sbjct: 605 VRTRTGKEIKDVDLEHFV 622 >gi|312218414|emb|CBX98360.1| similar to threonyl-tRNA synthetase [Leptosphaeria maculans] Length = 784 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G +LP GQ + + A +REE G E+ P + ++ LW SG + Y + Sbjct: 341 HEFSPGSCFFLPHGQIIYNTLQAFLREEYWNRGYQEVGSPNMYNSALWKISGHWQHYADD 400 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +K + P + IF+ +SYR LP + R+E G+ R Sbjct: 401 MFTFDVEKEKWAL-KPMNCPGHCLIFKHRERSYRELPIRMADFGILHRNEASGALTGLTR 459 Query: 152 SREFLMKDAYSF 163 R F D + F Sbjct: 460 VRRFQQDDTHVF 471 >gi|148560208|ref|YP_001259002.1| threonyl-tRNA synthetase [Brucella ovis ATCC 25840] gi|148371465|gb|ABQ61444.1| threonyl-tRNA synthetase [Brucella ovis ATCC 25840] Length = 693 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 270 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 325 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 326 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 385 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 386 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLRI 444 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 445 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 475 >gi|118602649|ref|YP_903864.1| threonyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166225495|sp|A1AWT6|SYT_RUTMC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118567588|gb|ABL02393.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 632 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 14/180 (7%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GMI H+KG W L Q + I ++ + E+ P L LW +SG ++ + Sbjct: 261 GMIFWHAKG---W-TLCQLIEQYMRGIFKDNDYQ----EVHTPQLIDKSLWEKSGHWEKF 312 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 G M + N + P + I+ +KSYR+LP + R+E G Sbjct: 313 GDTMFTTSSENRDYAV-KPMNCPAHIQIYNQGLKSYRDLPLRLAEFGSCHRNEPSGTLHG 371 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 +MR R F+ D + F TPE + + ++ G + ++ + P +G D Sbjct: 372 IMRVRNFVQDDGHIF-CTPEQIQVEVSTFIDLTFAVYKHFGFDKVDIKLSTRPENHVGSD 430 >gi|327393701|dbj|BAK11123.1| Threonyl-tRNA synthetase ThrS [Pantoea ananatis AJ13355] Length = 642 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 82/398 (20%), Positives = 144/398 (36%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N ++ G + I ++ + P IG D + Sbjct: 375 RVRGFTQDDAHIF-CTEDQLRTEVNSCIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 + D ++ N+I ++ A E Sbjct: 434 WD------------------------RAEEDLAAALNENNIEFEYQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L+D L R + G + +SLP + AT+ G + M I G+M Sbjct: 470 LYDCLD-------RAWQCGTV---QLDFSLPKRLDATYVGENNDRQTPVMIHRAILGSME 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +P +AP + ++NI + E + +L G V D Sbjct: 520 RFIGILTEEFAG---FFPSWLAPMQAVVMNITDGQA---EYVETLTRKLQNAGIRVKADL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 574 RNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 611 >gi|306843943|ref|ZP_07476538.1| threonyl-tRNA synthetase [Brucella sp. BO1] gi|306275698|gb|EFM57422.1| threonyl-tRNA synthetase [Brucella sp. BO1] Length = 658 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 235 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLRI 409 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 410 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 440 >gi|257452295|ref|ZP_05617594.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|317058838|ref|ZP_07923323.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313684514|gb|EFS21349.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] Length = 637 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 96/454 (21%), Positives = 178/454 (39%), Gaps = 86/454 (18%) Query: 5 KYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K FL +++E AE H+ + L + ++ G +LP G + + + R E Sbjct: 228 KDFLRLMEE----AEKRDHRKLGKELELFFLSEYGPGFPFFLPKGMVLRNTLIDLWRAEH 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G +++ P + + +LW SG + +Y +E + + +D P + F+ Sbjct: 284 EKAGYVQIDTPIMLNRELWEISGHWFNY-RENMYTSSIDDVDFAIKPMNCPGGVLAFKYQ 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHS------- 173 SYR+LP ++ R E G+ R R F D++ F +T E + Sbjct: 343 QHSYRDLPARVAELGKVHRHEFSGALHGLFRVRAFTQDDSHIF-MTEEQIESEIIGVVNL 401 Query: 174 ----YNKMF-VSY-----LRIFHRLGLKSIPMRAESGPIGGDLSH---EFIVLADTGETQ 220 Y+K+F Y R +G I +AE+ + G L+H EF + + G+ Sbjct: 402 IDKFYSKLFGFQYSIELSTRPEKSIGTDEIWEKAETA-LAGALNHLGREFKI--NEGDGA 458 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 + K +DF I ++I W +L +LPE Sbjct: 459 FYGPK--LDFKIK------------DAIGRTWQCGTI--------QLDFNLPER------ 490 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGII 339 T+ G DG+ H V + G++ ++ + G + Sbjct: 491 -----------------FDVTYIGEDGEKHRPVMIHRVIYGSIERFIGILIEHYAGAFPM 533 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LL 398 W +AP ++ ++ I + C +++ A+L + G DD E IG + A+ Sbjct: 534 W---LAPVQVKVLTI---NDECAPYAKEVVAQLKEQGIRAELDDRSESIGYKIREANGRY 587 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 P+QVI+G + +V ++ + +E M L+ Sbjct: 588 KIPMQVIIGKNEIEKREVNVRRFGSQAQESMELD 621 >gi|23501949|ref|NP_698076.1| threonyl-tRNA synthetase [Brucella suis 1330] gi|161619021|ref|YP_001592908.1| threonyl-tRNA synthetase [Brucella canis ATCC 23365] gi|163843337|ref|YP_001627741.1| threonyl-tRNA synthetase [Brucella suis ATCC 23445] gi|254704361|ref|ZP_05166189.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|254710151|ref|ZP_05171962.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|254714150|ref|ZP_05175961.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1] gi|254716792|ref|ZP_05178603.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1] gi|256031646|ref|ZP_05445260.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|256061156|ref|ZP_05451310.1| threonyl-tRNA synthetase [Brucella neotomae 5K33] gi|256369496|ref|YP_003107004.1| threonyl-tRNA synthetase [Brucella microti CCM 4915] gi|260168776|ref|ZP_05755587.1| threonyl-tRNA synthetase [Brucella sp. F5/99] gi|260566393|ref|ZP_05836863.1| threonyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261218590|ref|ZP_05932871.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261317705|ref|ZP_05956902.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261321913|ref|ZP_05961110.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261325162|ref|ZP_05964359.1| threonyl-tRNA synthetase [Brucella neotomae 5K33] gi|261755033|ref|ZP_05998742.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|261758257|ref|ZP_06001966.1| threonyl-tRNA synthetase [Brucella sp. F5/99] gi|265988738|ref|ZP_06101295.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|38258386|sp|Q8G0L8|SYT_BRUSU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083599|sp|A9M582|SYT_BRUC2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083600|sp|B0CGM0|SYT_BRUSI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|23347895|gb|AAN29991.1| threonyl-tRNA synthetase [Brucella suis 1330] gi|161335832|gb|ABX62137.1| threonyl-tRNA synthetase [Brucella canis ATCC 23365] gi|163674060|gb|ABY38171.1| threonyl-tRNA synthetase [Brucella suis ATCC 23445] gi|255999656|gb|ACU48055.1| threonyl-tRNA synthetase [Brucella microti CCM 4915] gi|260155911|gb|EEW90991.1| threonyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|260923679|gb|EEX90247.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261294603|gb|EEX98099.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261296928|gb|EEY00425.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261301142|gb|EEY04639.1| threonyl-tRNA synthetase [Brucella neotomae 5K33] gi|261738241|gb|EEY26237.1| threonyl-tRNA synthetase [Brucella sp. F5/99] gi|261744786|gb|EEY32712.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|264660935|gb|EEZ31196.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] Length = 658 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 235 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLRI 409 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 410 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 440 >gi|306841798|ref|ZP_07474483.1| threonyl-tRNA synthetase [Brucella sp. BO2] gi|306288128|gb|EFM59518.1| threonyl-tRNA synthetase [Brucella sp. BO2] Length = 661 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 238 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 293 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 294 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 353 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 354 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLRI 412 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 413 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 443 >gi|213156053|ref|YP_002318098.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|301346223|ref|ZP_07226964.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB056] gi|301596041|ref|ZP_07241049.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB059] gi|226701414|sp|B7I688|SYT_ACIB5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|213055213|gb|ACJ40115.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB0057] Length = 640 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 81/415 (19%), Positives = 155/415 (37%), Gaps = 54/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R+ Q G E+ P + LW +SG +Y + Sbjct: 255 MQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYVE 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +KSYR+LP + R+E G+M Sbjct: 315 NMFTTHSESRNYAV-KPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E L ++ G + + M+ + P +G D Sbjct: 374 RVRGFTQDDAHIF-CTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDD-- 430 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 L D E K D +L++ +W + K+ Sbjct: 431 ----ALWDLAE------KSLAD--------------ALDAAGLEWEL-QPGEGAFYGPKI 465 Query: 268 FDSLPENKRVSARGIEVGHIFYFGT---KYSLPM---SATFKGADGKDHYVQMGSYGIGA 321 SL + +G ++ GT ++LP+ ++ + +D V + +G+ Sbjct: 466 EFSLKDC---------LGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGS 516 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 ++ + G P ++P + ++NI +A E++ A+L + G Sbjct: 517 FERFIGILIEHYAG---FMPPWLSPVQACVMNITDSQA---EASEQVVAKLKENGLRAIS 570 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E+IG + L P +++G + V + V ++ R MS++ I+ Sbjct: 571 DLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFID 625 >gi|225627544|ref|ZP_03785581.1| threonyl-tRNA synthetase [Brucella ceti str. Cudo] gi|225617549|gb|EEH14594.1| threonyl-tRNA synthetase [Brucella ceti str. Cudo] Length = 693 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 270 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 325 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 326 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 385 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 386 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLRI 444 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 445 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 475 >gi|163814284|ref|ZP_02205673.1| hypothetical protein COPEUT_00435 [Coprococcus eutactus ATCC 27759] gi|158449919|gb|EDP26914.1| hypothetical protein COPEUT_00435 [Coprococcus eutactus ATCC 27759] Length = 587 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 79/405 (19%), Positives = 150/405 (37%), Gaps = 60/405 (14%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ +LP G + I+ ++ + G + + P + + +L+ SG +D Y M Sbjct: 201 GRGLPMFLPKGYTVWQELENYIKRKERKLGYLHVMTPCVGTVNLYKTSGHWDHYKDNMFP 260 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + ++ + P + I+ + + SY++LP +I FR E G+ R R Sbjct: 261 AMEMEGESFVLRPMNCPHHMMIYANKMHSYKDLPIRIAEIAHDFRFEASGTLKGIERGRH 320 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F D++ F +TP+ + + G + F Sbjct: 321 FCQNDSHIF-VTPDQIEEEF----------------------------AGVVKLIFDTYK 351 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D G T C D P + + D E W A V ++ D E Sbjct: 352 DFGITDYRCVLSLRD---PEDKVKYHDDD------EMWNKAENALRRVLDDIGIDYTEEI 402 Query: 275 KRVSARGIE--------VGHIFYFGT---KYSLPMSATFKGADG---KDHYVQMGSYGIG 320 + G + VG+ + T + LP K D K V + +G Sbjct: 403 GEAAFYGPKLDVNVKPAVGNEYTLSTCQLDFCLPAKFDLKYIDKDGEKKTPVVLHRAILG 462 Query: 321 AM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 ++ R +A ++E + KG + P +AP ++ ++ +K ++ K+ L + V Sbjct: 463 SLDRFMAYILEET---KGNL-PTWLAPVQVRVMPVKTDNEDLMAYAHKVVDALDAIDVRV 518 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 DD E++G + + P +++G F + +RL G Sbjct: 519 ELDDRAEKLGYRMREGQVQKVPYLLVIG--FNEAENGTVSYRLHG 561 >gi|266623074|ref|ZP_06116009.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288865169|gb|EFC97467.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 691 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 3/128 (2%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G K + + I +E+ + G + P + DL+V S +D Y + M L Sbjct: 301 QGLPLLMPKGAKIIQTLQRWIEDEEEKRGYMRTKTPLMAKKDLYVISDHWDHYKEGMFVL 360 Query: 97 AD--RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D ++D+ P +++ KSYR+LP + + FR+E G+ R R Sbjct: 361 GDEEKDDEVFALRPMTCPFQYYVYKQSPKSYRDLPCRYGETSTLFRNEDSGEMHGLTRVR 420 Query: 154 EFLMKDAY 161 +F + + + Sbjct: 421 QFTISEGH 428 Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 11/130 (8%) Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 H MG Y R +A +IE ++G W + P ++ ++ I + D EK+ Sbjct: 559 HRTSMGCY----ERTLAWLIEK-YEGAFPTW---LCPEQVRVLPIS---EKYHDYAEKVE 607 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 + L G D+ E+IG + A L P ++VG K D V ++ R G Sbjct: 608 SELKSNGILATVDERAEKIGYKIREARLAKLPYMLVVGQKEEEDGLVSVRSRFNGDEGQK 667 Query: 430 SLEEVINYAS 439 SL + I+ S Sbjct: 668 SLSDFIDAIS 677 >gi|47575750|ref|NP_001001219.1| threonyl-tRNA synthetase [Xenopus (Silurana) tropicalis] gi|301626626|ref|XP_002942489.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Xenopus (Silurana) tropicalis] gi|45709710|gb|AAH67949.1| threonyl-tRNA synthetase-like 2 [Xenopus (Silurana) tropicalis] Length = 721 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 83/415 (20%), Positives = 164/415 (39%), Gaps = 57/415 (13%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G +LP G + + A IR+E + G E+ P + ++ LW SG + Y + Sbjct: 334 HELSPGSCFFLPKGAYIYNQLIAFIRQEYRKRGFQEVVTPNVYNSKLWQTSGHWQHYSEN 393 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + +F +S+R LP + R+EL G+ R Sbjct: 394 MFSF-EVEKEIFALKPMNCPGHCLMFDHRPRSWRELPLRMADFGVLHRNELSGALTGLTR 452 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSHE 209 R F DA+ F + + K + +LR + + + + + P GD Sbjct: 453 VRRFQQDDAHIFCAMEQIEEEI--KSCLDFLRAVYNVFGFTFKLNLSTRPEKFLGD---- 506 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDVH 263 I + + E Q+ EN SLN E+W A Y D+ Sbjct: 507 -IEVWNQAEKQL-------------EN-------SLNEFGEKWVLNPGDGAFYGPKIDI- 544 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGA 321 ++ D++ + + ++ F +++L T+ DG D V + +G+ Sbjct: 545 --QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIIHRAILGS 594 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + + A++ + GK WP ++P ++ ++ + C + +++ + + G Sbjct: 595 VERMIAILTENFGGK---WPLWLSPQQVMVVPVGP---TCDEYAQQVREQFHRAGLMTDV 648 Query: 382 D-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + +++G K + V I+ R + + ++ E I Sbjct: 649 DLDPGCTLNKKIRNAQLAQYNFILVIGEKEKASGTVNIRTRDNKVHGERTIAETI 703 >gi|89071308|ref|ZP_01158467.1| threonyl-tRNA synthetase [Oceanicola granulosus HTCC2516] gi|89043173|gb|EAR49409.1| threonyl-tRNA synthetase [Oceanicola granulosus HTCC2516] Length = 654 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 12/190 (6%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G W P G + +R +Q G E++ P + LW SG +D Y Sbjct: 264 MQAEAPGQVFWHPNGWTVYTTLQDYMRRKQRAGGYREINTPQVVDRKLWEASGHWDKYQD 323 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + + A P + +F +KSYR+LP + R E Sbjct: 324 HMFIVEVDEEHAQEKAINALKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCSRYEPSGA 383 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP--- 201 G+MR R F DA+ F E + F+++L I+ LG + ++ + P Sbjct: 384 LHGIMRVRGFTQDDAHIF--CTEDQIEAECARFINFLAGIYEDLGFPTFEIKFATRPEKR 441 Query: 202 IGGDLSHEFI 211 +G D S + + Sbjct: 442 VGSDASWDHV 451 >gi|332284530|ref|YP_004416441.1| threonyl-tRNA synthetase [Pusillimonas sp. T7-7] gi|330428483|gb|AEC19817.1| threonyl-tRNA synthetase [Pusillimonas sp. T7-7] Length = 648 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 13/163 (7%) Query: 7 FLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W P G V +R Sbjct: 236 YLTMLEE----AERRDHRKIGRELDLFHFQDEAPGLIFWHPKGWTLWQQVEQYMRSVYRD 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSH 121 G E+ P + LW ++G +D+Y + M N +YG P + IF + Sbjct: 292 NGYQEVKAPQILDLSLWKKTGHWDNYAENMFTTESEN---RVYGLKPMNCPGHVQIFNAG 348 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + SYR LP + + R+E G+MR R F D + F Sbjct: 349 LHSYRELPIRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIF 391 >gi|313681237|ref|YP_004058975.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] gi|313154097|gb|ADR32775.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] Length = 602 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G WLP G + + ++ + + G + P + +DLW SG Y +YG+ M Sbjct: 228 GFPIWLPAGARMRSRLEQLLFKAHRKRGYEPVRGPEMLRSDLWKVSGHYQNYGENMY-FT 286 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + ++ + SYR+LP +++ + R E+ G+ R REF Sbjct: 287 HIDELEFGVKPMNCVGHIKVYEHDLHSYRDLPLKYFEYGVVHRHEMTGALHGLFRVREFT 346 Query: 157 MKDAYSF 163 DA+ F Sbjct: 347 QDDAHIF 353 >gi|57234472|ref|YP_181487.1| threonyl-tRNA synthetase [Dehalococcoides ethenogenes 195] gi|123759710|sp|Q3Z8G2|SYT_DEHE1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|57224920|gb|AAW39977.1| threonyl-tRNA synthetase [Dehalococcoides ethenogenes 195] Length = 582 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 97/430 (22%), Positives = 164/430 (38%), Gaps = 63/430 (14%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +L +L+E+ RD +L L + +HQ G+ +WLP G + ++E + Sbjct: 174 YLNMLEESAKRDHRKLGKELELFS--LHQEIGGGLVNWLPNGAIVRHLIEEFWKKEHLKR 231 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + DLW SG + Y + M D + + + P + +F++ +S Sbjct: 232 GYSLVYTPHIAKVDLWKTSGHWGFYRENMYSPMDIDGEEYVLKPMNCVYHILMFKNRTRS 291 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVM----RSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 Y+ LP ++ +R E R GV+ R R F DA+ F L + K + ++ Sbjct: 292 YKELPIRMAELGTVYRYE---RSGVLHGLSRVRGFTQDDAHIFCLYEQLEKEVVKVLDLA 348 Query: 181 YLRIFHRLGLKSIPMRAESGP---IGGDLSHEFI--VLADTGET-QVFCSKDFMD--FPI 232 I G + + P +G E+ +LA E+ Q+ D + F Sbjct: 349 KFMI-DTFGFTRYKVMLSTRPEKYVGELDKWEYATDILAKALESNQIAYQVDPGEGVFYG 407 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 P + F+D + W P T V + LPE VS G Sbjct: 408 PKIDIKFEDALG-----RAWQGP---TIQVDFQ-----LPERFDVSVVG----------- 443 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 DGKD V M + G+M + + + G +W ++P ++ L Sbjct: 444 ------------EDGKDQPVAMVHRTVLGSMERFMSCLTEQYGGAFPVW---LSPKQVML 488 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 I I + EK+ L + V D+ E + + A L P ++VG K + Sbjct: 489 IPIADRHS---EFAEKLACELREEEVRVEVDNRSETMNQKIRQAQLAKIPYMLVVGDKEI 545 Query: 412 SDSKVEIKHR 421 V I+ R Sbjct: 546 ETQSVSIRTR 555 >gi|148909063|gb|ABR17634.1| unknown [Picea sitchensis] Length = 682 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 1/129 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G N+ + + G + P + ADLW SG + Y + M Sbjct: 306 GLVFWHPRGAIIRQNIEDFWKRTHIQHGYELLYTPHVDKADLWKISGHLEFYKENMFNQM 365 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D D+ P + +++ ++SYR+LPF ++ +R E+ G+ R R F Sbjct: 366 DIEDELYQLRPMNCPYHILVYKHSLRSYRDLPFKVAELGTVYRYEMSGSLHGLFRVRGFT 425 Query: 157 MKDAYSFDL 165 DA+ F L Sbjct: 426 QDDAHIFCL 434 >gi|170290849|ref|YP_001737665.1| glycyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174929|gb|ACB07982.1| glycyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 508 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 75/323 (23%), Positives = 133/323 (41%), Gaps = 34/323 (10%) Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM---FVSY-L 182 LPF Q+ FR+E+ PR ++R REF + F PE Y + F+ Y L Sbjct: 188 KLPFALGQVGRVFRNEISPRRALIRMREFQQLEVQIF-FDPENPDELYREKLEPFLDYKL 246 Query: 183 RIFHRLGLKS---IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 R R +S + + A + G + I + F + + FP+ Sbjct: 247 RFLRREDRESGRIVEIPAREALMSGYTVNSLITYWLVAYQRFF--NETLGFPL------- 297 Query: 240 DDIISLNSIVEQWTAPYAATS---DVHNEKL-FDSLPENKRVSARGIEVGHIFYFGTKYS 295 + + +VE A Y+ +V+ E L + L N + + GH+ G Sbjct: 298 -ERLRYRELVEGEKAHYSLVHWDLEVYTEDLGWIELVNNAYRTDYDLS-GHMRVSGIDLR 355 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVA-AVIESSHDGKGIIW---PDSVAPFKISL 351 + + + + M IG RV+ ++ + + + +W P S+AP ++ + Sbjct: 356 IAIPES-----DRKLLPHMYEPSIGVDRVILHELMLAYREDEERVWLQLPRSIAPIEVGV 410 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + D++ A E IY L G F+DD G IG ++ D +G PL V + + + Sbjct: 411 FPLLKRDELPSKARE-IYHELINEGIIAFYDDSG-TIGRRYRRMDEIGTPLCVTIDYQTL 468 Query: 412 SDSKVEIKHRLTGIREDMSLEEV 434 D V ++ R T ++ + EE+ Sbjct: 469 EDDTVTLRDRDTMMQVRVRREEL 491 >gi|257463827|ref|ZP_05628214.1| threonyl-tRNA synthetase [Fusobacterium sp. D12] gi|317061364|ref|ZP_07925849.1| threonyl-tRNA synthetase [Fusobacterium sp. D12] gi|313687040|gb|EFS23875.1| threonyl-tRNA synthetase [Fusobacterium sp. D12] Length = 637 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 97/452 (21%), Positives = 173/452 (38%), Gaps = 84/452 (18%) Query: 5 KYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K FL +++E AE H+ + L + ++ G +LP G + + + R E Sbjct: 228 KDFLKLMEE----AEKRDHRKLGKELELFFLSEYGPGFPFFLPKGMVLRNTLIDLWRAEH 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G +++ P + + +LW SG + +Y +E + + +D P + F+ Sbjct: 284 EKAGYVQIDTPIMLNRELWEISGHWFNY-RENMYTSSIDDVDFAIKPMNCPGGVLAFKYQ 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHS------- 173 SYR+LP ++ R E G+ R R F D++ F +T E + Sbjct: 343 QHSYRDLPARVAELGKVHRHEFSGALHGLFRVRAFTQDDSHIF-MTEEQIESEIIGVVNL 401 Query: 174 ----YNKMF-VSY-----LRIFHRLGLKSIPMRAESGPIGG--DLSHEFIVLADTGETQV 221 Y+K+F Y R +G I +AE+ G L EF + + G+ Sbjct: 402 IDKFYSKLFGFQYSIELSTRPEKSIGTDEIWEKAEAALAGALHHLGREFKI--NEGDGAF 459 Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARG 281 + K +DF I ++I W +L +LPE Sbjct: 460 YGPK--LDFKIK------------DAIGRTWQCGTI--------QLDFNLPER------- 490 Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 T+ G DG+ H V + G++ ++ + G +W Sbjct: 491 ----------------FDVTYVGEDGEKHRPVMIHRVIYGSIERFIGILIEHYAGAFPMW 534 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLG 399 +AP +I ++ I + C ++I +L + G DD E IG + A+ Sbjct: 535 ---LAPVQIKVLTI---NDDCVSYAKEIVEKLKEQGIRAELDDRSESIGYKIREANGRYK 588 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 P+QVI+G + +V I+ + +E M L Sbjct: 589 IPMQVIIGKNEIEKKEVNIRRFGSQAQESMDL 620 >gi|119774900|ref|YP_927640.1| threonyl-tRNA synthetase [Shewanella amazonensis SB2B] gi|166225496|sp|A1S6G4|SYT_SHEAM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119767400|gb|ABL99970.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella amazonensis SB2B] Length = 642 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR + + E+ P + LW SG +D Y Sbjct: 256 MQEEAPGMVFWHNDGWSIFRELETFIRHKLSEYDYQEVKGPFMMDRVLWERSGHWDKYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M A N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTASENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E + + + G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVQEEVSACIRMVYDTYSTFGFENIVVKLSTRPEKRIGDD 431 >gi|57506155|ref|ZP_00372076.1| threonyl-tRNA synthetase [Campylobacter upsaliensis RM3195] gi|57015550|gb|EAL52343.1| threonyl-tRNA synthetase [Campylobacter upsaliensis RM3195] Length = 602 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 94/443 (21%), Positives = 183/443 (41%), Gaps = 43/443 (9%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD +L L T Q G+ WL G + + ++ + Sbjct: 195 KEYLHIIEEARKRDHRKLGSELKLFT-FDEQIGGGLPIWLSNGTRLRSKLEQMLYKIHRL 253 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L A+ W SG Y +Y KE + + +++ P + I+++ ++ Sbjct: 254 RGYEPVRGPELLKAEAWKISGHYANY-KENMYFTNIDEQEYGIKPMNCVGHIKIYQNDVR 312 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM-FV-S 180 SYR+LP F++ + R E G+ R REF DA+ F + + + + FV S Sbjct: 313 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILDFVAS 372 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++IF I R E IG + E A K+ +D + + Sbjct: 373 LMKIFDFEYEMEISTRPEKA-IGDEAIWEVATKA---------LKEALD----EQGLKY- 417 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I E A Y D+ K+ D+L ++ I+V F +++L + Sbjct: 418 ------GIDEGGGAFYGPKIDI---KITDAL--KRKWQCGTIQVD--FNLPERFALEYTT 464 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + K+ V + +G+ ++ G+ +P +AP ++ ++ I +V Sbjct: 465 S---ENTKERPVMLHRAILGSFERFIGILTEHCAGE---FPFFIAPIQVGIVPI---SEV 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + I L ++G D D E + + A+ P+ +++G + +S+ V ++ Sbjct: 516 HLAYAKGIQRTLLEMGVDSEIYDKNESLSKKIRNAEKQKLPMILVIGDEELSNRAVALRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R ++ +SL+E +N + + Sbjct: 576 RRAKEQKSLSLDEFMNLIKEKIN 598 >gi|219685509|ref|ZP_03540326.1| threonine--tRNA ligase [Borrelia garinii Far04] gi|219672908|gb|EED29930.1| threonine--tRNA ligase [Borrelia garinii Far04] Length = 581 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 77/409 (18%), Positives = 157/409 (38%), Gaps = 51/409 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG D Y M Sbjct: 205 GLIFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHVGKSWLWQTSGHLDFYKDSMFEKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 265 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGMMRARGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ T ++ + ++ + G S+ + P +G D E + Sbjct: 325 QDDAHII-CTHSQVVDEIKEVLRFAIYMWSKFGFSSLKAYLSTKPDKSVGNDYDWEMSLK 383 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + +F +P E I + A Y D+ K+ DSL Sbjct: 384 V--------LEEALSNFEVPYE------------IDKGGGAFYGPKIDL---KIVDSLER 420 Query: 274 NKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIE 330 ++S + ++LP + T+ DGK+ M +G++ ++ Sbjct: 421 EWQMSTIQFD----------FNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILV 470 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G +W ++P + +I + + D K+ + G + D+ ++ + Sbjct: 471 EHYGGAFPLW---LSPVQAVIIPV---NNTVEDYTIKVLNKFKNAGIRIKLDNSSSRMNA 524 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR----LTGIREDMSLEEVI 435 + P I+G + + K+ I+ R ++GI D +L+ ++ Sbjct: 525 KIREYQAKKIPYMFIIGEREAIEEKISIRTRTNEQISGIELDEALKLIL 573 >gi|84391304|ref|ZP_00991635.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01] gi|84376593|gb|EAP93471.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01] Length = 460 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G + IR++ E+ P + LW SG +D Y + Sbjct: 257 MQQEAPGMVFWHHNGWTIFRELEVFIRQKLTEYDYQEVKGPLMMDRVLWERSGHWDKYAE 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 317 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 375 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 376 RVRGFTQDDAHVF 388 >gi|187250976|ref|YP_001875458.1| threonyl-tRNA synthetase [Elusimicrobium minutum Pei191] gi|186971136|gb|ACC98121.1| Threonyl-tRNA synthetase [Elusimicrobium minutum Pei191] Length = 583 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 80/400 (20%), Positives = 155/400 (38%), Gaps = 46/400 (11%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA 103 P G V IR+E + G + P + LW +SG + Y + M + + +D+ Sbjct: 205 PKGGMLRKVVEDWIRDENIKHGYDLVYSPHIARLHLWQKSGHANFYSENMFQPIEVDDQQ 264 Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYS 162 P + I+ SH++SYR+LP ++ +R E G++R R F DA+ Sbjct: 265 YQLKPMNCPFHIAIYESHLRSYRDLPVRLAELGTVYRYERSGVVHGLLRVRGFTQDDAHI 324 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRA----ESGP---IGGDLSHEFIVLAD 215 F TPE F + + G + + E+ P GG D Sbjct: 325 F-CTPEQMNGEIEDCFNFAMLVMKTFGFEKFSVELSTWDETKPENYTGGK--------KD 375 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 E Q + ++ + N F ++ A Y D+ K+ D++ Sbjct: 376 WEEAQ-----NALESVLKKNNVPF-------TVHAGEAAFYGPKIDI---KVMDAIGRYW 420 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ++S + F +Y P +G+ + + +G++ V+ + G Sbjct: 421 QLSTIQFDFNLPQKFELEYVSP--------EGRKRPLMVHRALLGSIERFLGVLIEHYAG 472 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 +W +AP ++ L+ + DQ D + + ++ G D E++G + A Sbjct: 473 LFPLW---LAPVQVKLLTL-TDDQF--DFAKDVVKQMKLAGLRAELDSRPEKLGLKIREA 526 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + P +++G+K + + ++ R E +S+ +VI Sbjct: 527 HVEKIPYSIVIGAKEAENKTLTLRLRSGKNVEGLSVGDVI 566 >gi|126650283|ref|ZP_01722511.1| threonyl-tRNA synthetase [Bacillus sp. B14905] gi|126592933|gb|EAZ86915.1| threonyl-tRNA synthetase [Bacillus sp. B14905] Length = 637 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 82/409 (20%), Positives = 166/409 (40%), Gaps = 44/409 (10%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE +H+ + L M + + G+ +L GQ + + + +R Q + E+ P Sbjct: 239 EAEKRNHRKLGKELSLFMFSEEAPGMPFYLANGQILRNELESYLRNLQAKYDYREVRTPL 298 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + + LW +SG +D Y K+ + +D++ P + IF++ + SYR+LP Sbjct: 299 MMNQRLWEQSGHWDHY-KDNMYFTQVDDQSFALKPMNCPGHMLIFKNSLHSYRDLPIRMA 357 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK- 191 + R E G++R R F DA+ F TP+ ++ +++ G + Sbjct: 358 EFGQVHRHEFSGALNGLLRVRSFCQDDAHIF-ATPQQIENEIALALKIIDEVYNVFGFQY 416 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 S+ + G+LS L D E + ++ + + D+ +I E Sbjct: 417 SVELSTRPDDYMGELS-----LWDQAE-------EALENVLTNLGIDY-------TINEG 457 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D+H + D++ + + + ++ F K+ L + K Sbjct: 458 DGAFYGPKIDIH---IKDAIQRSHQCATVQLD----FQLPEKFDL---TYINEHNEKVRP 507 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYA 370 V + G++ ++ G IW +AP ++ +I + AH +D +++ Sbjct: 508 VVIHRAVFGSIDRFLGILIEHFGGAFPIW---LAPQQVQVIAVADAH----QDYAKQVVK 560 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 L V DD E++G + A L P +++G + + V ++ Sbjct: 561 ALQHEQIRVQLDDRQEKLGKKIREAQLHKIPYILVIGDRETAHQNVSVR 609 >gi|325917697|ref|ZP_08179888.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] gi|325536091|gb|EGD07896.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] Length = 634 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 76/394 (19%), Positives = 141/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 256 LQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 316 AMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F L + + L ++ G I ++ P +G D + Sbjct: 375 RVRGFTQDDGHVFCLESQ-IEAEVTAFHQQALAVYTAFGFDDIEIKIALRPEKRLGDDGT 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A V C ++ + P A Y + H L Sbjct: 434 WDKAEAALRTALGV-CGVEWQELPGEG-------------------AFYGPKIEYH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 471 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G +P +AP ++ + NI D + + L+ G V D E+ Sbjct: 524 ILIEHHAGA---FPSWLAPVQVVVANIT---DAQADYVDSVRKTLANQGFRVNADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++VG + + V ++ R Sbjct: 578 IGYKIREHTLQRVPYLLVVGDREKENGAVAVRTR 611 >gi|302682704|ref|XP_003031033.1| hypothetical protein SCHCODRAFT_77271 [Schizophyllum commune H4-8] gi|300104725|gb|EFI96130.1| hypothetical protein SCHCODRAFT_77271 [Schizophyllum commune H4-8] Length = 728 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + + ++R E + G E+ P + +A LW SG +++Y + Sbjct: 337 HDLSPGSCFFLPHGTRIYNTLIELMRSEYFKRGYQEVISPNMYNAKLWETSGHWENYKDD 396 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M L D + P + IF S +SYR LP + + R+E G+ R Sbjct: 397 MFTLDIEKDNWAL-KPMNCPGHCLIFDSRDRSYRELPIRMAEFGIIHRNEASGALSGLTR 455 Query: 152 SREFLMKDAYSF 163 R F+ D + F Sbjct: 456 VRRFVQDDTHIF 467 >gi|117164481|emb|CAJ88027.1| putative threonyl tRNA synthetase [Streptomyces ambofaciens ATCC 23877] Length = 411 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G ++ IR + R G + P L +L+ SG + Y +M Sbjct: 26 GLPYWLPDGAAVRYSLEEYIRAAERRAGYRHVYSPVLGKRELYEISGHWAHYSDDMFPPM 85 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + ++ P+ I+RS SYR LP ++ +R EL G+ R R Sbjct: 86 DLGGEQVVLRPSLCPHHAVIYRSRSHSYRELPLRMAELGGMYRSELSGVLGGLTRVRAIQ 145 Query: 157 MKDAYSF 163 + DA+ F Sbjct: 146 LNDAHIF 152 >gi|49474171|ref|YP_032213.1| threonyl-tRNA synthetase [Bartonella quintana str. Toulouse] gi|73919771|sp|Q6FZZ7|SYT_BARQU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|49239675|emb|CAF26046.1| Threonyl-tRNA synthetase [Bartonella quintana str. Toulouse] Length = 658 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 99/447 (22%), Positives = 175/447 (39%), Gaps = 55/447 (12%) Query: 5 KYFLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H+ + R + H + G+ W G K N+ + +R Sbjct: 233 KAYLHMLEE----AEKRDHRRLGREMDLFHFQEDGPGMIFWHQKGWKMFQNLISYMRRRL 288 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR----LADRNDKAMIYG--PTHEEVMT 115 + E++ P + LW SG + Y + M + + D +DK IY P + Sbjct: 289 DDHQYSEVNAPQVLDKSLWELSGHWGWYKENMFKAIPAIEDWDDKC-IYALKPMNCPGHV 347 Query: 116 DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSY 174 IF+ +KSYR+LP + + R E G+MR R F DA+ F + + Sbjct: 348 QIFKHSLKSYRDLPVRLAEFGVVHRYEPSGALHGLMRVRSFTQDDAHIFCTDEQLADECL 407 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 N + L + G K I ++ + P +G D L D E + M+ Sbjct: 408 N-INDLILSTYADFGFKEISLKLSTRPEKRVGSD------SLWDHAE-------NIMESV 453 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 + + T F I SI+ A Y + L D++ + ++ Sbjct: 454 LKTIETKFAGQIK-TSILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVD-------- 501 Query: 292 TKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 ++LP A + D + M I G+M ++ + G +W +AP + Sbjct: 502 --FNLPERFDAFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFAGHMPLW---LAPEQ 556 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 + + I + + +KI ARL VG D E+I + L P+ ++ G Sbjct: 557 VVVAAITSE---ANEYAKKITARLKAVGLSAKSDLRNEKINYKIREHSLQKVPVILVCGK 613 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVI 435 + + V ++ + + +S+EE I Sbjct: 614 REAETNSVSMRRLGSTDQVFLSIEETI 640 >gi|257465911|ref|ZP_05630222.1| threonyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|315917067|ref|ZP_07913307.1| threonine-tRNA ligase [Fusobacterium gonidiaformans ATCC 25563] gi|313690942|gb|EFS27777.1| threonine-tRNA ligase [Fusobacterium gonidiaformans ATCC 25563] Length = 637 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 96/454 (21%), Positives = 177/454 (38%), Gaps = 86/454 (18%) Query: 5 KYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K FL +++E AE H+ + L + ++ G +LP G + + + R E Sbjct: 228 KDFLKLMEE----AEKRDHRKLGKELELFFLSEYGPGFPFFLPKGMVLRNTLIDLWRAEH 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G +++ P + + +LW SG + +Y +E + + +D P + F+ Sbjct: 284 EKAGYVQIDTPIMLNRELWEISGHWFNY-RENMYTSSIDDVDFAIKPMNCPGGVLAFKYQ 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHS------- 173 SYR+LP ++ R E G+ R R F D++ F +T E + Sbjct: 343 QHSYRDLPARVAELGKVHRHEFSGALHGLFRVRAFTQDDSHIF-MTEEQIESEIIGVVNL 401 Query: 174 ----YNKMF-VSY-----LRIFHRLGLKSIPMRAESGPIGGDLSH---EFIVLADTGETQ 220 Y+K+F Y R +G I +AE+ + G L+H EF + + G+ Sbjct: 402 IDKFYSKLFGFQYSIELSTRPEKSIGTDEIWEKAETA-LAGALNHLGREFKI--NEGDGA 458 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 + K +DF I ++I W +L +LPE Sbjct: 459 FYGPK--LDFKIK------------DAIGRTWQCGTI--------QLDFNLPER------ 490 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGII 339 T+ G DG+ H V + G++ ++ + G + Sbjct: 491 -----------------FDVTYIGEDGEKHRPVMIHRVIYGSIERFIGILIEHYAGAFPM 533 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LL 398 W +AP ++ ++ I + C +++ A+L G DD E IG + A+ Sbjct: 534 W---LAPVQVKVLTI---NDECAPYAKEVVAQLKAQGIRAELDDRSESIGYKIREANGRY 587 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 P+QVI+G + +V ++ + +E M L+ Sbjct: 588 KIPMQVIIGKNEIEKREVNVRRFGSQAQESMELD 621 >gi|170077251|ref|YP_001733889.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7002] gi|169884920|gb|ACA98633.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7002] Length = 604 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 8/170 (4%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 Q G+ W P G + ++ EQ + G + P + DL+ SG + +Y ++M Sbjct: 214 QVGPGLPLWTPKGTLIRSTLENFLKAEQTKRGYQGVVTPHIARVDLFKVSGHWQNYREDM 273 Query: 94 LRL-----ADR-NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 + A+R ++ + P + I++ ++SYR LP + +R E Sbjct: 274 FPMMADGDAERAAEQGFVMKPMNCPFHIQIYKDQLRSYRELPIRLAEFGTVYRYEQSGEL 333 Query: 148 -GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 G+ R R F + D++ F +TP+ + + + L +F L LK+ R Sbjct: 334 GGLTRVRGFTVDDSHLF-VTPDQLEAEFFNVVDLILTVFKSLQLKNFKAR 382 >gi|298291991|ref|YP_003693930.1| threonyl-tRNA synthetase [Starkeya novella DSM 506] gi|296928502|gb|ADH89311.1| threonyl-tRNA synthetase [Starkeya novella DSM 506] Length = 666 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 74/184 (40%), Gaps = 15/184 (8%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA--IEMSVPTLQSADLWVESGRYDSYG 90 + G+ W P G N+ A +R R A E++ P + LW SG + Y Sbjct: 272 QEEGPGVVFWHPKGWNLFQNLVAYMR---RRLAADYSEVNAPQVLDKSLWETSGHWGWYK 328 Query: 91 KEMLRL-----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 M ++ A+ ND+ P + IF+ +KSYR+LP + R E Sbjct: 329 DNMFKVQPAGDAEDNDRVYALKPMNCPGHVQIFKHGLKSYRDLPMRLAEFGAVHRYEPSG 388 Query: 146 RF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--- 201 G+MR R F DA+ F T E K+ L + G + I ++ + P Sbjct: 389 ALHGLMRVRGFTQDDAHIF-CTEEQMAAECLKINELILSTYADFGFEEIVVKLSTRPEKR 447 Query: 202 IGGD 205 +G D Sbjct: 448 VGSD 451 >gi|85057943|ref|YP_456859.1| threonyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] gi|123738887|sp|Q2NIG3|SYT_AYWBP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|84790048|gb|ABC65780.1| threonyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] Length = 641 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 82/374 (21%), Positives = 153/374 (40%), Gaps = 35/374 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G V I +++ + P + + +L+ SG D Y M + Sbjct: 260 GLPFWLPKGATVRRIVERYIVDKELSYDYHHVYTPIMANTELYRISGHLDHYASNMFPIM 319 Query: 98 D-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 N + ++ P + I++ + SY+ LP ++ + R E G+ R RE Sbjct: 320 SLENGEKLVLRPMNCPHHMMIYKKNPHSYKELPLRIAELGMMHRFEKSGAVSGLQRVREM 379 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F P+ K K+ L ++ +K+ +R LS+ + Sbjct: 380 TLNDAHIFA-RPDQIKEEIKKIINLILEVYCDFNIKNYELR---------LSYR-----N 424 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 T+ + + D M + +E T + I L ++ A + ++F++L + Sbjct: 425 PNNTEKYFNDDQMWY--NAEKTLKETIKELGLPFKEAIGEAAFYGPKLDVQVFNALGNEE 482 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSH 333 +S ++ F K+ L TF G D K H V + + M R +A ++E + Sbjct: 483 TLSTVQLD----FLLPQKFDL----TFIGEDNKHHRPVVIHRAVVSTMERFLAHLVEET- 533 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 KG ++P +AP ++ LI + A + + +KI L V + +G + Sbjct: 534 --KG-VFPLWLAPVQVLLIPVSA--PLHFEFSQKIKETLQLQNFRVEINSKDNTLGYKIR 588 Query: 394 VADLLGFPLQVIVG 407 A L P QV++G Sbjct: 589 EAQKLKIPYQVVIG 602 >gi|225561384|gb|EEH09664.1| threonyl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 577 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 14/144 (9%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 Q+S G +LP G L+ + + +R + + G +E+ P++ LW SG + +Y +M Sbjct: 104 QYSPGSPLFLPNGTHILNKLTSFLRAQYTQYGFLEVLTPSIYKKSLWKVSGHWQNYKDDM 163 Query: 94 LRLADRN-------------DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 + RN D++ P + +F+S SYR LP + R Sbjct: 164 YEVRGRNATGEQTAETQIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHR 223 Query: 141 DELRPRF-GVMRSREFLMKDAYSF 163 +E+ G+ R R F D + F Sbjct: 224 NEISGSLSGLTRVRRFHQDDGHIF 247 >gi|295704482|ref|YP_003597557.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319] gi|294802141|gb|ADF39207.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319] Length = 296 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 7/152 (4%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE +H+ + L M + + G+ +LP G + + +++ + G E+ P Sbjct: 6 EAEKRNHQKLGQELELFMSMEEAPGMPFFLPNGMIVRNELENYWKQKHYKAGYQEIKTPI 65 Query: 74 LQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + +LW +SG ++ Y + M D+ + A+ P + +F S +SYR LP + Sbjct: 66 MMKQELWEQSGHWEHYHENMYFSNVDKQNYAI--KPMNCPGAILLFNSKRRSYRELPVRY 123 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 ++ L R EL G++R R F DA+ F Sbjct: 124 AELGLVHRHELSGSLNGLLRVRSFTQDDAHLF 155 >gi|168064726|ref|XP_001784310.1| predicted protein [Physcomitrella patens subsp. patens] gi|162664141|gb|EDQ50872.1| predicted protein [Physcomitrella patens subsp. patens] Length = 685 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + + A IR+E + G E+ P + + LW SG +Y Sbjct: 304 FFHELSPGSCFFLPHGARIYNKLQAFIRDEYRKRGYEEVVSPNMFNMQLWETSGHAANYK 363 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + + P + IF ++SYR LP + R+EL G+ Sbjct: 364 DNMFTF-EVEKQEFGLKPMNCPGHCLIFDHRVRSYRELPLRLADFGVLHRNELSGALSGL 422 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 423 TRVRRFQQDDAHIF 436 >gi|240274490|gb|EER38006.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H143] Length = 550 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 14/144 (9%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 Q+S G +LP G L+ + + +R + + G +E+ P++ LW SG + +Y +M Sbjct: 105 QYSPGSPLFLPNGTHILNKLTSFLRAQYTQYGFLEVLTPSIYKKSLWKVSGHWQNYKDDM 164 Query: 94 LRLADRN-------------DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 + RN D++ P + +F+S SYR LP + R Sbjct: 165 YEVRGRNATGEQTAETQIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHR 224 Query: 141 DELRPRF-GVMRSREFLMKDAYSF 163 +E+ G+ R R F D + F Sbjct: 225 NEISGSLSGLTRVRRFHQDDGHIF 248 >gi|226304250|ref|YP_002764208.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4] gi|226183365|dbj|BAH31469.1| putative threonyl-tRNA synthetase [Rhodococcus erythropolis PR4] Length = 406 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + E+ R+G + P + +L+ SG + + ++M Sbjct: 24 GLPLWLPDGAVIRNELEKFAAEQAARSGCQGVYTPVMAKKELYERSGHWSKFSEDMFPEM 83 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ + P + +F + +SYR LPF ++ FR EL G+ R R+ Sbjct: 84 KIGGESFLLRPANCPHHAQVFAARGRSYRELPFRVRELGSMFRSELSGVLSGLSRVRQIN 143 Query: 157 MKDAYSF 163 + DA+ F Sbjct: 144 LDDAHVF 150 >gi|294667581|ref|ZP_06732796.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602701|gb|EFF46137.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 634 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 76/394 (19%), Positives = 141/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 256 LQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 316 AMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F L + + L ++ G I ++ P +G D + Sbjct: 375 RVRGFTQDDGHVFCLESQ-IESEVTAFHQQALAVYTAFGFDDIQIKIALRPEKRLGDDAT 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A V C ++ + P A Y + H L Sbjct: 434 WDKAESALRSALGV-CGVEWQELPGEG-------------------AFYGPKIEYH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 471 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G +P +AP ++ + NI D+ K L+ G V D E+ Sbjct: 524 ILIEHHAGA---FPSWLAPVQVVVANITDAQAEYVDSVRKT---LANQGFRVSADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + + P ++VG + + V ++ R Sbjct: 578 IGYKIREHTMQRVPYLLVVGDREKENGAVAVRTR 611 >gi|219682056|ref|YP_002468440.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254783513|sp|B8D730|SYT_BUCAT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219621789|gb|ACL29945.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085869|gb|ADP65951.1| threonyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086439|gb|ADP66520.1| threonyl-tRNA synthetase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087022|gb|ADP67102.1| threonyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087587|gb|ADP67666.1| threonyl-tRNA synthetase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 642 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 85/398 (21%), Positives = 151/398 (37%), Gaps = 54/398 (13%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GMI H+KG W+ + + +R + E+ P L +W +SG +D+Y Sbjct: 262 GMIFWHNKG---WIIFNE-----LQNFVRVKLKEYKYEEVKTPLLIDKLIWKQSGHWDNY 313 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + + + I P + IF S +KSYR+LP + R+E G Sbjct: 314 KNAIFTTLSEHREYCI-KPMNCPGHVQIFNSRLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 +MR R F DA+ F T E + N ++ K I ++ + P IG D Sbjct: 373 LMRVRNFTQDDAHIF-CTREQVRSEINDCIKMIYDLYSTFHFKKILVKLSTRPEKRIGTD 431 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 L + E D D++ N + ++ + A E Sbjct: 432 ------SLWNESE------------------KDLSDMLIENHLSFEYQSGEGAFYGPKIE 467 Query: 266 KLF-DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM-R 323 + DSL N + ++ FY + S S + K V + +G++ R Sbjct: 468 FILQDSLDRNWQCGTIQLD----FYLPLRLS---SFYINEKNEKKVPVIIHRAILGSIER 520 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE P ++P ++ +I+I + ++++ + S V + D Sbjct: 521 FIGILIEECSGN----LPTWLSPVQVVIISI---TDISSGYVKELFKKFSDVNIRIECDL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P +I G K S K+ +++R Sbjct: 574 RNEKIGFKIREHTLRRIPYILICGEKESSSKKISVRNR 611 >gi|39969493|ref|XP_366137.1| hypothetical protein MGG_10357 [Magnaporthe oryzae 70-15] gi|145015163|gb|EDJ99731.1| hypothetical protein MGG_10357 [Magnaporthe oryzae 70-15] Length = 566 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 7/173 (4%) Query: 23 HKLMLRTGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADL 79 +++L+ MI +++ G Y P + +E+ + G E S P L S L Sbjct: 76 QEVVLKAEMIEYYTEISGFYILRPAAMFVWSQIRKWFQEKIDVMGVEEASFPMFLSSKSL 135 Query: 80 WVESGRYDSYGKEMLRLADRNDK----AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 E + + E+ + DK + PT E VM + I+S+R+LP Q Sbjct: 136 EKEKDHVEGFAPELAWVTKAGDKDLEVPVAVRPTSEAVMYPYYSKWIRSHRDLPLRLNQW 195 Query: 136 QLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 R E + +R+REFL ++ ++ LT E + ++ Y ++ +L Sbjct: 196 NSVVRWEAKQTTPFLRAREFLWQEGHTAHLTEEDAGKEVLEILEHYAGVYEQL 248 >gi|293192627|ref|ZP_06609581.1| threonine--tRNA ligase [Actinomyces odontolyticus F0309] gi|292820134|gb|EFF79131.1| threonine--tRNA ligase [Actinomyces odontolyticus F0309] Length = 677 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 76/345 (22%), Positives = 130/345 (37%), Gaps = 63/345 (18%) Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP FY++ +R E G+ R R F D++++ TPE + Sbjct: 364 IFRSRGRSYRELPLRFYELGHDYRYEKSGVVHGLTRMRGFTQDDSHTY-CTPEQASEEIR 422 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 +L I GLK + + G +FI Sbjct: 423 TQIAFFLSILSAFGLKDFYLELSTRDEDGKKKDKFI------------------------ 458 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV--------GHI 287 +D E W A A D D +P+ + G +V G Sbjct: 459 GSD-----------EDWAAATKALEDACAATGLDLVPDPGGAAFYGPKVSVQVKDAIGRT 507 Query: 288 FYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 + T ++ P + ADG + V + S +G++ V+ + G W Sbjct: 508 WQMSTIQYDFNQPDRFDLEYTAADGSRQRPVMIHSAKLGSVERFIGVLTEHYAGAFPAW- 566 Query: 342 DSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 ++P ++ LI + +A D +D K+ R +V D+ D G++I + A D + Sbjct: 567 --LSPVQVRLIPVAEAFDGYVKDVAAKLRERGVRVETDLSDDRFGKKI--RNASKDKI-- 620 Query: 401 PLQVIVGSKFVSDSKVEIKHR----LTGIREDMSLEEVINYASHR 441 P +I G + V V + R G+ D ++E ++++ R Sbjct: 621 PFTLIAGGEDVEAGAVSFRLRDGSQHNGVAVDRAVELIVSHIEQR 665 >gi|221122393|ref|XP_002164939.1| PREDICTED: similar to threonyl-tRNA synthetase, partial [Hydra magnipapillata] Length = 801 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G +LP G + + + IR E N G E+ P + S LW +SG + Y M Sbjct: 334 SPGSAFFLPKGAFIYNTLVSFIRSEYNNRGFQEVITPNMFSTKLWEQSGHWQHYATNMFS 393 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 ++ + P + +F + +S+R LP F + R+EL G+ R R Sbjct: 394 FEVEKERFAL-KPMNCPGHCVMFNNRPRSWRELPLRFADFGVLHRNELSGTLTGLTRVRR 452 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 453 FQQDDAHIF 461 Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 2/109 (1%) Query: 56 IIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT 115 I + E N G E+ P + S LW +SG + Y M ++ + P + Sbjct: 486 IGKSEYNNRGFQEVITPNMFSTKLWEQSGHWQHYATNMFSFEVEKERFAL-KPMNCPGHC 544 Query: 116 DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 +F + +S+R LP F + R+EL G+ R R F DA+ F Sbjct: 545 VMFNNRPRSWRELPLRFADFGVLHRNELSGTLTGLTRVRRFQQDDAHIF 593 >gi|219681500|ref|YP_002467885.1| threonyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471181|ref|ZP_05635180.1| threonyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254783512|sp|B8D8S6|SYT_BUCA5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219624343|gb|ACL30498.1| threonyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 642 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 85/398 (21%), Positives = 151/398 (37%), Gaps = 54/398 (13%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GMI H+KG W+ + + +R + E+ P L +W +SG +D+Y Sbjct: 262 GMIFWHNKG---WIIFNE-----LQNFVRVKLKEYKYEEVKTPLLIDKLIWKQSGHWDNY 313 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + + + I P + IF S +KSYR+LP + R+E G Sbjct: 314 KNAIFTTLSEHREYCI-KPMNCPGHVQIFNSRLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 +MR R F DA+ F T E + N ++ K I ++ + P IG D Sbjct: 373 LMRVRNFTQDDAHIF-CTREQVRSEINDCIKMIYDLYSTFHFKKILVKLSTRPEKRIGTD 431 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 L + E D D++ N + ++ + A E Sbjct: 432 ------SLWNESE------------------KDLSDMLIENHLSFEYQSGEGAFYGPKIE 467 Query: 266 KLF-DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM-R 323 + DSL N + ++ FY + S S + K V + +G++ R Sbjct: 468 FILQDSLDRNWQCGTIQLD----FYLPLRLS---SFYINEKNEKKVPVIIHRAILGSIER 520 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE P ++P ++ +I+I + ++++ + S V + D Sbjct: 521 FIGILIEECSGN----LPTWLSPVQVVIISI---TDISSGYVKELFKKFSDVNIRIECDL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P +I G K S K+ +++R Sbjct: 574 RNEKIGFKIREHTLRRIPYILICGEKESSSKKISVRNR 611 >gi|17987198|ref|NP_539832.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|256044731|ref|ZP_05447635.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|260564073|ref|ZP_05834559.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|265991152|ref|ZP_06103709.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|22654120|sp|Q8YH89|SYT_BRUME RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|17982868|gb|AAL52096.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|260154089|gb|EEW89181.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|263001936|gb|EEZ14511.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] Length = 658 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 235 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLQI 409 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 410 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 440 >gi|294626197|ref|ZP_06704803.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599549|gb|EFF43680.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 634 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 76/394 (19%), Positives = 141/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G V +R+ +G E+ P + LW +SG +D+Y Sbjct: 256 LQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F + SYR+LP + + R+E G++ Sbjct: 316 AMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGIL 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F D + F L + + L ++ G I ++ P +G D + Sbjct: 375 RVRGFTQDDGHVFCLESQ-IESEVTAFHQQALAVYTAFGFDDIQIKIALRPEKRLGDDAT 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A V C ++ + P A Y + H L Sbjct: 434 WDKAESALRSALGV-CGVEWQELPGEG-------------------AFYGPKIEYH---L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D++ ++ ++ G +Y S K H V + +G+M Sbjct: 471 KDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQ-------KKHPVMLHRAIVGSMERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ H G +P +AP ++ + NI D+ K L+ G V D E+ Sbjct: 524 ILIEHHAGA---FPSWLAPVQVVVANITDAQAEYVDSVRKT---LANQGFRVSADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + + P ++VG + + V ++ R Sbjct: 578 IGYKIREHTMQRVPYLLVVGDREKENGAVAVRTR 611 >gi|33286920|gb|AAH55371.1| Threonyl-tRNA synthetase [Mus musculus] Length = 722 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 91/445 (20%), Positives = 177/445 (39%), Gaps = 65/445 (14%) Query: 10 ILQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L+E + E A ++ +TG H+ S G +LP G + + IR E + Sbjct: 306 LLKEWEKFQEEAKNRDYRKTGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRK 365 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + ++ LW+ SG + Y + M ++ + P + +F + Sbjct: 366 RGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEQFAL-KPMNCPGHCLMFDHRPR 424 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 S+R LP + R+EL G+ R R F DA+ F + K + +L Sbjct: 425 SWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFL 482 Query: 183 RIFHRLGLKSIPMRAESGP--IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 R + + S + + P GD I + + E Q+ EN Sbjct: 483 RTVYSVFGFSFKLNLSTRPEKFLGD-----IEIWNQAEKQL-------------EN---- 520 Query: 241 DIISLNSIVEQWT------APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 SLN E+W A Y D+ ++ D++ + + ++ F ++ Sbjct: 521 ---SLNEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF 570 Query: 295 SLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 +L T+ DG D V + +G++ + A++ ++ GK WP ++P ++ ++ Sbjct: 571 NL----TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGK---WPFWLSPRQVMVV 623 Query: 353 NIKAHDQVCRDACEKIYARL--SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + C + +K+ + +K D D G + + A L + ++VG K Sbjct: 624 PVGP---TCDEYAQKVRQQFHDAKFMADTDLDP-GCTLNKKIRNAQLAQYNFILVVGEKE 679 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVI 435 + V I+ R + + ++EE + Sbjct: 680 KASGTVNIRTRDNKVHGERTVEETV 704 >gi|83647272|ref|YP_435707.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396] gi|123753567|sp|Q2SDJ2|SYT_HAHCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|83635315|gb|ABC31282.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396] Length = 637 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 88/423 (20%), Positives = 161/423 (38%), Gaps = 67/423 (15%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H K+ + G+ H + + G+ W G + +R++ + E+ P Sbjct: 237 EAEKRDHRKIGKKLGLFHMQEEAPGMVFWHSDGWTLYQVIEQYMRKQLRKHDYKEIKTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW +SG ++ + +M D+ P + +F ++SYR+LP Sbjct: 297 VVERTLWEKSGHWEKFRDDMF-TTQSEDRDFAIKPMNCPCHVQVFNQGLRSYRDLPLRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F DA+ F T E + K F+ +L Sbjct: 356 EFGSCHRNEASGALHGLMRVRGFTQDDAHIF-CTEEQIQEEVGK-FIDFL---------- 403 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 HE V AD G +++ + P + D+I W Sbjct: 404 ---------------HE--VYADFGFSEII----YKLSTRPEKRVGSDEI---------W 433 Query: 253 TAPYAATSDVHNEK--LFDSLPENKRVSARGIE------VGHIFYFGT---KYSLP--MS 299 A +D + K ++ LP +E +G ++ GT +S+P + Sbjct: 434 DKSEKALADALDAKGLPWEELPGEGAFYGPKVEFSLKDCLGRLWQCGTVQVDFSMPGRLG 493 Query: 300 ATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + + + V + +G+ ++ ++G +P +AP +++++NI Sbjct: 494 AQYVSDEQVRKTPVMLHRAILGSFERFIGILIEHYEGA---FPSWLAPTQVAILNITDKQ 550 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D C+KI L+ G V D E+I + L P +VG K V + I Sbjct: 551 A---DYCKKIGEILNDKGFRVRLDLRNEKINYKIREHTLNRVPFLAVVGDKEVETQCLAI 607 Query: 419 KHR 421 + R Sbjct: 608 RTR 610 >gi|312077291|ref|XP_003141239.1| threonyl-tRNA synthetase [Loa loa] gi|307763596|gb|EFO22830.1| threonyl-tRNA synthetase [Loa loa] Length = 681 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 81/419 (19%), Positives = 164/419 (39%), Gaps = 65/419 (15%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G W P G +++ IR+E + G E+ P + ++ LW +SG ++ Y Sbjct: 294 FFHPLSPGSAFWYPKGAHIYNSLCNFIRKEYRKRGFTEVISPNMYNSKLWEQSGHWEHYS 353 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM 150 M ++ D + P + H Y ++P T ++ L++ D FGV+ Sbjct: 354 DNMFKI-DIEKETFGLKPMN-------CPGHCLMYSHMPRTHNELPLRYAD-----FGVL 400 Query: 151 RSRE--------FLMKDAYSF---DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 ++ F DA+ F D E + + + +Y +F ++ R E Sbjct: 401 HRKKTVEEITIIFQQDDAHIFCRQDQVVEEIMNCIDFLKYAYNDVFGFTFKLNLSTRPEV 460 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII-SLNSIVEQWTAPYAA 258 G +G I + N+ D + +LN+ +W Sbjct: 461 GYLGD---------------------------IETWNSAEDKLKEALNASGHKWELN-PG 492 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 + K+ ++ + R + + F ++ L + F + V + Sbjct: 493 DGAFYGPKIDITIQDALRRLHQCATIQLDFQLPIRFDL---SYFDENSERQRPVMIHRAL 549 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGC 377 +G++ + A++ ++ GK WP ++P + +I + ++ + R KIY + G Sbjct: 550 LGSIERMTAILAENYGGK---WPFWLSPRQAKVITVHESQNDYGRVVQRKIY----EAGF 602 Query: 378 DVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +V +D D + + Q A L F ++VG + V ++ R +R ++ LE++I Sbjct: 603 EVEFDADSSDTLNKQIRNAQLAQFNFILVVGPTEARNGTVNVRTRDNAVRGEIKLEDLI 661 >gi|291617247|ref|YP_003519989.1| ThrS [Pantoea ananatis LMG 20103] gi|291152277|gb|ADD76861.1| ThrS [Pantoea ananatis LMG 20103] Length = 642 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 82/398 (20%), Positives = 144/398 (36%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N ++ G + I ++ + P IG D + Sbjct: 375 RVRGFTQDDAHIF-CTEDQLRTEVNSCIRMVYDMYSTFGFEKILVKLSTRPEKRIGSDET 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 + D ++ N+I ++ A E Sbjct: 434 WD------------------------RAEEDLAAALNENNIEFEYQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L+D L R + G + +SLP + AT+ G + M I G+M Sbjct: 470 LYDCLD-------RAWQCGTV---QLDFSLPKRLDATYVGENNDRQTPVMIHRAILGSME 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +P +AP + ++NI + E + +L G V D Sbjct: 520 RFIGILTEEFAG---FFPSWLAPMQAVVMNITDGQA---EYVETLTRKLQNAGIRVKADL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 574 RNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTR 611 >gi|171910276|ref|ZP_02925746.1| prolyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136] Length = 510 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 66/338 (19%), Positives = 130/338 (38%), Gaps = 75/338 (22%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ + PT E ++ F ++SYR+LP Q R E+RPR +R+ EFL ++ Sbjct: 119 EEPFVIRPTSETIIGAAFARWVESYRDLPLLINQWANVMRWEMRPRL-FLRTAEFLWQEG 177 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 + + H ++ + ++ H + +F+ Sbjct: 178 H--------TAHETSEEAMKEAKLMH------------------GVYEDFL--------- 202 Query: 221 VFCSKDFMDFP-IPSENTDFDDII-SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 ++++ P IP E T+ + +LN+ + + V + K Sbjct: 203 ----RNYLAIPAIPGEKTERERFPGALNT--------FTVEAMVQDRK------------ 238 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 I+ G + G ++ + F G D H+ S+G+ + R++ ++ + D G Sbjct: 239 --AIQAGTSHFLGQNFAKAANIEFLGRDNLRHHAWTTSWGV-STRLIGTLLMAHADDDGA 295 Query: 339 IWPDSVAPFKISLINIK----AHDQVCRDACEKIYARLSKVG-----CDVFWDDMGEQIG 389 + P +AP +I ++ + D V DACE + L V D G Sbjct: 296 VLPPRIAPTQIVILPVTPKPDTKDAVI-DACEALATTLRAHAFHGEPLRVHVDKRDIAGG 354 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 ++ G PL+V +G + ++ V + R G +E Sbjct: 355 ARNWEWIKKGVPLRVEIGPRDITSRSVAVARRDRGPKE 392 >gi|159489080|ref|XP_001702525.1| predicted protein [Chlamydomonas reinhardtii] gi|158280547|gb|EDP06304.1| predicted protein [Chlamydomonas reinhardtii] Length = 446 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 8/164 (4%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RGI+ G +S + T++ D + +V S+G+ R + +I + D KG Sbjct: 177 TGRGIQGATSHCLGQNFSKMFNITYEDDDRQKQHVWQNSWGL-TTRSLGVMIMTHADDKG 235 Query: 338 IIWPDSVAPFKISLINIKAHD------QVCRDACEKIYARLSKVGCDVFWDDMGEQI-GS 390 ++ P VAP ++ LI I Q D +++ L G V D G Sbjct: 236 LVLPPRVAPKQVVLIPIPKASTAPEAVQAMLDKVDELTKALEDKGVRVVTDTRSNYTPGW 295 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 ++ +L G PL+V +G K + ++ V R TG +E + +V Sbjct: 296 KYNHWELKGLPLRVELGPKDMDNAAVMTCRRDTGAKEVVPWADV 339 Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 41/88 (46%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM F I+S+R+LP Q R E + +RSREFL ++ Sbjct: 58 EKPIAIRPTSETVMYPYFSQWIRSHRDLPLRLNQWTNVVRWEFKYPTPFIRSREFLWQEG 117 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ T E ++ + Y ++ L Sbjct: 118 HTAFATQEEAEREVLDILELYRGVYEDL 145 >gi|15616745|ref|NP_239957.1| threonyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11134938|sp|P57225|SYT_BUCAI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|25292947|pir||C84944 threonine-tRNA ligase (EC 6.1.1.3) [imported] - Buchnera sp. (strain APS) gi|10038808|dbj|BAB12843.1| threonyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 642 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 85/398 (21%), Positives = 151/398 (37%), Gaps = 54/398 (13%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GMI H+KG W+ + + +R + E+ P L +W +SG +D+Y Sbjct: 262 GMIFWHNKG---WIIFNE-----LQNFVRVKLKEYKYEEVKTPLLIDKLIWKQSGHWDNY 313 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + + + I P + IF S +KSYR+LP + R+E G Sbjct: 314 KNAIFTTLSEHREYCI-KPMNCPGHVQIFNSRLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 +MR R F DA+ F T E + N ++ K I ++ + P IG D Sbjct: 373 LMRVRNFTQDDAHIF-CTREQVRSEINDCIKMIYDLYSTFHFKKILVKLSTRPEKRIGTD 431 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 L + E D D++ N + ++ + A E Sbjct: 432 ------SLWNESE------------------KDLSDMLIENHLSFEYQSGEGAFYGPKIE 467 Query: 266 KLF-DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM-R 323 + DSL N + ++ FY + S S + K V + +G++ R Sbjct: 468 FILQDSLDRNWQCGTIQLD----FYLPLRLS---SFYINEKNEKKVPVIIHRAILGSIER 520 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE P ++P ++ +I+I + ++++ + S V + D Sbjct: 521 FIGILIEECSGN----LPTWLSPVQVVIISI---TDISSGYVKELFKKFSDVNIRIECDL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P +I G K S K+ +++R Sbjct: 574 RNEKIGFKIREHTLRRIPYILICGEKESSSKKISVRNR 611 >gi|237747667|ref|ZP_04578147.1| threonyl-tRNA synthetase [Oxalobacter formigenes OXCC13] gi|229379029|gb|EEO29120.1| threonyl-tRNA synthetase [Oxalobacter formigenes OXCC13] Length = 635 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 10/135 (7%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 G+I H+KG W V +R G E+ P + LW +SG +D+Y Sbjct: 261 GLIFWHAKGWTIW--------QQVEQYMRRVYQENGYQEVKGPQILDRSLWEKSGHWDNY 312 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M N + P + I+RS++ SYR LP + + R+E G Sbjct: 313 KENMFTTESEN-RIYALKPMNCPGHVQIYRSNLHSYRELPLRYGEFGQCHRNEPSGSLHG 371 Query: 149 VMRSREFLMKDAYSF 163 +MR R F D + F Sbjct: 372 MMRVRGFTQDDGHIF 386 >gi|145353842|ref|XP_001421209.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581446|gb|ABO99502.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 448 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 5/146 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G G ++ TF G+ YV S+G+ + R++ ++ + D G+I Sbjct: 186 KALQAGTSHNLGDNFAKAFDTTFLDDKGETQYVHQSSWGV-STRLIGGILMTHGDDSGLI 244 Query: 340 WPDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVA 395 P +AP ++ ++ I D + + + I + LS G D D + G +F Sbjct: 245 LPPRLAPIQVVVVPIWKKDEEKEAVMASVDSIISSLSNAGVRTHLDADQSKSPGWKFNQY 304 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ G P+++ VG K V+ + R Sbjct: 305 EMKGVPIRIEVGPKDVAKGACVVARR 330 >gi|83748297|ref|ZP_00945322.1| Threonyl-tRNA synthetase [Ralstonia solanacearum UW551] gi|83725029|gb|EAP72182.1| Threonyl-tRNA synthetase [Ralstonia solanacearum UW551] Length = 635 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + V +R G E+ P + LW SG + +Y K Sbjct: 255 LQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDRTLWEHSGHWQNY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + IF ++SYR+LP + R+E G+M Sbjct: 314 ENMFVTESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSF 163 R R F+ DA+ F Sbjct: 374 RVRGFVQDDAHIF 386 >gi|300703878|ref|YP_003745480.1| threonine tRNA synthetase [Ralstonia solanacearum CFBP2957] gi|299071541|emb|CBJ42865.1| threonine tRNA synthetase [Ralstonia solanacearum CFBP2957] Length = 635 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + V +R G E+ P + LW SG + +Y K Sbjct: 255 LQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDRTLWEHSGHWQNY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + + + P + IF ++SYR+LP + R+E G+M Sbjct: 314 ENMFVTESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGLM 373 Query: 151 RSREFLMKDAYSF 163 R R F+ DA+ F Sbjct: 374 RVRGFVQDDAHIF 386 >gi|291327048|ref|ZP_06126787.2| threonine--tRNA ligase [Providencia rettgeri DSM 1131] gi|291311980|gb|EFE52433.1| threonine--tRNA ligase [Providencia rettgeri DSM 1131] Length = 653 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 86/425 (20%), Positives = 155/425 (36%), Gaps = 50/425 (11%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + Y L + + RD +L L + + + G+ W G + +R + Sbjct: 241 AAYLLRLEEAAKRDHRKIGKQLDLYH--MQEEAPGMAFWHNDGWTIFRELETFVRTKLKA 298 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW ++G +D+Y M + N + + P + IF +K Sbjct: 299 YNYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCV-KPMNCPGHVQIFNQGLK 357 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F T E Sbjct: 358 SYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIF-CTEEQILSEVTSCIEMIY 416 Query: 183 RIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + I ++ + P IG D E A+ SK P E + Sbjct: 417 DVYATFGFEKIVVKLSTRPEKRIGTD---EMWDRAEEDLANALKSKGIEFEYQPGEGAFY 473 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP-- 297 I L+D L R + G + + LP Sbjct: 474 GPKIEFT--------------------LYDCLD-------RAWQCGTV---QLDFFLPGR 503 Query: 298 MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 ++A++ G + + V + +G++ ++ + G +P +AP ++ ++NI Sbjct: 504 LTASYVGENNERIVPVMIHRAVLGSLERFIGILTEEYAG---FFPTWLAPQQVVVMNITD 560 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D +++ ++L VG D E+IG + L P ++ G K V KV Sbjct: 561 SQA---DYVQELVSKLQSVGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKV 617 Query: 417 EIKHR 421 ++ R Sbjct: 618 AVRTR 622 >gi|312143811|ref|YP_003995257.1| threonyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] gi|311904462|gb|ADQ14903.1| threonyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] Length = 652 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 4/146 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + +G+ P G K + + + +E+ + G P + +DL+ SG ++ Y Sbjct: 257 VDEIGQGLPLLKPKGAKVVQILQRFVEDEEEKRGYQITKTPFMAKSDLYEISGHWEHYKD 316 Query: 92 EMLRLAD--RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M L D ++D M P I+ S ++SYR+LP + + FR+E G Sbjct: 317 GMFILGDEEKDDNLMALRPMTCPFQFQIYNSKLRSYRDLPIRYSETSSLFRNEASGEMHG 376 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSY 174 ++R R+F + + + +TPE + + Sbjct: 377 LIRLRQFTISEGHLI-VTPEQLEEEF 401 >gi|228908133|ref|ZP_04071981.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228851551|gb|EEM96357.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200] Length = 640 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 3/143 (2%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M + + G+ +LP GQ + + A +R Q E+ P + + ++W SG + Sbjct: 254 LELFMFSEEAPGMPFYLPKGQMIRNELEAFLRGIQKEYNYQEVRTPFMMNQEVWERSGHW 313 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 Y K+ + ++ ++K+ P + +F++ + SYR LP + R E Sbjct: 314 GHY-KDNMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGA 372 Query: 147 F-GVMRSREFLMKDAYSFDLTPE 168 G++R R F DA+ F +TP+ Sbjct: 373 LNGLLRVRTFCQDDAHLF-VTPK 394 >gi|218782046|ref|YP_002433364.1| threonyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] gi|226701455|sp|B8FN26|SYT_DESAA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|218763430|gb|ACL05896.1| Threonyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] Length = 636 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 96/393 (24%), Positives = 155/393 (39%), Gaps = 67/393 (17%) Query: 29 TGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDS 88 GM H++G+ W + + A REE + G +E P + + LW SG +++ Sbjct: 256 AGMPFFHARGMELW--------NALLAYWREEHKKAGYVETKTPIMLNKSLWERSGHWEN 307 Query: 89 YGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 Y + M L + D A+ P + ++++ SY +LP +I L R EL Sbjct: 308 YRENMYTSLIEDFDYAI--KPMNCPGGMLLYKTKHHSYNDLPIRAGEIGLVHRHELSGVL 365 Query: 148 -GVMRSREFLMKDAYSFDLTPE-------GSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 G+ R R F DA+ F +T E G +M+ ++ FH L L + P + Sbjct: 366 SGLFRVRAFHQDDAHIF-MTEEMIEDEILGVLQLVERMYSTFGLGFH-LELSTRPEKT-- 421 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 IG D E T + K D+ I + F Y Sbjct: 422 --IGTDEQWE----KATEGLRAALDKSGRDYKINEGDGAF----------------YGPK 459 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSY 317 D+H + D+L R + G I +LP T+ GAD + H M Sbjct: 460 IDIH---IKDAL-------GRTWQCGTI---QLDMNLPERFDLTYVGADNQRHRPVMIHR 506 Query: 318 GI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 I G++ ++ + GK +W ++P + ++ + +D V A E + ARL + G Sbjct: 507 VIYGSIERFLGILIEHYAGKFPLW---LSPCQAVVLAM--NDDVAGYAKE-VKARLEEAG 560 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + D E I + A L PL + VG K Sbjct: 561 LRMEIDLRAESINKKVRDAQLSKIPLMLTVGGK 593 >gi|225560803|gb|EEH09084.1| threonyl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 750 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 8/160 (5%) Query: 11 LQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +QE+ + E A + LR G + S G LP G K + + A++R E + Sbjct: 293 MQEHLKFLEEAEKRNHLRIGKDQDLFFFDEVSPGCPFLLPNGTKIFNALQALLRSEYRKR 352 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + +W +SG + Y +M +L D + P + +F +S Sbjct: 353 GYQEVQSPNMYDVGIWRQSGHWQHYKDDMFKL-DIEKRTWALKPMNCPGHAIMFGHRERS 411 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 YR LP + R+E G+ R R+F D + F Sbjct: 412 YRELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIF 451 >gi|299135910|ref|ZP_07029094.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] gi|298602034|gb|EFI58188.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] Length = 680 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 82/416 (19%), Positives = 147/416 (35%), Gaps = 58/416 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +R E R G + P + +LW SG Y M Sbjct: 297 GLIFWHPKGGLIRKTMEDWMRAECVRRGYNLVVTPHIMRRELWKISGHEGYYSDNMYPPM 356 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +D P + I+++ KSYR+LP + ++ +R E G++R R F Sbjct: 357 ELDDAEYRLKPMNCPGHILIYKNSPKSYRDLPVRYAELGNVYRYERSGTMHGLLRVRGFT 416 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F TP+ + E + + Sbjct: 417 QDDAHIF-CTPD------------------------------------QIEDEVVACIEF 439 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK--LFDSLPEN 274 ++ V + F DF + D + W + K F +P Sbjct: 440 AQS-VLTTFGFADFKVELSTWDPKKPQDYTGSADHWATAINSLKTALGRKNIPFVEIPGE 498 Query: 275 KRVSARGIEV------GHIFYFGT-KYSLPMSATFK----GADGKDHYVQMGSYGI-GAM 322 I+V G ++ T ++ + A F+ G DG+ H M + G++ Sbjct: 499 AAFYGPKIDVKLVDVLGRLWQLSTVQFDFNLPARFELEYIGEDGERHRPVMVHRALFGSV 558 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 V+ + G +W +AP ++ L+ I + E + ARL G V D Sbjct: 559 ERFFGVLIEHYAGAFPMW---LAPVQVGLVPISNEKHLAY--AESVKARLEAAGLRVELD 613 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 ++ ++ L FP +++G K + V ++ R G ++++E I A Sbjct: 614 GGNGKMNAKIRDFGLQKFPFILVLGDKEAASDSVSVRVRAKGDEGSVTVDEFIARA 669 >gi|71991342|ref|NP_001022777.1| Prolyl tRNA Synthetase family member (prs-1) [Caenorhabditis elegans] gi|459009|gb|AAA50660.1| Prolyl trna synthetase protein 1, isoform a [Caenorhabditis elegans] Length = 581 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 67/332 (20%), Positives = 129/332 (38%), Gaps = 67/332 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM ++ ++S+R+LP Q R E + +R+REFL ++ ++ P Sbjct: 195 PTSETVMYPSYKKWVQSHRDLPIKLNQWCNVVRWEFKHPTPFLRTREFLWQEGHTAFANP 254 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++ ++ Y ++ L +IP +V E + F DF Sbjct: 255 ADAEKEVFQILDLYAGVY--TDLLAIP----------------VVKGRKSEKEKFAGGDF 296 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + VE + A + RGI+ Sbjct: 297 ------------------TTTVEAYVA----------------------CNGRGIQGATS 316 Query: 288 FYFGTKYSLPMSATFK--GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 + G +S +++ +G+ + S+G+ + R + A++ D KG++ P VA Sbjct: 317 HHLGQNFSKMFDISYEDPAKEGERAFAWQNSWGL-STRTIGAMVMIHGDDKGLVLPPRVA 375 Query: 346 PFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ--IGSQFAVADLLGF 400 ++ ++ + + Q DA +K+ L G D+ E G +F +L G Sbjct: 376 AVQVIVVPVGFKTENKQSLFDAVDKVTKDLVADGVKAE-HDLRENYNAGWKFNHWELKGV 434 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 P++ VG ++ ++V R G ++ +SLE Sbjct: 435 PIRFEVGPNDLAKNQVTAVIRHNGEKKQLSLE 466 >gi|187918575|ref|YP_001884138.1| threonyl-tRNA synthetase [Borrelia hermsii DAH] gi|238689297|sp|B2S162|SYT_BORHD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119861423|gb|AAX17218.1| threonyl-tRNA synthetase [Borrelia hermsii DAH] Length = 583 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 78/412 (18%), Positives = 152/412 (36%), Gaps = 42/412 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G + + REE + G + P + + LW SG D Y + M Sbjct: 205 GLIFFHPNGARIRAIIEDFWREEHFKNGYDVLFTPHIGKSCLWETSGHLDFYKESMFEKM 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G MR R F Sbjct: 265 EMDKSNYYVKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGTMRVRGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ E K ++ L ++++ G + + P Sbjct: 325 QDDAHII-CAYEQVKSEVQEVLRFALYMWNQFGFADLKAYLSTKP--------------- 368 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + KD + + D+ I E A Y D+ K+ DSL + Sbjct: 369 --EKAVGDKDDWEMSVKVLEEALIDLNIAYDIDEGGGAFYGPKIDL---KIIDSLGREWQ 423 Query: 277 VSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSH 333 +S + ++LP T+ DGK+ M +G++ ++ + Sbjct: 424 MSTIQFD----------FNLPERFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHY 473 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQF 392 G +W +AP ++ +I + + V + +I + G + D D ++ ++ Sbjct: 474 GGAFPVW---LAPLQVIIIPV---NNVVEEYALEILSLFKNEGIRIKLDNDCNMRMNAKI 527 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 P I+G K V + K+ I+ R + L+E + + + N Sbjct: 528 RQYQSKKVPYMFIIGEKEVVEGKISIRTRTNDQINGLELKEALEFVRLKVKN 579 >gi|94499191|ref|ZP_01305729.1| threonyl-tRNA synthetase [Oceanobacter sp. RED65] gi|94428823|gb|EAT13795.1| threonyl-tRNA synthetase [Oceanobacter sp. RED65] Length = 638 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 92/411 (22%), Positives = 156/411 (37%), Gaps = 55/411 (13%) Query: 30 GMIHQHSKG--IYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYD 87 GM+ HSKG IY+ L D + + E Q E+ P + +W +SG +D Sbjct: 262 GMVFWHSKGWTIYNILE------DYMRKKLVEYQYE----EVRAPMVMDVSMWEKSGHWD 311 Query: 88 SYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 Y ++ + + + P + IF +KSYR+LP+ + + R+E Sbjct: 312 KY-QDNIFATESEKRTYAVKPMNCPGHLQIFNQGLKSYRDLPYRMAEFGIVHRNEPSGSL 370 Query: 148 -GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL-KSIPMRAESGPIGGD 205 G+MR R F DA+ F T E K ++ G +++ ++ + P Sbjct: 371 HGLMRVRSFTQDDAHVF-CTEEQILEEVTKCIQMVFDVYKDFGFDQNLSVKLSTRPEKRI 429 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 S E A+ G + + +D+ I F Y + Sbjct: 430 GSDEIWDKAEKGLADALKANE-LDYEIQEGEGAF----------------YGPKIEF--- 469 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAM 322 LFD L R + G I +S+P + A + +G M I G++ Sbjct: 470 TLFDCLD-------RAWQCGTI---QLDFSMPGRLGAQYVDENGDRQTPVMIHRAILGSL 519 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 ++ + G W +AP + ++NI + D +K+ L+K G V D Sbjct: 520 ERFIGILIEHYAGALPTW---LAPTQAMIMNITDNQA---DYVKKVQQTLAKQGFRVDSD 573 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 E+IG + L P ++ G K V+ V ++ R MSLE+ Sbjct: 574 LRNEKIGFKIREHTLQKVPYLLVTGDKEVASDAVAVRTRSGEDLGTMSLED 624 >gi|301779664|ref|XP_002925249.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like [Ailuropoda melanoleuca] Length = 890 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 86/416 (20%), Positives = 157/416 (37%), Gaps = 57/416 (13%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE +R E+ P + ++ LW SG + Y + Sbjct: 503 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNMYNSRLWETSGHWQHYSEN 562 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + IF +S+R +P F + R+EL G+ R Sbjct: 563 MFTF-DIEKDTFALKPMNCPGHCLIFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTR 621 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--GDLSHE 209 R F DA+ F T E + N ++ G S + + P G++ Sbjct: 622 VRRFQQDDAHIF-CTVEQIEEEINGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGEVE-- 677 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 L D E Q+ ++F P + D A Y D+ K+ D Sbjct: 678 ---LWDEAEKQL--QNSLVEFGKPWKMNPGDG------------AFYGPKIDI---KIKD 717 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 ++ + + ++ F Y K D K + V + +G++ + A++ Sbjct: 718 AIGRYHQCATIQLDFQLPIRFNLTY------VSKDGDDKRNPVIIHRAILGSVERMIAIL 771 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD------- 382 ++ GK WP ++P ++ +I + CEK ++S F++ Sbjct: 772 SENYGGK---WPFWLSPRQVMVIPVGP-------TCEKYALQVS----SAFFEEGFMADV 817 Query: 383 --DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D + + A L + ++VG K +++ V ++ R I ++S+ I+ Sbjct: 818 DLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNVRTRDNKIHGEISVTSAID 873 >gi|254489788|ref|ZP_05102983.1| threonyl-tRNA synthetase [Methylophaga thiooxidans DMS010] gi|224464873|gb|EEF81127.1| threonyl-tRNA synthetase [Methylophaga thiooxydans DMS010] Length = 673 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 7/184 (3%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G W G + L + A +R Q + G IE++ P + LW SG + +Y Sbjct: 267 QEEAPGSVFWHHKGWQILQELIAYLRRRQQQEGYIEVNSPDVMDRSLWETSGHWQNYRDH 326 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + ++R ++ SYR+LP + R E G++R Sbjct: 327 MFTTETADGRFFALKPMNCPGSVLLYRQNLTSYRDLPIRMSEFGKVHRYEPSGTLHGLLR 386 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKM-FVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R F DA+ + + + + F+ L ++ +LG I ++ + P IG D + Sbjct: 387 VRHFTQDDAHIYCTQSQMQDECMSAIRFI--LDVYDQLGFHDIKIKLSTRPEHRIGTDET 444 Query: 208 HEFI 211 + + Sbjct: 445 WDLL 448 >gi|71895375|ref|NP_001026618.1| threonyl-tRNA synthetase, cytoplasmic [Gallus gallus] gi|53128235|emb|CAG31282.1| hypothetical protein RCJMB04_4k14 [Gallus gallus] Length = 711 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 84/415 (20%), Positives = 163/415 (39%), Gaps = 57/415 (13%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y + Sbjct: 324 HELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIFNSKLWMTSGHWQHYSEN 383 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + +F +S+R LP + R+EL G+ R Sbjct: 384 MFSF-EVEKEIFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTR 442 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--GDLSHE 209 R F DA+ F + + K + +LR + + S + + P GD Sbjct: 443 VRRFQQDDAHIFCSVEQIEEEI--KSCLQFLRAVYDVFGFSFKLNLSTRPEKYLGD---- 496 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDVH 263 I + + E Q+ EN SLN E+W A Y D+ Sbjct: 497 -IEVWNRAEKQL-------------EN-------SLNDFGEKWELNPGDGAFYGPKIDI- 534 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGA 321 ++ D++ + + ++ F +++L TF DG D V + +G+ Sbjct: 535 --QIKDAIGRYHQCATIQLD----FQLSIRFNL----TFVSHDGNDKTRPVIIHRAILGS 584 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + + A++ ++ GK WP ++P ++ ++ + C + +K+ + G Sbjct: 585 VERMIAILTENYGGK---WPLWLSPQQVMVVPVGP---TCDEYAQKVRQQFHDAGLMADI 638 Query: 382 D-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + ++VG K + V I+ R + + ++ + + Sbjct: 639 DVDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTIADTV 693 >gi|26326983|dbj|BAC27235.1| unnamed protein product [Mus musculus] Length = 722 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 83/415 (20%), Positives = 160/415 (38%), Gaps = 55/415 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y + Sbjct: 334 FHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSE 393 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M ++ + P + +F +S+R LP + R+EL G+ Sbjct: 394 NMFSFEVEKEQFAL-KPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLT 452 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSH 208 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 453 RVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD--- 507 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDV 262 I + + E Q+ EN SLN E+W A Y D+ Sbjct: 508 --IEIWNQAEKQL-------------EN-------SLNEFGEKWELNPGDGAFYGPKIDI 545 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM 322 ++ D++ + + + YF ++ D K V + +G++ Sbjct: 546 ---QIKDAIGRYHQCATIQL------YFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSV 596 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGCDVF 380 + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K D Sbjct: 597 ERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMADTD 650 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D G + + A L + ++VG K + V I+ R + + ++EE + Sbjct: 651 LDP-GCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVEETV 704 >gi|325263251|ref|ZP_08129986.1| threonine--tRNA ligase [Clostridium sp. D5] gi|324031644|gb|EGB92924.1| threonine--tRNA ligase [Clostridium sp. D5] Length = 653 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 5/159 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIR-EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ +P G K + + I EE N G I P + +DL+ SG +D Y M Sbjct: 259 QGLPLLMPKGAKIIQTLQRWIEDEEDNNWGYIRTKTPLMAKSDLYQISGHWDHYKDGMFV 318 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 L D ++ P ++++ KSYR+LP + + FR+E G+ R Sbjct: 319 LGDEETNKEVFALRPMTCPFQYYVYKASQKSYRDLPLRYSETSTLFRNEDSGEMHGLTRV 378 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 R+F + + + + P+ + + LGL+ Sbjct: 379 RQFTISEGHLI-VRPDQMVEEFKGCLALAKKCLTTLGLQ 416 >gi|300767159|ref|ZP_07077071.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494978|gb|EFK30134.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 688 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 2/128 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D++ +SG +D Y ++M Sbjct: 302 GLPYWMPNGATIRRQIERYIIDKEVANGYQHVYTPVLANLDVYKQSGHWDHYREDMFPPM 361 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D + P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 362 DMGDGEQLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALTGLSRVREM 421 Query: 156 LMKDAYSF 163 + D ++F Sbjct: 422 TLNDGHTF 429 Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 10/121 (8%) Query: 302 FKGADGKDHYVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHD 358 + GADG++H M G + M A + + G W +AP ++++I N AH Sbjct: 543 YVGADGEEHRPVMIHRGLVSTMERFVAYLTEIYKGAFPTW---LAPKQVTIIPVNNGAHG 599 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 E + RL+ G V DD E++G + + P ++VG + V++ V + Sbjct: 600 AYA----ETVRRRLAAEGVRVSIDDRNEKMGYKIRESQTKKVPYLLVVGDQEVANGSVSV 655 Query: 419 K 419 + Sbjct: 656 R 656 >gi|20429011|emb|CAC79651.1| threonyl-tRNA synthetase [Oryza sativa Japonica Group] Length = 531 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 88/441 (19%), Positives = 177/441 (40%), Gaps = 47/441 (10%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIR 58 +R K + +L+E A+ H+L+ +T HQ S G +LP G + + +R Sbjct: 122 KRLKEYKHLLEE----AKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLR 177 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 ++ G E+ P + + LW SG +Y KE + + + + P + +F Sbjct: 178 QQYRDRGYQEVLSPNIYNMQLWETSGHAANY-KENMFVFEIEKQEFGLKPMNCPGHCLMF 236 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP + R+EL G+ R R F DA+ F + + Sbjct: 237 EHRVRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVL 296 Query: 178 -FVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 F++Y ++ G K + + GD I + E Q+ ++ +F P + Sbjct: 297 DFINY--VYEIFGFKYELELSTRPEKYLGD-----IETWNKAEQQL--TEALNEFGKPWQ 347 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + D A Y D+ +FD+L + + ++ F YS Sbjct: 348 INEGDG------------AFYGPKIDI---GVFDALKRKFQCATLQLDFQLPLRFKLTYS 392 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 A + V + +G++ + A++ ++GK WP ++P + + +I Sbjct: 393 AEDEAKL------ERPVMIHRAILGSVERMFAILLEHYNGK---WPLWLSPRQAIVCSIS 443 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 ++ + +++ R+ + G V D+ I + A L F ++VG++ + Sbjct: 444 SNSV---EYAKQVRVRIHEAGFHVAIDETDRTIQKKVREAQLAQFKYILVVGAQEAETGQ 500 Query: 416 VEIKHRLTGIREDMSLEEVIN 436 V ++ R +S++++I Sbjct: 501 VSVRVRDKAELATVSIDDIIT 521 >gi|18977723|ref|NP_579080.1| threonyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] gi|22654114|sp|Q8U176|SYT_PYRFU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|18893458|gb|AAL81475.1| threonyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] Length = 625 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 70/325 (21%), Positives = 129/325 (39%), Gaps = 50/325 (15%) Query: 124 SYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYRNLP Y++ + FR E R G+ R R F M D ++ E +K + K F Sbjct: 311 SYRNLPLRMYELTRYSFRREKRGELSGLRRLRAFTMPDMHTLAKDIEQAKDEFKKQFKLS 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 + + +GL D E + ++DF + E+ DF Sbjct: 371 MEVLGGVGLTP----------------------DDYEVAIRFTEDFWN-----EHKDFII 403 Query: 240 --DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 +I ++E W + D+L + +S I+V + FG Sbjct: 404 ELVKLIGKPVLIEMWKQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERFGI----- 458 Query: 298 MSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESS----HDGKGIIWPDSVAPFKISL 351 T+ +G++ Y + + GA+ RV+ A++E +GK ++P ++P ++ + Sbjct: 459 ---TYYDENGEEKYPLILHCSPSGAIERVMYAILEKQAKLMQEGKKPMFPLWLSPIQVRV 515 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 I + D + ++ V DD E++ + A+ P V+VG K Sbjct: 516 IPVSKE---YLDYALYVAGKIEGARIRVDVDDEDERLSKKIRRAEKEWIPYIVVVGEKEK 572 Query: 412 SDSKVEIKHRLTGIREDMSLEEVIN 436 + ++ R G + + +EE+I Sbjct: 573 ETGTITVRRREDGKQYETRIEELIK 597 >gi|289582184|ref|YP_003480650.1| prolyl-tRNA synthetase [Natrialba magadii ATCC 43099] gi|289531737|gb|ADD06088.1| prolyl-tRNA synthetase [Natrialba magadii ATCC 43099] Length = 493 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 71/346 (20%), Positives = 131/346 (37%), Gaps = 76/346 (21%) Query: 80 WVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 WV G +D + RLA R PT E ++ +S+R+LP Q Sbjct: 97 WVTHGGHDELEE---RLAVR--------PTSESIIAPFMADWTRSHRDLPLRLNQWCSVV 145 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 R E R++EF+ ++ ++ T E + Y +++ + +IP+ Sbjct: 146 RWEATETKPFFRTKEFMWQEGHTAHATDESAWEEVWTRLDQYEKVYEE--VLAIPVLRGK 203 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 P H+ ADT ++ +++ + AT Sbjct: 204 KP-----EHDKFPGADT-------------------------TTTVEALMPDGKSVQGAT 233 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 S HN G ++ +F D ++ S+G+ Sbjct: 234 S--HN-------------------------LGQSFAEAFDISFVDEDEEERTAYTTSWGL 266 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE---KIYARLSKVG 376 + R + A+I + D +G++ P ++AP +++++ I ++ D E I L + G Sbjct: 267 -SWRALGALIMTHSDDQGLVLPPTIAPTQVAIVPI-WQEETKADVLEYSQNIADELEEAG 324 Query: 377 CDVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 V DD E+ G +F +L G PL++ +G V D +V + HR Sbjct: 325 FSVELDDRDERNPGFKFNEHELNGVPLRLEIGPYEVEDEEVTLVHR 370 >gi|237808486|ref|YP_002892926.1| threonyl-tRNA synthetase [Tolumonas auensis DSM 9187] gi|259516783|sp|C4LFH3|SYT_TOLAT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|237500747|gb|ACQ93340.1| threonyl-tRNA synthetase [Tolumonas auensis DSM 9187] Length = 642 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 147/397 (37%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR++ E+ P + LW SG +D Y Sbjct: 256 MQEEAPGMVFWHNDGWIIFRELETFIRQKLREYDYEEVKGPFMMDRVLWERSGHWDKYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F + + + Y + G K+I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIFCAENQIQDEVSACIRMVY-DTYSTFGFKNIAVKLSTRPEKRIGSD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E + + + N +FD L + P + L Sbjct: 432 ----EMWDRAE-------EALSAALKHNNIEFD----LQPGEGAFYGPKIEFT------L 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + ++LP + AT+ G D H M I G+M Sbjct: 471 HDCLD-------RAWQCGTV---QLDFALPGRLGATYVGEDNDRHVPVMIHRAILGSMER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++ G +W +AP + ++NI + D +++ L++ G D Sbjct: 521 FIGILTEETAGYFPLW---LAPLQAVVMNITDNQA---DYVKEVVNTLNESGIRAKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K + ++ ++ R Sbjct: 575 NEKIGFKIREHTLKRVPYMLVCGDKEMEAGEIAVRTR 611 >gi|254411303|ref|ZP_05025080.1| threonyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] gi|196181804|gb|EDX76791.1| threonyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] Length = 609 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 3/161 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + +++EQ + G + P + +L+ SG + Y +++ + Sbjct: 224 GLPLWTPKGTILRSTLEDFLKQEQIKRGYQPVVTPHIGRVELFKTSGHWQKYKEDLFPMM 283 Query: 98 DRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ + + + I++ ++SYR+LP + +R E G+ R R F Sbjct: 284 GESEAEGFVLKAMNCPFHVQIYKHELRSYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGF 343 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 DA+ F +TPE + ++ L +F+ LGL+ R Sbjct: 344 TQDDAHLF-VTPEQLDDEFLRVVDLTLSVFNTLGLQDFKAR 383 >gi|13435498|gb|AAH04621.1| Tars protein [Mus musculus] Length = 457 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 85/418 (20%), Positives = 165/418 (39%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 68 FFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 127 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M ++ + P + +F +S+R LP + R+EL G+ Sbjct: 128 ENMFSFEVEKEQFAL-KPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 186 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 187 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 242 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + + E Q+ EN SLN E+W A Y D Sbjct: 243 ---IEIWNQAEKQL-------------EN-------SLNEFGEKWELNPGDGAFYGPKID 279 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 280 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 328 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 329 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 382 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + ++VG K + V I+ R + + ++EE + Sbjct: 383 DTDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVEETV 439 >gi|28378228|ref|NP_785120.1| threonine--tRNA ligase 1 [Lactobacillus plantarum WCFS1] gi|38258333|sp|Q88WU9|SYT_LACPL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|28271063|emb|CAD63968.1| threonine--tRNA ligase 1 [Lactobacillus plantarum WCFS1] Length = 654 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 2/128 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D++ +SG +D Y ++M Sbjct: 268 GLPYWMPNGATIRRQIERYIIDKEVANGYQHVYTPVLANLDVYKQSGHWDHYREDMFPPM 327 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D + P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 328 DMGDGEQLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALTGLSRVREM 387 Query: 156 LMKDAYSF 163 + D ++F Sbjct: 388 TLNDGHTF 395 Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 10/121 (8%) Query: 302 FKGADGKDHYVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHD 358 + GADG++H M G + M A + + G W +AP ++++I N AH Sbjct: 509 YVGADGEEHRPVMIHRGLVSTMERFVAYLTEIYKGAFPTW---LAPKQVTIIPVNNGAHG 565 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 E + RL+ G V DD E++G + + P ++VG + V++ V + Sbjct: 566 AYA----ETVRRRLAAEGVRVSIDDRNEKMGYKIRESQTKKVPYLLVVGDQEVANGSVSV 621 Query: 419 K 419 + Sbjct: 622 R 622 >gi|312217649|emb|CBX97596.1| hypothetical protein [Leptosphaeria maculans] Length = 829 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 13/142 (9%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 +S G LP G + A +R + + G E+ P + LW +SG + +Y ++M Sbjct: 113 YSPGSPLLLPNGAYVFQKLQAFLRAQYPQFGFEEVITPIIYKKSLWEKSGHWQNYAEDMF 172 Query: 95 RLADRNDKAMI----------YG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 + R A I +G P + +FR + SYRNLP + R+E Sbjct: 173 SVQGRGATAEIPQAEAEDNGEFGLKPMNCPGHCILFRDKVMSYRNLPVRYADFSALHRNE 232 Query: 143 LRPRF-GVMRSREFLMKDAYSF 163 + G+ R R F DA+ F Sbjct: 233 ISGALTGLTRVRRFHQDDAHIF 254 >gi|332799217|ref|YP_004460716.1| Prolyl-tRNA synthetase [Tepidanaerobacter sp. Re1] gi|332696952|gb|AEE91409.1| Prolyl-tRNA synthetase [Tepidanaerobacter sp. Re1] Length = 478 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 6/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G G ++ TF DG+ YV S+GI R++ A++ D +G+ Sbjct: 223 GRALQAGTSHNLGQHFAKAYDITFLDQDGQLKYVWQTSWGI-TTRLIGAIVMVHGDDRGL 281 Query: 339 IWPDSVAPFKISLINI-KAHDQVCRDACEKIYARL-SKVGCDVFWDDMGEQI-GSQFAVA 395 P ++AP + ++ I ++ + +I+ +L S+V ++ DD E G +F Sbjct: 282 KIPPTIAPIQAVIVPIFGRQTELVLNKTNEIFTKLKSEVRIEL--DDRDEYTPGWKFNEW 339 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++ G P+++ +G K + +V + R TG + +S E++ Sbjct: 340 EMRGVPVRIEIGPKDIQRQQVVLVRRDTGEKFTVSESELL 379 >gi|302854330|ref|XP_002958674.1| hypothetical protein VOLCADRAFT_84558 [Volvox carteri f. nagariensis] gi|300255999|gb|EFJ40277.1| hypothetical protein VOLCADRAFT_84558 [Volvox carteri f. nagariensis] Length = 446 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 3/144 (2%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R ++ G GT ++ + + K H+V S+G+ + RV+ +I + D KG+ Sbjct: 186 RALQAGTSHNLGTNFAKAFGTQYLNRESKRHFVHQTSWGV-STRVIGGIIMTHGDDKGLR 244 Query: 340 WPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 P +AP + +I I K D+V + + A +KV D + G ++ ++ Sbjct: 245 LPPRLAPVQAVIIPIVKKEEDRVPVNEAAQRLAEAAKVAGIRIDSDERQTPGWKYNYWEM 304 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHR 421 G P++V VG K V R Sbjct: 305 RGVPVRVEVGPKDVQSGTCVTARR 328 >gi|194223978|ref|XP_001498225.2| PREDICTED: threonyl-tRNA synthetase [Equus caballus] Length = 722 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 88/417 (21%), Positives = 164/417 (39%), Gaps = 59/417 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y + Sbjct: 334 FHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIYNSRLWMTSGHWQHYSE 393 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +S+R LP + R+EL G+ Sbjct: 394 NMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRMADFGVLHRNELSGALTGLT 452 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSH 208 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 453 RVRRFQQDDAHIFCAIEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD--- 507 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDV 262 I + + E Q+ EN SLN E+W A Y D+ Sbjct: 508 --IEVWNQAEKQL-------------EN-------SLNEFGEKWVLNPGDGAFYGPKIDI 545 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIG 320 ++ D++ + + ++ F +++L TF DG D V + +G Sbjct: 546 ---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TFVSHDGDDKKRPVIVHRAILG 594 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGCD 378 ++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K D Sbjct: 595 SVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMVD 648 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 V D G + + A L + ++VG K + V I+ R + + +L E I Sbjct: 649 VDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTLSETI 704 >gi|322495387|emb|CBZ30691.1| putative threonyl-tRNA synthetase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 787 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 4/134 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G WLP G + + + +R++ G E+ P + S+ LW+ SG ++ Y Sbjct: 300 FHEVSPGSAFWLPHGARIYNTLVEFLRKKYRCCGFQEVISPNMYSSKLWMVSGHWEKYAD 359 Query: 92 EML-RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M ++ D + P + +F S SY+ LP + + R+EL G+ Sbjct: 360 NMFCTKCEKEDFGL--KPMNCPGHCIMFASQPHSYKELPIRYADFGVLHRNELSGALTGL 417 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 418 TRVRRFQQDDAHIF 431 >gi|302389962|ref|YP_003825783.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] gi|302200590|gb|ADL08160.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] Length = 637 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H+ G + P G + + R+E + G E+ P + + +LW SG +D Y Sbjct: 258 MHEEGPGFPFFHPKGMVLWNTLIDFWRKEHQKRGYQEIKTPIILNEELWKRSGHWDHYKT 317 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +++S + SYR LP ++ L R EL G+M Sbjct: 318 NMY-FTQIDGEGYAIKPMNCPGGILVYKSDVHSYRELPLKLAELGLVHRHELSGVLHGLM 376 Query: 151 RSREFLMKDAYSF 163 R R F DA+ + Sbjct: 377 RVRSFTQDDAHIY 389 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 7/146 (4%) Query: 301 TFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G DG+ H M I G++ ++ + G +W +AP ++ ++ I + Sbjct: 497 TYIGPDGEKHRPVMIHRTIFGSLERFIGILIEHYAGAFPVW---LAPIQVKVLPI---SE 550 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+ A L V D+ E+IG + A L P +IVG K ++ V ++ Sbjct: 551 KFMDYARKVTAELENSDIRVELDERNEKIGYKIREAQLQKIPYMLIVGEKEAAEGTVSVR 610 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R G SL++ I + R N Sbjct: 611 VREKGDVGMKSLKDFIEEVTTRIKNK 636 >gi|194477315|ref|YP_002049494.1| Threonyl-tRNA synthetase, class IIa [Paulinella chromatophora] gi|171192322|gb|ACB43284.1| Threonyl-tRNA synthetase, class IIa [Paulinella chromatophora] Length = 599 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 87/393 (22%), Positives = 146/393 (37%), Gaps = 45/393 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ G + P + LW SG D Y + M Sbjct: 219 GLVFWHPNGARIRLLIEDFWRQSHLEAGYELLYTPHIADIRLWKTSGHLDFYSESMFSPM 278 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 279 QVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 337 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIV 212 DA+ F L PE ++ RI + + P IGGD + Sbjct: 338 TQDDAHIFCL-PEQIGSEVLEVLNLTERILSAFDFTKYEINLSTRPEKFIGGD---DVWD 393 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 LA G + +K++ N D E A Y D+ K+ D++ Sbjct: 394 LATNGLVEALNAKNW--------NYKID---------EGGGAFYGPKIDL---KIKDAIG 433 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIES 331 + S ++ F +Y G+DG M I G++ V+ Sbjct: 434 RTWQCSTIQLDFNLPERFNIEYV--------GSDGSRQRPIMIHRAIFGSLERFFGVMIE 485 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S G W +AP +I L+ + D+V A E++ ++L G D G+++G Sbjct: 486 SCAGDFPFW---LAPEQIRLLPVT--DEVITYA-EELLSQLKIAGVRASIDRTGDRLGKL 539 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + P+ +VG+K ++ R G Sbjct: 540 IRNGEQKKIPILAVVGAKEAEVGGASLRSRYEG 572 >gi|253996955|ref|YP_003049019.1| threonyl-tRNA synthetase [Methylotenera mobilis JLW8] gi|253983634|gb|ACT48492.1| threonyl-tRNA synthetase [Methylotenera mobilis JLW8] Length = 635 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G V +R+ G E+ PT+ LW +SG + +Y M Sbjct: 259 APGMVFWHPRGWSIWQEVEQYMRQMFKSFGYQEVRTPTVMDKTLWEKSGHWQNYRDNMFV 318 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + N + + P + IF + + SYR+LP + R+E G+MR R Sbjct: 319 TSSENREYAV-KPMNCPGHVQIFNNQLHSYRDLPLRLAEFGSCHRNEPSGSLHGLMRVRG 377 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 378 FTQDDAHIF 386 >gi|254503680|ref|ZP_05115831.1| threonyl-tRNA synthetase [Labrenzia alexandrii DFL-11] gi|222439751|gb|EEE46430.1| threonyl-tRNA synthetase [Labrenzia alexandrii DFL-11] Length = 703 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 18/213 (8%) Query: 5 KYFLPILQENPRDAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H KL + H + G+ W P G N+ A R + Sbjct: 284 KGYLHMLEE----AEKRDHRKLGREMNLFHFQEEGPGVVFWHPKGWDIFQNLIAYKRR-R 338 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEM--LRLAD---RNDKAMIYGPTHEEVMTD 116 + E++ P + LW SG + Y M ++ AD +D+ P + + Sbjct: 339 LKDDYKEVNAPQVLHTSLWETSGHWAWYKDNMFSVQCADPESEDDRIFALKPMNCPGHVE 398 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IF+ +KSYR+LP + + R E G+MR R F DA+ F T E Sbjct: 399 IFKHGLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVF-CTEEQMAEECL 457 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 K+ L ++ G + I ++ + P +G D Sbjct: 458 KINDLILSVYEDFGFEEIVVKLSTRPEKRVGSD 490 >gi|145634324|ref|ZP_01790034.1| threonyl-tRNA synthetase [Haemophilus influenzae PittAA] gi|145268304|gb|EDK08298.1| threonyl-tRNA synthetase [Haemophilus influenzae PittAA] Length = 643 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 80/394 (20%), Positives = 146/394 (37%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T + + I+ G +I ++ + P S E Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTRPENRIGSDEM 433 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ G + +++ I F Y + L D Sbjct: 434 WDRAEAGLAAALVH-NGLEYEIQEGEGAF----------------YGPKIEF---ALRDC 473 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 L R + G + ++LP + AT+ D + V + +G++ Sbjct: 474 L-------GREWQCGTV---QLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 +I + G +P +AP + ++NI D +K+ +LS VG V D E+ Sbjct: 524 IITEEYAG---FFPAWLAPTQAVVMNITDSQA---DYVQKVAKQLSDVGLRVKTDLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +G + L P ++ G K +++ KV ++ R Sbjct: 578 VGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRTR 611 >gi|126179985|ref|YP_001047950.1| prolyl-tRNA synthetase [Methanoculleus marisnigri JR1] gi|152112929|sp|A3CX68|SYP_METMJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|125862779|gb|ABN57968.1| prolyl-tRNA synthetase [Methanoculleus marisnigri JR1] Length = 477 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 5/141 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++G + G +S + T++ A+G+ Y YGI + R +AAV+ D KG+ Sbjct: 222 GKTLQIGTVHMLGDHFSRTYAITYEDANGEQQYAYQTCYGI-SERSIAAVVSVHGDDKGL 280 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 + P VAP ++ ++ I K D+V + + A L G V D + G+++ Sbjct: 281 VLPPEVAPLEVVIVPIIVGKRRDEV-LASAAALEAELRGAGFAVKLDARDMRPGAKYYHW 339 Query: 396 DLLGFPLQVIVGSKFVSDSKV 416 ++ G PL+V VG + + + V Sbjct: 340 EMRGVPLRVEVGPRDIDANTV 360 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 5/165 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+Y W P G ++R+ +R A M + + E+ + E+ + Sbjct: 35 KGLYVWYPHGFGIRKRAYGVLRDLMDRDHAETMFPLLIPKTEFMKEAEHIKGFEDEVYWV 94 Query: 97 --ADRN--DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 RN D + PT E + ++ I+S+ +LP YQ+ FR E + ++R Sbjct: 95 THGGRNELDVPLALRPTSETAIYPMYALWIRSHTDLPLRLYQVVNTFRYETKHTRPLIRL 154 Query: 153 REFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 RE K+A++ T E + Y + L + I R Sbjct: 155 REITSFKEAHTVHATREEAAAQVETAIALYREFYDTLRVPVILSR 199 >gi|50419495|ref|XP_458274.1| DEHA2C13706p [Debaryomyces hansenii CBS767] gi|49653940|emb|CAG86351.1| DEHA2C13706p [Debaryomyces hansenii] Length = 682 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 73/342 (21%), Positives = 129/342 (37%), Gaps = 78/342 (22%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 278 DEHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEG 337 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ LT E + ++ Y I+ L ++P +V E + Sbjct: 338 HTAHLTKESAAEEVEQILDLYAGIYEE--LLAVP----------------VVKGKKTENE 379 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F D+ T + I+ + R Sbjct: 380 KFAGGDY--------TTTCEGFIA--------------------------------ETGR 399 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKD----HYVQMGSYGIGAMRVVAAVIESSHDGK 336 GI+ + GT +S + + + +G D H Q S+G+ + RV+ ++ + D K Sbjct: 400 GIQGATSHHLGTNFSKMFNISVENPEGADKPRVHAFQ-NSWGL-STRVIGVMVMTHSDNK 457 Query: 337 GIIWPDSVAPFKISLINI----KAHDQ---VCRDACEKIYARLSKVGCDVFWDDMGE-QI 388 G++ P VA ++ +I + K D+ D I L + V D Sbjct: 458 GLVLPPRVAQTQVVVIPVGLTAKTPDEQRKAINDGAANIEHILKQTDVRVTGDYRDNYSP 517 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 G +F+ +L G PL++ G K ++ +V T +R D S Sbjct: 518 GWKFSNWELKGTPLRLEFGPKDLASEQV------TAVRRDNS 553 >gi|260437371|ref|ZP_05791187.1| threonine--tRNA ligase [Butyrivibrio crossotus DSM 2876] gi|292810283|gb|EFF69488.1| threonine--tRNA ligase [Butyrivibrio crossotus DSM 2876] Length = 651 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 3/128 (2%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G++ + + I +E++ G + P + +DL+ SG +D Y M L Sbjct: 259 QGLPLIMPKGERIIRTLQRWIEDEEDSRGYVRTKTPLMAKSDLYKISGHWDHYKDGMFVL 318 Query: 97 ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D ++ P ++++ KSYR+LP + + FR+E G+ R R Sbjct: 319 GDEEKDKEVFALRPMTCPFQYYVYKASQKSYRDLPLRYGETSTLFRNEDSGEMHGLTRVR 378 Query: 154 EFLMKDAY 161 +F + + + Sbjct: 379 QFTISEGH 386 >gi|254556435|ref|YP_003062852.1| threonine-tRNA ligase 1 [Lactobacillus plantarum JDM1] gi|308180379|ref|YP_003924507.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ST-III] gi|254045362|gb|ACT62155.1| threonine-tRNA ligase 1 [Lactobacillus plantarum JDM1] gi|308045870|gb|ADN98413.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 654 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 2/128 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D++ +SG +D Y ++M Sbjct: 268 GLPYWMPNGATIRRQIERYIIDKEVANGYQHVYTPVLANLDVYKQSGHWDHYREDMFPPM 327 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D + P + I+ HI+SYR LP ++ + R E G+ R RE Sbjct: 328 DMGDGEQLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALTGLSRVREM 387 Query: 156 LMKDAYSF 163 + D ++F Sbjct: 388 TLNDGHTF 395 Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 10/121 (8%) Query: 302 FKGADGKDHYVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHD 358 + GADG++H M G + M A + + G W +AP ++++I N AH Sbjct: 509 YVGADGEEHRPVMIHRGLVSTMERFVAYLTEIYKGAFPTW---LAPKQVTIIPVNNGAHG 565 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 E + RL+ G V DD E++G + + P ++VG + V++ V + Sbjct: 566 AYA----ETVRRRLAAEGVRVSIDDRNEKMGYKIRESQTKKVPYLLVVGDQEVANGSVSV 621 Query: 419 K 419 + Sbjct: 622 R 622 >gi|261368006|ref|ZP_05980889.1| threonine--tRNA ligase [Subdoligranulum variabile DSM 15176] gi|282569994|gb|EFB75529.1| threonine--tRNA ligase [Subdoligranulum variabile DSM 15176] Length = 596 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 2/136 (1%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +LP G + I++++ G + + P + + +L+ SG +D Y + M Sbjct: 213 RGLPMFLPNGYIVWQQLEDYIKQKERERGYLHVMTPCIGTVNLYRTSGHWDHYRENMFPA 272 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P + I+ + SYR LP +I FR E G+ R R F Sbjct: 273 MEMEGESYVLRPMNCPHHMMIYANQPHSYRQLPIRIGEIAHDFRYESSGTLKGIERGRHF 332 Query: 156 LMKDAYSFDLTPEGSK 171 DA+ F +TPE K Sbjct: 333 CQNDAHLF-VTPEQIK 347 >gi|51102318|gb|AAT95872.1| prolyl-tRNA synthetase [Entamoeba moshkovskii] Length = 410 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 87/425 (20%), Positives = 160/425 (37%), Gaps = 75/425 (17%) Query: 24 KLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS-ADLWV 81 ++++++G+I + G Y P +N+ I R G P S A L Sbjct: 2 QIVVQSGLIEYYDISGCYILRPPAYGIWENIQQFIDARIKRMGVENAYFPCFVSQATLKK 61 Query: 82 ESGRYDSYGKEMLRLADRND----KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQL 137 E + + E+ + + + PT E ++ F++ I +R+LP Q Sbjct: 62 EEDELNGFTPEVAWVTKSGQTDLQEPIALRPTSETIIYPAFKNWISGHRDLPMKVNQWCN 121 Query: 138 KFRDELRPRFGVMRSREFLMKDAYS-FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R E + +R+REFL ++ ++ F PE K + M + Y ++ L ++P+ Sbjct: 122 VVRWEFSHPYPFIRTREFLWQEGHTAFSNQPEAEKECHEIMEL-YASVYE--DLLAVPV- 177 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 I G S GET FP A Y Sbjct: 178 -----IRGKKS--------KGET----------FP---------------------GAYY 193 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 + T + +P N R I+ + G +S F+ K S Sbjct: 194 SLTVEC-------IVPTN----GRSIQAATSHHLGQTFSKLFDIEFEDESNKKQLAWQNS 242 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV- 375 +G+ + R + + + D KG++ P A ++ +I + H D + LS++ Sbjct: 243 WGL-STRSIGVTVMTHGDNKGVVIPPRAAQKQVVIITLH-HKGSPNDEMDTKAVELSQLL 300 Query: 376 ---GCDVFWD--DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 G F D DM + G +F+ ++ G P+++ +G + KV I R G + + S Sbjct: 301 LDNGIRAFADTNDM-HKPGWKFSEYEMRGIPIRIELGPRDYDGKKVVIVRRDNGAKTESS 359 Query: 431 LEEVI 435 + ++ Sbjct: 360 WDNLV 364 >gi|30248961|ref|NP_841031.1| thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein [Nitrosomonas europaea ATCC 19718] gi|73919810|sp|Q82VV1|SYT_NITEU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|30138578|emb|CAD84869.1| thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein [Nitrosomonas europaea ATCC 19718] Length = 635 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 5/151 (3%) Query: 17 DAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE H KL + + H + + G+ W P G + +R+ G +E+ P Sbjct: 237 EAEKRDHRKLGKQLDLFHTQEEAPGMVYWHPKGWVVWQQIEQYMRQTLAGNGYVEIRTPQ 296 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + LW SG ++++ + M + + ++ P + +F ++SYR+LP Sbjct: 297 VLDRSLWESSGHWENFRENMF-ITESENRHYAIKPMNCPGHVQVFNHGLRSYRDLPLRLA 355 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + R+E G+MR R F DA+ F Sbjct: 356 EFGSCHRNEASGALHGLMRVRSFTQDDAHIF 386 >gi|301095894|ref|XP_002897046.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4] gi|262108475|gb|EEY66527.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4] Length = 725 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 96/441 (21%), Positives = 173/441 (39%), Gaps = 71/441 (16%) Query: 11 LQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 LQE +A+ H+L+ R M H S G +LP G + + + IR E R G Sbjct: 301 LQE---EAKKRDHRLIGRAQQLFMFHPLSPGSSFFLPHGTRVFNTLADFIRREYRRRGYD 357 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLAD---RNDKAMIYGPTHEEVMTD-------- 116 E+ P + +LW SG +Y +M ++ +D +G TH + Sbjct: 358 EVITPLIFKKELWETSGHLQNYHDDMFMVSQGIATDDACEEHGHTHSHGEEEYDQFGLKP 417 Query: 117 --------IFRSHIK-SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLT 166 +FR K SYR LP R+E G+ R R F DA+ F Sbjct: 418 MNCPGHCLLFREAKKYSYRELPVRLADFSALHRNEASGALTGLTRVRRFHQDDAHIF--C 475 Query: 167 PEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSHEFIVLADTGETQVFCS 224 S + + +++ + + +R + P GDL L D E Q+ + Sbjct: 476 TAAQVQSEMSLALDFIKHVYGIFDFKFNLRLSTRPEKYMGDLE-----LWDDAEDQLRLA 530 Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 D DF P ++ E A Y D+ + D+L + ++ Sbjct: 531 LD--DFGQPW------------TVNEGDGAFYGPKIDI---VVTDALQRQHQCGTIQLD- 572 Query: 285 GHIFYFGTKYSLPMS--ATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 + LP++ + GADG+ H + + +G++ + A++ GK WP Sbjct: 573 ---------FQLPINFELEYDGADGEAHTPIIIHRAVLGSIERMMAILIEHTGGK---WP 620 Query: 342 DSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 ++P +++++ I +AH + + + ++ G V D + + + A + G+ Sbjct: 621 LWLSPRQVAVLPIAEAHREYAYEVASTLQNATAR-GLYVDVQDGSKTLNKRIREAQVAGY 679 Query: 401 PLQVIVGSKFVSDSKVEIKHR 421 ++VG K + +V I+ R Sbjct: 680 NYILVVGDKEQASGEVNIRTR 700 >gi|291395207|ref|XP_002714160.1| PREDICTED: threonyl-tRNA synthetase-like [Oryctolagus cuniculus] Length = 723 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 86/417 (20%), Positives = 164/417 (39%), Gaps = 59/417 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y + Sbjct: 335 FHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIYNSRLWMTSGHWQHYSE 394 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +S+R LP + R+EL G+ Sbjct: 395 NMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRVADFGVLHRNELSGALTGLT 453 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSH 208 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 454 RVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYNVFGFSFKLNLSTRPEKFLGD--- 508 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDV 262 I + + E Q+ EN SLN E+W A Y D+ Sbjct: 509 --IEVWNQAEKQL-------------EN-------SLNEFGEKWELNPGDGAFYGPKIDI 546 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIG 320 ++ D++ + + ++ F +++L TF DG D V + +G Sbjct: 547 ---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TFVSHDGDDKKRPVIIHRAILG 595 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGCD 378 ++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K D Sbjct: 596 SVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMAD 649 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + D G + + A L + ++VG K + V I+ R + + ++ E I Sbjct: 650 IDL-DAGCTLNKKIRNAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTISETI 705 >gi|269216980|ref|ZP_06160834.1| threonine--tRNA ligase [Slackia exigua ATCC 700122] gi|269129787|gb|EEZ60871.1| threonine--tRNA ligase [Slackia exigua ATCC 700122] Length = 587 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 5/165 (3%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 RSK L + +AE H+ + R M+ G WLP G + +++ + Sbjct: 175 RSKEELAEHERMVAEAEKRDHRRIGREMELFMMADEGPGFPFWLPNGMRLKNSLMQYWMD 234 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 Q+ G ++ P + + LW SG +D Y KE + + + + P + I++ Sbjct: 235 MQDAYGYEQVDTPIILNKSLWETSGHWDHY-KENMYTTEIDGEEYAVKPMNCPGACLIYK 293 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 S +SYR+LP + R EL+ G+ R R F DA+ F Sbjct: 294 SKPRSYRDLPLKLAEAGKDHRHELKGALHGLFRVRAFTQDDAHLF 338 >gi|152980466|ref|YP_001353177.1| threonyl-tRNA synthetase [Janthinobacterium sp. Marseille] gi|166223349|sp|A6SY30|SYT_JANMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|151280543|gb|ABR88953.1| threonyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 635 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 3/165 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W P G V +R+ E+ P + LW ++G +D+Y + Sbjct: 256 QEEAPGLIFWHPKGWSIWQQVEQYMRKVYQDNDYQEVKAPQILDRGLWEKTGHWDNYREN 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + +++ P + I+ S ++SYR+LP + + R+E G+MR Sbjct: 316 MF-VTESENRSYALKPMNCPGHVQIYNSDMRSYRDLPLRYGEFGQCHRNEPSGALHGMMR 374 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R F D + F T E + ++ G ++I ++ Sbjct: 375 VRGFTQDDGHIF-CTEEQIAEEVTAFHAQAMAVYAAFGFENIDVK 418 >gi|310796349|gb|EFQ31810.1| threonyl-tRNA synthetase [Glomerella graminicola M1.001] Length = 791 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 17/165 (10%) Query: 15 PRDAEIASHKLMLRTG---------------MIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 P E+A+HK L H+ S G WLP G + + + A I+E Sbjct: 306 PSKKELAAHKKWLEEAAARDHRKLGQDQQLFFFHELSPGSAMWLPHGARIYNTLLAYIKE 365 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 + + E+ P + +A+LW SG +D Y +M + D + + P + +F Sbjct: 366 QYFKRDYHEVISPNMYNAELWKISGHWDHYKDDMF-VIDVDKEKFGLKPMNCPGHCLMFA 424 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 K+Y LP+ + R+E G+ R R F DA+ F Sbjct: 425 HTPKAYHQLPWRVADFGVLHRNEASGALSGLTRVRRFQQDDAHIF 469 >gi|219684484|ref|ZP_03539428.1| threonyl-tRNA synthetase [Borrelia garinii PBr] gi|219672473|gb|EED29526.1| threonyl-tRNA synthetase [Borrelia garinii PBr] Length = 593 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 77/409 (18%), Positives = 156/409 (38%), Gaps = 51/409 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG D Y M Sbjct: 217 GLIFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHVGKSWLWQTSGHLDFYKDSMFEKI 276 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 277 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGMMRARGFT 336 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ T ++ + ++ + G S+ + P +G D E Sbjct: 337 QDDAHII-CTHSQVVDEIKEVLRFAIYMWSKFGFSSLKAYLSTKPDKSVGNDYDWEM--- 392 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + +F +P E I + A Y D+ K+ DSL Sbjct: 393 -----SLKVLEEALSNFEVPYE------------IDKGGGAFYGPKIDL---KIVDSLER 432 Query: 274 NKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIE 330 ++S + ++LP + T+ DGK+ M +G++ ++ Sbjct: 433 EWQMSTIQFD----------FNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILV 482 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G +W ++P + +I + + D K+ + G + D+ ++ + Sbjct: 483 EHYGGAFPLW---LSPVQAVIIPV---NNTVEDYTIKVLNKFKNAGIRIKLDNSSSRMNA 536 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR----LTGIREDMSLEEVI 435 + P I+G + + K+ I+ R + GI D +L+ ++ Sbjct: 537 KIREYQAKKIPYMFIIGEREAIEEKISIRTRTNEQINGIELDEALKLIL 585 >gi|227908819|ref|NP_758514.2| probable threonyl-tRNA synthetase 2, cytoplasmic [Mus musculus] gi|81896660|sp|Q8BLY2|SYTC2_MOUSE RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; AltName: Full=Threonyl-tRNA synthetase-like protein 2 gi|26334063|dbj|BAC30749.1| unnamed protein product [Mus musculus] Length = 790 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 88/416 (21%), Positives = 163/416 (39%), Gaps = 59/416 (14%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y Sbjct: 403 HDLSPGSCFFLPRGAFIYNALMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNN 462 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 463 MFTF-DVEKDTFALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLSGLTR 521 Query: 152 SREFLMKDAYSFDLTPE------GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 R F DA+ F + + G H ++ ++ F +L L + P G+ Sbjct: 522 VRRFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGFSF-QLNLSTRPEH-----FLGE 575 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 I + D E Q+ ++F P + D A Y D+ Sbjct: 576 -----IEIWDEAERQL--QNSLVEFGKPWKINPGDG------------AFYGPKIDI--- 613 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 K+ D++ + + ++ F +++L + K D K+ V + +G++ + Sbjct: 614 KIKDAIGRYHQCATIQLD----FQLPIRFNLTYVS--KDGDDKNRPVIIHRAILGSVERM 667 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG------CDV 379 A++ ++ GK WP ++P ++ +I + ACE ++SK DV Sbjct: 668 IAILSENYGGK---WPLWLSPRQVMVIPVGP-------ACENYALQVSKECFEEGFMADV 717 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD + + A L + ++VG K ++ V ++ R I ++S+ VI Sbjct: 718 DLDDSC-TLNKKIRNAQLAQYNFILVVGEKEKINNAVNVRTRDNKIHGEISIASVI 772 >gi|24657723|gb|AAH39225.1| Threonyl-tRNA synthetase-like 2 [Mus musculus] Length = 790 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 88/416 (21%), Positives = 163/416 (39%), Gaps = 59/416 (14%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y Sbjct: 403 HDLSPGSCFFLPRGAFIYNALMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNN 462 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 463 MFTF-DVEKDTFALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLSGLTR 521 Query: 152 SREFLMKDAYSFDLTPE------GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 R F DA+ F + + G H ++ ++ F +L L + P G+ Sbjct: 522 VRRFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGFSF-QLNLSTRPEH-----FLGE 575 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 I + D E Q+ ++F P + D A Y D+ Sbjct: 576 -----IEIWDEAERQL--QNSLVEFGKPWKINPGDG------------AFYGPKIDI--- 613 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 K+ D++ + + ++ F +++L + K D K+ V + +G++ + Sbjct: 614 KIKDAIGRYHQCATIQLD----FQLPIRFNL--TYVSKDGDDKNRPVIIHRAILGSVERM 667 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG------CDV 379 A++ ++ GK WP ++P ++ +I + ACE ++SK DV Sbjct: 668 IAILSENYGGK---WPLWLSPRQVMVIPVGP-------ACENYALQVSKECFEEGFMADV 717 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD + + A L + ++VG K ++ V ++ R I ++S+ VI Sbjct: 718 DLDDSC-TLNKKIRNAQLAQYNFILVVGEKEKINNAVNVRTRDNKIHGEISIASVI 772 >gi|256113621|ref|ZP_05454441.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|265994988|ref|ZP_06107545.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|262766101|gb|EEZ11890.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] Length = 658 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 235 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL---ADRNDKAMIYG--PTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ D D ++ P + IF Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDHVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLQI 409 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 410 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 440 >gi|169828188|ref|YP_001698346.1| threonyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] gi|168992676|gb|ACA40216.1| Threonyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41] Length = 637 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 5/166 (3%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 KYF+ + + R+ +L L M + + G+ +L GQ + + + +R Q + Sbjct: 231 QKYFVFLEEAEKRNHRKLGKELSL--FMFSEEAPGMPFYLANGQILRNELESYLRNLQAK 288 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + + LW +SG +D Y K+ + ++++ P + IF++++ Sbjct: 289 YDYQEVRTPLMMNQRLWEQSGHWDHY-KDNMYFTQVDNQSFALKPMNCPGHMLIFKNNLH 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 SYR+LP + R E G++R R F DA+ F TP+ Sbjct: 348 SYRDLPIRMAEFGQVHRHEFSGALNGLLRVRSFCQDDAHIF-ATPQ 392 >gi|134100182|ref|YP_001105843.1| putative threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291006599|ref|ZP_06564572.1| putative threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133912805|emb|CAM02918.1| putative threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 405 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + IR+ + R G + P L +L+ SG +D Y +M Sbjct: 23 GLPYWLPDGALVRHTLEEYIRDAERRAGYQHVYSPVLGKRELYEISGHWDHYRDDMFPPM 82 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++ P+ I+RS SYR LP ++ +R EL G+ R R Sbjct: 83 RLGAEQVVLRPSLCPHHALIYRSRSHSYRELPLRMAELGGMYRSELSGVLGGLTRVRAIH 142 Query: 157 MKDAYSF 163 + DA+ F Sbjct: 143 LNDAHIF 149 >gi|148671336|gb|EDL03283.1| threonyl-tRNA synthetase, isoform CRA_a [Mus musculus] Length = 544 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 85/418 (20%), Positives = 165/418 (39%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 155 FFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 214 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M ++ + P + +F +S+R LP + R+EL G+ Sbjct: 215 ENMFSFEVEKEQFAL-KPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 273 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 274 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 329 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + + E Q+ EN SLN E+W A Y D Sbjct: 330 ---IEIWNQAEKQL-------------EN-------SLNEFGEKWELNPGDGAFYGPKID 366 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 367 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 415 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 416 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 469 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + ++VG K + V I+ R + + ++EE + Sbjct: 470 DTDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVEETV 526 >gi|46202001|ref|ZP_00053978.2| COG0442: Prolyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 500 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 57/258 (22%), Positives = 101/258 (39%), Gaps = 61/258 (23%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ D F I+SYR+LP Q R E+RPR +R+ EFL ++ Sbjct: 116 EEPLVVRPTSETIIGDAFARWIQSYRDLPMLVNQWANVVRWEMRPRI-FLRTAEFLWQEG 174 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E + +M Y R+ L ++P+ +G +HE Sbjct: 175 HTAHATAEEAMEETLRMLEVY-RVMSEEVL-AMPVI-----VGEKPAHE----------- 216 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 FP D S+ ++++ A A TS Sbjct: 217 --------RFP------GADKTYSIEAMMQDGKALQAGTS-------------------- 242 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 + G +S + ++ A G + + S+G+ + R++ VI S D G+ Sbjct: 243 -------HFLGQHFSKAQNIRYQTAQGGEEFCFTTSWGV-STRLIGGVIMSHADDNGLRV 294 Query: 341 PDSVAPFKISLINIKAHD 358 P +AP +I + I D Sbjct: 295 PPRIAPKQIVFVPITRAD 312 >gi|257064333|ref|YP_003144005.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Slackia heliotrinireducens DSM 20476] gi|256791986|gb|ACV22656.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Slackia heliotrinireducens DSM 20476] Length = 586 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 5/140 (3%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M G WLP G K + + + + E+ P + S LW SG +D Y Sbjct: 206 MFADEGPGFPFWLPNGTKLKNALIEYWHDMMAKYNYDEVETPQILSRKLWETSGHWDHYK 265 Query: 91 KEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M + D D A+ P + I++S +SYR+LP + L R EL+ G Sbjct: 266 ENMYTTVIDEEDYAV--KPMNCPGACLIYKSRPRSYRDLPLKLAEAGLDHRHELKGALHG 323 Query: 149 VMRSREFLMKDAYSFDLTPE 168 + R R F D + + +TPE Sbjct: 324 LFRVRAFTQDDGHIY-VTPE 342 >gi|28211584|ref|NP_782528.1| histidyl-tRNA synthetase [Clostridium tetani E88] gi|32130099|sp|Q892X7|SYH_CLOTE RecName: Full=Histidyl-tRNA synthetase; AltName: Full=Histidine--tRNA ligase; Short=HisRS gi|28204025|gb|AAO36465.1| histidyl-tRNA synthetase [Clostridium tetani E88] Length = 439 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 103/443 (23%), Positives = 178/443 (40%), Gaps = 67/443 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G LP Q + + IR + G I + PT++ +++ + G ++ K++ R Sbjct: 13 GFMELLPADQIVFNKMKDTIRHNYEKFGFIPLDTPTIEKSEILLAKGGGET-EKQIYRFN 71 Query: 98 DRN-DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 N D ++ + T V + S S N PF Y I FR E R + G R REF Sbjct: 72 KGNTDLSLRFDLT---VPLARYVSQHFSDLNFPFRRYHISKVFRGE-RNQKG--RFREFY 125 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYL--RIFHRLGLKSIPMRAESGPI------GGDLSH 208 D D+ GS N + + + F LG + +R + + G D+ Sbjct: 126 QCD---IDIIGNGSLSIINDAEIPSIIYQTFKELGFEDFTIRINNRKVLNGFFEGTDVED 182 Query: 209 EFIVL------ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-------------- 248 VL GE V K+ + + E++ D II+ +I Sbjct: 183 RKGVLRAIDKIEKIGEDGV--RKELQELGL--EDSKIDKIINFINIKGTKSEVIKSLKEL 238 Query: 249 -VEQ---WTAPYAATSDVHNEKLFDSLPENKRVS---ARGIEVGHIFYFGTKYSLPMS-- 299 +E Y VH K F+ +N ++ ARG++ +Y GT Y ++ Sbjct: 239 DIENDVFKEGVYELEKVVHYIKSFNVPDKNYKIDLTIARGLD----YYTGTVYETVLNNY 294 Query: 300 ----ATFKGA---DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 + G + +HY G+G + + + K II ++ + +L+ Sbjct: 295 PQIGSVCSGGRYDNLAEHYTNQKLPGVGISIGLTRLFYQLREAK-IIGENASSTLSQALV 353 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 I D + R +++ +++ +D +IG +FA AD L P +++G + Sbjct: 354 -IPVGDTMEYSIKVANKLRENEIISELYLEDA--KIGKKFAYADKLKIPYVILIGEDELK 410 Query: 413 DSKVEIKHRLTGIREDMSLEEVI 435 + KV +K+ TG +E MSLEE I Sbjct: 411 EEKVSVKNMETGNQESMSLEEAI 433 >gi|303248736|ref|ZP_07334989.1| threonyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] gi|302489901|gb|EFL49829.1| threonyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] Length = 647 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 2/125 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G+ + R E R G + P + +LW SG YD+Y +E + Sbjct: 262 GMPIWHPKGELIRTILEDFERREHLRRGYQLVRGPLILRRELWERSGHYDNY-RENMYFT 320 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + +A P + I++S ++SYR+LP ++++ + R E G+MR R+F Sbjct: 321 EIDGQAYGIKPMNCLSHMLIYKSRVRSYRDLPQRYFELGVVHRHEKSGVLHGLMRVRQFT 380 Query: 157 MKDAY 161 DA+ Sbjct: 381 QDDAH 385 >gi|300311294|ref|YP_003775386.1| threonyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi|300074079|gb|ADJ63478.1| threonyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 635 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 9/161 (5%) Query: 7 FLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W P G V +R Sbjct: 231 YLHMLEE----AEKRDHRKLGRALDLFHFQDEAPGLIFWHPKGWTIWQQVEQYMRRVYQD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW ++G +++Y + M N +A P + IF S + Sbjct: 287 NGYQEVKAPQILDRSLWEKTGHWENYRENMFTTESEN-RAYALKPMNCPGHIQIFNSGLH 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP + + R+E G+MR R F D + F Sbjct: 346 SYRDLPLRYGEFGQCHRNEPSGALHGMMRVRGFTQDDGHIF 386 >gi|189501728|ref|YP_001957445.1| prolyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2] gi|259511573|sp|B3ER64|SYP_AMOA5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189497169|gb|ACE05716.1| hypothetical protein Aasi_0277 [Candidatus Amoebophilus asiaticus 5a2] Length = 491 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 77/160 (48%), Gaps = 5/160 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G +++ TF G+ YV S+G+ R++ A++ + D KG++ Sbjct: 234 KALQAGTSHFLGQRFAKAFEVTFTNQAGQLDYVWGTSWGL-TTRLIGALVMTHSDDKGLV 292 Query: 340 WPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVA 395 P VAP +I +I I + + + + I +L D E + G +FA Sbjct: 293 LPPRVAPIQIVIIPIYRTQEEKEAIQQQAQHIQQQLIAHNISAKLDGRDEHKPGWKFAEY 352 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +L G P+++ +G ++++ VE+ R T + + + +I Sbjct: 353 ELKGVPIRMAIGPNDLANNTVELTRRDTSEKTTVPTDNII 392 >gi|51598972|ref|YP_073160.1| threonyl-tRNA synthetase [Borrelia garinii PBi] gi|73919774|sp|Q660F3|SYT_BORGA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|51573543|gb|AAU07568.1| threonyl-tRNA synthetase [Borrelia garinii PBi] Length = 582 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 77/409 (18%), Positives = 155/409 (37%), Gaps = 51/409 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G K + REE ++ G + P + + LW SG + Y M Sbjct: 205 GLIFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHVGKSWLWQTSGHLNFYKDSMFEKI 264 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+ + SYR+LPF + ++ +R +++ G+MR+R F Sbjct: 265 EMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGMMRARGFT 324 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ T ++ + ++ + G S+ + P +G + Sbjct: 325 QDDAHII-CTHSQVVDEIKEVLRFAIYMWSKFGFNSLKAYLSTKPDKSVGNN-------- 375 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 +D + + DF +P E I + A Y D+ K+ DSL Sbjct: 376 SDWEMSLKVLKEALSDFEVPYE------------IDKGGGAFYGPKIDL---KIVDSLER 420 Query: 274 NKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIE 330 ++S + ++LP + T+ DGK+ M +G++ ++ Sbjct: 421 EWQMSTIQFD----------FNLPERFNMTYTSEDGKEKRPFMIHRALLGSIERFFGILV 470 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G +W V I + NI D K++ + G + D+ ++ + Sbjct: 471 EHYGGAFPLWLSHVQAVIIPVNNI------VEDYTIKVFNKFKNAGIRIKLDNSSSRMNA 524 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR----LTGIREDMSLEEVI 435 + P I+G + + ++ I+ R + GI D +L+ ++ Sbjct: 525 KIREYQAKKIPYMFIIGEREAIEERISIRTRTNEQINGIELDEALKLIL 573 >gi|50555740|ref|XP_505278.1| YALI0F11231p [Yarrowia lipolytica] gi|49651148|emb|CAG78085.1| YALI0F11231p [Yarrowia lipolytica] Length = 755 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + + S G WLP G + + ++R+E + G E+ P + ++ LW SG + +Y Sbjct: 353 LFNDMSPGSCFWLPHGARIYSALTDLLRKEYRKRGYEEVITPNMYNSKLWETSGHWQNYK 412 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +M +K + P + +F++ +SY+ LP+ + R+E G+ Sbjct: 413 DDMFTFEIEKEKFGL-KPMNCPGHCLMFKARDRSYKELPWRVADFGVIHRNEASGALTGL 471 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 472 TRVRRFQQDDAHIF 485 >gi|50294994|ref|XP_449908.1| hypothetical protein [Candida glabrata CBS 138] gi|49529222|emb|CAG62888.1| unnamed protein product [Candida glabrata] Length = 726 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + ++ S G WLP G + + + ++R E + G E+ P + ++ LW SG + +Y Sbjct: 332 LFNEMSPGSCFWLPHGTRIYNTLVDLLRSEYRKRGYEEVITPNMYNSKLWETSGHWANYK 391 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F++ +SYR LP+ + R+E G+ Sbjct: 392 ENMFTF-EVEKETFGLKPMNCPGHCLMFKARERSYRELPWRVADFGVIHRNEFSGALSGL 450 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 451 TRVRRFQQDDAHIF 464 >gi|317047868|ref|YP_004115516.1| threonyl-tRNA synthetase [Pantoea sp. At-9b] gi|316949485|gb|ADU68960.1| threonyl-tRNA synthetase [Pantoea sp. At-9b] Length = 642 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 83/398 (20%), Positives = 144/398 (36%), Gaps = 50/398 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQVRDEVNSCIRMVYDMYSTFGFEKIVVKLSTRPEKRIGTD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-K 266 + D E D + + N I ++ A E Sbjct: 432 ----EMWDRAE------------------VDLAEALKENQIPFEYQPGEGAFYGPKIEFT 469 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMR 323 L D L R + G + +SLP + AT+ G + M I G+M Sbjct: 470 LHDCLD-------RAWQCGTV---QLDFSLPKRLDATYVGENNDRQTPVMIHRAILGSME 519 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ G +P +AP + ++NI + ++ +L G V D Sbjct: 520 RFIGILTEEFAG---FFPSWLAPVQAVVMNITDSQA---EYVSELTKKLQNAGIRVKADL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+IG + L P ++ G K V KV ++ R Sbjct: 574 RNEKIGFKIREHTLRRVPYMLVCGEKEVEAGKVAVRTR 611 >gi|315122407|ref|YP_004062896.1| threonyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495809|gb|ADR52408.1| threonyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 653 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 15/212 (7%) Query: 4 SKYFLPILQENPRD-AEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y I++ RD +IA + T + G+ W G K + + +R + Sbjct: 232 TQYLDFIVESEKRDHRKIAREMDLFHTA---EDGSGVIFWHQKGWKTFQTLISYMRR-KI 287 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEM--LRLAD---RNDKAMIYGPTHEEVMTDI 117 + E++ P + +LW +SG +D Y M ++ AD ++ ++ P + +I Sbjct: 288 KDDYEEINTPQVLDQNLWKQSGHWDWYRANMFAVQCADETIKDLRSFALKPMNCPGHVEI 347 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 F+ +KSYR LP + +R+E G+MR R F DA+ F T E K Sbjct: 348 FKHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFEECLK 406 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 + + I+ G ++I ++ + P +G D Sbjct: 407 IHNLIVSIYKDFGFENITVKLSTRPEKRVGSD 438 >gi|322391061|ref|ZP_08064565.1| serine--tRNA ligase [Streptococcus parasanguinis ATCC 903] gi|321142291|gb|EFX37765.1| serine--tRNA ligase [Streptococcus parasanguinis ATCC 903] Length = 446 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ EE + G E+ P + Sbjct: 175 RGAKVTGARFLFYKGLGARLERAIYNFM--------------LEEHGKEGYTEVIPPYMV 220 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 221 NHDSMFGTGQYPKFKEDTFELSDTN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 277 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM V+ I +L L Sbjct: 278 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYDELEKMVVNAENILQKLNL- 335 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 336 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 366 >gi|261407942|ref|YP_003244183.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261284405|gb|ACX66376.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 485 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 6/150 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y GT +S + + Y S+G+ + R++ ++I D +G+ Sbjct: 228 GRAVQAGTSHYMGTNFSQAFDIQYLNRENTLEYAHTTSWGV-STRLIGSLIMVHGDDRGL 286 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAV 394 + P VAP ++ +I I K D V ++++ L G V DD + + G +F Sbjct: 287 VLPPKVAPTQVIMIPIGPPKTRDAVV-GRTDELFRELKSAGIRVRVDDNPDVRPGWKFNE 345 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ G P+++ +G + + + + R+TG Sbjct: 346 YEMRGVPVRLEIGPRDMENGVCVLVSRITG 375 >gi|77164649|ref|YP_343174.1| threonyl-tRNA synthetase, class IIA [Nitrosococcus oceani ATCC 19707] gi|123757888|sp|Q3JC02|SYT_NITOC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|76882963|gb|ABA57644.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] Length = 644 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P+G + + +E G + P + +LW SG D Y + M + Sbjct: 262 GLVFWHPMGARIRRVIEDFWQERHTAAGYEMLYTPHIAHEELWQTSGHTDFYRESMYQPM 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + + P + I++ ++SYR LP + ++ +R E+ G+MR R F Sbjct: 322 EDDHQLYQLKPMNCPFHVLIYQGRLRSYRELPIRWAELGTVYRHEMSGALHGLMRVRGFT 381 Query: 157 MKDAYSF 163 DA+ F Sbjct: 382 QDDAHIF 388 >gi|160946146|ref|ZP_02093357.1| hypothetical protein PEPMIC_00108 [Parvimonas micra ATCC 33270] gi|158447669|gb|EDP24664.1| hypothetical protein PEPMIC_00108 [Parvimonas micra ATCC 33270] Length = 648 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 4/169 (2%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q+ G+ WLP G V I +++ G + P L + DL+ SG +D Y Sbjct: 257 MISQNVGAGLPFWLPKGATIRRVVERYIVDKEIECGYEHVYTPILANVDLYKTSGHWDHY 316 Query: 90 GKEMLRLADR-NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 M D N + ++ P + +I+ + + SY+ P ++ + R E+ Sbjct: 317 QDSMFPPMDLGNGELLVLRPMNCPHHMEIYNNDVHSYKEFPIRIAELGMMHRYEMSGTLS 376 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 G+ R RE + DA+ F + P+ K + ++ ++ +K+ R Sbjct: 377 GLQRVREMTLNDAHIF-VRPDQIKEEFTRVVNLMKSVYEDFDIKNFRFR 424 Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 10/139 (7%) Query: 301 TFKGADGKD-HYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ G DGK+ H + GI + R VA +IE KG +P +AP ++ ++ I Sbjct: 505 TYVGEDGKNTHRPVVIHRGIVSTMERFVAYLIEEY---KGA-FPTWLAPEQVKILPISDK 560 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D ++ +K V DD E+IG + A L P +IVG V++ V Sbjct: 561 ---FNDYAYELQKEFAKKDIRVAVDDRTEKIGLKIREAQLAKIPYSLIVGENEVNERTVS 617 Query: 418 IKHRLTGIREDMSLEEVIN 436 ++ R G + M E ++ Sbjct: 618 VRKRGEGDKGSMKFEAFLD 636 >gi|86742942|ref|YP_483342.1| prolyl-tRNA synthetase [Frankia sp. CcI3] gi|114152196|sp|Q2J529|SYP_FRASC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|86569804|gb|ABD13613.1| prolyl-tRNA synthetase [Frankia sp. CcI3] Length = 468 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 3/146 (2%) Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G ++ F GADG H S+G + R+V +I + D G+ P +AP ++ Sbjct: 230 LGQNFARAFDIDFLGADGARHLAWTTSWGC-STRMVGGLIMAHGDDNGLRVPPRLAPTQV 288 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGS 408 ++ ++ + V A +I A L+ G V D G G + A++ G P++V VG Sbjct: 289 VVLPVRDEETVVAKA-RQIAAALTDAGLRVQVDARPGLSFGRRVTDAEIKGIPVRVEVGP 347 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEV 434 + ++ V + R T + + L EV Sbjct: 348 RDLAAGNVTLVRRDTSEKVPVPLAEV 373 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 8/73 (10%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GKE+ ++ ++ PT E V+ + +SYR+LP Q R ELRPR Sbjct: 96 GKEL-------EEPVVVRPTSETVIGEYLAKWTQSYRDLPLLLNQWANVVRWELRPRL-F 147 Query: 150 MRSREFLMKDAYS 162 +RS EFL ++ ++ Sbjct: 148 LRSSEFLWQEGHT 160 >gi|55379994|ref|YP_137844.1| threonyl-tRNA synthetase [Haloarcula marismortui ATCC 43049] gi|55232719|gb|AAV48138.1| threonyl-tRNA synthetase [Haloarcula marismortui ATCC 43049] Length = 672 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G+K L+ ++ + G E+ P + +LW +SG Y++Y +M L Sbjct: 292 GLPLYEPNGKKILNELSDYVAGLNRDAGYDEVETPHVFRTELWKKSGHYENYVDDMF-LL 350 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D ND+ P + IF + SYR+LP +++ +R E R G+ R+ F Sbjct: 351 DVNDEEYGLKPMNCPGHATIFEQNSWSYRDLPVRYFEDGKVYRKEQRGELSGLSRTWAFT 410 Query: 157 MKDAYSF 163 + D + F Sbjct: 411 IDDGHLF 417 >gi|332970051|gb|EGK09049.1| proline--tRNA ligase [Desmospora sp. 8437] Length = 488 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 5/160 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G ++ F D + YV S+G + R++ ++I D +G+ Sbjct: 225 GKAVQAGTSHYLGENFAKGFDIKFLDRDNQLKYVHTTSWGT-STRLIGSMIMVHGDDRGL 283 Query: 339 IWPDSVAPFKISLI---NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 P VAP ++ +I +K ++V + + ++ L G V D E G +F Sbjct: 284 ALPPRVAPTQVVMIPVGPVKLREKVM-ERFDPLFDDLQAAGVRVRADLREETPGWKFNEW 342 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++ G PL++ +G + V +V + R TG + +++++ + Sbjct: 343 EMRGVPLRLEIGPRDVDKGEVVLARRDTGEKMAVAIDQAV 382 >gi|260888481|ref|ZP_05899744.1| threonine--tRNA ligase [Selenomonas sputigena ATCC 35185] gi|330838210|ref|YP_004412790.1| threonyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] gi|260861678|gb|EEX76178.1| threonine--tRNA ligase [Selenomonas sputigena ATCC 35185] gi|329745974|gb|AEB99330.1| threonyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] Length = 593 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 9/157 (5%) Query: 16 RDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 +DA+ HK + L M + + G+ WLP G K + + R G E+S P Sbjct: 177 KDAQERDHKKIGPQLDLFMFDETAPGMPYWLPRGWKLFNALLEFWRGIHEAHGYQEVSAP 236 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRN---DKAMIYGPTHEEVMTDIFRSHIKSYRN 127 + + LWV SG + Y + M + AD + D P + I++ +SYR+ Sbjct: 237 VINNKRLWVTSGHWAHYKENMFLIPGADGDIEADDTFAIKPMNCPNAIKIYQRKTRSYRD 296 Query: 128 LPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 LP + + + R E G+ R + F D ++F Sbjct: 297 LPIRYNTVDVIHRKEKSGELNGLFRVQLFRQDDDHTF 333 >gi|296135845|ref|YP_003643087.1| threonyl-tRNA synthetase [Thiomonas intermedia K12] gi|295795967|gb|ADG30757.1| threonyl-tRNA synthetase [Thiomonas intermedia K12] Length = 639 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W P G V +R+ +G E+ P + LW SG +D+Y + Sbjct: 256 QEEAPGLAFWHPKGWALWQAVEQYMRQVYRDSGYQEVKGPQILDVSLWKRSGHWDNYSEN 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + IF S ++SYR+LP + + R+E G++R Sbjct: 316 MF-FTESEKRQFAVKPMNCPGHIQIFNSGLRSYRDLPIRYGEFGSCHRNEPSGALHGLLR 374 Query: 152 SREFLMKDAYSF 163 R F D + F Sbjct: 375 VRGFTQDDGHIF 386 >gi|329929336|ref|ZP_08283089.1| proline--tRNA ligase [Paenibacillus sp. HGF5] gi|328936705|gb|EGG33148.1| proline--tRNA ligase [Paenibacillus sp. HGF5] Length = 485 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 6/150 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y GT +S + + Y S+G+ + R++ ++I D +G+ Sbjct: 228 GRAVQAGTSHYMGTNFSQAFDIQYLNRENTLEYAHTTSWGV-STRLIGSLIMVHGDDRGL 286 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAV 394 + P VAP ++ +I I K D V ++++ L G V DD + + G +F Sbjct: 287 VLPPKVAPTQVIMIPIGPPKTRDAVV-GRTDELFRELKSAGIRVRVDDNPDVRPGWKFNE 345 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ G P+++ +G + + + + R+TG Sbjct: 346 YEMRGVPVRLEIGPRDMENGVCVLVSRITG 375 >gi|167855812|ref|ZP_02478565.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755] gi|167853091|gb|EDS24352.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755] Length = 643 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 78/394 (19%), Positives = 144/394 (36%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +YG Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F + PE + I+ G ++I ++ + P + E Sbjct: 375 RVRGFTQDDAHIFCM-PEQVESEVTSCIKMVYDIYSTFGFENIQVKLSTRPANSIGTDEM 433 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ + + + + F I F Y + D Sbjct: 434 WNKAE-ADLAAALTANGLAFEIQEGEGAF----------------YGPKIEFALRDCLD- 475 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 R + G I + LP +SA++ D M I G++ Sbjct: 476 ---------REWQCGTI---QLDFFLPERLSASYVAEDNNRKTPVMIHRAILGSIERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 +I + G +P +AP + ++NI + +++ +LS G V D E+ Sbjct: 524 IITEEYAG---FFPAWLAPVQAVVMNITDSQA---EYVQQVVKQLSDAGLRVKADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +G + L P ++ G K +++ KV ++ R Sbjct: 578 VGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTR 611 >gi|73919796|sp|Q5UX65|SYT_HALMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 642 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G+K L+ ++ + G E+ P + +LW +SG Y++Y +M L Sbjct: 262 GLPLYEPNGKKILNELSDYVAGLNRDAGYDEVETPHVFRTELWKKSGHYENYVDDMF-LL 320 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D ND+ P + IF + SYR+LP +++ +R E R G+ R+ F Sbjct: 321 DVNDEEYGLKPMNCPGHATIFEQNSWSYRDLPVRYFEDGKVYRKEQRGELSGLSRTWAFT 380 Query: 157 MKDAYSF 163 + D + F Sbjct: 381 IDDGHLF 387 >gi|317403269|gb|EFV83787.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans C54] Length = 650 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 10/176 (5%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G V +R G E+ P + LW ++G +D+Y + M Sbjct: 264 APGLIFWHPKGWALWQQVEQYMRSVYRDNGYQEVKAPQILDISLWKKTGHWDNYRENMFT 323 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 N +YG P + IF + + SYR LP + + R+E G+MR Sbjct: 324 TESEN---RVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRV 380 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R F D + F T E + +++ G + + + P IG D Sbjct: 381 RGFTQDDGHIF-CTEEQLQDECADFTALLQKVYRDFGFTEVLYKVATRPEKRIGSD 435 >gi|229494206|ref|ZP_04387969.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121] gi|229318568|gb|EEN84426.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121] Length = 406 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + E+ R+G + P + +L+ SG + + +M Sbjct: 24 GLPLWLPDGAVIRNELEKFAAEQAARSGCRGVYTPVMAKKELYERSGHWSKFSDDMFPEM 83 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ + P + +F + +SYR LPF ++ FR EL G+ R R+ Sbjct: 84 KIGGESFLLRPANCPHHAQVFAARGRSYRELPFRVRELGSMFRSELSGVLSGLSRVRQIN 143 Query: 157 MKDAYSF 163 + DA+ F Sbjct: 144 LDDAHVF 150 >gi|254517592|ref|ZP_05129648.1| threonyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] gi|226911341|gb|EEH96542.1| threonyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] Length = 645 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 3/128 (2%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G K + + + +E+ + G + P++ DL+ SG +D Y M L Sbjct: 261 QGLPLIMPKGAKIVQLLQRWVEDEEEKRGYVFTKTPSMSKNDLFKVSGHWDHYKDGMFVL 320 Query: 97 A--DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D++ + M P I+ + SYR LP + + +R+E G++R R Sbjct: 321 GDEDKDPEVMALRPMTCPFQYTIYNAEQHSYRELPIRYAETSTLYRNEASGEMHGLIRVR 380 Query: 154 EFLMKDAY 161 +F + D + Sbjct: 381 QFTLSDGH 388 >gi|307106736|gb|EFN54981.1| hypothetical protein CHLNCDRAFT_24199 [Chlorella variabilis] Length = 572 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 63/325 (19%), Positives = 122/325 (37%), Gaps = 50/325 (15%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ +F ++SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 176 EEPLVVRPTSETIVNHMFAQWVQSYRDLPLLINQWANVHRWEMRTR-PFVRTLEFLWQEG 234 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T + ++ +M LR++ + M +V + Sbjct: 235 HTAHATAQEAEEETIRM----LRVYEDFAVNVAAMP--------------VVAGRKSRIE 276 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F + +E A D + P ++ AR Sbjct: 277 SFAGAN------------------CTYTIE------AMMGDRRALQARRRAPWGRQEGAR 312 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 H G ++ + G+ YV S+G+ + R+V +I + D G+ Sbjct: 313 LAGTSH--NLGDNFARAFGTRYLDEGGQLQYVHQSSWGV-STRMVGGIIMTHGDDAGLRL 369 Query: 341 PDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVAD 396 P +AP ++ ++ I D + A +++ A L G V D ++ G +F + Sbjct: 370 PPRLAPTQVVIVPILKKDVDGEAVMAAVQRLEAALRGAGVRVQVDASTDRTPGWKFNQYE 429 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 + G P++V VG + V R Sbjct: 430 MKGVPVRVEVGPRDVEQGTCVTARR 454 >gi|326503454|dbj|BAJ86233.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326506156|dbj|BAJ91317.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 518 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 5/162 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RGI+ G ++ TF+ G+ V S+ R + ++ + D KG Sbjct: 253 TGRGIQGATSHCLGQNFAKMFDITFENEKGERSMVWQNSWAY-TTRSIGVMVMTHGDDKG 311 Query: 338 IIWPDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFA 393 ++ P VAP ++ +I + D + ACE L++ G D G +++ Sbjct: 312 LVLPPKVAPIQVIVIPVPFKDADTTAIKGACESAVYTLNQAGIRADLDARENYSPGWKYS 371 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++ G PL++ +G K +++ +V I R G + D+ +++ Sbjct: 372 QWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPSTDLV 413 Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 37/81 (45%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM F I+S+R+LP Q R E +RSREFL ++ ++ T Sbjct: 141 PTSETVMYPYFSKWIRSHRDLPLKCNQWCNVVRWEFSNPTPFIRSREFLWQEGHTVFATK 200 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 E + ++ Y RI+ Sbjct: 201 EEADEEVLQILELYRRIYEEF 221 >gi|289524208|ref|ZP_06441062.1| proline--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502864|gb|EFD24028.1| proline--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 481 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 8/162 (4%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R ++ G + G ++ F+ DG+ Y S+G+ + R++ A+I + D G++ Sbjct: 222 RALQAGTSHFLGQNFAKAFDIRFQNKDGELEYAWTTSWGV-STRLIGAIIMTHADNDGLV 280 Query: 340 WPDSVAPFKISLINIKAHDQVCRDA----CEKIYARLSKV-GCDVFWDDMGEQI--GSQF 392 P +VAP K ++ I + ++ +KI RL K+ G + D + G +F Sbjct: 281 LPPNVAPVKTVILPITPDQNLLQEKILPEAQKILERLKKILGANRVILDTQFHMRPGDRF 340 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ +G + S + R TG ++S + + Sbjct: 341 FYHLQKGVPLRLELGEAEMKSSHLRAVRRDTGEVVNISFDAI 382 Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 6/143 (4%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRL----AD 98 P G +++ + + E TG + P L S+ L E+ + + E + + Sbjct: 41 PTGYAIWESIQSQLDERFKETGHVNAYFPLLIPSSFLEKEAKHVEGFSPECAVVTYAGGE 100 Query: 99 RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMK 158 ++ ++ PT E V+ ++ I+S+R+LP Q R E RPR +R+ EFL + Sbjct: 101 ELEEPLVIRPTSETVIGHMYSKWIQSWRDLPILINQWCNVLRWEKRPRL-FLRTSEFLWQ 159 Query: 159 DAYSFDLTPEGSKHSYNKMFVSY 181 + ++ T E + +M Y Sbjct: 160 EGHTAHATREEALEETLRMLEVY 182 >gi|254453851|ref|ZP_05067288.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 238] gi|198268257|gb|EDY92527.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 238] Length = 649 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 82/401 (20%), Positives = 149/401 (37%), Gaps = 54/401 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q G +E++ P + LW +SG ++ Y + Sbjct: 261 MQEEAPGQIFWHPNGWLIYTQLQDYMRRKQRAGGYVEVNTPQVVDRKLWEQSGHWEKYQE 320 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + D A P + I+ +KSYR+LP + R E Sbjct: 321 HMFVVEVDEDHAREKSVNALKPMNCPCHVLIYNQGLKSYRDLPMRMAEFGSCNRYEPSGA 380 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGG 204 G+MR R F DA+ F E ++ +L ++ LG ++ ++ P Sbjct: 381 LHGIMRVRGFTQDDAHIF--CTEDQIEEETLTYIEFLTGVYKDLGFENFKVKFSDRPDTR 438 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 S E + D ET + + + + +E P + Sbjct: 439 AGSDE---VWDKAETALLAA-------------------TRKAGIEPELNP--GEGAFYG 474 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYG 318 KL L + +G + GT + LP + A + GADG+ H V + Sbjct: 475 PKLEFVLTD---------AIGRDWQCGTHQVDFVLPDRLDANYIGADGEKHRPVMLHRAT 525 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G+ ++ H GK W +AP ++ + +I + D ++ A L G Sbjct: 526 LGSFERFIGILIEEHAGKLPFW---LAPRQVVVASIISD---ADDYVREVVAALQAKGVR 579 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + L P+ + G++ V + V ++ Sbjct: 580 AEADIRNEKINYKVREHSLGKVPVILACGAREVEERTVSVR 620 >gi|158319516|ref|YP_001512023.1| prolyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] gi|166980096|sp|A8MLB3|SYP_ALKOO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|158139715|gb|ABW18027.1| prolyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] Length = 480 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 60/346 (17%), Positives = 135/346 (39%), Gaps = 74/346 (21%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E ++ +++ + SYR+LPF + Q +++ RP +R+ EFL ++ ++ Sbjct: 115 PTSETIICEMYSKWLTSYRDLPFLYNQWCSVVRWEKSTRP---FLRTSEFLWQEGHTLHE 171 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 T E ++ +M L I+ + M +V+ E + F Sbjct: 172 TYEEAQAETLQM----LNIYRETAENLLAMP--------------VVIGQKSEKEKFAGA 213 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 A Y + +H+ + ++ G Sbjct: 214 ---------------------------YATYTMEALMHD--------------GKALQAG 232 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 G ++ T+ +G+ + S+G+ + R++ +I D +G++ P +A Sbjct: 233 TSHNLGQHFTTAFDITYSDRNGELKHPYHTSWGV-STRLIGGIIMVHGDNRGLVLPPGIA 291 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLS---KVGCDVFWDDMGEQIGSQFAVADLLGFPL 402 P ++ ++ + +H + D ++ RL +V D D G +F ++ G P+ Sbjct: 292 PTQVVIVPVASHKEGVLDKANELRDRLKDKFRVELD---DRDNYSPGWKFNEWEMKGVPI 348 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMS---LEEVINYASHRFSNN 445 ++ +G + + +++ + R ++ +S LEE + +NN Sbjct: 349 RIEIGPRDIENNQAMLFRRDELEKDAVSLDDLEEAVEKLLEDINNN 394 >gi|260754807|ref|ZP_05867155.1| threonine-tRNA ligase [Brucella abortus bv. 6 str. 870] gi|260758029|ref|ZP_05870377.1| threonine-tRNA ligase [Brucella abortus bv. 4 str. 292] gi|260761852|ref|ZP_05874195.1| threonine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59] gi|297248387|ref|ZP_06932105.1| threonyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] gi|260668347|gb|EEX55287.1| threonine-tRNA ligase [Brucella abortus bv. 4 str. 292] gi|260672284|gb|EEX59105.1| threonine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59] gi|260674915|gb|EEX61736.1| threonine-tRNA ligase [Brucella abortus bv. 6 str. 870] gi|297175556|gb|EFH34903.1| threonyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] Length = 660 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 237 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 292 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 293 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 352 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E + Sbjct: 353 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLHI 411 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 412 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 442 >gi|157736342|ref|YP_001489025.1| threonyl-tRNA synthetase [Arcobacter butzleri RM4018] gi|157698196|gb|ABV66356.1| threonyl-tRNA synthetase [Arcobacter butzleri RM4018] Length = 602 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 84/405 (20%), Positives = 169/405 (41%), Gaps = 47/405 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + A++W SG Y +Y KE + Sbjct: 228 GLPMWLPKGARLRSKLEHLLYKAHRIRGYEPVRGPEILKAEMWKISGHYANY-KENMYFT 286 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +D+ P + IF++++ SY+ LP ++ + R E+ G+ R REF Sbjct: 287 TIDDQEYGIKPMNCVGHIQIFKNNLVSYKELPKKLFEYGVVHRHEMSGAMHGLFRVREFT 346 Query: 157 MKDAYSFDLTPEGSKHSYNKM-FV-SYLRIF---HRLGLKSIPMRAESGPIGGDLSHEFI 211 D++ F + + + + FV + L++F + + + + P +A IG D+ E Sbjct: 347 QDDSHIFCTQDQIKQVIFEVLEFVDTLLKVFDFKYEIEVSTKPEKA----IGDDIFWE-- 400 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +K MD + N + I E A Y D+ K+ D++ Sbjct: 401 ----------KTTKGIMD-ALDENNISY-------GIDEGGGAFYGPKIDI---KILDAI 439 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + +++ F +Y KG K+ V + +G+ ++ Sbjct: 440 GRKWQCGTVQVDMNLPSRFNVEY-----INEKGE--KEQPVMIHRAILGSFERFIGILTE 492 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G+ +P +AP ++ L+ I A V + +++ L + D +M E + + Sbjct: 493 HCAGE---FPFIIAPTQVILVPI-ADSHV--EYAKELQKALLENDLDSEIYNMNESLNKR 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +A+ P+ V++G + V + V +++R T + +MS E I+ Sbjct: 547 IRMAEKQRVPMIVVIGDEEVENKTVALRNRRTREQSNMSKNEFIS 591 >gi|154508918|ref|ZP_02044560.1| hypothetical protein ACTODO_01429 [Actinomyces odontolyticus ATCC 17982] gi|153798552|gb|EDN80972.1| hypothetical protein ACTODO_01429 [Actinomyces odontolyticus ATCC 17982] Length = 677 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 76/345 (22%), Positives = 130/345 (37%), Gaps = 63/345 (18%) Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP FY++ +R E G+ R R F D++++ TPE + Sbjct: 364 IFRSRGRSYRELPLRFYELGHDYRYEKSGVVHGLTRMRGFTQDDSHTY-CTPEQASEEIR 422 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 +L I GLK + + G +FI Sbjct: 423 TQIEFFLSILSAFGLKDFYLELSTRDEDGKKKDKFI------------------------ 458 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV--------GHI 287 +D E W A A D D +P+ + G +V G Sbjct: 459 GSD-----------EDWAAATKALEDACAATGLDLVPDPGGAAFYGPKVSVQVKDAIGRT 507 Query: 288 FYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 + T ++ P + ADG + V + S +G++ V+ + G W Sbjct: 508 WQMSTIQYDFNQPDRFDLEYTAADGSRQRPVMIHSAKLGSVERFIGVLTEHYAGAFPAW- 566 Query: 342 DSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 ++P ++ LI + +A D +D K+ R +V D+ D G++I + A D + Sbjct: 567 --LSPVQVRLIPVAEAFDGYVKDVAAKLRERGVRVETDLSDDRFGKKI--RNASKDKI-- 620 Query: 401 PLQVIVGSKFVSDSKVEIKHR----LTGIREDMSLEEVINYASHR 441 P +I G + V V + R G+ D ++E ++++ R Sbjct: 621 PFTLIAGGEDVEAGAVSFRLRDGSQHNGVAVDRAVELIVSHIEQR 665 >gi|156838419|ref|XP_001642915.1| hypothetical protein Kpol_411p2 [Vanderwaltozyma polyspora DSM 70294] gi|156113495|gb|EDO15057.1| hypothetical protein Kpol_411p2 [Vanderwaltozyma polyspora DSM 70294] Length = 729 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 6/136 (4%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + ++ S G WLP G + + ++R E + G E+ P + ++ LW SG + +Y Sbjct: 335 LFNEMSPGSCFWLPHGTRIYSTLVDMMRTEYRKRGYEEVITPNMYNSKLWETSGHWANYK 394 Query: 91 KEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 + M + YG P + +F+S +SYR LP+ + R+E Sbjct: 395 ENMFTFEVEKE---TYGLKPMNCPGHCLMFKSRERSYRELPWRVADFGVIHRNEYSGALS 451 Query: 148 GVMRSREFLMKDAYSF 163 G+ R R F DA+ F Sbjct: 452 GLTRVRRFQQDDAHIF 467 >gi|15602458|ref|NP_245530.1| threonyl-tRNA synthetase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431883|sp|P57857|SYT_PASMU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|12720863|gb|AAK02677.1| ThrS [Pasteurella multocida subsp. multocida str. Pm70] Length = 643 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 85/412 (20%), Positives = 149/412 (36%), Gaps = 48/412 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G + +YG Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYGD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + I+ G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTACIKMVYDIYSTFGFENIQVKLSTRPEKRIGAD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A+ G S + +++ I F Y + Sbjct: 432 -EMWDRAEAGLAAAL-SHNGLEYEIQEGEGAF----------------YGPKIEFALRDC 473 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D R + G I ++LP ++A++ D M I G++ Sbjct: 474 LD----------REWQCGTI---QLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +I + G +P +AP + ++NI D +K+ LS G V D Sbjct: 521 FIGIITEEYAG---FFPAWLAPTQAIVMNITDSQS---DYVQKVVKTLSDAGLRVKSDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+IG + L P ++ G K + KV ++ R ++EE ++ Sbjct: 575 NEKIGFKIREHTLRRVPYMLVCGDKEIEAGKVAVRTRKGADLGTFTIEEFLD 626 >gi|281357061|ref|ZP_06243551.1| threonyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] gi|281316619|gb|EFB00643.1| threonyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] Length = 591 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 79/403 (19%), Positives = 151/403 (37%), Gaps = 41/403 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G +EE + G + P + + LW SG Y M Sbjct: 215 GLVLWHPKGAFIRHTFETFWKEEHYKNGYELLYTPHIGQSVLWETSGHLSFYKDGMYSPM 274 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++K P + ++++S ++SYR LP + ++ +R E G++R R F Sbjct: 275 QIDEKDYYVKPMNCPFHIEVYQSRLRSYRELPLRWAELGTVYRYEKSGALHGLLRVRGFT 334 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 D++ TPE + ++ L I+ G I + P Sbjct: 335 QDDSHII-CTPEQIEDEIAEVLRFSLYIWKSFGFTEIKPYLSTRPAKA-----------V 382 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 GE + + + + S D + + E A Y D+ K+ D++ Sbjct: 383 GEPERW------EKALVSLRKAIDKLGLECEVDEGGGAFYGPKIDL---KVKDAI----- 428 Query: 277 VSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 R + I + ++LP T+ G DGK H M + G++ ++ + Sbjct: 429 --GREWQTATIQF---DFNLPERFDMTYIGEDGKKHRPYMVHRALMGSLERFFGILIEQY 483 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G +W +AP + ++ + DA + L G V D +G++ Sbjct: 484 AGAFPLW---LAPEQARILPVSDRQH---DAAMALKKELRLKGFRVEVDVKAASLGAKIK 537 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A P ++VG + +D + +++R G M+L++++ Sbjct: 538 DARKERIPYMLVVGEREAADGTMAVRNRREGELGTMTLDQLVE 580 >gi|226941673|ref|YP_002796747.1| threonyl-tRNA synthetase [Laribacter hongkongensis HLHK9] gi|254783525|sp|C1DDA6|SYT_LARHH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226716600|gb|ACO75738.1| Syt [Laribacter hongkongensis HLHK9] Length = 633 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 8/179 (4%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G+ W P G V +R E+ P + LW +SG + Y + Sbjct: 255 IQDEAPGMVFWHPKGWTLWQQVEQYMRRVLIANDYQEVRTPQIVDRSLWEKSGHWAMY-Q 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +++ + + P + IF +KSYR+LP + R+E G+M Sbjct: 314 DLMFTTESEKRDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP---IGGD 205 R R F+ DA+ F E F+ L+ ++ G +I ++ + P +G D Sbjct: 374 RVRNFVQDDAHIF--CTEAQMQPETAAFIDLLQAVYQDFGFDNILIKLSTRPEKRVGAD 430 >gi|126313772|ref|XP_001370758.1| PREDICTED: similar to Threonyl-tRNA synthetase-like 1 [Monodelphis domestica] Length = 717 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 17/149 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + + IR+E R G E+ PTL S LW +SG + Y Sbjct: 313 FHELSPGSCFFLPRGTRVYNALMTFIRDEYARRGFSEVRTPTLFSTKLWEQSGHWKHYSG 372 Query: 92 EM--LRLADRNDKA--------------MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 +M LR D + A + P + IF +S+R LP Sbjct: 373 DMFVLRPPDPDGPADCQNNCSTNHPQSMLALKPMNCPAHCLIFAHRPRSWRELPLRLADF 432 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSF 163 R E G+ R R F DA+ F Sbjct: 433 GALHRTEASGGLGGLTRLRRFQQDDAHIF 461 >gi|62289987|ref|YP_221780.1| threonyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82699915|ref|YP_414489.1| threonyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189024229|ref|YP_001934997.1| threonyl-tRNA synthetase [Brucella abortus S19] gi|254689295|ref|ZP_05152549.1| threonyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|254697431|ref|ZP_05159259.1| threonyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|254730329|ref|ZP_05188907.1| threonyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|256257545|ref|ZP_05463081.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260545263|ref|ZP_05821004.1| threonyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260883825|ref|ZP_05895439.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|73919775|sp|Q57D65|SYT_BRUAB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123740930|sp|Q2YQ07|SYT_BRUA2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238689368|sp|B2S5S6|SYT_BRUA1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|62196119|gb|AAX74419.1| ThrS, threonyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82616016|emb|CAJ11049.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase, class IIa:Threonyl-tRNA synthetase, class IIa:TGS domain:A [Brucella melitensis biovar Abortus 2308] gi|189019801|gb|ACD72523.1| threonyl-tRNA synthetase [Brucella abortus S19] gi|260096670|gb|EEW80545.1| threonyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260873353|gb|EEX80422.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] Length = 658 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 235 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E + Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLHI 409 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 410 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 440 >gi|254693779|ref|ZP_05155607.1| threonyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|261214058|ref|ZP_05928339.1| threonine-tRNA ligase [Brucella abortus bv. 3 str. Tulya] gi|260915665|gb|EEX82526.1| threonine-tRNA ligase [Brucella abortus bv. 3 str. Tulya] Length = 658 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 235 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E + Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLHI 409 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 410 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 440 >gi|150021207|ref|YP_001306561.1| threonyl-tRNA synthetase [Thermosipho melanesiensis BI429] gi|149793728|gb|ABR31176.1| threonyl-tRNA synthetase [Thermosipho melanesiensis BI429] Length = 636 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ +LP G L+ + A R G E+ P + + LW +SG +D Y KE + Sbjct: 261 AAGMPIFLPKGTIILNELMAFSRSLHEEYGYTEVMTPLVMNVKLWYQSGHWDHY-KENMY 319 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 ++ + P + I+++++ SYR+LP ++ R E G++R R Sbjct: 320 FTEKEEVEYAIKPMNCPGHILIYKNNVVSYRDLPIRLFEFGKVHRYERSGVLHGLLRVRA 379 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 380 FTQDDAHIF 388 Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 39/80 (48%) Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 KIY+ L + G V DD E +G + A + P +IVG + K+ I+ R + Sbjct: 557 KIYSILMENGVRVSVDDRNETLGYKIREAQINKIPYMIIVGEREEESGKISIRSRDGVEQ 616 Query: 427 EDMSLEEVINYASHRFSNNR 446 +D+++EE ++ S R Sbjct: 617 KDIAVEEFLDLLSVSIKERR 636 >gi|294340009|emb|CAZ88373.1| threonine tRNA synthetase [Thiomonas sp. 3As] Length = 639 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W P G V +R+ +G E+ P + LW SG +D+Y + Sbjct: 256 QEEAPGLAFWHPKGWALWQAVEQYMRQVYRDSGYQEVKGPQILDVSLWKRSGHWDNYSEN 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + IF S ++SYR+LP + + R+E G++R Sbjct: 316 MF-FTESEKRQFAVKPMNCPGHIQIFNSGLRSYRDLPIRYGEFGSCHRNEPSGALHGLLR 374 Query: 152 SREFLMKDAYSF 163 R F D + F Sbjct: 375 VRGFTQDDGHIF 386 >gi|332141016|ref|YP_004426754.1| threonyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|238693239|sp|B4RSL8|SYT_ALTMD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|327551038|gb|AEA97756.1| threonyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] Length = 638 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 6/177 (3%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W G + + +R++ G E+ P + LW +SG +D Y + Sbjct: 257 QEEAPGMVFWHNDGWSIYTELESFVRKKLREYGYDEVKGPLMMDRSLWEKSGHWDKYAEN 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + IF +KSYR+LP + R+E G+MR Sbjct: 317 MF-TTESEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALHGLMR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R F DA+ F T E + + G ++I ++ + P +G D Sbjct: 376 VRGFTQDDAHIF-CTEEQILEEVSGCIKMVYETYAAFGFENIKVKLSTRPEKRVGAD 431 >gi|311105446|ref|YP_003978299.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans A8] gi|310760135|gb|ADP15584.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans A8] Length = 650 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 10/176 (5%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G V +R G E+ P + LW ++G +D+Y + M Sbjct: 264 APGLIFWHPKGWALWQQVEQYMRSVYRDNGYQEVKAPQILDISLWKKTGHWDNYRENMFT 323 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 N +YG P + IF + + SYR LP + + R+E G+MR Sbjct: 324 TESEN---RVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRV 380 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R F D + F T E + +++ G + + + P IG D Sbjct: 381 RGFTQDDGHIF-CTEEQLQDECADFTALLQKVYRDFGFTEVLYKVATRPEKRIGSD 435 >gi|296423870|ref|XP_002841475.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637715|emb|CAZ85666.1| unnamed protein product [Tuber melanosporum] Length = 658 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 6/136 (4%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + + +R+E + G E+ P + +A LW SG + +Y Sbjct: 316 FFHELSPGSCFFLPHGTRIYNTLVGYLRQEYWKRGYEEVITPNMYNAKLWETSGHWQNYQ 375 Query: 91 KEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 + M DK YG P + +F +SYR LP+ + R+E Sbjct: 376 ENMFTFEVEKDK---YGLKPMNCPGHCLLFGHRERSYRELPWRVADFGVIHRNEFSGALT 432 Query: 148 GVMRSREFLMKDAYSF 163 G+ R R F D + F Sbjct: 433 GLTRVRRFQQDDTHVF 448 >gi|255066457|ref|ZP_05318312.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256] gi|255049337|gb|EET44801.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256] Length = 322 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 66/311 (21%), Positives = 120/311 (38%), Gaps = 45/311 (14%) Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE--GSKHS 173 IF + ++SYR+LP + R+E G+MR R F+ DA+ F + + Sbjct: 24 IFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARA 83 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 +N++ V RI+ + G + ++ P S + A+ G + + +P Sbjct: 84 FNELLV---RIYKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWDELP 140 Query: 234 SENTDFDDIISL---NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 E + I +++ W V E+L AR + + Sbjct: 141 GEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVML------ 194 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 H +GS R + +IE+ H G +W +AP ++ Sbjct: 195 -------------------HRAILGSL----ERFIGILIEN-HAGSFPLW---LAPVQMV 227 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 ++NI + D C ++ A+L G V D E+IG + FP Q++VG K Sbjct: 228 IMNITENQA---DYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKE 284 Query: 411 VSDSKVEIKHR 421 ++KV ++ + Sbjct: 285 KQENKVAVRRK 295 >gi|332701961|ref|ZP_08422049.1| threonyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] gi|332552110|gb|EGJ49154.1| threonyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] Length = 655 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 2/125 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+E R G + P L +LW SG Y+ Y + M Sbjct: 261 GMVIWHPKGALIRTIIEDFERKEHLRRGYHIVQGPQLLKRELWERSGHYEHYRQNMY-FT 319 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +++A P + I++S ++SYR+LP +++ + R E G++R R+F Sbjct: 320 EIDEQAYGVKPMNCLSHMLIYKSKVRSYRDLPLRLFELGVVHRHEKSGVLHGLLRVRQFT 379 Query: 157 MKDAY 161 DA+ Sbjct: 380 QDDAH 384 >gi|218960761|ref|YP_001740536.1| Prolyl-tRNA synthetase 2 (Proline--tRNA ligase 2) (ProRS 2) [Candidatus Cloacamonas acidaminovorans] gi|167729418|emb|CAO80329.1| Prolyl-tRNA synthetase 2 (Proline--tRNA ligase 2) (ProRS 2) [Candidatus Cloacamonas acidaminovorans] Length = 508 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 60/275 (21%), Positives = 104/275 (37%), Gaps = 63/275 (22%) Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 V + ++ GK L+LA + I PT E ++ F + SYR+LP Q R Sbjct: 98 VTHSKLEADGKGGLQLAGELTEPYIVRPTSETIIGASFAKWVNSYRDLPLLINQWANIVR 157 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 E+R R +R+ EFL ++ ++ T + +K KM Y IF R Sbjct: 158 WEMRTRL-FLRTTEFLWQEGHTVHETEKEAKEETLKMLNVYA-IFAR------------- 202 Query: 201 PIGGDLSHEFIVLADTGETQVFCSKDFMDFP-IPSENTDFDDIISLNSIVEQWTAPYAAT 259 D++ P I E T+ + P A T Sbjct: 203 -------------------------DYLALPVIQGEKTESEKF------------PGAVT 225 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 + + D + ++ G + G ++ F+ G+ Y S+G+ Sbjct: 226 TYCIEAMMQDR---------KALQSGTSHFLGQNFAKASEIKFQNRKGEIEYAWTTSWGV 276 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + R++ A+I + D G++ P +AP I++I I Sbjct: 277 -STRLIGAIIMAHSDDNGLVLPPKIAPSHIAIIPI 310 >gi|268576408|ref|XP_002643184.1| C. briggsae CBR-PRS-1 protein [Caenorhabditis briggsae] gi|187040442|emb|CAP20827.1| CBR-PARS-1 protein [Caenorhabditis briggsae AF16] Length = 579 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 67/332 (20%), Positives = 129/332 (38%), Gaps = 67/332 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM ++ ++S+R+LP Q R E + +R+REFL ++ ++ P Sbjct: 193 PTSETVMYPSYKKWVQSHRDLPIKLNQWCNVVRWEFKHPTPFLRTREFLWQEGHTAFANP 252 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++ ++ Y +++ L +IP +V E + F DF Sbjct: 253 SDAEKEVFQILDLYAGVYN--DLLAIP----------------VVKGRKSEKEKFAGGDF 294 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + VE + A + RGI+ Sbjct: 295 ------------------TTTVEAYVA----------------------CNGRGIQGATS 314 Query: 288 FYFGTKYSLPMSATFK--GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 + G +S +++ +G+ + S+G+ + R + A++ D KG+I P VA Sbjct: 315 HHLGQNFSKMFDISYEDPAKEGERAFAWQNSWGL-STRTIGAMVMIHGDDKGLILPPRVA 373 Query: 346 PFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ--IGSQFAVADLLGF 400 ++ ++ + + + DA +K+ L G D+ E G +F +L G Sbjct: 374 AVQVIVVPVGFKTENKEWLFDAVDKVTKDLVAGGIKAE-HDLRENYNAGWKFNHWELKGV 432 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 P++ VG ++ ++V R G + MSL+ Sbjct: 433 PIRFEVGPNDLAKNQVTAVIRHNGEKRQMSLD 464 >gi|239905697|ref|YP_002952436.1| threonyl-tRNA synthetase [Desulfovibrio magneticus RS-1] gi|259516431|sp|C4XL11|SYT_DESMR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239795561|dbj|BAH74550.1| threonyl-tRNA synthetase [Desulfovibrio magneticus RS-1] Length = 647 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G+ + R E R G + P + +LW SG YD+Y +E + Sbjct: 262 GMCIWHPKGELIRTIIEDFERREHLRRGYDLVRGPLILRRELWERSGHYDNY-RENMYFT 320 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++++ P + I++S ++SYR+LP ++++ + R E G++R R+F Sbjct: 321 EIDEQSYGIKPMNCLSHMLIYKSRVRSYRDLPQRYFELGVVHRHEKSGVLHGLLRVRQFT 380 Query: 157 MKDAY 161 DA+ Sbjct: 381 QDDAH 385 >gi|299537247|ref|ZP_07050550.1| threonyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] gi|298727488|gb|EFI68060.1| threonyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] Length = 638 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 6/156 (3%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE +H+ + L M + + G+ +L GQ + + + +R Q + E+ P Sbjct: 239 EAEKRNHRKLGKELSLFMFSEEAPGMPFYLANGQILRNELESYLRHLQAKYDYGEVRTPL 298 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + + LW +SG +D Y K+ + +D++ P + IF++ + SYR+LP Sbjct: 299 MMNQRLWEQSGHWDHY-KDNMYFTQVDDQSFALKPMNCPGHMLIFKNALHSYRDLPIRMA 357 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 + R E G++R R F DA+ F TP+ Sbjct: 358 EFGQVHRHEFSGALNGLLRVRTFCQDDAHIF-ATPQ 392 >gi|237815491|ref|ZP_04594489.1| threonyl-tRNA synthetase [Brucella abortus str. 2308 A] gi|237790328|gb|EEP64538.1| threonyl-tRNA synthetase [Brucella abortus str. 2308 A] Length = 693 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 270 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 325 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 326 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 385 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E + Sbjct: 386 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLHI 444 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 445 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 475 >gi|227821825|ref|YP_002825795.1| threonyl-tRNA synthetase [Sinorhizobium fredii NGR234] gi|254783532|sp|C3MB49|SYT_RHISN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|227340824|gb|ACP25042.1| ThrS; threonyl-tRNA synthetase [Sinorhizobium fredii NGR234] Length = 661 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 96/447 (21%), Positives = 166/447 (37%), Gaps = 60/447 (13%) Query: 7 FLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L E AE H+ + R + H + G+ W G + ++ A +R + Sbjct: 234 YLHVLAE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRVFQSLVAYMRR-RLE 288 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL---ADRNDKAMIYG--PTHEEVMTDIF 118 E++ P + LW SG + Y M ++ D D ++ P + IF Sbjct: 289 VDYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHIQIF 348 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR LP + R E G+MR R F DA+ F T E K+ Sbjct: 349 KHGLKSYRELPVRMAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIF-CTDEQMAAECLKI 407 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 L ++ G K I ++ + P +G D L D E + Sbjct: 408 NDLILSVYEDFGFKEIVVKLSTRPDKRVGSD------ALWDRAEAVM------------- 448 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK- 293 TD + I S T + K +L + +G + GT Sbjct: 449 --TDVLNTIEAQSEGRIKTGILPGEGAFYGPKFEYTLKDA---------IGREWQCGTTQ 497 Query: 294 --YSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 ++LP A + D + M I G+M ++ ++ G +W ++P + Sbjct: 498 VDFNLPERFGAFYIDKDSEKRQPVMIHRAICGSMERFLGILLENYAGHMPLW---ISPLQ 554 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 + + I + D ++ ARL + G V D E+I + + P+ V+ G Sbjct: 555 VVVATITSD---ADDYGREVAARLREAGLTVETDFRNEKINYKIREHSVTKVPVIVVCGK 611 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVI 435 + + V I+ + + MSLEE + Sbjct: 612 REAEERSVNIRRLGSQAQTAMSLEEAV 638 >gi|189197599|ref|XP_001935137.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981085|gb|EDU47711.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 542 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 13/142 (9%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 +S G LP G + + +R + + G E+ P + LW +SG +++Y ++M Sbjct: 88 YSPGSPLILPNGAYVFQKLQSFLRAQYPQFGFQEVITPIIYKKSLWEKSGHWENYAEDMF 147 Query: 95 RLADRNDKAMI----------YG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 + R A I +G P + +FR IKSYR+LP R+E Sbjct: 148 SVQGRGTTAQIPEAEGGEDGEFGLKPMNCPGHCLLFRDEIKSYRDLPVRLADFSALHRNE 207 Query: 143 LRPRF-GVMRSREFLMKDAYSF 163 + G+ R R F DA+ F Sbjct: 208 ISGALTGLTRVRRFHQDDAHIF 229 >gi|325685802|gb|EGD27875.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 643 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 84/408 (20%), Positives = 160/408 (39%), Gaps = 39/408 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I +++ G + P L + D + SG + Y ++M Sbjct: 259 GLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPM 318 Query: 98 DRNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + M+ P + I++ HI+SYR LP ++ + R E G+ R RE Sbjct: 319 GMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 378 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + D ++F + + + + + + ++H + R LS+ D Sbjct: 379 TLNDGHTF-VALDQVQEEFARTLQIIMDVYHDFDINDYYFR---------LSYR-----D 423 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + D M S D + L+ + E A Y D+ + +L + Sbjct: 424 PKNTDKYFANDEMWERSQSMLKAAMDDMGLDYVEAEGEAAFYGPKLDIQTKT---ALGND 480 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSH 333 + +S ++ F ++ L ++ GADG++H M GI G M A + + Sbjct: 481 ETMSTIQLD----FMLPERFEL----SYIGADGEEHRPVMIHRGIVGTMERFIAYLTEIY 532 Query: 334 DGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G W +AP + +I N+ AH D +K+ L G D E++G + Sbjct: 533 KGAFPTW---LAPVQAEIIPVNLDAH----SDYAKKVRDELVAKGFRAEIDFRNEKLGYK 585 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 + P +++G ++ V ++ T + SL E ++ S Sbjct: 586 IRESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMDKLS 633 >gi|312116222|ref|YP_004013818.1| prolyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311221351|gb|ADP72719.1| prolyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 514 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 81/390 (20%), Positives = 145/390 (37%), Gaps = 89/390 (22%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 R + F Q RDA++A + + +I GI+ + QK LD A I+E + Sbjct: 10 REQNFPEWYQAVVRDADLAENSPVRGCMIIKPWGYGIWERV---QKGLD---ARIKETGH 63 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEML-----RLADRNDK-----------AMIY 106 + +P + L E+ + + KEM RL + + K +I Sbjct: 64 ENCYFPIFIPM---SFLAKEAEHVEGFAKEMAVVTHHRLKNIDGKLVPDPEAELQEPLIV 120 Query: 107 GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLT 166 PT E ++ D F+ +KSYR+LP Q R E+R R +R+ EFL ++ + T Sbjct: 121 RPTSETIIGDAFQRWVKSYRDLPILINQWANVVRWEMRTRM-FLRTTEFLWQEGH----T 175 Query: 167 PEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 K + L ++ + M +V + E + F Sbjct: 176 AHADKTDAMAETLRMLEVYRSFAEDVLAMP--------------VVAGEKPENERFPGA- 220 Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGH 286 D+ S+ ++++ A A TS Sbjct: 221 -------------DNTYSIEAMMQDGKALQAGTS-------------------------- 241 Query: 287 IFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 Y GT ++ + F+ G+ S+G+ + R++ VI + D G+ P ++AP Sbjct: 242 -HYLGTHFAEAQNIRFQNEAGELALCHTTSWGV-STRLIGGVIMTHGDDDGLRLPPAIAP 299 Query: 347 FKISLINI---KAHDQVCRDACEKIYARLS 373 +I ++ + K D + C + A L+ Sbjct: 300 KQIVIVPMLRDKPEDAAVVEFCTSLAAELN 329 >gi|291519633|emb|CBK74854.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Butyrivibrio fibrisolvens 16/4] Length = 588 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 86/419 (20%), Positives = 152/419 (36%), Gaps = 60/419 (14%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +LP G + IR ++ + G + + P + + L+ SG +D Y + M Sbjct: 203 RGLPMYLPNGYTIWTELENYIRNKERKLGYLHVMTPCVGTVQLYQTSGHWDHYKENMFPA 262 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P + IF + SY+ LP +I FR E G+ R R F Sbjct: 263 MEVEGESFVLRPMNCPHHMRIFANRPHSYKELPIRIAEIAHDFRFESSGTLKGIERGRHF 322 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 D++ F T E K +KS+ DL F D Sbjct: 323 CQNDSHIF-CTQEQIKSE----------------VKSV----------CDLI--FSTYED 353 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 G T C D P ++ DD E W A + E + E Sbjct: 354 FGITDYRCVLSLRD-PADTKKYHQDD--------EMWNTAEQALRETLTEIGIEFTEEIG 404 Query: 276 RVSARGIE--------VGHIFYFGT---KYSLP--MSATFKGAD-GKDHYVQMGSYGIGA 321 + G + +G+ T + LP T+ AD K V + +G+ Sbjct: 405 EAAFYGPKLDVNVKPAIGNEITLSTCQLDFCLPAKFDLTYTDADSNKQTPVVIHRAILGS 464 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + A I G +W +AP ++ ++ +K D +K+ L+ V + Sbjct: 465 LDRFMAYILEETKGNLPLW---LAPTQVKVLPVKNDDADLNAYAQKLVDALADADVRVEF 521 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK----HRLTGIREDMSLEEVIN 436 D E++G + A + P ++G ++ V + H T ++ D +E ++N Sbjct: 522 DTRSEKLGYKMREAQIQKVPYLAVLGKNEEAEGTVSYRLHGEHGTTTVKFDEFVELIVN 580 >gi|167393549|ref|XP_001740621.1| prolyl-tRNA synthetase [Entamoeba dispar SAW760] gi|165895194|gb|EDR22941.1| prolyl-tRNA synthetase, putative [Entamoeba dispar SAW760] Length = 536 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 70/334 (20%), Positives = 130/334 (38%), Gaps = 65/334 (19%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ F++ I +R+LP Q R E + +R+REFL ++ ++ T Sbjct: 143 PTSETIIYPAFKNWISGHRDLPIKVNQWCNVVRWEFSHPYPFIRTREFLWQEGHTAFATQ 202 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++ +++ Y ++ L ++P+ I G S GET Sbjct: 203 IEAEKECHQILELYASVYE--DLLAVPV------IRGKKSK--------GET-------- 238 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 FP A Y+ T + +P N R ++ Sbjct: 239 --FP---------------------GAYYSLTVEC-------IIPTN----GRSVQAATS 264 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + G +S F+ D K V S+G+ + R + I + D KGII P A Sbjct: 265 HHLGQTFSKLFQIEFEDEDNKKQLVWQNSWGL-STRSIGVTIMTHGDNKGIIVPPRAAQK 323 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKV----GCDVFWD-DMGEQIGSQFAVADLLGFPL 402 ++ +I + H D + L+++ G F D + + G +F+ ++ G P+ Sbjct: 324 QVVIITLH-HKGSPNDEMDAKAEELTQILLDNGIRAFADTNEMHKPGWKFSEYEMRGIPI 382 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 ++ +G + KV I R G + + + E++I Sbjct: 383 RIELGPRDYEGKKVVIVRRDNGTKSESTWEDLIQ 416 >gi|316965047|gb|EFV49888.1| threonyl-tRNA synthetase, cytoplasmic [Trichinella spiralis] Length = 714 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 81/401 (20%), Positives = 158/401 (39%), Gaps = 54/401 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + H+ S G + P G + + +R++ + G E+ P + ++ LW SG + Y Sbjct: 307 IFHELSPGSAFFFPRGAYIYNTLVEFLRKQYRKRGFREVITPNIYNSRLWETSGHWQHYA 366 Query: 91 KEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 K M ++ + ++G P + +F + +++Y+ LP F + R+EL Sbjct: 367 KNMFKIEIEKE---LFGLKPMNCPGHCLMFATGLRTYKELPLRFADFGVLHRNELSGALS 423 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP--IGG 204 G+ R R F DA+ F + S + + +LR ++ LG S+ + + P G Sbjct: 424 GLTRVRRFQQDDAHIF--CRQDQIASEIEGCLDFLRFVYETLGF-SMKLYLSTRPDDFMG 480 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 D + D E Q+ C+ + P D A Y D+ Sbjct: 481 D-----VKTWDEAEAQLQCALEKFKLPWTLNAGD--------------GAFYGPKIDI-- 519 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG---KDHYVQMGSYGIGA 321 + D++ + + ++ + LP+ D K V + +G+ Sbjct: 520 -IVLDAMQRQHQCATIQLD----------FQLPVRFDLHYVDENHVKQRPVIIHRAVLGS 568 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVF 380 + + AV+ + GK WP ++P + +I + D +KI+ + DV Sbjct: 569 IERMIAVLTENFAGK---WPFWLSPRQAMVIPVHPEFDDYALQVQQKIFDAGFECDVDV- 624 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + + + A L + ++VG+K +S V I+ R Sbjct: 625 --DASDTMKKKIRNAQLGKWNFILVVGAKEKENSSVNIRTR 663 >gi|118475741|ref|YP_892822.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] gi|118414967|gb|ABK83387.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] Length = 617 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 85/420 (20%), Positives = 162/420 (38%), Gaps = 63/420 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + + G + P + +D W SG Y +Y KE + Sbjct: 243 GLPIWLPNGARLRSRLEHKLYRTHRLRGYEPVRGPEILKSDAWKISGHYANY-KENMYFT 301 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S I+SYR+LP F++ + R E G+ R REF Sbjct: 302 VIDEQEYGIKPMNCVGHIKVYQSEIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFT 361 Query: 157 MKDAYSFDLTPEGSKHSYNKM-----FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 DA+ F + + ++ Y + +S + + + + P +A +G D E Sbjct: 362 QDDAHLFCMPSQIKENVYEILSFVDTLMSAFGFTYEMEISTKPAKA----VGDDAVWEIA 417 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 A KD +D D E A Y D+ K+ D+L Sbjct: 418 TKA---------LKDALDEKGLKYGID-----------EGGGAFYGPKIDI---KITDAL 454 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD--------HYVQMGSYGIGAMR 323 R + G I ++LP D + H MGS+ R Sbjct: 455 -------KRKWQCGTI---QVDFNLPARFDLGYIDENNERKQPVMLHRAIMGSF----ER 500 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + ++E + G+ W +AP ++ +I I ++++ L + D + Sbjct: 501 FIGILLEHTA-GELPFW---IAPTQVVIIPISNEHH---KYANEVHSLLLDMDVDSEIFN 553 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E + + A+ P+ +++G V++ V ++ R ++DMSL+E + + + + Sbjct: 554 KNETLNKKIRTAEKQRVPMIIVLGDNEVTNRGVALRDRRAREQKDMSLDEFLGFIQSKLN 613 >gi|45190711|ref|NP_984965.1| AER105Wp [Ashbya gossypii ATCC 10895] gi|44983690|gb|AAS52789.1| AER105Wp [Ashbya gossypii ATCC 10895] Length = 457 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 8/154 (5%) Query: 19 EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR-EEQNRTGAIEMSVPTLQSA 77 E++S + + T I S G +LP G K + + ++ ++QN+ G E+ P + Sbjct: 39 EVSSRQDLYLTDPI---SPGSTFFLPNGTKVFNKLIQFMKLQQQNKFGFQEVITPLIYRK 95 Query: 78 DLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 LW +SG +++Y +M R+ + YG P + +F+ +SY LP F Sbjct: 96 SLWEQSGHWENYKDDMFRVEGNDCAKEEYGLKPMNCPGHCVMFKRFDRSYTELPLRFSDF 155 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 R+E G+ R R+F D + F TPE Sbjct: 156 SPLHRNEASGALSGLTRVRKFHQDDGHIF-CTPE 188 >gi|37526560|ref|NP_929904.1| threonyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|73919813|sp|Q7N3P6|SYT_PHOLL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|36785991|emb|CAE15043.1| threonyl-tRNA synthetase (threonine--tRNA ligase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 642 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 75/394 (19%), Positives = 141/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + +W +G +++YG+ Sbjct: 256 MQEEAPGMAFWHNDGWTIFRELETFVRTKLKEYQYQEVKGPFMMDRVMWERTGHWENYGE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + + P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCV-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + ++ G + I ++ + P + E Sbjct: 375 RVRGFTQDDAHIF-CTEEQIHREVSSCIKMVYDVYSTFGFEKIVVKLSTRPEKRIGTEEQ 433 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ P E + I L D Sbjct: 434 WNQAEESLAAALQENGVQFEYQPGEGAFYGPKIEFT--------------------LHDC 473 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAA 327 L R + G + +SLP +SA++ G + + V + +G++ Sbjct: 474 LD-------RAWQCGTV---QLDFSLPGRLSASYVGENNERKVPVMIHRAVLGSLERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G +P +AP ++ ++NI D +++ +L G D E+ Sbjct: 524 ILTEEYAG---FFPTWIAPQQVVVMNITDSQA---DYVQELVKKLQDAGIRAKADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++ G K V KV ++ R Sbjct: 578 IGFKIREHTLRRVPYMLVCGEKEVESGKVSVRTR 611 >gi|227432351|ref|ZP_03914343.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351872|gb|EEJ42106.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 652 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 11/165 (6%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G V I +++ G + P L + +L+ SG +D Y ++M Sbjct: 266 GLPVWLPNGATIRRQVERYITDKELSNGYQHVYTPVLSNLNLYKTSGHWDHYREDMFPPM 325 Query: 98 DRNDKAMI-----YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D D + P+H +M +F +SYR LP ++ + R E G+ R Sbjct: 326 DMGDGEFLELRPMNCPSH--IM--VFNHKPRSYRELPMRIAELGMMHRYEKSGALTGLSR 381 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 RE + D ++F + PE + + + + ++ +K+ R Sbjct: 382 VREMTLNDGHTF-VEPEKLEEEFKSILTMMMGVYRDFNIKNYRFR 425 >gi|226226691|ref|YP_002760797.1| threonyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] gi|226089882|dbj|BAH38327.1| threonyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] Length = 660 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 7/156 (4%) Query: 14 NPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 N +A+ H+++ L I + G W P G + + +RE Q E+ Sbjct: 239 NLEEAKKRDHRVLGKALGLFQIFPQAPGAAFWTPKGTTLYNTLEGFVRERQQEAFQ-EIK 297 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADR--NDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 P L + LW +SG + Y + M + D + M P + +F S SYR + Sbjct: 298 TPLLYNKKLWEQSGHWGKYKENMFLVLDNETGEHDMSLKPMNCPSHHVLFASEKHSYRQM 357 Query: 129 PFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 P F + R+EL G+ R R+F D + + Sbjct: 358 PVRFVTFDVLHRNELSGALSGLTRVRQFSQDDCHVY 393 >gi|197097988|ref|NP_001125825.1| threonyl-tRNA synthetase, cytoplasmic [Pongo abelii] gi|55729334|emb|CAH91401.1| hypothetical protein [Pongo abelii] Length = 563 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 87/418 (20%), Positives = 164/418 (39%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 174 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 233 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 234 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 292 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 293 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 348 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 349 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 385 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 386 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 434 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 435 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 488 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + L ++VG K V I+ R + + ++ E I Sbjct: 489 DIDLDP-GCTLNKKIRNAQLAQYNLILVVGEKEKISGTVNIRTRDNKVHGERTISETI 545 >gi|330935757|ref|XP_003305117.1| hypothetical protein PTT_17864 [Pyrenophora teres f. teres 0-1] gi|311318063|gb|EFQ86830.1| hypothetical protein PTT_17864 [Pyrenophora teres f. teres 0-1] Length = 528 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 13/142 (9%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 +S G LP G + + +R + + G E+ P + LW +SG +++Y ++M Sbjct: 74 YSPGSPLILPNGAYVFQKLQSFLRAQYPQFGFQEVITPIIYKKSLWEKSGHWENYAEDMF 133 Query: 95 RLADRNDKAMI----------YG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 + R A I +G P + +FR IKSYR+LP R+E Sbjct: 134 SVQGRGTTAQIPEAEGGEDGEFGLKPMNCPGHCLLFRDEIKSYRDLPVRLADFSALHRNE 193 Query: 143 LRPRF-GVMRSREFLMKDAYSF 163 + G+ R R F DA+ F Sbjct: 194 ISGALTGLTRVRRFHQDDAHIF 215 >gi|283955362|ref|ZP_06372861.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] gi|283793122|gb|EFC31892.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] Length = 602 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 93/447 (20%), Positives = 175/447 (39%), Gaps = 51/447 (11%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD +L L T + G+ WL G + + ++ + Sbjct: 195 KEYLTIIEEAKKRDHRKLGAELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRL 253 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L AD W SG Y +Y KE + +++ P + I++S+++ Sbjct: 254 RGYEPVRGPELLKADAWKISGHYANY-KENMYFTQIDEQEYGIKPMNCVGHIKIYQSNVR 312 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM-FV-S 180 SYR+LP F++ + R E G+ R REF DA+ F + + + + FV + Sbjct: 313 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDN 372 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +++F D S+E + T + + + + D Sbjct: 373 LMKLF-------------------DFSYEMEI--STKPEKAIGDDEIWEVATKALKEALD 411 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ K+ D+L R + G I ++LP Sbjct: 412 EQGLKYGIDEGGGAFYGPKIDI---KITDAL-------KRKWQCGTI---QVDFNLPNRF 458 Query: 301 TFKGADG---KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KA 356 + D K V + +G+ ++ G+ +P +AP I ++ I +A Sbjct: 459 KLEYTDSNNEKKQPVMLHRAILGSFERFIGILTEHCAGE---FPFFIAPTAIGIVPIGEA 515 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 H ++ I L K D + E + + +A+ P+ +++G V+ V Sbjct: 516 HIAYAKE----IQKELLKFNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSV 571 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 ++ R ++++SL+E I + S Sbjct: 572 ALRDRRAKEQKNLSLDEFIKLVKEKMS 598 >gi|302404307|ref|XP_002999991.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] gi|261361173|gb|EEY23601.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] Length = 790 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 17/165 (10%) Query: 15 PRDAEIASHKLMLRTG---------------MIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 P E+A+HK L H+ S G WLP G + + + A I+E Sbjct: 314 PSKKELAAHKKWLEEAAARDHRKLGEQQQLFFFHELSPGSAMWLPHGARIYNTLMAYIKE 373 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 + + E+ P + ++DLW SG + Y +M + D + + P + +F Sbjct: 374 QYFKRDYHEVITPNMYNSDLWKVSGHWAHYKDDMF-VMDVDKEQFALKPMNCPGHCLMFG 432 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 K+Y LP+ + R+E G+ R R F DA+ F Sbjct: 433 HAPKAYHQLPWRVADFGVLHRNEASGALSGLTRVRRFQQDDAHIF 477 >gi|169351009|ref|ZP_02867947.1| hypothetical protein CLOSPI_01786 [Clostridium spiroforme DSM 1552] gi|169292071|gb|EDS74204.1| hypothetical protein CLOSPI_01786 [Clostridium spiroforme DSM 1552] Length = 606 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 6/177 (3%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ +++ G+ +LP G + + EE + G + + P + S +LW SG + +Y Sbjct: 224 MMSEYAPGMPIFLPKGMILRNTLEQFWYEEHTKEGYVFIKTPIMMSRELWETSGHWANYK 283 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +M + +D+ P + ++++ + SY++LP ++ R E G+ Sbjct: 284 DDMY-TSMVDDREFAIKPMNCPGSLLVYKNGLHSYKDLPLRMGELGQVHRHEASGALNGL 342 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIG 203 R R F DA+ F +TP+ + K+ R+++ L L + R E IG Sbjct: 343 FRVRTFTQDDAHIF-MTPDQIESEIIKLINFIDRVYNSLNLSYEIELSTRPEEKYIG 398 >gi|254796675|ref|YP_003081511.1| threonyl-tRNA synthetase [Neorickettsia risticii str. Illinois] gi|254589907|gb|ACT69269.1| threonyl-tRNA synthetase [Neorickettsia risticii str. Illinois] Length = 647 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 6/197 (3%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +L L E R A K M + + ++G W G + IR + Sbjct: 234 YLSFLHEAKRRDHRAIGKTM-ELFHLQEEAQGQVFWHENGFLLYRVLENYIRSKLKAHDY 292 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + S LW SG + + KE + + +D P + ++F+ +KSYR Sbjct: 293 REVKTPVVYSKCLWERSGHWSKF-KENMFVIRSDDGEFSLKPMNCPAHIEVFKQSLKSYR 351 Query: 127 NLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-I 184 +LP + + R+E G+MR R F+ DA+ F TPE F L+ + Sbjct: 352 DLPLRLAEFGMCHRNEASGALHGLMRVRGFVQDDAHIF-CTPE-QICDETVAFCELLKEV 409 Query: 185 FHRLGLKSIPMRAESGP 201 + LG + +R P Sbjct: 410 YRDLGFTEVEVRFSDRP 426 >gi|161528434|ref|YP_001582260.1| threonyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] gi|238686913|sp|A9A2B1|SYT_NITMS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160339735|gb|ABX12822.1| threonyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] Length = 621 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 72/331 (21%), Positives = 132/331 (39%), Gaps = 48/331 (14%) Query: 124 SYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY+NLP+ Y++ + FR E G+ R R F M D ++F Sbjct: 307 SYKNLPYKLYELTRYSFRREQSGELVGLRRLRAFTMPDCHAF------------------ 348 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 K IP + + DLS + E+ + F + + ++ Sbjct: 349 --------CKDIPQAVDEIKVRFDLSQSVLKELGIDESDYDMAIRFTEDFYNENKSAIEE 400 Query: 242 IISLNS---IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 ++ + +VE W + D+L + +S I+V + G +Y + Sbjct: 401 LVKKHGRPVLVEMWKEKFFYFVLKWEFNFIDNLGKASALSTDQIDVEN----GDRYGIEF 456 Query: 299 SATFKGADGKDHYVQMGSYGIGAM-RVVAAVIESSHD----GKGIIWPDSVAPFKISLIN 353 A H + + + GA+ R++ A++E + D GK P +AP ++ +I Sbjct: 457 VDENNTAQ---HPIILHNSPSGAIERIIYALLEKAADDSKKGKKPQLPLWLAPTQVRIIP 513 Query: 354 IKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 +K C + C+KI A+ V DV DD E IG + A+ +++G K Sbjct: 514 LKEEFYDFCNNLCDKISAQ--NVRVDV--DDRNESIGKRIREAEKEWIQYILVIGEKEAG 569 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 + I+ R TG ++S ++ +N + + S Sbjct: 570 SENLSIRDRQTGNVREVSFDDFMNEINEQTS 600 >gi|49475537|ref|YP_033578.1| threonyl-tRNA synthetase [Bartonella henselae str. Houston-1] gi|73919770|sp|Q6G3K1|SYT_BARHE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|49238343|emb|CAF27567.1| Threonyl-tRNA synthetase [Bartonella henselae str. Houston-1] Length = 658 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 100/449 (22%), Positives = 175/449 (38%), Gaps = 59/449 (13%) Query: 5 KYFLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H+ + R + H + G+ W G K N+ +R Sbjct: 233 KAYLHMLEE----AEKRDHRRLGREMNLFHFQEEGPGMIFWHKKGWKMFQNLINYMRRRL 288 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL---ADRNDKAMIYG--PTHEEVMTD 116 + E++ P + LW SG ++ Y + M + A+ D +Y P + Sbjct: 289 DDHQYAEVNAPQVLDRSLWEISGHWEWYKENMFKAIPAAEDWDNENVYALKPMNCPGHVQ 348 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IF+ +KSYR+LP + + R E G+MR R F DA+ F + + N Sbjct: 349 IFKHGLKSYRDLPTRIAEFGVVHRYEPSGSLHGLMRVRCFTQDDAHIFCTDEQLADECLN 408 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + G K I ++ + P +G D L D E + M+ Sbjct: 409 -INDLILSTYADFGFKEISLKLSTRPEKRVGSD------ALWDHAE-------NIME--- 451 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 S+ +E +A TS + E F P+ + I G + GT Sbjct: 452 -----------SVLKTIETKSAGQIKTSILPGEGAFYG-PKFEYTLKDAI--GREWQCGT 497 Query: 293 K---YSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAP 346 ++LP +A + D + M I G+M ++ + G +W AP Sbjct: 498 TQLDFNLPERFNAFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFSGHMPLW---FAP 554 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 +I + I + + +K+ A+L VG D E+I + L P+ ++ Sbjct: 555 EQIVVATITSE---ANEYAKKLTAKLKSVGLSTTLDLRNEKINYKIREHSLQKVPVILVC 611 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + + V ++ + + +S+EEVI Sbjct: 612 GKRESETNSVNMRRLGSTEQIFLSVEEVI 640 >gi|153009484|ref|YP_001370699.1| threonyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] gi|151561372|gb|ABS14870.1| threonyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] Length = 661 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K N+ + +R + Sbjct: 238 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 293 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL---ADRNDKAMIYG--PTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ D D ++ P + IF Sbjct: 294 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHVMIF 353 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 354 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLRI 412 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 413 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 443 >gi|108758923|ref|YP_631780.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622] gi|122981032|sp|Q1D6E3|SYT_MYXXD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|108462803|gb|ABF87988.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622] Length = 642 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H +S G W P G ++ +R+ G +E+ P + + LW SG + Y + Sbjct: 261 FHPYSPGSAFWTPKGTTLYTTLSNWMRQLTQNDGYVEIKTPLMFNKGLWETSGHWGKYKE 320 Query: 92 EMLRLADRNDKAMIYG------PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 M + D + P+H F+ H SYR+LP ++ + R+E Sbjct: 321 NMFLVLDSESGEHDFSLKPMNCPSHHLFYG--FKKH--SYRDLPLRYHTQDVLHRNEAAG 376 Query: 146 RF-GVMRSREFLMKDAYSF----DLTPEGSK------HSYNKMFVSY-----LRIFHRLG 189 G+ R R+F DA+ + +T E + H Y + ++Y R RLG Sbjct: 377 SLGGLTRVRQFAQDDAHIYCTEAQITDEVRRFVKLLDHVYKAVGLTYAVKLSTRPEQRLG 436 Query: 190 LKSIPMRAESG 200 S+ RAE G Sbjct: 437 DDSLWDRAEGG 447 >gi|50310653|ref|XP_455348.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644484|emb|CAG98056.1| KLLA0F05918p [Kluyveromyces lactis] Length = 744 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 ++ S G WLP G + + + ++R E + G E+ P + ++ LW SG + +Y + Sbjct: 351 FNEMSPGSCFWLPHGTRIYNTLVDLLRSEYRKRGYDEVITPNMYNSKLWETSGHWANYKE 410 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F++ +SYR LP+ + R+E G+ Sbjct: 411 NMFSF-EVEKETFGLKPMNCPGHCLMFKARERSYRELPWRVADFGVIHRNEFSGALSGLT 469 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 470 RVRRFQQDDAHIF 482 >gi|257467995|ref|ZP_05632091.1| threonyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|317062281|ref|ZP_07926766.1| threonine-tRNA ligase [Fusobacterium ulcerans ATCC 49185] gi|313687957|gb|EFS24792.1| threonine-tRNA ligase [Fusobacterium ulcerans ATCC 49185] Length = 637 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 98/459 (21%), Positives = 185/459 (40%), Gaps = 68/459 (14%) Query: 3 RSKYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 + K +L +L+E AE H+ + L + ++ G +LP G + + + R Sbjct: 226 KLKAYLTLLEE----AERRDHRKLGKELDLFFVSEYGPGFPIFLPKGMVIRNTLIDLWRR 281 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E G E++ P + + +LW SG + +Y +E + + ++ P + ++ Sbjct: 282 EHTLAGYQEITTPIMLNKELWEISGHWFNY-RENMYTSTIDETEFAIKPMNCPGGILAYK 340 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE-------GSK 171 + SY++ P ++ R E G+MR R F DA+ F +TP+ G Sbjct: 341 YQLHSYKDFPIRCGELGTVHRHEFSGALHGLMRVRSFTQDDAHIF-MTPDQIEEEIIGVV 399 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 +K + + + L + P +A IG + + + E + + D + P Sbjct: 400 ELIDKFYSKLFGFEYHIELSTKPEKA----IGSN------EIWEKAEAALAGALDKIGKP 449 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 D A Y D K+ D++ R + G I Sbjct: 450 YKLNPGD--------------GAFYGPKLDF---KIKDAI-------GRTWQCGTI---Q 482 Query: 292 TKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 ++LP ++ G DG+ H V + G++ ++ G +W +AP + Sbjct: 483 LDFNLPERFDISYIGEDGEKHRPVMIHRVVYGSIERFIGILIEHFAGAFPLW---LAPTQ 539 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVG 407 + ++ I +D+V A E I+ L + G DD E IG + A+ P+Q+I+G Sbjct: 540 VKILTI--NDEVVPYAKE-IFKALQERGIRAEIDDRAESIGYKIREANGKYKVPVQLILG 596 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEE----VINYASHRF 442 V + +V I+ + +E M L+E +++ A RF Sbjct: 597 KNEVENREVNIRKFGSQQQESMKLDEFLDIIVDEAKIRF 635 >gi|319783887|ref|YP_004143363.1| threonyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169775|gb|ADV13313.1| threonyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 658 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 85/418 (20%), Positives = 153/418 (36%), Gaps = 52/418 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + G+ W G K N+ +R + G E++ P + LW SG + Y Sbjct: 260 QEEGPGVVFWHAKGWKMFQNLVNYMRRRLDEQGYQEVNAPQVLDKSLWETSGHWGWYRDA 319 Query: 93 MLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 M ++ +D+ P + IF+ +KSYR+LP + R E Sbjct: 320 MFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDLPVKLAEFGNVHRYEPSGAL 379 Query: 148 -GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IG 203 G+MR R F DA+ F T E ++ L + G I ++ + P +G Sbjct: 380 HGLMRVRGFTQDDAHIF-CTEEQLAAECLRINDLILSTYADFGFDEISVKLSTRPDKRVG 438 Query: 204 GD--LSHEFIVLADTGETQVFCSKDFMDFPI-PSENTDFD---DIISLNSIVEQWTAPYA 257 D H ++ ET S + + I P E + + + ++I +W Sbjct: 439 TDEAWDHAEAIMGGVLETIRTRSGNRIKTSINPGEGAFYGPKFEYVLKDAIGREWQ---C 495 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 T+ V +LPE R A FY G+ K V + Sbjct: 496 GTTQVDF-----NLPE--RFGA--------FYIGSDSE------------KKQPVMVHRA 528 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+M ++ ++ G +W AP ++ + I + D ++ A+L G Sbjct: 529 ICGSMERFLGILIENYSGHFPLW---FAPLQVVVATITSD---ADDYATEVVAKLKAAGL 582 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+I + L P+ ++ G + + V ++ + +E + L++ I Sbjct: 583 LAEADLRNEKINYKVREHSLAKVPVILVCGKREAEEQTVNMRRLGSRDQESLGLDQAI 640 >gi|258512139|ref|YP_003185573.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478865|gb|ACV59184.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 648 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 84/404 (20%), Positives = 167/404 (41%), Gaps = 37/404 (9%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ WLP G K + I + + G + P L + +L+ SG ++ Y +M Sbjct: 262 GQGLPLWLPNGAKIRRIIERYIVDLEESLGYQHVYTPHLANVELYKISGHWEHYKDDMYP 321 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +++ ++ P + +++ + SYR LP ++ R E+ G+ R R Sbjct: 322 PMKIDNEELVLRPMNCPHHMMVYKHRLHSYRELPIRIAELGTMHRYEMSGALAGLQRVRA 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + DA+ F P+ + + + R++ G+ R LS+ Sbjct: 382 MTLNDAHIF-CRPDQIEQEFTGVVRLIQRVYKDFGIDDYYHR---------LSYR----- 426 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPE 273 D T+ + D M S + L + E A Y DV ++ +L + Sbjct: 427 DPKNTEKYVQNDEMWELAQSTLRKVMLDLGLEFVEAEGEAAFYGPKLDV---QVRTALGK 483 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAM-RVVAAVIES 331 ++ +S ++ F+ +++L + G DG+ H + G +G M R VA +IE Sbjct: 484 DETLSTIQLD----FHLPNRFNL----EYVGEDGERHRPVVIHRGVVGTMERFVAFLIEQ 535 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 KG +P +AP ++ + ++ D+ A E++ A+L ++G D +IG + Sbjct: 536 Y---KG-AFPTWLAPTQVVVASVA--DEFAGYA-EEVAAKLRELGIRAEADVSDNKIGYK 588 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A P ++VG++ + V ++ G M L++ + Sbjct: 589 IRQAQTHKIPYTLVVGAREREEGSVSVRKYQAGDLGAMPLDQFV 632 >gi|111219789|ref|YP_710583.1| threonyl-tRNA synthetase [Frankia alni ACN14a] gi|111147321|emb|CAJ58970.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) [Frankia alni ACN14a] Length = 682 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 2/160 (1%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G D + R+ + R G + P + DL+ SG Y +++ Sbjct: 281 KGLPLWLPNGTIIRDELEGWARQTERRLGYRRVVTPHITQEDLYFLSGHLPYYAEDLYAP 340 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + P + ++++ KSYR LP+ + +R E + G+MR+R F Sbjct: 341 IQIEGENYYLKPMNCPHHHMVYKARPKSYRELPYKIAEYGTVYRFERSGQLHGLMRARGF 400 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 DA+ + T E +K + ++ + + LG+ M Sbjct: 401 TQNDAHIY-CTREQAKEQFLEVMRMHDEYYRALGITDFYM 439 >gi|242081969|ref|XP_002445753.1| hypothetical protein SORBIDRAFT_07g025100 [Sorghum bicolor] gi|241942103|gb|EES15248.1| hypothetical protein SORBIDRAFT_07g025100 [Sorghum bicolor] Length = 508 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 5/162 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RGI+ G ++ TF+ G V S+ R + ++ + D KG Sbjct: 243 TGRGIQGATSHCLGQNFAKMFDITFENEKGVREMVWQNSWAY-TTRSIGVMVMTHGDDKG 301 Query: 338 IIWPDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFA 393 ++ P VAP ++ +I + D + ACE L++ G D G +++ Sbjct: 302 LVLPPKVAPIQVIVIAVPYKDADTTAIKGACESTVYTLNESGIRADQDTRENYSPGWKYS 361 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++ G PL++ +G K +++ +V I R G + D+ + ++ Sbjct: 362 HWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPVTNLV 403 Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 37/81 (45%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM F I+S+R+LP Q R E +RSREFL ++ ++ T Sbjct: 131 PTSETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATK 190 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 E + ++ Y RI+ Sbjct: 191 EEADEEVLQILELYRRIYEEF 211 >gi|304309881|ref|YP_003809479.1| Threonyl-tRNA synthetase [gamma proteobacterium HdN1] gi|301795614|emb|CBL43813.1| Threonyl-tRNA synthetase [gamma proteobacterium HdN1] Length = 647 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/169 (21%), Positives = 70/169 (41%), Gaps = 5/169 (2%) Query: 31 MIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDS 88 + HQ + G+ W P G V +R+ +G E+ P + LW +SG +++ Sbjct: 264 LFHQQEEAPGMVFWHPKGWAIWQKVEQYVRKVYRESGYQEVRGPQILDVSLWKKSGHWEN 323 Query: 89 YGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 Y + M + + P + I+ + + SYR LP + + R+E Sbjct: 324 YQENMF-FTESEKRTYAVKPMNCPGHVQIYNNTLHSYRELPIRYAEFGGCHRNEPSGALH 382 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 G+MR R F D + F T + + ++++ G ++I ++ Sbjct: 383 GIMRVRAFTQDDGHIF-CTEDQVQAEVTAFHRQAMKVYADFGFENISVK 430 >gi|237750837|ref|ZP_04581317.1| threonyl-tRNA synthetase [Helicobacter bilis ATCC 43879] gi|229373282|gb|EEO23673.1| threonyl-tRNA synthetase [Helicobacter bilis ATCC 43879] Length = 612 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 7/181 (3%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + P + +D+W SG Y Y KE + Sbjct: 232 GLPIWLPKGARLRRRIEELLTRALILNEYEPVRCPEILKSDVWKISGHYTHY-KENMYFT 290 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + ++++ I+SYR LP FY+ + R E G++R REF Sbjct: 291 TIDEVEYGIKPMNCVGHIKVYQNSIRSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFT 350 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ F PE ++ N + +I + G S M + P IG D E L Sbjct: 351 QDDAHIF-CRPEQIENEVNNILRFTHKIMNAFGF-SYEMELSTRPEQSIGEDSVWESATL 408 Query: 214 A 214 A Sbjct: 409 A 409 >gi|328955410|ref|YP_004372743.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Coriobacterium glomerans PW2] gi|328455734|gb|AEB06928.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Coriobacterium glomerans PW2] Length = 643 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 18/146 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + G+ +LP G + + + + E R G E+ P + +D+W SG Y Y Sbjct: 258 MFDEAGPGLPLYLPAGARVIRLMETWLSRELYRRGYQEVITPHIYKSDVWKTSGHYGYYR 317 Query: 91 KEML------------RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 M RL++ K M P H I+++ + SYR LP +++ Sbjct: 318 DNMYFFNINEGTAEEPRLSEFGVKPM-NCPGH----VLIYKNDLHSYRELPIRYFEFGTV 372 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSF 163 +R EL G+ R+R F DA+ F Sbjct: 373 YRHELSGAVNGLFRARGFTQDDAHVF 398 >gi|284166458|ref|YP_003404737.1| prolyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] gi|284016113|gb|ADB62064.1| prolyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] Length = 493 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 4/135 (2%) Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G ++ TF D ++ S+G+ + R + A+I + D +G++ P ++AP ++ Sbjct: 237 LGQSFAEAFDITFVDEDEEERTAYTTSWGL-SWRALGALIMTHSDDQGLVLPPTIAPTQV 295 Query: 350 SLINIKAHD--QVCRDACEKIYARLSKVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVIV 406 ++ I D + + E I L G V DD E+ G +F +L G PL++ + Sbjct: 296 VIVPIWQEDTKEDVLEYSENIADELEDAGFRVELDDRDERNPGFKFNEHELNGVPLRLEI 355 Query: 407 GSKFVSDSKVEIKHR 421 G V D +V + HR Sbjct: 356 GPYEVEDEEVTMVHR 370 >gi|868027|gb|AAC43605.1| threonyl-tRNA synthetase [Buchnera aphidicola] gi|1098080|prf||2115235B Thr-tRNA synthetase Length = 642 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 4/178 (2%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE-QNRTGAIEMSVPTLQSADLWVESG 84 +L + + S G+ W G + + +RE+ + E+ P L +W +SG Sbjct: 249 LLNLYHMQKESPGMIFWHNNGWIIFNELEIFVREKLKGIINYKEVKTPLLIHKSIWQKSG 308 Query: 85 RYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 +D+Y + + N + I P + IF +KSYR+LP + R+E Sbjct: 309 HWDNYQDRIFTTSSENREYCI-KPMNCPGHVQIFNCGLKSYRDLPIRMAEFGSCHRNESS 367 Query: 145 PRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 G+MR R F DA+ F T E ++ N ++ K I ++ + P Sbjct: 368 GSLHGLMRIRNFTQDDAHIF-CTQEQLRYEINNCIKMIYDLYSTFNFKKILVKFSTRP 424 >gi|268567760|ref|XP_002647866.1| C. briggsae CBR-PRS-2 protein [Caenorhabditis briggsae] Length = 258 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 40/222 (18%) Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 K+ ++A+SG GG +SHE+ V + E DF+D+ + + Sbjct: 4 KTYQVQADSGIHGGHISHEYHVRSSLEE-------DFVDY-----------CTQCGTFSK 45 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + T + +K+ +E+ H F+ GTKYS + A F+ GK Sbjct: 46 EETPKMCSRCSASPQKI------------ASVEIAHTFHLGTKYSEALGAKFQ---GKPF 90 Query: 311 YVQMGSYGIGAMRVVAAVIE-SSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKI 368 Y M +GIG R++ A I+ S K + P +++PF +I K+ V + Sbjct: 91 Y--MCCFGIGVSRLLPATIDLLSVSDKALRLPRAISPFDAVIIVKKSLMSNVIVEMTSSS 148 Query: 369 YARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSK 409 +R K G + DD E G + A+ LG P +++ ++ Sbjct: 149 ASRYLKGG--ILLDDRIEMSPGKRIHEANRLGIPFIIVLANE 188 >gi|297538938|ref|YP_003674707.1| threonyl-tRNA synthetase [Methylotenera sp. 301] gi|297258285|gb|ADI30130.1| threonyl-tRNA synthetase [Methylotenera sp. 301] Length = 635 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 80/408 (19%), Positives = 150/408 (36%), Gaps = 50/408 (12%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W P G V +R+ E+ PT+ LW +SG + +Y +E + Sbjct: 259 APGMVFWHPRGWSIWQEVEQYMRKMFRDYNYQEVRTPTIMDRTLWEKSGHWQNY-REGMF 317 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + P + IF S + SYR+LP + R+E G+MR R Sbjct: 318 VTSSESRDYAVKPMNCPGHVQIFNSSLHSYRDLPLRLAEFGSCHRNEPSGSLHGLMRVRG 377 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 F DA+ F T E + + + G + ++ + P Sbjct: 378 FTQDDAHIF-CTEEQVEAEVADFIKMLYKAYGDFGFNDVLVKLSTRP------------- 423 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE-KLFDSLPE 273 E ++ D+ T + + LN++ ++ A E L DSL Sbjct: 424 ---EKRIGTDADW-----DKAETSLANALKLNNLDFEYQPGEGAFYGPKIEFTLKDSL-- 473 Query: 274 NKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 G ++ GT +LP + A + D + H V + +G+M Sbjct: 474 -----------GRLWQCGTIQLDPNLPERLGAEYVAEDNSRKHPVMLHRAIVGSMERFIG 522 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ ++ G +W +AP ++ ++NI + D ++ L K G +D E+ Sbjct: 523 ILIENYAGAMPLW---LAPVQVMVLNISENQA---DYVRQVVEMLKKNGIRCEFDLRNEK 576 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 I + + P ++ G + + V ++ R M +E +I Sbjct: 577 ITYKIREHSMQKMPYLLVAGEREMQTGHVAVRTRKGEDLGSMPIEALI 624 >gi|219871154|ref|YP_002475529.1| threonyl-tRNA synthetase [Haemophilus parasuis SH0165] gi|254783524|sp|B8F5H9|SYT_HAEPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219691358|gb|ACL32581.1| threonyl-tRNA synthetase [Haemophilus parasuis SH0165] Length = 643 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 78/394 (19%), Positives = 144/394 (36%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +YG Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F + PE + I+ G ++I ++ + P + E Sbjct: 375 RVRGFTQDDAHIFCM-PEQVESEVTSCIKMVYDIYSTFGFENIQVKLSTRPANSIGTDEM 433 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ + + + + F I F Y + D Sbjct: 434 WNKAE-ADLAAALTANGLAFEIQEGEGAF----------------YGPKIEFALRDCLD- 475 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 R + G I + LP +SA++ D M I G++ Sbjct: 476 ---------REWQCGTI---QLDFFLPERLSASYVAEDNDRKTPVMIHRAILGSIERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 +I + G +P +AP + ++NI + +++ +LS G V D E+ Sbjct: 524 IITEEYAG---FFPAWLAPVQAVVMNITDSQA---EYVQQVVKQLSDAGLRVKADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +G + L P ++ G K +++ KV ++ R Sbjct: 578 VGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTR 611 >gi|62185526|ref|YP_220311.1| threonyl-tRNA synthetase [Chlamydophila abortus S26/3] gi|73919780|sp|Q5L4T1|SYT_CHLAB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|62148593|emb|CAH64365.1| threonyl-tRNA synthetase [Chlamydophila abortus S26/3] Length = 635 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 90/429 (20%), Positives = 159/429 (37%), Gaps = 52/429 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + KL L + + S G+ + P G D + + G E+ P L Sbjct: 236 RDHRVLGMKLDLFSQ--QECSAGMPFFHPRGMIIWDALIGYWKRLHQLAGYKEIQTPQLM 293 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 S LW SG + +Y + M L ++ I P + +++ + SY+ P +I Sbjct: 294 SRSLWEVSGHWSNYRENMYTLKIEDEDYAI-KPMNCPGCMLYYKTRLHSYKQFPLRIAEI 352 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK--- 191 R E+ G+MR R F DA+ F LTPE + + ++ GL+ Sbjct: 353 GHVHRYEVSGALSGLMRVRAFHQDDAHVF-LTPEQVEEETLNILHLVSELYSTFGLEYHL 411 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + R E IG D E A ++ + + +T F II+ Sbjct: 412 ELSTRPEKATIGSDELWELATAA-------------LERALVNSHTPF--IINPGD---- 452 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADG- 307 A Y D+H K R + G I + ++ L + A G Sbjct: 453 -GAFYGPKIDIH----------VKDAIQRTWQCGTIQLDMFLPERFEL----EYTNAQGE 497 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 K V + G++ ++ G+ +W ++P I +I + Q +K Sbjct: 498 KSTPVMLHRALFGSIERFLGILIEHFKGRFPLW---LSPEHIRVITVADRHQ---PRAQK 551 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + K+G V DD E + + A + V +G + + + + I+ R + Sbjct: 552 LATAWQKLGFVVTVDDSNESVSKKIRNAQNMQVNYMVTLGDREIEQNTLAIRTRDNRVLN 611 Query: 428 DMSLEEVIN 436 DM+ ++ +N Sbjct: 612 DMTEDKFLN 620 >gi|302528111|ref|ZP_07280453.1| threonyl-tRNA synthetase [Streptomyces sp. AA4] gi|302437006|gb|EFL08822.1| threonyl-tRNA synthetase [Streptomyces sp. AA4] Length = 415 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 2/155 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ LP G + +RE + R G +S P L +L+ SG + Y ++M Sbjct: 36 GLPYLLPDGAAIRHVLEEYVREVERRAGYQHVSSPVLGKRELYELSGHWAHYREDMFPPM 95 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM-RSREFL 156 D + ++ P+ I+RS S+R LP ++ +R EL G + R R Sbjct: 96 DLGGEQVVLRPSLCPHHALIYRSRAHSHRELPLRLAELGGMYRAELSGVLGGLSRVRAIQ 155 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + DA+ F L PE R+ LGLK Sbjct: 156 LNDAHIFCL-PEQVGAEVRGALELIRRVCQDLGLK 189 >gi|289642063|ref|ZP_06474216.1| threonyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] gi|289508136|gb|EFD29082.1| threonyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] Length = 610 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 80/397 (20%), Positives = 144/397 (36%), Gaps = 53/397 (13%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+ WLP G D + RE + G + P + +DL+ SG Y ++ Sbjct: 221 KGLPLWLPNGTIVRDELETWAREVERAHGYQRIVTPHITKSDLYYISGHLPYYADDLYSP 280 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREF 155 D + + P + ++++ +SYR LP + +R E + FG+MR R F Sbjct: 281 IDIDGEEYYLKPMNCPHHHMVYKARPRSYRELPLRLAEYGTVYRYERSGQLFGMMRVRGF 340 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 DA+ + T E + + + + + +LG++ H + L D Sbjct: 341 SQNDAHIY-CTREQAIDEFLAVMRLHALYYDKLGIEDY--------------HMVLALRD 385 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 T+ + + M D +EQ PY D+ + + Sbjct: 386 PKNTEKYHGDELMWQEAERITRD---------AMEQSGIPY--IEDIGGAAHYGPKVDFV 434 Query: 276 RVSARGIEVGHI-----FYFGTKYSLPMSATFKGADGKD------HYVQMGSYGIGAMRV 324 S G E Y ++ L TF G+ H +GS+ R Sbjct: 435 LTSVTGREFAASTNQVDLYMPEQFGL----TFTNRHGEAEQAVVLHRAPLGSH----ERF 486 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 VA +IE G +W +AP ++ ++ I D ++ RL G DD Sbjct: 487 VAFLIE-HFAGAFPVW---LAPVQVRVVPISDRQA---DGAAAVWRRLVDAGIRAELDDS 539 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + ++ A+ P ++G + + + V ++ R Sbjct: 540 DNTMQAKIRRAEQQKVPYVAVIGDRELENDSVSVRAR 576 >gi|187477891|ref|YP_785915.1| threonyl-tRNA synthetase [Bordetella avium 197N] gi|123738749|sp|Q2L2M5|SYT_BORA1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|115422477|emb|CAJ49002.1| threonyl-tRNA synthetase [Bordetella avium 197N] Length = 650 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 6/129 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G V +R G E+ P + LW ++G +D+Y + M Sbjct: 266 GLIFWHPKGWTLWQQVEQYMRAVYRDNGYQEVKAPQILDLSLWKKTGHWDNYRENMFTTE 325 Query: 98 DRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 N +YG P + IF + + SYR LP + + R+E G+MR R Sbjct: 326 SEN---RVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRVRG 382 Query: 155 FLMKDAYSF 163 F D + F Sbjct: 383 FTQDDGHIF 391 >gi|169621989|ref|XP_001804404.1| hypothetical protein SNOG_14207 [Phaeosphaeria nodorum SN15] gi|111057324|gb|EAT78444.1| hypothetical protein SNOG_14207 [Phaeosphaeria nodorum SN15] Length = 542 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 13/134 (9%) Query: 43 LPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR--- 99 LP G + + +R + + G E+ P + LW +SG +++Y ++M + R Sbjct: 96 LPNGAYVFQKLQSFLRAQYPQFGFQEVITPIIYKKSLWEKSGHWENYAEDMFSVQGRGAT 155 Query: 100 --NDKAMI-----YG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 +KA + +G P + +FR IKSYR+LP + R+E+ G+ Sbjct: 156 GQTEKAQVGEDEEFGLKPMNCPGHCLLFRDEIKSYRDLPIRYADFSALHRNEVSGSLTGL 215 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 216 TRVRRFHQDDAHIF 229 >gi|160878906|ref|YP_001557874.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|160427572|gb|ABX41135.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 652 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 5/136 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G K + + I +E+ R G + P L DL+ S ++ Y + M L Sbjct: 259 QGLPLLMPKGAKMIQTLQRWIEDEEERRGYMRTKTPLLAKKDLYEISDHWNHYKEGMFVL 318 Query: 97 ADRNDK-AMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 D D+ A ++ P +++ KSYR+LP + + FR+E G+ R Sbjct: 319 GDEEDENAEVFALRPMTCPFQYYVYKQSQKSYRDLPCRYGETSTLFRNEDSGEMHGLTRV 378 Query: 153 REFLMKDAYSFDLTPE 168 R+F + + + +TPE Sbjct: 379 RQFTISEGHLI-VTPE 393 >gi|126735278|ref|ZP_01751024.1| threonyl-tRNA synthetase [Roseobacter sp. CCS2] gi|126715833|gb|EBA12698.1| threonyl-tRNA synthetase [Roseobacter sp. CCS2] Length = 648 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 85/417 (20%), Positives = 149/417 (35%), Gaps = 54/417 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q E++ P + LW SG +D Y + Sbjct: 260 MQEEAPGQVFWHPNGWTVYTELQDYVRRKQRAGDYREINTPQVVDRKLWEASGHWDKYHE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + + A P + +F +KSYR+LP + R E Sbjct: 320 HMFVVEVEEEHAKEKAINALKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCARYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP--- 201 G+MR R F D + F E + F+++L I+ LG + + + P Sbjct: 380 LHGIMRVRGFTQDDGHIF--CTEEQIETECARFINFLADIYKDLGFEDFEIAFATRPEKR 437 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD 261 +G D S + + G + DF + + F Y D Sbjct: 438 VGSDESWDHV----EGALEAAIKSTGRDFRLEPGDGAF----------------YGPKLD 477 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYG 318 + L D+L R + G F +LP + AT+ G DG H + Sbjct: 478 FY---LTDAL-------GRTWQCG---TFQVDPNLPERLGATYIGQDGSKHRPFMLHRAT 524 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G+ ++ H GK W +AP ++ + I + D ++ L VG Sbjct: 525 LGSFERFIGILIEEHAGKLPFW---LAPRQVVVATIVSD---ADDYAMEVVNALKAVGVR 578 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+I + + P+ + +G++ V + V + SL E++ Sbjct: 579 AEADLRNEKINFKVREHSVGKVPVILALGAREVEEKTVTARRLGENKTSVTSLTEIV 635 >gi|312867885|ref|ZP_07728090.1| serine--tRNA ligase [Streptococcus parasanguinis F0405] gi|311096640|gb|EFQ54879.1| serine--tRNA ligase [Streptococcus parasanguinis F0405] Length = 425 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM V+ I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYDELEKMVVNAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|12845562|dbj|BAB26799.1| unnamed protein product [Mus musculus] Length = 722 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 85/417 (20%), Positives = 165/417 (39%), Gaps = 59/417 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y + Sbjct: 334 FHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSE 393 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M ++ + P + +F +S+R LP + R+EL G+ Sbjct: 394 NMFSFEVEKEQFAL-KPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLT 452 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSH 208 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 453 RVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD--- 507 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDV 262 I + + E Q+ EN SLN E+W A Y D+ Sbjct: 508 --IEIWNQAEKQL-------------EN-------SLNEFGEKWELNPGDGAFYGPKIDI 545 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIG 320 ++ D++ + + ++ F +++L T+ DG D V + +G Sbjct: 546 ---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAILG 594 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGCD 378 ++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K D Sbjct: 595 SVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMAD 648 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D G + + A L + ++VG K + V I+ R + + ++EE + Sbjct: 649 TDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVEETV 704 >gi|322789351|gb|EFZ14663.1| hypothetical protein SINV_09736 [Solenopsis invicta] Length = 1422 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 69/348 (19%), Positives = 127/348 (36%), Gaps = 72/348 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E +M + ++S LP Q R E + +R+REFL ++ ++ T Sbjct: 1028 PTSETIMYPAYAKWLRSDTELPLRLNQWNNVVRWEFKDPKPFLRTREFLWQEGHTAFATK 1087 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++ ++ Y R++ L ++P +V E + F D+ Sbjct: 1088 LEAEQEVLQILDMYARVYE--NLLAVP----------------VVRGRKTEKEKFAGGDY 1129 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 T + IS N R I+ Sbjct: 1130 --------TTTVEAFISTN--------------------------------GRAIQGATS 1149 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + G +S + +G + +V S+G+ R + +I D +G++ P +VAP Sbjct: 1150 HHLGQNFSKMFNIQVEGKTNEKMFVYQNSWGL-TTRTIGVMIMIHGDDQGLVLPPNVAPI 1208 Query: 348 KISLINI---------KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ--IGSQFAVAD 396 +I +I K H+ + C K+ RLSK G D E G +F + Sbjct: 1209 QIVVIPCGIAASMSESKKHELLTE--CSKLVERLSKEGKFRVKADFRENRTPGWRFNHWE 1266 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 L G P+++ +G + + ++V + R T R + + V+ + N Sbjct: 1267 LKGVPIRIELGPRDLEKNQVTLVRRDTFQRIAGNKDNVVQLVASMLKN 1314 >gi|241894947|ref|ZP_04782243.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Weissella paramesenteroides ATCC 33313] gi|241871665|gb|EER75416.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Weissella paramesenteroides ATCC 33313] Length = 699 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 10/132 (7%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W+P G + I + + + G + P L + +L+ +SG +D Y +M Sbjct: 305 GLAVWMPNGAAIRRTLERYIVDREVQDGYQHVYTPVLSNLNLYKQSGHWDHYRDDMFPPM 364 Query: 98 DRNDKAMI-----YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D D + P+H +M +++ H +SYR+LPF ++ + R E G+ R Sbjct: 365 DMGDGEFLELRPMNCPSH--IM--VYKHHQRSYRDLPFRVAELGMMHRYEKSGALTGLSR 420 Query: 152 SREFLMKDAYSF 163 RE + D ++F Sbjct: 421 VREMTLNDGHTF 432 >gi|27229277|ref|NP_149065.2| threonyl-tRNA synthetase, cytoplasmic [Mus musculus] gi|59896669|sp|Q9D0R2|SYTC_MOUSE RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|26373003|dbj|BAB27429.2| unnamed protein product [Mus musculus] gi|74177703|dbj|BAE38950.1| unnamed protein product [Mus musculus] gi|74195699|dbj|BAE39654.1| unnamed protein product [Mus musculus] gi|74223282|dbj|BAE40773.1| unnamed protein product [Mus musculus] gi|74225376|dbj|BAE31616.1| unnamed protein product [Mus musculus] gi|148671337|gb|EDL03284.1| threonyl-tRNA synthetase, isoform CRA_b [Mus musculus] Length = 722 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 85/417 (20%), Positives = 165/417 (39%), Gaps = 59/417 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y + Sbjct: 334 FHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSE 393 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M ++ + P + +F +S+R LP + R+EL G+ Sbjct: 394 NMFSFEVEKEQFAL-KPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLT 452 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSH 208 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 453 RVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD--- 507 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDV 262 I + + E Q+ EN SLN E+W A Y D+ Sbjct: 508 --IEIWNQAEKQL-------------EN-------SLNEFGEKWELNPGDGAFYGPKIDI 545 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIG 320 ++ D++ + + ++ F +++L T+ DG D V + +G Sbjct: 546 ---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAILG 594 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGCD 378 ++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K D Sbjct: 595 SVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMAD 648 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D G + + A L + ++VG K + V I+ R + + ++EE + Sbjct: 649 TDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVEETV 704 >gi|255943789|ref|XP_002562662.1| Pc20g01010 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587397|emb|CAP85430.1| Pc20g01010 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1334 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 10/128 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++ +VIE S+ + +G++ +P ++AP K+ L+ + H + +++ Sbjct: 504 SFGIG--RILYSVIEHSYWYRAGDETRGVLSFPPAIAPTKVLLVPLSTHASF-KPLTQRL 560 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 ++L K G DD IG +++ D LG P V V + V D+ ++ R T + Sbjct: 561 TSKLRKAGVSNRVDDSSASIGKRYSRNDELGTPFGVTVDFQSVQDNTFTLRDRDTTKQVR 620 Query: 429 MSLEEVIN 436 S +E++ Sbjct: 621 ASEDEILQ 628 Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171 +++PF I FR+E+ PR G++R REFLM + + + PEG K Sbjct: 238 QSMPFASASIGKSFRNEISPRAGLLRVREFLMAEIEHY-VDPEGGK 282 >gi|182419627|ref|ZP_02950872.1| threonyl-tRNA synthetase [Clostridium butyricum 5521] gi|237665561|ref|ZP_04525549.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376517|gb|EDT74094.1| threonyl-tRNA synthetase [Clostridium butyricum 5521] gi|237658508|gb|EEP56060.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 636 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 91/448 (20%), Positives = 176/448 (39%), Gaps = 54/448 (12%) Query: 8 LPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 L I N +A+ H+ + L+ + G +LP G +++ R+ Sbjct: 229 LEIHLNNLEEAKKRDHRKLGKELKLFTFAEEGPGFPFFLPKGVILKNSLIDFWRKIHYEA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E+ P + + LW SG + Y KE + + +D+ P + +++S S Sbjct: 289 GYVEVETPIMLNKKLWETSGHWYHY-KENMYTSMIDDEEFALKPMNCPGGMIVYKSDSHS 347 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+ P ++ R EL G+MR R F DA+ F + PE K + + Sbjct: 348 YRDFPMRVGELGRVHRHELSGALHGLMRVRAFTQDDAHIF-MLPEQIKSEIKGVVELIDK 406 Query: 184 IFHRLGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G K + R E +G D E+ + D+ + Sbjct: 407 VYSIFGFKYHVELSTRPEDS-MGSD--EEWKMAEDSLRGAL------------------- 444 Query: 241 DIISLNSIVEQWT-APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP-- 297 D ++L ++ + A Y D H L DS+ R + G I + LP Sbjct: 445 DELNLQYVINEGDGAFYGPKIDFH---LEDSI-------GRTWQCGTI---QLDFQLPQR 491 Query: 298 MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + G+D + H + + G++ ++ GK +P +AP ++ ++ I Sbjct: 492 FELEYVGSDNEKHRPIVIHRVIFGSIERFIGILIEHFAGK---FPTWLAPVQVKVLPISD 548 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + C+++ + ++ G V D E+IG + A P VI+G K + + Sbjct: 549 K---FNNYCDEVVKQFNENGIRVEIDQRNEKIGYKIREARNERVPYIVIIGEKEEGEGNI 605 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ R G ++++++I ++ N Sbjct: 606 SLRSRKNGDEGSINVKDLIERINNEIKN 633 >gi|197103889|ref|YP_002129266.1| threonyl-tRNA synthetase [Phenylobacterium zucineum HLK1] gi|238690165|sp|B4RE95|SYT_PHEZH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|196477309|gb|ACG76837.1| threonyl-tRNA synthetase [Phenylobacterium zucineum HLK1] Length = 658 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 9/135 (6%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H KG+ W V + +R + G E+ P + W +SG +D Y Sbjct: 262 GMVFWHEKGLTLW--------RTVESYVRRRLDEAGYQEVRTPQVLDRVFWEKSGHWDKY 313 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M + + P + IF+ KSYR+LP + R E G Sbjct: 314 RPNMFVCETEEGEELSLKPMNCPGHVQIFKFGQKSYRDLPLRMAEFGACHRYEPSGALHG 373 Query: 149 VMRSREFLMKDAYSF 163 +MR R F DA+ F Sbjct: 374 LMRVRAFTQDDAHIF 388 >gi|70950383|ref|XP_744519.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56524507|emb|CAH79733.1| hypothetical protein PC000457.03.0 [Plasmodium chabaudi chabaudi] Length = 333 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 11/165 (6%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 S R I+ Y GT ++ F+ YV S+G R + +I D KG Sbjct: 57 SGRAIQAATSHYLGTNFAKMFKIEFEDEQENKQYVHQTSWGC-TTRSIGVMIMVHSDNKG 115 Query: 338 IIWPDSVAPFKISLINI--KAHDQV-----CRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +I P +VA +K ++ I K D+ C+D EKI +++ C +F D G Sbjct: 116 LILPPNVAKYKAVIVPILYKNTDETAIFNYCKDI-EKILKN-AQINC-IFDDRDLYSPGY 172 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +F +L G P+++ VG K + ++ R + ++ E V+ Sbjct: 173 KFNHWELRGIPIRIEVGPKDIQNNSCVFVRRDNNQKFNIKKESVL 217 >gi|332030887|gb|EGI70523.1| Threonyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior] Length = 714 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G + P G + + IR E + G E+ P + ++ LW SG + Y + Sbjct: 329 HELSPGSCFFQPRGAYIYNTLVDFIRSEYRKRGFQEVVTPNIFNSKLWQTSGHWQHYAEN 388 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D + P + IF +S+R LP F + R+EL G++R Sbjct: 389 MFSF-DVEKETFALKPMNCPGHCMIFDVRCRSWRELPIRFADFGVLHRNELSGALTGLIR 447 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 448 VRRFQQDDAHIF 459 >gi|298250750|ref|ZP_06974554.1| threonyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] gi|297548754|gb|EFH82621.1| threonyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] Length = 624 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 2/142 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G D + ++ Q G + +P + DL+ SG ++ + +++ ++ Sbjct: 234 GLPLFTPKGTLVRDLLEEFVQSLQEPLGYQRVHIPHITKNDLYKTSGHWEKFQEDIFHVS 293 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ + P + T I+ S ++SYR LP ++ +RDEL G+ R R Sbjct: 294 GKSGEDFCMKPMNCPHHTQIYASRMRSYRELPIRLSEVTTVYRDELPGTLHGLSRVRAIT 353 Query: 157 MKDAYSFDLTPEGSKHSYNKMF 178 DA+ F TP+ + +++ Sbjct: 354 QDDAHVF-CTPDQVQEEVLRIY 374 >gi|220927802|ref|YP_002504711.1| prolyl-tRNA synthetase [Clostridium cellulolyticum H10] gi|259511589|sp|B8I5R4|SYP_CLOCE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219998130|gb|ACL74731.1| prolyl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 478 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/143 (20%), Positives = 68/143 (47%), Gaps = 2/143 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ + + + YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFDIQYTDKNNQLQYVHQTSWGV-TTRLIGAIIMVHGDDSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P ++AP ++ +I + H + + ++ +LS V DD + G +F+ ++ Sbjct: 284 VLPPAIAPTQLVIIPVSQHKEGVLEKANELKQKLS-AKFRVKMDDSDKMPGWKFSEYEMK 342 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G PL++ +G K + ++ + R Sbjct: 343 GVPLRIEIGPKDIEKNQAVLVRR 365 >gi|116617774|ref|YP_818145.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272025|sp|Q03YF0|SYT_LEUMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116096621|gb|ABJ61772.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 652 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 81/393 (20%), Positives = 149/393 (37%), Gaps = 48/393 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G V I +++ G + P L + +L+ SG +D Y ++M Sbjct: 266 GLPVWLPNGATIRRQVERYITDKELSNGYQHVYTPVLSNLNLYKTSGHWDHYREDMFPPM 325 Query: 98 DRNDKAMI-----YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D D + P+H +M +F +SYR LP ++ + R E G+ R Sbjct: 326 DMGDGEFLELRPMNCPSH--IM--VFNHKPRSYRELPMRIAELGMMHRYEKSGALTGLSR 381 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE + D ++F + PE + + + + ++ +K R LS+ Sbjct: 382 VREMTLNDGHTF-VEPEKLEEEFKSILTMMMGVYRDFNIKDYRFR---------LSYR-- 429 Query: 212 VLADTGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D T+ + D M + T DD+ E A Y DV + + Sbjct: 430 ---DPKNTEKYFDDDEMWEKSQKQLKTAMDDLGLDYFEAEGEAAFYGPKLDVQTKT---A 483 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAV 328 L + +S ++ F ++ L + G DG D++ V + +G M A Sbjct: 484 LGNEETLSTIQLD----FLLPERFDL----KYIGRDGLDNHRPVMLHRGIVGTMERFTAY 535 Query: 329 IESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 + + G W ++P ++ +I N+ AH +K L G + Sbjct: 536 LIEMYKGAFPTW---LSPLQVQIIPVNLGAHGNYANAVQQK----LQDAGLRANVETKDA 588 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++G A P +++G V+ + V ++ Sbjct: 589 KMGYLIREAQTNKIPYTLVLGDSEVNSNTVTVR 621 >gi|255019923|ref|ZP_05291997.1| Threonyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] gi|254970582|gb|EET28070.1| Threonyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] Length = 454 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ R G + P + LW SG D Y M + Sbjct: 72 GLVFWHPQGAQIRKVIEDYWRQAHLRGGYELLYTPHIAHEKLWFTSGHKDFYADSMFQPM 131 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + P + I+++ ++SYR+LP + ++ +R E+ G+MR R F Sbjct: 132 EDEGEPYQLKPMNCPFHILIYKNTLRSYRDLPIRWAELGTVYRHEMSGALHGLMRVRGFT 191 Query: 157 MKDAYSF 163 DA+ F Sbjct: 192 QDDAHIF 198 >gi|33152811|ref|NP_874164.1| threonyl-tRNA synthetase [Haemophilus ducreyi 35000HP] gi|71153574|sp|Q7VKR9|SYT_HAEDU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33149036|gb|AAP96553.1| threonyl-tRNA synthetase [Haemophilus ducreyi 35000HP] Length = 643 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 82/397 (20%), Positives = 146/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW +G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T E + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIESEVTACIKMVYDIYSTFGFTNIFVKLSTRPDNRIGAD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + A+ G + S + +++ I F Y + L Sbjct: 432 -DMWDRAEAGLSAAL-SANGLEYQIQHGEGAF----------------YGPKIEF---AL 470 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D L R + G + ++LP + A++ D H M I G++ Sbjct: 471 RDCL-------GREWQCGTV---QLDFALPSRLDASYVTEDNSRHTPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +I + G +W +AP + ++NI D +++ +LS G V D Sbjct: 521 FIGIITEEYAGFFPVW---LAPIQAVVMNITDSQA---DYVQQVVKQLSDAGLRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++G + L P ++ G K +++ KV ++ R Sbjct: 575 NEKVGFKVREHTLRRVPYMLVCGDKEITEGKVSVRTR 611 >gi|189499158|ref|YP_001958628.1| threonyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] gi|238692225|sp|B3EKG9|SYT_CHLPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189494599|gb|ACE03147.1| threonyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] Length = 659 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 6/132 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML-RL 96 G+ WLP G + A ++EEQ + G + + P + + DL+ SG Y Y L Sbjct: 275 GLPIWLPKGAIIRSELEAFLKEEQRKRGYVPVYTPHIGNIDLYKRSGHYPYYSDSQFPPL 334 Query: 97 ADRND----KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 ++D + + P + I+ S ++SYR+LP + +R E G++R Sbjct: 335 TYKDDLGREEQYLLKPMNCPHHHLIYSSQLRSYRDLPIRMAEFGTVYRHEQSGELNGLIR 394 Query: 152 SREFLMKDAYSF 163 +R F D++ + Sbjct: 395 ARGFTQDDSHIY 406 >gi|242090883|ref|XP_002441274.1| hypothetical protein SORBIDRAFT_09g023590 [Sorghum bicolor] gi|241946559|gb|EES19704.1| hypothetical protein SORBIDRAFT_09g023590 [Sorghum bicolor] Length = 508 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 11/165 (6%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RGI+ G ++ TF+ G V S+ R + ++ + D KG Sbjct: 243 TGRGIQGATSHCLGQNFAKMFDITFENEKGVREMVWQNSWAY-TTRSIGVMVMTHGDDKG 301 Query: 338 IIWPDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDVFWDDMGEQ----IGS 390 ++ P VAP ++ +I + D + ACE L++ G F D+ + G Sbjct: 302 LVLPPKVAPIQVIVIPVPYKDADTTAIKGACESAVYTLNQSG---FRADLDTRENYSPGW 358 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +++ ++ G PL++ +G K +++ +V I R G + D+ + ++ Sbjct: 359 KYSHWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPVTNLV 403 Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 37/81 (45%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM F I+S+R+LP Q R E +RSREFL ++ ++ T Sbjct: 131 PTSETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATK 190 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 E + ++ Y RI+ Sbjct: 191 EEADEEVLQILELYRRIYEEF 211 >gi|319778289|ref|YP_004129202.1| Threonyl-tRNA synthetase [Taylorella equigenitalis MCE9] gi|317108313|gb|ADU91059.1| Threonyl-tRNA synthetase [Taylorella equigenitalis MCE9] Length = 646 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 13/163 (7%) Query: 7 FLPILQENPRDAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H KL + H + G+ W P G V +R+ Sbjct: 236 YLTMLEE----AEKRDHRKLGKELDLFHFQDEAPGLIFWHPKGWTIWQQVEQFMRKVYVE 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSH 121 G E+ P + LW ++G +D+Y + M N + YG P + I+ S Sbjct: 292 NGYQEIKAPQILDLGLWKKTGHWDNYKENMFTTQSENRE---YGLKPMNCPGHVQIYNST 348 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + SYR LP + + R+E G+MR R F D + F Sbjct: 349 LHSYRELPIRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIF 391 >gi|258512352|ref|YP_003185786.1| prolyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479078|gb|ACV59397.1| prolyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 483 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 6/169 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R ++ Y G ++ + D + YV S+G+ + R++ A++ D +G++ Sbjct: 227 RALQTATSHYLGQNFAKSFEIQYLDKDNQLKYVYTTSWGM-STRILGAIVMVHGDDRGLV 285 Query: 340 WPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVA 395 P ++P ++ ++ I KA + V A E ++ L + V DD + G +F Sbjct: 286 LPPKLSPTQVVIVPIGPAKAREAVVAKARE-LFDALKRADIRVHLDDRDDVSPGWKFNEY 344 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +L G P+++ +G + + S+ + R TG + + L+ VI S+ Sbjct: 345 ELRGVPIRLELGPRDLEASQAVLARRDTGEKITVPLDAVIERVQALLSD 393 >gi|111225872|ref|YP_716666.1| prolyl-tRNA synthetase [Frankia alni ACN14a] gi|123337919|sp|Q0RBM4|SYP_FRAAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|111153404|emb|CAJ65160.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) [Frankia alni ACN14a] Length = 468 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 3/138 (2%) Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G ++ F GADG H S+G + R+V +I + D G+ P +AP ++ Sbjct: 230 LGQNFARAFDIDFLGADGAKHLAWTTSWG-SSTRMVGGLIMAHGDDNGLRIPPRLAPTQV 288 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGS 408 ++ ++ + V A E I A L+ G V D G G + A++ G P++V VG Sbjct: 289 VVLPVRDDETVVAKARE-IAAALTDAGLRVQVDARSGLSFGRRVTDAEIKGIPVRVEVGP 347 Query: 409 KFVSDSKVEIKHRLTGIR 426 + ++ V + R T ++ Sbjct: 348 RDLAAGNVTLVRRDTSVK 365 >gi|83859100|ref|ZP_00952621.1| threonyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] gi|83852547|gb|EAP90400.1| threonyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] Length = 613 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 9/189 (4%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 ++ RD +L L T ++ + G+ WLP G D + + R ++R G +S Sbjct: 196 EQAKRDHRKIGKELGLFT-LVEEVGAGLPMWLPAGNVIRDELEKLARITEHRAGYKRVST 254 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + DL+ SG Y ++M +++ P + I+ SYR+LP Sbjct: 255 PHITKGDLYHRSGHLPYYAEDMYAPIMIDEQEYYLRPMNCPHHHMIYAHDQWSYRDLPVR 314 Query: 132 FYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSY---NKMFVSYLRIFHR 187 + +R E G+MR R F DA+ + P+ +K + M Y R+F Sbjct: 315 LSEYGQVYRYEASGGLSGLMRVRGFCQNDAHIY-CRPDQAKDEFLAVMHMHADYYRLF-- 371 Query: 188 LGLKSIPMR 196 G++ MR Sbjct: 372 -GIQDFWMR 379 >gi|283851379|ref|ZP_06368661.1| threonyl-tRNA synthetase [Desulfovibrio sp. FW1012B] gi|283573329|gb|EFC21307.1| threonyl-tRNA synthetase [Desulfovibrio sp. FW1012B] Length = 647 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G+ + R E + G + P + +LW SG YD+Y +E + Sbjct: 262 GMPIWHPKGELVRTILEDFERREHLKRGYSLVRGPLILRRELWERSGHYDNY-RENMYFT 320 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++++ P + I++S I+SYR+LP ++++ + R E G++R R+F Sbjct: 321 EIDEQSYGIKPMNCLAHMLIYKSRIRSYRDLPQRYFELGVVHRHEKSGVLHGLLRVRQFT 380 Query: 157 MKDAY 161 DA+ Sbjct: 381 QDDAH 385 >gi|281341862|gb|EFB17446.1| hypothetical protein PANDA_008118 [Ailuropoda melanoleuca] Length = 678 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 85/417 (20%), Positives = 161/417 (38%), Gaps = 57/417 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 289 FFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVSPNIYNSRLWMTSGHWQHYS 348 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 349 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRIADFGVLHRNELSGALTGL 407 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 408 TRVRRFQQDDAHIFCAIEQIEDEI--KGCLDFLRTVYNVFGFSFKLNLSTRPEKFLGD-- 463 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + + E Q+ EN SLN E+W A Y D Sbjct: 464 ---IEVWNQAEKQL-------------EN-------SLNEFGEKWELNPGDGAFYGPKID 500 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L TF DG D V + + Sbjct: 501 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TFVSHDGDDKKRPVIVHRAIL 549 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G++ + A++ + GK WP ++P ++ ++ + C + +K+ + V Sbjct: 550 GSVERMIAILTENFGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFTV 603 Query: 380 FWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + +++G K + V I+ R + + ++ E I Sbjct: 604 DIDLDPGCTLNKKIRNAQLAQYNFILVIGEKEKASGTVNIRTRDNKVHGERTISETI 660 >gi|210615498|ref|ZP_03290625.1| hypothetical protein CLONEX_02841 [Clostridium nexile DSM 1787] gi|210150347|gb|EEA81356.1| hypothetical protein CLONEX_02841 [Clostridium nexile DSM 1787] Length = 657 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 85/413 (20%), Positives = 158/413 (38%), Gaps = 51/413 (12%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G + + I +E+ R G + P + DL+V S + Y + M L Sbjct: 262 QGLPLLMPKGAAMVQTMQRWIEDEEERRGYMRTKTPLMAKKDLYVISDHWGHYKEGMFVL 321 Query: 97 ADRN---DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 D ++ P +++ KSYR+LP + + FR+E G+ R Sbjct: 322 GDEEKEGEEVFALRPMTCPFQYYVYKQSQKSYRDLPCRYGETSTLFRNEDSGEMHGLTRV 381 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R+F + + + + P+ + + LG++ D+++ + Sbjct: 382 RQFTISEGH-LVIRPDQVEDEFKGCVDLAKYCLTTLGVEE------------DVTYR-LS 427 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP-YAATSDVHNEKLFDSL 271 LAD + M + D + +N E A Y D+ + ++ Sbjct: 428 LADPDNMDKYLGTREMWDEVEDVMRKMLDHLEINYTEETGEAAFYGPKLDIQAKNVY--- 484 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD------HYVQMGSYGIGAMRVV 325 K + I++ + ++ + TF DG+ H MG Y R + Sbjct: 485 --GKEDTMITIQLD--MFLAERFDM----TFVDKDGEKKRPYIIHRTAMGCYE----RTL 532 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDD 383 A +IE ++P + P ++ ++ I K HD + A E R + V C V D+ Sbjct: 533 AWLIEKYAG----LFPTWLCPEQVRVLPISEKYHDYANKVANE---LRGNGVKCTV--DE 583 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 E+IG + L P ++VG+K + V ++ R G L+ IN Sbjct: 584 RAEKIGYKIRETRLDRVPYMLVVGAKEEEEGVVSVRSRYLGDEGQKPLDTFIN 636 >gi|160894708|ref|ZP_02075483.1| hypothetical protein CLOL250_02259 [Clostridium sp. L2-50] gi|156863642|gb|EDO57073.1| hypothetical protein CLOL250_02259 [Clostridium sp. L2-50] Length = 591 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 2/133 (1%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +LP G + I+ ++ + G + P + + +L+ SG +D Y M Sbjct: 201 RGLPMFLPKGYIVWQELENYIKNKERKLGYRHVMTPCVGTVNLYKTSGHWDHYKDNMFPA 260 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + ++ + P + I+ + + SY++LP +I FR E G+ R R F Sbjct: 261 MEVEGESFVLRPMNCPHHMMIYANKMHSYKDLPIRIGEIAHDFRFEASGTLKGIERGRHF 320 Query: 156 LMKDAYSFDLTPE 168 DA+ F +TPE Sbjct: 321 CQNDAHLF-VTPE 332 >gi|329849735|ref|ZP_08264581.1| threonyl-tRNA synthetase [Asticcacaulis biprosthecum C19] gi|328841646|gb|EGF91216.1| threonyl-tRNA synthetase [Asticcacaulis biprosthecum C19] Length = 640 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 1/133 (0%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + +G+ W P G + A +R + +G +E+ P + W +SG ++ Y Sbjct: 254 MQEEGRGMVFWHPKGWVLWRVLEAYMRRRLDASGYVEVKTPQVLDRSFWEQSGHWEKYRA 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF+ ++SY+ LP + R E G+M Sbjct: 314 NMFVCETVEGETLSLKPMNCPGHVQIFKVGLRSYKELPIRMAEFGACHRYEPSGSLHGLM 373 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 374 RVRGFTQDDAHIF 386 >gi|254491441|ref|ZP_05104620.1| threonyl-tRNA synthetase [Methylophaga thiooxidans DMS010] gi|224462919|gb|EEF79189.1| threonyl-tRNA synthetase [Methylophaga thiooxydans DMS010] Length = 641 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 86/410 (20%), Positives = 151/410 (36%), Gaps = 46/410 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + V IR+ E+ P + LW +SG +D +G Sbjct: 255 LQEEAAGMIFWHDNGWQIYRVVENYIRDVLRDNDYQEVRTPQVVDRTLWEKSGHWDKFG- 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 +M+ ++ P + IF +KSYR+LP + R+E G+M Sbjct: 314 DMIFSTHSENRDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGTLHGLM 373 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGPIGGDLSHE 209 R R F DA+ F E S F+ L ++ G I ++ + P S E Sbjct: 374 RLRGFTQDDAHIF--CTEDQIQSEVATFIELLHEVYADFGFNEIIVKLSTRPENRVGSDE 431 Query: 210 FIVLADTGETQVFCSKDFMDFPI-PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 A+ + D +D+ + P E + I + L Sbjct: 432 VWDKAEKALEDALNAAD-LDWELQPGEGAFYGPKIEFS--------------------LK 470 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVV 325 D L +R + G I +S+P + A F D V + +G++ Sbjct: 471 DCL-------SRVWQCGTI---QVDFSMPGRLDAHFVADDNSKQVPVMLHRAILGSLERF 520 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G W +AP ++ ++ I + +K+ L K G V D Sbjct: 521 IGILIEEYAGAFPTW---LAPKQVMVMGISDKQS---EYVQKVAKDLQKQGFRVDTDLRN 574 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E+IG + L P ++VG + D+ V ++ R M LE+ + Sbjct: 575 EKIGFKIREHTLRRVPYLIVVGEREAQDNAVAVRTRKGEDLGAMQLEDFV 624 >gi|317131365|ref|YP_004090679.1| prolyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] gi|315469344|gb|ADU25948.1| prolyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] Length = 480 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 2/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y G ++ + G D Y S+G+ R++ A+I D G+ Sbjct: 227 GKALQSGTSHYLGDGFTHAFDIQYTGRDNTLKYPFQTSWGV-TTRLIGAIIMVHGDDSGL 285 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ ++ + H + ++ RL K V D G +FA ++ Sbjct: 286 VLPPRIAPTQLVIVPVAMHKPGVLEKANELLVRLQKT-LRVKLDASDNSPGWKFAEYEMK 344 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G PL++ +G + + ++ + R + ++SL+E+ Sbjct: 345 GVPLRLEIGPRDIEQNRCVVVRRDDRQKIEVSLDEL 380 >gi|270261557|ref|ZP_06189830.1| threonyl-tRNA synthetase [Serratia odorifera 4Rx13] gi|270045041|gb|EFA18132.1| threonyl-tRNA synthetase [Serratia odorifera 4Rx13] Length = 642 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E + N+ ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRAEVNECIRMVYDVYGTFGFEKIAVKLSTRPEKRIGTD 431 >gi|238879230|gb|EEQ42868.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida albicans WO-1] Length = 455 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 96/450 (21%), Positives = 176/450 (39%), Gaps = 77/450 (17%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 I+S +L+ T S G +LP G + L+ + ++ +Q + G E+ P + L Sbjct: 36 ISSKQLLYTTDPT---SPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLIFKTKL 92 Query: 80 WVESGRYDSYGKEMLRLADR---------NDKAMIYG--PTHEEVMTDIFRSHIKSYRNL 128 W +SG +D+Y +M ++ N + YG P + IF +SY+ L Sbjct: 93 WKKSGHWDNYKDDMFKVVGNDITKEEYTDNIEEHEYGLKPMNCPSHCMIFAKFDRSYQEL 152 Query: 129 PFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF----------DLTPEGSKHSYNKM 177 P + R+E G+ R R F D + F T E K +YN Sbjct: 153 PVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQIDGEIKNTLELIKDTYNVF 212 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ + + + R E IG I D E+Q+ K+ ++ N Sbjct: 213 GINEIEFY-------LSTRPEDKFIGE------IETWDIAESQL---KNVLNSTAGEGNW 256 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + E A Y DV + F NK+ I++ F ++ L Sbjct: 257 ---------ATREGDGAFYGPKIDVLLKDAF-----NKKHQVGTIQLD--FQLPNRFEL- 299 Query: 298 MSATFKGADGK-DHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI- 354 + G DGK DH + + G++ A++ + GK WP + P + ++ I Sbjct: 300 ---KYVGEDGKRDHQPILVHRAVFGSLERFFAILLDHYQGK---WPFWINPRQALIVPIN 353 Query: 355 KAHDQVCRD----------ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 ++H V + +C+ A L+ V D GE +G++ A G+ + Sbjct: 354 ESHVPVAEELQKKLSGDIVSCDNAIAPLTGFNFHVDIDKRGETVGARTKDAIQKGYSYLI 413 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 ++G K +++ ++ R ++M+ +E+ Sbjct: 414 MIGDKDIANGTFAVRSRDDRKIKNMTSDEI 443 >gi|118580723|ref|YP_901973.1| threonyl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|166225474|sp|A1ARE5|SYT_PELPD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118503433|gb|ABK99915.1| Ser-tRNA(Thr) hydrolase [Pelobacter propionicus DSM 2379] Length = 636 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 11/191 (5%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R E + G + P + +LW SG Y++Y +E + Sbjct: 263 GLVIWHPKGAMLRTILEDFERREHLKRGYDIVLGPQILKKELWQRSGHYENY-RENMYFT 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++++ P + I++SH++SYR+LP ++++ R E G++R R F Sbjct: 322 EVDEQSYGIKPMNCLAHMMIYKSHLRSYRDLPLRYFELGTVHRHERAGVLHGLLRVRGFT 381 Query: 157 MKDAYSFDLTPE---GSKHSYNKMFVSYLRIF---HRLGLKSIPMRAESGPIGGDLSHEF 210 DA+ PE G K + IF + + L + P ++ +L+ E Sbjct: 382 QDDAHIL-CAPEQLDGEIKGVLKFVSDVMAIFGFEYEMELSTRPEKSIGDDAAWELATEA 440 Query: 211 IV--LADTGET 219 ++ L DTG + Sbjct: 441 LLSALKDTGRS 451 >gi|154300294|ref|XP_001550563.1| hypothetical protein BC1G_11336 [Botryotinia fuckeliana B05.10] gi|150856659|gb|EDN31851.1| hypothetical protein BC1G_11336 [Botryotinia fuckeliana B05.10] Length = 787 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G WLP G + + + + +RE+ G E+ P + +++LW SG + Y + Sbjct: 341 HEMSPGSAMWLPHGARIYNTIMSFLREQYWTRGYEEVITPNMYNSELWKTSGHWAYYKDD 400 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R LP+ + R+E G+ R Sbjct: 401 MFTFPVEKD-TFALKPMNCPGHCLMFGHRERSHRELPWRVADFGVLHRNEASGALTGLTR 459 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 460 VRRFQQDDAHIF 471 >gi|68468847|ref|XP_721482.1| hypothetical protein CaO19.2984 [Candida albicans SC5314] gi|68469391|ref|XP_721210.1| hypothetical protein CaO19.10501 [Candida albicans SC5314] gi|46443119|gb|EAL02403.1| hypothetical protein CaO19.10501 [Candida albicans SC5314] gi|46443402|gb|EAL02684.1| hypothetical protein CaO19.2984 [Candida albicans SC5314] Length = 455 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 96/450 (21%), Positives = 176/450 (39%), Gaps = 77/450 (17%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 I+S +L+ T S G +LP G + L+ + ++ +Q + G E+ P + L Sbjct: 36 ISSKQLLYTTDPT---SPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLIFKTKL 92 Query: 80 WVESGRYDSYGKEMLRLADR---------NDKAMIYG--PTHEEVMTDIFRSHIKSYRNL 128 W +SG +D+Y +M ++ N + YG P + IF +SY+ L Sbjct: 93 WKKSGHWDNYKDDMFKVVGNDITKEEYTDNIEEHEYGLKPMNCPSHCMIFAKFDRSYQEL 152 Query: 129 PFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF----------DLTPEGSKHSYNKM 177 P + R+E G+ R R F D + F T E K +YN Sbjct: 153 PVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQIDGEIKNTLELIKDTYNVF 212 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ + + + R E IG I D E+Q+ K+ ++ N Sbjct: 213 GINEIEFY-------LSTRPEDKFIGE------IETWDIAESQL---KNVLNSTAGEGNW 256 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + E A Y DV + F NK+ I++ F ++ L Sbjct: 257 ---------ATREGDGAFYGPKIDVLLKDAF-----NKKHQVGTIQLD--FQLPNRFEL- 299 Query: 298 MSATFKGADGK-DHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI- 354 + G DGK DH + + G++ A++ + GK WP + P + ++ I Sbjct: 300 ---KYVGEDGKRDHQPILVHRAVFGSLERFFAILLDHYQGK---WPFWINPRQALIVPIN 353 Query: 355 KAHDQVCRD----------ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 ++H V + +C+ A L+ V D GE +G++ A G+ + Sbjct: 354 ESHVPVAEELQKKLSGNIVSCDNAIAPLTGFNFHVDIDKRGETVGARTKDAIQKGYSYLI 413 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 ++G K +++ ++ R ++M+ +E+ Sbjct: 414 MIGDKDIANGTFAVRSRDDRKIKNMTSDEI 443 >gi|318041217|ref|ZP_07973173.1| threonyl-tRNA synthetase [Synechococcus sp. CB0101] Length = 570 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 85/396 (21%), Positives = 150/396 (37%), Gaps = 51/396 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + + RE G + P + LW SG D Y + M Sbjct: 189 GLVFWHPRGARMRLLIENLWRELHFAAGYELLYTPHVADISLWKTSGHLDFYSESMFGPM 248 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 249 QVDEREYQLKPMNCPFHVLTYASTLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 307 Query: 156 LMKDAYSFDLTPEGSKH-----SYNKMFVSYLRIFH-RLGLKSIPMRAESGPIGGDLSHE 209 DA+ F L + S + + +S H + L + P ++ IG D E Sbjct: 308 TQDDAHVFCLPDQISDEILAILNLTEQILSTFDFRHYEINLSTRPEKS----IGEDAVWE 363 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 LA G + K + I E A Y D+ K+ D Sbjct: 364 ---LATQGLIEALDRKGWA-----------------YKIDEGGGAFYGPKIDL---KIED 400 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAV 328 ++ + S ++ F ++ L + ADG M I G++ + Sbjct: 401 AIGRMWQCSTIQLD----FNLPERFDL----EYVAADGSRQRPIMIHRAIFGSLERFFGI 452 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + ++ G W +AP +I L+ + D+V RD + A L G D G+++ Sbjct: 453 MTENYAGDFPFW---LAPEQIRLLPVT--DEV-RDYAAGVAAELQAAGVRASIDHSGDRL 506 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 G + + P+ ++G+K ++ ++ R G Sbjct: 507 GKLIRNGEQMKIPVLGVIGAKEAESGQISLRSRRDG 542 >gi|302788105|ref|XP_002975822.1| hypothetical protein SELMODRAFT_267898 [Selaginella moellendorffii] gi|300156823|gb|EFJ23451.1| hypothetical protein SELMODRAFT_267898 [Selaginella moellendorffii] Length = 420 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 79/406 (19%), Positives = 147/406 (36%), Gaps = 54/406 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + ++ R G + P + A+LW SG D Y + M Sbjct: 50 GLVFWHPKGALIRHLIEDYWKKVHLRRGYELLYTPHIAKAELWKRSGHLDFYKENMFEQI 109 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + I++ ++SYR LP F ++ +R EL G+ R Sbjct: 110 KIEEEFYQLRPMNCPFHIQIYKDRVRSYRELPIKFAELGTVYRYELSGALHGLFRD---- 165 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F L PE + + I + G ++ + + P Sbjct: 166 --DAHIFCL-PEQIRGEIKSVLDLTEEILSQFGFQNYEINLSTKP--------------- 207 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + S D + D I E A Y D+ K+ D++ + Sbjct: 208 --EKAVGSDDIWHKATEALKDAISDKGWTYGIDEGGGAFYGPKIDL---KIEDAIGRKWQ 262 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 S ++ F Y P A + + + G++ ++ S+ G Sbjct: 263 CSTIQVDFNLPERFDLTYVDPSQA-------RKQPIMIHRAIFGSIERFVGILIESYAGD 315 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL------SKVGCDVFWDDMGEQIGS 390 +W +AP + L+ + + C+++ ARL +++ C GE++ Sbjct: 316 FPLW---IAPVQARLLPVTDTEL---PYCKQVLARLREKDIRAEIAC-------GERLSK 362 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A++ PL +VG K V + ++ R G +S++EVI+ Sbjct: 363 LIRNAEVQKIPLMAVVGPKEVEAQTLTVRTRHGGELGTLSVDEVID 408 >gi|116180492|ref|XP_001220095.1| hypothetical protein CHGG_00874 [Chaetomium globosum CBS 148.51] gi|88185171|gb|EAQ92639.1| hypothetical protein CHGG_00874 [Chaetomium globosum CBS 148.51] Length = 758 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 14/146 (9%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M +S G LP G + + + +R++ R G E+ PT+ LW +SG ++Y Sbjct: 1 MTSVYSPGSPILLPNGARIFNRLIDFLRQQYVRYGFQEVITPTIYKKALWAKSGHLENYS 60 Query: 91 KEM----------LRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 +M + DR ++A YG P + IF S +SYR+LP + Sbjct: 61 DDMYTVTSTSPSRAEVTDRGEEAE-YGLKPMNCPGHCLIFASQTRSYRDLPIRYADFSPL 119 Query: 139 FRDELRPRF-GVMRSREFLMKDAYSF 163 R+E+ G+ R R F D + F Sbjct: 120 HRNEISGALSGLTRVRRFHQDDGHIF 145 >gi|322419731|ref|YP_004198954.1| threonyl-tRNA synthetase [Geobacter sp. M18] gi|320126118|gb|ADW13678.1| threonyl-tRNA synthetase [Geobacter sp. M18] Length = 636 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 87/404 (21%), Positives = 156/404 (38%), Gaps = 43/404 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+E + G + P + +LW SG Y++Y +E + Sbjct: 263 GLVIWHPKGAMLRTILEDFERKEHLKRGYDIVVGPQILKTELWQRSGHYENY-RENMYFT 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + I+RS ++SYR+LP ++++ R E G++R R F Sbjct: 322 TVDEQGYGVKPMNCLAHMMIYRSQLRSYRDLPLRYFELGTVHRHERAGVLHGLLRVRGFT 381 Query: 157 MKDAYSFDLTPEGSKHSYNKM--FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 DA+ TPE + FV+ + G EF + Sbjct: 382 QDDAHIL-CTPEQLDAEIKGVIQFVT--------------------EVMGIFGFEFEMEL 420 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T + S D + + D I E A Y D+ KL D+L + Sbjct: 421 STRPEKSIGSDDAWELATSALLNALKDSGRPFEINEGDGAFYGPKIDI---KLRDAL--D 475 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSH 333 +R I+ F ++ L T+ ADG K V + +GA+ V+ Sbjct: 476 RRWQCATIQCD--FTLPERFDL----TYVDADGEKKRPVMVHRVILGAIERFIGVLIEHF 529 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 G +P +AP + +++ + +Q+ + + L G V D E++G + Sbjct: 530 AGN---FPTWLAPVQATIVTV-TDNQI--PYAQAAFDTLRAAGVRVQKDFRNEKLGFKIR 583 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 A L P ++VG K V + ++R + M+ E+ + + Sbjct: 584 EAQLQKIPYMLVVGDKEVEGGLLAPRYRDGKNLDAMTPEQFVAF 627 >gi|229583844|ref|YP_002842345.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.27] gi|259516679|sp|C3N1B5|SYT_SULIA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|228018893|gb|ACP54300.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.27] gi|323476419|gb|ADX81657.1| threonyl-tRNA synthetase [Sulfolobus islandicus HVE10/4] Length = 545 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 11/181 (6%) Query: 18 AEIASHKLM---LRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 AE H+L+ L H+ + G+ + P GQ + + A +RE + G E+ Sbjct: 135 AEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNELIAFMREINDSMGYQEVYTSH 194 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFT 131 + D+W SG Y Y +++ D+ YG P + I++S ++YR+LP Sbjct: 195 VFKTDIWKISGHYTLYRDKLIVFNMEGDE---YGVKPMNCPAHILIYKSKPRTYRDLPIR 251 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F + +R E + +G++R R F+ D + F L + + + + ++H+ G Sbjct: 252 FSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIF-LREDQLREEIKMLISKTVEVWHKFGF 310 Query: 191 K 191 K Sbjct: 311 K 311 >gi|226293450|gb|EEH48870.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18] Length = 738 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 8/160 (5%) Query: 11 LQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +QE+ + E A + LR G + S G LP G K ++ + +++R E + Sbjct: 293 MQEHLKFLEEAEKRNHLRIGKEQDLFFFDEVSPGCPFLLPNGTKIINALQSLLRAEYRKR 352 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + +W +SG + Y +M +L D + P + +F +S Sbjct: 353 GYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHAVMFGHRERS 411 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 YR LP + R+E G+ R R+F D + F Sbjct: 412 YRELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIF 451 >gi|149027311|gb|EDL82978.1| threonyl-tRNA synthetase, isoform CRA_b [Rattus norvegicus] Length = 433 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 84/417 (20%), Positives = 162/417 (38%), Gaps = 57/417 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 44 FFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 103 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M ++ + P + +F +S+R LP + R+EL G+ Sbjct: 104 ENMFSFEVEKEQFAL-KPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 162 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 163 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 218 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + + E Q+ EN SLN E+W A Y D Sbjct: 219 ---IEIWNQAEKQL-------------EN-------SLNEFGEKWELNPGDGAFYGPKID 255 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 256 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 304 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ V Sbjct: 305 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQEFHDAKFMV 358 Query: 380 FWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + ++VG K + V I+ R + + ++ E + Sbjct: 359 DIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVGETV 415 >gi|254419068|ref|ZP_05032792.1| threonyl-tRNA synthetase [Brevundimonas sp. BAL3] gi|196185245|gb|EDX80221.1| threonyl-tRNA synthetase [Brevundimonas sp. BAL3] Length = 642 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 87/418 (20%), Positives = 142/418 (33%), Gaps = 59/418 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + +G+ W P G + A +R + G +E+ P + W +SG +D Y Sbjct: 256 MQEEGRGMVFWHPKGWILWRVLEAYMRRRLDAAGYVEVKTPQVLDRKFWEQSGHWDKYRP 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + IF +SYR LP + R E G+M Sbjct: 316 NMFVCETVEGETLSLKPMNCPGHVQIFDQGQRSYRELPLRMAEFGACHRYEPSGSLHGLM 375 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR-LGLKSIPMRAESGPIGGDLSHE 209 R R F DA+ F E F+ R H LG+++ + + P S E Sbjct: 376 RVRGFTQDDAHIF--CREDQIVEETAEFIKLARSVHADLGMETAYISLGTRPENRAGSDE 433 Query: 210 F---------IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS 260 F G V D F P D I ++I +WT Sbjct: 434 FWDKAEALMAEAARAAGTEPVVTEGDGA-FYAPKL-----DFIVKDAIGREWTCGTIQLD 487 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI- 319 V LPE + AT+ DG+ H M I Sbjct: 488 YV--------LPER-----------------------LDATYIAEDGQKHRPVMLHRAIL 516 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCD 378 G+ ++ ++ G +W +AP + + I + D RD + AR G Sbjct: 517 GSFERFIGIMIENYAGAFPLW---LAPTQAVVATITSDADDYARD----VMARFKAAGLR 569 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D E++G + + P+ +VG + V I+ + + +++EE I Sbjct: 570 TEIDLRNEKVGYKVREHSVGKVPVIAVVGRQEAEQGLVAIRRLGSQAQTVVTVEEAIR 627 >gi|51102320|gb|AAT95873.1| prolyl-tRNA synthetase [Entamoeba terrapinae] Length = 410 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 89/425 (20%), Positives = 163/425 (38%), Gaps = 75/425 (17%) Query: 24 KLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS-ADLWV 81 ++++++G+I + G Y P +N+ I + R G P S A L Sbjct: 2 QIVVQSGLIEYYDISGCYILRPAAYGIWENIQQFIDKRIKRMGVENTYFPCFVSQAALKK 61 Query: 82 ESGRYDSYGKEMLRLADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQL 137 E + + E+ + + + PT E VM F++ I +R+LP Q Sbjct: 62 EEDELNGFTPEVAWVTKSGSSDLQEPIALRPTSETVMYPAFKNWITGHRDLPLKVNQWCN 121 Query: 138 KFRDELRPRFGVMRSREFLMKDAY-SFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R E + +R+REFL ++ + ++ P+ K M + Y ++ L ++P+ Sbjct: 122 VVRWEFSHPYPFIRTREFLWQEGHTAYANQPDCEKECRQIMEL-YASVYE--DLLAVPV- 177 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 I G S GET FP A Y Sbjct: 178 -----IRGKKSK--------GET----------FP---------------------GAYY 193 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 + T + +P N R ++ + G +S F+ + K V S Sbjct: 194 SLTVEC-------IIPTN----GRSVQAATSHHLGQTFSKLFGIEFEDINKKKQLVYQNS 242 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 +G+ + R + + + D KGI+ P A ++ +I I H D + L+++ Sbjct: 243 WGL-STRSIGVTVMTHGDDKGIVIPPRAANKQVVIITIH-HKGSPNDEMDAKANELTEML 300 Query: 377 CD----VFWD--DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 D F D DM G +F+ ++ G P+++ +G + + SKV I R G + + S Sbjct: 301 LDNDIRAFADTNDM-HNPGWKFSEYEMRGIPIRIELGQRDYAGSKVVIVRRDNGAKCESS 359 Query: 431 LEEVI 435 +++ Sbjct: 360 WTDLV 364 >gi|49168658|emb|CAE02700.1| putative threonyl tRNA synthase [Yarrowia lipolytica] Length = 461 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 84/434 (19%), Positives = 170/434 (39%), Gaps = 68/434 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I S G +LP GQ+ + +R + G E+S P + LW +SG ++ + Sbjct: 59 ISPESPGSAFFLPHGQRIYSRLGEFMRLQLRVFGFQEISSPIMYKNSLWKQSGHWEKFQD 118 Query: 92 EMLRLADRNDKAMI-----YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 +M R+ +++ + P + +F S +SYR LP + R+E Sbjct: 119 DMFRVQPGHEETSVEEEFSLKPMNCPGHCLLFNSLKRSYRELPLRYSDFSPLHRNEASGA 178 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+ R R F D + F TPE + ++ + ++ GL + Sbjct: 179 LIGLTRVRRFHQDDGHIF-CTPEQVESEISRALKLVQQTYNTFGL--------------E 223 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY------AAT 259 +S +VL+ ET + + + D +E +L S+++ W+ A Sbjct: 224 ISR--VVLSTRPETFIGDIEQWND----AEK-------ALTSVLDSWSVSKGKWELNAGD 270 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHI-FYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 + K+ D L ++K + F ++ L F ++ V + Sbjct: 271 GAFYGPKI-DILVKDKHGKEHQTATTQLDFQLPERFQLKY---FDASETAQRPVMVHRAV 326 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG-- 376 G++ A++ ++GK WP ++P + ++ + + + EK+ A+LS + Sbjct: 327 YGSLERFLAILIDHYEGK---WPLWLSPRQCMVLPV---GEAQNEFAEKVAAQLSGLPSI 380 Query: 377 -------------CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 CDV D E +G + A G+ ++G K + + KV ++ Sbjct: 381 TDQSTPLSASTLFCDV--DTRSETLGQKIKQARNEGYSYIAVIGDKEMQEGKVTVQKPGK 438 Query: 424 GIREDMSLEEVINY 437 R+ ++++E ++ Sbjct: 439 KDRQLLTVDEARDF 452 >gi|331001642|ref|ZP_08325165.1| threonyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] gi|330413363|gb|EGG92730.1| threonyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] Length = 651 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 5/159 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIRE-EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ LP G K + + I + E N G + P + +DL+ SG +D Y M Sbjct: 259 QGLPLMLPKGTKMIQKLQRWIEDLEDNEWGYVRTKTPLMAKSDLYKISGHWDHYQDGMFI 318 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 L D + I P ++++ KSYR+LP+ + FR+E G+ R Sbjct: 319 LGDPQNDGEILALRPMTCPFQYYVYKNTQKSYRDLPYRMGETSTLFRNEDSGEMHGLTRV 378 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 R+F + + ++ + P+ ++ + + LGL+ Sbjct: 379 RQFTISEGHNV-IRPDQAEEELQNCLNLAIYVLDILGLR 416 >gi|225550529|ref|ZP_03771478.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379683|gb|EEH02045.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 580 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 82/404 (20%), Positives = 166/404 (41%), Gaps = 47/404 (11%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G V I E + + + P L S DL+ SG +D Y + Sbjct: 198 QGLPIWLPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDLYKTSGHWDHYKDNIFSP 257 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ +I P T ++ + ++SYR+LP + + R E G R RE Sbjct: 258 VQIDNEVLILRPMTCPHHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLTGFERVREM 317 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 +++D + F P+ +H F LG+K+ + + L D Sbjct: 318 ILEDCHVF-CRPDQIEHEVINAFKMIQEAQEGLGIKTFEIH--------------LSLND 362 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY---AATSDVHNEKLFDSLP 272 + + + D P E++ +L +++ PY + + K+ + Sbjct: 363 PNDKE-----KYYDDPQMWEHSQN----ALRKMLKDHKIPYKEMVGEAAFYGPKIDFQV- 412 Query: 273 ENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAA 327 K V R I V I F +++L ++ + + M GI R++A Sbjct: 413 --KTVLNRIITVSTIQLDFLLPNRFNL----SYINENNEQSTPVMIHIGIIGTYERLLAI 466 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++E + KG++ P ++P ++ +I + ++ + D +++ A+L K D E+ Sbjct: 467 LLEQT---KGVL-PLWLSPVQVVIIPV--NENLHADYAKELNAKLRKHLVRSSLDLRNER 520 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 + + A + P Q++VG + + + K+ + +R G E ++ Sbjct: 521 LSKKIREAQIQKIPYQIVVGDEEIKNDKM-VTYRRYGSEETTTV 563 >gi|185179115|ref|ZP_02964840.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024051|ref|ZP_02996803.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518364|ref|ZP_03003871.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|225551314|ref|ZP_03772260.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|184209012|gb|EDU06055.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019085|gb|EDU57125.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998237|gb|EDU67334.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|225379129|gb|EEH01494.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 580 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 82/404 (20%), Positives = 166/404 (41%), Gaps = 47/404 (11%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G V I E + + + P L S DL+ SG +D Y + Sbjct: 198 QGLPIWLPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDLYKTSGHWDHYKDNIFSP 257 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ +I P T ++ + ++SYR+LP + + R E G R RE Sbjct: 258 VQIDNEVLILRPMTCPHHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLTGFERVREM 317 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 +++D + F P+ +H F LG+K+ + + L D Sbjct: 318 ILEDCHVF-CRPDQIEHEVINAFKMIQEAQEGLGIKTFEIH--------------LSLND 362 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY---AATSDVHNEKLFDSLP 272 + + + D P E++ +L +++ PY + + K+ + Sbjct: 363 PNDKE-----KYYDDPQMWEHSQN----TLRKMLKDHKIPYKEMVGEAAFYGPKIDFQV- 412 Query: 273 ENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAA 327 K V R I V I F +++L ++ + + M GI R++A Sbjct: 413 --KTVLNRIITVSTIQLDFLLPNRFNL----SYINENNEQSTPVMIHIGIIGTYERLLAI 466 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++E + KG++ P ++P ++ +I + ++ + D +++ A+L K D E+ Sbjct: 467 LLEQT---KGVL-PLWLSPVQVVIIPV--NENLHADYAKELNAKLRKHLVRSSLDLRNER 520 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 + + A + P Q++VG + + + K+ + +R G E ++ Sbjct: 521 LSKKIREAQIQKIPYQIVVGDEEIKNDKM-VTYRRYGSEETTTV 563 >gi|284996685|ref|YP_003418452.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] gi|284444580|gb|ADB86082.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] Length = 545 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 11/181 (6%) Query: 18 AEIASHKLM---LRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 AE H+L+ L H+ + G+ + P GQ + + A +RE + G E+ Sbjct: 135 AEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNELIAFMREINDSMGYQEVYTSH 194 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFT 131 + D+W SG Y Y +++ D+ YG P + I++S ++YR+LP Sbjct: 195 VFKTDIWKISGHYTLYRDKLIVFNMEGDE---YGVKPMNCPAHILIYKSKPRTYRDLPIR 251 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F + +R E + +G++R R F+ D + F L + + + + ++H+ G Sbjct: 252 FSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIF-LREDQLREEIKMLISKTVEVWHKFGF 310 Query: 191 K 191 K Sbjct: 311 K 311 >gi|227826680|ref|YP_002828459.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.14.25] gi|259516736|sp|C3MUC7|SYT_SULIM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|227458475|gb|ACP37161.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.14.25] Length = 545 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 11/181 (6%) Query: 18 AEIASHKLM---LRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 AE H+L+ L H+ + G+ + P GQ + + A +RE + G E+ Sbjct: 135 AEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNELIAFMREINDSMGYQEVYTSH 194 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFT 131 + D+W SG Y Y +++ D+ YG P + I++S ++YR+LP Sbjct: 195 VFKTDIWKISGHYTLYRDKLIVFNMEGDE---YGVKPMNCPAHILIYKSKPRTYRDLPIR 251 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F + +R E + +G++R R F+ D + F L + + + + ++H+ G Sbjct: 252 FSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIF-LREDQLREEIKMLISKTVEVWHKFGF 310 Query: 191 K 191 K Sbjct: 311 K 311 >gi|74142262|dbj|BAE31895.1| unnamed protein product [Mus musculus] Length = 722 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 85/417 (20%), Positives = 164/417 (39%), Gaps = 59/417 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y + Sbjct: 334 FHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSE 393 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M ++ + P + +F +S+R LP + R+EL G+ Sbjct: 394 NMFSFEVEKEQFAL-KPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLT 452 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSH 208 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 453 RVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD--- 507 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDV 262 I + + E Q+ EN SLN E+W A Y D+ Sbjct: 508 --IEIWNQAEKQL-------------EN-------SLNEFGEKWELNPGDGAFYGPKIDI 545 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIG 320 ++ D++ + + ++ F +++L T+ DG D V + +G Sbjct: 546 ---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAILG 594 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGCD 378 ++ + A++ + GK WP ++P ++ ++ + C + +K+ + +K D Sbjct: 595 SVERMIAILTEKYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMAD 648 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D G + + A L + ++VG K + V I+ R + + ++EE + Sbjct: 649 TDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVEETV 704 >gi|213623005|ref|ZP_03375788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 523 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSD 431 >gi|295664831|ref|XP_002792967.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] gi|226278488|gb|EEH34054.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] Length = 764 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 8/160 (5%) Query: 11 LQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +QE+ + E A + LR G + S G LP G K ++ + +++R E + Sbjct: 318 MQEHLKFLEEAEKRNHLRIGKEQDLFFFDEVSPGCPFLLPNGTKIINALQSLLRAEYRKR 377 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + +W +SG + Y +M +L D + P + +F +S Sbjct: 378 GYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHAVMFGHRERS 436 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 YR LP + R+E G+ R R+F D + F Sbjct: 437 YRELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIF 476 >gi|167043404|gb|ABZ08106.1| putative tRNA synthetase class II core domain (G, H, P, S and T) [uncultured marine microorganism HF4000_APKG1C9] Length = 506 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 31/148 (20%), Positives = 74/148 (50%), Gaps = 2/148 (1%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + R ++V ++ +++ + T++ +G+ + ++G+ + R++ A++ D G Sbjct: 246 NGRTLQVATYHHYRDQWARAFNLTYEDRNGETQFCHQTTFGM-SERLLGAIVGMHGDDSG 304 Query: 338 IIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 +I P S+AP ++ L+ + AH D+ E + L G V D + G++ + Sbjct: 305 LIMPPSIAPIQVILMPVAAHSDENVIPRVEALALDLQDSGFRVQVDARDLRPGTKHYDWE 364 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + G P+++ +G + ++ S+ I R G Sbjct: 365 IKGVPIRLEIGPRDLASSQCTITLRTGG 392 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 71/184 (38%), Gaps = 27/184 (14%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDS-------- 88 KG+ W P G KA+ ++ + R + RTG E + P L DL + + S Sbjct: 38 KGMDVWKPYGWKAMTLIDGLTRSQMRRTGHEEYNFPLLVPEDLLDKENQLVSHLKASRDT 97 Query: 89 ---------------YGKEMLRLADRNDK----AMIYGPTHEEVMTDIFRSHIKSYRNLP 129 + KE+ + D M PT E M +F I+S+ +LP Sbjct: 98 GIDASELRVDEEEAGFKKEVYWVKHGGDTELEVPMFLRPTSETPMYTMFSLWIRSHADLP 157 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 +QI FR E + +R RE +A++ +G+ + R+ H L Sbjct: 158 LKTFQIVNTFRYETKQTRSFIRVREIHFFEAHTVHADQDGATAQIAEDAEIVQRLLHELC 217 Query: 190 LKSI 193 +I Sbjct: 218 FPAI 221 >gi|225684056|gb|EEH22340.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03] Length = 738 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 8/160 (5%) Query: 11 LQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +QE+ + E A + LR G + S G LP G K ++ + +++R E + Sbjct: 293 MQEHLKFLEEAEKRNHLRIGKEQDLFFFDEVSPGCPFLLPNGTKIINALQSLLRAEYRKR 352 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + +W +SG + Y +M +L D + P + +F +S Sbjct: 353 GYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHAVMFGHRERS 411 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 YR LP + R+E G+ R R+F D + F Sbjct: 412 YRELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIF 451 >gi|170744367|ref|YP_001773022.1| threonyl-tRNA synthetase [Methylobacterium sp. 4-46] gi|168198641|gb|ACA20588.1| threonyl-tRNA synthetase [Methylobacterium sp. 4-46] Length = 670 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + G+ W P G + A +R + + E++ P + LW SG +D Y + Sbjct: 257 QEEGPGVVFWHPKGWTLFQELIAYMRR-RLKADYREVNAPQILDKALWETSGHWDWYREN 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +++ P + IF+ +KSYR+LP + R E G+MR Sbjct: 316 MFVTKTEDERVFAIKPMNCPGHVQIFKHGLKSYRDLPLRLAEFGAVSRYEPSGALHGLMR 375 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 376 VRAFTQDDAHVF 387 >gi|78357681|ref|YP_389130.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123741221|sp|Q30Y11|SYT_DESDG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78220086|gb|ABB39435.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 644 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 2/125 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+E + G + P + +LW +SG YD+Y +E + Sbjct: 261 GMVYWHPKGALVRAILEDFERKEHLKRGYQIVQTPQILRRELWEKSGHYDNY-RENMYFT 319 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D +++ P + I++S SYR+LP +++ + R E G++R R+F Sbjct: 320 DIDEQPYGVKPMNCVAHMLIYKSRSHSYRDLPVRLFELGVVHRHEKSGVLHGLLRVRQFT 379 Query: 157 MKDAY 161 DA+ Sbjct: 380 QDDAH 384 >gi|330829614|ref|YP_004392566.1| Threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Aeromonas veronii B565] gi|328804750|gb|AEB49949.1| Threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Aeromonas veronii B565] Length = 642 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 80/394 (20%), Positives = 138/394 (35%), Gaps = 42/394 (10%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR + E+ P + LW SG ++ Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGPFMMDRVLWERSGHWEKYAQ 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T E + ++ G ++I ++ + P S E Sbjct: 375 RVRGFTQDDAHIF-CTEEQIMEEVSGCIRMVYDVYGTFGFENIVVKLSTRPEQRIGSDEM 433 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ + P E + I L D Sbjct: 434 WDRAEKALAEALELNGLKYDLQPGEGAFYGPKIEFT--------------------LHDC 473 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 L R + G + ++LP + AT+ G + H M I G++ Sbjct: 474 LD-------RAWQCGTV---QLDFALPGRLGATYVGENNDRHVPVMIHRAILGSIERFIG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ + G ++P +AP + ++NI + D K+ L+ G D E+ Sbjct: 524 ILTEEYAG---LFPTWLAPTQAVVMNITDNQA---DYAVKVAKALNDAGLRAKADLRNEK 577 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + L P ++ G K V K+ ++ R Sbjct: 578 IGFKIREHTLKRVPFMLVCGDKEVEAGKIAVRTR 611 >gi|299144001|ref|ZP_07037081.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518486|gb|EFI42225.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 639 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 92/441 (20%), Positives = 168/441 (38%), Gaps = 55/441 (12%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L T +H G + P G + + R Sbjct: 232 EYIERIEEAEKRDHRKLGRELDLFT--MHDEGPGFPFFHPNGMILRNELLGWWRNVLIEN 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + + LW SG +D Y + M D D A+ P + T ++ ++ Sbjct: 290 GYGEIQTPIILNEALWHRSGHWDHYKENMYFTKIDGEDYAV--KPMNCPGSTIVYSTNPH 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP + R EL G+ R R F DA+ + L P + KM Sbjct: 348 SYRELPIRLSEFGQVHRHELSGALHGLFRVRTFTQDDAHVYCL-PSQIEEEVFKMIDLAD 406 Query: 183 RIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G K S+ + GD+ +T +++ + + +N + Sbjct: 407 YLYSTFGFKYSVELSTRPEDFMGDI--------ETWNK----AEESLKVALEKKNIKY-- 452 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLPM 298 SI E A Y D H E +G + GT + +P+ Sbjct: 453 -----SINEGDGAFYGPKIDFHLEDA----------------IGRTWQCGTIQLDFQMPV 491 Query: 299 S--ATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + T+ G K V + +G++ ++ GK +W ++P ++ +I + Sbjct: 492 NFDLTYINEKGEKARPVMLHRALLGSVERFMGILIEHFAGKFPLW---LSPIQVEIIPV- 547 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + + +++ +L G V+ D+ E++G + A L ++VG + V+ K Sbjct: 548 --SEKFAEFAKELEIKLKNTGLKVYLDERAEKVGYKIREAQLKKINYMLVVGEQEVNSGK 605 Query: 416 VEIKHRLTGIREDMSLEEVIN 436 + ++ R +D +EE IN Sbjct: 606 LSVRKRNGEEIKDCEVEEFIN 626 >gi|15899227|ref|NP_343832.1| threonyl-tRNA synthetase [Sulfolobus solfataricus P2] gi|229578099|ref|YP_002836497.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|229583311|ref|YP_002841710.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] gi|22654132|sp|Q97VW8|SYT_SULSO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|259516740|sp|C3NMY1|SYT_SULIN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|259516744|sp|C3N9B3|SYT_SULIY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|13815789|gb|AAK42622.1| Threonyl-tRNA synthetase (thrS) [Sulfolobus solfataricus P2] gi|228008813|gb|ACP44575.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|228014027|gb|ACP49788.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] Length = 545 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 11/181 (6%) Query: 18 AEIASHKLM---LRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 AE H+L+ L H+ + G+ + P GQ + + A +RE + G E+ Sbjct: 135 AEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNELIAFMREINDSMGYQEVYTSH 194 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFT 131 + D+W SG Y Y +++ D+ YG P + I++S ++YR+LP Sbjct: 195 VFKTDIWKISGHYTLYRDKLIVFNMEGDE---YGVKPMNCPAHILIYKSKPRTYRDLPIR 251 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F + +R E + +G++R R F+ D + F L + + + + ++H+ G Sbjct: 252 FSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIF-LREDQLREEIKMLISKTVEVWHKFGF 310 Query: 191 K 191 K Sbjct: 311 K 311 >gi|284054770|ref|ZP_06384980.1| threonyl-tRNA synthetase [Arthrospira platensis str. Paraca] Length = 525 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 2/132 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ + G + P + + LW SG YD Y + M Sbjct: 244 GLVFWHPKGSRMRLLIEDYWRQAHLQGGYELLYTPHIANLALWKTSGHYDFYRENMFDQI 303 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +++ P + ++SH+ SYR LP + ++ +R E G+MR R F Sbjct: 304 EIENQSYQLKPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYERSGVLHGLMRVRGFT 363 Query: 157 MKDAYSFDLTPE 168 DA+ F L PE Sbjct: 364 QDDAHIFCL-PE 374 >gi|227829326|ref|YP_002831105.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|259516733|sp|C3MKT5|SYT_SULIL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|227455773|gb|ACP34460.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] Length = 545 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 11/181 (6%) Query: 18 AEIASHKLM---LRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 AE H+L+ L H+ + G+ + P GQ + + A +RE + G E+ Sbjct: 135 AEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNELIAFMREINDSMGYQEVYTSH 194 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFT 131 + D+W SG Y Y +++ D+ YG P + I++S ++YR+LP Sbjct: 195 VFKTDIWKISGHYTLYRDKLIVFNMEGDE---YGVKPMNCPAHILIYKSKPRTYRDLPIR 251 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F + +R E + +G++R R F+ D + F L + + + + ++H+ G Sbjct: 252 FSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIF-LREDQLREEIKMLISKTVEVWHKFGF 310 Query: 191 K 191 K Sbjct: 311 K 311 >gi|171920625|ref|ZP_02695822.2| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188524282|ref|ZP_03004325.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867906|ref|ZP_03079904.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273446|ref|ZP_03205982.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554092|ref|YP_002284982.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|238065120|sp|B5ZC42|SYT_UREU1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|171903344|gb|EDT49633.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195660016|gb|EDX53396.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660383|gb|EDX53642.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249966|gb|EDY74746.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541593|gb|ACI59822.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 580 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 82/404 (20%), Positives = 166/404 (41%), Gaps = 47/404 (11%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G V I E + + + P L S DL+ SG +D Y + Sbjct: 198 QGLPIWLPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDLYKTSGHWDHYKDNIFSP 257 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ +I P T ++ + ++SYR+LP + + R E G R RE Sbjct: 258 VQIDNEVLILRPMTCPHHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLTGFERVREM 317 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 +++D + F P+ +H F LG+K+ + + L D Sbjct: 318 ILEDCHVF-CRPDQIEHEVINAFKMIQEAQEGLGIKTFEIH--------------LSLND 362 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY---AATSDVHNEKLFDSLP 272 + + + D P E++ +L +++ PY + + K+ + Sbjct: 363 PNDKE-----KYYDDPQMWEHSQN----ALRKMLKDHKIPYKEMVGEAAFYGPKIDFQV- 412 Query: 273 ENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAA 327 K V R I V I F +++L ++ + + M GI R++A Sbjct: 413 --KTVLNRIITVSTIQLDFLLPNRFNL----SYINENNEQSTPVMIHIGIIGTYERLLAI 466 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++E + KG++ P ++P ++ +I + ++ + D +++ A+L K D E+ Sbjct: 467 LLEQT---KGVL-PLWLSPVQVVIIPV--NENLHADYAKELNAKLRKHLVRSSLDLRNER 520 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 + + A + P Q++VG + + + K+ + +R G E ++ Sbjct: 521 LSKKIREAQIQKIPYQIVVGDEEIKNDKM-VTYRRYGSEETTTV 563 >gi|113954220|ref|YP_731070.1| threonyl-tRNA synthetase [Synechococcus sp. CC9311] gi|123031674|sp|Q0I902|SYT_SYNS3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|113881571|gb|ABI46529.1| threonyl-tRNA synthetase [Synechococcus sp. CC9311] Length = 617 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 86/407 (21%), Positives = 152/407 (37%), Gaps = 45/407 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ G + P + LW SG D Y + M Sbjct: 229 GLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYTPHVADISLWKTSGHLDFYAESMFGPM 288 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 + +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 289 EVDERQYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 347 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIV 212 DA+ F L PE ++ RI + + + P IG D E Sbjct: 348 TQDDAHVFCL-PEQISDEILRILNLTERILSTFDFSNYEINLSTKPDKAIGDDAVWE--- 403 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 LA G + K + I E A Y D+ K+ D++ Sbjct: 404 LATKGLIEALKRKGWA-----------------YKIDEGGGAFYGPKIDL---KIEDAIG 443 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIES 331 + S ++ F ++ L + ADG M I G++ ++ Sbjct: 444 RMWQCSTIQLD----FNLPERFEL----DYIAADGSKQRPIMIHRAIFGSLERFFGIMTE 495 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++ G W +AP +I L+ + D+V A E+ +L G D G+++G Sbjct: 496 NYAGDFPFW---LAPEQIRLLPVT--DEVLGYA-EEFQNQLKAAGIRASIDRSGDRLGKL 549 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 + + + P+ ++G+K ++ R G ++ E +I A Sbjct: 550 IRIGEKMKIPVLAVIGAKEAEQGAASLRSRRDGDLGVITKERLIATA 596 >gi|147899539|ref|NP_001087812.1| threonyl-tRNA synthetase [Xenopus laevis] gi|51895835|gb|AAH81263.1| MGC86352 protein [Xenopus laevis] Length = 721 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 83/416 (19%), Positives = 163/416 (39%), Gaps = 57/416 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + IR+E + G E+ P + ++ LW SG + Y + Sbjct: 333 FHELSPGSCFFLPKGAYIYNQLIGFIRQEYRKRGFQEVVTPNVYNSKLWQTSGHWQHYSE 392 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +S+R LP + R+EL G+ Sbjct: 393 NMFSF-EVEKEIFALKPMNCPGHCLMFDHRPRSWRELPMRMADFGVLHRNELSGALTGLT 451 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLK-SIPMRAESGPIGGDLSH 208 R R F DA+ F + + K + +LR +++ G + + GD Sbjct: 452 RVRRFQQDDAHIFCAMEQIEEEI--KSCLDFLRSVYNVFGFTFKLNLSTRPEKFLGD--- 506 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDV 262 I + + E Q+ EN SLN E+W A Y D+ Sbjct: 507 --IEVWNQAEKQL-------------EN-------SLNEFGEKWVLNPGDGAFYGPKIDI 544 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIG 320 ++ D++ + + ++ F +++L T+ DG D V + +G Sbjct: 545 ---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIIHRAILG 593 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ + A++ + GK WP ++P ++ ++ + C + +++ + + G Sbjct: 594 SVERMIAILTENFGGK---WPLWLSPQQVMVVPVGP---TCDEYAQQVREQFHRAGLMTD 647 Query: 381 WD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + ++VG K + V I+ R + + ++ E I Sbjct: 648 VDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASETVNIRTRDNKVHGERTVTETI 703 >gi|323473769|gb|ADX84375.1| threonyl-tRNA synthetase [Sulfolobus islandicus REY15A] Length = 545 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 11/181 (6%) Query: 18 AEIASHKLM---LRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 AE H+L+ L H+ + G+ + P GQ + + A +RE + G E+ Sbjct: 135 AEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNELIAFMREINDSMGYQEVYTSH 194 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFT 131 + D+W SG Y Y +++ D+ YG P + I++S ++YR+LP Sbjct: 195 VFKTDIWKISGHYTLYRDKLIVFNMEGDE---YGVKPMNCPAHILIYKSKPRTYRDLPIR 251 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F + +R E + +G++R R F+ D + F L + + + + ++H+ G Sbjct: 252 FSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIF-LREDQLREEIKMLISKTVEVWHKFGF 310 Query: 191 K 191 K Sbjct: 311 K 311 >gi|315930217|gb|EFV09332.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305] Length = 602 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 92/448 (20%), Positives = 176/448 (39%), Gaps = 51/448 (11%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD +L L T + G+ WL G + + ++ + Sbjct: 195 KEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRL 253 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L AD W SG Y +Y KE + +++ P + I++S ++ Sbjct: 254 RGYEPVRGPELLKADAWKISGHYANY-KENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVR 312 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM-FV-S 180 SYR+LP F++ + R E G+ R REF DA+ F + + + + FV + Sbjct: 313 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDN 372 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +++F D S+E + T + + + + D Sbjct: 373 LMKLF-------------------DFSYEMEI--STKPEKAIGDDEIWEIATKALKEALD 411 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ K+ D+L R + G I ++LP Sbjct: 412 EQGLKYGIDEGGGAFYGPKIDI---KITDAL-------KRKWQCGTI---QVDFNLPSRF 458 Query: 301 TFKGADG---KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KA 356 + D K V + +G+ ++ G+ +P +AP + ++ I +A Sbjct: 459 KLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGE---FPFFIAPTAVGIVPIGEA 515 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 H D ++I L ++ D + E + + +A+ P+ +++G V+ V Sbjct: 516 H----IDYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSV 571 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ R ++++SL+E I + S Sbjct: 572 ALRDRRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|302537186|ref|ZP_07289528.1| prolyl-tRNA synthetase [Streptomyces sp. C] gi|302446081|gb|EFL17897.1| prolyl-tRNA synthetase [Streptomyces sp. C] Length = 470 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 80/449 (17%), Positives = 172/449 (38%), Gaps = 85/449 (18%) Query: 1 MRRSKYFLPILQENPR-------DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 M ++ P ++ PR AE+A + + T +I + G++ ++ + Sbjct: 1 MAKAPVLTPQAEDFPRWYQDLINKAELADNGPVRGTMVIRPYGYGLW------ERMQQEM 54 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM----IYGPT 109 +A I+E + + +P + L E+ + + E+ + K + + PT Sbjct: 55 DARIKEAGAQNAYFPLFIP---QSYLTKEAEHVEGFAPELAVVTHGGGKELEEPVVVRPT 111 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEG 169 E ++ D F ++SYR+LP Q R E MR R FL + L EG Sbjct: 112 SETIINDYFSKWVQSYRDLPLLINQWANVVRWE-------MRPRVFLRTSEF---LWQEG 161 Query: 170 -SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 + H+ + Y HR D+ +F+ Sbjct: 162 HTAHATYEDARDYAARIHR-----------------DVYGDFMT---------------- 188 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 +++ ++ ++ + TA ++ L E + +++G Sbjct: 189 ------------NVLGIDVVLGRKTAKERFAGAINTLTL-----EGMMGDGKALQMGTSH 231 Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 GT ++ + + +G+ V S+G+ + R+V +I S D G+ P +A + Sbjct: 232 ELGTNFAKAFNTQYLSKEGQQELVWQTSWGV-STRMVGGLIMSHGDDNGLRVPPRLANVQ 290 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVG 407 + ++ IK + V + ++ RL G V DD + G + +L G P+++ +G Sbjct: 291 VVVMAIKGDEAVAK--VRELGDRLKAAGIRVHVDDRVDTPFGRRAVDWELKGVPVRIEIG 348 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + + + R+ G + + ++ +++ Sbjct: 349 PRDLEAGTAMLARRIPGGKTPVQIDALVD 377 >gi|83954081|ref|ZP_00962801.1| threonyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] gi|83841118|gb|EAP80288.1| threonyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] Length = 649 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 78/399 (19%), Positives = 137/399 (34%), Gaps = 50/399 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W G + +R +Q G +E++ P + LW SG ++ Y Sbjct: 260 MQEEAPGQVFWHANGWLIYTQLQDYMRRKQRAGGYVEVNTPQVVDRKLWEASGHWEKYQD 319 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + IF +KSYR+LP + R E Sbjct: 320 HMFIVEVDEEHAREKSVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGA 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPIGG 204 G+MR R F D + F E + F+ +L I+ LG ++ ++ P Sbjct: 380 LHGIMRVRGFTQDDGHIF--CAEDQIEAETAKFIEFLSGIYKDLGFENFSVKFSDRPEKR 437 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD---DIISLNSIVEQWTAPYAATSD 261 S E A+ P E + + + ++I W Sbjct: 438 SGSDEVWDKAEAALLSATRKAGIEPTLNPGEGAFYGPKLEFVLTDAIGRDWQCGTHQVDF 497 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIG 320 V LPE + AT+ G+DG H V + +G Sbjct: 498 V--------LPER-----------------------LDATYIGSDGAKHRPVMLHRATLG 526 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 + ++ H GK W +AP ++ + +I + D ++ A L G Sbjct: 527 SFERFIGILIEEHAGKLPFW---LAPRQVVVASITSE---ADDYVHEVVATLKAQGVRAE 580 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + + P+ + VG++ V + V ++ Sbjct: 581 ADIRNEKINYKVREHSVGKVPVILAVGAREVEEKTVSVR 619 >gi|50543472|ref|XP_499902.1| YALI0A09427p [Yarrowia lipolytica] gi|49645767|emb|CAG83829.1| YALI0A09427p [Yarrowia lipolytica] Length = 461 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 84/434 (19%), Positives = 170/434 (39%), Gaps = 68/434 (15%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I S G +LP GQ+ + +R + G E+S P + LW +SG ++ + Sbjct: 59 ISPESPGSAFFLPHGQRIYSRLGEFMRLQLRVFGFQEISSPIMYKNSLWKQSGHWEKFQD 118 Query: 92 EMLRLADRNDKAMI-----YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 +M R+ +++ + P + +F S +SYR LP + R+E Sbjct: 119 DMFRVQPGHEETSVEEEFSLKPMNCPGHCLLFNSLKRSYRELPLRYSDFSPLHRNEASGA 178 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 G+ R R F D + F TPE + ++ + ++ GL + Sbjct: 179 LSGLTRVRRFHQDDGHIF-CTPEQVESEISRALKLVQQTYNTFGL--------------E 223 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY------AAT 259 +S +VL+ ET + + + D +E +L S+++ W+ A Sbjct: 224 ISR--VVLSTRPETFIGDIEQWND----AEK-------ALTSVLDSWSVSKGKWELNAGD 270 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHI-FYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 + K+ D L ++K + F ++ L F ++ V + Sbjct: 271 GAFYGPKI-DILVKDKHGKEHQTATTQLDFQLPERFQLKY---FDASETAQRPVMVHRAV 326 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG-- 376 G++ A++ ++GK WP ++P + ++ + + + EK+ A+LS + Sbjct: 327 YGSLERFLAILIDHYEGK---WPLWLSPRQCMVLPV---GEAQNEFAEKVAAQLSGLPSI 380 Query: 377 -------------CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 CDV D E +G + A G+ ++G K + + KV ++ Sbjct: 381 TDQSTPLSASTLFCDV--DTRSETLGQKIKQARNEGYSYIAVIGDKEMQEGKVTVQKPGK 438 Query: 424 GIREDMSLEEVINY 437 R+ ++++E ++ Sbjct: 439 KDRQLLTVDEARDF 452 >gi|14601997|ref|NP_148542.1| prolyl-tRNA synthetase [Aeropyrum pernix K1] gi|74581728|sp|Q9Y9G0|SYP_AERPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|5106029|dbj|BAA81340.1| prolyl-tRNA synthetase [Aeropyrum pernix K1] Length = 485 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 6/163 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + + G ++ + D + + SYG+ + RVVA++I D +G+ Sbjct: 224 GRALQIGTVHHLGQSFTRAFDFRIQMRDERLDHPWQTSYGV-SDRVVASLIAVHGDDRGL 282 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDAC----EKIYARLSKVGCDVFWDDM-GEQIGSQFA 393 + P SVAP ++ +I I D+ R K L K G V DD E+ G++F Sbjct: 283 VIPPSVAPIQVVVIPITPGDEEKRGKVLTYTAKAAEALEKAGLRVHVDDREWERPGAKFY 342 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + G P++V +G + + I R T + ++ L E N Sbjct: 343 YWEAKGVPIRVEIGLREAEQDTLTIARRDTLEKTEVPLGEAGN 385 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 28/169 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL----------------W 80 KG+ W+P G + V ++R + TG E+ P L L W Sbjct: 36 KGMGVWMPYGFQIRRRVLEVVRGLLDSTGHEEVLFPLLIPEHLLRRESEHIRGFEGEVYW 95 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 V G G+E L D + PT E +T + IKSYR LP +YQ+ FR Sbjct: 96 VTHG-----GREEL------DVKLALRPTSETSITYMETFWIKSYRQLPKKYYQVVSIFR 144 Query: 141 DELRPRFGVMRSREF-LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 E + ++R RE K+A++ + E ++ + Y IF RL Sbjct: 145 YETKATRPMIRLREVTTFKEAHTVHESFEDAERQVLEAIEVYKAIFDRL 193 >gi|296877087|ref|ZP_06901128.1| serine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] gi|296431948|gb|EFH17754.1| serine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] Length = 446 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 175 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVIPPYMV 220 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 221 NHDSMFGTGQYPKFKEDTFELSDTN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 277 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM V+ I +L L Sbjct: 278 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPEESYDELEKMVVNAENILQKLNL- 335 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 336 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 366 >gi|289620774|emb|CBI52508.1| unnamed protein product [Sordaria macrospora] Length = 792 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 17/165 (10%) Query: 15 PRDAEIASHKLMLRTGMIHQH---------------SKGIYSWLPLGQKALDNVNAIIRE 59 P ++A+HK L H S G WLP G + + + I+E Sbjct: 302 PDKKQMAAHKKFLEEAAKRDHRLIGKQQELFYFEECSPGSAMWLPHGMRINNAIMEYIKE 361 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E + G E+ P + + LW +SG Y +M L D + + P + +FR Sbjct: 362 EYWKRGYDEVMTPNMFNTSLWEQSGHLAHYKDDMFIL-DVDKEQFGLKPMNCPAHAMMFR 420 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 +S++ LP + R+E G+ R R F DA+ F Sbjct: 421 HRDRSHKELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIF 465 >gi|194384006|dbj|BAG59361.1| unnamed protein product [Homo sapiens] Length = 602 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 213 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 272 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 273 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 331 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 332 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 387 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 388 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 424 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 425 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 473 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 474 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 527 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 528 DIDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 584 >gi|70607029|ref|YP_255899.1| threonyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] gi|68567677|gb|AAY80606.1| threonine-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] Length = 552 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P GQ + + E + G E+ + + LW SG YD Y +ML Sbjct: 165 GVVLFHPNGQIIRKEMMRFMEEINDSMGYKEVYTSHVYRSLLWKISGHYDYYKDKMLLFE 224 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFL 156 ND+ + P + I++S ++SY++LP F + +R E + +G++R R F Sbjct: 225 IDNDEELGIKPMNCPAHILIYKSKVRSYKDLPIRFSEFGHVYRWEKKGELYGLLRVRGFT 284 Query: 157 MKDAYSF 163 D + F Sbjct: 285 QDDGHIF 291 >gi|76363445|sp|Q4J9C4|SYT_SULAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 549 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P GQ + + E + G E+ + + LW SG YD Y +ML Sbjct: 162 GVVLFHPNGQIIRKEMMRFMEEINDSMGYKEVYTSHVYRSLLWKISGHYDYYKDKMLLFE 221 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFL 156 ND+ + P + I++S ++SY++LP F + +R E + +G++R R F Sbjct: 222 IDNDEELGIKPMNCPAHILIYKSKVRSYKDLPIRFSEFGHVYRWEKKGELYGLLRVRGFT 281 Query: 157 MKDAYSF 163 D + F Sbjct: 282 QDDGHIF 288 >gi|313885480|ref|ZP_07819230.1| proline--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] gi|312619210|gb|EFR30649.1| proline--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] Length = 479 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 31/160 (19%), Positives = 75/160 (46%), Gaps = 3/160 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GTK++ + ++ + + S+G+ + R++ ++I D +G+ Sbjct: 215 GKAVQAGTSHYLGTKFAEAFDIKYLNSNNEHVHAFTTSWGV-STRLIGSLIMVHSDDQGL 273 Query: 339 IWPDSVAPFKISLINIKAHDQ--VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + P +AP ++ I + + + + L G DD + G +F + Sbjct: 274 VLPPKIAPQQVVFIPVGPWQKNPAIMEQINEWNQALQAKGVRTIIDDSDNRPGFKFNEWE 333 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 L G PL++ VG + + + + +K R +E ++ ++V++ Sbjct: 334 LRGAPLRIEVGPRDLENKQAILKARDLSEKETVAADQVVD 373 >gi|291277001|ref|YP_003516773.1| threonyl-tRNA synthetase [Helicobacter mustelae 12198] gi|290964195|emb|CBG40041.1| threonyl-tRNA synthetase [Helicobacter mustelae 12198] Length = 603 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM-LRL 96 G+ WLP G + + ++ + + P L + +W SG +D+YG+ M Sbjct: 229 GLPIWLPNGARLRRRIEELLTKALMIRDYEPVRGPELLKSSVWKTSGHFDNYGENMYFTT 288 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D + + P + +++S ++SYR LP FY+ + R E G++R REF Sbjct: 289 IDEVEYGL--KPMNCVGHIKVYQSSVRSYRELPLRFYEYGIVHRHEKSGVLHGLLRVREF 346 Query: 156 LMKDAYSF 163 DA+ F Sbjct: 347 TQDDAHIF 354 >gi|269791928|ref|YP_003316832.1| prolyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099563|gb|ACZ18550.1| prolyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 478 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 15/177 (8%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ F+ DG+ Y S+G+ + R++ A+I + D G+I Sbjct: 220 KALQAGTSHFLGQNFAKAFDIRFQDRDGEVKYAWTTSWGV-STRLIGAIIMTHSDDDGLI 278 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLS-----KVGCDVFWDDMGEQI--GSQF 392 P VAP K++L+ I + + E L ++G D + +F Sbjct: 279 LPPRVAPVKVALLPISTDQDLISSSLEPKAMELKAAIEDRIGPRTVALDRQYHLRPSDRF 338 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE-------EVINYASHRF 442 G PL++ +G K + + V + R G R D+ +E EV+N R Sbjct: 339 FSHLQKGVPLRIELGQKELENRTVRLVCRDNGERIDVPMEGAPERVAEVLNQIQARL 395 Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 1/89 (1%) Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFL 156 D ++ ++ PT E V+ ++ ++S+R+LP Q R E RPR +R+ EFL Sbjct: 97 GDELEEPLVVRPTSETVIGHMYSKWVQSWRDLPILINQWCNVMRWEKRPRL-FLRTSEFL 155 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 ++ ++ T E + +M Y I Sbjct: 156 WQEGHTAHATREEAMEETLRMLGVYETIM 184 >gi|284173635|ref|ZP_06387604.1| threonyl-tRNA synthetase [Sulfolobus solfataricus 98/2] gi|261600981|gb|ACX90584.1| threonyl-tRNA synthetase [Sulfolobus solfataricus 98/2] Length = 545 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 11/181 (6%) Query: 18 AEIASHKLM---LRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 AE H+L+ L H+ + G+ + P GQ + + +RE + G E+ Sbjct: 135 AEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTLRNELITFMREINDSMGYQEVYTSH 194 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFT 131 + D+W SG Y Y +++ D+ YG P + I++S ++YR+LP Sbjct: 195 VLKTDIWKISGHYTLYRDKLIVFNMEGDE---YGVKPMNCPAHILIYKSKPRTYRDLPIR 251 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F + +R E + +G++R R F+ D + F L + K + + ++H+ G Sbjct: 252 FSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIF-LKEDQLKEEIKMLISKTVEVWHKFGF 310 Query: 191 K 191 K Sbjct: 311 K 311 >gi|320539025|ref|ZP_08038700.1| threonyl-tRNA synthetase [Serratia symbiotica str. Tucson] gi|320030958|gb|EFW12962.1| threonyl-tRNA synthetase [Serratia symbiotica str. Tucson] Length = 642 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y Sbjct: 256 MQEEAPGMVFWHNDGWTVFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E + N ++ G I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRAEVNACIRMVYDVYATFGFDKIAVKLSTRPEKRIGTD 431 >gi|330861018|emb|CBX71290.1| threonyl-tRNA synthetase [Yersinia enterocolitica W22703] Length = 457 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +++Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E + N ++ G + I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSD 431 >gi|148887019|sp|Q0SAY4|SYP2_RHOSR RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA ligase 2; Short=ProRS 2 Length = 479 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 31/146 (21%), Positives = 69/146 (47%), Gaps = 3/146 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y G K++ F G++ S+G+ + R++ ++ + D KG+ Sbjct: 222 GRALQSGTSHYMGIKFASAFDIRFTSETGREELCHTTSWGM-STRMIGGIVMTHGDDKGL 280 Query: 339 IWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVAD 396 ++P +AP ++ ++ I + + A +++ RL VG D G ++ + Sbjct: 281 VFPPRLAPHQVVIVPITRGGNVAVEGAADELAHRLRSVGVRTHVDARPHLTPGFKYNEWE 340 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRL 422 + G P+++ +G + + D V + RL Sbjct: 341 MRGVPVRLELGPRDLEDGTVMMVKRL 366 Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ ++ I S+R+LP Q R ELRPR +R+ EFL ++ Sbjct: 104 EEPLVVRPTSETIIGEMMAKWISSHRDLPLLLNQWANVVRWELRPRM-FLRTTEFLWQEG 162 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLG--LKSIPM 195 ++ + + S + + L I+H + L +IP+ Sbjct: 163 HTAHV----DEASARRETMLALDIYHEVARELAAIPV 195 >gi|218288925|ref|ZP_03493176.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218241014|gb|EED08191.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 648 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 84/404 (20%), Positives = 167/404 (41%), Gaps = 37/404 (9%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ WLP G K + I + + G + P L + +L+ SG ++ Y +M Sbjct: 262 GQGLPLWLPNGAKIRRIIERYIVDLEESLGYQHVYTPHLANVELYKISGHWEHYKDDMYP 321 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +++ ++ P + +++ + SYR LP ++ R E+ G+ R R Sbjct: 322 PMKIDNEELVLRPMNCPHHMMVYKHRLHSYRELPIRIAELGTMHRYEMSGALAGLQRVRA 381 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 + DA+ F P+ + + + R++ G+ R LS+ Sbjct: 382 MTLNDAHIF-CRPDQIEQEFTGVVRLIQRVYKDFGIDDYYHR---------LSYR----- 426 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI-VEQWTAPYAATSDVHNEKLFDSLPE 273 D T+ + D M S + L + E A Y DV ++ +L + Sbjct: 427 DPKNTEKYVQNDEMWELAQSTLRKVMLDLGLEFVEAEGEAAFYGPKLDV---QVRTALGK 483 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAM-RVVAAVIES 331 ++ +S ++ F+ +++L + G DG+ H + G +G M R VA +IE Sbjct: 484 DETLSTIQLD----FHLPNRFNL----EYVGEDGERHRPVVIHRGVVGTMERFVAFLIEQ 535 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 KG +P +AP ++ + ++ D+ A E++ A+L ++G D +IG + Sbjct: 536 Y---KG-AFPTWLAPTQVVVASVA--DEFAGYA-EEVAAKLRELGIRAEADVSDNKIGYK 588 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 A P ++VG++ + V ++ G M L++ + Sbjct: 589 IRQAQTHKIPYTLVVGAREREEGTVSVRKYHAGDLGVMPLDQFV 632 >gi|220903768|ref|YP_002479080.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254783519|sp|B8J4E4|SYT_DESDA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219868067|gb|ACL48402.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 647 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 85/392 (21%), Positives = 153/392 (39%), Gaps = 47/392 (11%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ WLP G + R+E + G + P L + W +SG YD Y +E + Sbjct: 262 APGMVFWLPKGMLVRTILEDFWRKEHLKRGYDIVQGPQLLRVETWQKSGHYDHY-RENMY 320 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + A P + I+ + + SYR+LP ++++ + R E G++R R+ Sbjct: 321 FTQIEEDAYGVKPMNCISHMLIYGNELHSYRDLPQRYFELGVVHRHEKSGVLHGLLRVRQ 380 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFI 211 F DA+ PE + ++ + + G + ++ R ES IG D + E Sbjct: 381 FTQDDAHII-CAPEQLEGEILEVIHLIRDLMNLFGFEYKVAVSTRPESS-IGTDEAWE-- 436 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +A + Q K + + I + F Y DV +L D + Sbjct: 437 -MATSALVQA-VEKAGLPYTINEGDGAF----------------YGPKIDV---RLLDCI 475 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIE 330 + S ++ F ++ L T+ G DG+ H M I G++ ++ Sbjct: 476 GREWQCSTIQVD----FTLPERFDL----TYVGQDGERHRPVMVHRAIMGSLERFIGILV 527 Query: 331 SSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + G W +AP + L+ + +A D+ E+ A +G D E++G Sbjct: 528 ENFAGALPTW---LAPEQARLLTVTEAGDEAVSSMLEEFKA----LGIRAQADTRNEKLG 580 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + A L P ++VG K V ++ R Sbjct: 581 FKVREAQLAKVPYILVVGEKEVQAGGANVRLR 612 >gi|126321714|ref|XP_001373481.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 723 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 80/415 (19%), Positives = 160/415 (38%), Gaps = 57/415 (13%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G ++P G + + IR E + G E+ P + ++ LW+ SG + Y + Sbjct: 336 HELSPGSCFFMPKGAYIYNTLVEFIRNEYRKRGFQEVVTPNIYNSKLWLTSGHWQHYSEN 395 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + +F +S+R LP + R+EL G+ R Sbjct: 396 MFSF-EVEKEIFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTR 454 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSHE 209 R F DA+ F + + N + +LR + + S + + P GD+ Sbjct: 455 VRRFQQDDAHIFCTMEQIEEEIKN--CLDFLRTVYNVFGFSFKLNLSTRPEKFLGDVE-- 510 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDVH 263 + + E Q+ SLN E+W A Y D+ Sbjct: 511 ---IWNQAEKQLES--------------------SLNEFGEKWELNPGDGAFYGPKIDI- 546 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGA 321 ++ D++ + + ++ F +++L T+ DG D V + +G+ Sbjct: 547 --QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIIHRAILGS 596 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + + A++ ++ GK WP ++P ++ ++ + C + +K+ + Sbjct: 597 VERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVQQQFHNANLMTDS 650 Query: 382 D-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + ++VG K + V I+ R + + ++ E I Sbjct: 651 DLDPGCTLNKKIRNAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTVSETI 705 >gi|160881955|ref|YP_001560923.1| prolyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|259511590|sp|A9KL35|SYP_CLOPH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160430621|gb|ABX44184.1| prolyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 477 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/156 (21%), Positives = 74/156 (47%), Gaps = 3/156 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G FG ++ + + + K YV S+G+ R++ A+I D G+ Sbjct: 225 GKALQSGTSHNFGDGFAKAFNIQYTDKENKLQYVHQTSWGM-TTRLIGALIMVHGDNSGL 283 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP ++ ++ I + + ++ +L V DD + G +F+ ++ Sbjct: 284 VLPPRIAPTQVVIVPIMQKKEGVLEKAAELREKLGAFRVKV--DDSDKSPGWKFSEHEMR 341 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P++V +G K + ++ + R T + +SL+E+ Sbjct: 342 GIPVRVEIGPKDIEANQAVLVRRDTREKTVVSLDEI 377 >gi|19074578|ref|NP_586084.1| THREONYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1] gi|74697534|sp|Q8SRH2|SYTC_ENCCU RecName: Full=Probable threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|19069220|emb|CAD25688.1| THREONYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1] Length = 640 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 85/389 (21%), Positives = 152/389 (39%), Gaps = 47/389 (12%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 ++S G +LP G + + +REE + G E+ P + LW ESG +Y + M Sbjct: 256 KYSPGSCFFLPNGTTMYNTLIEFLREEYRKRGFKEVITPNIFCTQLWEESGHLQNYKENM 315 Query: 94 LRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + D + P H +FR S+R+LP + R+EL G+ R Sbjct: 316 FIIEGDTFALKPMNCPGH----CVMFRHQDHSFRDLPLRLADFGVLHRNELSGTLTGLTR 371 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F T + K K + +L + G F Sbjct: 372 VRRFQQDDAHIF-CTKDQVKEEI-KGCLEFLSFVY-----------------GVFGFRFE 412 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 ++ T + S D D + D+ I A Y D+ L D+L Sbjct: 413 LVLSTRPEKYLGSVDEWDRAEKALADAMDESNMPFKINAGDGAFYGPKIDI---TLHDAL 469 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIE 330 +R+ I++ F ++ L ++ +DG+ + I G++ + A+I Sbjct: 470 --GRRIQCATIQLD--FQLPQRFEL----KYRDSDGQCRTPVIIHRAILGSIERMIAIIL 521 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 S + W ++P +I+++N+ D V K+ + L++ DV D G + Sbjct: 522 ESFGKRLPFW---ISPRQIAIVNMGNPDYV-----GKVRSVLARFRLDVI--DDGNTLSK 571 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + A+ G+ L +VG K +++ I+ Sbjct: 572 RIRTAETSGYALVCVVGKKEAEANEINIR 600 >gi|320547963|ref|ZP_08042245.1| serine--tRNA ligase [Streptococcus equinus ATCC 9812] gi|320447387|gb|EFW88148.1| serine--tRNA ligase [Streptococcus equinus ATCC 9812] Length = 425 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGSRFLFYKGLGARLERAIYNFM------LD--------EHAKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD +D +I PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELAD-SDYVLI--PTAEVPLTNYYRGEILDGKELPVYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM V+ I +LGL Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPETSYDELEKMVVNAENILQKLGL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|295111084|emb|CBL27834.1| prolyl-tRNA synthetase [Synergistetes bacterium SGP1] Length = 479 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 24/172 (13%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A+ ++ G + G ++ F+ DG+ S+GI + R++ A+I + D G+ Sbjct: 219 AKALQAGTSHFLGQNFARAFEIRFQDRDGELATCWTTSWGI-STRLIGAIIMTHSDDDGL 277 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P +AP K+ L+ I ++ + LS + E +G + D Sbjct: 278 VLPPHIAPVKVVLLPISKDERQAEGVLLPMARELS--------GQLDEALGGLYTAVDTQ 329 Query: 399 ---------------GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G PL++ +G K V V + R TG + D+S + ++ Sbjct: 330 FHMRPGDRFFTHLQRGVPLRLELGEKDVQSGTVRVVRRDTGEKADLSRDALV 381 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 6/155 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 +G P G +NV + RTG + P L ++ L E+ + + E Sbjct: 32 RGCMVIRPTGYSIWENVQRYFDDAFKRTGHVNAYFPLLIPNSFLQKEAEHVEGFAPECAM 91 Query: 96 L----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + + ++ PT E V+ ++ I+S+R+LP Q R E RPR +R Sbjct: 92 VTHAGGEELEEPFAVRPTSETVIGHMYSRWIQSWRDLPVLINQWCNVMRWEKRPRL-FLR 150 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 + EFL ++ ++ T + ++ +M Y ++ Sbjct: 151 TSEFLWQEGHTAHATEQEAREETLRMLEVYRKVME 185 >gi|255560023|ref|XP_002521030.1| threonyl-tRNA synthetase, putative [Ricinus communis] gi|223539867|gb|EEF41447.1| threonyl-tRNA synthetase, putative [Ricinus communis] Length = 691 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 HQ S G + +LP G + + + IR + G E+ P + + LW SG +Y Sbjct: 333 FCHQLSPGSWFFLPHGTRIYNKLMDFIRVQYRERGYEEVKSPNIYNMKLWETSGHAANY- 391 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + L + + P + IF+ ++SYR LP + R+E G+ Sbjct: 392 KENMFLLEIEKQEFGLKPMNCPGHCVIFQHRVRSYRELPLRLADFGVLHRNEASGALTGL 451 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 452 TRVRRFQQDDAHIF 465 >gi|300087925|ref|YP_003758447.1| threonyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527658|gb|ADJ26126.1| threonyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 584 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 77/393 (19%), Positives = 150/393 (38%), Gaps = 51/393 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P + V R+ G + P + ++LW SG +Y M Sbjct: 202 GLVIYGPKAGRIRTTVEEFWRKAHYDHGYELLYTPHIGRSNLWETSGHLQNYRDIMYSPM 261 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + + P + ++S ++SYR+LP + ++ +R E G++R R F Sbjct: 262 DIDGQDYYVKPMNCPFHILFYKSQMRSYRDLPLRWAELGTVYRYERSGVLHGLLRVRGFT 321 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ TPE + +++ ++ G + + + P IG DL Sbjct: 322 QDDAHII-CTPEQIETEIDEVLRFSFEMWRTFGFTDLKLFLATRPEKAIGTDL------- 373 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 Q + D + + + ++ S+ E A Y D+ K+ D L Sbjct: 374 ------QWQQASDALRRVMDARGLEY-------SLDEGGGAFYGPKIDI---KVRDVLGR 417 Query: 274 NKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIE 330 +++ + ++LP + G DG++H M +G+ ++ Sbjct: 418 EWQMTTIQFD----------FNLPERFDMVYTGQDGQEHRPYMVHRALLGSWERFFGLLI 467 Query: 331 SSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + G +W P+ VA I+ ++ + ++I A+L K G V DD E + Sbjct: 468 EHYGGAFPVWLHPEQVAVLPIADRHL--------EYAQEITAKLKKAGVRVALDDRSETV 519 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + A L P V++G K + + ++ R Sbjct: 520 NMKIRQAQLDKIPYIVVIGDKELEKGTLAVRLR 552 >gi|259047194|ref|ZP_05737595.1| threonine--tRNA ligase [Granulicatella adiacens ATCC 49175] gi|259036244|gb|EEW37499.1| threonine--tRNA ligase [Granulicatella adiacens ATCC 49175] Length = 647 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 10/152 (6%) Query: 301 TFKGADGKD-HYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ G DG + H + G+ A R VA +IE KG +P +AP + ++I + Sbjct: 500 TYVGEDGDNTHRPVVIHRGVVSTAERFVAYLIEEY---KGA-FPTWLAPVQATIIPVSVE 555 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 DA ++ +++++G V DD E++G + + P Q+++G K V + V Sbjct: 556 HHY--DAARELKEKMARLGMRVELDDRNEKMGYKIRASQTQKIPYQLVIGDKEVEEGTVT 613 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSN-NRPV 448 ++ + + MS+E + Y +N +RP+ Sbjct: 614 VRRYGSKETKSMSIEAYLEYVQREIANFSRPL 645 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 4/151 (2%) Query: 31 MIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q G+ WLP G + I +++ G + P + L+ SG + Y Sbjct: 252 MISQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPVMADVGLYKTSGHWAHY 311 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 ++M D D + ++ P + ++++HI SYR LP ++ + R E Sbjct: 312 QEDMFPPMDMGDGELLVLRPMNCPHHMMVYKNHIHSYRELPIRIAELGMMHRYEKSGALS 371 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 G+ R RE + D ++F + P+ K + ++ Sbjct: 372 GLQRVREMTLNDGHTF-VRPDQIKDEFKRIL 401 >gi|270308068|ref|YP_003330126.1| threonyl-tRNA synthetase (thrS) [Dehalococcoides sp. VS] gi|270153960|gb|ACZ61798.1| threonyl-tRNA synthetase (thrS) [Dehalococcoides sp. VS] Length = 582 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 86/405 (21%), Positives = 151/405 (37%), Gaps = 60/405 (14%) Query: 32 IHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +HQ G+ +WLP G + ++E + G + P + DLW SG + Y Sbjct: 198 LHQEIGGGLVNWLPNGATIRHLIEEFWKKEHLKRGYNLVYTPHIAKVDLWKTSGHWGFYR 257 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM 150 + M D + + + P + +F++ +SY+ LP ++ +R E R GV+ Sbjct: 258 ENMYSPMDIDGEEYVLKPMNCVYHILMFKNRTRSYKELPIRMAELGTVYRYE---RSGVL 314 Query: 151 ----RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IG 203 R R F DA+ F L + K + ++ I G + + P +G Sbjct: 315 HGLSRVRGFTQDDAHIFCLYEQLEKEVVKVLDLAKFMI-DTFGFAKYKVMLSTRPEKYVG 373 Query: 204 GDLSHEFI--VLADTGETQVFCSKDFMDFPIPSENTDFD---DIISLNSIVEQWTAPYAA 258 E+ +LA E + +D P E + DI +++ W P Sbjct: 374 ELAKWEYATDILAKALEANGISYQ--VD---PGEGVFYGPKIDIKFEDALGRAWQGP--- 425 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 T V + LPE VS G DGKD V M Sbjct: 426 TIQVDFQ-----LPERFEVSVVG-----------------------EDGKDQPVAMVHRT 457 Query: 319 I-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 + G+M + + + G +W ++P ++ +I I + EK+ L + Sbjct: 458 VLGSMERFMSCLTEQYGGAFPVW---LSPKQVMIIPIADRHS---EFAEKLACELREEEV 511 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 V D+ E + + A L P ++VG K + + ++ R+ Sbjct: 512 RVEVDNRSETMNQKIRQAQLAKIPYMLVVGDKEIETGSIALRSRI 556 >gi|332558829|ref|ZP_08413151.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] gi|332276541|gb|EGJ21856.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] Length = 646 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 12/184 (6%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + + +R + G E+ P + LW SG +++Y + Sbjct: 260 LQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQVVDRKLWEASGHWEAYKE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + + A P + ++ +KSYR+LP + R E Sbjct: 320 NMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRYESSGS 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP--- 201 G+MR R F+ DA+ F E S F+ L ++ LG S ++ + P Sbjct: 380 MHGLMRVRGFVQDDAHIF--CTEDQIESECAAFIELLSSVYKDLGFDSFEIKLSTRPEVR 437 Query: 202 IGGD 205 IG D Sbjct: 438 IGSD 441 >gi|302774721|ref|XP_002970777.1| hypothetical protein SELMODRAFT_94171 [Selaginella moellendorffii] gi|300161488|gb|EFJ28103.1| hypothetical protein SELMODRAFT_94171 [Selaginella moellendorffii] Length = 528 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 5/146 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R ++ G G ++ F +G ++ S+G+ + R+V +I + D KG++ Sbjct: 267 RALQAGTSHNLGQNFARAFETQFTDVNGDLQHIWQTSWGM-STRMVGGIIMTHGDDKGLM 325 Query: 340 WPDSVAPFKISLINI--KAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVA 395 P +AP ++ ++ I K +Q A K+ + + G V D ++ G +F Sbjct: 326 LPPKLAPIQVVIVPIWKKGDEQEAVLQAAHKVESLVRAAGIRVKLDTFDQRTPGWKFNHW 385 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHR 421 +L G P+++ +G K V+++ V + R Sbjct: 386 ELKGVPIRIEIGPKDVANNSVVVARR 411 >gi|261752375|ref|ZP_05996084.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|261742128|gb|EEY30054.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513] Length = 660 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K + + +R + Sbjct: 237 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQKLVSYMRRRLDS 292 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 293 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 352 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 353 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLRI 411 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 412 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 442 >gi|71908290|ref|YP_285877.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Dechloromonas aromatica RCB] gi|123733181|sp|Q47CM4|SYT_DECAR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71847911|gb|AAZ47407.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Dechloromonas aromatica RCB] Length = 638 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G+ W P G + +R G E+ P + LW +SG ++ Y Sbjct: 255 MQDEAPGLVFWHPKGWAIWQEIEGYMRAVYRNNGYQEVRCPQILDKSLWEKSGHWEHYKD 314 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + P + +F + ++SYR LP + + R+E G+M Sbjct: 315 NMFTTSSENRDYAV-KPMNCPGHVQVFNAGLRSYRELPLRYGEFGSCHRNEPAGALHGLM 373 Query: 151 RSREFLMKDAYSF 163 R R F+ D + F Sbjct: 374 RVRGFVQDDGHIF 386 >gi|227872945|ref|ZP_03991245.1| proline--tRNA ligase [Oribacterium sinus F0268] gi|227841197|gb|EEJ51527.1| proline--tRNA ligase [Oribacterium sinus F0268] Length = 478 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 1/147 (0%) Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 FG ++ + + V S+GI R + A+I D G++ P +AP ++ Sbjct: 235 FGDGFAKAFQVQYLSKNNTVEPVHQTSWGI-TTRTIGALIMVHGDDSGLVLPPRIAPVQV 293 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 ++I I+ + + D + L G V DD + G +FA +++ G PL++ +G K Sbjct: 294 NIIPIQQNKEGVLDKAFDLMNTLMDAGLRVKVDDSDKTPGFKFADSEVRGIPLRLEIGPK 353 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVIN 436 + +V + R T + +S E ++ Sbjct: 354 DIEAGQVVLVRRDTREKIVVSFENLVE 380 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 10/157 (6%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG P G +N+ A + TG S+P L L ES + + E+ Sbjct: 37 KGFMVIRPAGYAIWENIMAALDSRFKATGVQNCSMPLLIPQSLLEKESEHVEGFAPEVAW 96 Query: 96 L----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + + R ++ + PT E + D + +KSYR+LP Q +++ RP Sbjct: 97 VTSGGSKRLEERLCVRPTSEVLFCDYYSKVVKSYRDLPQLLNQWCSVVRWEKTTRP---F 153 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 +R+REFL ++ ++ T E ++ M Y + Sbjct: 154 LRTREFLWQEGHTVHATAEEAEERTLLMLDIYADVLE 190 >gi|111020488|ref|YP_703460.1| prolyl-tRNA synthetase [Rhodococcus jostii RHA1] gi|110820018|gb|ABG95302.1| proline--tRNA ligase [Rhodococcus jostii RHA1] Length = 530 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 31/146 (21%), Positives = 69/146 (47%), Gaps = 3/146 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y G K++ F G++ S+G+ + R++ ++ + D KG+ Sbjct: 273 GRALQSGTSHYMGIKFASAFDIRFTSETGREELCHTTSWGM-STRMIGGIVMTHGDDKGL 331 Query: 339 IWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVAD 396 ++P +AP ++ ++ I + + A +++ RL VG D G ++ + Sbjct: 332 VFPPRLAPHQVVIVPITRGGNVAVEGAADELAHRLRSVGVRTHVDARPHLTPGFKYNEWE 391 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRL 422 + G P+++ +G + + D V + RL Sbjct: 392 MRGVPVRLELGPRDLEDGTVMMVKRL 417 Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ ++ I S+R+LP Q R ELRPR +R+ EFL ++ Sbjct: 155 EEPLVVRPTSETIIGEMMAKWISSHRDLPLLLNQWANVVRWELRPRM-FLRTTEFLWQEG 213 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLG--LKSIPM 195 ++ + + S + + L I+H + L +IP+ Sbjct: 214 HTAHV----DEASARRETMLALDIYHEVARELAAIPV 246 >gi|269468318|gb|EEZ79994.1| threonyl-tRNA synthetase [uncultured SUP05 cluster bacterium] Length = 369 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 73/180 (40%), Gaps = 14/180 (7%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H KG L Q + ++ R+ + E+ P L LW +SG +D + Sbjct: 64 GMVFWHEKG----WTLYQIVEQYMRSVFRDNDYK----EVHTPQLIDKSLWEKSGHWDKF 115 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 G M + N + P + I+ +KSYR+LP + R+E G Sbjct: 116 GDAMFTTSSENRDYAV-KPMNCPAHIQIYNQGLKSYRDLPLRLAEFGSCHRNEPSGTLHG 174 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 +MR R F+ D + F T + + ++ G +++ ++ + P +G D Sbjct: 175 IMRVRNFVQDDGHIF-CTENQIQDEVSTFIDLTFDVYKNFGFENVDIKLSTRPENRVGSD 233 >gi|254701818|ref|ZP_05163646.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513] Length = 658 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 17/211 (8%) Query: 7 FLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E AE H+ + R + H + G+ W G K + + +R + Sbjct: 235 YLHMLEE----AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQKLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F T E ++ Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIF-CTEEQMAAECLRI 409 Query: 178 FVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 L ++ G + I ++ + P +G D Sbjct: 410 NDLILSVYKDFGFEEITIKLSTRPEKRVGSD 440 >gi|229823243|ref|ZP_04449312.1| hypothetical protein GCWU000282_00541 [Catonella morbi ATCC 51271] gi|229787409|gb|EEP23523.1| hypothetical protein GCWU000282_00541 [Catonella morbi ATCC 51271] Length = 647 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 3/161 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + I +++ G + P + DL+ SG + Y +M Sbjct: 262 GLPFWLPKGATIRRVIERYIMDKEISLGYDHVYTPIMAKVDLYQTSGHWAHYKDDMFPPM 321 Query: 98 DRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D D M + P + I+++ I SYR LP ++ + R E G+ R RE Sbjct: 322 DMGDGEMLVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREM 381 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 + DA+ F + P+ K + ++ ++H G+ R Sbjct: 382 TLNDAHIF-VRPDQIKEEFIRVLDLIKAVYHDFGITDYRFR 421 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 13/150 (8%) Query: 301 TFKGADGKDHY--VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISL--INIK 355 T+ G DG+D++ V + + M R VA +IE KG +P +AP +++L ++++ Sbjct: 502 TYVGEDGQDNHRPVVIHRGVVSTMERFVAYLIEEY---KGA-FPTWLAPVQVALLPVSLE 557 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 AH D ++IY L G V D E++G + A P Q+++G + VS+ Sbjct: 558 AHS----DRVQEIYEDLKAKGFRVDMDLRNEKLGYKIRSAQTAKIPYQIVIGDQEVSEGT 613 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V ++H + E S ++ + S +N Sbjct: 614 VNVRHYGSAKSESYSYDDFVRLLSEDVANK 643 >gi|169244471|gb|ACA50509.1| aminoacyl-tRNA synthase [Oryza sativa Japonica Group] Length = 510 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 5/162 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RG++ G ++ TF+ G V S+ R + ++ + D KG Sbjct: 245 TGRGVQGATSHCLGQNFAKMFDITFENDKGSRSMVWQNSWAY-TTRSIGVMVMTHGDDKG 303 Query: 338 IIWPDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFA 393 ++ P VAP ++ +I + D + C+K L K G D G +++ Sbjct: 304 LVLPPRVAPLQVIVIPVPYKDVDTTAIVNECKKTVETLEKAGIRADLDTRANYSPGWKYS 363 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++ G PL++ +G K +++++ + R G + D+ +++ Sbjct: 364 HWEMKGVPLRIEIGPKDMANNQARVVRRDNGAKADIPTADLV 405 Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 37/81 (45%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM F I+S+R+LP Q R E +RSREFL ++ ++ T Sbjct: 133 PTSETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATK 192 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 E + ++ Y RI+ Sbjct: 193 EEADEEVLQILELYRRIYEEF 213 >gi|315648100|ref|ZP_07901201.1| prolyl-tRNA synthetase [Paenibacillus vortex V453] gi|315276746|gb|EFU40089.1| prolyl-tRNA synthetase [Paenibacillus vortex V453] Length = 485 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 6/150 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R ++ G Y GT +S + + Y S+G+ + R++ ++I D +G+ Sbjct: 228 GRAVQAGTSHYMGTNFSQAFEIQYLNRENTLEYAHTTSWGV-STRLIGSLIMVHGDDRGL 286 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAV 394 + P VAP ++ +I I K + V ++++ L G V DD + + G +F Sbjct: 287 VLPPKVAPTQVIMIPIGPPKTREAVV-GRTDELFRELKSAGIRVRVDDNPDVRPGWKFNE 345 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ G P+++ +G + + + + R+TG Sbjct: 346 YEMRGVPVRLEIGPRDMENGVCVLVSRITG 375 >gi|158523204|ref|YP_001531074.1| threonyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] gi|238686905|sp|A9A078|SYT_DESOH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|158512030|gb|ABW68997.1| threonyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] Length = 637 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 5/138 (3%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ + G+ + P G K + + R E G +E+ P + LW +SG +++Y + Sbjct: 252 HEEAAGMPFFHPNGMKLWNALLDYWRLEHRAAGYVEVKTPVMLDRALWEKSGHWENYREN 311 Query: 93 M-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + D N A+ P + +++ SYR+LP +I L R EL G+ Sbjct: 312 MYVSVIDDNQYAI--KPMNCPGGMLLYKEKRYSYRDLPLRVAEIGLVHRHELSGVLSGLF 369 Query: 151 RSREFLMKDAYSFDLTPE 168 R R F DA+ F +TP+ Sbjct: 370 RVRAFHQDDAHIF-MTPD 386 >gi|83942907|ref|ZP_00955367.1| threonyl-tRNA synthetase [Sulfitobacter sp. EE-36] gi|83845915|gb|EAP83792.1| threonyl-tRNA synthetase [Sulfitobacter sp. EE-36] Length = 649 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 81/401 (20%), Positives = 139/401 (34%), Gaps = 58/401 (14%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 G + H+ G WL Q + +R +Q G +E++ P + LW SG ++ Y Sbjct: 266 GQVFWHANG---WLIYTQ-----LQDYMRRKQRAGGYVEVNTPQVVDRKLWEASGHWEKY 317 Query: 90 GKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 M + R P + IF +KSYR+LP + R E Sbjct: 318 QDHMFIVEVDEEHAREKSVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPS 377 Query: 145 PRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGPI 202 G+MR R F D + F E + F+ +L I+ LG ++ ++ P Sbjct: 378 GALHGIMRVRGFTQDDGHIF--CAEDQIEAETAKFIEFLSGIYKDLGFENFSVKFSDRPE 435 Query: 203 GGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD---DIISLNSIVEQWTAPYAAT 259 S E A+ P E + + + ++I W Sbjct: 436 KRSGSDEVWDKAEAALLSATRKAGIEPTLNPGEGAFYGPKLEFVLTDAIGRDWQCGTHQV 495 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYG 318 V LPE + AT+ G+DG H V + Sbjct: 496 DFV--------LPER-----------------------LDATYIGSDGAKHRPVMLHRAT 524 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G+ ++ H GK W +AP ++ + +I + D ++ A L G Sbjct: 525 LGSFERFIGILIEEHAGKLPFW---LAPRQVVVASITSE---ADDYVHEVVATLKAQGVR 578 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E+I + + P+ + VG++ V + V ++ Sbjct: 579 ADADIRNEKINYKVREHSVGKVPVILAVGAREVEEKTVSVR 619 >gi|3859700|emb|CAA21975.1| mitochondrial threonyl tRNA synthetase [Candida albicans] Length = 455 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 96/450 (21%), Positives = 176/450 (39%), Gaps = 77/450 (17%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 I+S +L+ T S G +LP G + L+ + ++ +Q + G E+ P + L Sbjct: 36 ISSKQLLYTTDPT---SPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLIFKTKL 92 Query: 80 WVESGRYDSYGKEMLRLADR---------NDKAMIYG--PTHEEVMTDIFRSHIKSYRNL 128 W +SG +D+Y +M ++ N + YG P + IF +SY+ L Sbjct: 93 WKKSGHWDNYKDDMFKVVGNDITKEEYTDNIEEHEYGLKPMNCPSHCMIFAKFDRSYQEL 152 Query: 129 PFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF----------DLTPEGSKHSYNKM 177 P + R+E G+ R R F D + F T E K +YN Sbjct: 153 PVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQIDGEIKNTLELIKDTYNVF 212 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ + + + R E IG I D E+Q+ K+ ++ N Sbjct: 213 GINEIEFY-------LSTRPEDKFIGE------IETWDIAESQL---KNVLNSTAGEGNW 256 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + E A Y DV + F NK+ I++ F ++ L Sbjct: 257 ---------ATREGDGAFYGPKIDVLLKDAF-----NKKHQVGTIQLD--FQLPNRFEL- 299 Query: 298 MSATFKGADGK-DHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI- 354 + G DGK DH + + G++ A++ + GK WP + P + ++ I Sbjct: 300 ---KYVGEDGKRDHQPILVHRAVFGSLERFFAILLDHYQGK---WPFWINPRQALIVPIN 353 Query: 355 KAHDQVCRD----------ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 ++H V + +C+ A L+ V D GE +G++ A G+ + Sbjct: 354 ESHVPVAEELQKKLSGDIVSCDNAIAPLTGFTFHVDIDKRGETVGARTKDAIQKGYSYLI 413 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 ++G K +++ ++ R ++M+ +E+ Sbjct: 414 MIGDKDIANGTFAVRSRDDRKIKNMTSDEI 443 >gi|31544379|ref|NP_852957.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|81572846|sp|Q7NBT5|SYT_MYCGA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|31541223|gb|AAP56525.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|284930421|gb|ADC30360.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)] Length = 573 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 95/430 (22%), Positives = 162/430 (37%), Gaps = 96/430 (22%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP GQ + + Q + G + ++ P L + DL+ +SG Y+ Y K+M L Sbjct: 194 GMPIWLPNGQIVRQLIGDYVHSVQKKFGFMAVNTPILGNVDLYKKSGHYNHYAKDMFPEL 253 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF-RDELRPRF------ 147 L D DK M+ T H Y N P +Y + ++ D L R+ Sbjct: 254 ALLD-GDKMMLRPMTCPH--------HCLVYLNKPRNYYDLPMRLSEDALLHRYEASGGL 304 Query: 148 -GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV------SYLRIFHRLGL---------- 190 G+ R R + D + F + N V ++ FHR+ L Sbjct: 305 TGLERVRAMTLLDNHIFCRLDQIKTEILNAYQVIKEVIGTFNLKFHRIDLSLHDPNDKQS 364 Query: 191 ----KSIPMRAESGPIGG--DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + R+E+ DL E+ GE + K +DF + T + II+ Sbjct: 365 FIDNEQMWARSENQLEDALKDLGLEYT--KQVGEAAFYGPK--IDFQV---KTALNKIIT 417 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 +++I ++ P D+ + E G I + G Sbjct: 418 VSTIQLDFSLPSEEKFDI-----------KYKTKDNTYEQGVIIHLGI------------ 454 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCR 362 +G+Y R VA ++E + G +W +AP + +I N H + C Sbjct: 455 ---------IGTYE----RFVATLLEQTK-GALDLW---LAPKQAVIIPVNNSVHLEGCN 497 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 EK+ AR +V D E++ + + P+Q+I+G + + + I +RL Sbjct: 498 QLLEKLLARDLRVTV----DSRDERLNKKIRDHQVNKIPVQIIIGDNELKNPDL-ITYRL 552 Query: 423 TGIREDMSLE 432 G + LE Sbjct: 553 YGQEDSNQLE 562 >gi|255071699|ref|XP_002499524.1| predicted protein [Micromonas sp. RCC299] gi|226514786|gb|ACO60782.1| predicted protein [Micromonas sp. RCC299] Length = 613 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 75/400 (18%), Positives = 146/400 (36%), Gaps = 38/400 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G D + ++ G + P + DLW SG D Y + M R Sbjct: 236 GLVFWHPKGALMRDMIERFWKDIHLERGYDLLYTPHVGKLDLWKTSGHADFYSENMYRPI 295 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D D+ P + +++ SYR+LP + ++ +R E G+ R R F Sbjct: 296 DVEDETYQLKPMNCPFHVAVYKDGYFSYRDLPIRWAEMGTVYRYERSGTMHGLFRVRGFT 355 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F L P+ + I G K + + P E A+ Sbjct: 356 QDDAHIFCL-PDQIADEIKGVLDLTEDILSTFGFKEFEVNLSTQPEKSVGGPEIWDKAEG 414 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 K + D+ + F Y D+ K+ D++ + Sbjct: 415 ALKDALAQKGW-DYEVDEGGGAF----------------YGPKIDI---KILDAIGRKWQ 454 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 S ++ F ++ L A + K + + G++ ++ ++ G Sbjct: 455 CSTVQLD----FNLPERFDL---AYIDKENVKQRPIMIHRAIFGSLERFFGILTENYAGA 507 Query: 337 GIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 +W +AP ++ L+ + A D ++ K+ R + + CDV E++ A Sbjct: 508 FPLW---IAPTQVRLLPVTDAVDDYVQETARKL--RAAGIRCDV---QSQERLAKLVRNA 559 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + P+ +VG + D + ++ G + +S+++V+ Sbjct: 560 EKAKIPVMCVVGEQEAKDGTLAVRTYADGDQGVLSVDDVV 599 >gi|220926910|ref|YP_002502212.1| threonyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] gi|219951517|gb|ACL61909.1| threonyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] Length = 670 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + G+ W P G + A +R + + E++ P + LW SG +D Y + Sbjct: 257 QEEGPGVVFWHPKGWTLFQELIAYMRR-RLKGDYREVNAPQILDKALWETSGHWDWYREN 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M +++ P + IF+ +KSYR+LP + R E G+MR Sbjct: 316 MFVTKTEDERVFAIKPMNCPGHVQIFKHGLKSYRDLPLRLAEFGAVSRYEPSGALHGLMR 375 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 376 VRAFTQDDAHVF 387 >gi|77463957|ref|YP_353461.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter sphaeroides 2.4.1] gi|123757748|sp|Q3J0X4|SYT_RHOS4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77388375|gb|ABA79560.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter sphaeroides 2.4.1] Length = 646 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 12/184 (6%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + + +R + G E+ P + LW SG +++Y + Sbjct: 260 LQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQVVDRKLWEASGHWEAYKE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + + A P + ++ +KSYR+LP + R E Sbjct: 320 NMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRYESSGS 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP--- 201 G+MR R F+ DA+ F E S F+ L ++ LG S ++ + P Sbjct: 380 MHGLMRVRGFVQDDAHIF--CTEDQIESECAAFIELLSSVYKDLGFDSFEIKLSTRPEVR 437 Query: 202 IGGD 205 IG D Sbjct: 438 IGSD 441 >gi|126462800|ref|YP_001043914.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] gi|166225489|sp|A3PLC6|SYT_RHOS1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|126104464|gb|ABN77142.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] Length = 646 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 12/184 (6%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + + +R + G E+ P + LW SG +++Y + Sbjct: 260 LQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQVVDRKLWEASGHWEAYKE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + + A P + ++ +KSYR+LP + R E Sbjct: 320 NMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRYESSGS 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP--- 201 G+MR R F+ DA+ F E S F+ L ++ LG S ++ + P Sbjct: 380 MHGLMRVRGFVQDDAHIF--CTEDQIESECAAFIELLSSVYKDLGFDSFEIKLSTRPEVR 437 Query: 202 IGGD 205 IG D Sbjct: 438 IGSD 441 >gi|221639813|ref|YP_002526075.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides KD131] gi|254783534|sp|B9KKC7|SYT_RHOSK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|221160594|gb|ACM01574.1| Threonyl-tRNA synthetase [Rhodobacter sphaeroides KD131] Length = 646 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 12/184 (6%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + + +R + G E+ P + LW SG +++Y + Sbjct: 260 LQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQVVDRKLWEASGHWEAYKE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + + A P + ++ +KSYR+LP + R E Sbjct: 320 NMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRYESSGS 379 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP--- 201 G+MR R F+ DA+ F E S F+ L ++ LG S ++ + P Sbjct: 380 MHGLMRVRGFVQDDAHIF--CTEDQIESECAAFIELLSSVYKDLGFDSFEIKLSTRPEVR 437 Query: 202 IGGD 205 IG D Sbjct: 438 IGSD 441 >gi|305664978|ref|YP_003861265.1| prolyl-tRNA synthetase [Maribacter sp. HTCC2170] gi|88707390|gb|EAQ99635.1| prolyl-tRNA synthetase [Maribacter sp. HTCC2170] Length = 491 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/162 (20%), Positives = 75/162 (46%), Gaps = 5/162 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + G ++ F +GK YV S+G+ + R++ A++ + D G+ Sbjct: 233 GKALQAGTSHFLGQNFAKAFDVKFATKEGKQEYVWATSWGV-STRLMGALVMTHSDDSGL 291 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKI---YARLSKVGCDVFWDDM-GEQIGSQFAV 394 + P +AP ++ ++ I + EK+ L G V +D + G +F Sbjct: 292 VLPPKLAPIQVVIVPIYRGLEQLDAISEKVGPLVKELRAKGISVKYDSRDTHKPGFKFNE 351 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +L G P+++ +G + + + E+ R T + + +EV++ Sbjct: 352 YELKGVPVRLAIGQRDMENGTYEVARRDTFEKVTIPEDEVVS 393 Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 2/98 (2%) Query: 85 RYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDEL 143 + D GK ++ D + ++ +I PT E ++ D +R I+SYR+LP Q R E+ Sbjct: 98 KNDESGKGIIVDPDAKLEEELIVRPTSETIIWDTYRKWIQSYRDLPLLINQWANVVRWEM 157 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 R R +R+ EFL ++ ++ T + + +M Y Sbjct: 158 RTRL-FLRTAEFLWQEGHTAHATEKEAIEEAEQMMHVY 194 >gi|325288434|ref|YP_004264615.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324963835|gb|ADY54614.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 636 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 2/135 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H G + P G + + R+E + G +E+ P + + LW +SG +D Y K Sbjct: 255 LHDEGPGFPFFHPKGMVIRNLLEDFWRKEHFKRGYVEIKTPIILNRALWEQSGHWDHY-K 313 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + P + ++++ ++SYR+LP ++ L R EL G++ Sbjct: 314 ENMYFTKIDGVDFAVKPMNCPGGMIMYKTKLRSYRDLPIRCGELGLVHRHELSGALHGLL 373 Query: 151 RSREFLMKDAYSFDL 165 R R F DA+ F L Sbjct: 374 RVRNFTQDDAHIFML 388 >gi|157370384|ref|YP_001478373.1| threonyl-tRNA synthetase [Serratia proteamaculans 568] gi|166987325|sp|A8GDQ5|SYT_SERP5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157322148|gb|ABV41245.1| threonyl-tRNA synthetase [Serratia proteamaculans 568] Length = 642 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E + N+ ++ G I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVRAEVNECIRMVYDVYGTFGFDKIAVKLSTRPEKRIGTD 431 >gi|19112954|ref|NP_596162.1| cytoplasmic proline-tRNA ligase Prs1 (predicted) [Schizosaccharomyces pombe 972h-] gi|74582353|sp|O60155|YHY6_SCHPO RecName: Full=Putative prolyl-tRNA synthetase C19C7.06; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|3218410|emb|CAA19574.1| cytoplasmic proline-tRNA ligase Prs1 (predicted) [Schizosaccharomyces pombe] Length = 716 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 45/88 (51%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 304 DEPIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNPQPFLRTREFLWQEG 363 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ +T EG+ +++ Y RI+ L Sbjct: 364 HTAHMTLEGATEEVHQILDLYARIYTDL 391 >gi|315230254|ref|YP_004070690.1| threonyl-tRNA synthetase [Thermococcus barophilus MP] gi|315183282|gb|ADT83467.1| threonyl-tRNA synthetase [Thermococcus barophilus MP] Length = 625 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 70/330 (21%), Positives = 131/330 (39%), Gaps = 50/330 (15%) Query: 124 SYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP Y++ + FR E R G+ R R F M D ++ + + + K + Sbjct: 311 SYKHLPLRMYELTRYSFRREKRGELSGLRRLRAFTMPDMHTVAKDLKQAMEEFKKQYKLS 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD- 240 + + +GL D E + ++DF + EN DF Sbjct: 371 MEVLKGVGLTP----------------------DDYEVAIRFTEDFWN-----ENKDFVV 403 Query: 241 ---DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 II ++E W + D+L + +S I+V + FG Sbjct: 404 ELVKIIGKPVLIEMWKQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERFGI----- 458 Query: 298 MSATFKGADGKD-HYVQMGSYGIGAM-RVVAAVIESS----HDGKGIIWPDSVAPFKISL 351 T+ DGK+ H + + GA+ RV+ A++E + GK ++P ++P ++ + Sbjct: 459 ---TYYDEDGKEKHPLILHCSPSGAIERVMYAILEKQAKLRNQGKKPMYPLWLSPIQVRV 515 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 I + ++ D I +L V DD +++ + A+ P ++VG Sbjct: 516 IPV---NEDYLDYALYIAGKLEGARIRVDVDDTSDRLTKKIRKAEKEWIPYIIVVGENEK 572 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHR 441 + ++ R G + +M LE++I R Sbjct: 573 RQGIITVRKREDGKQYEMQLEDLIKEIKQR 602 >gi|237752912|ref|ZP_04583392.1| threonyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] gi|229375179|gb|EEO25270.1| threonyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] Length = 605 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + N+ ++ + G + P + + +W SG Y +YG+ M Sbjct: 231 GLPIWLPKGARLRRNLENLLTQALIERGYEPVRGPEILKSAVWKTSGHYANYGENMY-FT 289 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + ++++ + SYR LP FY+ + R E G++R REF Sbjct: 290 TIDEVEYGIKPMNCVGHIKVYQNSLHSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFT 349 Query: 157 MKDAYSF 163 DA+ F Sbjct: 350 QDDAHIF 356 >gi|303284080|ref|XP_003061331.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457682|gb|EEH54981.1| predicted protein [Micromonas pusilla CCMP1545] Length = 489 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 67/336 (19%), Positives = 131/336 (38%), Gaps = 76/336 (22%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ +F I+SYR+LP Q R E+R R +R+ EFL ++ Sbjct: 97 EEPLVVRPTSETIVNHMFSQWIQSYRDLPLLMNQWANVHRWEMRTR-PFIRTLEFLWQEG 155 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E ++ +M D+ EF Sbjct: 156 HTAHATAEEAEERAVQMI--------------------------DVYREF---------- 179 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 ++D P+ I+ S VE + + +N +++ +KR Sbjct: 180 ---AEDVAAMPV---------IVGRKSRVETF-------AGANNTYTIEAMMGDKR---- 216 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI-- 338 ++ G G ++ TF +GK +V S+G+ + R++ +I + D G+ Sbjct: 217 ALQAGTSHNLGQNFAKAFDTTFLDENGKTQHVHQSSWGV-STRLIGGIIMTHGDDVGLRR 275 Query: 339 ---------IWPDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDV-FWDDMG 385 P ++AP ++ ++ I + + A + L+ G V DD Sbjct: 276 VLYTGPHTTALPPALAPIQVVVVPIAQKNKDKESVNAAASAVVKTLTDAGVRVKLDDDER 335 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +FA ++ G P++V +G K V++ + R Sbjct: 336 NSPGWKFAQWEMKGVPIRVEIGPKDVANDACVLARR 371 >gi|189091896|ref|XP_001929781.1| hypothetical protein [Podospora anserina S mat+] gi|27803058|emb|CAD60761.1| unnamed protein product [Podospora anserina] gi|188219301|emb|CAP49281.1| unnamed protein product [Podospora anserina S mat+] Length = 783 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 17/165 (10%) Query: 15 PRDAEIASHKLMLRTGMIHQH---------------SKGIYSWLPLGQKALDNVNAIIRE 59 P ++A+HK L H S G WLP G + + + I+E Sbjct: 299 PDKKQMAAHKKFLEEAAKRDHRLIGKQQELFYFEECSPGSAMWLPHGMRIHNAIMDYIKE 358 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E G E+ P + + LW +SG Y ++M L D + + P + +FR Sbjct: 359 EYWARGYDEVMTPNMFNVSLWEQSGHLAHYKEDMF-LLDVDKEQFGLKPMNCPAHAMMFR 417 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 +S++ LP + R+E G+ R R F DA+ F Sbjct: 418 HRERSHKELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIF 462 >gi|260463880|ref|ZP_05812076.1| threonyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] gi|259030255|gb|EEW31535.1| threonyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] Length = 658 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 84/418 (20%), Positives = 153/418 (36%), Gaps = 52/418 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + G+ W G K N+ +R + G E++ P + LW SG + Y Sbjct: 260 QEEGPGVVFWHAKGWKMFQNLVNYMRRRLDEQGYQEVNAPQVLDKSLWETSGHWGWYRDA 319 Query: 93 MLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 M ++ +D+ P + IF+ +KSYR+LP + R E Sbjct: 320 MFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDLPVKLAEFGNVHRYEPSGAL 379 Query: 148 -GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IG 203 G+MR R F DA+ F T E ++ L + G + + ++ + P +G Sbjct: 380 HGLMRVRGFTQDDAHIF-CTEEQLAAECLRINDLILSTYADFGFEEVSVKLSTRPDKRVG 438 Query: 204 GD--LSHEFIVLADTGETQVFCSKDFMDFPI-PSENTDFD---DIISLNSIVEQWTAPYA 257 D H ++ + ET S + + I P E + + + ++I +W Sbjct: 439 TDEAWDHAEAIMGNVLETIRTRSGNRIKTSINPGEGAFYGPKFEYVLKDAIGREWQ---C 495 Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 T+ V +LPE R A FY G+ K V + Sbjct: 496 GTTQVDF-----NLPE--RFGA--------FYIGSDSE------------KKQPVMVHRA 528 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+M ++ ++ G +W AP ++ + I + ++ A+L G Sbjct: 529 ICGSMERFLGILIENYSGHFPLW---FAPLQVVVATITSE---ADGYATEVVAKLKAAGL 582 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+I + L P+ ++ G + + V I+ + ++ + L E I Sbjct: 583 LAEADLRNEKINYKVREHSLAKVPVILVCGKREAEEQTVNIRRLGSRDQQSLGLAEAI 640 >gi|205356549|ref|ZP_03223312.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] gi|205345554|gb|EDZ32194.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] Length = 510 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 91/448 (20%), Positives = 175/448 (39%), Gaps = 51/448 (11%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD +L L T + G+ WL G + + ++ + Sbjct: 103 KEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRL 161 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L AD W SG Y +Y KE + +++ P + I++S ++ Sbjct: 162 RGYEPVRGPELLKADAWKISGHYANY-KENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVR 220 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM-FV-S 180 SYR+LP F++ + R E G+ R REF DA+ F + + + + FV + Sbjct: 221 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDN 280 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +++F D S+E + T + + + + D Sbjct: 281 LMKLF-------------------DFSYEMEI--STKPEKAIGDDEIWEIATKALKEALD 319 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ K+ D+L R + G I ++LP Sbjct: 320 EQGLKYGIDEGGGAFYGPKIDI---KITDAL-------KRKWQCGTI---QVDFNLPSRF 366 Query: 301 TFKGADG---KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KA 356 + D K V + +G+ ++ G+ +P +AP + ++ I +A Sbjct: 367 KLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGE---FPFFIAPTAVGIVPIGEA 423 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 H ++ I L ++ D + E + + +A+ P+ +++G V+ V Sbjct: 424 HIAYAKE----IQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSV 479 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ R ++++SL+E I + S Sbjct: 480 ALRDRRAKEQKNLSLDEFIKLVKEKMSE 507 >gi|157414515|ref|YP_001481771.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|172047019|sp|A8FK07|SYT_CAMJ8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157385479|gb|ABV51794.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|307747157|gb|ADN90427.1| Threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1] gi|315932015|gb|EFV10968.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327] Length = 602 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 4/161 (2%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD +L L T + G+ WL G + + I+ + Sbjct: 195 KEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHILYKIHRL 253 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L AD W SG Y +Y KE + +++ P + I++S ++ Sbjct: 254 RGYEPVRGPELLKADAWKISGHYANY-KENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVR 312 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP F++ + R E G+ R REF DA+ F Sbjct: 313 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIF 353 >gi|71002510|ref|XP_755936.1| prolyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|66853574|gb|EAL93898.1| prolyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|159129993|gb|EDP55107.1| prolyl-tRNA synthetase [Aspergillus fumigatus A1163] Length = 637 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 43/88 (48%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 200 EKKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEG 259 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ LT E ++ M Y RI+ L Sbjct: 260 HTAHLTEEAAREEVLHMLNLYARIYEEL 287 >gi|302820128|ref|XP_002991732.1| hypothetical protein SELMODRAFT_134156 [Selaginella moellendorffii] gi|300140413|gb|EFJ07136.1| hypothetical protein SELMODRAFT_134156 [Selaginella moellendorffii] Length = 647 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 5/151 (3%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +A+ H+L+ + + H+ S G +LP G + + IR E + G E+ P Sbjct: 272 EAKKRDHRLLGKNQQLFFFHELSPGSAFFLPKGTIVYNKLLQFIRSEYRKRGFDEVVTPN 331 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + + LW +SG Y KE + + + + P + +F+ ++SYR LP Sbjct: 332 IYNMKLWEQSGHAAHY-KENMFVFEIEKQEFGLKPMNCPGHCLLFQHRVRSYRELPLRIA 390 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + R+EL G+ R R F DA+ F Sbjct: 391 DFGVLHRNELSGALTGLTRVRRFSQDDAHIF 421 >gi|301768134|ref|XP_002919483.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Ailuropoda melanoleuca] Length = 723 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 85/417 (20%), Positives = 161/417 (38%), Gaps = 57/417 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 334 FFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVSPNIYNSRLWMTSGHWQHYS 393 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 394 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRIADFGVLHRNELSGALTGL 452 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 453 TRVRRFQQDDAHIFCAIEQIEDEI--KGCLDFLRTVYNVFGFSFKLNLSTRPEKFLGD-- 508 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + + E Q+ EN SLN E+W A Y D Sbjct: 509 ---IEVWNQAEKQL-------------EN-------SLNEFGEKWELNPGDGAFYGPKID 545 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L TF DG D V + + Sbjct: 546 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TFVSHDGDDKKRPVIVHRAIL 594 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G++ + A++ + GK WP ++P ++ ++ + C + +K+ + V Sbjct: 595 GSVERMIAILTENFGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFTV 648 Query: 380 FWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + +++G K + V I+ R + + ++ E I Sbjct: 649 DIDLDPGCTLNKKIRNAQLAQYNFILVIGEKEKASGTVNIRTRDNKVHGERTISETI 705 >gi|302339715|ref|YP_003804921.1| threonyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] gi|301636900|gb|ADK82327.1| threonyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] Length = 585 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 4/133 (3%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + ++E + G + P + + LW SG D Y + M Sbjct: 208 GLVYWHPKGARIRHQIETFWKDEHFKNGYELLYTPHVGKSWLWETSGHLDFYAEGMYPEM 267 Query: 98 DRNDKAMIYG-PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 DKA Y P + I++++ SYR LPF + ++ +R E G+MR R F Sbjct: 268 -VMDKANYYAKPMNCPFHIMIYKTNKHSYRELPFRWAELGTVYRYEKSGTLHGLMRVRGF 326 Query: 156 LMKDAYSFDLTPE 168 DA+ F TPE Sbjct: 327 TQDDAHIF-CTPE 338 >gi|282890339|ref|ZP_06298867.1| hypothetical protein pah_c016o048 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499721|gb|EFB42012.1| hypothetical protein pah_c016o048 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 641 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/210 (24%), Positives = 82/210 (39%), Gaps = 20/210 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRT------GMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 Y + + RD ++ KL L + GM H KG W + + A +R+ Sbjct: 230 YLTSVEEAKKRDHKVLGAKLDLFSLKEEAPGMPFIHPKGTIIW--------NELLAYLRQ 281 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 + IE+ PT+ + DLW SG + +Y + M ++ ++ P + +R Sbjct: 282 CLDDKNYIEIKTPTMMTRDLWELSGHWSNYRQNMF-TSEIENRDFAIKPMNCPGCMLYYR 340 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 I SYR LP +I R E G+ R R F DA+ F + P + + Sbjct: 341 GQIHSYRELPLRVAEIGNVHRFEPSGSLSGLFRVRSFHQDDAHIF-MKPSDIRSEILNVL 399 Query: 179 VSYLRIFHRLGLK---SIPMRAESGPIGGD 205 I+ GL + R E IG D Sbjct: 400 NLAHEIYSTFGLTYRLELSTRPEKNTIGTD 429 >gi|168012416|ref|XP_001758898.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690035|gb|EDQ76404.1| predicted protein [Physcomitrella patens subsp. patens] Length = 613 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 77/406 (18%), Positives = 150/406 (36%), Gaps = 48/406 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + ++ G + P + DLW SG Y+ Y + M Sbjct: 237 GLVFWHPKGSMVRHIIEDYWKKMHFANGYELLYTPHIAKLDLWKTSGHYEFYKENMFDQM 296 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + +++ ++SYR LP ++ +R E G+ R R F Sbjct: 297 RIEEELYQIRPMNCPFHIQVYKDSLRSYRELPMRVAELGTVYRYERSGALHGLFRVRGFT 356 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 D + F L P+ + + + + G + + P SHE + T Sbjct: 357 QDDGHIFCL-PDQIRDEIRGVLDLTEIVLKQFGFTKFEINLSTKPEKAVGSHEIWEKSTT 415 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + K + SI E A Y DV K+ D++ + Sbjct: 416 ALREALQDKGWE-----------------YSIDEGGGAFYGPKIDV---KIEDAIGRKWQ 455 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGAD---GKDHYVQMGSYGIGAMRVVAAVIESSH 333 S ++ ++LP D + + + +G++ ++ ++ Sbjct: 456 CSTIQVD----------FNLPERFNMVYVDTDTSRKQPILIHRAILGSIERFFGILVENY 505 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD---VFWDDMGEQIGS 390 G +W +AP + L+ + H+ D C+ + A+L + G VF GE++G Sbjct: 506 AGDFPLW---LAPVQARLLPVTDHEV---DYCKNVVAKLREKGIRAEVVF----GERLGK 555 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A+ P+ +VG K V + + ++ R G +SL+++ + Sbjct: 556 LIRNAETQKIPVMAVVGPKEVESATLTVRTRHGGELGTLSLDDLTH 601 >gi|145593399|ref|YP_001157696.1| tRNA synthetase, class II (G, H, P and S) [Salinispora tropica CNB-440] gi|145302736|gb|ABP53318.1| tRNA synthetase, class II (G, H, P and S) [Salinispora tropica CNB-440] Length = 405 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 12/133 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G A V +R+ + + G + P L +L+ SG D + +EM + Sbjct: 23 GLPLWLPAGAAARHAVEEYLRDLERQAGYQHVVTPPLGRRELFERSGHLDHFAEEMFPPM 82 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM---- 150 RL+ D ++ P+ ++R +S+R+LP ++ +R E R GV+ Sbjct: 83 RLS--ADDELVLRPSLCPHHALVYRCRGRSWRDLPLRIAEMGGMYRAE---RSGVLGGLA 137 Query: 151 RSREFLMKDAYSF 163 R R + DA++F Sbjct: 138 RVRAISLNDAHNF 150 >gi|146276901|ref|YP_001167060.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] gi|166225490|sp|A4WQU1|SYT_RHOS5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145555142|gb|ABP69755.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter sphaeroides ATCC 17025] Length = 646 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 77/185 (41%), Gaps = 14/185 (7%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + + +R + G E+ P + LW SG +++Y + Sbjct: 260 LQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRKAGYKEIRTPQVVDRKLWEASGHWEAYKE 319 Query: 92 EMLRLADRNDKAM-----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + + A P + ++ +KSYR+LP + R E Sbjct: 320 NMFLVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRYESSGS 379 Query: 147 F-GVMRSREFLMKDAYSF--DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP-- 201 G+MR R F+ DA+ F + EG ++ ++ S ++ LG S ++ + P Sbjct: 380 MHGLMRVRGFVQDDAHIFCTEDQIEGECAAFIELLSS---VYKDLGFDSFEIKLSTRPEV 436 Query: 202 -IGGD 205 IG D Sbjct: 437 RIGSD 441 >gi|158522069|ref|YP_001529939.1| prolyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] gi|158510895|gb|ABW67862.1| prolyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] Length = 508 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 14/162 (8%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ F+ GK+ S+G+ + R++ +I D G+I Sbjct: 235 KALQAGTSHFLGQNFARASKILFQSEQGKEELAWTTSWGV-STRLIGGLIMCHADDDGMI 293 Query: 340 WPDSVAPFKISLINIKAHD---QVCRDACEKIYARLSK-------VGCDVFWDDMGEQIG 389 P ++AP + L+ I D + + + ARL + VG ++ D+G G Sbjct: 294 MPPAIAPAHVVLLPIFKKDSDRETVMAYTDTLAARLREKQYMGRPVGVEIDTRDIGGARG 353 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 ++ G PL+V +G K + V + R G RE MS+ Sbjct: 354 WEWIKK---GIPLRVEIGPKDIEKQSVFVGRRDMGHREKMSV 392 >gi|52632425|gb|AAH10578.2| Threonyl-tRNA synthetase [Homo sapiens] Length = 723 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 164/418 (39%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 334 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 393 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 394 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 452 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 +R R F DA+ F + K + +LR + + S + + P GD Sbjct: 453 IRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 508 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 509 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 545 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 546 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 594 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 595 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 648 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 649 DIDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 705 >gi|328876049|gb|EGG24413.1| threonyl-tRNA synthetase [Dictyostelium fasciculatum] Length = 786 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 4/138 (2%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H +S G +LP G K + + + +R E R G E+ P + S LW SG + +Y Sbjct: 392 HPYSPGSCFFLPHGAKVYNKLLSFLRGEYRRRGYQEVITPNIYSQKLWEVSGHWQNYKDN 451 Query: 93 MLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M D ++ P + ++ ++SY+ LP + + R+E G+ Sbjct: 452 MFSFQCDHTTYSL--KPMNCPGHCLMYAHRVRSYKELPMRYADFGVLHRNETHGSLTGLT 509 Query: 151 RSREFLMKDAYSFDLTPE 168 R R F DA+ F T + Sbjct: 510 RVRRFQQDDAHIFCRTDQ 527 >gi|302816173|ref|XP_002989766.1| hypothetical protein SELMODRAFT_447798 [Selaginella moellendorffii] gi|300142543|gb|EFJ09243.1| hypothetical protein SELMODRAFT_447798 [Selaginella moellendorffii] Length = 564 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 5/151 (3%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +A+ H+L+ + + H+ S G +LP G + + IR E + G E+ P Sbjct: 164 EAKKRDHRLLGKNQQLFFFHELSPGSAFFLPKGTIVYNKLLQFIRSEYRKRGFDEVVTPN 223 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + + LW +SG Y KE + + + + P + +F+ ++SYR LP Sbjct: 224 IYNMKLWEQSGHAAHY-KENMFVFEIEKQEFGLKPMNCPGHCLLFQHRVRSYRELPLRIA 282 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + R+EL G+ R R F DA+ F Sbjct: 283 DFGVLHRNELSGALTGLTRVRRFSQDDAHIF 313 >gi|302816171|ref|XP_002989765.1| hypothetical protein SELMODRAFT_130418 [Selaginella moellendorffii] gi|300142542|gb|EFJ09242.1| hypothetical protein SELMODRAFT_130418 [Selaginella moellendorffii] Length = 647 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 5/151 (3%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +A+ H+L+ + + H+ S G +LP G + + IR E + G E+ P Sbjct: 272 EAKKRDHRLLGKNQQLFFFHELSPGSAFFLPKGTIVYNKLLQFIRSEYRKRGFDEVVTPN 331 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + + LW +SG Y KE + + + + P + +F+ ++SYR LP Sbjct: 332 IYNMKLWEQSGHAAHY-KENMFVFEIEKQEFGLKPMNCPGHCLLFQHRVRSYRELPLRIA 390 Query: 134 QIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + R+EL G+ R R F DA+ F Sbjct: 391 DFGVLHRNELSGALTGLTRVRRFSQDDAHIF 421 >gi|119482073|ref|XP_001261065.1| prolyl-tRNA synthetase [Neosartorya fischeri NRRL 181] gi|119409219|gb|EAW19168.1| prolyl-tRNA synthetase [Neosartorya fischeri NRRL 181] Length = 652 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 43/88 (48%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 186 EKKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEG 245 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ LT E ++ M Y RI+ L Sbjct: 246 HTAHLTEEAAREEVLHMLGLYARIYEEL 273 >gi|209526622|ref|ZP_03275147.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328] gi|209492990|gb|EDZ93320.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328] Length = 604 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 3/159 (1%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 Q G+ W P G + ++ EQ R G + P L +L+ SG + Y +++ Sbjct: 218 QVGPGLPLWTPKGTILRTTLEDFLKREQVRRGYQPVVTPHLGRVNLFKTSGHWQKYREDL 277 Query: 94 L-RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + + D+ + + I++S ++SYR LP + +R E G+ R Sbjct: 278 FPMMGESEDEGFVLKAMNCPFHVQIYKSSLRSYRELPIRLAEFGTVYRYEQSGELGGLTR 337 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 R F DA+ F +TPE + K+ + +L L Sbjct: 338 VRGFTQDDAHLF-VTPEQLDDEFLKVVDLIQSVLKKLKL 375 >gi|207744373|ref|YP_002260765.1| prolyl-trna synthetase protein [Ralstonia solanacearum IPO1609] gi|206595778|emb|CAQ62705.1| probable prolyl-trna synthetase protein [Ralstonia solanacearum IPO1609] Length = 84 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 38/60 (63%) Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 R ++++A L+ G DV DD GE+ G FA +L+G P +V+VG + + + K+E++ R Sbjct: 2 RAEADRLHAELAAAGIDVILDDRGERPGVMFADWELIGVPFRVVVGERGLKEGKLELQGR 61 >gi|291571004|dbj|BAI93276.1| threonyl-tRNA synthetase [Arthrospira platensis NIES-39] Length = 604 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 3/159 (1%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 Q G+ W P G + ++ EQ R G + P L +L+ SG + Y +++ Sbjct: 218 QVGPGLPLWTPKGTILRTTLEDFLKREQVRRGYQPVVTPHLGRVNLFKTSGHWQKYREDL 277 Query: 94 L-RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + + D+ + + I++S ++SYR LP + +R E G+ R Sbjct: 278 FPMMGESEDEGFVLKAMNCPFHVQIYKSSLRSYRELPIRLAEFGTVYRYEQSGELGGLTR 337 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 R F DA+ F +TPE + K+ + +L L Sbjct: 338 VRGFTQDDAHLF-VTPEQLDDEFLKVVDLIQSVLKKLKL 375 >gi|226528192|ref|NP_001140354.1| hypothetical protein LOC100272402 [Zea mays] gi|194699134|gb|ACF83651.1| unknown [Zea mays] Length = 285 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 5/162 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RGI+ G ++ TF+ G V S+ R + ++ + D KG Sbjct: 20 TGRGIQGATSHCLGQNFAKMFDITFENEKGVREMVWQNSWAY-TTRSIGVMVMTHGDDKG 78 Query: 338 IIWPDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFA 393 ++ P VAP ++ +I + D + ACE L + G D G +++ Sbjct: 79 LVLPPKVAPIQVIVIPVPYKDADTTAIKGACESTVYTLDQSGIRADQDTRENYSPGWKYS 138 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++ G PL++ +G K +++ +V + R G + D+ + ++ Sbjct: 139 HWEMKGVPLRIEIGPKDLANKQVRVVRRDNGAKVDIPVTNLV 180 >gi|324504606|gb|ADY41988.1| Bifunctional aminoacyl-tRNA synthetase [Ascaris suum] Length = 401 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 70/329 (21%), Positives = 127/329 (38%), Gaps = 74/329 (22%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + ++S+R+LP Q R E + +R+REFL ++ ++ T Sbjct: 9 PTSETVMYPSYAKWVQSHRDLPIRLNQWCNVVRWEFKHPTPFLRTREFLWQEGHTAFHTA 68 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + ++ ++ Y +I+ L +IP +V E + F DF Sbjct: 69 KEAETEVYQILDLYAQIY--TDLLAIP----------------VVKGRKSEKEKFAGGDF 110 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + VE + V+ R I+ Sbjct: 111 ------------------TTTVEAYVP----------------------VNGRSIQGATS 130 Query: 288 FYFGTKYSLPMSATFKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 + G +S +F+ D G Y S+G+ + R + A+I D G++ P VA Sbjct: 131 HHLGQNFSKMFDISFEEPDKGGKAYAWQNSWGL-STRTIGAMIMIHGDDNGLVLPPRVAA 189 Query: 347 FKISLINIKAHDQ---------VCRDACEKIYARLSKVGCDVFWDDMGEQI--GSQFAVA 395 ++ ++ + Q +C+ E+I L VG D+ + G +F Sbjct: 190 IQMIVVPVGVTAQTSEEQRKMLICK--AEEITDLLVSVGIRAE-SDLRDNYSPGWKFNHW 246 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +L G P++V VG + V++++V RL+G Sbjct: 247 ELKGVPVRVEVGPRDVANNQVTCVIRLSG 275 >gi|224475774|ref|YP_002633380.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|222420381|emb|CAL27195.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] Length = 635 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 87/408 (21%), Positives = 160/408 (39%), Gaps = 46/408 (11%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 +++ G+ + GQ + ++R+ Q E+ P + LW SG +D Y M Sbjct: 254 EYAPGMPFYAHNGQVIRLELQNMLRQLQFEADYEEVYTPFIMDETLWKNSGHWDHYQDNM 313 Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 + +++ P + I+++H+ SYR+LP + R EL G+ R Sbjct: 314 Y-FTEVDEQTYALKPMNCPGHMLIYKNHLHSYRDLPIRMAEFGQVHRHELSGSLNGLFRV 372 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F + + L + H++ G D S E Sbjct: 373 RTFNQDDAHIF-----VRRDQIESEILDVLGLIHKV----------YSVFGFDYSIELST 417 Query: 213 LAD--TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D GE +++ DF S + ++ E+ A Y D+H + D+ Sbjct: 418 RPDDFMGEIELW------DFAEQSLENMLNQHGFKYTVNEKDGAFYGPKIDIH---IKDA 468 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAA 327 L + + ++ F K+ L TF G+ + YG + R + Sbjct: 469 LGRSHQCGTVQLD----FQMPEKFDL----TFINQAGEKERPVVIHRAIYG-SSDRFIGI 519 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++E H G + P +AP ++ +I + A + DA + + RL K G V D E+ Sbjct: 520 LLE--HFGGNL--PLWLAPVQMEVILVNA--DLHLDAVKDLKRRLKKEGFRVELDLSDEK 573 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +G + A L P ++VG V + V ++ R +++E+ + Sbjct: 574 MGYKIRQAHLKKVPYTLVVGDNEVENGTVAVRKRGESEEHSINVEDFV 621 >gi|145251301|ref|XP_001397164.1| prolyl-tRNA synthetase YHR020W [Aspergillus niger CBS 513.88] gi|134082695|emb|CAK42588.1| unnamed protein product [Aspergillus niger] Length = 604 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 43/88 (48%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 187 EKKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEG 246 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ LT EG+ + Y RI+ L Sbjct: 247 HTAHLTKEGAHEEVMTILDLYARIYEEL 274 >gi|119631208|gb|EAX10803.1| threonyl-tRNA synthetase, isoform CRA_a [Homo sapiens] Length = 619 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 230 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 289 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 290 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 348 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 349 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 404 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 405 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 441 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 442 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 490 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 491 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 544 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 545 DIDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 601 >gi|328953980|ref|YP_004371314.1| threonyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328454304|gb|AEB10133.1| threonyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 640 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 93/411 (22%), Positives = 160/411 (38%), Gaps = 61/411 (14%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G + + R E R G + PTL DLW SG +++Y + M Sbjct: 263 GLVIYHPKGARLRLVLEDFERREHLRRGYQIVMGPTLLKLDLWKRSGHFENYRENMYFT- 321 Query: 98 DRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM----R 151 + + YG P + I++S I+SYR LP +++ R E R GV+ R Sbjct: 322 --EIEGIDYGIKPMNCLAHMLIYKSSIRSYRELPLRLFELGTVHRHE---RSGVLHGLTR 376 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLSH 208 R+F DA+ P+ + + + G + + R E IG D Sbjct: 377 VRQFTQDDAHIL-CRPDQVETEIAGVIDFVAEVMAVFGFEYEVELSTRPEKS-IGSDEDW 434 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 E A Q + N F + E A Y D+ KL Sbjct: 435 ERATSALINALQ-------------TRNLPF-------ATCEGEGAFYGPKIDI---KLK 471 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAA 327 D++ N+R ++ F ++ L T+ G DG H V + +G++ Sbjct: 472 DAI--NRRWQCATVQCD--FTLPERFDL----TYIGPDGNPHRPVMLHRVILGSLERFLG 523 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 V+ + G +W +AP + ++ + +AH D ++ A +V D+ Sbjct: 524 VLIEHYAGAFPVW---LAPVQAIILPVTDRAHP-FALDVARRLQAEELRVETDL----RN 575 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR-EDMSLEEVI 435 E++G + A L P +I+G + V+ + ++ RL G +D EE + Sbjct: 576 EKLGLKIREAQLQKIPYMIIIGDREVAAQTLSVR-RLDGTEIKDTPWEEFV 625 >gi|317057674|ref|YP_004106141.1| threonyl-tRNA synthetase [Ruminococcus albus 7] gi|315449943|gb|ADU23507.1| threonyl-tRNA synthetase [Ruminococcus albus 7] Length = 648 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 86/400 (21%), Positives = 153/400 (38%), Gaps = 46/400 (11%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ LP G K + + I +E+ + G P + +L+ SG +D Y M Sbjct: 261 GQGLPILLPKGAKVIQTLQRWIEDEEYKRGYQLTKTPFMSKRELYKISGHWDHYRDGMFI 320 Query: 96 LADRNDK---AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 L D +D+ P +F + +SYR+LP + FR+E G++R Sbjct: 321 LGDPDDETKECFALRPMTCPFQYQVFLNRKRSYRDLPMRLGETSTLFRNEDSGEMHGLIR 380 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R+F + + + L PE + + +GL S + ++++ Sbjct: 381 VRQFTISEGHLI-LRPEQLEEEFKGCLDLAKYCLETIGLAEDVSYRFSQWDPANPNNKYE 439 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 A+ E K +D + D I ++ A Y D+ + +F Sbjct: 440 GTAEQWEEAQGAMKKILD------DIGLDYEIGIDE-----AAFYGPKLDIQIKNVFGK- 487 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK------DHYVQMGSYGIGAMRVV 325 E+ ++ + I++ FG +Y DGK H +G Y R + Sbjct: 488 -EDTLITIQ-IDMQIAKKFGMEYV--------DKDGKMKMPYIIHRTSVGCY----ERTL 533 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDM 384 A +IE + G +W +AP ++ ++ IK H+ D E+ + +G V D Sbjct: 534 ALLIE-KYAGVLPLW---LAPEQVRILPIKPEHNDYAYDLAEE----MRDLGMRVEVDAE 585 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + IG + A P I+G V D V ++ R G Sbjct: 586 DDNIGPKIKQARFDRVPYMFIIGDNEVKDGTVTVRSRKEG 625 >gi|240103065|ref|YP_002959374.1| threonyl-tRNA synthetase [Thermococcus gammatolerans EJ3] gi|259516771|sp|C5A5J8|SYT_THEGJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239910619|gb|ACS33510.1| Threonyl-tRNA synthetase (thrS) [Thermococcus gammatolerans EJ3] Length = 626 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 70/327 (21%), Positives = 132/327 (40%), Gaps = 42/327 (12%) Query: 117 IFRSHIKSYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSY 174 I + I SYRNLP Y++ + FR E G+ R R F M D ++ + + + Sbjct: 305 IKKDAIISYRNLPLRMYELTRYSFRREKSGELSGLRRLRAFTMPDMHTVAKDLKQAMDEF 364 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 K + + + +GL + + +H+F +KDF+ Sbjct: 365 KKQYKLSMEVLRGVGLTP-----DDYEVAIRFTHDFWE----------ANKDFI------ 403 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 + II ++E W + D+L + +S I+V + FG Sbjct: 404 --VELAKIIGKPVLIEMWDQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERFGI-- 459 Query: 295 SLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSH----DGKGIIWPDSVAPFK 348 T+ +GK+ Y + + GA+ RV+ A++E GK ++P ++P + Sbjct: 460 ------TYYDEEGKERYPLILHCSPSGAIERVMYAILEKQAKLQAQGKKPMFPLWLSPIQ 513 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 + +I + D V D + +L V DD +++ + A+ P ++VG Sbjct: 514 VRVIPV--SDDVL-DYALYVAGKLEGAKIRVDVDDTNDRLNKKIRKAEKEWVPYIIVVGK 570 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVI 435 + V ++ R G + +M LE++I Sbjct: 571 NEKEQNTVTVRRREDGKQVEMQLEDLI 597 >gi|154482657|ref|ZP_02025105.1| hypothetical protein EUBVEN_00330 [Eubacterium ventriosum ATCC 27560] gi|149736433|gb|EDM52319.1| hypothetical protein EUBVEN_00330 [Eubacterium ventriosum ATCC 27560] Length = 667 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 4/129 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIRE-EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ +P GQ+ + + I + E N G + P + +DL+ SG +D Y M Sbjct: 273 QGLPLLMPKGQRMIQKLQRWIEDLEDNEWGYVRTKTPLMAKSDLYKISGHWDHYKDGMFV 332 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 L D ++ P ++++ KSYR+LP + + FR+E G+ R Sbjct: 333 LGDEEKDKEVFALRPMTCPFQYYVYKASQKSYRDLPCRYGETSTLFRNEDSGEMHGLTRV 392 Query: 153 REFLMKDAY 161 R+F + + + Sbjct: 393 RQFTISEGH 401 Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 15/128 (11%) Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEK 367 H +G Y R +A +IE + GK W P+ V IS ++ D K Sbjct: 532 HRTSIGCYE----RTLAWLIEK-YAGKFPTWLCPEQVRVLPISDKYVEYAD--------K 578 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + A L K G DV D E+IG + A L P ++VG + +D V ++ R G Sbjct: 579 VAAELKKNGIDVTVDSRSEKIGYKIREARLDKLPYMLVVGQQEEADETVSVRSRFAGDEG 638 Query: 428 DMSLEEVI 435 L+E I Sbjct: 639 VKPLDEFI 646 >gi|50364993|ref|YP_053418.1| threonyl-tRNA synthetase [Mesoplasma florum L1] gi|50363549|gb|AAT75534.1| threonyl-tRNA synthetase [Mesoplasma florum L1] Length = 644 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/149 (22%), Positives = 71/149 (47%), Gaps = 8/149 (5%) Query: 23 HKLMLRT----GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD 78 H+++ +T G H G+ W+P G + + ++E++ I ++ P + + + Sbjct: 242 HRIINKTLKIFGFDHLVGPGLPLWMPNGTIVKEEIKKYLKEKEWEYDYINVTTPVIGTVE 301 Query: 79 LWVESGRYDSYGKEMLRL---ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 L+ +SG +D YG++M + +D+ I P + +++ +SYR+LP + Sbjct: 302 LYKKSGHWDHYGEDMFQPFNGGSGSDEQFILRPMNCPHHVAVYKQEQRSYRDLPLRIAEH 361 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSF 163 L+ R E G+ R R + D++ F Sbjct: 362 ALQHRYESSGSLTGLERVRAMELTDSHIF 390 >gi|315635477|ref|ZP_07890743.1| threonine--tRNA ligase [Arcobacter butzleri JV22] gi|315480235|gb|EFU70902.1| threonine--tRNA ligase [Arcobacter butzleri JV22] Length = 602 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 83/405 (20%), Positives = 168/405 (41%), Gaps = 47/405 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + G + P + A++W SG Y +Y KE + Sbjct: 228 GLPMWLPKGARLRSKLEHLLYKAHRIRGYEPVRGPEILKAEMWKISGHYANY-KENMYFT 286 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +D+ P + IF++++ SY+ LP ++ + R E+ G+ R REF Sbjct: 287 TIDDQEYGIKPMNCVGHIQIFKNNLVSYKELPKKLFEYGVVHRHEMSGAMHGLFRVREFT 346 Query: 157 MKDAYSFDLTPEGSKHSYNKM-FV-SYLRIF---HRLGLKSIPMRAESGPIGGDLSHEFI 211 D++ F + + + + FV + L++F + + + + P +A IG D+ E Sbjct: 347 QDDSHIFCTQDQIKQVIFEVLEFVDTLLKVFDFKYEIEVSTKPEKA----IGDDIFWE-- 400 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +K MD + N + I E A Y D+ K+ D++ Sbjct: 401 ----------KTTKGIMD-ALDENNISY-------GIDEGGGAFYGPKIDI---KILDAI 439 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + +++ F +Y KG K+ V + +G+ ++ Sbjct: 440 GRKWQCGTVQVDMNLPSRFNVEY-----INEKGE--KEQPVMIHRAILGSFERFIGILTE 492 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G+ +P +AP ++ + I A V + +++ L + D +M E + + Sbjct: 493 HCAGE---FPFIIAPTQVIFVPI-ADSHV--EYAKELQKALLENDLDSEIYNMNESLNKR 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +A+ P+ V++G + V + V +++R T + +MS E I+ Sbjct: 547 IRMAEKQRVPMIVVIGDEEVENKTVALRNRRTREQSNMSKNEFIS 591 >gi|78188687|ref|YP_379025.1| prolyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] gi|114152180|sp|Q3ASP3|SYP_CHLCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78170886|gb|ABB27982.1| prolyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] Length = 481 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 18/186 (9%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G G ++ F+ + YV S+G+ + R++ A+I + D +G++ Sbjct: 220 KALQAGTSHDLGQNFAKAFDCKFQTHEKTLEYVWATSWGV-STRLIGALIMAHSDDRGLV 278 Query: 340 WPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVADL 397 P +A ++ +I I K + + I A L+K G F D + G +FA +L Sbjct: 279 LPPRLATRQVVIIPILKGDKESVLHHADNIAAALTKAGISAFVDSSEQNSPGWKFAEYEL 338 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIRED--------MSLEEVIN-------YASHRF 442 G PL++ +G + + + + R T + + MS+ E++N A+ RF Sbjct: 339 QGIPLRLELGPRDIKNGMCVVARRDTLEKTEIALDDRLVMSINEILNDIQQDMFDAALRF 398 Query: 443 SNNRPV 448 R V Sbjct: 399 RQERTV 404 Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ I+SYR+LP Q R E+R R +R+ EFL ++ ++ T Sbjct: 108 PTSETIIWSSYKKWIQSYRDLPLLINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHATH 166 Query: 168 EGSKHSYNKMFVSY 181 E ++ +M Y Sbjct: 167 EEAQEEVLRMINVY 180 >gi|225026720|ref|ZP_03715912.1| hypothetical protein EUBHAL_00972 [Eubacterium hallii DSM 3353] gi|224955955|gb|EEG37164.1| hypothetical protein EUBHAL_00972 [Eubacterium hallii DSM 3353] Length = 650 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIRE-EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ LP G K + + I + E N G + P + +DL+ SG +D Y + M Sbjct: 259 QGLPLLLPKGAKIIQTLQRWIEDLEDNEWGYVRTKTPLMAKSDLYKISGHWDHYKEGMFV 318 Query: 96 LAD-RNDKAMI-YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 L D NDK ++ P +++ KSYR+LP+ + FR+E G+ R Sbjct: 319 LGDEENDKEVLALRPMTCPFQYYCYKNTQKSYRDLPYRMSETSTLFRNEDSGEMHGLTRV 378 Query: 153 REFLMKDAY 161 R+F + + + Sbjct: 379 RQFTISEGH 387 >gi|189055088|dbj|BAG38072.1| unnamed protein product [Homo sapiens] Length = 711 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 322 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 381 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 382 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 440 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 441 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRAVYSVFGFSFKLNLSTRPEKFLGD-- 496 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 497 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 533 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 534 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 582 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 583 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 636 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 637 DIDLDP-GCTLNKKIRNAQLAQYNFTLVVGEKEKISGTVNIRTRDNKVHGERTISETI 693 >gi|31544425|ref|NP_853003.1| prolyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|81834139|sp|Q7NBP5|SYP_MYCGA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|31541270|gb|AAP56571.1| Prolyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|284930481|gb|ADC30420.1| Prolyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)] Length = 474 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 11/180 (6%) Query: 24 KLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSA-DLWV 81 +++ + +IH + KG S+LP G K + + +E ++ +E+ +P+L S D + Sbjct: 21 EVISKGNLIHYSNIKGFMSFLPNGWKIWQLIKKELTKEFDQRDILELCLPSLISQNDFLL 80 Query: 82 ESGRYDSYGKEMLRLADRNDKA--MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 E + + E+ + +++ I PT E +++R +++YR LP Q F Sbjct: 81 EKKHLEGFAPELFIVTKTSNETEKYILRPTSEIAFCNLWRETLRNYRQLPIKHNQWTSVF 140 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL--GLKSIPMRA 197 R E R +R+ EF + +S T E S N V +++ R + IP+ A Sbjct: 141 RVEKNTR-PFLRNSEFFWHEIHSCFETEEQS----NDFAVDIWKLYQRFIKDILCIPLVA 195 >gi|289523104|ref|ZP_06439958.1| threonine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503647|gb|EFD24811.1| threonine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 624 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 2/121 (1%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA 103 P G L+ + R+ + G E+ P + DLW+ SG +D Y +E + + + K Sbjct: 254 PKGVVVLNVLVDFWRKVHVQRGYQEIKTPLILDQDLWIRSGHWDHY-RENMYFTEIDGKP 312 Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYS 162 P + +++S ++SYR+ P ++ + R E G+MR R F DA+ Sbjct: 313 FAIKPMNCPGGILVYKSQLRSYRDFPLKLAELGVVHRHERSGVLHGLMRVRCFTQDDAHI 372 Query: 163 F 163 F Sbjct: 373 F 373 >gi|294954482|ref|XP_002788190.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] gi|294954484|ref|XP_002788191.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] gi|239903405|gb|EER19986.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] gi|239903406|gb|EER19987.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] Length = 720 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 13/160 (8%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + R ++ + GT ++ F+ DG+ + + S+G R + +I D K Sbjct: 426 CNGRAVQGATSHFLGTHFAKMFGIEFEDRDGEKKFAEQTSWGF-TTRSIGVMIMEHGDDK 484 Query: 337 GIIWPDSVAPFKISLINIKAH-----------DQVCRDACEKIYARLSKVGCDVFWDDMG 385 G++ P VA ++ ++ I ++ + C+ IY L G V DD Sbjct: 485 GLVLPPRVAEVQVVIVPIPPKGAGAQWSTAELKEMIGEKCKSIYEDLKANGVRVVLDDRE 544 Query: 386 EQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ G +F +L G PL++ VG+K + V R +G Sbjct: 545 DKTPGYKFNHWELKGVPLRIEVGAKDLEKGVVTFVRRNSG 584 >gi|313127085|ref|YP_004037355.1| prolyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] gi|312293450|gb|ADQ67910.1| prolyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] Length = 488 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 4/156 (2%) Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 GT ++ T+ D + S+G+ + R + A+I + D +G++ P +VAP ++ Sbjct: 238 LGTSFAEAFDLTYTDEDEESQVAHTTSWGL-SWRALGALIMTHSDDQGLVLPHTVAPEQV 296 Query: 350 SLINIKAHD--QVCRDACEKIYARLSKVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVIV 406 ++ I D + + E I L G V DD E+ G +F +L G P++ + Sbjct: 297 VIVPIWQADTQEKVLEYAESISEELEDAGIRVELDDRDERNPGFKFNEWELKGVPVRFEI 356 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G V D V + HR G ++++ E++ F Sbjct: 357 GPNEVDDDVVTVVHRPDGETKEVAREDIAETVREEF 392 >gi|152978995|ref|YP_001344624.1| threonyl-tRNA synthetase [Actinobacillus succinogenes 130Z] gi|171704313|sp|A6VNZ2|SYT_ACTSZ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|150840718|gb|ABR74689.1| threonyl-tRNA synthetase [Actinobacillus succinogenes 130Z] Length = 643 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 80/397 (20%), Positives = 143/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G + +YG Sbjct: 256 MQEEAPGMVFWHNDGWTVFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYGD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + I+ G I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIRMVYDIYGTFGFTDIAVKLSTRPEKRIGAD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 E A+ G + +++ I F Y + Sbjct: 432 -EMWDRAEQGLANAL-KHNALEYEIQEGEGAF----------------YGPKIEFALRDC 473 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D R + G I ++LP ++A++ D M I G++ Sbjct: 474 LD----------REWQCGTI---QLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +I + G +P +AP + ++NI + +K+ +LS G V D Sbjct: 521 FIGIITEEYAG---FFPAWLAPVQAVVMNITDSQA---EYVQKVVKQLSDAGLRVKADLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++G + L P ++ G K +++ KV ++ R Sbjct: 575 NEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTR 611 >gi|325967867|ref|YP_004244059.1| glycyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] gi|323707070|gb|ADY00557.1| glycyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] Length = 591 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 6/121 (4%) Query: 320 GAMRVVAAVIESSH---DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 G R+V +E ++ +GK ++ P +AP K++++ I + I+ LS V Sbjct: 446 GVDRIVYVTLEHAYTEVNGKPLLRLPPDIAPIKVAVLPIIKKQEYV-SIGRNIFRELSMV 504 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +DD G IGS++A D +G P + + K DS V I+ R T + +S+ ++I Sbjct: 505 GVKAVYDDDG-AIGSRYAKYDSVGVPFAITIDDKTPIDSTVTIRDRDTKAQIRVSMNDII 563 Query: 436 N 436 Sbjct: 564 K 564 >gi|284052870|ref|ZP_06383080.1| threonyl-tRNA synthetase [Arthrospira platensis str. Paraca] Length = 508 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 3/159 (1%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 Q G+ W P G + ++ EQ R G + P L +L+ SG + Y +++ Sbjct: 218 QVGPGLPLWTPKGTILRTTLEDFLKREQVRRGYQPVVTPHLGRVNLFKTSGHWQKYREDL 277 Query: 94 L-RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + + D+ + + I++S ++SYR LP + +R E G+ R Sbjct: 278 FPMMGESEDEGFVLKAMNCPFHVQIYKSSLRSYRELPIRLAEFGTVYRYEQSGELGGLTR 337 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 R F DA+ F +TPE + K+ + +L L Sbjct: 338 VRGFTQDDAHLF-VTPEQLDDEFLKVVDLIQSVLKKLKL 375 >gi|146319436|ref|YP_001199148.1| seryl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|145690242|gb|ABP90748.1| Seryl-tRNA synthetase [Streptococcus suis 05ZYH33] Length = 428 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 8/143 (5%) Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + D +G+Y + ++ LAD N + PT E +T+ +R+ I Sbjct: 232 GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYYRNEILE 288 Query: 125 YRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++LP F + FR E R G++R +F + F TPE S KM + Sbjct: 289 EKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-ATPEQSYDELEKMTAN 347 Query: 181 YLRIFHRLGLKSIPMRAESGPIG 203 I +LGL + +G +G Sbjct: 348 AENILQKLGLPYRVLALCTGDMG 370 >gi|323342132|ref|ZP_08082365.1| threonine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464557|gb|EFY09750.1| threonine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 596 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 89/405 (21%), Positives = 153/405 (37%), Gaps = 57/405 (14%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L M+ + G WLP G ++ + G + PT+ + +LW SG + Sbjct: 204 LELFMMSEFGPGFPFWLPNGMTLRHALDEYYYNAHIKRGYVFTQTPTMLNKELWEVSGHW 263 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 ++Y +E + + +D+ P + ++++ + SYR+LP ++ R E Sbjct: 264 ENY-RENMYTSTIDDREFAIKPMNCPGGMLVYKNGLHSYRDLPIRLAEMGHVHRHEASGA 322 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPI 202 G+ R R F DA+ F + + + ++ I+ GL + R E I Sbjct: 323 LNGLFRVRSFTQDDAHLF-MREDQLQDEIVEILDFINEIYSTFGLSYSIELSTRPEDKYI 381 Query: 203 GGDLSHEFIVLADTGETQV--FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS 260 G I + D E + C +DF I + F Y Sbjct: 382 GD------IDVWDRSEQALKEACMAAGVDFKINEGDGAF----------------YGPKL 419 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG 318 D K+ DSL RV G +LP T+ DGK M Sbjct: 420 DF---KVRDSL---NRVWQCGT-------VQLDMNLPERFDLTYVAEDGKKKRPIMLHRA 466 Query: 319 I-GAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSK 374 I G++ R + +IE G +P +AP +I +I N + H + C+ + + Sbjct: 467 IFGSIERFIGILIEHFAGG----FPLWMAPKQIEIIPVNTEFHMDYANEVCDLLLEK--- 519 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 G D E++G + A PLQ+I+G + + D V ++ Sbjct: 520 -GIRAHVDGRNEKLGYRLREAQKNKIPLQLIIGDQEIEDRSVNVR 563 >gi|146420108|ref|XP_001486012.1| hypothetical protein PGUG_01683 [Meyerozyma guilliermondii ATCC 6260] gi|146389427|gb|EDK37585.1| hypothetical protein PGUG_01683 [Meyerozyma guilliermondii ATCC 6260] Length = 719 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 ++ S G WLP G + + + ++R E + E+ P + ++ LW SG + +Y Sbjct: 326 FFNEMSPGSAFWLPHGTRIYNRLVDLMRSEYIQRDFQEVITPNMYNSKLWETSGHWGNYK 385 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M D + P + IF+S +SYR LP+ + R+E G+ Sbjct: 386 ENMFTF-DVEKDSFGLKPMNCPGHCLIFKSRERSYRELPWRVADFGVIHRNEFSGALSGL 444 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 445 TRVRRFQQDDAHIF 458 >gi|146321639|ref|YP_001201350.1| hypothetical protein SSU98_1792 [Streptococcus suis 98HAH33] gi|145692445|gb|ABP92950.1| SerS [Streptococcus suis 98HAH33] gi|292559062|gb|ADE32063.1| SerS [Streptococcus suis GZ1] Length = 467 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 8/143 (5%) Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + D +G+Y + ++ LAD N + PT E +T+ +R+ I Sbjct: 232 GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYYRNEILE 288 Query: 125 YRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++LP F + FR E R G++R +F + F TPE S KM + Sbjct: 289 EKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-ATPEQSYDELEKMTAN 347 Query: 181 YLRIFHRLGLKSIPMRAESGPIG 203 I +LGL + +G +G Sbjct: 348 AENILQKLGLPYRVLALCTGDMG 370 >gi|302386675|ref|YP_003822497.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1] gi|302197303|gb|ADL04874.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1] Length = 653 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 3/128 (2%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G K + + I +E+ + G + P + DL++ S +D Y + M L Sbjct: 259 QGLPLLMPKGAKIVQTLQRWIEDEEEKRGYMRTKTPLMAKKDLYIISDHWDHYKEGMFVL 318 Query: 97 ADR--NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + +D+ P +++ KSYR+LP + + FR+E G+ R R Sbjct: 319 GNEETDDEVFALRPMTCPFQYYVYKQSQKSYRDLPCRYGETSTLFRNEDSGEMHGLTRVR 378 Query: 154 EFLMKDAY 161 +F + + + Sbjct: 379 QFTISEGH 386 >gi|222480176|ref|YP_002566413.1| threonyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] gi|222453078|gb|ACM57343.1| threonyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 649 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P G+ L ++ E G E+ P + +LW +SG Y++Y +M L Sbjct: 267 GLPLYHPPGKTVLRELSNFANELNRENGYEEVETPHVFRTELWKKSGHYENYKDDMF-LL 325 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D ND+ P + IF SYR+LP +++ +R E R G+ R F Sbjct: 326 DVNDEEYGLKPMNCPGHATIFDQQSWSYRDLPQRYFENGKVYRKEQRGELSGLSRVWSFT 385 Query: 157 MKDAYSF 163 + D + F Sbjct: 386 IDDGHLF 392 >gi|37522455|ref|NP_925832.1| threonyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] gi|73919794|sp|Q7NCU0|SYT_GLOVI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|35213456|dbj|BAC90827.1| threonyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] Length = 627 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 89/423 (21%), Positives = 160/423 (37%), Gaps = 52/423 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ W P G + +R+EQ + G ++ P + DL+ SG + Y +M L Sbjct: 241 GLPLWTPKGALLRYILEEFLRKEQVKRGYQQVVTPHIARVDLFKTSGHWFKYKDDMFPLM 300 Query: 97 ----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + ++ + P + I++S + SYR LP + +R E G+ R Sbjct: 301 ATSEEEGAEEGFVMKPMNCPFHIQIYKSELHSYRELPIRLAEFGTVYRYEQSGELGGLTR 360 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL-----KSIPMRAESGP--IGG 204 R F + D++ F +TPE + K+ +F L L + R + IG Sbjct: 361 VRGFTVDDSHLF-VTPEQLDDEFKKVVDLIQFVFRSLQLGDGFSARLSFRDPTSDKYIGS 419 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 D + E A +Q K F+ + D I +++ +W + Sbjct: 420 DAAWEKAQAAILKASQDLGLKYFVAEGEAAFYGPKLDFIFRDALGREWQLGTVQVDYI-- 477 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 LPE E+ ++ G++ M H GS R Sbjct: 478 ------LPER-------FELEYVAEDGSRRRPVMI----------HRAPFGSL----ERF 510 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +A +IE G +W +AP ++ ++ + DQ A E + RL + D Sbjct: 511 IAILIE-HFAGDFPLW---LAPEQVRILPVT--DQFVGYA-ESVKDRLVSLEMRAEVDAS 563 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL--EEVINYASHRF 442 E++G + + P+ ++VG + V ++ R+ G ++ +L EE I Y R Sbjct: 564 SERLGKKIRNGETAKVPVLLVVGESEANSGTVAVRTRVEGEKDKGTLPVEEAIAYLQERL 623 Query: 443 SNN 445 + Sbjct: 624 AKR 626 >gi|284931606|gb|ADC31544.1| Prolyl-tRNA synthetase [Mycoplasma gallisepticum str. F] Length = 474 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 11/180 (6%) Query: 24 KLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSA-DLWV 81 +++ + +IH + KG S+LP G K + + +E ++ +E+ +P+L S D + Sbjct: 21 EVISKGNLIHYSNIKGFMSFLPNGWKIWQLIKKELTKEFDQRDILELCLPSLISQNDFLL 80 Query: 82 ESGRYDSYGKEMLRLADRNDKA--MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 E + + E+ + +++ I PT E +++R +++YR LP Q F Sbjct: 81 EKKHLEGFAPELFIVTKTSNETEKYILRPTSEIAFCNLWRETLRNYRQLPIKHNQWTSVF 140 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL--GLKSIPMRA 197 R E R +R+ EF + +S T E S N V +++ R + IP+ A Sbjct: 141 RVEKNTR-PFLRNSEFFWHEIHSCFETEEQS----NDFAVDIWKLYQRFIKDILCIPLVA 195 >gi|114600754|ref|XP_001153291.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 1 [Pan troglodytes] Length = 619 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 230 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 289 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 290 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 348 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 349 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 404 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 405 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 441 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 442 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 490 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 491 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 544 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 545 DIDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 601 >gi|297620635|ref|YP_003708772.1| Prolyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] gi|297375936|gb|ADI37766.1| Prolyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] Length = 507 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ D F ++SYR+LP Q R E+RPR +R+ EFL ++ Sbjct: 117 EEPLIVRPTSETIIGDSFSRWVESYRDLPLLINQWANVVRWEMRPRI-FLRTSEFLWQEG 175 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T + +K KM Y Sbjct: 176 HTVHATKQEAKEETLKMLEVY 196 >gi|253752458|ref|YP_003025599.1| seryl-tRNA synthetase [Streptococcus suis SC84] gi|253754284|ref|YP_003027425.1| seryl-tRNA synthetase [Streptococcus suis P1/7] gi|56684577|gb|AAW21989.1| SerS [Streptococcus suis] gi|251816747|emb|CAZ52389.1| seryl-tRNA synthetase [Streptococcus suis SC84] gi|251820530|emb|CAR47285.1| seryl-tRNA synthetase [Streptococcus suis P1/7] gi|319758862|gb|ADV70804.1| hypothetical protein SSUJS14_1746 [Streptococcus suis JS14] Length = 424 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 8/143 (5%) Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + D +G+Y + ++ LAD N + PT E +T+ +R+ I Sbjct: 189 GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYYRNEILE 245 Query: 125 YRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++LP F + FR E R G++R +F + F TPE S KM + Sbjct: 246 EKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-ATPEQSYDELEKMTAN 304 Query: 181 YLRIFHRLGLKSIPMRAESGPIG 203 I +LGL + +G +G Sbjct: 305 AENILQKLGLPYRVLALCTGDMG 327 >gi|13471046|ref|NP_102615.1| threonyl-tRNA synthetase [Mesorhizobium loti MAFF303099] gi|22654133|sp|Q98LR2|SYT_RHILO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|14021790|dbj|BAB48401.1| threonyl-tRNA synthetase [Mesorhizobium loti MAFF303099] Length = 658 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 6/137 (4%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + G+ W G K N+ +R + G E++ P + LW SG + Y Sbjct: 260 QEEGPGVVFWHAKGWKMFQNLVNYMRRRLDEQGYQEVNAPQVLDKSLWETSGHWGWYRDA 319 Query: 93 MLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 M ++ +D+ P + IF+ +KSYR+LP + R E Sbjct: 320 MFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDLPVKLAEFGNVHRYEPSGAL 379 Query: 148 -GVMRSREFLMKDAYSF 163 G+MR R F DA+ F Sbjct: 380 HGLMRVRGFTQDDAHIF 396 >gi|254781004|ref|YP_003065417.1| threonyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] gi|254040681|gb|ACT57477.1| threonyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 652 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 11/183 (6%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 I + G+ W G K + + +R + + E++ P + LW +SG +DSY Sbjct: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316 Query: 92 EMLRLADRND-----KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + +D + P + +F +KSYR LP + +R+E Sbjct: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376 Query: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---I 202 G+MR R F DA+ F T E + K+ + I+ G + I ++ + P + Sbjct: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435 Query: 203 GGD 205 G D Sbjct: 436 GSD 438 >gi|85093975|ref|XP_959801.1| threonyl-tRNA synthetase [Neurospora crassa OR74A] gi|28921255|gb|EAA30565.1| threonyl-tRNA synthetase [Neurospora crassa OR74A] Length = 788 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 17/165 (10%) Query: 15 PRDAEIASHKLMLRTGMIHQH---------------SKGIYSWLPLGQKALDNVNAIIRE 59 P ++A+HK L H S G WLP G + + + I+E Sbjct: 302 PDKKQMAAHKKFLEEAAKRDHRLIGKQQELFYFEECSPGSAMWLPHGMRINNAIMEYIKE 361 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E + G E+ P + + LW +SG Y +M L D + + P + +FR Sbjct: 362 EYWKRGYDEVMTPNMFNVALWEQSGHLAHYKDDMFIL-DVDKEQFGLKPMNCPAHAMMFR 420 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 +S++ LP + R+E G+ R R F DA+ F Sbjct: 421 HRDRSHKELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIF 465 >gi|288940715|ref|YP_003442955.1| threonyl-tRNA synthetase [Allochromatium vinosum DSM 180] gi|288896087|gb|ADC61923.1| threonyl-tRNA synthetase [Allochromatium vinosum DSM 180] Length = 639 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ W G+ +RE+ + G E+ P + LW SG +D + M Sbjct: 262 APGMAFWHAKGRVVYRLAETYMREKLDEYGYQEVETPQVLDRSLWERSGHWDKFAGGMF- 320 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 +D+ P + ++ +KSYR+LP + + R+E G+MR+R Sbjct: 321 TTHLDDRDFAIKPMNCPGHIQLYNQGLKSYRDLPLRLAEFGVVHRNEPSGTLHGLMRARR 380 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 381 FTQDDAHVF 389 >gi|260947818|ref|XP_002618206.1| hypothetical protein CLUG_01665 [Clavispora lusitaniae ATCC 42720] gi|238848078|gb|EEQ37542.1| hypothetical protein CLUG_01665 [Clavispora lusitaniae ATCC 42720] Length = 686 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 72/332 (21%), Positives = 126/332 (37%), Gaps = 64/332 (19%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 D+ + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 282 DEHIAIRPTSETVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEFKHPQPFLRTREFLWQEG 341 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ LT EG+ ++ Y ++ L ++P +V + Sbjct: 342 HTAHLTKEGAATEVEQILDLYRGVYEE--LLAVP----------------VVKGRKTANE 383 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 F D+ T I + ++ T+ + T + K+F+ EN Sbjct: 384 KFAGADYT-------TTCEGFIAATGRGIQGATSHHLGT---NFSKMFNISVEN----PE 429 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 G E +F F + L + RV+ +I + D KG++ Sbjct: 430 GPEKERVFAFQNSWGL------------------------STRVIGVMIMTHSDNKGLVL 465 Query: 341 PDSVAPFKISLINIKAHDQVC---RDA----CEKIYARLSKVGCDVFWDDMGE-QIGSQF 392 P VA ++ ++ + + RDA +K+ L+ G V D G +F Sbjct: 466 PPRVAQNQVVVVPVGLTSKSTPEQRDAVNGGAKKVEDALADAGLRVVGDYRNNYSPGWKF 525 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 A +L G PL+V G K ++ +V R G Sbjct: 526 ADWELKGVPLRVEFGPKDLAAGQVTAVRRDNG 557 >gi|224099691|ref|XP_002311580.1| predicted protein [Populus trichocarpa] gi|222851400|gb|EEE88947.1| predicted protein [Populus trichocarpa] Length = 678 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G + +LP G + + + I++E + G E+ P + + LW SG +Y Sbjct: 297 FCHPLSPGSWFFLPHGTRVYNKLMQFIKDEYRKRGYEEVKSPNIFNMKLWETSGHAANYK 356 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M L N + + P + +F+ ++SYR LP R+E G+ Sbjct: 357 ENMFLLEIENQEFGL-KPMNCPGHCLMFQHRVRSYRELPLRLADFGALHRNEASGALTGL 415 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 416 TRVRRFQQDDAHIF 429 >gi|86151198|ref|ZP_01069413.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|85841545|gb|EAQ58792.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] Length = 602 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 91/448 (20%), Positives = 175/448 (39%), Gaps = 51/448 (11%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD +L L T + G+ WL G + + ++ + Sbjct: 195 KEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRL 253 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L AD W SG Y +Y KE + +++ P + I++S ++ Sbjct: 254 RGYEPVRGPELLKADAWKISGHYANY-KENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVR 312 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM-FV-S 180 SYR+LP F++ + R E G+ R REF DA+ F + + + + FV + Sbjct: 313 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDN 372 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +++F D S+E + T + + + + D Sbjct: 373 LMKLF-------------------DFSYEMEI--STKPEKAIGDDEIWEIATKALKEALD 411 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ K+ D+L R + G I ++LP Sbjct: 412 EQGLKYGIDEGGGAFYGPKIDI---KITDAL-------KRKWQCGTI---QVDFNLPSCF 458 Query: 301 TFKGADG---KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KA 356 + D K V + +G+ ++ G+ +P +AP + ++ I +A Sbjct: 459 KLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGE---FPFFIAPTAVGIVPIGEA 515 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 H ++ I L ++ D + E + + +A+ P+ +++G V+ V Sbjct: 516 HIAYAKE----IQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSV 571 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ R ++++SL+E I + S Sbjct: 572 ALRDRRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|302818920|ref|XP_002991132.1| hypothetical protein SELMODRAFT_132981 [Selaginella moellendorffii] gi|300141063|gb|EFJ07778.1| hypothetical protein SELMODRAFT_132981 [Selaginella moellendorffii] Length = 528 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 5/146 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R ++ G G ++ F +G ++ S+G+ + R+V +I + D KG++ Sbjct: 267 RALQAGTSHNLGQNFARAFETQFTDVNGDLQHIWQTSWGM-STRMVGGIIMTHGDDKGLM 325 Query: 340 WPDSVAPFKISLINI--KAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVA 395 P +AP ++ ++ I K +Q A K+ + + G V D ++ G +F Sbjct: 326 LPPKLAPIQVVIVPIWKKGDEQESVLQAAHKVESLVRAAGIRVKLDTFDQRTPGWKFNHW 385 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHR 421 +L G P+++ +G K V+++ V + R Sbjct: 386 ELKGVPIRIEIGPKDVANNSVVVARR 411 >gi|296194829|ref|XP_002745122.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic [Callithrix jacchus] Length = 723 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 86/417 (20%), Positives = 165/417 (39%), Gaps = 59/417 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y + Sbjct: 335 FHELSPGSCFFLPKGAYIYNALIDFIRSEYRKRGFQEVVTPNIYNSRLWMTSGHWQHYSE 394 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M ++ + P + +F +S+R LP + R+EL G+ Sbjct: 395 NMFSFEVEKEQFAL-KPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLT 453 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSH 208 R R F DA+ F + K + +LR+ + + S + + P GD Sbjct: 454 RVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRMVYSVFGFSFKLNLSTRPEKFLGD--- 508 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDV 262 I + + E Q+ EN SLN E+W A Y D+ Sbjct: 509 --IEVWNQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKIDI 546 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIG 320 ++ D++ + + ++ F +++L TF DG D V + +G Sbjct: 547 ---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TFVSHDGDDKKRPVIVHRAILG 595 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGCD 378 ++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K D Sbjct: 596 SVERMIAILTENYGGK---WPFWLSPRQVMVVPVGPS---CDEYAQKVRQQFHAAKFMAD 649 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 V D G + + A L + ++VG K V I+ R + + ++ E + Sbjct: 650 VDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTVSETV 705 >gi|253756218|ref|YP_003029358.1| seryl-tRNA synthetase [Streptococcus suis BM407] gi|251818682|emb|CAZ56517.1| seryl-tRNA synthetase [Streptococcus suis BM407] Length = 424 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 8/143 (5%) Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + D +G+Y + ++ LAD N + PT E +T+ +R+ I Sbjct: 189 GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYYRNEILE 245 Query: 125 YRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++LP F + FR E R G++R +F + F TPE S KM + Sbjct: 246 EKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-ATPEQSYDELEKMTAN 304 Query: 181 YLRIFHRLGLKSIPMRAESGPIG 203 I +LGL + +G +G Sbjct: 305 AENILQKLGLPYRVLALCTGDMG 327 >gi|108757584|ref|YP_630572.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622] gi|108461464|gb|ABF86649.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622] Length = 400 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 2/138 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W P G + +R+ R G E+ P L + LW SG +D++ + Sbjct: 19 LQEEAPGMVFWHPRGLVLYRLLEEHVRQRMRREGYQEVRTPQLYAQPLWERSGHWDNFRE 78 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M L + + + P ++ + SYR+LP + L R E G+ Sbjct: 79 NMF-LVEDGARHLGVKPVSCPGHIELVQRMAPSYRDLPLRLGEFGLVHRAEPGGALHGLF 137 Query: 151 RSREFLMKDAYSFDLTPE 168 R R+F D + F P+ Sbjct: 138 RLRQFTQDDGHIFCAEPQ 155 Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust. Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 10/130 (7%) Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G++ V+ H G W +AP ++ + ++ + D E+ A+L + GC Sbjct: 278 LGSLERFIGVMLEHHGGALPPW---LAPQQVVVASV---GEGAADYAERFAAKLQEAGCR 331 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 D GE + + A G P V+ G++ V+ V ++ R G + D+ E+ A Sbjct: 332 ASVDRRGESLSRKVLDAHAAGVPWLVVAGAREVAAGNVRLRQR-DGAQRDVPWEDA---A 387 Query: 439 SHRFSNNRPV 448 + ++ RP Sbjct: 388 AELVASCRPA 397 >gi|320583490|gb|EFW97703.1| Mitochondrial threonyl-tRNA synthetase [Pichia angusta DL-1] Length = 427 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 6/139 (4%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI S G +LP G + + + ++ +Q + G E+ P + DLW SG +D+Y Sbjct: 27 MIDASSPGSVFFLPHGTRIFNRLVQFMKIQQEKHGFTEVISPLMYKKDLWETSGHWDNYA 86 Query: 91 KEMLRL---ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++M R+ + N +YG P + IF +S+ LP R+E Sbjct: 87 EDMFRVESNSSSNKLEAVYGLKPMNCPGHCVIFGRFARSHHELPIRLSDWSSLHRNEPSG 146 Query: 146 RF-GVMRSREFLMKDAYSF 163 G+ R R F D + F Sbjct: 147 ALTGLTRVRRFHQDDGHIF 165 >gi|238618767|ref|YP_002913592.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|259516721|sp|C4KKV9|SYT_SULIK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238379836|gb|ACR40924.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.4] Length = 545 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 13/182 (7%) Query: 18 AEIASHKLM---LRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 AE H+L+ L H+ + G+ + P GQ + + A +RE + G E+ Sbjct: 135 AEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNELIAFMREINDSMGYQEVYTSH 194 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFT 131 + D+W SG Y Y +++ D+ YG P + I++S ++YR+LP Sbjct: 195 VFKTDIWKISGHYTLYRDKLIVFNMEGDE---YGVKPMNCPAHILIYKSKPRTYRDLPIR 251 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS-YLRIFHRLG 189 F + +R E + +G++R R F+ D + F E KM +S + ++H+ G Sbjct: 252 FSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIF--LREDQLMEEIKMLISKTVEVWHKFG 309 Query: 190 LK 191 K Sbjct: 310 FK 311 >gi|269468339|gb|EEZ80013.1| threonyl-tRNA synthetase [uncultured SUP05 cluster bacterium] Length = 630 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 14/180 (7%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H KG W L Q + ++ R+ + E+ P L LW +SG +D + Sbjct: 261 GMVFWHEKG---W-TLYQIVEQYMRSVFRDNDYK----EVHTPQLIDRTLWEKSGHWDKF 312 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 G M + N + P + I+ +KSYR+LP + R+E G Sbjct: 313 GDAMFTTSSENRDYAV-KPMNCPAHIQIYNQGLKSYRDLPLRLAEFGSCHRNEPSGTLHG 371 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 +MR R F+ D + F T + + ++ G +++ ++ + P +G D Sbjct: 372 IMRVRNFVQDDGHIF-CTENQIQDEVSTFIDLTFDVYKNFGFENVDIKLSTRPEKRVGSD 430 >gi|223934048|ref|ZP_03626000.1| seryl-tRNA synthetase [Streptococcus suis 89/1591] gi|223897275|gb|EEF63684.1| seryl-tRNA synthetase [Streptococcus suis 89/1591] Length = 424 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 8/130 (6%) Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + D +G+Y + ++ LAD N + PT E +T+ +R+ I Sbjct: 189 GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYYRNEILE 245 Query: 125 YRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++LP F + FR E R G++R +F + F TPE S KM + Sbjct: 246 EKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-ATPEQSYDELEKMTAN 304 Query: 181 YLRIFHRLGL 190 I +LGL Sbjct: 305 AENILQKLGL 314 >gi|167536887|ref|XP_001750114.1| hypothetical protein [Monosiga brevicollis MX1] gi|163771443|gb|EDQ85110.1| predicted protein [Monosiga brevicollis MX1] Length = 550 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G +LP G + + +IRE+ + G E+ P + + +LW SG + Y Sbjct: 206 FFHDLSPGSCFFLPRGARIYRTLMEMIREQYIKRGFSEVVTPNIFNKNLWETSGHWQHYQ 265 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + + + + P + +F +SYR LP F + R+EL G+ Sbjct: 266 ENIFSF-EVEKEIFAMKPMNCPSHCIMFGHRKRSYRELPLRFADFGVLHRNELSGALTGL 324 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 325 TRVRRFQQDDAHIF 338 >gi|212223522|ref|YP_002306758.1| threonyl-tRNA synthetase [Thermococcus onnurineus NA1] gi|229558459|sp|B6YTH4|SYT_THEON RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|212008479|gb|ACJ15861.1| Threonyl-tRNA synthetase [Thermococcus onnurineus NA1] Length = 627 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 71/331 (21%), Positives = 133/331 (40%), Gaps = 50/331 (15%) Query: 117 IFRSHIKSYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSY 174 I + I SYRNLP Y++ + FR E G+ R R F M D ++ + + + Sbjct: 306 IKKDAIISYRNLPLRMYELTRYSFRREKSGELSGLRRLRAFTMPDMHTVARDLKQAMAEF 365 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 K + + + +GL + E + ++DF + Sbjct: 366 KKQYKLSMEVLKGVGLTP----------------------EDYEVAIRFTEDFWN----- 398 Query: 235 ENTDF----DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 EN DF II ++E W + D+L + +S I+V + F Sbjct: 399 ENRDFIVELAKIIGKPVLIEMWKQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERF 458 Query: 291 GTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIE--SSHDGKGI--IWPDSV 344 G T+ DGK+ Y + + GA+ RV+ A++E + KGI ++P + Sbjct: 459 GI--------TYYDEDGKEKYPLILHCSPSGAIERVMYAILEKQAKLQSKGIKPMFPLWL 510 Query: 345 APFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 +P ++ +I + + D + +L V DD +++ + A+ P + Sbjct: 511 SPIQVRVIPV---SEEVLDYALYVAGKLEGAKIRVDVDDTSDRLNKKIRKAEKEWIPYVI 567 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +VG + + ++ R G + +M LE++I Sbjct: 568 VVGRNEKEQNTITVRRRSDGKQGEMQLEDLI 598 >gi|15921207|ref|NP_376876.1| threonyl-tRNA synthetase [Sulfolobus tokodaii str. 7] gi|22654128|sp|Q973C8|SYT_SULTO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|15621992|dbj|BAB65985.1| 540aa long hypothetical threonyl-tRNA synthetase [Sulfolobus tokodaii str. 7] Length = 540 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 3/152 (1%) Query: 46 GQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMI 105 GQ + + E G E+ + + LW SG YD Y +M+ L D+ + Sbjct: 162 GQIIRKELMKFMEEINESMGYQEVFTAEIYRSILWKTSGHYDYYKDKMV-LFKMEDEELG 220 Query: 106 YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFD 164 P + I++S +SY++LP F + L FR E R +G++R R F+ D + F Sbjct: 221 LKPMNCPAHILIYKSKTRSYKDLPIRFSEFGLVFRWEKRGELYGLLRVRGFVQDDGHIF- 279 Query: 165 LTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 LT + K + + + G K +R Sbjct: 280 LTEDQIKDEVKMLVKKTIDVLSIFGFKGDDVR 311 >gi|315604309|ref|ZP_07879375.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] gi|315314015|gb|EFU62066.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] Length = 677 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 102/451 (22%), Positives = 169/451 (37%), Gaps = 77/451 (17%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGM-------IHQHSKGIYSWLPLGQKALDNVNAI 56 SK L QE ++AE H+ R G+ + G+ + P G + + Sbjct: 235 SKEDLVAYQERIKEAERRDHR---RLGVELDLFSFPEEIGPGLVVFHPKGGILRHEIESY 291 Query: 57 IREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML--------RLADRND------- 101 + + R G + P + L+ SG Y M R AD N Sbjct: 292 VTDRHKRAGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLVDEERDADGNVTKAGQEY 351 Query: 102 --KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMK 158 KAM P H IFRS +SYR LP FY++ +R E G+ R R F Sbjct: 352 YLKAM-NCPMHNL----IFRSRGRSYRELPLRFYELGHDYRYEKSGVVHGLTRMRGFTQD 406 Query: 159 DAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV-----L 213 D++++ TPE + +L I GLK + + G +FI Sbjct: 407 DSHTY-CTPEQASQEIRTQIEFFLSILSAFGLKDFYLELSTRDEDGKKKDKFIGSDEDWA 465 Query: 214 ADTGETQVFCSKDFMDF-PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 A T Q C+ +D P P + +S+ ++ D++ Sbjct: 466 AATKALQDACAATGLDLVPDPGGAAFYGPKVSV--------------------QVKDAIG 505 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIES 331 ++S + + F ++ L +A ADG + V + S +G++ V+ Sbjct: 506 RTWQMST----IQYDFNQPERFDLEYTA----ADGTRQRPVMIHSAKLGSVERFIGVLTE 557 Query: 332 SHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + G W ++P ++ LI + +A D D K+ R +V D+ D G++I Sbjct: 558 HYAGAFPAW---LSPVQVRLIPVAEAFDGYVADVAAKLRERGVRVETDLSDDRFGKKI-- 612 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + A D + P +I G + V V + R Sbjct: 613 RNASKDKI--PFTLIAGGEDVEAGAVSFRLR 641 >gi|332821648|ref|XP_003310808.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic [Pan troglodytes] Length = 756 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 367 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 426 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 427 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 485 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 486 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 541 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 542 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 578 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 579 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 627 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 628 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 681 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 682 DIDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 738 >gi|315054053|ref|XP_003176401.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311338247|gb|EFQ97449.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 765 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 10/162 (6%) Query: 10 ILQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +LQE+ + E A + L+ G + S G LP G K + + ++R E + Sbjct: 310 LLQEHLKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRK 369 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + +W +SG + Y +M +L ++ D A+ P + +F Sbjct: 370 RGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKLDVEKRDWAL--KPMNCPGHCIMFGHRE 427 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 +SYR LP + R+E G+ R R+F D + F Sbjct: 428 RSYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIF 469 >gi|239618448|ref|YP_002941770.1| threonyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|259516548|sp|C5CI64|SYT_KOSOT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239507279|gb|ACR80766.1| threonyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 648 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 ++++ G+ + P G L+ + RE ++ G E+ P + + LW SG +D Y ++ Sbjct: 260 YEYAPGMPIYHPKGTIVLNELMKFSREVHSKHGYQEVMTPQIMNDVLWHRSGHWDHY-RD 318 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + +++++ P + I++S SYR+LP ++ R E G++R Sbjct: 319 NMYFTEKDEQQYAIKPMNCPGHILIYKSRAMSYRDLPLKLFEFGKVHRYERSGVLHGLLR 378 Query: 152 SREFLMKDAYSF 163 R F+ DA+ F Sbjct: 379 VRGFIQDDAHIF 390 >gi|158340035|ref|YP_001521204.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017] gi|158310276|gb|ABW31891.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017] Length = 439 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 16/175 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLR-TGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + F ++ + + ++A H+ + R + H +HS G+ W P G + ++ +R+ Sbjct: 18 RVFYYLITQTTGETKMADHRELARDMDLFHFEEHSPGMVFWHPQGLRLFRSIEDFMRQVY 77 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL----ADRNDKAMI--------YGPT 109 G E+ P + LW S ++ + + M + AD +D++ + P Sbjct: 78 QGHGFEEVRSPIALNRSLWERSRHWEKFRQGMFVVGSVEADIDDESALSVISPDYALKPM 137 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 I++S +SYR P + + R+EL G MR R+F+ DA+ F Sbjct: 138 SCPAHIAIYQSRKRSYRENPMRLMEFGICHRNELSGTLSGCMRLRQFVQDDAHIF 192 >gi|47479652|gb|AAH69346.1| TARSL2 protein [Homo sapiens] gi|47480952|gb|AAH69811.1| TARSL2 protein [Homo sapiens] Length = 466 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y Sbjct: 77 FFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYS 136 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M D P + +F +S+R +P F + R+EL G+ Sbjct: 137 ENMFTFEIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGL 195 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 196 TRVRRFQQDDAHIF 209 >gi|304403794|ref|ZP_07385456.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304346772|gb|EFM12604.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 637 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 85/396 (21%), Positives = 145/396 (36%), Gaps = 45/396 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M + + G+ +LP G + + + RE Q E+ P + + +W +SG +D Y Sbjct: 257 MFSEEAPGMPFYLPKGMAIRNELESFAREIQRLRAYAEVRTPLMMNNRIWEQSGHWDHY- 315 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 K+ + ++ P + I+++ SYR LP + R E G+ Sbjct: 316 KDNMYFTQVDETKFALKPMNCPGHMLIYKNSRHSYRELPIRLSEFGQVHRHEFSGALSGM 375 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F DA+ +FV +I +GL + G I Sbjct: 376 MRVRTFCQDDAH---------------LFVLPSQIEEEIGL----VIELIGHIYDVFGFA 416 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + + T ++ D S + D +I E A Y D H + D Sbjct: 417 YKIELSTRPDDYMGAEALWDQAEQSLQSVLDARGIAYTINEGDGAFYGPKIDFH---ILD 473 Query: 270 SLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVV 325 +L R + G I F K+ L T+ G D H V + G++ Sbjct: 474 AL-------QRSWQCGTIQLDFQMPEKFDL----TYIGEDNLKHRPVVIHRAVYGSIDRF 522 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP + L+ + DQ DA + +L + G DD Sbjct: 523 IGILTEHYAGAFPLW---LAPVQAKLLPVS--DQYLDDAY-AVKKQLEEAGIRAEVDDRN 576 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++G + A L P +I+G V ++ R Sbjct: 577 EKLGYKIREAQLEKTPYMLILGENERGSGSVSVRKR 612 >gi|114600748|ref|XP_001153418.1| PREDICTED: threonyl-tRNA synthetase isoform 2 [Pan troglodytes] gi|114600750|ref|XP_001153486.1| PREDICTED: threonyl-tRNA synthetase isoform 3 [Pan troglodytes] gi|114600752|ref|XP_001153550.1| PREDICTED: threonyl-tRNA synthetase isoform 4 [Pan troglodytes] Length = 664 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 275 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 334 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 335 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 393 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 394 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 449 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 450 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 486 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 487 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 535 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 536 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 589 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 590 DIDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 646 >gi|54020489|ref|YP_115908.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae 232] gi|81823524|sp|Q600Q7|SYP_MYCH2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|53987662|gb|AAV27863.1| prolyl aminoacyl-tRNA synthetase [Mycoplasma hyopneumoniae 232] Length = 479 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/143 (19%), Positives = 66/143 (46%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R ++ + G ++ +K + K S+G+ + R++ A++ D G+I Sbjct: 222 RALQSATAHFLGQNFAKNFEIFYKNKENKSQIPFQTSWGL-STRLIGAIVMVHSDDNGLI 280 Query: 340 WPDSVAPFKISLIN-IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +P +AP ++ ++ +Q + +KI L DD +QIG + +++ Sbjct: 281 FPPKIAPIQVDILEFFSKKNQEVKIFAKKIAKILKNAKISYKIDDTDQQIGYKINNSEVH 340 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P+++ +G V ++++ + R Sbjct: 341 GAPIRIEIGPNEVKNNQICLVRR 363 >gi|284031321|ref|YP_003381252.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836] gi|283810614|gb|ADB32453.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836] Length = 417 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 87/406 (21%), Positives = 166/406 (40%), Gaps = 69/406 (16%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ LP G + + + E + R+G + P L +L+ SG + Y +M Sbjct: 23 GLPYLLPAGAAIRQALESYVAELERRSGYQHVYSPVLGKRELYELSGHWSHYSDDMYPPM 82 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ ++ P+ I+RS SYR LP + ++ +R EL G+ R R Sbjct: 83 KVGEEEVVLRPSLCPHHALIYRSRAHSYRELPVRYAELGGMYRSELSGVLGGLTRVRAIQ 142 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS----IPMRAESGPIGGDLSHEFIV 212 + D + F + + + + + LR + LGL+ + + A I GD + +++ Sbjct: 143 LNDGHIFCTLDQVADEARAALDL-ILRAYGDLGLRPARFLLSLPAADARI-GDPASKYVG 200 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP-----YAATSDVHNEKL 267 A++ + ++ +D + V+ AP Y DV ++ Sbjct: 201 DAESWDRSAALLREVLD----------------EAGVQYEEAPGEAAFYGPKIDV---QI 241 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVV 325 D+ +S I+ F+ ++ L + GADG H V + IG++ RV+ Sbjct: 242 ADAAGRESTLSTIQID----FHQPARFEL----DYIGADGNKHRPVMVHRAIIGSLERVI 293 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A +IE H G P +AP ++ ++ I DA EK A +++ D Sbjct: 294 AQLIE-LHGGA---LPGWLAPVQLVVLPIS-------DAEEKYAAEITRRAVD------- 335 Query: 386 EQIGSQFAVAD--LLG--------FPLQVIVGSKFVSDSKVEIKHR 421 + ++ A AD LG P Q ++G++ + ++ ++ R Sbjct: 336 RGLRAELAHADEGTLGARIRENRLVPYQAVIGARELEAGQLAVRDR 381 >gi|124804231|ref|XP_001347941.1| threonine -- tRNA ligase, putative [Plasmodium falciparum 3D7] gi|23496195|gb|AAN35854.1|AE014840_2 threonine -- tRNA ligase, putative [Plasmodium falciparum 3D7] Length = 1013 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G K + + IR+E E+ P + S DLW SG Y +Y K+ + Sbjct: 548 SPGSCFWLPHGSKIYNKLIEFIRKEYRIRKYEEVISPNVFSCDLWKTSGHYQNY-KDCMF 606 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L + +K P + +F+ SYR+LP + R+E+ G+ R R Sbjct: 607 LFNVENKEWGMKPMNCPGHCLMFKQLNVSYRSLPVRLADFGVLHRNEISGSLSGLTRVRR 666 Query: 155 FLMKDAYSF 163 F D++ F Sbjct: 667 FQQDDSHIF 675 >gi|325478873|gb|EGC81983.1| threonine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13] Length = 640 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 90/412 (21%), Positives = 158/412 (38%), Gaps = 45/412 (10%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ G + P G ++ + + N G E+ P + + LW SG +D Y KE Sbjct: 257 HEEGPGFPFFHPNGMILMNELLGWWTDVLNENGYGEIKTPLILNEALWHRSGHWDHY-KE 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + + + +A P + + ++ SYR+LP + R EL G+ R Sbjct: 316 NMYFTEIDGEAYAVKPMNCPGSVLTYAANQHSYRDLPIRLAEYGQVHRHELSGTLHGLFR 375 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEF 210 R F DA+ + TP K +M ++ G K +I + GD+ Sbjct: 376 VRTFTQDDAHVY-CTPNQIKEEVYRMIDLADLLYSTFGFKYTIELSTRPDDFMGDIKD-- 432 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D E Q+ K + I E D A Y D H L D+ Sbjct: 433 ---WDFAEEQL--KKALEERGIEYEINPGD------------GAFYGPKIDFH---LLDA 472 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMS--ATFKGADG-KDHYVQMGSYGIGAMRVVAA 327 + R + G I + LP + T+ +G K V + +G++ Sbjct: 473 -------AKREWQCGTI---QLDFQLPQNFDLTYIDENGEKQRPVMLHRALLGSIERFIG 522 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 V+ G+ +W + P ++ +I + D+ D E++ ++ + G V D E Sbjct: 523 VLTEHFAGRFPLW---LNPQQVEIIPVS--DKFI-DYAEELKQKIKEAGFRVNIDYRNEG 576 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 +G + A L+ ++VG K + K+ +++R D+SL+E I S Sbjct: 577 VGYKIRQAQLMRTNYMLVVGEKEETSGKLTVRNRDGEETPDVSLDEFIEKIS 628 >gi|284931186|gb|ADC31124.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. F] Length = 573 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 95/430 (22%), Positives = 162/430 (37%), Gaps = 96/430 (22%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP GQ + + Q + G + ++ P L + DL+ +SG Y+ Y K+M L Sbjct: 194 GMPIWLPNGQIVRQLIGDYVHSVQKKFGFMAVNTPILGNVDLYKKSGHYNHYAKDMFPEL 253 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF-RDELRPRF------ 147 L D DK M+ T H Y N P +Y + ++ D L R+ Sbjct: 254 ALLD-GDKMMLRPMTCPH--------HCLVYLNKPRNYYDLPMRLSEDALLHRYEASGGL 304 Query: 148 -GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV------SYLRIFHRLGL---------- 190 G+ R R + D + F + N V ++ FHR+ L Sbjct: 305 TGLERVRAMTLLDNHIFCRLDQIKTEILNAYQVIKEVIGTFNLKFHRIDLSLHDPNDKQS 364 Query: 191 ----KSIPMRAESGPIGG--DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + R+E+ DL E+ GE + K +DF + T + II+ Sbjct: 365 FIDNEQMWARSENQLEDALKDLGLEYT--KQVGEAAFYGPK--IDFQV---KTALNKIIT 417 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 +++I ++ P D+ + E G I + G Sbjct: 418 VSTIQLDFSLPSEEKFDI-----------KYKTKDNTYEQGVIIHLGI------------ 454 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCR 362 +G+Y R VA ++E + G +W +AP + +I N H + C Sbjct: 455 ---------IGTYE----RFVATLLEQTK-GALDLW---LAPKQAVIIPVNNSVHLEGCN 497 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 EK+ A+ +V D E++ + + P+Q+IVG + + + I +RL Sbjct: 498 QLLEKLLAKDLRVTV----DSRDERLNKKIRDHQVNKIPVQIIVGDNELKNPDL-ITYRL 552 Query: 423 TGIREDMSLE 432 G + LE Sbjct: 553 YGQEDSNQLE 562 >gi|315123806|ref|YP_004065810.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017528|gb|ADT65621.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 457 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 4/161 (2%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD +L L T + G+ WL G + + ++ + Sbjct: 50 KEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRL 108 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L AD W SG Y +Y KE + +++ P + I++S ++ Sbjct: 109 RGYEPVRGPELLKADAWKISGHYANY-KENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVR 167 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP F++ + R E G+ R REF DA+ F Sbjct: 168 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIF 208 >gi|290475179|ref|YP_003468065.1| putative Proline--tRNA ligase [Xenorhabdus bovienii SS-2004] gi|289174498|emb|CBJ81292.1| putative Proline--tRNA ligase [Xenorhabdus bovienii SS-2004] Length = 383 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 12/151 (7%) Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD- 358 A + ++ Q +YG+G R+ +++ D KG P V PF I++I ++ D Sbjct: 238 ARYCSNSNRNMNAQFVTYGLGLQRLFFVILDCYRDNKGFNLPKPVRPFDIAIIPLRDEDI 297 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + + ++ D D Q+ + AD LG P ++ F+S+ +V + Sbjct: 298 SRCLEFANCLQIPPDRMLID---DRCKTQVFEKERFADYLGIPQKL-----FISNQEVFV 349 Query: 419 KHRLTG--IREDMSLEEVINYASHRFSNNRP 447 K+R TG ++E L + I S F N +P Sbjct: 350 KNRDTGTFLKEVFQLSD-IKKESCSFFNIQP 379 >gi|83645563|ref|YP_433998.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396] gi|83633606|gb|ABC29573.1| Threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396] Length = 415 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 2/128 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + V IR E++ P +LW SG ++ Y +M A Sbjct: 22 GMAFWHPRGWRMFRTVKNHIRAAYEAESFQEVATPQFLKRELWETSGHWEKYADDMFVGA 81 Query: 98 DRNDKA-MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 ++ P +++ ++SY++LP ++ L R+E G+MR R+F Sbjct: 82 GFGEEPEYALKPMSCPAHILLYKRGVRSYKSLPLRLFEFGLVHRNERSGALNGLMRLRQF 141 Query: 156 LMKDAYSF 163 DA+ F Sbjct: 142 TQDDAHVF 149 >gi|209882409|ref|XP_002142641.1| prolyl-tRNA synthetase family protein [Cryptosporidium muris RN66] gi|209558247|gb|EEA08292.1| prolyl-tRNA synthetase family protein [Cryptosporidium muris RN66] Length = 687 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 67/328 (20%), Positives = 121/328 (36%), Gaps = 63/328 (19%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ + I+S+R+LP Q R E + +R+REFL ++ ++ T Sbjct: 295 PTSETIIHPHYAKWIRSHRDLPLKLNQWTSAVRWEFKQPTPFIRTREFLWQEGHTAHATN 354 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E + + Y I+ +D Sbjct: 355 EEATEMVRTILDDYADIY---------------------------------------QDL 375 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + PI I + S E+ +A ++ + F +PEN R I+ Sbjct: 376 LAVPI---------IKGIKSESEK----FAGANETMTIEGF--IPEN----GRAIQAATS 416 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 G +S F+ G +V S+G+ R + +I + D GII P VAP Sbjct: 417 HNLGQNFSSMFGIEFEDEKGTKQFVYQTSWGL-TTRSIGVMIMTHGDNNGIILPPKVAPI 475 Query: 348 KISLINIKAHDQVCRDA---CEKIYARLSKVGCDVFWDDMGEQI-GSQFAVADLLGFPLQ 403 ++ +I I + + CE++ L + G V DD G ++ ++ G ++ Sbjct: 476 QVVIIPIVFKSSITEEQKIMCEEVEKLLKEEGIRVHIDDRPNYTPGWKYNHWEVKGVCIR 535 Query: 404 VIVGSKFVSDSKVEIKHRLTGIREDMSL 431 +G K + V I R ++D+ + Sbjct: 536 AEIGPKDIESKSVRIVIRDNRAKKDIPI 563 >gi|62320472|dbj|BAD94986.1| putative protein [Arabidopsis thaliana] Length = 426 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 83/408 (20%), Positives = 152/408 (37%), Gaps = 52/408 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + ++ G + P + ADLW SG D Y + M Sbjct: 50 GLVFWHPKGAIVRNIIEESWKKMHVEHGYDLIYTPHVAKADLWKISGHLDFYRENMYDQM 109 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + D+ P + +++ +SYR+LP ++ +R EL G+ R R F Sbjct: 110 EIEDELYQLRPMNCPYHILLYQRKRQSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFT 169 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ F L + K + I R G + + P +GGD Sbjct: 170 QDDAHIFCLEDQ-IKDEIRGVLDLTEEILSRFGFNKYEVNLSTRPEKSVGGD-------- 220 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D E +D +D S D E A Y D+ K+ D+L Sbjct: 221 -DIWEKATCALRDALDDRGWSYEVD-----------EGGGAFYGPKIDL---KIEDALGR 265 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD---GKDHYVQMGSYGIGAMRVVAAVIE 330 + S ++ ++LP D K + + +G++ V+ Sbjct: 266 KWQCSTIQVD----------FNLPQRFDITYVDTNSDKKRPIMIHRAVLGSLERFFGVLI 315 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKVGCDVFWDDM-GEQI 388 + G +W ++P ++ ++ + + + C++ +K+ A C V + GE++ Sbjct: 316 EHYAGDFPLW---LSPVQVRVLPVTDNQLEFCKEVSKKLRA------CGVRAELCHGERL 366 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A+ PL +VG K V V ++ R G + ++++IN Sbjct: 367 PKLIRNAETQKIPLMAVVGPKEVETGTVTVRSRFGGELGTIPVDDLIN 414 >gi|50959620|gb|AAH74887.1| TARSL2 protein [Homo sapiens] Length = 441 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y Sbjct: 52 FFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYS 111 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M D + P + +F +S+R +P F + R+EL G+ Sbjct: 112 ENMFTFEIEKDTFAL-KPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGL 170 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 171 TRVRRFQQDDAHIF 184 >gi|325336816|gb|ADZ13090.1| Threonyl-tRNA synthetase [Riemerella anatipestifer RA-GD] Length = 591 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 4/157 (2%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-- 95 G+ WLP G + + + E Q + G + P + + +L+ SG Y+ YG + + Sbjct: 260 GLPLWLPKGAALRKKLESFLSEAQRKGGYEFVMTPHIGNIELYKTSGHYEKYGADSFQPI 319 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + P + +++++ SY++LP + + +R E G+ R R Sbjct: 320 KTPHVGEEFLLKPMNCPHHCEVYKAQQWSYKDLPKRYAEFGTVYRYEQSGELHGLTRVRG 379 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 F DA+ F TP+ + K+ L +F LG + Sbjct: 380 FTQDDAHLF-CTPDQLLEEFEKVIDLVLYVFKSLGFE 415 >gi|303390083|ref|XP_003073273.1| threonyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506] gi|303302418|gb|ADM11913.1| threonyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506] Length = 646 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 4/131 (3%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 ++S G +LP G + + +REE + G E+ P + LW ESG +Y + M Sbjct: 256 KYSPGSCFFLPNGAIMYNTLIEFLREEYRKRGFKEVITPNIFCTKLWEESGHLQNYKENM 315 Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 + N P + +F+ S+R+LP + R+EL G+ R Sbjct: 316 FLIEGDN---FALKPMNCPGHCVMFKHQDHSFRDLPLRLADFGVLHRNELSGTLTGLTRV 372 Query: 153 REFLMKDAYSF 163 R F DA+ F Sbjct: 373 RRFQQDDAHIF 383 >gi|55741823|ref|NP_001006977.1| threonyl-tRNA synthetase, cytoplasmic [Rattus norvegicus] gi|59896667|sp|Q5XHY5|SYTC_RAT RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|53734298|gb|AAH83914.1| Threonyl-tRNA synthetase [Rattus norvegicus] Length = 695 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 84/416 (20%), Positives = 162/416 (38%), Gaps = 57/416 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y + Sbjct: 307 FHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSE 366 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M ++ + P + +F +S+R LP + R+EL G+ Sbjct: 367 NMFSFEVEKEQFAL-KPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLT 425 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSH 208 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 426 RVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD--- 480 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDV 262 I + + E Q+ EN SLN E+W A Y D+ Sbjct: 481 --IEIWNQAEKQL-------------EN-------SLNEFGEKWELNPGDGAFYGPKIDI 518 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIG 320 ++ D++ + + ++ F +++L T+ DG D V + +G Sbjct: 519 ---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAILG 567 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ + A++ ++ GK WP ++P ++ ++ + C + +K+ V Sbjct: 568 SVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQEFHDAKFMVD 621 Query: 381 WD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + ++VG K + V I+ R + + ++ E + Sbjct: 622 IDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVGETV 677 >gi|71893734|ref|YP_279180.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae J] gi|114152216|sp|Q4A9V2|SYP_MYCHJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71851861|gb|AAZ44469.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae J] Length = 479 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/143 (19%), Positives = 66/143 (46%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R ++ + G ++ +K + K S+G+ + R++ A++ D G+I Sbjct: 222 RALQSATAHFLGQNFAKNFEIFYKNKENKSQIPFQTSWGL-STRLIGAIVMVHSDDNGLI 280 Query: 340 WPDSVAPFKISLIN-IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +P +AP ++ ++ +Q + +KI L DD +QIG + +++ Sbjct: 281 FPPKIAPIQVDILEFFSKKNQEVKIFAKKIAKILKNAKISYKIDDTDQQIGYKINNSEVH 340 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P+++ +G V ++++ + R Sbjct: 341 GAPIRIEIGPNEVKNNQICLVRR 363 >gi|328773873|gb|EGF83910.1| hypothetical protein BATDEDRAFT_18299 [Batrachochytrium dendrobatidis JAM81] Length = 706 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G +LP G + + + + R E + G E+ P + + LW SG + +Y ++M Sbjct: 320 SPGSAFFLPHGTRIYNTLIDLQRSEYRKRGFHEVVTPNMYNTKLWERSGHWANYHEDMFA 379 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L D + P + IF++ +SYR LP + R+E G+ R R Sbjct: 380 L-DVEKEKFALKPMNCPGHCLIFKNRDRSYRELPLRLADFGVLHRNEASGALSGLTRVRR 438 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 439 FQQDDAHIF 447 >gi|194374367|dbj|BAG57079.1| unnamed protein product [Homo sapiens] Length = 756 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 367 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 426 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 427 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 485 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 486 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 541 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 542 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 578 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 579 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 627 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 628 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 681 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 682 DIDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 738 >gi|283955645|ref|ZP_06373138.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] gi|283792870|gb|EFC31646.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] Length = 602 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 91/448 (20%), Positives = 175/448 (39%), Gaps = 51/448 (11%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD +L L T + G+ WL G + + ++ + Sbjct: 195 KEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRL 253 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L AD W SG Y +Y KE + +++ P + I++S ++ Sbjct: 254 RGYEPVRGPELLKADAWKISGHYANY-KENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVR 312 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM-FV-S 180 SYR+LP F++ + R E G+ R REF DA+ F + + + + FV + Sbjct: 313 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDN 372 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +++F D S+E + T + + + + D Sbjct: 373 LMKLF-------------------DFSYEMEI--STKPEKAIGDDEIWEIATKALKEALD 411 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ K+ D+L R + G I ++LP Sbjct: 412 EQGLKYGIDEGGGAFYGPKIDI---KITDAL-------KRKWQCGTI---QVDFNLPSRF 458 Query: 301 TFKGADG---KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KA 356 + D K V + +G+ ++ G+ +P +AP + ++ I +A Sbjct: 459 KLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGE---FPFFIAPTAVGIVPIGEA 515 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 H ++ I L ++ D + E + + +A+ P+ +++G V+ V Sbjct: 516 HIAYAKE----IQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSV 571 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ R ++++SL+E I + S Sbjct: 572 ALRDRRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|117923678|ref|YP_864295.1| threonyl-tRNA synthetase [Magnetococcus sp. MC-1] gi|259516564|sp|A0L4J6|SYT_MAGSM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|117607434|gb|ABK42889.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Magnetococcus sp. MC-1] Length = 648 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 79/389 (20%), Positives = 142/389 (36%), Gaps = 43/389 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + ++ G + P + + LW SG D Y M Sbjct: 263 GLVFWHPRGSRIRRVIEDFWKDRHVEAGYEFLYTPHIANRQLWNTSGHTDFYSDSMFSPM 322 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +++A P + I++ SYR LPF + ++ +R E+ G+ R R F Sbjct: 323 EVDEQAYQIRPMNCPFHILIYKDRRHSYRELPFRWGELGTVYRYEMSGALHGLFRVRGFT 382 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F T + + ++ L I G + + P S A Sbjct: 383 QDDAHIF-CTEQQIEEEIQRILDLTLDILRTYGFSDFEINLSTRPEKSVGSAAIWDKATE 441 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENK 275 + S+D L+ +V E A Y DV K+ DS+ Sbjct: 442 ALRRAIVSRD------------------LSYVVDEGGGAFYGPKIDV---KITDSIGRKW 480 Query: 276 RVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESS 332 + S ++ ++LP + G DG+ H + + +G++ ++ Sbjct: 481 QCSTVQLD----------FNLPERFDMGYIGEDGESHRPIMIHRALMGSLERFFGILVEH 530 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 + G +W +AP + + +I E + A L K G V D E++G + Sbjct: 531 YAGWFPMW---LAPVQAVVCSITDAQHAY---AETVLAALKKAGLRVEIDLRNEKVGYKI 584 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 L P ++VG K + V ++ R Sbjct: 585 REHTLKRVPYLLVVGDKEREEGTVNVRLR 613 >gi|322373920|ref|ZP_08048455.1| serine--tRNA ligase [Streptococcus sp. C150] gi|321277292|gb|EFX54362.1| serine--tRNA ligase [Streptococcus sp. C150] Length = 425 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G EM P + Sbjct: 154 RGAKVTGSRFLFYKGLGAKLERAIYNFM------LD--------EHAKEGYTEMITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L D D +I PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFEL-DGTDYVLI--PTAEVPLTNYYRGEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM V+ I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPESSYDELEKMVVNAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|193788250|dbj|BAG53144.1| unnamed protein product [Homo sapiens] Length = 619 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 85/418 (20%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 230 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 289 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 290 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 348 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 349 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 404 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 405 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 441 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 442 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 490 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 491 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 544 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K + I+ R + + ++ E I Sbjct: 545 DIDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTINIRTRDNKVHGERTISETI 601 >gi|88597312|ref|ZP_01100547.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|218561885|ref|YP_002343664.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|73919778|sp|Q9PIS3|SYT_CAMJE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|88190373|gb|EAQ94347.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|112359591|emb|CAL34375.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925497|gb|ADC27849.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902] gi|315928137|gb|EFV07455.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 602 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 91/448 (20%), Positives = 175/448 (39%), Gaps = 51/448 (11%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD +L L T + G+ WL G + + ++ + Sbjct: 195 KEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRL 253 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L AD W SG Y +Y KE + +++ P + I++S ++ Sbjct: 254 RGYEPVRGPELLKADAWKISGHYANY-KENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVR 312 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM-FV-S 180 SYR+LP F++ + R E G+ R REF DA+ F + + + + FV + Sbjct: 313 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDN 372 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +++F D S+E + T + + + + D Sbjct: 373 LMKLF-------------------DFSYEMEI--STKPEKAIGDDEIWEIATKALKEALD 411 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ K+ D+L R + G I ++LP Sbjct: 412 EQGLKYGIDEGGGAFYGPKIDI---KITDAL-------KRKWQCGTI---QVDFNLPSRF 458 Query: 301 TFKGADG---KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KA 356 + D K V + +G+ ++ G+ +P +AP + ++ I +A Sbjct: 459 KLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGE---FPFFIAPTAVGIVPIGEA 515 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 H ++ I L ++ D + E + + +A+ P+ +++G V+ V Sbjct: 516 HIAYAKE----IQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSV 571 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ R ++++SL+E I + S Sbjct: 572 ALRDRRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|224090286|ref|XP_002193839.1| PREDICTED: threonyl-tRNA synthetase [Taeniopygia guttata] Length = 711 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 83/415 (20%), Positives = 162/415 (39%), Gaps = 57/415 (13%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 324 HELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNVFNSKLWMTSGHWQHYSDN 383 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + +F +S+R LP + R+EL G+ R Sbjct: 384 MFSF-EVEKEIFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTR 442 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--GDLSHE 209 R F DA+ F + + K + +LR + + S + + P GD Sbjct: 443 VRRFQQDDAHIFCAMEQIEEEI--KSCLGFLRTVYDVFGFSFKLNLSTRPEKYLGD---- 496 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDVH 263 I + + E Q+ EN SLN+ E+W A Y D+ Sbjct: 497 -IEVWNQAEKQL-------------EN-------SLNAFGEKWELNPGDGAFYGPKIDI- 534 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGA 321 ++ D++ + + ++ F +++L TF DG D V + +G+ Sbjct: 535 --QIKDAIGRYHQCATIQLD----FQLPVRFNL----TFVSHDGNDKTRPVIIHRAILGS 584 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + + A++ ++ GK WP ++P ++ ++ + C + +K+ G Sbjct: 585 VERMIAILTENYGGK---WPLWLSPQQVMVVPVGP---ACDEYAQKVRQHFHDAGFMADV 638 Query: 382 D-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A + + ++VG K + V I+ R + + ++ + + Sbjct: 639 DVDPGCTLNKKIRNAQIAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTIADTV 693 >gi|297613111|ref|NP_001066707.2| Os12g0443700 [Oryza sativa Japonica Group] gi|77554943|gb|ABA97739.1| Bifunctional aminoacyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica Group] gi|215697485|dbj|BAG91479.1| unnamed protein product [Oryza sativa Japonica Group] gi|215740854|dbj|BAG97010.1| unnamed protein product [Oryza sativa Japonica Group] gi|218186797|gb|EEC69224.1| hypothetical protein OsI_38226 [Oryza sativa Indica Group] gi|222617028|gb|EEE53160.1| hypothetical protein OsJ_35987 [Oryza sativa Japonica Group] gi|255670276|dbj|BAF29726.2| Os12g0443700 [Oryza sativa Japonica Group] Length = 510 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 5/162 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RG++ G ++ TF+ G V S+ R + ++ + D KG Sbjct: 245 TGRGVQGATSHCLGQNFAKMFDITFENDKGSRSMVWQNSWAY-TTRSIGVMVMTHGDDKG 303 Query: 338 IIWPDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFA 393 ++ P VAP ++ +I + D + C+K L K G D G +++ Sbjct: 304 LVLPPRVAPLQVIVIPVPYKDVDTTAIVNECKKTVETLEKAGIRADLDTRENYSPGWKYS 363 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++ G PL++ +G K +++++ + R G + D+ +++ Sbjct: 364 HWEMKGVPLRIEIGPKDMANNQARVVRRDNGAKADIPTADLV 405 Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 37/81 (45%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM F I+S+R+LP Q R E +RSREFL ++ ++ T Sbjct: 133 PTSETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATK 192 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 E + ++ Y RI+ Sbjct: 193 EEADEEVLQILELYRRIYEEF 213 >gi|149499809|ref|XP_001513531.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2, partial [Ornithorhynchus anatinus] Length = 677 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 79/407 (19%), Positives = 163/407 (40%), Gaps = 37/407 (9%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y Sbjct: 288 FFHDLSPGSCFFLPRGAFLYNTLLDFIREEYHKRNFTEVVSPNVYNSKLWETSGHWQHYS 347 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M D + P + +F +S+R +P + R+EL G+ Sbjct: 348 ENMFSF-DVEKETFALKPMNCPGHCLMFAHRPRSWREMPIRLADFGVLHRNELSGTLSGL 406 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 R R F DA+ F + + + K + +L+ + + S + + P Sbjct: 407 TRVRRFQQDDAHIFCMMEQIEEEM--KGCLQFLQSVYSVFGFSFQLNLSTRP------EN 458 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 F+ GE + + D + + + +F + LN A Y D+ K+ D Sbjct: 459 FL-----GEIETW---DQAEKQLQNSLKEFGEPWKLNPGD---GAFYGPKIDI---KIKD 504 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 ++ + + ++ F +++L + K +D K V + +G++ + A++ Sbjct: 505 AIGRYHQCATIQLD----FQLPIRFNLTYVS--KESDDKKRPVIIHRAILGSVERMIAIL 558 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQI 388 ++ GK WP ++P ++ +I + C + ++I + + G D D + Sbjct: 559 SENYGGK---WPFWLSPRQVMVIPVGP---TCEEYAQQIRSEFFEAGFMADVDLDQSSTL 612 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + A L + ++VG K ++ V ++ R I ++S+ I Sbjct: 613 NKKIRNAQLAQYNFILVVGEKEKGNNAVNVRTRDNKIHGEISVNSAI 659 >gi|22325483|ref|NP_671778.1| EMB2761 (EMBRYO DEFECTIVE 2761); ATP binding / aminoacyl-tRNA ligase/ ligase, forming aminoacyl-tRNA and related compounds / nucleotide binding / threonine-tRNA ligase [Arabidopsis thaliana] gi|330250779|gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] Length = 650 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 83/408 (20%), Positives = 152/408 (37%), Gaps = 52/408 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + ++ G + P + ADLW SG D Y + M Sbjct: 274 GLVFWHPKGAIVRNIIEESWKKMHVEHGYDLIYTPHVAKADLWKISGHLDFYRENMYDQM 333 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + D+ P + +++ +SYR+LP ++ +R EL G+ R R F Sbjct: 334 EIEDELYQLRPMNCPYHILLYQRKRQSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFT 393 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ F L + K + I R G + + P +GGD Sbjct: 394 QDDAHIFCLEDQ-IKDEIRGVLDLTEEILSRFGFNKYEVNLSTRPEKSVGGD-------- 444 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D E +D +D S D E A Y D+ K+ D+L Sbjct: 445 -DIWEKATCALRDALDDKGWSYEVD-----------EGGGAFYGPKIDL---KIEDALGR 489 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD---GKDHYVQMGSYGIGAMRVVAAVIE 330 + S ++ ++LP D K + + +G++ V+ Sbjct: 490 KWQCSTIQVD----------FNLPQRFDITYVDTNSDKKRPIMIHRAVLGSLERFFGVLI 539 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKVGCDVFWDDM-GEQI 388 + G +W ++P ++ ++ + + + C++ +K+ A C V + GE++ Sbjct: 540 EHYAGDFPLW---LSPVQVRVLPVTDNQLEFCKEVSKKLRA------CGVRAELCHGERL 590 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A+ PL +VG K V V ++ R G + ++++IN Sbjct: 591 PKLIRNAETQKIPLMAVVGPKEVETGTVTVRSRFGGELGTIPVDDLIN 638 >gi|256384016|gb|ACU78586.1| proline--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|256384848|gb|ACU79417.1| proline--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455440|gb|ADH21675.1| proline--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 474 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 73/143 (51%), Gaps = 4/143 (2%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G +F ++ F+ + K + S+G+ + R++ A+I + D G+ Sbjct: 222 GQALQCGTSHFFADNFTKVYDIKFQNKENKLEHAYSTSWGV-STRLIGALIMTHSDDNGL 280 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P ++P +I +I IK +Q+ E I +LS DV D+ + G + + A++ Sbjct: 281 VLPSKISPIQIQIIQIKNTEQI-DQVVEIIKDKLSDYRIDV--DNSDKSFGFKISEAEIK 337 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P+++ +G + + ++++ I R Sbjct: 338 GIPIRIEIGPRDLENNQITISRR 360 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 10/133 (7%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW-VESGRYDSYGKEMLR 95 KG + P G + + + + EE + + P L L+ E + + E+ Sbjct: 35 KGTMIFRPYGYRIWELIQKYLDEEFKKINVDNVYFPLLIPESLFNKEKDHIEGFSPEIAT 94 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ--LKFRDELRPRFGV 149 + +K + PT E VM D F + I SYR+LP + Q +++ RP Sbjct: 95 VTKVGEKQLEENLFIRPTSEVVMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTTRP---F 151 Query: 150 MRSREFLMKDAYS 162 +R+ EFL ++ ++ Sbjct: 152 LRTSEFLWQEGHT 164 >gi|331090802|ref|ZP_08339649.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] gi|330399910|gb|EGG79569.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] Length = 653 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 81/417 (19%), Positives = 160/417 (38%), Gaps = 61/417 (14%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G + + + +E+ + G + P + DL+V S + Y + M L Sbjct: 259 QGLPLLMPKGAAIIQTMQRWVEDEEEKRGYVRTKTPLMAKKDLYVISDHWGHYKEGMFVL 318 Query: 97 ADRN---DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 D + ++ P +++ KSYR+LP + + FR+E G+ R Sbjct: 319 GDEDKEGEEVFALRPMTCPFQYYVYKQSQKSYRDLPCRYGETSTLFRNEDSGEMHGLTRV 378 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R+F + + + +TPE + + LG++ D+++ + Sbjct: 379 RQFTISEGH-LVITPEQVEDEFRGCVDLAKYCLTTLGVEE------------DVTYRLSL 425 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIIS--LNSIVEQWT------APYAATSDVHN 264 + +++ D + +DI+ LN + +T A Y D+ Sbjct: 426 ADPDNMDKYLGTREMWD--------EVEDIMRKMLNHLEIDYTEETGEAAFYGPKLDIQA 477 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV----QMGSYGIG 320 + ++ K + I++ + ++ MS K + K Y+ MG Y Sbjct: 478 KNVY-----GKEDTMITIQLD--MFLAERFD--MSFVDKDGEKKRPYIIHRTAMGCYE-- 526 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI--KAHDQVCRDACEKIYARLSKVGCD 378 R +A +IE ++P + P ++ ++ I K HD ++ L G Sbjct: 527 --RTLAWLIEKYAG----LFPTWLCPEQVRVLPISEKYHDYA-----HQVLGELRANGIK 575 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DD E+IG + L P ++VG+K + V ++ R G SL+ I Sbjct: 576 CTVDDRAEKIGYKIRETRLDKVPYMLVVGAKEEEEKVVSVRSRFLGDEGQKSLDTFI 632 >gi|282856964|ref|ZP_06266215.1| proline--tRNA ligase [Pyramidobacter piscolens W5455] gi|282585125|gb|EFB90442.1| proline--tRNA ligase [Pyramidobacter piscolens W5455] Length = 478 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 7/159 (4%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ + F+ +G Y S+G+ + R++ A+I + D G+I Sbjct: 220 KALQAGTSHFLGQNFAKAFNIQFQDQNGAMQYAWTTSWGV-STRMIGAIIMTHSDNDGLI 278 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYA---RLSKV--GCDVFWDDMGE-QIGSQFA 393 P VAP K ++ I D + K + RL+ V V D+ + +F Sbjct: 279 LPPRVAPVKAVILPISKDDATFAELDAKAHELANRLNSVLGPLTVRVDEQNHMRPADRFF 338 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G PL++ +G K + V R TG++ED+ E Sbjct: 339 YHLQKGVPLRLELGEKDAAAGTVRAVRRDTGVKEDLKWE 377 Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 6/147 (4%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRL----AD 98 P G +++ A + TG + P L S+ L E+ + + E + + Sbjct: 39 PTGYAIWEDLQAKFDKAFKETGHVNAYFPLLIPSSFLRKEAEHVEGFAPECAVVTHAGGE 98 Query: 99 RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMK 158 ++ ++ PT E V+ ++ ++S+R+LP Q R E RPR +R+ EFL + Sbjct: 99 ELEEPLVIRPTSETVIGAMYSKWVQSWRDLPLLINQWANVLRWEKRPRL-FLRTSEFLWQ 157 Query: 159 DAYSFDLTPEGSKHSYNKMFVSYLRIF 185 + ++ T ++ KM Y +I Sbjct: 158 EGHTAHATAAEAEEETVKMLNVYAKIM 184 >gi|119383706|ref|YP_914762.1| threonyl-tRNA synthetase [Paracoccus denitrificans PD1222] gi|166225473|sp|A1B0M2|SYT_PARDP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119373473|gb|ABL69066.1| Ser-tRNA(Thr) hydrolase [Paracoccus denitrificans PD1222] Length = 648 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 87/416 (20%), Positives = 155/416 (37%), Gaps = 54/416 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W P G + A +R R E+ P + LW +SG +++Y + Sbjct: 261 QEEAPGMVFWHPNGWSIYRELEAYMRRRLIRADYKEIKTPQVVDRILWEKSGHWEAYREN 320 Query: 93 MLRL-----ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 M + + + P + ++ +KSYR+LP + R E Sbjct: 321 MFIVEVDEEGAKEKRINALKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRYEPSGSM 380 Query: 148 -GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL-RIFHRLGLKSIPMRAESGP---I 202 G+MR R F+ DA+ F E + F+ L ++ LG + ++ + P + Sbjct: 381 HGLMRVRGFVQDDAHIF--CTEDQIEAECAGFIGLLSSVYKDLGFEKFDIKLSTRPDVRV 438 Query: 203 GGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDV 262 G D + D E + + + +D P D A Y D Sbjct: 439 GSD------EIWDKAEAALKGAIEHLDLPYEVNPGD--------------GAFYGPKLDF 478 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHY-VQMGSYGI 319 KL D++ R + G F ++LP + A + G DG H V + + Sbjct: 479 ---KLTDAI-------GREWQCG---TFQCDFNLPQRLEAEYVGEDGAKHMPVMLHRAVL 525 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G+ ++ ++ GK +W +AP ++ + +I + D ++ A L G Sbjct: 526 GSFERFIGILIENYSGKLPLW---LAPRQVVVASIVSG---ADDYVHEVVAALRAAGLRA 579 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E+I + + P+ + VG K V + V I+ E LE I Sbjct: 580 EADTRNEKINYKVREHSVGKVPVIMAVGLKEVEERSVSIRRLDRQGSESHGLESAI 635 >gi|302348192|ref|YP_003815830.1| Prolyl-tRNA synthetase [Acidilobus saccharovorans 345-15] gi|302328604|gb|ADL18799.1| Prolyl-tRNA synthetase [Acidilobus saccharovorans 345-15] Length = 482 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 6/166 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG+ W+P G + V ++R+ + TG E+ P L L ES + E+ Sbjct: 35 KGMGVWMPYGFQIRRRVTDLLRKLLDETGHEEVLFPLLIPDWMLAKESEHVKGFEDEVYW 94 Query: 96 LA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + + D+ + PT E +T ++SY+ LP FYQI FR E + ++R Sbjct: 95 VTHGGLEELDQKLALRPTSETPITYYESLWVQSYKQLPRKFYQIVSVFRYETKATRPLIR 154 Query: 152 SREFLM-KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 RE M K+A++ + E ++ + Y + F LG+ I R Sbjct: 155 VREISMFKEAHTVHESFEDAESQVKEAIDVYRKFFDSLGIPYIISR 200 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 6/169 (3%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R +++G + G ++ S + D K Y SYG+ RVVA +I D G+ Sbjct: 223 GRTLQIGTVHNLGQNFTKAFSFRIQTRDEKFDYPWQTSYGVSD-RVVATLIAIHGDDMGL 281 Query: 339 IWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV---GCDVFWDDMGEQI-GSQFA 393 + P +AP + +I I + ++ R E LS + G DD + G ++ Sbjct: 282 VLPPDIAPTQAVIIPIPSQSEEDSRKVLEYSRGVLSTLLSSGIRAKLDDREDTTPGDKYY 341 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 D G P++V +G + S + V I R T + + L E + F Sbjct: 342 YWDAKGVPVRVEIGPREASGNTVTIVRRDTLEKRTVPLSEAVGSIKKTF 390 >gi|302656156|ref|XP_003019834.1| hypothetical protein TRV_06122 [Trichophyton verrucosum HKI 0517] gi|291183606|gb|EFE39210.1| hypothetical protein TRV_06122 [Trichophyton verrucosum HKI 0517] Length = 764 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 8/161 (4%) Query: 10 ILQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +LQE+ + E A + L+ G + S G LP G K + + ++R E + Sbjct: 311 LLQEHLKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRK 370 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + +W +SG + Y +M +L D + P + +F + Sbjct: 371 RGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKRDWALKPMNCPGHCIMFGHRER 429 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR LP + R+E G+ R R+F D + F Sbjct: 430 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIF 470 >gi|302497531|ref|XP_003010766.1| hypothetical protein ARB_03468 [Arthroderma benhamiae CBS 112371] gi|291174309|gb|EFE30126.1| hypothetical protein ARB_03468 [Arthroderma benhamiae CBS 112371] Length = 764 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 8/161 (4%) Query: 10 ILQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +LQE+ + E A + L+ G + S G LP G K + + ++R E + Sbjct: 311 LLQEHLKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRK 370 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + +W +SG + Y +M +L D + P + +F + Sbjct: 371 RGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKRDWALKPMNCPGHCIMFGHRER 429 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR LP + R+E G+ R R+F D + F Sbjct: 430 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIF 470 >gi|320583690|gb|EFW97903.1| proline--trna ligase, putative [Pichia angusta DL-1] Length = 666 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 12/169 (7%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSH 333 + RGI+ + G +S + + + G +H Y S+G+ + RV+ ++ Sbjct: 380 TTGRGIQGATSHHLGQNFSKMFNISVENPLGPEHPKIYAHQTSWGL-STRVIGVMVMIHS 438 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCR-------DACEKIYARLSKVGCDVFWDDMGE 386 D KG++ P VA ++ +I + ++ + + C ++ +RL K D Sbjct: 439 DNKGLVIPPRVAQNQVVIIPVGITNKTTKEIENKLYETCSELNSRLKKADVRTITDFRDN 498 Query: 387 -QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +F+ +L G P+++ VG K ++++ V R G + +SL+ V Sbjct: 499 YSPGWKFSDWELKGVPVRLEVGPKDIANNSVMAVRRDNGEKTALSLDTV 547 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 40/81 (49%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + I+S+R+LP Q R E + +R+REFL ++ ++ LT Sbjct: 269 PTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTAHLTK 328 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 E + +K+ Y ++ L Sbjct: 329 EEASEQVSKILDLYAGVYEEL 349 >gi|114600738|ref|XP_517835.2| PREDICTED: threonyl-tRNA synthetase isoform 10 [Pan troglodytes] gi|114600740|ref|XP_001153787.1| PREDICTED: threonyl-tRNA synthetase isoform 6 [Pan troglodytes] gi|114600742|ref|XP_001153971.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 9 [Pan troglodytes] Length = 723 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 334 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 393 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 394 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 452 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 453 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 508 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 509 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 545 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 546 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 594 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 595 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 648 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 649 DIDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 705 >gi|89897864|ref|YP_514974.1| threonyl-tRNA synthetase [Chlamydophila felis Fe/C-56] gi|123722330|sp|Q256F9|SYT_CHLFF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|89331236|dbj|BAE80829.1| threoninyl tRNA synthetase [Chlamydophila felis Fe/C-56] Length = 635 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 88/430 (20%), Positives = 162/430 (37%), Gaps = 54/430 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + KL L + + S G+ + P G D + + G E+ P L Sbjct: 236 RDHRVLGTKLDLFSQ--QECSAGMPFFHPRGMIIWDALIGYWKRLHQLAGYKEILTPQLV 293 Query: 76 SADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 + LW SG + +Y + M L D D A+ P + +++ + SY+ P + Sbjct: 294 NRSLWEVSGHWSNYKENMYTLKIDEEDYAI--KPMNCPGCMLYYKTRLHSYKEFPLRIAE 351 Query: 135 IQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-- 191 I R E+ G+MR R F DA+ F LTPE + + ++ GL+ Sbjct: 352 IGHVHRYEISGALSGLMRVRAFHQDDAHVF-LTPEQVEEETLNILNLVSELYSTFGLEYH 410 Query: 192 -SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + R E IG D E LA ++ + + NT F +I+ Sbjct: 411 LELSTRPEKATIGSD---ELWDLATAA----------LERALINSNTPF--VINPGD--- 452 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSATFKGADG 307 A Y D+H K R + G I + ++ L + A G Sbjct: 453 --GAFYGPKIDIH----------VKDAIQRTWQCGTIQLDMFLPERFEL----EYTNAQG 496 Query: 308 -KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 K + + G++ ++ G+ +W ++P + LI + Q + Sbjct: 497 EKSTPIMLHRALFGSIERFLGILIEHFKGRFPLW---LSPEHVRLITVADRHQ---PRAQ 550 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++ ++G V DD E + + A + V +G + + ++ + ++ R + Sbjct: 551 ELATAWQQLGFVVTVDDSNESVSKKIRNAQNMQVNYMVTLGDREIEENTLAVRTRDNRVL 610 Query: 427 EDMSLEEVIN 436 +M+++ IN Sbjct: 611 NNMTIDTFIN 620 >gi|123981026|gb|ABM82342.1| threonyl-tRNA synthetase [synthetic construct] gi|123995829|gb|ABM85516.1| threonyl-tRNA synthetase [synthetic construct] Length = 711 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 322 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 381 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 382 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 440 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 441 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 496 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 497 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 533 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 534 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 582 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 583 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 636 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 637 DIDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 693 >gi|62897167|dbj|BAD96524.1| threonyl-tRNA synthetase variant [Homo sapiens] Length = 723 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 334 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 393 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 394 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 452 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 453 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 508 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 509 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 545 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 546 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 594 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 595 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 648 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 649 DIDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 705 >gi|38202255|ref|NP_689508.3| threonyl-tRNA synthetase, cytoplasmic [Homo sapiens] gi|60267755|sp|P26639|SYTC_HUMAN RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33875537|gb|AAH00517.2| Threonyl-tRNA synthetase [Homo sapiens] gi|119631209|gb|EAX10804.1| threonyl-tRNA synthetase, isoform CRA_b [Homo sapiens] gi|158258124|dbj|BAF85035.1| unnamed protein product [Homo sapiens] gi|168277378|dbj|BAG10667.1| threonyl-tRNA synthetase [synthetic construct] gi|190690713|gb|ACE87131.1| threonyl-tRNA synthetase protein [synthetic construct] Length = 723 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 334 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 393 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 394 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 452 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 453 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 508 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 509 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 545 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 546 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 594 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 595 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 648 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 649 DIDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 705 >gi|326477787|gb|EGE01797.1| threonyl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 763 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 8/161 (4%) Query: 10 ILQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +LQE+ + E A + L+ G + S G LP G K + + ++R E + Sbjct: 311 LLQEHLKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRK 370 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + +W +SG + Y +M +L D + P + +F + Sbjct: 371 RGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKRDWALKPMNCPGHCIMFGHRER 429 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR LP + R+E G+ R R+F D + F Sbjct: 430 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIF 470 >gi|310789482|gb|EFQ25015.1| glycyl-tRNA synthetase [Glomerella graminicola M1.001] Length = 664 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 14/117 (11%) Query: 316 SYGIGAMRVVAAVIE------SSHDG----KGII-WPDSVAPFKISLINIKAHDQVCRDA 364 S+GIG R++ ++IE ++ DG +G++ +P +VAP K+ ++ + A+ Q + Sbjct: 504 SFGIG--RILYSLIEHVYWNRATEDGGDEARGVLSFPPTVAPTKVLIVPLSANKQF-QPF 560 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 KI +L K+G D IG +++ D LG PL + + + V DS + ++ R Sbjct: 561 INKISQKLRKIGISARVDSSSATIGKRYSRNDELGTPLGITIDFQTVQDSTITLRDR 617 Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK--HSYNKMFVSY 181 + + +PF I +R+E+ PR G++R REFLM + F + PEG K H + ++ Sbjct: 236 NMQQMPFASASIGRSYRNEISPRAGLLRVREFLMAEIEHF-VDPEGGKKHHRFPEVDAIE 294 Query: 182 LRIFHR 187 L + R Sbjct: 295 LTLLDR 300 >gi|327308738|ref|XP_003239060.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326459316|gb|EGD84769.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 764 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 8/161 (4%) Query: 10 ILQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +LQE+ + E A + L+ G + S G LP G K + + ++R E + Sbjct: 311 LLQEHLKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRK 370 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + +W +SG + Y +M +L D + P + +F + Sbjct: 371 RGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKRDWALKPMNCPGHCIMFGHRER 429 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR LP + R+E G+ R R+F D + F Sbjct: 430 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIF 470 >gi|327472776|gb|EGF18203.1| serine--tRNA ligase [Streptococcus sanguinis SK408] Length = 425 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|325972697|ref|YP_004248888.1| threonyl-tRNA synthetase [Spirochaeta sp. Buddy] gi|324027935|gb|ADY14694.1| threonyl-tRNA synthetase [Spirochaeta sp. Buddy] Length = 581 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 67/165 (40%), Gaps = 2/165 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P+G + ++ R E G + P + + LW SG D Y M Sbjct: 204 GLVYWHPMGARIRQSIENFWRSEHYANGYEMVYTPHIGRSWLWETSGHLDFYKDGMYPPM 263 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR-DELRPRFGVMRSREFL 156 + + P + I+++ SYR+LP + ++ +R ++ G+MR R F Sbjct: 264 EMDKSDYYVKPMNCPFHIMIYKNSKHSYRDLPCRWAELGTVYRYEKAGAMHGLMRVRGFT 323 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 DA+ F +TP+ ++ L + H G I + P Sbjct: 324 QDDAHLF-VTPDQMNDEILEVLRFSLHMLHSFGFTEINAYLSTKP 367 >gi|313126275|ref|YP_004036545.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] gi|312292640|gb|ADQ67100.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] Length = 641 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 3/125 (2%) Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P L +LW +SG YD+Y +M L D ND+ P + IF + SYR+L Sbjct: 293 VETPHLFRTELWKKSGHYDNYVDDMF-LLDVNDEEYGLKPMNCPGHATIFDQNSWSYRDL 351 Query: 129 PFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P +++ +R E R G+ R F + D + F PE + ++ S + Sbjct: 352 PVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLF-CRPEQIEQEIRQVMNSIYEVLDT 410 Query: 188 LGLKS 192 GL++ Sbjct: 411 FGLEA 415 >gi|257053756|ref|YP_003131589.1| prolyl-tRNA synthetase [Halorhabdus utahensis DSM 12940] gi|256692519|gb|ACV12856.1| prolyl-tRNA synthetase [Halorhabdus utahensis DSM 12940] Length = 484 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 78/158 (49%), Gaps = 8/158 (5%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GT ++ T+ D + S+G+ + R + A+ + D +G+ Sbjct: 225 GKSVQGGTSHYLGTSFAEAYDVTYVDEDEEVKTAHTTSWGL-SWRALGALFMTHSDDQGL 283 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ-IGSQFAV 394 + P ++A ++ ++ I + D V A E + A L G V DD + G ++ Sbjct: 284 VLPPTLAETQVVIVPIWDEDSKDDVLAYA-EDVEADLEDAGVRVELDDRDHRNPGFKYNE 342 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +L G PL++ +GS V+D ++ + HR G E++++E Sbjct: 343 HELNGVPLRIEIGSYEVADDELTLVHRPDG--EEITVE 378 >gi|242278821|ref|YP_002990950.1| threonyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] gi|259516380|sp|C6BRH1|SYT_DESAD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|242121715|gb|ACS79411.1| threonyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] Length = 642 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 80/387 (20%), Positives = 157/387 (40%), Gaps = 41/387 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + R+E + G + P + +LW +SG YD+Y +E + Sbjct: 259 GMTIWHPKGALIRAILEDFERKEHLKRGYQFVQGPLILKRELWEKSGHYDNY-RENMYFT 317 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++++ P + +F+S ++SYR+LP +++ + R E G++R R F Sbjct: 318 EIDEQSYGIKPMNCLSHMLVFKSRLRSYRDLPQRYFEHGVVHRHEKSGVLHGLLRVRTFT 377 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ P+ +L + I + G + G E+ T Sbjct: 378 QDDAHLI-CRPD------------------QLRDEIIGVAKFVGDVMGLFGFEYEAEVST 418 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + S + D + ++ SI E A Y D+ + D+L +R Sbjct: 419 KPEKAIGSDEDWDRATEALEGALKEMGMEYSINEGDGAFYGPKIDI---IIKDAL--ERR 473 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSHD 334 I+ F ++ L ++ G DG+ H V + +G++ R + ++E H Sbjct: 474 WQCATIQCD--FTLPERFDL----SYVGEDGERHRPVMLHRVILGSIERFIGVLLE--HT 525 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 G + P ++P + ++ + + +K+ L + G DD E++G + Sbjct: 526 GGAL--PAWLSPVQAKILTVTDSQN---EFAQKVLQFLREKGIRAEVDDRNEKLGYKVRE 580 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHR 421 A L P +++G K V+ V ++ R Sbjct: 581 AQLEKIPYMLVIGDKEVAAESVNVRAR 607 >gi|324500217|gb|ADY40110.1| Bifunctional aminoacyl-tRNA synthetase [Ascaris suum] Length = 1924 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/338 (19%), Positives = 129/338 (38%), Gaps = 69/338 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + IKS+R+LP Q R E + +R+REFL ++ ++ T Sbjct: 1531 PTSETVMYPSYAKWIKSHRDLPLRLNQWCNVVRWEFKHPTPFLRTREFLWQEGHTAFQTA 1590 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E + ++ Y +++ L +IP +V E + F DF Sbjct: 1591 EEAHQEVFQILDLYAKVY--TDLLAIP----------------VVKGRKSEKEKFAGGDF 1632 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + VE + V+ R I+ Sbjct: 1633 ------------------TTTVEAYVP----------------------VNGRAIQGATS 1652 Query: 288 FYFGTKYSLPMSATFKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 + G +S +F+ + G YV S+G+ R + A++ D G++ P VAP Sbjct: 1653 HHLGQNFSKMFDISFEDPNTGSKAYVYQNSWGL-TTRTIGAMVMIHGDDFGLVLPPRVAP 1711 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD-------DMGEQI--GSQFAVADL 397 ++ ++ + Q + + ++ ++ + + D+ + G +F + Sbjct: 1712 IQVIVVPVGITAQTSEEQRVSLISKAKEIASMLLTEADIRAEADLRDNYSPGWKFNHWEQ 1771 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P+++ VG K V++S+V R +G + + + +I Sbjct: 1772 KGVPIRMEVGPKDVANSQVTCVIRHSGKKVAVPMANLI 1809 >gi|330840876|ref|XP_003292434.1| hypothetical protein DICPUDRAFT_157146 [Dictyostelium purpureum] gi|325077326|gb|EGC31046.1| hypothetical protein DICPUDRAFT_157146 [Dictyostelium purpureum] Length = 686 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%) Query: 292 TKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH------DGKGII-WPDSV 344 TK + ++ + GK++Y + G R++ A++E ++ + +G++ P + Sbjct: 509 TKEMVTITKGQEKKSGKNYYPHVIEPSFGLGRIIYALLEQNYWTRENDEQRGVLSLPAII 568 Query: 345 APFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 AP K S++ + +++ KI L + G DD G IG ++A D +G P + Sbjct: 569 APVKASILPLTNSEKLV-PFVAKISKLLKEAGISTKLDDTGNAIGRKYARTDEIGIPFGI 627 Query: 405 IVGSKFVSDSKVEIKHRLT 423 + V D V ++ R T Sbjct: 628 TIDFTTVEDETVTLRERDT 646 Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 112 EVMTDIFRSHIKSY----RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 E IF + K Y + LPF QI FR+E+ PR G++R REF M + F + P Sbjct: 253 ETAQGIFVNFAKLYEFNGKKLPFAAAQIGNAFRNEIAPRSGLLRVREFTMAEIEHF-VNP 311 Query: 168 EGSKH 172 H Sbjct: 312 NEKTH 316 >gi|149910913|ref|ZP_01899544.1| threonyl-tRNA synthetase [Moritella sp. PE36] gi|149805980|gb|EDM65964.1| threonyl-tRNA synthetase [Moritella sp. PE36] Length = 513 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 14/180 (7%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H+ G W+ + L+N +IRE+ E+ P + LW +SG +D Y Sbjct: 262 GMVFWHNDG---WIIF--RELEN---LIREKLREFDYQEVKGPQIMDRSLWEKSGHWDKY 313 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M N + I P + I+ +KSYR+LP + R+E G Sbjct: 314 SEGMFCTHSENREYAI-KPMNCPGHVQIYNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 +MR R F DA+ F T + + + G ++I ++ + P +G D Sbjct: 373 LMRVRGFTQDDAHIF-CTESQIQKEVSDCIKMVFETYATFGFENIEIKLSTRPEKRVGSD 431 >gi|312862541|ref|ZP_07722783.1| serine--tRNA ligase [Streptococcus vestibularis F0396] gi|311101946|gb|EFQ60147.1| serine--tRNA ligase [Streptococcus vestibularis F0396] Length = 425 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G EM P + Sbjct: 154 RGAKVTGSRFLFYKGLGAKLERAIYNFM------LD--------EHAKEGYTEMITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L D D +I PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFEL-DGTDYVLI--PTAEVPLTNYYRGEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM V+ I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPESSYDELEKMVVNAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|300114474|ref|YP_003761049.1| threonyl-tRNA synthetase [Nitrosococcus watsonii C-113] gi|299540411|gb|ADJ28728.1| threonyl-tRNA synthetase [Nitrosococcus watsonii C-113] Length = 644 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P+G + + +E + P + +LW SG D Y + M + Sbjct: 262 GLVFWHPMGARIRRVIEDFWQERHTAASYETLYTPHIAHEELWQTSGHTDFYRESMYQPM 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + + P + +++ ++SYR LP + ++ +R E+ G+MR R F Sbjct: 322 EDDHQLYQLKPMNCPFHVLVYQGRLRSYRELPIRWAELGTVYRHEMSGALHGLMRVRGFT 381 Query: 157 MKDAYSF 163 DA+ F Sbjct: 382 QDDAHIF 388 >gi|325679048|ref|ZP_08158642.1| threonine--tRNA ligase [Ruminococcus albus 8] gi|324109172|gb|EGC03394.1| threonine--tRNA ligase [Ruminococcus albus 8] Length = 648 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 86/410 (20%), Positives = 154/410 (37%), Gaps = 44/410 (10%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ LP G K + + I +E+ R G P + +L+ SG +D Y M Sbjct: 261 GQGLPILLPKGAKVIQTLQRWIEDEEYRRGYQLTKTPFMSKRELYKISGHWDHYRDGMFI 320 Query: 96 LADRNDK---AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 L D +D+ P +F + +SYR+LP + FR E G++R Sbjct: 321 LGDPDDETKECFALRPMTCPFQYQVFLNRKRSYRDLPMRLGETSTLFRKEDSGEMHGLIR 380 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R+F + + + + PE + + +GL S + ++++ Sbjct: 381 VRQFTISEGHLI-IRPEQLEDEFKGCLALAKYCLETIGLAEDVSYRFSQWDPANPNNKYE 439 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 A+ E K +D + D I ++ A Y D+ + +F Sbjct: 440 GTAEQWEEAQGAMKKILD------DIGLDYEIGIDE-----AAFYGPKLDIQIKNVFGK- 487 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK------DHYVQMGSYGIGAMRVV 325 E+ ++ + I++ FG +Y DGK H +G Y R + Sbjct: 488 -EDTLITIQ-IDMQIAKKFGMEYV--------DKDGKMKMPYIIHRTSVGCYE----RTL 533 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A +IE + G +W +AP ++ ++ IK D ++ + +G V D Sbjct: 534 ALLIE-KYAGVLPLW---LAPEQVRILPIKPEHN---DYAYELAEEMRDLGMRVEVDGED 586 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + IG + A P I+G V D V ++ R G M + + I Sbjct: 587 DNIGPKIKQARFDRVPYMFIIGDNEVKDRTVTVRSRKEGELPAMPVADAI 636 >gi|225851210|ref|YP_002731444.1| threonyl-tRNA synthetase [Persephonella marina EX-H1] gi|225645886|gb|ACO04072.1| threonyl-tRNA synthetase [Persephonella marina EX-H1] Length = 646 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 1/125 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + +EE + G + P + LW SG D Y + M Sbjct: 268 GLALWLPKGAVIRNEIETAWKEEHIKRGYQLVYTPHVGKEQLWQTSGHVDFYRENMFPEM 327 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + +I++S +SY+ LP ++ +R E G+MR R F Sbjct: 328 MIEEEGYFVKPMNCPFHVEIYKSRQRSYKELPIKLAELGTVYRYERSGVLHGLMRVRGFT 387 Query: 157 MKDAY 161 DA+ Sbjct: 388 QDDAH 392 >gi|116195310|ref|XP_001223467.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88180166|gb|EAQ87634.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 556 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 7/173 (4%) Query: 23 HKLMLRTGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADL 79 +++L+ MI +++ G + P + + +E G E + P L L Sbjct: 62 QEVVLKAEMIEYYTEISGFFIMRPATMYVWNTIRKWFQERIEEMGVEETNFPMFLSQKSL 121 Query: 80 WVESGRYDSYGKEMLRLADRNDK----AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 E + + E+ + DK + PT E VM + I+S+R+LPF Q Sbjct: 122 EKEKDHVEGFAPELAWVTKAGDKDLEVPVAVRPTSEAVMYPYYSKWIRSHRDLPFRLNQW 181 Query: 136 QLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 R E + +R+REFL ++ ++ LT + + ++ Y I+ +L Sbjct: 182 NSVVRWEAKQTTPFLRAREFLWQEGHTAHLTEQLAGEEVLQILELYAGIYEQL 234 >gi|298709965|emb|CBJ31687.1| Proline--tRNA ligase, central part [Ectocarpus siliculosus] Length = 492 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/315 (20%), Positives = 118/315 (37%), Gaps = 68/315 (21%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E V+ ++R I SYR+LP Q R E+R R ++RS EFL ++ Sbjct: 204 EEPLVVRPTSETVIWTMYRKWIDSYRDLPLKLNQWANVVRWEMRTR-PLLRSAEFLWQEG 262 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ T E + +M V Y T + Sbjct: 263 HTAHATKEEALSCAQEMLVEY---------------------------------STACRE 289 Query: 221 VFCSKDFMDFPIPSEN-TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 M P E D+ ++ ++++ A + TS + A Sbjct: 290 TLALPTVMGVKSPKERFAGADETYTIEALMQNGWALQSGTSHFLGQNF-----------A 338 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R EV Y+ T D K V S+G+ R++ A++ + D G+ Sbjct: 339 RAFEV----YYQT------------PDEKRELVWATSWGV-TTRLMGAMVMTHSDDFGLR 381 Query: 340 WPDSVAPFKISLINIKA----HDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAV 394 P +VAP ++ ++ I + A + + +L G V D+ + G+++ Sbjct: 382 LPPAVAPKQVVIVPITKGPGEDTDLVNKAVDGVVDQLKAAGVRVKVDERPNMRPGAKYFQ 441 Query: 395 ADLLGFPLQVIVGSK 409 + G PL V +G K Sbjct: 442 WEAKGVPLPVELGPK 456 >gi|332251678|ref|XP_003274973.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 3 [Nomascus leucogenys] Length = 619 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 86/418 (20%), Positives = 162/418 (38%), Gaps = 59/418 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 230 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 289 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M + + P + +F +S+R LP + R+EL G+ Sbjct: 290 DNMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 348 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 349 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSIFGFSFKLNLSTRPEKFLGD-- 404 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 405 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 441 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + ++ D++ + + ++ F +++L T+ DG D V + + Sbjct: 442 I---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAIL 490 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGC 377 G++ + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K Sbjct: 491 GSVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMA 544 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D+ D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 545 DIDLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 601 >gi|269302597|gb|ACZ32697.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN] Length = 635 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 90/435 (20%), Positives = 163/435 (37%), Gaps = 52/435 (11%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD + KL L + + S G+ + P G D + ++ G E+ Sbjct: 230 IEEAKKRDHRVLGAKLDLFSQ--QESSPGMPFFHPRGMIVWDALIRYWKQLHTAAGYKEI 287 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 P L + LW SG +D+Y M L D D A+ P + +++ + SY+ Sbjct: 288 LTPQLMNRQLWEVSGHWDNYKANMYTLQIDDEDYAI--KPMNCPGCMLYYKTRLHSYKEF 345 Query: 129 PFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P +I R E G+MR R F DA+ F LTPE + + ++ Sbjct: 346 PLRVAEIGHVHRQEASGALSGLMRVRAFHQDDAHVF-LTPEQVEEETLNILQLVSTLYGT 404 Query: 188 LGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 GL+ + R E IG D E + D ++ + T F I+ Sbjct: 405 FGLEYHLELSTRPEKDTIGDDSLWEL-------------ATDALNRALVQSGTPF--IVR 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSAT 301 A Y D+H K R + G I + ++ L + T Sbjct: 450 PGE-----GAFYGPKIDIH----------VKDAIQRTWQCGTIQLDMFLPERFELEYT-T 493 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 +G K V + G++ ++ + G+ +W ++P ++ +I + Sbjct: 494 AQGT--KSVPVMLHRALFGSIERFLGILIENFKGRFPLW---LSPEQVRIITVADRHIPG 548 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+ + RL G V DD E + + A + + +G ++++ + ++ R Sbjct: 549 AKELEEAWKRL---GLVVTLDDSSESVSKKIRNAQNMQVNYMITLGDHEINENVLAVRTR 605 Query: 422 LTGIREDMSLEEVIN 436 + D+S+E +N Sbjct: 606 DNRVINDVSVERFLN 620 >gi|254470004|ref|ZP_05083408.1| threonyl-tRNA synthetase [Pseudovibrio sp. JE062] gi|211960315|gb|EEA95511.1| threonyl-tRNA synthetase [Pseudovibrio sp. JE062] Length = 648 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 13/208 (6%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIH---QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H+ + R ++ + G+ W G + N+ +R + Sbjct: 230 KAYLHMLEE----AEKRDHRKLGREMDLYHFQEEGPGVVFWHHKGWQLFQNLTNYMRR-R 284 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 E++ P + LW SG ++ Y + M + + P + IF+ Sbjct: 285 LEDDYQEVNAPQILDKALWETSGHWEWYRENMFATETEDHRVFAIKPMNCPGHVQIFKHG 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP + R E G+MR R F DA+ F T E +K+ Sbjct: 345 LKSYRDLPLRMAEFGAVSRYEPSGALHGLMRVRAFTQDDAHVF-CTEEQMAAECHKINDL 403 Query: 181 YLRIFHRLGLKSIPMRAESGP---IGGD 205 + ++ G + I ++ + P +G D Sbjct: 404 IMSVYKDFGFEEIVVKLSTRPEKRVGSD 431 >gi|315501868|ref|YP_004080755.1| tRNA synthetase class ii (g h p and s) [Micromonospora sp. L5] gi|315408487|gb|ADU06604.1| tRNA synthetase class II (G H P and S) [Micromonospora sp. L5] Length = 404 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 12/133 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G A V +RE + R G + P L +L+ SG + +M + Sbjct: 23 GLPIWLPAGAAARHAVEEYVRELERRAGYQHVYSPPLGKRELFERSGHLGYFADDMFPPM 82 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM---- 150 RL+ D + P +FR+ +SYR LP ++ +R E R GV+ Sbjct: 83 RLS--ADDEFVLRPALCPHHALVFRARGRSYRELPLRVAELGGMYRAE---RSGVLGGLS 137 Query: 151 RSREFLMKDAYSF 163 R R + DA++F Sbjct: 138 RVRAISLNDAHNF 150 >gi|121535635|ref|ZP_01667441.1| threonyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] gi|121305805|gb|EAX46741.1| threonyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] Length = 513 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 84/393 (21%), Positives = 148/393 (37%), Gaps = 59/393 (15%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA 103 P G + + R+ + G E+ P + LW +SG +D Y +E + + + Sbjct: 144 PKGMVIRNELENFWRKLHVKYGYQEIKTPIILHQRLWQQSGHWDHY-RENMYFTTIDGEG 202 Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYS 162 P + ++R+ SYR+LP ++ L R EL G+MR R F DA+ Sbjct: 203 YAVKPMNCPGGILVYRTQHHSYRDLPLRTCELGLVHRHELSGALHGLMRVRSFTQDDAHI 262 Query: 163 FDLTP------EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 F L +G +N+++ ++ +H L + P +A +G D E T Sbjct: 263 FMLPSQIKDEIQGVIDLFNEVYSTFGLTYH-AELSTKPEKA----MGSDEIWEVA----T 313 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + + M + I + F Y D H L DS+ Sbjct: 314 NALREALEERGMPYKINEGDGAF----------------YGPKIDFH---LRDSI----- 349 Query: 277 VSARGIEVGHI---FYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESS 332 R + G I K+ L T+ G DG+ H V + G++ ++ Sbjct: 350 --GRTWQCGTIQLDMLMPEKFDL----TYVGEDGQKHRPVMIHRVAYGSLERFIGILIEH 403 Query: 333 HDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 + G +P +AP ++ ++ I H ++ + ++ +V D E+IG + Sbjct: 404 YAGA---FPTWLAPVQVKILPITDRHVAYAQEVATLMRSKDIRVEV----DSRNEKIGYK 456 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 L P +IVG K V ++ R G Sbjct: 457 IREGQLEKVPYMLIVGDKETETRTVAVRKRGQG 489 >gi|302410789|ref|XP_003003228.1| glycyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] gi|261358252|gb|EEY20680.1| glycyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] Length = 663 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 13/116 (11%) Query: 316 SYGIGAMRVVAAVIESSHDGKG----------IIWPDSVAPFKISLINIKAHDQVCRDAC 365 S+GIG R++ ++IE S+ +G + +P +VAP K+ ++ + A+ + + Sbjct: 504 SFGIG--RILYSLIEHSYWTRGSDGGDEARSVLSFPPTVAPTKVLIVPLSAN-KAFKPFI 560 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +KI +L KVG DD IG +++ D LG PL + + + V DS ++ R Sbjct: 561 QKISQKLRKVGVSSRIDDSSATIGKRYSRNDELGTPLGITIDFQSVQDSTYTLRDR 616 Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171 + +PF I +R+E+ PR G++R REFLM + F + PEG K Sbjct: 238 QQMPFASASIGKSYRNEISPRAGLLRVREFLMAEIEHF-VDPEGGK 282 >gi|260424668|ref|ZP_05732876.2| threonine--tRNA ligase [Dialister invisus DSM 15470] gi|260402758|gb|EEW96305.1| threonine--tRNA ligase [Dialister invisus DSM 15470] Length = 647 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 88/401 (21%), Positives = 151/401 (37%), Gaps = 53/401 (13%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ G + P G + + A RE G E+ P + S LW++SG +D Y KE Sbjct: 268 HEEGPGFPFFHPKGMVIRNELIAYERELFREFGYEEIMTPIILSKKLWLQSGHWDHY-KE 326 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + +++ P + ++++ SYR LP + + R EL G+ R Sbjct: 327 NMYFTQIDEEDYAVKPMNCPGGILYYKTNQHSYRELPKRVGEFGIVHRHELHGALHGLFR 386 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F +T + K K Y +++ GL E+ Sbjct: 387 VRVFTQDDAHIF-MTQDQMKDEVIKTMEMYRKLYSVFGL------------------EYH 427 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD---VHNEKLF 268 V T S++ + S N +L VE PY + KL Sbjct: 428 VELSTRPENSMGSEELWEI---STN-------ALRDAVEAAGVPYVINEGDGAFYGPKLD 477 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDH-YVQMGSYGIGAM-RV 324 + K R + G I LP + G DG+ H V + G G++ R Sbjct: 478 FHI---KDCLGRTWQCGTI---QMDMQLPERFDVNYVGEDGEKHRAVMLHRAGYGSLERF 531 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDD 383 + +IE +P +AP ++ ++ + + H R + + A +V + D Sbjct: 532 IGILIEHFAGA----FPSWIAPVQVKVVPVTEKHMNYARSVADALSASNVRVEIEEGNDT 587 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +G +I A + P ++VG K ++ V ++ R G Sbjct: 588 LGYKIRK----AQMEKVPYTLVVGDKEMNGHTVSVRSRKNG 624 >gi|253567818|ref|ZP_04845229.1| threonyl-tRNA synthetase [Bacteroides sp. 1_1_6] gi|251841891|gb|EES69971.1| threonyl-tRNA synthetase [Bacteroides sp. 1_1_6] Length = 556 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 3/131 (2%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + +R Q R E+ P + + L+V SG Y YGK+ + Sbjct: 260 GKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQ 319 Query: 96 LADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 ++ Y P + +I+++ +SY++LP + R E G+ R Sbjct: 320 PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSGELHGLTRV 379 Query: 153 REFLMKDAYSF 163 R F DA+ F Sbjct: 380 RSFTQDDAHIF 390 >gi|145593854|ref|YP_001158151.1| prolyl-tRNA synthetase [Salinispora tropica CNB-440] gi|145303191|gb|ABP53773.1| prolyl-tRNA synthetase [Salinispora tropica CNB-440] Length = 468 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 9/97 (9%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 ++ PT E V+ + + SYR+LP Q R ELRPR +R+ EFL ++ ++ Sbjct: 104 VVVRPTSETVIGEFMAKWVDSYRDLPLLLNQWANVVRWELRPRI-FLRTSEFLWQEGHTA 162 Query: 164 DLTPEGSK--------HSYNKMFVSYLRIFHRLGLKS 192 T E ++ +Y + V+ L I ++GLK+ Sbjct: 163 HTTREDARAYARRILHEAYEDLMVNVLAIPVQVGLKT 199 >gi|123239921|emb|CAM27479.1| prolyl-tRNA synthetase (mitochondrial)(putative) [Mus musculus] Length = 163 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 42/77 (54%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L+ D S +LML+ G+I S G Y +P +A++ + +I +E G +++ Sbjct: 86 LEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKIN 145 Query: 71 VPTLQSADLWVESGRYD 87 +P+L A+LW + R+D Sbjct: 146 MPSLSPAELWRATSRWD 162 >gi|39996615|ref|NP_952566.1| threonyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|73919793|sp|Q74D04|SYT_GEOSL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|39983496|gb|AAR34889.1| threonyl-tRNA synthetase [Geobacter sulfurreducens PCA] Length = 636 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 3/132 (2%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G W P G + R E + G + P + +LW SG YD+Y +E + Sbjct: 263 GFVIWHPKGAMLRTLLEDFERREHLKRGYDIVVGPQILKTELWQRSGHYDNY-RENMYFT 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + P + I++S ++SYR+LP F+++ R E G++R R F Sbjct: 322 EVEGQGFGIKPMNCLSHMMIYKSQLRSYRDLPLRFFELGTVHRHERAGVLHGLLRVRCFT 381 Query: 157 MKDAYSFDLTPE 168 DA+ TPE Sbjct: 382 QDDAHIL-CTPE 392 >gi|322386847|ref|ZP_08060471.1| serine--tRNA ligase [Streptococcus cristatus ATCC 51100] gi|321269129|gb|EFX52065.1| serine--tRNA ligase [Streptococcus cristatus ATCC 51100] Length = 446 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 175 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 220 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 221 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 277 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 278 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 335 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 336 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 366 >gi|57237210|ref|YP_178222.1| threonyl-tRNA synthetase [Campylobacter jejuni RM1221] gi|73919779|sp|Q5HWW3|SYT_CAMJR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|57166014|gb|AAW34793.1| threonyl-tRNA synthetase [Campylobacter jejuni RM1221] gi|315057643|gb|ADT71972.1| Threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3] Length = 602 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 91/448 (20%), Positives = 175/448 (39%), Gaps = 51/448 (11%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD +L L T + G+ WL G + + ++ + Sbjct: 195 KEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRL 253 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L AD W SG Y +Y KE + +++ P + I++S ++ Sbjct: 254 RGYEPVRGPELLKADAWKISGHYANY-KENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVR 312 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM-FV-S 180 SYR+LP F++ + R E G+ R REF DA+ F + + + + FV + Sbjct: 313 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDN 372 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +++F D S+E + T + + + + D Sbjct: 373 LMKLF-------------------DFSYEMEI--STKPEKAIGDDEIWEVATKALKEALD 411 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ K+ D+L R + G I ++LP Sbjct: 412 EQGLKYGIDEGGGAFYGPKIDI---KITDAL-------KRKWQCGTI---QVDFNLPSRF 458 Query: 301 TFKGADG---KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KA 356 + D K V + +G+ ++ G+ +P +AP + ++ I +A Sbjct: 459 KLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGE---FPFFIAPTAVGIVPIGEA 515 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 H ++ I L ++ D + E + + +A+ P+ +++G V+ V Sbjct: 516 HIAYAKE----IQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSV 571 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ R ++++SL+E I + S Sbjct: 572 ALRDRRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|307634865|gb|ADI84351.2| threonyl-tRNA synthetase [Geobacter sulfurreducens KN400] Length = 645 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 3/132 (2%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G W P G + R E + G + P + +LW SG YD+Y +E + Sbjct: 272 GFVIWHPKGAMLRTLLEDFERREHLKRGYDIVVGPQILKTELWQRSGHYDNY-RENMYFT 330 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + P + I++S ++SYR+LP F+++ R E G++R R F Sbjct: 331 EVEGQGFGIKPMNCLSHMMIYKSQLRSYRDLPLRFFELGTVHRHERAGVLHGLLRVRCFT 390 Query: 157 MKDAYSFDLTPE 168 DA+ TPE Sbjct: 391 QDDAHIL-CTPE 401 >gi|306830557|ref|ZP_07463724.1| serine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304427275|gb|EFM30380.1| serine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 425 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGSRFLFYKGLGARLERAIYNFM------LD--------EHAKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD +D +I PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELAD-SDYVLI--PTAEVPLTNYYRGEILDGKELPVYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +LGL Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPETSYDELEKMVANAENILQKLGL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|296805896|ref|XP_002843772.1| glycyl-tRNA synthetase 1 [Arthroderma otae CBS 113480] gi|238845074|gb|EEQ34736.1| glycyl-tRNA synthetase 1 [Arthroderma otae CBS 113480] Length = 685 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 1/118 (0%) Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G ++ +E++ + + + P SVAP K+ L+ + +H Q R + + ++L +G Sbjct: 546 VGINSGLSISLEANINVQVLSLPPSVAPTKVLLVPLSSH-QSFRPIIKNLSSQLRSLGIS 604 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DD IG ++A D LG P + V V DS + ++ R T + + EE+I+ Sbjct: 605 NRIDDSNASIGKRYARNDELGTPFGITVDFDTVKDSTITLRERDTTKQVRGTTEEIIS 662 Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 11/105 (10%) Query: 118 FRSHIKSYRN-LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 FR ++ N +PF + +R+E+ PR G++R REFLM + F G KH Sbjct: 243 FRKMLEYNNNTMPFASASVGKSYRNEISPRAGLLRVREFLMAEIEHFVDPDNGKKHER-- 300 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 F + +P +S + G + +++ L E + Sbjct: 301 --------FENVQHLELPFLDQSTQLSGQTTAKYLSLGKAVEKNI 337 >gi|116627246|ref|YP_819865.1| seryl-tRNA synthetase [Streptococcus thermophilus LMD-9] gi|122268151|sp|Q03MA3|SYS_STRTD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116100523|gb|ABJ65669.1| seryl-tRNA synthetase [Streptococcus thermophilus LMD-9] Length = 425 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G EM P + Sbjct: 154 RGAKVTGSRFLFYKGLGARLERAIYNFM------LD--------EHAKEGYTEMITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L D D +I PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFEL-DGTDYVLI--PTAEVPLTNYYRGEILDGKELPIYFTAL 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM V+ I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPEDSYDELEKMVVNAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|332251676|ref|XP_003274972.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 2 [Nomascus leucogenys] Length = 756 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 86/416 (20%), Positives = 162/416 (38%), Gaps = 59/416 (14%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 369 HELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSDN 428 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + +F +S+R LP + R+EL G+ R Sbjct: 429 MFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTR 487 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSHE 209 R F DA+ F + K + +LR + + S + + P GD Sbjct: 488 VRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSIFGFSFKLNLSTRPEKFLGD---- 541 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDVH 263 I + D E Q+ EN SLN E+W A Y D+ Sbjct: 542 -IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKIDI- 579 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGA 321 ++ D++ + + ++ F +++L T+ DG D V + +G+ Sbjct: 580 --QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAILGS 629 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGCDV 379 + + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K D+ Sbjct: 630 VERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMADI 683 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 684 DLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 738 >gi|326476791|gb|EGE00801.1| threonyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 753 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 8/161 (4%) Query: 10 ILQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +LQE+ + E A + L+ G + S G LP G K + + ++R E + Sbjct: 301 LLQEHLKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRK 360 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + +W +SG + Y +M +L D + P + +F + Sbjct: 361 RGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKRDWALKPMNCPGHCIMFGHRER 419 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR LP + R+E G+ R R+F D + F Sbjct: 420 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIF 460 >gi|258592606|emb|CBE68915.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [NC10 bacterium 'Dutch sediment'] Length = 680 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 2/132 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + RE+ + G + P + A LW SG D Y + M Sbjct: 290 GLVLWHPKGALVRKLIEDLWREQHLKNGYDLVYTPHVGRATLWETSGHLDFYQEFMYPRM 349 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + P + +F+S + SYR LP F ++ +R E G++R R F Sbjct: 350 EMEGNDYYVKPMNCPFHIKLFQSKVHSYRELPVRFAELGTVYRFERAGVLHGLLRVRGFT 409 Query: 157 MKDAYSFDLTPE 168 DA+ F TP+ Sbjct: 410 QDDAHIF-CTPQ 420 >gi|332796370|ref|YP_004457870.1| glycyl-tRNA synthetase [Acidianus hospitalis W1] gi|332694105|gb|AEE93572.1| glycyl-tRNA synthetase [Acidianus hospitalis W1] Length = 570 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 3/103 (2%) Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P +AP+++++ + D++ A E IY+++ K D +DD G IG ++A AD +G Sbjct: 457 PREIAPYEVAVFPLLERDELISRARE-IYSKV-KEKFDAIFDDSG-SIGKRYARADEIGI 513 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 P + V + + D+ V I+ R T + + EE+IN FS Sbjct: 514 PYAITVDPQTLQDNTVTIRDRDTWNQIRVKEEELINTLEKLFS 556 >gi|253580110|ref|ZP_04857377.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848629|gb|EES76592.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 653 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 3/128 (2%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G + + I +E+ + G I P + +DL+ SG +D Y + M L Sbjct: 259 QGLPLIMPNGVIMMQELQRWIEDEETKRGYIRTKTPLMAKSDLYKISGHWDHYKEGMFVL 318 Query: 97 ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D ++ P ++++ SYR+LP + + FR+E G+ R R Sbjct: 319 GDEETDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYGETSTLFRNEDSGEMHGLTRVR 378 Query: 154 EFLMKDAY 161 +F + + + Sbjct: 379 QFTISEGH 386 >gi|261203861|ref|XP_002629144.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239586929|gb|EEQ69572.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] Length = 747 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 8/160 (5%) Query: 11 LQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +QE+ + E A + LR G + S G LP G K + + ++R E + Sbjct: 294 MQEHLKFLEEAEKRNHLRIGKDQDLFFFDEVSPGCPFLLPNGTKIFNALQKLLRSEYLKR 353 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + +W +SG + Y +M +L D + P + +F +S Sbjct: 354 GYQEVQSPNMYDVGIWRQSGHWQHYKDDMFKL-DIEKRTWALKPMNCPGHAIMFGHKERS 412 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 YR LP + R+E G+ R R+F D + F Sbjct: 413 YRELPIRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIF 452 >gi|119358269|ref|YP_912913.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] gi|119355618|gb|ABL66489.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] Length = 675 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 6/132 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + + ++EEQ + G + + P + + +L+ SG Y Y L Sbjct: 288 GLPVWLPKGAIIRNELETFLKEEQRKRGYLPVYTPHIGNIELYKRSGHYPYYSDSQFPPL 347 Query: 95 RLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D N K Y P + I+ ++SYR+LP + +R E G++R Sbjct: 348 TYHDENGKQEQYLLKPMNCPHHHLIYNVKLRSYRDLPIRLAEFGTVYRHEQSGELNGLVR 407 Query: 152 SREFLMKDAYSF 163 +R F D++ + Sbjct: 408 ARGFTQDDSHIY 419 >gi|228476564|ref|ZP_04061246.1| seryl-tRNA synthetase [Streptococcus salivarius SK126] gi|228251759|gb|EEK10824.1| seryl-tRNA synthetase [Streptococcus salivarius SK126] Length = 425 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G EM P + Sbjct: 154 RGAKVTGSRFLFYKGLGAKLERAIYNFM------LD--------EHAKEGYTEMITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L D D +I PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFEL-DGTDYVLI--PTAEVPLTNYYRGEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM V+ I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPEDSYDELEKMVVNAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|327356150|gb|EGE85007.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 770 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 8/160 (5%) Query: 11 LQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +QE+ + E A + LR G + S G LP G K + + ++R E + Sbjct: 317 MQEHLKFLEEAEKRNHLRIGKDQDLFFFDEVSPGCPFLLPNGTKIFNALQKLLRSEYLKR 376 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + +W +SG + Y +M +L D + P + +F +S Sbjct: 377 GYQEVQSPNMYDVGIWRQSGHWQHYKDDMFKL-DIEKRTWALKPMNCPGHAIMFGHKERS 435 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 YR LP + R+E G+ R R+F D + F Sbjct: 436 YRELPIRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIF 475 >gi|306832797|ref|ZP_07465932.1| serine--tRNA ligase [Streptococcus bovis ATCC 700338] gi|304425032|gb|EFM28163.1| serine--tRNA ligase [Streptococcus bovis ATCC 700338] Length = 435 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 164 RGAKVTGSRFLFYKGLGARLERAIYNFM------LD--------EHAKEGYTEVIPPYMV 209 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD +D +I PT E +T+ +R I + LP F + Sbjct: 210 NHDSMFGTGQYPKFKEDTFELAD-SDYVLI--PTAEVPLTNYYRGEILDGKELPVYFTAM 266 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +LGL Sbjct: 267 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPETSYDELEKMVANAENILQKLGL- 324 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 325 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 355 >gi|325977535|ref|YP_004287251.1| seryl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177463|emb|CBZ47507.1| serS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 425 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGSRFLFYKGLGARLERAIYNFM------LD--------EHAKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD +D +I PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELAD-SDYVLI--PTAEVPLTNYYRGEILDGKELPVYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +LGL Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPETSYDELEKMVANAENILQKLGL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|170095495|ref|XP_001878968.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646272|gb|EDR10518.1| predicted protein [Laccaria bicolor S238N-H82] Length = 721 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G +LP G + +++ ++R E + G E+ P + ++ LW SG + +Y +M Sbjct: 335 SPGSCFFLPHGTRIYNSLVELMRSEYFKRGYQEVISPNMYNSKLWETSGHWQNYKDDMF- 393 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L D + P + IF S +SY+ LP + + R+E G+ R R Sbjct: 394 LLDVEKEKWALKPMNCPGHCLIFDSRDRSYKELPIRMAEFGIIHRNEASGALTGLTRVRR 453 Query: 155 FLMKDAYSF 163 F+ D + F Sbjct: 454 FVQDDTHVF 462 >gi|68071553|ref|XP_677690.1| aminoacyl-tRNA synthetase [Plasmodium berghei strain ANKA] gi|56497903|emb|CAH98595.1| Bi-functional aminoacyl-tRNA synthetase, putative [Plasmodium berghei] Length = 324 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 11/165 (6%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 S R I+ Y GT ++ F+ +V S+G R + +I D KG Sbjct: 48 SGRAIQAATSHYLGTNFAKMFKIEFEDEQENKQFVHQTSWGC-TTRSIGVMIMIHSDNKG 106 Query: 338 IIWPDSVAPFKISLINI--KAHDQV-----CRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +I P +VA +K ++ I K D+ C+D EK+ +++ C +F D G Sbjct: 107 LILPPNVAKYKAVIVPILYKNSDETAIFNYCKDI-EKVLKN-AQINC-IFDDRDLYSPGY 163 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +F +L G P+++ VG K + ++ R + ++ E V+ Sbjct: 164 KFNHWELRGIPIRIEVGPKDIQNNSCVFVRRDNNQKFNIKKESVL 208 >gi|322517430|ref|ZP_08070303.1| serine--tRNA ligase [Streptococcus vestibularis ATCC 49124] gi|322123912|gb|EFX95471.1| serine--tRNA ligase [Streptococcus vestibularis ATCC 49124] Length = 446 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G EM P + Sbjct: 175 RGAKVTGSRFLFYKGLGAKLERAIYNFM------LD--------EHAKEGYTEMITPYMV 220 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L D D +I PT E +T+ +R I + LP F + Sbjct: 221 NHDSMFGTGQYPKFKEDTFEL-DGTDYVLI--PTAEVPLTNYYRGEILDGKELPIYFTAM 277 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM V+ I +L L Sbjct: 278 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPESSYDELEKMVVNAENILQKLNL- 335 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 336 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 366 >gi|301626888|ref|XP_002942619.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Xenopus (Silurana) tropicalis] Length = 683 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G +LP G + + I+ E + G E+ P + + LW SG ++ YG Sbjct: 342 FFHDLSPGSCFFLPRGAHIYNVLIDFIKSEYRKRGFTEVITPNMYNNKLWETSGHWEHYG 401 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 K M ++ P + +F +S+R LP + R+EL G+ Sbjct: 402 KNMFSFT-VEEETFSLKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGTLSGL 460 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 461 TRVRRFQQDDAHIF 474 >gi|239608840|gb|EEQ85827.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ER-3] Length = 747 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 8/160 (5%) Query: 11 LQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +QE+ + E A + LR G + S G LP G K + + ++R E + Sbjct: 294 MQEHLKFLEEAEKRNHLRIGKDQDLFFFDEVSPGCPFLLPNGTKIFNALQKLLRSEYLKR 353 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + +W +SG + Y +M +L D + P + +F +S Sbjct: 354 GYQEVQSPNMYDVGIWRQSGHWQHYKDDMFKL-DIEKRTWALKPMNCPGHAIMFGHKERS 412 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 YR LP + R+E G+ R R+F D + F Sbjct: 413 YRELPIRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIF 452 >gi|288904563|ref|YP_003429784.1| seryl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|288731288|emb|CBI12838.1| seryl-tRNA synthetase [Streptococcus gallolyticus UCN34] Length = 425 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGSRFLFYKGLGARLERAIYNFM------LD--------EHAKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD +D +I PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELAD-SDYVLI--PTAEVPLTNYYRGEILDGKELPVYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +LGL Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPETSYDELEKMVANAENILQKLGL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|148284343|ref|YP_001248433.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] gi|166225471|sp|A5CD12|SYT_ORITB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146739782|emb|CAM79649.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] Length = 648 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 15/143 (10%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 ++G+ W G + I + R G IE++ P + S LW +SG ++ + + M Sbjct: 260 AQGMPFWHDKGWTIFKIIKNYISCQIQRAGYIEVNTPMVLSQKLWEKSGHWEKFRENMFT 319 Query: 96 L------ADRN--------DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 L D N A+ P + IF IKSYR+LP + R Sbjct: 320 LDTNVAEKDHNLIKDSIETKCALALKPMNCPGHIQIFNYTIKSYRDLPLRMAEFGSCHRY 379 Query: 142 ELR-PRFGVMRSREFLMKDAYSF 163 E +G+MR R F+ DA+ F Sbjct: 380 EPSGALYGLMRVRSFVQDDAHIF 402 >gi|332265240|ref|XP_003281636.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform 1 [Nomascus leucogenys] Length = 793 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y + Sbjct: 406 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 465 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 466 MFTFEIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTR 524 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 525 VRRFQQDDAHIF 536 >gi|254692865|ref|NP_082207.2| threonyl-tRNA synthetase, mitochondrial isoform 1 [Mus musculus] gi|118597388|sp|Q3UQ84|SYTM_MOUSE RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; AltName: Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor gi|74216488|dbj|BAE25159.1| unnamed protein product [Mus musculus] gi|187956085|gb|AAI47502.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus] Length = 723 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 87/409 (21%), Positives = 148/409 (36%), Gaps = 53/409 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + + A IR E R G E+ PTL S LW +SG ++ Y Sbjct: 318 FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTLFSTKLWEQSGHWEHYR 377 Query: 91 KEMLRL----------------ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 +M L A + P + +F +S+R LP Sbjct: 378 ADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFAHRPRSWRELPVRLAD 437 Query: 135 IQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 R E G+ R F DA+ F P + + +LR + + S Sbjct: 438 FGALHRAEASGSLGGLTRLWRFQQDDAHIF-CAPHQLEAEIQGC-LDFLRCVYSVLGFSF 495 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 + + P G F+ GE +++ D + + F + LN Sbjct: 496 HLALSTRPPG------FL-----GEPRLW---DQAEQVLQQALEKFGEPWDLNPGD---G 538 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A Y DVH L D+L + ++ F +Y P A + V Sbjct: 539 AFYGPKIDVH---LHDALGRPHQCGTIQLDFQLPLRFDLQYKGP-------AGTPECPVL 588 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 + +G++ + V+ S GK WP ++P ++ +I ++ + + ++ L Sbjct: 589 IHRAVLGSVERLLGVLAESCGGK---WPLWLSPLQVVVIPVRTEQE---EYARQVQQCLQ 642 Query: 374 KVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G D D G + + A L + Q +VG + S V ++ R Sbjct: 643 AAGLVSDLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQRTVNVRTR 691 >gi|86153772|ref|ZP_01071975.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842733|gb|EAQ59945.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 602 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 4/161 (2%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD +L L T + G+ WL G + + ++ + Sbjct: 195 KEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRL 253 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L AD W SG Y +Y KE + +++ P + I++S ++ Sbjct: 254 RGYEPVRGPELLKADAWKISGHYANY-KENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVR 312 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP F++ + R E G+ R REF DA+ F Sbjct: 313 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIF 353 >gi|227485697|ref|ZP_03916013.1| threonine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227236252|gb|EEI86267.1| threonine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 640 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 89/423 (21%), Positives = 165/423 (39%), Gaps = 52/423 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ G + P G ++ + R+ + +G E+ P + + DLW SG +D Y + Sbjct: 257 HEEGPGFPFFHPNGMILMNELLGWWRDVLDHSGYGEIKTPLILNEDLWHRSGHWDHYKEN 316 Query: 93 M-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M D D A+ V+T R H SYR+LP + R EL G+ Sbjct: 317 MYFTKIDDEDYAIKPMNCPGSVLTYASRQH--SYRDLPIRLAEFGQVHRHELSGTLHGLF 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHE 209 R R F DA+ + L + + Y + ++ L ++ G K ++ + GD+ Sbjct: 375 RVRTFTQDDAHVYCLPSQIKEEVYKMIDLADL-LYSTFGFKYTMELSTRPDDYMGDIKD- 432 Query: 210 FIVLADTGETQVFCSKD--FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 D E Q+ + + +D+ I + F Y D H L Sbjct: 433 ----WDFAEEQLKLALEERGIDYQINPGDGAF----------------YGPKIDFH---L 469 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD---GKDHYVQMGSYGIGAMRV 324 D+ + R + G I + LP + + D K V + +G++ Sbjct: 470 LDA-------AKREWQCGTI---QLDFQLPANFELEYIDENGEKKRPVMLHRALLGSVER 519 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 V+ G+ +W + P ++ +I + D+ D +I + K G V D+ Sbjct: 520 FIGVLTEHFAGRFPLW---INPRQVEVIPVA--DRFA-DKAHEIAKEIEKAGFRVGVDER 573 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI-NYASHRFS 443 E +G + A ++ ++VG K + + +++R +D++L + I + R S Sbjct: 574 SEGVGYKIRSAQMMRTNYMLVVGDKEIESGLLTVRNRDGEETKDVNLADFIAKISEERDS 633 Query: 444 NNR 446 +R Sbjct: 634 KSR 636 >gi|197301753|ref|ZP_03166823.1| hypothetical protein RUMLAC_00479 [Ruminococcus lactaris ATCC 29176] gi|197299193|gb|EDY33723.1| hypothetical protein RUMLAC_00479 [Ruminococcus lactaris ATCC 29176] Length = 655 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 5/159 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIRE-EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ + P G K + + I + E G + P + +DL+ SG +D Y + M Sbjct: 259 QGLPLFPPKGTKMIMKLQRWIEDLEDKEWGYVRTRTPLMAKSDLYKISGHWDHYKEGMFV 318 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 L D ++ P ++++ KSYR+LP+ + FR E G+ R Sbjct: 319 LGDEEKDKEVFALRPMTCPFQYYVYKNTQKSYRDLPYRMSETSTLFRSEDSGEMHGLTRV 378 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 R+F + +A++ + P+ ++ F + LGL+ Sbjct: 379 RQFTITEAHNV-IRPDQAEEELKNCFDLAYYVLSTLGLQ 416 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 15/129 (11%) Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIW--PDSVAPFKISLINIKAHDQVCRDACEK 367 H MG Y R +A +IE + GK W P+ V IS + ++VC Sbjct: 518 HRTSMGCYE----RTLAWLIEK-YAGKFPTWLCPEQVRVLPISEKYEEYANKVC------ 566 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 A L K DV D+ E+IG + A L P ++VG + +D V ++ R G Sbjct: 567 --AELKKNDIDVTVDNRSEKIGFKIREARLDKLPYMLVVGQQEEADGTVSVRSRFAGNEG 624 Query: 428 DMSLEEVIN 436 SL+E I+ Sbjct: 625 TKSLDEFID 633 >gi|127512960|ref|YP_001094157.1| threonyl-tRNA synthetase [Shewanella loihica PV-4] gi|166225499|sp|A3QEK0|SYT_SHELP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|126638255|gb|ABO23898.1| threonyl-tRNA synthetase [Shewanella loihica PV-4] Length = 642 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR++ + E+ P + LW SG +D Y + Sbjct: 256 MQEEAPGMVFWHNDGWSLFLELERFIRQKLGQYTYQEVKGPLMMDRVLWERSGHWDKYSE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + + P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTHSENREYAV-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E + + + G I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQVQQEVSGCIKMVYDTYATFGFHDIVVKLSTRPEKRIGDD 431 >gi|12847728|dbj|BAB27683.1| unnamed protein product [Mus musculus] Length = 723 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 87/409 (21%), Positives = 148/409 (36%), Gaps = 53/409 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + + A IR E R G E+ PTL S LW +SG ++ Y Sbjct: 318 FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTLFSTKLWEQSGHWEHYR 377 Query: 91 KEMLRL----------------ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 +M L A + P + +F +S+R LP Sbjct: 378 ADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFAHRPRSWRELPVRLAD 437 Query: 135 IQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 R E G+ R F DA+ F P + + +LR + + S Sbjct: 438 FGALHRAEASGSLGGLTRLWRFQQDDAHIF-CAPHQLEAEIQGC-LDFLRCVYSVLGFSF 495 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 + + P G F+ GE +++ D + + F + LN Sbjct: 496 HLALSTRPPG------FL-----GEPRLW---DQAEQVLQQALEKFGEPWDLNPGD---G 538 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A Y DVH L D+L + ++ F +Y P A + V Sbjct: 539 AFYGPKIDVH---LHDALGRPHQCGTIQLDFQLPLRFDLQYKGP-------AGTPECPVL 588 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 + +G++ + V+ S GK WP ++P ++ +I ++ + + ++ L Sbjct: 589 IHRAVLGSVERLLGVLAESCGGK---WPLWLSPLQVVVIPVRTEQE---EYARQVQQCLQ 642 Query: 374 KVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G D D G + + A L + Q +VG + S V ++ R Sbjct: 643 AAGLVSDLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQRTVNVRTR 691 >gi|219520186|gb|AAI43944.1| TARSL2 protein [Homo sapiens] Length = 766 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y + Sbjct: 414 FHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSE 473 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M D P + +F +S+R +P F + R+EL G+ Sbjct: 474 NMFTFEIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLT 532 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 533 RVRRFQQDDAHIF 545 >gi|114659237|ref|XP_510628.2| PREDICTED: threonyl-tRNA synthetase-like 2 [Pan troglodytes] Length = 801 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y + Sbjct: 415 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 474 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 475 MFTFEIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTR 533 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 534 VRRFQQDDAHIF 545 >gi|309811262|ref|ZP_07705053.1| threonine--tRNA ligase [Dermacoccus sp. Ellin185] gi|308434802|gb|EFP58643.1| threonine--tRNA ligase [Dermacoccus sp. Ellin185] Length = 665 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 2/156 (1%) Query: 57 IREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTD 116 +R G + P + DL+ SG Y M D + + + + + Sbjct: 296 VRRRHIEEGFSYVGTPHIAKEDLFYTSGHLPYYADGMFPPLDVDGQNYRLKAMNCPMHNE 355 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP F++ +RDE G+ R R D++S+ +TPE + Sbjct: 356 IFRSRGRSYRELPLRFFEFGTVYRDEKSGVLSGLTRVRMITQDDSHSY-VTPEQAPGEIK 414 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 + L + G+ + + + GD +FI Sbjct: 415 HLLDFILGLLRDFGMNDFYLELSTRDVDGDKKDKFI 450 >gi|332844839|ref|XP_003314929.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform 3 [Pan troglodytes] Length = 766 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y Sbjct: 413 FFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYS 472 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M D + P + +F +S+R +P F + R+EL G+ Sbjct: 473 ENMFTFEIEKDTFAL-KPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGL 531 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 532 TRVRRFQQDDAHIF 545 >gi|332251674|ref|XP_003274971.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 1 [Nomascus leucogenys] Length = 723 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 86/416 (20%), Positives = 162/416 (38%), Gaps = 59/416 (14%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 336 HELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSDN 395 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + +F +S+R LP + R+EL G+ R Sbjct: 396 MFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTR 454 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSHE 209 R F DA+ F + K + +LR + + S + + P GD Sbjct: 455 VRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSIFGFSFKLNLSTRPEKFLGD---- 508 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDVH 263 I + D E Q+ EN SLN E+W A Y D+ Sbjct: 509 -IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKIDI- 546 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGA 321 ++ D++ + + ++ F +++L T+ DG D V + +G+ Sbjct: 547 --QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAILGS 596 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGCDV 379 + + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K D+ Sbjct: 597 VERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMADI 650 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 651 DLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 705 >gi|322379034|ref|ZP_08053437.1| threonyl-tRNA synthetase [Helicobacter suis HS1] gi|322380800|ref|ZP_08054906.1| threonyl-tRNA synthetase [Helicobacter suis HS5] gi|321146804|gb|EFX41598.1| threonyl-tRNA synthetase [Helicobacter suis HS5] gi|321148526|gb|EFX43023.1| threonyl-tRNA synthetase [Helicobacter suis HS1] Length = 601 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + + ++ + + G + P + + LW +SG Y +Y KE + Sbjct: 227 GLPIWLPNGMRLRVRLENLLSKALLQYGYEPVRGPEILKSSLWQKSGHYQNY-KENMYFT 285 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + ++ ++SYR LP FY+ + R E G++R REF Sbjct: 286 TIDEVEYGIKPMNCVGHIKVYEHALRSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFT 345 Query: 157 MKDAYSF 163 DA+ F Sbjct: 346 QDDAHIF 352 Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 6/115 (5%) Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G+ A++ + G +P +AP +I+L+ + + DQ+ + ++IY +L+K G Sbjct: 479 LGSFERFIAILTEHYSGN---YPFFIAPVQIALVPV-SMDQL--EYAQEIYHKLNKRGFF 532 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 V D E + + + P V+VG + V+ + I+ R G + M EE Sbjct: 533 VCMADKNETLSKRIRSLEKQKIPFIVVVGKEEVAQGSLAIRDRALGKQYTMLQEE 587 >gi|312277730|gb|ADQ62387.1| Seryl-tRNA synthetase [Streptococcus thermophilus ND03] Length = 425 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G EM P + Sbjct: 154 RGAKVTGSRFLFYKGLGARLERAIYNFM------LD--------EHAKEGYTEMITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L D D +I PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFEL-DGTDYVLI--PTAEVPLTNYYRGEILDGKELPIYFTAL 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM V+ I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPEDSYDELEKMVVNAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|19114946|ref|NP_594034.1| mitochondrial threonine-tRNA ligase [Schizosaccharomyces pombe 972h-] gi|3183172|sp|O13969|SYTM_SCHPO RecName: Full=Probable threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; Flags: Precursor gi|2330792|emb|CAB11266.1| mitochondrial threonine-tRNA ligase [Schizosaccharomyces pombe] Length = 473 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 12/190 (6%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 IA+ + + T ++ + G +LP G + + + +R + G E+ P + DL Sbjct: 51 IAARQKLYTTSIL---TPGSIFFLPHGTRIYNRLVDFLRAQYQIHGFEEIITPLIFKKDL 107 Query: 80 WVESGRYDSYGKEMLRLADRND-----KAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTF 132 W +SG + +Y KE+ R+ + + YG P + ++ S +SY+ LP F Sbjct: 108 WEKSGHWQNYEKEIFRVEESRNVEDEHSNATYGLKPMNCPGHCIVYASTERSYKELPLRF 167 Query: 133 YQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 R+E G+ R R F D + F +PE K +++ LG+ Sbjct: 168 ADFSPLHRNEASGALSGLTRLRCFHQDDGHIF-CSPESIKDEIKNTLTFVKQVYSLLGMN 226 Query: 192 SIPMRAESGP 201 + + + P Sbjct: 227 KLKLYLSTRP 236 >gi|254692871|ref|NP_001157090.1| threonyl-tRNA synthetase, mitochondrial isoform 3 [Mus musculus] Length = 642 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 87/409 (21%), Positives = 148/409 (36%), Gaps = 53/409 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + + A IR E R G E+ PTL S LW +SG ++ Y Sbjct: 237 FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTLFSTKLWEQSGHWEHYR 296 Query: 91 KEMLRL----------------ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 +M L A + P + +F +S+R LP Sbjct: 297 ADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFAHRPRSWRELPVRLAD 356 Query: 135 IQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 R E G+ R F DA+ F P + + +LR + + S Sbjct: 357 FGALHRAEASGSLGGLTRLWRFQQDDAHIF-CAPHQLEAEIQGC-LDFLRCVYSVLGFSF 414 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 + + P G F+ GE +++ D + + F + LN Sbjct: 415 HLALSTRPPG------FL-----GEPRLW---DQAEQVLQQALEKFGEPWDLNPGD---G 457 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A Y DVH L D+L + ++ F +Y P A + V Sbjct: 458 AFYGPKIDVH---LHDALGRPHQCGTIQLDFQLPLRFDLQYKGP-------AGTPECPVL 507 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 + +G++ + V+ S GK WP ++P ++ +I ++ + + ++ L Sbjct: 508 IHRAVLGSVERLLGVLAESCGGK---WPLWLSPLQVVVIPVRTEQE---EYARQVQQCLQ 561 Query: 374 KVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G D D G + + A L + Q +VG + S V ++ R Sbjct: 562 AAGLVSDLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQRTVNVRTR 610 >gi|121612820|ref|YP_999926.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|166223331|sp|A1VXT5|SYT_CAMJJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|87250382|gb|EAQ73340.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] Length = 602 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 4/161 (2%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD +L L T + G+ WL G + + ++ + Sbjct: 195 KEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRL 253 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L AD W SG Y +Y KE + +++ P + I++S ++ Sbjct: 254 RGYEPVRGPELLKADAWKISGHYANY-KENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVR 312 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP F++ + R E G+ R REF DA+ F Sbjct: 313 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIF 353 >gi|297664841|ref|XP_002810829.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Pongo abelii] Length = 139 Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 7/107 (6%) Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACEKIYAR 371 MG YG+G R++AA IE + WP +AP++ LI K + ++ + ++Y Sbjct: 1 MGCYGLGVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEEAASELIGQLYDH 60 Query: 372 LS----KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSD 413 ++ ++ +V DD IG++ A+ G+P +I G + + D Sbjct: 61 ITEAVPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALED 107 >gi|256830760|ref|YP_003159488.1| threonyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] gi|256579936|gb|ACU91072.1| threonyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] Length = 644 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 83/388 (21%), Positives = 145/388 (37%), Gaps = 47/388 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + +E R G + P + DLW SG Y +Y +E + Sbjct: 260 GMAYWHPKGGLVRTILEDFVNKEMIRRGYGIVRTPQILKRDLWETSGHYANY-RENMYFT 318 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++ P + I+ + +SYR+LP ++ + R EL G+MR R+F Sbjct: 319 EIDEVPYGVKPMNCVAHMLIYNTSQRSYRDLPVRLFEFGVVHRHELSGVLHGLMRVRQFT 378 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDLSHEFIVL 213 DA+ P+ + + G + I R E IG D E Sbjct: 379 QDDAHII-CRPDQLLDEIKGVMTWIQDLMGVFGFEYSMEISTRPEKS-IGSDADWE---- 432 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + + M+ P +I E A Y DV KL D L Sbjct: 433 --RATSALMDAMGQMELPY--------------TINEGDGAFYGPKIDV---KLRDCLGR 473 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESS 332 + S ++ F ++ L + G DG+ H M I G++ ++ Sbjct: 474 QWQCSTIQVD----FTLPDRFDL----LYVGEDGERHRPVMVHRAIMGSVERFIGILTEH 525 Query: 333 HDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G +P +AP + ++ + HD+ R K L + G V D E++G + Sbjct: 526 FAGA---FPAWLAPVQARILTVTDNHDEFAR----KCQDALQREGVRVELDLRNEKLGYK 578 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIK 419 A + P +++G + V + V ++ Sbjct: 579 VREAQMEKVPYALVIGDQEVEQACVNVR 606 >gi|254172046|ref|ZP_04878722.1| threonyl-tRNA synthetase [Thermococcus sp. AM4] gi|214033942|gb|EEB74768.1| threonyl-tRNA synthetase [Thermococcus sp. AM4] Length = 624 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 72/331 (21%), Positives = 131/331 (39%), Gaps = 50/331 (15%) Query: 117 IFRSHIKSYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSY 174 I + I SYR+LP Y++ + FR E G+ R R F M D ++ + + + Sbjct: 303 IKKDAIISYRHLPLRMYELTRYSFRREKSGELSGLRRLRAFTMPDMHTVAKDLKQAMDEF 362 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 K + + + +GL D E + ++DF + Sbjct: 363 KKQYKLSMEVLRGVGLTP----------------------DDYEVAIRFTRDFWE----- 395 Query: 235 ENTDF----DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 EN DF II ++E W + D+L + +S I+V + F Sbjct: 396 ENRDFIVELAKIIGKPVLIEMWDQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERF 455 Query: 291 GTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSH----DGKGIIWPDSV 344 G T+ +GK+ Y + + GA+ RV+ A++E GK +P + Sbjct: 456 GI--------TYYDEEGKERYPLILHCSPSGAIERVMYAILEKQAKLQAQGKKPAFPLWL 507 Query: 345 APFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 +P ++ +I + D V D + +L V DD +++ + A+ P + Sbjct: 508 SPIQVRVIPV--SDDVM-DYALYVAGKLEGAKIRVDVDDTNDRLNKKIRKAEKEWIPYII 564 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +VG + V ++ R G + +M LE++I Sbjct: 565 VVGKNEKEQNTVTVRRREDGKQLEMQLEDLI 595 >gi|73748565|ref|YP_307804.1| threonyl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|289432591|ref|YP_003462464.1| threonyl-tRNA synthetase [Dehalococcoides sp. GT] gi|123732511|sp|Q3ZXB5|SYT_DEHSC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73660281|emb|CAI82888.1| threonyl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|288946311|gb|ADC74008.1| threonyl-tRNA synthetase [Dehalococcoides sp. GT] Length = 582 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 8/139 (5%) Query: 32 IHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +HQ G+ +WLP G + ++E + G + P + DLW SG + Y Sbjct: 198 LHQEIGGGLVNWLPNGAIVRHLIEEFWKKEHLKRGYDLVYTPHIAKVDLWKTSGHWGFYR 257 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM 150 + M D + + + P + +F++ +SY+ LP ++ +R E R GV+ Sbjct: 258 ENMYSPMDIDGEEYVLKPMNCVYHILMFKNRTRSYKELPIRMAELGTVYRYE---RSGVL 314 Query: 151 ----RSREFLMKDAYSFDL 165 R R F DA+ F L Sbjct: 315 HGLSRVRGFTQDDAHIFCL 333 >gi|221056250|ref|XP_002259263.1| threonine--trna ligase [Plasmodium knowlesi strain H] gi|193809334|emb|CAQ40036.1| threonine--trna ligase, putative [Plasmodium knowlesi strain H] Length = 888 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G K + + IR E E+ P + S DLW SG Y +Y K+ + Sbjct: 448 SPGSCFWLPHGAKIYNKLVDFIRREYRIRMYDEVITPNVFSCDLWRTSGHYQNY-KDCMF 506 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + K P + +F+ SYR+LP + R+E+ G+ R R Sbjct: 507 IFNVEQKEWGMKPMNCPGHCIMFKQLNASYRSLPIRLADFGVLHRNEISGSLSGLTRVRR 566 Query: 155 FLMKDAYSF 163 F D++ F Sbjct: 567 FQQDDSHIF 575 >gi|146413278|ref|XP_001482610.1| hypothetical protein PGUG_05630 [Meyerozyma guilliermondii ATCC 6260] Length = 685 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 12/168 (7%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHD 334 + RGI+ + GT +S + T + +G D Y S+G+ + RV+ ++ + D Sbjct: 400 TGRGIQGATSHHLGTNFSKMFNITVENPEGADKPKVYGVQTSWGL-STRVIGVMVMTHSD 458 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVC-------RDACEKIYARLSKVGCDVFWDDMGEQ 387 KG++ P VA ++ +I + + D I ARL+ V D Sbjct: 459 NKGLVLPPRVAQTQVVVIPVGLTSKTADDERKGINDGAADIEARLNAADVRVTSDYRDTY 518 Query: 388 I-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +FA +L G PL+V G K ++ +V R G + + L E+ Sbjct: 519 TSGWKFANWELKGVPLRVEFGPKDMAQEQVTAVRRDNGEKYTVKLAEL 566 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 40/81 (49%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + I+S+R+LP Q R E + +R+REFL ++ ++ LT Sbjct: 288 PTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTVHLTD 347 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 + + K+ Y +I+ L Sbjct: 348 KEADEQVMKILDLYTKIYEEL 368 >gi|16552114|dbj|BAB71241.1| unnamed protein product [Homo sapiens] Length = 707 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y + Sbjct: 320 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 379 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 380 MFTFEIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTR 438 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 439 VRRFQQDDAHIF 450 >gi|38570111|ref|NP_689547.2| probable threonyl-tRNA synthetase 2, cytoplasmic [Homo sapiens] gi|189083596|sp|A2RTX5|SYTC2_HUMAN RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; AltName: Full=Threonyl-tRNA synthetase-like protein 2 gi|119622721|gb|EAX02316.1| threonyl-tRNA synthetase-like 2 [Homo sapiens] gi|124376838|gb|AAI32672.1| Threonyl-tRNA synthetase-like 2 [Homo sapiens] gi|187953219|gb|AAI36316.1| Threonyl-tRNA synthetase-like 2 [Homo sapiens] Length = 802 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y + Sbjct: 415 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 474 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 475 MFTFEIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTR 533 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 534 VRRFQQDDAHIF 545 >gi|86149734|ref|ZP_01067964.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840002|gb|EAQ57261.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] Length = 602 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 4/161 (2%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L I++E RD +L L T + G+ WL G + + ++ + Sbjct: 195 KEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRL 253 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L AD W SG Y +Y KE + +++ P + I++S ++ Sbjct: 254 RGYEPVRGPELLKADAWKISGHYANY-KENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVR 312 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 SYR+LP F++ + R E G+ R REF DA+ F Sbjct: 313 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIF 353 >gi|306825809|ref|ZP_07459148.1| serine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432170|gb|EFM35147.1| serine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 424 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELKDTN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|300708012|ref|XP_002996195.1| hypothetical protein NCER_100753 [Nosema ceranae BRL01] gi|239605474|gb|EEQ82524.1| hypothetical protein NCER_100753 [Nosema ceranae BRL01] Length = 499 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 63/334 (18%), Positives = 129/334 (38%), Gaps = 67/334 (20%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM F I S+R+LP Q R ELR ++RS+E L ++ ++ + Sbjct: 112 PTSETVMYPSFARWISSHRDLPLKVNQWCNILRWELRGTTPLIRSKEILWQEGHTAHIDK 171 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E + + Y R++ L ++P ++ ET+ F D+ Sbjct: 172 EEADKEVLDILDLYYRMYKEL--LAVP----------------VIKGLKTETEKFAGSDY 213 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 ++ VE + +P+ + +GI+ Sbjct: 214 ------------------STTVEGF------------------IPQ----AGKGIQAATS 233 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + G +S + DG +V S+G+ + AV+ S D KG++ P VA Sbjct: 234 HHLGQNFSKMFDVKVQVDDGVSDFVYQNSWGMTTRSLGIAVMIHS-DDKGLVLPPKVAKI 292 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFW--------DDMGEQIGSQFAVADLLG 399 ++ +I + + K+ ++++ + D +G +F ++ G Sbjct: 293 QVVIIPCGLSVKTSTEDKNKLLKVINRIKNQLLLSKIRVHIDDRDNVTVGYKFNHWEIRG 352 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 P+++ +G K + +++ I R TG + ++++ Sbjct: 353 VPIRIEIGLKDLEKNEMCIYKRNTGTKNQYTIDD 386 >gi|148706886|gb|EDL38833.1| threonyl-tRNA synthetase-like 1 [Mus musculus] Length = 630 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 87/409 (21%), Positives = 148/409 (36%), Gaps = 53/409 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + + A IR E R G E+ PTL S LW +SG ++ Y Sbjct: 225 FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTLFSTKLWEQSGHWEHYR 284 Query: 91 KEMLRL----------------ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 +M L A + P + +F +S+R LP Sbjct: 285 ADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFAHRPRSWRELPVRLAD 344 Query: 135 IQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 R E G+ R F DA+ F P + + +LR + + S Sbjct: 345 FGALHRAEASGSLGGLTRLWRFQQDDAHIF-CAPHQLEAEIQGC-LDFLRCVYSVLGFSF 402 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 + + P G F+ GE +++ D + + F + LN Sbjct: 403 HLALSTRPPG------FL-----GEPRLW---DQAEQVLQQALEKFGEPWDLNPGD---G 445 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A Y DVH L D+L + ++ F +Y P A + V Sbjct: 446 AFYGPKIDVH---LHDALGRPHQCGTIQLDFQLPLRFDLQYKGP-------AGTPECPVL 495 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 + +G++ + V+ S GK WP ++P ++ +I ++ + + ++ L Sbjct: 496 IHRAVLGSVERLLGVLAESCGGK---WPLWLSPLQVVVIPVRTEQE---EYARQVQQCLQ 549 Query: 374 KVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G D D G + + A L + Q +VG + S V ++ R Sbjct: 550 AAGLVSDLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQRTVNVRTR 598 >gi|114659235|ref|XP_001144545.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform 2 [Pan troglodytes] Length = 802 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y + Sbjct: 415 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 474 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 475 MFTFEIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTR 533 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 534 VRRFQQDDAHIF 545 >gi|194336185|ref|YP_002017979.1| prolyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|259511610|sp|B4SG51|SYP_PELPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|194308662|gb|ACF43362.1| prolyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 481 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 3/159 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++ ++ G G ++ F+ DG YV S+G+ + R++ A+I + D +G+ Sbjct: 219 SKALQAGTSHNLGQNFAKAFDCQFQTKDGVLDYVWATSWGV-STRLIGALIMAHSDDRGL 277 Query: 339 IWPDSVAPFKISLINIKAHDQVCR-DACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVAD 396 + P +A ++ +I I D+ + + L+K G F D + G +FA + Sbjct: 278 VLPPKLATRQVVIIPILRGDKAAVIERANALAQELNKNGIPSFVDSSEQNSPGWKFAEYE 337 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 L G P+++ +G + + R T + +++L+E + Sbjct: 338 LQGIPIRIELGPRDIEKGICIAARRDTLEKTELALDETL 376 Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ I+SYR+LP Q R E+R R +R+ EFL ++ ++ P Sbjct: 108 PTSETIIWSSYKKWIQSYRDLPILINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHANP 166 Query: 168 EGSKHSYNKMFVSY 181 E S+ +M Y Sbjct: 167 EESQEEVLRMINVY 180 >gi|332265242|ref|XP_003281637.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform 2 [Nomascus leucogenys] Length = 713 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 87/415 (20%), Positives = 160/415 (38%), Gaps = 55/415 (13%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y + Sbjct: 326 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 385 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 386 MFTFEIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTR 444 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--GDLSHE 209 R F DA+ F T E + ++ G S + + P G+ Sbjct: 445 VRRFQQDDAHIF-CTVEQIEEEIKGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGE---- 498 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 I + + E Q+ S MDF P + D A Y D+ K+ D Sbjct: 499 -IEMWNEAEKQLQSS--LMDFGEPWKMNPGDG------------AFYGPKIDI---KIKD 540 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 ++ + + ++ F +++L + K D K V + +G++ + A++ Sbjct: 541 AIGRYHQCATIQLD----FQLPVRFNLTYVS--KDGDDKKRPVIIHRAILGSVERMIAIL 594 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD------- 382 ++ GK WP ++P ++ +I + ACEK YA +V + F + Sbjct: 595 SENYGGK---WPFWLSPHQVMVIPVGP-------ACEK-YAL--QVSSEFFEEGFMADVD 641 Query: 383 -DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D + + A L + ++VG K ++ V ++ R I ++ + I+ Sbjct: 642 LDHNCTLNKKIRNAQLAQYNFILVVGEKEKVNNAVNVRTRDNKIHGEILVTSAID 696 >gi|190348971|gb|EDK41532.2| hypothetical protein PGUG_05630 [Meyerozyma guilliermondii ATCC 6260] Length = 685 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 12/168 (7%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHD 334 + RGI+ + GT +S + T + +G D Y S+G+ + RV+ ++ + D Sbjct: 400 TGRGIQGATSHHLGTNFSKMFNITVENPEGADKPKVYGVQTSWGL-STRVIGVMVMTHSD 458 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVC-------RDACEKIYARLSKVGCDVFWDDMGEQ 387 KG++ P VA ++ +I + + D I ARL+ V D Sbjct: 459 NKGLVLPPRVAQTQVVVIPVGLTSKTADDERKGINDGAADIEARLNAADVRVTSDYRDTY 518 Query: 388 I-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +FA +L G PL+V G K ++ +V R G + + L E+ Sbjct: 519 TSGWKFANWELKGVPLRVEFGPKDMAQEQVTAVRRDNGEKYTVKLAEL 566 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 40/81 (49%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + I+S+R+LP Q R E + +R+REFL ++ ++ LT Sbjct: 288 PTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTVHLTD 347 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 + + K+ Y +I+ L Sbjct: 348 KEADEQVMKILDLYTKIYEEL 368 >gi|55736407|gb|AAV60049.1| seryl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|55738291|gb|AAV61932.1| seryl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] Length = 446 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G EM P + Sbjct: 175 RGAKVTGSRFLFYKGLGARLERAIYNFM------LD--------EHAKEGYTEMITPYMV 220 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L D D +I PT E +T+ +R I + LP F + Sbjct: 221 NHDSMFGTGQYPKFKEDTFEL-DGTDYVLI--PTAEVPLTNYYRGEILDGKELPIYFTAL 277 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM V+ I +L L Sbjct: 278 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPEDSYDELEKMVVNAENILQKLNL- 335 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 336 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 366 >gi|149027310|gb|EDL82977.1| threonyl-tRNA synthetase, isoform CRA_a [Rattus norvegicus] Length = 722 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 84/416 (20%), Positives = 162/416 (38%), Gaps = 57/416 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y + Sbjct: 334 FHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSE 393 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M ++ + P + +F +S+R LP + R+EL G+ Sbjct: 394 NMFSFEVEKEQFAL-KPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLT 452 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLSH 208 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 453 RVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD--- 507 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSDV 262 I + + E Q+ EN SLN E+W A Y D+ Sbjct: 508 --IEIWNQAEKQL-------------EN-------SLNEFGEKWELNPGDGAFYGPKIDI 545 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIG 320 ++ D++ + + ++ F +++L T+ DG D V + +G Sbjct: 546 ---QIKDAIGRYHQCATIQLD----FQLPIRFNL----TYVSHDGDDKKRPVIVHRAILG 594 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ + A++ ++ GK WP ++P ++ ++ + C + +K+ V Sbjct: 595 SVERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQEFHDAKFMVD 648 Query: 381 WD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G + + A L + ++VG K + V I+ R + + ++ E + Sbjct: 649 IDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVGETV 704 >gi|147669325|ref|YP_001214143.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Dehalococcoides sp. BAV1] gi|189083604|sp|A5FRB3|SYT_DEHSB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146270273|gb|ABQ17265.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Dehalococcoides sp. BAV1] Length = 582 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 8/139 (5%) Query: 32 IHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +HQ G+ +WLP G + ++E + G + P + DLW SG + Y Sbjct: 198 LHQEIGGGLVNWLPNGAIVRHLIEEFWKKEHLKRGYDLVYTPHIAKVDLWKTSGHWGFYR 257 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM 150 + M D + + + P + +F++ +SY+ LP ++ +R E R GV+ Sbjct: 258 ENMYSPMDIDGEEYVLKPMNCVYHILMFKNRTRSYKELPIRMAELGTVYRYE---RSGVL 314 Query: 151 ----RSREFLMKDAYSFDL 165 R R F DA+ F L Sbjct: 315 HGLSRVRGFTQDDAHIFCL 333 >gi|320165002|gb|EFW41901.1| Tarsl2 protein [Capsaspora owczarzaki ATCC 30864] Length = 777 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/216 (22%), Positives = 78/216 (36%), Gaps = 32/216 (14%) Query: 17 DAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +A++ H+L+ + M H +S G LP G K + + IR G E+S P Sbjct: 322 EAKLRDHRLIGAAQQLFMFHPYSPGSAFMLPHGMKIISRLQEYIRLAYIHYGYQEVSTPI 381 Query: 74 LQSADLWVESGRYDSYGKEMLRLAD---------------------------RNDKAMIY 106 + S +LW SG Y ++M + +D Sbjct: 382 VYSKELWETSGHLQHYAQDMFAVTGGLTPAAPAAGAAAGAAGHSHHHADSDASSDATQAL 441 Query: 107 GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDL 165 P + IF+ SYR LP R+E + G+ R R F DA+ F Sbjct: 442 KPMNCPGHCLIFQRKHYSYRELPIRLADFSPLHRNEAKGALSGLTRVRRFHQDDAHIF-C 500 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 TPE + + ++ RLG ++ + P Sbjct: 501 TPEQIQAEILNVLGFVREVYGRLGFSEFTLKLSTRP 536 >gi|91087799|ref|XP_967345.1| PREDICTED: similar to RH56418p [Tribolium castaneum] Length = 707 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G + P G + + I++E + G E+ P + +A LW SG + Y Sbjct: 320 FFHELSPGSCFFQPRGAHIYNTLINFIKKEYRKRGFQEVISPNIFNAKLWQVSGHWAHYA 379 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M DK + P + IF + +S+R LP + R+EL G+ Sbjct: 380 DNMFSFDVEKDKFAL-KPMNCPGHCLIFDNRTRSWRELPLRLADFGVLHRNELSGALTGL 438 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 439 TRVRRFQQDDAHIF 452 >gi|217077729|ref|YP_002335447.1| threonyl-tRNA synthetase [Thermosipho africanus TCF52B] gi|217037584|gb|ACJ76106.1| threonyl-tRNA synthetase [Thermosipho africanus TCF52B] Length = 636 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ +LP G L+ + + R+ G E+ P + + LW +SG +D Y K+ + Sbjct: 261 AAGMPIFLPKGATILNELMSFSRQLHKEYGYKEVMTPLIMNVKLWHQSGHWDHY-KDNMY 319 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 ++ + P + I+++ + SYR+LP ++ R E G++R R Sbjct: 320 FTEKEETEYAVKPMNCPGHILIYKNDVVSYRDLPIRLFEFGKVHRYERSGVLHGLLRVRA 379 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 380 FTQDDAHIF 388 >gi|161611297|ref|YP_138864.2| seryl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|161936380|ref|YP_140747.2| seryl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] Length = 425 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G EM P + Sbjct: 154 RGAKVTGSRFLFYKGLGARLERAIYNFM------LD--------EHAKEGYTEMITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L D D +I PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFEL-DGTDYVLI--PTAEVPLTNYYRGEILDGKELPIYFTAL 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM V+ I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPEDSYDELEKMVVNAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|88608148|ref|YP_506185.1| threonyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] gi|123763729|sp|Q2GEB1|SYT_NEOSM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|88600317|gb|ABD45785.1| threonyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] Length = 637 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 5/172 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + ++G W G + IR + G E+ P + + LW SG + + K Sbjct: 258 LQEEAQGQVFWHENGFILYRVLENYIRNKLKTHGYREVKTPLVYNKCLWERSGHWSKF-K 316 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 E + + +D P + ++++ +KSYR+LP + + R+E G+M Sbjct: 317 ENMFVIRSDDGEFSLKPMNCPAHIEVYKQSLKSYRDLPLRLAEFGMCHRNEASGALHGLM 376 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSIPMRAESGP 201 R R F+ DA+ F TP+ F L+ ++ LG + +R P Sbjct: 377 RVRGFVQDDAHIF-CTPQ-QICDETIAFCGLLKEVYRDLGFTEVEVRFSDRP 426 >gi|251792477|ref|YP_003007203.1| threonyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] gi|247533870|gb|ACS97116.1| threonyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] Length = 643 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 83/421 (19%), Positives = 155/421 (36%), Gaps = 50/421 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +YG Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIRMVYDIYSTFGFTNIFVKLSTRPEKRIGADDM 433 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + C+++ + + +++ I E A Y + Sbjct: 434 WD-------------CAEEGLANALKHNGLEYE-------IQEGEGAFYGPKIEFALRDC 473 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D R + G I ++LP ++A++ D M I G++ Sbjct: 474 LD----------REWQCGTI---QLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDD 383 +I + G +P +AP + ++NI + + +D +K LS G V D Sbjct: 521 FIGIITEEYAG---FFPAWLAPTQAVVMNITDSQSEYVQDVAKK----LSDAGLRVKTDL 573 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E++G + L P ++ G K + KV ++ R ++EE ++ + Sbjct: 574 RNEKVGFKIREHTLRRVPYMLVCGDKEIETGKVAVRTRKGQDLGTFTVEEFLDVLKKQVR 633 Query: 444 N 444 N Sbjct: 634 N 634 >gi|254565877|ref|XP_002490049.1| Protein of unknown function that may interact with ribosomes, based on co-purification experiments [Pichia pastoris GS115] gi|238029845|emb|CAY67768.1| Protein of unknown function that may interact with ribosomes, based on co-purification experiments [Pichia pastoris GS115] gi|328350453|emb|CCA36853.1| prolyl-tRNA synthetase [Pichia pastoris CBS 7435] Length = 677 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 17/199 (8%) Query: 250 EQWTAPYAATSDVHNEK----LFDSLPENK-RVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E P NEK LF + E + RGI+ G +S + + + Sbjct: 359 ELLAVPVVKGKKTENEKFAGGLFTTTCEGYIPTTGRGIQGATSHCLGQNFSKMFNISVEN 418 Query: 305 ADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG D + S+G+ + RV+ ++ D KG++ P V+ +++ +I + + Sbjct: 419 PDGADKPKLFAWQNSWGL-STRVIGVMVMVHSDNKGLVIPPRVSQYQVIVIPVGITSKTT 477 Query: 362 RDACEKIYARLSKVGCDVFWDDM--------GEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 ++ +KI A +K+ + +D+ G +F+ A+L G PL++ VG + + Sbjct: 478 KEEEQKILATCNKIEGKLRQNDLRVTSDYRTNYSPGWKFSNAELKGIPLRIEVGPRDLQK 537 Query: 414 SKVEIKHRLTGIREDMSLE 432 + V R + +SL+ Sbjct: 538 NTVVAVRRDDFTKTTISLD 556 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 40/81 (49%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + I+S+R+LP Q R E + +R+REFL ++ ++ LT Sbjct: 280 PTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTAHLTF 339 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 E + ++ Y+ I+ L Sbjct: 340 EEANKEVLQILDYYVGIYEEL 360 >gi|270009374|gb|EFA05822.1| hypothetical protein TcasGA2_TC008604 [Tribolium castaneum] Length = 685 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G + P G + + I++E + G E+ P + +A LW SG + Y Sbjct: 298 FFHELSPGSCFFQPRGAHIYNTLINFIKKEYRKRGFQEVISPNIFNAKLWQVSGHWAHYA 357 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M DK + P + IF + +S+R LP + R+EL G+ Sbjct: 358 DNMFSFDVEKDKFAL-KPMNCPGHCLIFDNRTRSWRELPLRLADFGVLHRNELSGALTGL 416 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 417 TRVRRFQQDDAHIF 430 >gi|114659241|ref|XP_001144153.1| PREDICTED: hypothetical protein [Pan troglodytes] gi|332844841|ref|XP_001144319.2| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform 1 [Pan troglodytes] Length = 707 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y + Sbjct: 320 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 379 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 380 MFTFEIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTR 438 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 439 VRRFQQDDAHIF 450 >gi|57168347|ref|ZP_00367481.1| threonyl-tRNA synthetase [Campylobacter coli RM2228] gi|57020155|gb|EAL56829.1| threonyl-tRNA synthetase [Campylobacter coli RM2228] Length = 602 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WL G + + ++ + G + P L AD W SG Y +Y KE + Sbjct: 228 GLPIWLSNGARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANY-KENMYFT 286 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + I++S ++SYR+LP F++ + R E G+ R REF Sbjct: 287 QIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFT 346 Query: 157 MKDAYSF 163 DA+ F Sbjct: 347 QDDAHIF 353 >gi|218288750|ref|ZP_03493013.1| prolyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218241108|gb|EED08284.1| prolyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 483 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 6/169 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R ++ Y G ++ + D + YV S+G+ + R++ A++ D +G++ Sbjct: 227 RALQTATSHYLGQNFAKSFEIQYLDKDNQLKYVYTTSWGM-STRILGAIVMVHGDDRGLV 285 Query: 340 WPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVA 395 P +AP ++ ++ I KA + V A + A L + V DD + G +F Sbjct: 286 LPPKLAPTQVVVVPIGPAKAREAVVAKARDLAEA-LRRADIRVHLDDRDDVSPGWKFNEY 344 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +L G P+++ +G + + S+ + R TG + + L+ VI S+ Sbjct: 345 ELRGVPIRLELGPRDLEASQAVLARRDTGEKITVPLDGVIERVQALLSD 393 >gi|257077256|ref|ZP_05571617.1| glycyl-tRNA synthetase [Ferroplasma acidarmanus fer1] Length = 474 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 69/129 (53%), Gaps = 6/129 (4%) Query: 311 YVQMGSYGIG--AMRVVAAVIESSHDGKGII-WPDSVAPFKISLINIKAHDQVCRDACEK 367 YV SYGI + ++A +E+ DGK ++ P VAP+ ++ + + + ++ E Sbjct: 338 YVIEPSYGIDRILLTLMAQSLET-RDGKNVLKIPYPVAPYHFAVFPLMKKENL-KEKAEY 395 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IY + K + +D+ G IG ++A D +G P + V + + D+ V ++ R T ++ Sbjct: 396 IYENMKKQDKYIVYDEAG-TIGKRYARQDEIGTPYCITVDYQTLEDNTVTVRSRDTAEQK 454 Query: 428 DMSLEEVIN 436 + +EE+++ Sbjct: 455 RIKIEELLD 463 >gi|330802268|ref|XP_003289141.1| hypothetical protein DICPUDRAFT_35169 [Dictyostelium purpureum] gi|325080808|gb|EGC34348.1| hypothetical protein DICPUDRAFT_35169 [Dictyostelium purpureum] Length = 679 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 8/158 (5%) Query: 16 RDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 + A + H+L+ + H S G +LP G K + + +R E R G E+ P Sbjct: 268 KKASLRDHRLIGKNQELFFFHPFSPGSCFFLPHGTKIYNKLLNFLRSEYRRRGYQEVITP 327 Query: 73 TLQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 + S LW +SG + +Y M D ++ P + +F +SY+ LP Sbjct: 328 NIYSQKLWEQSGHWQNYKDNMFSFECDHTHYSL--KPMNCPGHCLMFAHRQRSYKELPMR 385 Query: 132 FYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 + R+E G+ R R F DA+ F TP+ Sbjct: 386 IADFGVLHRNESHGSLTGLTRVRRFQQDDAHIF-CTPD 422 >gi|47220882|emb|CAG03089.1| unnamed protein product [Tetraodon nigroviridis] Length = 1638 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 74/339 (21%), Positives = 124/339 (36%), Gaps = 45/339 (13%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + ++S+R+LP Q R E + +R+REFL ++ ++ T Sbjct: 1218 PTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHTAFATK 1277 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E + ++ Y R++ L +IP +V E + F D+ Sbjct: 1278 EEAAEEVLQILDLYARVYEE--LMAIP----------------VVKGRKTEKEKFAGGDY 1319 Query: 228 MDFPIPSENTDFDDIISLN--SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 T + IS + +I P A + D P + +G Sbjct: 1320 --------TTTVEAFISASGRAIQVPGAPPSGAPEGLWWGAAADEAPA---LCPQGATSH 1368 Query: 286 HIFYFGTKYSLPMSATFKGAD--GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDS 343 H+ G +S F+ G+ S+GI R + + D KG++ P Sbjct: 1369 HL---GQNFSKMFEIVFEDPKKPGEKQLAFQNSWGI-TTRTIGVLTMVHGDNKGLVLPPR 1424 Query: 344 VAPFKISLINI-------KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVA 395 VA ++ +I +A Q C K L + G V D G +F Sbjct: 1425 VACLQVVIIPCGITASLPEADRQALLAQCAKYQDHLQRAGVRVKSDLRDNYSPGWKFNHW 1484 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +L G P+++ VG K + + R TG + + EV Sbjct: 1485 ELKGVPVRLEVGPKDLQQRQCVAVRRDTGAKLTVPEAEV 1523 >gi|159036838|ref|YP_001536091.1| prolyl-tRNA synthetase [Salinispora arenicola CNS-205] gi|157915673|gb|ABV97100.1| prolyl-tRNA synthetase [Salinispora arenicola CNS-205] Length = 468 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 9/97 (9%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 ++ PT E V+ + I SYR+LP Q R ELRPR +R+ EFL ++ ++ Sbjct: 104 VVVRPTSETVIGEFMAKWIDSYRDLPLLLNQWANVVRWELRPRI-FLRTSEFLWQEGHTA 162 Query: 164 DLTPEGSK--------HSYNKMFVSYLRIFHRLGLKS 192 T + ++ +Y + V+ L I ++GLK+ Sbjct: 163 HATRQDARAYARKILHEAYEDLMVNVLAIPVQVGLKT 199 >gi|320593564|gb|EFX05973.1| prolyl-tRNA synthetase [Grosmannia clavigera kw1407] Length = 554 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 7/173 (4%) Query: 23 HKLMLRTGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSA-DL 79 +++L+ MI +++ G Y P + + ++ G E S P SA L Sbjct: 62 QEVVLKAEMIEYYNEIAGFYILRPASMYIWNVIRKWFQQRIEHMGVEETSFPMFLSAKSL 121 Query: 80 WVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 E + + E+ + DK + PT E VM + I+S+R+LP Q Sbjct: 122 EKEKDHVEGFAPELAWVTKAGDKDLEVPVAVRPTSEAVMYPYYSKWIRSHRDLPLRLNQW 181 Query: 136 QLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 R E + +R+REFL ++ ++ LT E + ++ Y ++ +L Sbjct: 182 NSVVRWEAKQTTPFLRAREFLWQEGHTAHLTEELAGEEVLEILELYAGVYEQL 234 >gi|319947603|ref|ZP_08021833.1| serine--tRNA ligase [Streptococcus australis ATCC 700641] gi|319746291|gb|EFV98554.1| serine--tRNA ligase [Streptococcus australis ATCC 700641] Length = 446 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 175 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 220 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 221 NHDSMFGTGQYPKFKEDTFELSDTN---YVLIPTAEVPLTNYYRDEIIDGKDLPIYFTAM 277 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 278 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 336 Query: 192 SIPMRAESGPIG 203 M +G +G Sbjct: 337 YRVMALSTGDMG 348 >gi|294056086|ref|YP_003549744.1| prolyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] gi|293615419|gb|ADE55574.1| prolyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] Length = 506 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 73/344 (21%), Positives = 131/344 (38%), Gaps = 73/344 (21%) Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D GK L+ A ++ +I PT E ++ ++F ++SYR+LP Q R E+R R Sbjct: 105 DEDGK--LQPAGPLEEPLIVRPTSETIIGELFSKWVQSYRDLPLLINQWANVVRWEMRTR 162 Query: 147 FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 +R+ EFL ++ ++ T E + KM Y D Sbjct: 163 L-FLRTAEFLWQEGHTVHATSEEAMEETRKMLEVY----------------------ADF 199 Query: 207 SHEFIVL-ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 + ++ + TGE + FP D ++ ++++ A A TS + Sbjct: 200 AESYMAMPVITGE-----KTEAERFP------GADATFAIEAMMQDRKALQAGTSHFLGQ 248 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 F + K +SA G E Y S+G+ + R+V Sbjct: 249 N-FAKSSDIKYLSAEGKE--------------------------EYAWTTSWGV-STRLV 280 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVG-----C 377 +I + D G++ P +AP + +I + + Q D C ++ +L Sbjct: 281 GGLIMTHSDDDGLVLPPRIAPSHVVIIPVTPKEETRQQVLDYCLELKQQLEAQSFLDGRV 340 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 V +DD + G + G P++V VG + + + V + R Sbjct: 341 KVEFDDRDMRGGEKAWGWIKKGIPVRVEVGPRDMENGSVFVGRR 384 >gi|313899489|ref|ZP_07832999.1| threonine--tRNA ligase [Clostridium sp. HGF2] gi|312955777|gb|EFR37435.1| threonine--tRNA ligase [Clostridium sp. HGF2] Length = 579 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 86/415 (20%), Positives = 161/415 (38%), Gaps = 53/415 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ + + G+ +LP G + + EE + + P + S +LW SG +++Y Sbjct: 196 MMSEFAPGMPFFLPNGMIIRNLLENFWYEEHTKENYQFIKTPIMMSKELWEVSGHWENY- 254 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +D+ P + +F++ + SY++LP ++ R E G+ Sbjct: 255 KENMYTTMVDDREFAIKPMNCPGSLLVFKNGLHSYKDLPLRMGELGQVHRHEASGALNGL 314 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 R R F DA+ F + P+ + ++ R++ GL + R E I GDL Sbjct: 315 FRVRTFTQDDAHIF-MRPDQIESEVMQLIQFIDRVYSVFGLSYRIELSTRPEKKYI-GDL 372 Query: 207 S---HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 + LAD C D+ + + F Y D H Sbjct: 373 AIWEQSEKALADA------CVHAGKDYKVNPGDGAF----------------YGPKLDFH 410 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + DSL R + G I +LP T+ DG K V + G Sbjct: 411 ---IKDSL-------GREWQCGTI---QLDMNLPERFDLTYVEKDGSKVRPVMLHRVIFG 457 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ G +W +AP ++S++ + H + +++ +L +G Sbjct: 458 SIERFIGILIEHFAGHFPVW---LAPQQVSVVPV--HHEKHLGYANEVHEKLCALGFRSK 512 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E++G + A L P Q+++G + + V ++ + MSL++ I Sbjct: 513 LDARNEKLGYRIREAQLSKIPYQLVIGDGEIENRSVTLRRAQSRESITMSLDDFI 567 >gi|297697604|ref|XP_002825941.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like [Pongo abelii] Length = 707 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y + Sbjct: 320 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 379 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 380 MFTFEIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTR 438 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 439 VRRFQQDDAHIF 450 >gi|325188237|emb|CCA22777.1| unnamed protein product [Albugo laibachii Nc14] Length = 756 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G WLP G + +R + G E+ P + + +LW SG Y Sbjct: 371 FFHSLSPGSAFWLPNGAHIFSKLLEFLRAQYRERGYNEVITPNMFNMELWNTSGHAAHY- 429 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + + + + P + +F ++SYR LP + + R+EL G+ Sbjct: 430 KENMFVFEVESQEFALKPMNCPSHCLMFDHRLRSYRELPIRYADFGVLHRNELSGALTGL 489 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 490 TRVRRFQQDDAHIF 503 >gi|194335337|ref|YP_002017131.1| threonyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|238693365|sp|B4SB93|SYT_PELPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194307814|gb|ACF42514.1| threonyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 657 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 6/132 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + + ++EEQ + G + + P + + +L+ SG Y Y L Sbjct: 273 GLPIWLPKGAIIRNELETFLKEEQRKRGYLPVYTPHIGNIELYKRSGHYPYYSDSQFPPL 332 Query: 95 RLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D K Y P + I+ S ++SYR+LP + +R E G++R Sbjct: 333 TYHDEEGKQEQYLLKPMNCPHHHLIYSSKMRSYRDLPLRLTEFGTVYRHEQSGELNGLVR 392 Query: 152 SREFLMKDAYSF 163 +R F D++ + Sbjct: 393 ARGFTQDDSHIY 404 >gi|313665217|ref|YP_004047088.1| proline--tRNA ligase [Mycoplasma leachii PG50] gi|312949831|gb|ADR24427.1| proline--tRNA ligase [Mycoplasma leachii PG50] Length = 474 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 84/420 (20%), Positives = 163/420 (38%), Gaps = 82/420 (19%) Query: 15 PRDAEIAS--HKLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 PR+ + + ++L T + S KG + P G + + + + EE + + Sbjct: 10 PRNIDFSQWYTDIVLNTKLASYGSVKGTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYF 69 Query: 72 PTLQSADLW-VESGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 P L L+ E D + E+ + + ++ + PT E +M D F + I SYR Sbjct: 70 PLLIPESLFNKEKDHIDGFSPEIATVTRVGQKKLEENLFIRPTSEVLMMDYFSNEINSYR 129 Query: 127 NLPFTFYQIQ--LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 +LP + Q +++ RP +R+ EFL ++ ++ SYN+ L+I Sbjct: 130 DLPLIYNQWCNVMRWEKTTRP---FLRTIEFLWQEGHTV-------HSSYNEAENFCLKI 179 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 I + E ++L V C K +E F Sbjct: 180 LD---------------IYEKFAKEVLLLP------VICGK-------KTEKEKF----- 206 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A D + E+ + ++ G +F ++ F+ Sbjct: 207 ------------AGAKDTYT-------IESLMFDGQALQCGTSHFFADNFTKVYDIKFQN 247 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDS---VAPFKISLINIKAHDQVC 361 + K + S+G+ R++ A+I + D G++ P + I + NI+ DQV Sbjct: 248 KENKLEHAYSTSWGVST-RLIGALIMTHSDDNGLVLPSKIAPIQIQIIQIKNIEQIDQV- 305 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E I +LS DV D+ + G + + A++ G P+++ +G + + ++++ I R Sbjct: 306 ---VENIKEKLSDYRIDV--DNSDKSFGFKISEAEIKGIPIRIEIGPRDLENNQITISRR 360 >gi|305432763|ref|ZP_07401922.1| threonine--tRNA ligase [Campylobacter coli JV20] gi|304444160|gb|EFM36814.1| threonine--tRNA ligase [Campylobacter coli JV20] Length = 610 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 2/127 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WL G + + ++ + G + P L AD W SG Y +Y KE + Sbjct: 236 GLPIWLSNGARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANY-KENMYFT 294 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + I++S ++SYR+LP F++ + R E G+ R REF Sbjct: 295 QIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFT 354 Query: 157 MKDAYSF 163 DA+ F Sbjct: 355 QDDAHIF 361 >gi|254468875|ref|ZP_05082281.1| threonyl-tRNA synthetase [beta proteobacterium KB13] gi|207087685|gb|EDZ64968.1| threonyl-tRNA synthetase [beta proteobacterium KB13] Length = 652 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 24/185 (12%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H+KG W + +R++ G E+ PT+ LW +SG +++Y Sbjct: 278 GMVFWHAKGWSLW--------QEIENYMRKKFVDYGYQEIKTPTVLDKTLWEKSGHWENY 329 Query: 90 GKEM-LRLADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 + M + ++ D A+ + P H IF + SYR LP + R+E Sbjct: 330 HENMFITHSEHRDYAVKPMNCPGH----VQIFNHSLHSYRELPLRLAEFGSCHRNEPSGA 385 Query: 147 F-GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP-- 201 G+MR R F DA+ F + ++NKM + + F G I ++ + P Sbjct: 386 LHGLMRVRGFTQDDAHIFCTEDQILDEVINFNKMLMETYKDF---GFNDIEVKLSTRPEK 442 Query: 202 -IGGD 205 +G D Sbjct: 443 RVGSD 447 >gi|149195433|ref|ZP_01872516.1| threonyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] gi|149134438|gb|EDM22931.1| threonyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] Length = 613 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 12/178 (6%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---- 93 G+ WLP G N+ ++ + + P + +++W SG Y +Y + M Sbjct: 233 GMPIWLPRGAMLRANLEKLLFSAHIQREYEPVRGPEILRSEMWKISGHYYNYKENMYFTE 292 Query: 94 LRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 + D +A YG P + IF ++SY+ LP F++ R E G++ Sbjct: 293 IAHDDNQKQAEEYGIKPMNCLSHVKIFGHKVRSYKELPLRFFEFGTVHRHEKSGVLHGLL 352 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGD 205 R REF DA+ F PE + K+ I R G K I R E IG D Sbjct: 353 RVREFTQDDAHIF-CRPEQIEEEVIKVLDFVDSIMQRFGFKYEMEISTRPEKS-IGSD 408 >gi|322796311|gb|EFZ18882.1| hypothetical protein SINV_16250 [Solenopsis invicta] Length = 807 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G + P G + + IR E + G E+ P + ++ LW SG + Y + Sbjct: 422 HELSPGSCFFQPRGAYIYNTLMEFIRSEYRKRGFQEVITPNIYNSKLWQTSGHWQHYAEN 481 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D + P + IF +S+R LP + R+EL G+ R Sbjct: 482 MFSF-DVEKETFALKPMNCPGHCLIFDVRCRSWRELPLRLADFGVLHRNELSGALTGLTR 540 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 541 VRRFQQDDAHIF 552 >gi|291550699|emb|CBL26961.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus torques L2-14] Length = 650 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 3/128 (2%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G + + I +E+ + G I P + +DL+ SG +D Y + M L Sbjct: 259 QGLPLIMPNGVIIMQELQRWIEDEEAKRGYIRTKTPLMAKSDLYKISGHWDHYKEGMFVL 318 Query: 97 ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D ++ P ++++ SYR+LP + + FR+E G+ R R Sbjct: 319 GDEEKDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYGETSTLFRNEDSGEMHGLTRVR 378 Query: 154 EFLMKDAY 161 +F + + + Sbjct: 379 QFTISEGH 386 >gi|302894055|ref|XP_003045908.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256726835|gb|EEU40195.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 555 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 7/173 (4%) Query: 23 HKLMLRTGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADL 79 +++L+ M+ +++ G + PL + + + G E + P L S L Sbjct: 63 QEVVLKAEMVEYYTEISGFFVLRPLAMHIWNEIRKWFQAHIEEMGVDETNFPMFLSSKSL 122 Query: 80 WVESGRYDSYGKEMLRLADRNDK----AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 E + + E+ + DK + PT E VM + I+S+R+LP Q Sbjct: 123 EKEKDHVEGFAPELAWVTKAGDKDLEVPVAVRPTSEAVMYPYYSKWIRSHRDLPLRLNQW 182 Query: 136 QLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 R E + +R+REFL ++ ++ LT E + ++ Y ++ +L Sbjct: 183 NSVVRWEAKQTTPFLRTREFLWQEGHTAHLTEELAGVEVLEILELYAGVYEKL 235 >gi|78186013|ref|YP_374056.1| threonyl-tRNA synthetase, class IIA [Chlorobium luteolum DSM 273] gi|78165915|gb|ABB23013.1| Ser-tRNA(Thr) hydrolase [Chlorobium luteolum DSM 273] Length = 677 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 7/165 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + +++EQ R G + + P + + +L+ SG Y Y L Sbjct: 293 GLPVWLPKGAIIRQELETFLKDEQRRRGYLPVYTPHIGNIELYKRSGHYPYYSDSQFPPL 352 Query: 95 RLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D + K Y P + I+ S ++SYR+LP + +R E G++R Sbjct: 353 TYHDEDGKQEQYLLKPMNCPHHHLIYSSEMRSYRDLPIRLTEFGTVYRHEQSGELNGLVR 412 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 +R F D++ + + N + ++ +F LG ++ R Sbjct: 413 ARGFTQDDSHIYCRPDQLVDEICNAIDLTQF-VFRTLGFDAVETR 456 >gi|118591255|ref|ZP_01548654.1| threonyl-tRNA synthetase [Stappia aggregata IAM 12614] gi|118436331|gb|EAV42973.1| threonyl-tRNA synthetase [Stappia aggregata IAM 12614] Length = 656 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 20/226 (8%) Query: 5 KYFLPILQENPRDAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H KL + H + G+ W P G ++ A R Sbjct: 237 KAYLHMLEE----AEKRDHRKLGREMDLFHFQEEGPGVVFWHPKGWDMFQSLIAYKRRVL 292 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEM--LRLAD---RNDKAMIYGPTHEEVMTD 116 T E++ P + LW SG + Y + M ++ AD +++ P + Sbjct: 293 KDTYK-EVNAPQVLHTSLWETSGHWTWYKENMFSVQCADPEAEDERVFALKPMNCPGHVQ 351 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IF+ +KSYR+LP + + R E G+MR R F DA+ F T E Sbjct: 352 IFKHGLKSYRDLPMRLAEFGMVHRYEPSGALHGLMRVRGFTQDDAHVF-CTEEQMADECL 410 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS--HEFIVLADT 216 K+ L ++ G I ++ + P +G D + H +++D Sbjct: 411 KINDLILSVYEDFGFDEIVVKLSTRPEKRVGTDAAWDHAEAIMSDV 456 >gi|295109520|emb|CBL23473.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus obeum A2-162] Length = 653 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 3/128 (2%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G + + I +E+ + G + P + +DL+ SG +D Y M L Sbjct: 259 QGLPLIMPNGVIMMQELQRWIEDEETKRGYVRTKTPLMAKSDLYKISGHWDHYKDGMFVL 318 Query: 97 ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D + ++ P ++++ SYR+LP + + FR+E G+ R R Sbjct: 319 GDEENDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYGETSTLFRNEDSGEMHGLTRVR 378 Query: 154 EFLMKDAY 161 +F + + + Sbjct: 379 QFTISEGH 386 >gi|322374872|ref|ZP_08049386.1| serine--tRNA ligase [Streptococcus sp. C300] gi|321280372|gb|EFX57411.1| serine--tRNA ligase [Streptococcus sp. C300] Length = 424 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|196001647|ref|XP_002110691.1| hypothetical protein TRIADDRAFT_54976 [Trichoplax adhaerens] gi|190586642|gb|EDV26695.1| hypothetical protein TRIADDRAFT_54976 [Trichoplax adhaerens] Length = 1241 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 68/320 (21%), Positives = 116/320 (36%), Gaps = 74/320 (23%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + IKS+R+LP Q R E + +R+REFL ++ +S ++ Sbjct: 947 PTSETVMYPSYAKWIKSHRDLPLKLNQWNNVVRWEFKHPQPFIRTREFLWQEGHSAFVSK 1006 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + ++ + Y RI+ L +IP +V E + F DF Sbjct: 1007 KEAEEEVFTILELYRRIYEE--LLAIP----------------VVKGRKTEKEKFAGGDF 1048 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 T + I N RG + Sbjct: 1049 T--------TTVEAFIDAN--------------------------------GRGAQGATS 1068 Query: 288 FYFGTKYSLPMSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 + G +S ++ + K+ +V S+GI + R + + D KG+I P VA Sbjct: 1069 HHLGQNFSKMFEIVYEHPETKEKAFVYQNSWGI-STRTLGVLCLVHGDNKGLIIPPKVAD 1127 Query: 347 FKISLINIKAHDQVCRDACEKIYARLS-----------KVGCDVFWDDMGEQIGSQFAVA 395 ++ +I + D KIY S + CD D+ G +F Sbjct: 1128 IQVIIIPCGISANLSEDERNKIYDSCSSYVKILKDGGIRADCDTR-DNYS--AGWKFNHY 1184 Query: 396 DLLGFPLQVIVGSKFVSDSK 415 +L G PL++ +G K + +++ Sbjct: 1185 ELKGVPLRMELGPKDIKNNQ 1204 >gi|149409915|ref|XP_001508543.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 719 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y + Sbjct: 332 HELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIYNSKLWLTSGHWQHYSEN 391 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + +F +S+R LP + R+EL G+ R Sbjct: 392 MFSF-EVEKEIFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTR 450 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 451 VRRFQQDDAHIF 462 >gi|86158405|ref|YP_465190.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|123736663|sp|Q2IJC0|SYT_ANADE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|85774916|gb|ABC81753.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 650 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 18/145 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+++ G WLP G + + +R + G E+ P L + LW SG + Y + Sbjct: 262 HEYAPGAPFWLPAGTVLYNVLEDAMRRLVLKNGYQEVKTPLLFNKRLWETSGHWGKYREN 321 Query: 93 MLRLAD-RNDKAM------------IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 M + D +D A+ + P+H I+R +SYR LP ++ Sbjct: 322 MFLVVDSESDPALALEDRCSFSLKPMNCPSHHL----IYRMDKRSYRELPVRYFTTDALH 377 Query: 140 RDELRPRF-GVMRSREFLMKDAYSF 163 R+E G+ R R+F DA+ + Sbjct: 378 RNEASGSLGGLTRVRQFEQDDAHIY 402 >gi|325688711|gb|EGD30720.1| serine--tRNA ligase [Streptococcus sanguinis SK115] Length = 425 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDSKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|319935875|ref|ZP_08010301.1| threonyl-tRNA synthetase [Coprobacillus sp. 29_1] gi|319809142|gb|EFW05623.1| threonyl-tRNA synthetase [Coprobacillus sp. 29_1] Length = 581 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 8/178 (4%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ +++ G+ +LP G + + +E + G + P + S +LW SG + +Y Sbjct: 198 MMSEYAPGMPFFLPHGMLLRNELEKFWYDEHTKEGYEFIKTPIMMSKELWEVSGHWYNYK 257 Query: 91 KEML-RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M L D + A+ P + ++++ + SY++LP ++ R E G Sbjct: 258 ENMYTSLVDEREFAI--KPMNCPGSLLVYKNGLHSYKDLPIRMGELGQVHRHEASGALNG 315 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIG 203 + R R F DA+ F +TP+ + ++ R++ LGL + R E IG Sbjct: 316 LFRVRTFTQDDAHIF-MTPDQIESEVVRLIAFIDRVYSMLGLSYDIELSTRPEEKYIG 372 >gi|164659836|ref|XP_001731042.1| hypothetical protein MGL_2041 [Malassezia globosa CBS 7966] gi|159104940|gb|EDP43828.1| hypothetical protein MGL_2041 [Malassezia globosa CBS 7966] Length = 815 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 7/141 (4%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +P G + L V +IR+ + G E+ P L + LW +SG ++ Y ++ Sbjct: 337 HDSSPGSPFVMPHGMRLLRKVERVIRDLYDTFGYDEVQTPQLFRSSLWKQSGHWEKYRED 396 Query: 93 M-----LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 M +D P + +F +SYR LP + R+E Sbjct: 397 MFSAQGFSCCGAHDDVFGLKPMNCPGHCVMFAHQPRSYRELPMRLAEFSPLHRNEASGAL 456 Query: 148 -GVMRSREFLMKDAYSFDLTP 167 G+ R R F DA+ F TP Sbjct: 457 SGLTRVRRFHQDDAHVF-CTP 476 >gi|322696936|gb|EFY88721.1| putative threonine--tRNA ligase [Metarhizium acridum CQMa 102] Length = 491 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 28/187 (14%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 RR P +E P +I + + T +S G +LP G + + + IR++ Sbjct: 27 RRQYSQKPEKREPPDHRKIGLQQELFITSA---YSPGSPIFLPNGARIFNRLIDFIRKQY 83 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR-----NDKAMIYGPTHEEVMTD 116 R G E+ PT+ LW +SG ++Y +M + D G H V D Sbjct: 84 ARYGFQEVITPTIYKKALWAKSGHLENYADDMYTVTGNASTPGKDTGGCCGSDHGPVEPD 143 Query: 117 -------------------IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 IF S ++SYR LP + R+E+ G+ R R F Sbjct: 144 SEADNEYGLKPMNCPGHCLIFASKVRSYRELPVRYADFSPLHRNEVSGALSGLTRVRRFH 203 Query: 157 MKDAYSF 163 D + F Sbjct: 204 QDDGHIF 210 >gi|322700868|gb|EFY92620.1| prolyl-tRNA synthetase [Metarhizium acridum CQMa 102] Length = 556 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 7/173 (4%) Query: 23 HKLMLRTGMI--HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADL 79 +++L+ M+ +Q G + PL + G E S P L L Sbjct: 62 QEVVLKAEMVEYYQEISGFFVLRPLSMHIWSTIRKWFSGHIEELGVEEASFPLFLSKTSL 121 Query: 80 WVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 E D + E+ + DK + PT E VM + I+S+R+LP Q Sbjct: 122 DKEKDHVDGFAPELAWVERAGDKKLDVPVAIRPTSEAVMYPYYAKWIRSHRDLPLRLNQW 181 Query: 136 QLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 R E + +R+REFL ++ ++ LT E + ++ Y ++ +L Sbjct: 182 NSVVRWEAKQTTPFLRTREFLWQEGHTAHLTEELAGEEVLEILELYAGVYEKL 234 >gi|303388510|ref|XP_003072489.1| prolyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506] gi|303301629|gb|ADM11129.1| prolyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506] Length = 508 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 11/177 (6%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG Y P GQ + E+ G E P L + L E +++ E+ Sbjct: 44 KGCYVMRPQGQFVWKCIQKWFTEKIEELGVQECYFPMLVPKSTLEKEKNHVENFSPEVAW 103 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + ++ + PT E ++ F I+S+R+LP Q R EL +R Sbjct: 104 ITKCGNEVLGDPVAVRPTSETIIYPSFSKWIRSHRDLPLKINQWCSVLRWELHGTLPFIR 163 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM----RAESGPIGG 204 +EFL ++ ++ LT E S + Y RI+ L ++P+ ++ES GG Sbjct: 164 GKEFLWQEGHTAFLTKEESDVEVFAILDLYSRIYSE--LLAVPVIKGRKSESEKFGG 218 >gi|15237183|ref|NP_200065.1| OVA6 (OVULE ABORTION 6); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / proline-tRNA ligase [Arabidopsis thaliana] gi|10177035|dbj|BAB10183.1| prolyl tRNA synthetase [Arabidopsis thaliana] gi|34365755|gb|AAQ65189.1| At5g52520 [Arabidopsis thaliana] gi|51970984|dbj|BAD44184.1| prolyl tRNA synthetase [Arabidopsis thaliana] gi|332008841|gb|AED96224.1| prolyl-tRNA synthetase [Arabidopsis thaliana] Length = 543 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 9/108 (8%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GKE+ ++ ++ PT E ++ +F I SYR+LP Q R E+R + Sbjct: 158 GKEL-------EEKLVVRPTSETIVNHMFTQWIHSYRDLPLMINQWANVTRWEMRTK-PF 209 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI-FHRLGLKSIPMR 196 +R+ EFL ++ ++ TPE ++ +M Y R F + + IP R Sbjct: 210 IRTLEFLWQEGHTAHATPEEAEKEAKQMIEIYTRFAFEQTAIPVIPGR 257 >gi|330466285|ref|YP_004404028.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032] gi|328809256|gb|AEB43428.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032] Length = 468 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 9/97 (9%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 ++ PT E V+ + I SYR+LP Q R ELRPR +R+ EFL ++ ++ Sbjct: 104 VVVRPTSETVIGEFMAKWIDSYRDLPLLLNQWANVVRWELRPRI-FLRTSEFLWQEGHTA 162 Query: 164 DLTPEGSK--------HSYNKMFVSYLRIFHRLGLKS 192 T E ++ +Y + V+ L I +GLK+ Sbjct: 163 HATREDARAYARKILHEAYEDLMVNVLGIPVVVGLKT 199 >gi|315222160|ref|ZP_07864069.1| seryl-tRNA synthetase [Streptococcus anginosus F0211] gi|315188786|gb|EFU22492.1| seryl-tRNA synthetase [Streptococcus anginosus F0211] Length = 425 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHQKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---YVLIPTAEVPLTNYYRGEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEHSYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|325695149|gb|EGD37050.1| serine--tRNA ligase [Streptococcus sanguinis SK150] Length = 425 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|302865324|ref|YP_003833961.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|302568183|gb|ADL44385.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] Length = 404 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 12/133 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G A V +RE + R G + P L +L+ SG + +M + Sbjct: 23 GLPIWLPAGAAARHAVEEYVRELERRAGYQHVYSPPLGKRELFELSGHLGYFADDMFPPM 82 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM---- 150 RL+ D + P +FR+ +SYR LP ++ +R E R GV+ Sbjct: 83 RLS--ADDEFVLRPALCPHHALVFRARGRSYRELPLRVAELGGMYRAE---RSGVLGGLS 137 Query: 151 RSREFLMKDAYSF 163 R R + DA++F Sbjct: 138 RVRAISLNDAHNF 150 >gi|196012975|ref|XP_002116349.1| hypothetical protein TRIADDRAFT_50865 [Trichoplax adhaerens] gi|190580940|gb|EDV21019.1| hypothetical protein TRIADDRAFT_50865 [Trichoplax adhaerens] Length = 680 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 83/408 (20%), Positives = 166/408 (40%), Gaps = 49/408 (12%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G +LP G + ++R++ + G E+ P + S+ LW+ SG + Y +M Sbjct: 298 SPGSCFFLPRGAHIYGILMQLMRDQYRKRGFHEVLSPNIYSSKLWMTSGHWQHYKDDMFT 357 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 D+ + P + +F +S+R LP + + + R+EL G+ R R Sbjct: 358 FDVEKDQFGL-KPMNCPGHCVMFSHRPRSWRELPLRYAEFGVLHRNELSGTLSGLTRVRR 416 Query: 155 FLMKDAYSF---DLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHEF 210 F DA+ F D + K + F+ Y I+ LG + + + G+ Sbjct: 417 FQQDDAHIFCRDDQVKDEIKGCLD--FLKY--IYDTLGFQLKLFLSTRPDEFMGE----- 467 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 I D E Q+ D+ + E+ A Y D+ ++ D+ Sbjct: 468 IATWDRAEQQL--------------RESLDEFGLKWGLKEKDGAFYGPKIDI---QVLDA 510 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGIGAMRVVAAV 328 L + + ++ F T+++L T+ G +G D V + +G++ + AV Sbjct: 511 LRRPHQCATIQLD----FQLPTRFNL----TYVGKNGDDTLRPVIIHRAILGSVERMIAV 562 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 + + GK WP ++P + +I + A D+ +++++ V D+ G+ Sbjct: 563 LCENFAGK---WPFWLSPRQAMVIPVAAKFDEYALQVRDQLHSAGFYVDVDL---APGDT 616 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + + A L + ++VG K + V ++ R + + ++ +VI Sbjct: 617 MNKKVRNAQLAQYNFSMVVGQKECENKSVNVRSRNNQVYGEQTIVKVI 664 >gi|121712626|ref|XP_001273924.1| glycyl-tRNA synthetase [Aspergillus clavatus NRRL 1] gi|119402077|gb|EAW12498.1| glycyl-tRNA synthetase [Aspergillus clavatus NRRL 1] Length = 699 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 10/128 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++ ++IE + + +G++ +P +AP K+ ++ + H R +++ Sbjct: 547 SFGIG--RILYSMIEHVYWSREGDEARGVLSFPPVIAPTKVLIVPLSTHASF-RPLLQQL 603 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L ++G DD IG ++A D LG P + V + V D+ ++ R T + Sbjct: 604 MTKLRRLGVSNRVDDSSASIGKRYARNDELGTPFGITVDFQSVKDNTFTLRDRDTTKQVR 663 Query: 429 MSLEEVIN 436 S EE++ Sbjct: 664 ASEEEILQ 671 Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171 +++PF I FR+E+ PR G++R REFLM + + + PEG K Sbjct: 281 QSMPFASASIGKSFRNEISPRAGLLRVREFLMAEIEHY-VDPEGGK 325 >gi|47226601|emb|CAG08617.1| unnamed protein product [Tetraodon nigroviridis] Length = 677 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G +LP G + + IR E R G E+ P + ++ LW SG + Y Sbjct: 325 FFHDLSPGSCFFLPKGAFIYNTLIEFIRSEYRRRGFQEVVSPNIYNSKLWQTSGHWQHYS 384 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 385 ENMFSF-ESEKETFALKPMNCPGHCLMFDHRPRSWRELPLRMADFGVLHRNELSGALTGL 443 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 444 TRVRRFQQDDAHIF 457 >gi|327462380|gb|EGF08705.1| serine--tRNA ligase [Streptococcus sanguinis SK1057] Length = 425 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|291165911|gb|EFE27958.1| threonine--tRNA ligase [Filifactor alocis ATCC 35896] Length = 655 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 5/159 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRT-GAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ LP G K + + I + ++R G + P + +DL+ SG +D Y + M Sbjct: 260 QGLPLLLPKGTKMVMKLQRWIEDLEDREWGYVRTKTPLMAKSDLYRISGHWDHYKEGMFV 319 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 L D ++ P ++++ KSYR+LP+ + FR+E G+ R Sbjct: 320 LGDEEVDKEVFALRPMTCPFQYYVYKNTQKSYRDLPYRMGETSTLFRNEDSGEMHGLTRV 379 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 R+F + + ++ + P+ ++ + + LGL+ Sbjct: 380 RQFTISEGHNV-VRPDQAEEELQNCLNLAVYVLTTLGLQ 417 Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 11/115 (9%) Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 H +G Y R +A +IE + GK W + P ++ ++ I D+ A E++ Sbjct: 519 HRTSLGCYE----RTLAWLIEK-YAGKFPTW---LCPEQVRILPI--SDKYAEYA-EEVK 567 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 L++ G DV D E+IG + A L P ++VG K SD V ++ R G Sbjct: 568 QELARNGVDVTVDHRSEKIGFKIRDARLNRLPYMLVVGEKEASDRTVSVRSRYAG 622 >gi|289208097|ref|YP_003460163.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] gi|288943728|gb|ADC71427.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] Length = 638 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 1/127 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + + + G + P + + +LW SG D Y + M Sbjct: 262 GLVFWHPKGARIRREIEKYWYDMHEKAGYDFVVSPHIANLELWKTSGHADFYAESMYEPM 321 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + +A P + +++ + SYR+LP + ++ +R E+ G+MR R F Sbjct: 322 EDEHQAFQLKPMNCPFHVLMYKDRLHSYRDLPLRWAEMGTVYRREMSGALHGLMRVRGFT 381 Query: 157 MKDAYSF 163 DA+ F Sbjct: 382 QDDAHIF 388 >gi|332366431|gb|EGJ44182.1| serine--tRNA ligase [Streptococcus sanguinis SK355] Length = 425 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|156098721|ref|XP_001615376.1| threonyl-tRNA synthetase [Plasmodium vivax SaI-1] gi|148804250|gb|EDL45649.1| threonyl-tRNA synthetase, putative [Plasmodium vivax] Length = 912 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G WLP G K + + +R E E+ P + S DLW SG Y +Y K+ + Sbjct: 456 SPGSCFWLPHGAKIYNKLIDFVRREYRIRLYDEVITPNVFSCDLWRTSGHYQNY-KDCMF 514 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + K P + +F+ SYR+LP + R+E+ G+ R R Sbjct: 515 IFNVEQKEWGMKPMNCPGHCVMFKQLNASYRSLPIRLADFGVLHRNEISGSLSGLTRVRR 574 Query: 155 FLMKDAYSF 163 F D++ F Sbjct: 575 FQQDDSHIF 583 >gi|212711437|ref|ZP_03319565.1| hypothetical protein PROVALCAL_02510 [Providencia alcalifaciens DSM 30120] gi|212685893|gb|EEB45421.1| hypothetical protein PROVALCAL_02510 [Providencia alcalifaciens DSM 30120] Length = 653 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 85/427 (19%), Positives = 157/427 (36%), Gaps = 54/427 (12%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + Y L + + RD +L L + + + G+ W G + +R + Sbjct: 241 AAYLLRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWTIFRELETFVRTKLKS 298 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW +G +++Y M + N + + P + IF +K Sbjct: 299 YNYQEVKGPFMMDRVLWERTGHWENYKDAMFTTSSENREYCV-KPMNCPGHVQIFNQGLK 357 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE--GSKHSYNKMFVS 180 SYR+LP + R+E G+MR R F DA+ F + G S +M Sbjct: 358 SYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILGEVTSCIEMIYD 417 Query: 181 YLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ G + I ++ + P IG D + A+ SK P E Sbjct: 418 ---VYSTFGFEKIVVKLSTRPEKRIGTD---DMWDTAEADLANALKSKGIEFEYQPGEGA 471 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + I L+D L R + G + + LP Sbjct: 472 FYGPKIEFT--------------------LYDCLD-------RAWQCGTV---QLDFFLP 501 Query: 298 --MSATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 ++A++ G + + V + +G++ ++ + G +P +AP ++ ++NI Sbjct: 502 GRLNASYVGENNERITPVMIHRAVLGSLERFIGILTEEYAG---FFPTWLAPQQVVVMNI 558 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D +++ ++L VG D E+IG + L P ++ G K V Sbjct: 559 TDSQA---DYVQELVSKLQSVGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGEKEVESG 615 Query: 415 KVEIKHR 421 KV ++ R Sbjct: 616 KVSVRTR 622 >gi|116075451|ref|ZP_01472711.1| threonyl-tRNA synthetase [Synechococcus sp. RS9916] gi|116067648|gb|EAU73402.1| threonyl-tRNA synthetase [Synechococcus sp. RS9916] Length = 609 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 81/393 (20%), Positives = 146/393 (37%), Gaps = 45/393 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ G + P + LW SG D Y + M Sbjct: 229 GLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYTPHVADISLWKTSGHLDFYSESMFGPM 288 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 289 VVDEREYQLKPMNCPFHVLTYASTLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 347 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIV 212 DA+ F L PE ++ RI K+ + + P IG D + Sbjct: 348 TQDDAHVFCL-PEQISDEILRILDLTERILSTFDFKNYEINLSTRPEKSIGDDAVWD--- 403 Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 LA G + K + D+ + F Y D+ K+ D++ Sbjct: 404 LATKGLIEALERKGW-DYKVDEGGGAF----------------YGPKIDL---KIEDAIG 443 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIES 331 + S ++ F ++ L + AD M I G++ ++ Sbjct: 444 RMWQCSTIQLD----FNLPERFKL----DYVAADSSKQRPIMIHRAIFGSLERFFGIMTE 495 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++ G W +AP +I L+ + D+V + E + +L G D GE++G Sbjct: 496 NYAGDFPFW---LAPEQIRLLPVT--DEV-QSYAESLCDQLKAAGVRASVDRSGERLGKL 549 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + P+ ++G+K + ++ R G Sbjct: 550 IRTGEKMKIPVLAVIGAKEAEQASASLRSRRDG 582 >gi|46121741|ref|XP_385425.1| hypothetical protein FG05249.1 [Gibberella zeae PH-1] Length = 553 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 7/173 (4%) Query: 23 HKLMLRTGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADL 79 +++L+ M+ +++ G + PL + + + G E + P L S L Sbjct: 62 QEVVLKAEMVEYYTEISGFFVLRPLSMHIWNEIRKWFQGHIEEMGVDETNFPMFLSSKSL 121 Query: 80 WVESGRYDSYGKEMLRLADRNDK----AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 E + + E+ + DK + PT E VM + I+S+R+LP Q Sbjct: 122 EKEKDHVEGFAPELAWVTKAGDKDLEVPVAVRPTSEAVMYPYYSKWIRSHRDLPLRLNQW 181 Query: 136 QLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 R E + +R+REFL ++ ++ LT E + ++ Y ++ +L Sbjct: 182 NSVVRWEAKQTTPFLRTREFLWQEGHTAHLTEELAGAEVLEILELYAGVYEKL 234 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 11/167 (6%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGAD--GKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 + RGI+ G +S T + G +V S+G+ + RV+ ++ D Sbjct: 266 NGRGIQGATSHALGQNFSKMFDITVEDPQKQGSHIHVWQNSWGL-STRVIGVMVMIHGDD 324 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVC-------RDACEKIYARLSKVGCDVFWD-DMGEQ 387 KG++ P VA ++ ++ + + + D E+I A L K G V D G Sbjct: 325 KGLVLPPRVAKTQVVIVPVGINKKTTPEEKKKHEDQVEEIRANLKKAGVRVTADWREGYT 384 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +F +L G PL+V G K + + R TG + ++++ +V Sbjct: 385 PAWKFNDWELKGVPLRVEFGPKDAAKGVISTARRDTGEKGEIAIADV 431 >gi|327467137|gb|EGF12647.1| serine--tRNA ligase [Streptococcus sanguinis SK330] Length = 425 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|302865885|ref|YP_003834522.1| prolyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|302568744|gb|ADL44946.1| prolyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] Length = 468 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 9/97 (9%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 ++ PT E V+ + I SYR+LP Q R ELRPR +R+ EFL ++ ++ Sbjct: 104 VVVRPTSETVIGEFMAKWIDSYRDLPLLLNQWANVVRWELRPRI-FLRTSEFLWQEGHTA 162 Query: 164 DLTPEGSK--------HSYNKMFVSYLRIFHRLGLKS 192 T E ++ +Y + V+ L I +GLK+ Sbjct: 163 HATREDARAYARRILHEAYEDLMVNVLGIPVVVGLKT 199 >gi|148675291|gb|EDL07238.1| threonyl-tRNA synthetase-like 2, isoform CRA_a [Mus musculus] Length = 365 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 2/139 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y Sbjct: 170 FFHDLSPGSCFFLPRGAFIYNALMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYS 229 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D P + +F +S+R +P F + R+EL G+ Sbjct: 230 NNMFTF-DVEKDTFALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLSGL 288 Query: 150 MRSREFLMKDAYSFDLTPE 168 R R F DA+ F + + Sbjct: 289 TRVRRFQQDDAHIFCMVEQ 307 >gi|78187351|ref|YP_375394.1| prolyl-tRNA synthetase [Chlorobium luteolum DSM 273] gi|114152226|sp|Q3B2T0|SYP_PELLD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78167253|gb|ABB24351.1| prolyl-tRNA synthetase [Chlorobium luteolum DSM 273] Length = 481 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/158 (22%), Positives = 72/158 (45%), Gaps = 3/158 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G G ++ F+ D + YV S+G+ + R++ A+I + D +G++ Sbjct: 220 KALQAGTSHNLGQNFAKAFDCQFQTKDSRLDYVWATSWGV-STRLIGALIMAHSDDRGLV 278 Query: 340 WPDSVAPFKISLINIKAHDQVC-RDACEKIYARLSKVGCDVFWDDMGEQI-GSQFAVADL 397 P +A ++ +I I D+ + + + A L G F D + G +FA +L Sbjct: 279 LPPKLASRQVVIIPILRGDKAAVLEQADAMAASLKAAGIPAFVDGSEQNSPGWKFAEYEL 338 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P+++ VG + + R T + ++ L E + Sbjct: 339 QGIPVRIEVGPRDIEKGICIAARRDTLEKSELQLGETL 376 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ ++ I+SYR+LP Q R E+R R +R+ EFL ++ ++ TP Sbjct: 108 PTSETIIWSSYKKWIQSYRDLPILINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHATP 166 Query: 168 EGSKHSYNKMFVSY 181 E S+ +M Y Sbjct: 167 EESQEEVMRMINVY 180 >gi|57641105|ref|YP_183583.1| threonyl-tRNA synthetase [Thermococcus kodakarensis KOD1] gi|73919819|sp|Q5JGC8|SYT_PYRKO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|57159429|dbj|BAD85359.1| Threonyl-tRNA synthetase [Thermococcus kodakarensis KOD1] Length = 626 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 71/324 (21%), Positives = 132/324 (40%), Gaps = 50/324 (15%) Query: 124 SYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYRNLP Y++ + FR E G+ R R F M D ++ + + + K + Sbjct: 312 SYRNLPLRMYELTRYSFRREKSGELSGLRRLRAFTMPDMHTVARDLKQAMDEFKKQYKLS 371 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 + + +GL + E + ++DF + +N DF Sbjct: 372 MEVLKGVGLTP----------------------EDYEVAIRFTRDFWE-----QNRDFIV 404 Query: 240 --DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 II ++E W + D+L + +S I+V + FG KY Sbjct: 405 ELAKIIGKPVLIEMWDQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERFGIKYY-- 462 Query: 298 MSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIE--SSHDGKGI--IWPDSVAPFKISL 351 +GK+ + + GA+ RV+ A++E + KGI ++P ++P ++ + Sbjct: 463 ------DEEGKERTPLILHCSPSGAIERVMYAILEKQAKLQEKGIKPMYPLWLSPIQVRV 516 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 I + D+V D + +L V DD G+++ + A+ P ++VG Sbjct: 517 IPV--SDEVM-DYALYVAGKLEGAKIRVDVDDTGDRLNKKIRKAEKEWIPYIIVVGRNEK 573 Query: 412 SDSKVEIKHRLTGIREDMSLEEVI 435 + V ++ R G + +M LE++I Sbjct: 574 EQNTVTVRRRSDGRQVEMQLEDLI 597 >gi|312214020|emb|CBX94022.1| similar to prolyl-tRNA synthetase [Leptosphaeria maculans] Length = 561 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 69/334 (20%), Positives = 124/334 (37%), Gaps = 71/334 (21%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E M F I+S+R+LP Q R E + +RSREFL ++ Sbjct: 146 EKPVAVRPTSETAMYPYFARKIQSHRDLPLKLNQWNNVVRWEFKHPMPFIRSREFLWQEG 205 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ LT E + ++ Y ++ L ++P+ + G T+ Sbjct: 206 HTAHLTEEEASAEVLQILDWYSDVYQ--NLLAVPV------VKG--------------TK 243 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDV---HNEKLFDSLPENKRV 277 K FP T + I Q AATS H K+F+ E+ Sbjct: 244 TVNEK----FPGADYTTTIEGFIPATGRGIQ-----AATSHCLGQHFSKMFNITVEDPTA 294 Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 G + H+ + T + L R + +I + D +G Sbjct: 295 KENG-KSEHVHVWQTSWGL------------------------TTRSIGVMILTHGDNRG 329 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI--------- 388 ++ P VA ++ LI + ++ + E +Y+++ + D+ ++G ++ Sbjct: 330 LVIPPRVAEIQVVLIPVGVTAKMSAEDKEALYSKVKNIADDLH--EVGVRVETDYREGYS 387 Query: 389 -GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 G +F +L G PL++ G K V R Sbjct: 388 PGWKFNDWELKGIPLRIEFGPKDAEKGVVTTSRR 421 Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust. Identities = 42/205 (20%), Positives = 80/205 (39%), Gaps = 43/205 (20%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH------YVQMGSYGIGAMRVVAAVIE 330 + RGI+ G +S + T + K++ +V S+G+ R + +I Sbjct: 264 ATGRGIQAATSHCLGQHFSKMFNITVEDPTAKENGKSEHVHVWQTSWGL-TTRSIGVMIL 322 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI-- 388 + D +G++ P VA ++ LI + ++ + E +Y+++ + D+ ++G ++ Sbjct: 323 THGDNRGLVIPPRVAEIQVVLIPVGVTAKMSAEDKEALYSKVKNIADDLH--EVGVRVET 380 Query: 389 --------GSQFAVADLLGFPLQVIVGSK------------------------FVSDSKV 416 G +F +L G PL++ G K V + K Sbjct: 381 DYREGYSPGWKFNDWELKGIPLRIEFGPKDAEKGVVTTSRRDIDDKDAARGTTSVDNIKT 440 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 EI L I+ DM Y HR Sbjct: 441 EIPKLLEQIQSDMFERADKKYREHR 465 >gi|315502429|ref|YP_004081316.1| prolyl-tRNA synthetase [Micromonospora sp. L5] gi|315409048|gb|ADU07165.1| prolyl-tRNA synthetase [Micromonospora sp. L5] Length = 468 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 9/97 (9%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 ++ PT E V+ + I SYR+LP Q R ELRPR +R+ EFL ++ ++ Sbjct: 104 VVVRPTSETVIGEFMAKWIDSYRDLPLLLNQWANVVRWELRPRI-FLRTSEFLWQEGHTA 162 Query: 164 DLTPEGSK--------HSYNKMFVSYLRIFHRLGLKS 192 T E ++ +Y + V+ L I +GLK+ Sbjct: 163 HATREDARAYARRILHEAYEDLMVNVLGIPVVVGLKT 199 >gi|15228692|ref|NP_191771.1| tRNA synthetase class II (G, H, P and S) family protein [Arabidopsis thaliana] gi|30695549|ref|NP_850736.1| tRNA synthetase class II (G, H, P and S) family protein [Arabidopsis thaliana] gi|6899922|emb|CAB71872.1| multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis thaliana] gi|16648885|gb|AAL24294.1| multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis thaliana] gi|22136084|gb|AAM91120.1| multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis thaliana] gi|332646791|gb|AEE80312.1| prolyl-tRNA synthetase [Arabidopsis thaliana] gi|332646792|gb|AEE80313.1| prolyl-tRNA synthetase [Arabidopsis thaliana] Length = 530 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/157 (21%), Positives = 72/157 (45%), Gaps = 7/157 (4%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RG++ G ++ F+ + V S+ + R + +I + D KG Sbjct: 265 TGRGVQGATSHCLGQNFAKMFEINFENEKAETEMVWQNSWAY-STRTIGVMIMTHGDDKG 323 Query: 338 IIWPDSVAPFKISLINIK---AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI--GSQF 392 ++ P VA ++ +I + A+ Q DAC + L + G +D+ + G ++ Sbjct: 324 LVLPPKVASVQVVVIPVPYKDANTQGIYDACTATASALCEAGIRAE-EDLRDNYSPGWKY 382 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 + ++ G PL++ +G + + + +V R G++ED+ Sbjct: 383 SDWEMKGVPLRIEIGPRDLENDQVRTVRRDNGVKEDI 419 >gi|262283251|ref|ZP_06061018.1| seryl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] gi|262261503|gb|EEY80202.1| seryl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] Length = 425 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|171687735|ref|XP_001908808.1| hypothetical protein [Podospora anserina S mat+] gi|170943829|emb|CAP69481.1| unnamed protein product [Podospora anserina S mat+] Length = 514 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 18/154 (11%) Query: 28 RTGMIHQH--SKGIYS-----WLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 RT +HQ + IYS +LP G + + + + +R + R G E+ P + DLW Sbjct: 81 RTLGLHQKLFTTSIYSPGSAFFLPSGTRIFNRLVSFLRNQYVRYGFEEVITPLIYKKDLW 140 Query: 81 VESGRYDSYGKEMLRL----------ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 +SG ++Y ++M + + D+ P + IF S +S+R+LP Sbjct: 141 AKSGHLENYAQDMYTVTGARHASPEETEETDREYGLKPMNCPGHCLIFSSQKRSFRDLPI 200 Query: 131 TFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 + R+E G+ R R F D + F Sbjct: 201 RYADFSPLHRNENTGSLTGLTRVRRFHQDDGHIF 234 >gi|289168522|ref|YP_003446791.1| seryl-tRNA synthetase [Streptococcus mitis B6] gi|288908089|emb|CBJ22929.1| seryl-tRNA synthetase [Streptococcus mitis B6] Length = 424 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDSN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|253744023|gb|EET00284.1| Threonyl-tRNA synthetase [Giardia intestinalis ATCC 50581] Length = 695 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 3/136 (2%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M H+++ G ++ G + + A IRE + E+ PT + DLW SG Y Sbjct: 292 MTHKYAPGAPMFMNNGTRIYRKLEAFIRELLHEFDYEEVMTPTFLNTDLWGISGHLQHYK 351 Query: 91 KEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 + M L + YG P + +++SH S + LP + + R+EL Sbjct: 352 ENMFLLERKEKTDPQYGLKPMNCPCHCLLYKSHHHSVQELPIRMAEFGVVHRNELSGALS 411 Query: 148 GVMRSREFLMKDAYSF 163 G+ R F DA+ F Sbjct: 412 GLTRVVRFEQDDAHIF 427 >gi|153950997|ref|YP_001397450.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] gi|166223330|sp|A7H1S0|SYT_CAMJD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|152938443|gb|ABS43184.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] Length = 602 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 81/414 (19%), Positives = 161/414 (38%), Gaps = 49/414 (11%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WL G + + ++ + G + P L AD W SG Y +Y KE + Sbjct: 228 GLPIWLGNGARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANY-KENMYFT 286 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 +++ P + +++S ++SYR+LP F++ + R E G+ R REF Sbjct: 287 QIDEQEYGIKPMNCVGHIKVYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFT 346 Query: 157 MKDAYSFDLTPEGSKHSYNKM-FV-SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA 214 DA+ F + + + + FV + +++F D S+E + Sbjct: 347 QDDAHIFCMPSQIKEQVLEILAFVDNLMKLF-------------------DFSYEMEI-- 385 Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T + + + + D+ I E A Y D+ K+ D+L Sbjct: 386 STKPEKAIGDDEIWEVATKALKEALDEQGLKYGIDEGGGAFYGPKIDI---KITDAL--- 439 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADG---KDHYVQMGSYGIGAMRVVAAVIES 331 R + G I ++LP + D K V + +G+ ++ Sbjct: 440 ----KRKWQCGTI---QVDFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILTE 492 Query: 332 SHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 G+ +P +AP + ++ I +AH ++ I L ++ D + E + Sbjct: 493 HCAGE---FPFFIAPTAVGIVPIGEAHIAYAKE----IQKELLELNIDSEVYEKNESLSK 545 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + +A+ P+ +++G V+ V ++ R ++++SL+E I + S Sbjct: 546 KIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|332364654|gb|EGJ42423.1| serine--tRNA ligase [Streptococcus sanguinis SK1059] Length = 425 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|307330032|ref|ZP_07609183.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] gi|306884293|gb|EFN15328.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] Length = 471 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 72/345 (20%), Positives = 132/345 (38%), Gaps = 71/345 (20%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GKE+ ++ ++ PT E ++ + F ++SYR+LP Q R EL Sbjct: 99 GKEL-------EEPVVVRPTSETIVNEYFSKWVQSYRDLPLLINQWANVVRWEL------ 145 Query: 150 MRSREFLMKDAYSFDLTPEG-SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 R R FL + L EG + H+ + + HR Sbjct: 146 -RPRLFLRTTEF---LWQEGHTAHASYEDARDFAARIHR--------------------- 180 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 +V+ FM+ D+++++ ++ + TA ++ L Sbjct: 181 -----------EVYAR--FME-----------DVLAMDVVLGRKTARERFAGALNTLTLE 216 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 + + K +++G G ++ ++ DG+ V S+G R+V A+ Sbjct: 217 GMMGDGK-----ALQLGTSHELGQNFARAFHTSYLSKDGEQELVWQTSWG-STTRMVGAL 270 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + D G+ P +A ++ ++ IK D V E I LS G V DD + Sbjct: 271 VMMHGDDNGLRIPPRLASIQVVVLAIKGDDAVLAKVRE-IGELLSAAGVRVHVDDRTDTP 329 Query: 389 GSQFAV-ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + AV +L G P++V VG + + + R+ G +E + E Sbjct: 330 FGRRAVDWELKGVPVRVEVGPRDLESGTAMVARRIPGGKEPVRAE 374 >gi|330833399|ref|YP_004402224.1| hypothetical protein SSUST3_1623 [Streptococcus suis ST3] gi|329307622|gb|AEB82038.1| hypothetical protein SSUST3_1623 [Streptococcus suis ST3] Length = 424 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 8/143 (5%) Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + + +G+Y + ++ LAD N + PT E +T+ +R+ I Sbjct: 189 GYQEIITPYMVNHNSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYYRNEILE 245 Query: 125 YRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++LP F + FR E R G++R +F + F TPE S KM + Sbjct: 246 EKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-ATPEQSYDELEKMTAN 304 Query: 181 YLRIFHRLGLKSIPMRAESGPIG 203 I +LGL + +G +G Sbjct: 305 AENILQKLGLPYRVLALCTGDMG 327 >gi|326926536|ref|XP_003209455.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like, partial [Meleagris gallopavo] Length = 635 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y Sbjct: 313 FFHDLSPGSCFFLPRGAFLYNTLTDFIREEYHKRNFTEVVSPNIFNSKLWETSGHWQHYS 372 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M D + P + +F +S+R +P + R+EL G+ Sbjct: 373 ENMFSF-DIEKETFALKPMNCPGHCLMFAHRPRSWREMPLRLADFGVLHRNELSGTLSGL 431 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 432 TRVRRFQQDDAHIF 445 >gi|307706061|ref|ZP_07642880.1| seryl-tRNA synthetase [Streptococcus mitis SK321] gi|307618461|gb|EFN97609.1| seryl-tRNA synthetase [Streptococcus mitis SK321] Length = 424 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDSN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|307596038|ref|YP_003902355.1| glycyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] gi|307551239|gb|ADN51304.1| glycyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] Length = 591 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 8/121 (6%) Query: 320 GAMRVVAAVIESSH---DGKGII-WPDSVAPFK-ISLINIKAHDQVCRDACEKIYARLSK 374 G R+V +E ++ +GK ++ P +AP K + L IK + V ++I+ LS Sbjct: 446 GVDRIVYVTLEHAYTEVNGKPLLRLPPDIAPIKAVVLPIIKKQEYVS--IGKRIFKELSL 503 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +DD G IGS++A D +G P + + K +D+ V I+ R T + +++ EV Sbjct: 504 AGIRAVYDDDG-TIGSRYAKYDSIGVPFAITIDDKTPADNTVTIRDRDTKAQVRVNISEV 562 Query: 435 I 435 I Sbjct: 563 I 563 >gi|125718717|ref|YP_001035850.1| seryl-tRNA synthetase [Streptococcus sanguinis SK36] gi|166223300|sp|A3CQ45|SYS_STRSV RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|125498634|gb|ABN45300.1| Seryl-tRNA synthetase, putative [Streptococcus sanguinis SK36] Length = 425 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|270293326|ref|ZP_06199535.1| serine--tRNA ligase [Streptococcus sp. M143] gi|270278175|gb|EFA24023.1| serine--tRNA ligase [Streptococcus sp. M143] Length = 424 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|15618715|ref|NP_225001.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae CWL029] gi|15836339|ref|NP_300863.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae J138] gi|16752234|ref|NP_445602.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|33242166|ref|NP_877107.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] gi|8928382|sp|Q9Z7A0|SYT_CHLPN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|4377117|gb|AAD18944.1| Threonyl tRNA Synthetase [Chlamydophila pneumoniae CWL029] gi|7189978|gb|AAF38837.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|8979180|dbj|BAA99014.1| threonyl tRNA synthetase [Chlamydophila pneumoniae J138] gi|33236677|gb|AAP98764.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] Length = 635 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 89/435 (20%), Positives = 163/435 (37%), Gaps = 52/435 (11%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD + KL L + + S G+ + P G D + ++ G E+ Sbjct: 230 IEEAKKRDHRVLGAKLDLFSQ--QESSPGMPFFHPRGMIVWDALIRYWKQLHTAAGYKEI 287 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 P L + LW SG +D+Y M L D D A+ P + +++ + SY+ Sbjct: 288 LTPQLMNRQLWEVSGHWDNYKANMYTLQIDDEDYAI--KPMNCPGCMLYYKTRLHSYKEF 345 Query: 129 PFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P ++ R E G+MR R F DA+ F LTPE + + ++ Sbjct: 346 PLRVAEVGHVHRQEASGALSGLMRVRAFHQDDAHVF-LTPEQVEEETLNILQLVSTLYGT 404 Query: 188 LGLK---SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 GL+ + R E IG D E + D ++ + T F I+ Sbjct: 405 FGLEYHLELSTRPEKDTIGDDSLWEL-------------ATDALNRALVQSGTPF--IVR 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI---FYFGTKYSLPMSAT 301 A Y D+H K R + G I + ++ L + T Sbjct: 450 PGE-----GAFYGPKIDIH----------VKDAIQRTWQCGTIQLDMFLPERFELEYT-T 493 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 +G K V + G++ ++ + G+ +W ++P ++ +I + Sbjct: 494 AQGT--KSVPVMLHRALFGSIERFLGILIENFKGRFPLW---LSPEQVRIITVADRHIPR 548 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+ + RL G V DD E + + A + + +G ++++ + ++ R Sbjct: 549 AKELEEAWKRL---GLVVTLDDSSESVSKKIRNAQNMQVNYMITLGDHEINENVLAVRTR 605 Query: 422 LTGIREDMSLEEVIN 436 + D+S+E +N Sbjct: 606 DNRVINDVSVERFLN 620 >gi|67903696|ref|XP_682104.1| hypothetical protein AN8835.2 [Aspergillus nidulans FGSC A4] gi|40740933|gb|EAA60123.1| hypothetical protein AN8835.2 [Aspergillus nidulans FGSC A4] Length = 1309 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 67/128 (52%), Gaps = 10/128 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++ +++E + + +G++ +P +AP K+ L+ + ++ R +++ Sbjct: 490 SFGIG--RILYSLMEHVYYYREGDEARGVLSFPPVIAPTKVLLVPLSSNPAF-RPMVQEL 546 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L ++G DD IG ++A D LG P V V + V D+ + ++ R + + Sbjct: 547 TTKLRRLGVSSRVDDSSASIGKRYARNDELGTPFGVTVDFQSVKDNTITLRDRDSTKQVR 606 Query: 429 MSLEEVIN 436 S EE++ Sbjct: 607 ASQEEILQ 614 Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171 +PF I FR+E+ PR G++R REFLM + F + PEG K Sbjct: 239 MPFASASIGKSFRNEISPRAGLLRVREFLMAEIEHF-VDPEGGK 281 >gi|115375454|ref|ZP_01462714.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|115367497|gb|EAU66472.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 616 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 76/194 (39%), Gaps = 26/194 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H + G W P G ++ +R TG +E+ P + + LW SG + Y + Sbjct: 235 FHPFAPGSAFWSPKGTTLYQTLSQWMRRLTAETGYVEIKTPLMFNKGLWEASGHWGKYKE 294 Query: 92 EMLRLADRNDKAMIYG------PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 M + D + P+H F+ H SYR+LP + + R+E Sbjct: 295 NMFLVLDNESGEHDFSLKPMNCPSHHLYFG--FKRH--SYRDLPLRLHTQDVLHRNEAAG 350 Query: 146 RF-GVMRSREFLMKDAYSFDLTPE-GSK---------HSYNKMFVSYLRIF-----HRLG 189 G+ R R+F DA+ + + G + H YN + + Y F RLG Sbjct: 351 SLGGLTRVRQFAQDDAHIYCTEDQIGDEVRRFVKLLDHVYNAVGLKYSAKFSTRPEQRLG 410 Query: 190 LKSIPMRAESGPIG 203 ++ RAES G Sbjct: 411 EDALWDRAESALEG 424 >gi|331269136|ref|YP_004395628.1| threonyl-tRNA synthetase [Clostridium botulinum BKT015925] gi|329125686|gb|AEB75631.1| threonyl-tRNA synthetase [Clostridium botulinum BKT015925] Length = 637 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 4/134 (2%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + G + P G + + RE + G E+ P + + LW +SG +D Y + Sbjct: 255 LKEEGPGFPFFYPKGMILRNTLENYWREMHEKAGYGEIRTPIILNEKLWHQSGHWDHYKE 314 Query: 92 EM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 M D D A+ P + +++S + SYR LP ++ L R E G+ Sbjct: 315 NMYFTKIDGEDYAI--KPMNCPGSILVYKSDLHSYRELPIRLGELGLVHRHEYSGALHGL 372 Query: 150 MRSREFLMKDAYSF 163 MR R F DA+ F Sbjct: 373 MRVRNFTQDDAHIF 386 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 10/140 (7%) Query: 301 TFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 ++ GADG+ H M I G++ ++ + G +P +AP ++ ++NI +Q Sbjct: 494 SYVGADGEKHRPVMAHRVIFGSIERFIGILTEHYAGA---FPTWLAPVQVKIMNI-TDNQ 549 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V + C++I L + G V D E+IG + A L P +++G K ++++ + ++ Sbjct: 550 V--EYCKEIEKTLKENGIRVELDLRNEKIGYKIREAQLQKIPYMLVLGDKEMNENTIAVR 607 Query: 420 HRLTGIREDMSLEEVINYAS 439 R G D+ +++++ + Sbjct: 608 SRKQG---DLGAMQLVDFVA 624 >gi|312091207|ref|XP_003146898.1| hypothetical protein LOAG_11329 [Loa loa] gi|307757937|gb|EFO17171.1| hypothetical protein LOAG_11329 [Loa loa] Length = 574 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 63/319 (19%), Positives = 121/319 (37%), Gaps = 70/319 (21%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E V+ + I+SYR+LP Q R E + +R+REFL ++ ++ T Sbjct: 182 PTSETVIYPSYAKWIQSYRDLPLRLNQWCNVVRWEFKHPTPFLRTREFLWQEGHTAFQTK 241 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + +++ + Y +++ L +IP + E + F DF Sbjct: 242 QEAENEVFIILDLYAKVY--TDLLAIP----------------VTKGRKSEKEKFAGGDF 283 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + VE + V+ RGI+ Sbjct: 284 ------------------TTTVEAYVP----------------------VNGRGIQGATS 303 Query: 288 FYFGTKYSLPMSATFKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 + G +S +F+ + G + S+G+ R + A+I D G++ P VAP Sbjct: 304 HHLGQNFSKMFDISFEDPESGAKTFAWQNSWGM-TTRTIGAMIMIHSDNDGLVLPPRVAP 362 Query: 347 FKISLINIKAHDQVCRDACEKIYARL---------SKVGCDVFWDDMGEQIGSQFAVADL 397 ++ +I + Q+ + ++I+ + S++ D D G +F +L Sbjct: 363 IQVIIIPVGITSQMDKQIKQEIFIKAEEIMRILENSRIRVDTDLRD-NYSPGWKFNHWEL 421 Query: 398 LGFPLQVIVGSKFVSDSKV 416 G P+++ +G K + S+V Sbjct: 422 KGVPIRLELGPKDIKKSQV 440 >gi|307704266|ref|ZP_07641185.1| seryl-tRNA synthetase [Streptococcus mitis SK597] gi|307622177|gb|EFO01195.1| seryl-tRNA synthetase [Streptococcus mitis SK597] Length = 424 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDSN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|307710546|ref|ZP_07646982.1| seryl-tRNA synthetase [Streptococcus mitis SK564] gi|307618699|gb|EFN97839.1| seryl-tRNA synthetase [Streptococcus mitis SK564] Length = 424 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDSN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|307708238|ref|ZP_07644705.1| seryl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307615684|gb|EFN94890.1| seryl-tRNA synthetase [Streptococcus mitis NCTC 12261] Length = 424 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDSN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|189183871|ref|YP_001937656.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] gi|238692247|sp|B3CSS5|SYT_ORITI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189180642|dbj|BAG40422.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] Length = 648 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 15/143 (10%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 ++G+ W G + I + R G IE++ P + + LW +SG ++ + + M Sbjct: 260 AQGMPFWHSKGWTIFKIIKDYISCQIQRAGYIEVNTPMVLNQKLWEKSGHWEKFRENMFT 319 Query: 96 L------ADRN--------DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 L D N A+ P + IF IKSYR+LP + R Sbjct: 320 LDTNAAEQDHNLIKDSIETKCALALKPMNCPGHIQIFNYTIKSYRDLPLRMAEFGSCHRY 379 Query: 142 ELR-PRFGVMRSREFLMKDAYSF 163 E +G+MR R F+ DA+ F Sbjct: 380 EPSGALYGLMRVRSFVQDDAHIF 402 >gi|308811795|ref|XP_003083205.1| putative prolyl-tRNA synthetase [Oryza sativa (ISS) [Ostreococcus tauri] gi|116055084|emb|CAL57480.1| putative prolyl-tRNA synthetase [Oryza sativa (ISS) [Ostreococcus tauri] Length = 553 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 5/146 (3%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G G ++ TF G+ YV S+G+ + R+V +I + D G+ Sbjct: 291 KALQAGTSHNLGDNFAKAFDTTFLNDQGETKYVHQSSWGV-STRLVGGIIMTHGDDAGLT 349 Query: 340 WPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVA 395 P +AP ++ ++ I A + + I + L G D D + G +F Sbjct: 350 LPPKLAPIQVVVVPIWKKDAEKDEVMASVDGIISTLEGAGVRTHLDADQSKSPGWKFNQY 409 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ G P+++ VG K V+ I R Sbjct: 410 EMKGVPIRIEVGPKDVAKGACVIARR 435 >gi|39725443|emb|CAE45679.1| Threonyl-tRNA synthetase [Streptomyces parvulus] Length = 675 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 2/160 (1%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G D + R+ + + G + P + DL+ SG Y +++ Sbjct: 283 RGLPLWLPNGAIIRDELEDWARKTERKLGYKRVVTPHITQEDLYYLSGHLPYYAEDLYAP 342 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 D + + P + ++++ SYR+LP+ + +R E + G+MR+R F Sbjct: 343 IDIDGEKYYLKPMNCPHHHMVYKARPHSYRDLPYKVAEYGTVYRFERSGQLHGMMRTRGF 402 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 DA+ + T + +K + ++ + + LG+ M Sbjct: 403 SQNDAHIY-CTADQAKDQFLEVMRMHADYYRTLGISDFYM 441 >gi|293400866|ref|ZP_06645011.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305892|gb|EFE47136.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 577 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 90/426 (21%), Positives = 161/426 (37%), Gaps = 53/426 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ +++ G+ +LP G + + EE + + P + S +LW SG + +Y Sbjct: 194 MMSEYAPGMPFFLPNGMIIRNLLENFWYEEHTKENYKFIKTPIMMSKELWEVSGHWANY- 252 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +D+ P + +F++ + SY++LP ++ R E G+ Sbjct: 253 KENMYTTMVDDREFAIKPMNCPGSLLVFKNGLHSYKDLPLRMGELGQVHRHEASGALNGL 312 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 R R F DA+ F + P+ + ++ R++ GL + R E I GDL Sbjct: 313 FRVRTFTQDDAHIF-MRPDQIESEVKELINFIDRVYSIFGLSYRIELSTRPEKKYI-GDL 370 Query: 207 S---HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 + LAD C D+ + + F Y D H Sbjct: 371 AIWEKSEKALADA------CVSAGKDYKVNPGDGAF----------------YGPKLDFH 408 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + DSL R + G I +LP T+ DG K V + G Sbjct: 409 ---IKDSL-------GREWQCGTI---QLDMNLPERFDLTYVEKDGTKVRPVMLHRVIFG 455 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ + G +P +AP ++ ++ + H + A I +L +G Sbjct: 456 SIERFIGILIEHYAGH---FPTWLAPTQVMVVPV--HYERHAQAANAINEKLLAMGFRSK 510 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 D E++G + A L P Q+++G V + V ++ + M +EE I S Sbjct: 511 SDARNEKLGYRIREAQLAKIPYQLVIGDGEVEANTVTVRRAQSKESVTMPVEEFIAKLSA 570 Query: 441 RFSNNR 446 R Sbjct: 571 EVKEKR 576 >gi|196230454|ref|ZP_03129316.1| prolyl-tRNA synthetase [Chthoniobacter flavus Ellin428] gi|196225384|gb|EDY19892.1| prolyl-tRNA synthetase [Chthoniobacter flavus Ellin428] Length = 508 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 15/159 (9%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + I+ G + G ++ F+ +GK+ Y S+G+ + R++ V+ + D G+I Sbjct: 237 KAIQAGTSHFLGQNFAKASEIKFQSREGKEEYAWTTSWGV-STRLIGTVLMAHSDDDGLI 295 Query: 340 WPDSVAPFKISLINIKAHDQVCRD----ACEKIYARL-------SKVGCDVFWDDMGEQI 388 P +AP +I ++ I + RD A +K+ A L K+ +V D+G Sbjct: 296 LPPRIAPAQIVILPIAPKPET-RDAVFAAADKLAAELRAQTAFGEKISVEVDKRDIGGGT 354 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 S + G P+++ +G + + V + R G +E Sbjct: 355 KSWEWIKK--GVPIRIELGPRDLEKGTVAVARRDRGPKE 391 >gi|324992052|gb|EGC23974.1| serine--tRNA ligase [Streptococcus sanguinis SK405] gi|325697635|gb|EGD39520.1| serine--tRNA ligase [Streptococcus sanguinis SK160] gi|327459354|gb|EGF05700.1| serine--tRNA ligase [Streptococcus sanguinis SK1] gi|327490570|gb|EGF22351.1| serine--tRNA ligase [Streptococcus sanguinis SK1058] Length = 425 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|323350377|ref|ZP_08086041.1| serine--tRNA ligase [Streptococcus sanguinis VMC66] gi|322123450|gb|EFX95126.1| serine--tRNA ligase [Streptococcus sanguinis VMC66] Length = 425 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|72080721|ref|YP_287779.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] gi|114152215|sp|Q4A7Y3|SYP_MYCH7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71913845|gb|AAZ53756.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] Length = 479 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/143 (18%), Positives = 66/143 (46%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R ++ + G ++ +K + K S+G+ + R++ A++ D G+I Sbjct: 222 RALQSATAHFLGQNFAKNFEIFYKNKENKSQIPFQTSWGL-STRLIGAIVMVHSDDNGLI 280 Query: 340 WPDSVAPFKISLIN-IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +P +AP ++ ++ +Q + ++I L DD +QIG + +++ Sbjct: 281 FPPKIAPIQVDILEFFSKKNQEVKIFAKRIAKILKNAKIAYKIDDTDQQIGYKINNSEVH 340 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P+++ +G V ++++ + R Sbjct: 341 GAPIRIEIGPNEVKNNQICLVRR 363 >gi|328944998|gb|EGG39155.1| serine--tRNA ligase [Streptococcus sanguinis SK1087] Length = 425 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|310821380|ref|YP_003953738.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|309394452|gb|ADO71911.1| Threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 642 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 75/191 (39%), Gaps = 26/191 (13%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H + G W P G ++ +R TG +E+ P + + LW SG + Y + Sbjct: 261 FHPFAPGSAFWSPKGTTLYQTLSQWMRRLTAETGYVEIKTPLMFNKGLWEASGHWGKYKE 320 Query: 92 EMLRLADRNDKAMIYG------PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 M + D + P+H F+ H SYR+LP + + R+E Sbjct: 321 NMFLVLDNESGEHDFSLKPMNCPSHHLYFG--FKRH--SYRDLPLRLHTQDVLHRNEAAG 376 Query: 146 RF-GVMRSREFLMKDAYSFDLTPE-GSK---------HSYNKMFVSYLRIF-----HRLG 189 G+ R R+F DA+ + + G + H YN + + Y F RLG Sbjct: 377 SLGGLTRVRQFAQDDAHIYCTEDQIGDEVRRFVKLLDHVYNAVGLKYSAKFSTRPEQRLG 436 Query: 190 LKSIPMRAESG 200 ++ RAES Sbjct: 437 EDALWDRAESA 447 >gi|221134666|ref|ZP_03560969.1| threonyl-tRNA synthetase [Glaciecola sp. HTCC2999] Length = 637 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 93/452 (20%), Positives = 163/452 (36%), Gaps = 72/452 (15%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIR 58 ++ K +L L+E AE H+ + +T + H + + G+ W G + + IR Sbjct: 227 KQLKAYLNRLEE----AEKRDHRKIGKTLDLFHWQEEAPGMVFWHNDGWSIYTELESFIR 282 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 ++ + E+ P + LW +SG + Y M + I P + IF Sbjct: 283 KKLTQYDYQEVKGPLMMDRSLWEKSGHWGKYSSNMFTTESEKREYAI-KPMNCPGHVQIF 341 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R+E G+MR R F DA+ F T E + Sbjct: 342 NQGLKSYRDLPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIF-CTEEQILDEVSGC 400 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + G + I ++ + P E Sbjct: 401 IKMVYDTYETFGFEKIVVKLSTR--------------------------------PEERV 428 Query: 238 DFDDIISLNSIVEQWTAPYAATSDV--HNEKLFDSLPENKRVSARGIE------VGHIFY 289 DDI W +A +D N+ FD P IE + + Sbjct: 429 GSDDI---------WDKTESALADALKANDIEFDYQPGEGAFYGPKIEFTLHDCLDRAWQ 479 Query: 290 FGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDS 343 GT +S+P + +T+ DG+ M I G++ ++ + G W Sbjct: 480 CGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIGILTEEYAGHFPTW--- 536 Query: 344 VAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ 403 +AP + ++NI + C K+ + ++ V D E+IG + L P Sbjct: 537 LAPTQAVILNITDKQS---EYCTKL-QKTARNAIRVKPDLRNEKIGFKIREHTLKRVPYM 592 Query: 404 VIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++VG K + +V ++ R MS+E+ + Sbjct: 593 LVVGDKEMEAGEVAVRTRKGDDLGKMSIEDFL 624 >gi|113460987|ref|YP_719054.1| threonyl-tRNA synthetase [Haemophilus somnus 129PT] gi|123031343|sp|Q0I3M2|SYT_HAES1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|112823030|gb|ABI25119.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Haemophilus somnus 129PT] Length = 642 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 83/411 (20%), Positives = 148/411 (36%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW +G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + I+ G I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFTDIFVKLSTRPEKRIGED-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 V+ D E + + + +++ I E A Y + Sbjct: 432 ----VMWDRAEQGLANA-------LKHNGLEYE-------IQEGEGAFYGPKIEFALRDC 473 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D R + G I ++LP + AT+ D M I G++ Sbjct: 474 LD----------REWQCGTI---QLDFALPGRLDATYVAEDNARRTPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +I + G +P +AP + ++NI D +K+ + S+ G V D Sbjct: 521 FIGIITEEYAG---FFPTWLAPIQAVVMNITDSQA---DYVQKVVKQFSEAGLRVKADIR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++G + L P ++ G K + ++K+ ++ R S+EE + Sbjct: 575 NEKVGFKIREHTLRRVPYMLVCGDKEIVENKIAVRTRKGTDLGTFSVEEFV 625 >gi|188025947|ref|ZP_02960307.2| hypothetical protein PROSTU_02247 [Providencia stuartii ATCC 25827] gi|188021023|gb|EDU59063.1| hypothetical protein PROSTU_02247 [Providencia stuartii ATCC 25827] Length = 653 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 85/430 (19%), Positives = 158/430 (36%), Gaps = 60/430 (13%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + Y L + + RD +L L + + + G+ W G + +R + Sbjct: 241 NAYLLRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWTIFRELETFVRTKLKA 298 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW +G +++Y M + N + + P + IF +K Sbjct: 299 YNYQEVKGPFMMDRVLWERTGHWENYKDAMFTTSSENREYCV-KPMNCPGHVQIFNQGLK 357 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F T + Sbjct: 358 SYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIF-CTEDQILSEVTDCIKMIY 416 Query: 183 RIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPI-----PS 234 ++ G + I ++ + P IG D + DT E + ++ D I P Sbjct: 417 DVYATFGFEKIVVKLSTRPEKRIGTD------DMWDTAEADL--AQALKDQGIEFEYQPG 468 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 E + I L+D L R + G + + Sbjct: 469 EGAFYGPKIEFT--------------------LYDCLD-------RAWQCGTV---QLDF 498 Query: 295 SLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 LP ++A++ G + + V + +G++ ++ + G +P +AP ++ + Sbjct: 499 FLPGRLNASYVGENNERIVPVMIHRAVLGSLERFIGILTEEYAG---FFPTWLAPQQVVV 555 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 +NI D +++ ++L VG D E+IG + L P ++ G K V Sbjct: 556 MNIT---DTQADYVQELVSKLQSVGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEV 612 Query: 412 SDSKVEIKHR 421 KV ++ R Sbjct: 613 ESGKVSVRTR 622 >gi|73954351|ref|XP_536509.2| PREDICTED: similar to threonyl-tRNA synthetase [Canis familiaris] Length = 789 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 391 FFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIYNSRLWMTSGHWQHYS 450 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 451 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRIADFGVLHRNELSGALTGL 509 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 510 TRVRRFQQDDAHIF 523 >gi|218200880|gb|EEC83307.1| hypothetical protein OsI_28676 [Oryza sativa Indica Group] Length = 716 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 9/166 (5%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTG---MIHQHSKGIYSWLPLGQKALDNVNAIIR 58 +R K + +L+E A+ H+L+ +T HQ S G +LP G + + +R Sbjct: 336 KRLKEYKHLLEE----AKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLR 391 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 ++ G E+ P + + LW SG +Y KE + + + + P + +F Sbjct: 392 QQYRDRGYQEVLSPNIYNMQLWETSGHAANY-KENMFVFEIEKQEFGLKPMNCPGHCLMF 450 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 ++SYR LP + R+EL G+ R R F DA+ F Sbjct: 451 EHRVRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIF 496 >gi|157151414|ref|YP_001450960.1| seryl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] gi|189083593|sp|A8AYV0|SYS_STRGC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157076208|gb|ABV10891.1| seryl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] Length = 425 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|126729010|ref|ZP_01744825.1| threonyl-tRNA synthetase [Sagittula stellata E-37] gi|126710940|gb|EBA09991.1| threonyl-tRNA synthetase [Sagittula stellata E-37] Length = 660 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 23/201 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q G E++ P + LW SG ++ Y Sbjct: 261 MQEEAPGQVFWHPNGWTIYTTLQEYMRRKQRAGGYQEINTPQVVDRKLWEASGHWEKYQH 320 Query: 92 EML-------RLADRNDKAM---------IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 M R + +D P + +F +KSYR+LP + Sbjct: 321 HMFIVEVDESRDGEHDDATAKNKEQTRINALKPMNCPCHVQVFNQGLKSYRDLPLRLAEF 380 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR-IFHRLGLKSI 193 R E G+MR R F DA+ F E + F+ +L I+ LG + Sbjct: 381 GSCARYEPSGALHGIMRVRGFTQDDAHIF--CTEDQIEAECARFIEFLADIYRELGFPTF 438 Query: 194 PMRAESGP---IGGDLSHEFI 211 ++ + P +G + S +++ Sbjct: 439 EIKFATRPEKRVGTEESWDYV 459 >gi|328774228|gb|EGF84265.1| hypothetical protein BATDEDRAFT_8061 [Batrachochytrium dendrobatidis JAM81] Length = 581 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 11/176 (6%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML- 94 S G +LP G + + + +R E + G E+ P + + LW +SG + +Y +++ Sbjct: 184 SLGAPFFLPHGTRIIQRLTDFLRHEYRKYGFDEIVTPLVFNKSLWEKSGHWKNYKEDITV 243 Query: 95 -RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 +L D + +A+ P + +F S +SYR+LP + + R+E G+ R Sbjct: 244 DQLNDADIQAL--KPMNCPGHCLLFSSTSRSYRDLPIRYAEFSPLHRNEASGALTGLTRV 301 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMF----VSYLRIFHRLGLK-SIPMRAESGPIG 203 R+F D + F TP Y +I H ++ R ESG +G Sbjct: 302 RKFHQDDGHIF-CTPSQIAQEIQSTLKFIDTMYTKILHFPQYTLALSTRPESGHVG 356 >gi|325686987|gb|EGD29011.1| serine--tRNA ligase [Streptococcus sanguinis SK72] Length = 425 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|125623578|ref|YP_001032061.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363] gi|166222737|sp|A2RJ76|SYS_LACLM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|124492386|emb|CAL97327.1| SerS protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070342|gb|ADJ59742.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000] Length = 423 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 7/149 (4%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G EM P + + + +G+Y + ++ L D D+ + PT E +T+ + Sbjct: 183 DEHGKEGYTEMITPYMVNQESMFGTGQYPKFKEDTFELKD--DRGFVLIPTAEVPLTNYY 240 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I LP F + FR E R G++R +F + F P+ S Sbjct: 241 RGEILDGSELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPDQSYDEL 299 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 KM + I +LGL + +G +G Sbjct: 300 EKMTANAENILQKLGLAYRVVALSTGDMG 328 >gi|294933724|ref|XP_002780831.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239890922|gb|EER12626.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 296 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 13/160 (8%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + R ++ + GT ++ F+ +G+ + + S+G R + +I D K Sbjct: 47 CNGRAVQGATSHFLGTHFAKMFGIEFEDRNGEKKFAEQTSWGF-TTRSIGVMIMEHGDDK 105 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCR-----------DACEKIYARLSKVGCDVFWDDMG 385 G++ P VA ++ ++ I + + C+ +Y L+ G V DD Sbjct: 106 GLVLPPRVAEVQVVIVPIPPKGAGAQWSTAELKTMIGEKCKSLYEDLNANGVRVVLDDRD 165 Query: 386 EQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ G +F +L G PL++ VG+K + V R TG Sbjct: 166 DKTPGYKFNHWELKGVPLRIEVGAKDLEKGVVTFVRRNTG 205 >gi|167756637|ref|ZP_02428764.1| hypothetical protein CLORAM_02174 [Clostridium ramosum DSM 1402] gi|237733925|ref|ZP_04564406.1| threonyl-tRNA synthetase [Mollicutes bacterium D7] gi|167702812|gb|EDS17391.1| hypothetical protein CLORAM_02174 [Clostridium ramosum DSM 1402] gi|229383006|gb|EEO33097.1| threonyl-tRNA synthetase [Coprobacillus sp. D7] Length = 577 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 6/177 (3%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ +++ G+ +LP G + + EE + G + P + S +LW SG +++Y Sbjct: 195 MMSEYAPGMPFFLPKGMILRNTLEQFWYEEHAKEGYEFIKTPIMMSRELWETSGHWENY- 253 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + + +D+ P + ++++ + SY++LP ++ R E G+ Sbjct: 254 KEDMYTSMVDDREFAIKPMNCPGSLLVYKNSLHSYKDLPLRMGELGQVHRHEASGALNGL 313 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIG 203 R R F DA+ + +TP+ + ++ R++ L L + R E IG Sbjct: 314 FRVRTFTQDDAHIY-MTPDQIEGEIIRLINFIDRVYGSLNLSYEIELSTRPEKKYIG 369 >gi|116512562|ref|YP_811469.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] gi|123025253|sp|Q02XG6|SYS_LACLS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116108216|gb|ABJ73356.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] Length = 423 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 7/149 (4%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G EM P + + + +G+Y + ++ L D D+ + PT E +T+ + Sbjct: 183 DEHGKEGYTEMITPYMVNQESMFGTGQYPKFKEDTFELKD--DRGFVLIPTAEVPLTNYY 240 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I LP F + FR E R G++R +F + F P+ S Sbjct: 241 RGEILDGSELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPDQSYDEL 299 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 KM + I +LGL + +G +G Sbjct: 300 EKMTANAENILQKLGLAYRVVALSTGDMG 328 >gi|312601357|gb|ADQ90612.1| Prolyl-tRNA synthetase [Mycoplasma hyopneumoniae 168] Length = 290 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/143 (18%), Positives = 66/143 (46%), Gaps = 2/143 (1%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R ++ + G ++ +K + K S+G+ + R++ A++ D G+I Sbjct: 33 RALQSATAHFLGQNFAKNFEIFYKNKENKSQIPFQTSWGL-STRLIGAIVMVHSDDNGLI 91 Query: 340 WPDSVAPFKISLIN-IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 +P +AP ++ ++ +Q + ++I L DD +QIG + +++ Sbjct: 92 FPPKIAPIQVDILEFFSKKNQEVKIFSKRIAKILKNAKISYKIDDTDQQIGYKINNSEVH 151 Query: 399 GFPLQVIVGSKFVSDSKVEIKHR 421 G P+++ +G V ++++ + R Sbjct: 152 GAPIRIEIGPNEVKNNQICLVRR 174 >gi|237842879|ref|XP_002370737.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii ME49] gi|211968401|gb|EEB03597.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii ME49] gi|221485712|gb|EEE23993.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii GT1] gi|221502920|gb|EEE28630.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii VEG] Length = 711 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 9/158 (5%) Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +PEN RGI+ GT ++ F+ +G V S+G R + +I Sbjct: 428 IPEN----GRGIQAATSHLLGTNFAKMFEIEFEDEEGHKRLVHQTSWGC-TTRSLGVMIM 482 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD---ACEKIYARLSKVGCDVFWDDMGEQ 387 + D KG++ P VA ++ +I I D+ + C ++ L K V DD Sbjct: 483 THGDDKGLVIPPRVASVQVVIIPILFKDENTGEILGKCRELKTMLEKADIRVRIDDRSNY 542 Query: 388 I-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 G ++ ++ G PL++ +G K ++ + R TG Sbjct: 543 TPGWKYNHWEVKGVPLRLELGPKDLAKGTARVVRRDTG 580 >gi|324994145|gb|EGC26059.1| serine--tRNA ligase [Streptococcus sanguinis SK678] Length = 425 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|310796673|gb|EFQ32134.1| prolyl-tRNA synthetase [Glomerella graminicola M1.001] Length = 565 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 5/129 (3%) Query: 65 GAIEMSVPT-LQSADLWVESGRYDSYGKEMLRLADRNDK----AMIYGPTHEEVMTDIFR 119 G E S P L S L E + + E+ + DK + PT E VM + Sbjct: 116 GVDETSFPMFLSSKSLEKEKDHVEGFAPELAWVTKAGDKDLEVPVAVRPTSEAVMYPYYS 175 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 I+S+R+LPF Q R E + +R+REFL ++ ++ LT E + ++ Sbjct: 176 KWIRSHRDLPFRLNQWNSVVRWEAKQTTPFLRTREFLWQEGHTAHLTEELAGKEVLEILE 235 Query: 180 SYLRIFHRL 188 Y ++ +L Sbjct: 236 LYAGVYEQL 244 Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 11/167 (6%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGAD--GKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 + RGI+ G +S T + D G+ +V S+G+ + RV+ ++ D Sbjct: 276 NGRGIQGATSHCLGQNFSKMFDITVEDPDKKGEKIHVWQNSWGL-STRVIGVMVMIHGDD 334 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVC-------RDACEKIYARLSKVGCDVFWDDM-GEQ 387 KG++ P +A ++ LI + + D + + L K G D G Sbjct: 335 KGLVLPPRIAKVQVVLIAVGITAKTTPEDRKKLEDKVDDLRNELRKAGVRAESDLRDGYT 394 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +F +L G PL++ G K + V R TG + ++L E+ Sbjct: 395 PAWKFNEWELRGVPLRLEFGPKDAAKEVVAFARRDTGEKGSVALAEL 441 >gi|114559273|ref|XP_001168878.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 6 [Pan troglodytes] Length = 684 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 20/170 (11%) Query: 17 DAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +AE+ H+ + + + H+ S G +LP G + + + A IR E G E+ PT Sbjct: 296 EAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPT 355 Query: 74 LQSADLWVESGRYDSYGKEMLRL----ADRNDKA------------MIYGPTHEEVMTDI 117 L S LW +SG ++ Y ++M + +DR + + P + + Sbjct: 356 LFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLM 415 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLT 166 F +S+R LP R E G+ R R F DA+ F T Sbjct: 416 FAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTT 465 >gi|195952891|ref|YP_002121181.1| threonyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] gi|195932503|gb|ACG57203.1| threonyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 637 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 86/427 (20%), Positives = 157/427 (36%), Gaps = 61/427 (14%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM 93 Q G+ WLP G V ++E+ + P + + LW SG Y + M Sbjct: 258 QVGPGLIIWLPKGAILRQVVEDYLKEKHRALNYQFVYTPHVGKSTLWETSGHLSYYKENM 317 Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 +++ P + I++S I+S++ LP ++ +R E+ G+MR Sbjct: 318 FPGMKIEEESYYVKPMNCPFHMAIYKSKIRSHKELPIKIAELGTVYRYEMSGVLHGLMRV 377 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 R F DA+ F + +KS+ I L F V Sbjct: 378 RGFTQDDAHIFCKEED---------------------VKSV--------IKETLELAFDV 408 Query: 213 LADTG--ETQVFCSKDFMDFPIPSEN---------TDFDDIISLNSIVEQWTAPYAATSD 261 L D G + Q+F S D EN + + I E A Y D Sbjct: 409 LKDFGFYDYQIFISTKPKDAIGTEENWKISESALKESLEALDKTYEIDEGGGAFYGPKID 468 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH--YVQMGSYGI 319 + K+ D++ + S + F ++ L T+ G D K H Y+ + + Sbjct: 469 I---KIKDAIGRFWQCST----IQFDFNLPERFDL----TYVGEDNKKHRPYIIHRAL-L 516 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G++ V+ + G IW ++P + ++I I D ++++ L Sbjct: 517 GSIERFTGVLIEHYAGHLPIW---LSPIQAAIIPIADRH---LDYAKEVFELLKVQNIRT 570 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 + DD E++ ++ +L P+ ++VG K V + ++ + + M + + I Sbjct: 571 YIDDRPERMNAKIRDNELQKIPILLVVGDKEVQEKTFSVRSKNEEFQGVMGIYDFIEKLK 630 Query: 440 HRFSNNR 446 N R Sbjct: 631 TAIQNKR 637 >gi|53728893|ref|ZP_00134603.2| COG0441: Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207707|ref|YP_001052932.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20] gi|166223315|sp|A3MYU1|SYT_ACTP2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|126096499|gb|ABN73327.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 643 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 81/397 (20%), Positives = 143/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW +G + +Y Sbjct: 256 MQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTRPENRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E D + + + ++ I E A Y + Sbjct: 432 ----AMWDRAE-------DGLAKALTANGLSYE-------IQEGEGAFYGPKIEFALRDC 473 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGAD-GKDHYVQMGSYGIGAMRV 324 D R + G I ++LP + A++ D G+ V + +G++ Sbjct: 474 LD----------REWQCGTI---QLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +I + G +P +AP + ++NI D +K+ LS G V D Sbjct: 521 FIGIITEEYAG---FFPTWLAPTQAVVMNITDSQA---DYVQKVTKALSDAGIRVKSDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++G + L P ++ G K + KV ++ R Sbjct: 575 NEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRTR 611 >gi|297792591|ref|XP_002864180.1| hypothetical protein ARALYDRAFT_495320 [Arabidopsis lyrata subsp. lyrata] gi|297310015|gb|EFH40439.1| hypothetical protein ARALYDRAFT_495320 [Arabidopsis lyrata subsp. lyrata] Length = 542 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 9/108 (8%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GKE+ ++ ++ PT E ++ +F I SYR+LP Q R E+R + Sbjct: 157 GKEL-------EEKLVVRPTSETIVNHMFTQWIHSYRDLPLMINQWANVTRWEMRTK-PF 208 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI-FHRLGLKSIPMR 196 +R+ EFL ++ ++ TPE ++ +M Y R F + IP R Sbjct: 209 IRTLEFLWQEGHTAHATPEEAEKEAKQMIEIYTRFAFEHTAIPVIPGR 256 >gi|170036087|ref|XP_001845897.1| threonyl-tRNA synthetase [Culex quinquefasciatus] gi|167878588|gb|EDS41971.1| threonyl-tRNA synthetase [Culex quinquefasciatus] Length = 699 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G + P G + + IR E + G E+ P + +A LW SG + Y Sbjct: 312 FFHELSPGSCFFQPKGAHIYNTLMNFIRAEYRKRGFQEVISPNIYNAKLWQTSGHWQHYA 371 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + IF +S+R LP + R+EL G+ Sbjct: 372 ENMFSF-ESEKETFALKPMNCPGHCLIFDHRNRSWRELPLRMADFGVLHRNELSGALTGL 430 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 431 TRVRRFQQDDAHIF 444 Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGC 377 +G++ + A++ ++ GK WP ++P +I ++ + A+D+ +K+ RL G Sbjct: 571 LGSVERMIAILTENYAGK---WPFWLSPRQIMVVPVGPAYDEYA----DKVRLRLHDAGF 623 Query: 378 DVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G+ + + A L F ++VG K S V ++ R + ++S+EE++ Sbjct: 624 MAEADLDAGDTMNKKIRNAQLAQFNFILVVGEKERSSETVNVRTRDNKVHGEVSVEELL 682 >gi|189424928|ref|YP_001952105.1| threonyl-tRNA synthetase [Geobacter lovleyi SZ] gi|189421187|gb|ACD95585.1| threonyl-tRNA synthetase [Geobacter lovleyi SZ] Length = 646 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 89/398 (22%), Positives = 156/398 (39%), Gaps = 63/398 (15%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G W P G + R+E + + P + +LW SG YD+Y +E + Sbjct: 273 GFAIWHPKGAMLRTLLEDFERKEHLKRDYDIVVGPQILKTELWQRSGHYDNY-RENMYFT 331 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + ++++ P + I++S ++SYR+LP ++++ R E G++R R F Sbjct: 332 EVDEQSFGVKPMNCLSHMMIYKSQLRSYRDLPQRYFELGTVHRHERAGVLHGLLRVRCFT 391 Query: 157 MKDAYSFDLTPEGSKHSYNKM--FVS-YLRIF---HRLGLKSIPMRAESGPIGGDLSHE- 209 DA+ TPE + FVS + IF + + L + P ++ IG D E Sbjct: 392 QDDAHIL-CTPEQLDAEIKGVLKFVSDVMGIFGFEYEMELSTRPEKS----IGSDEDWER 446 Query: 210 -----FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 L DTG DF I + F Y D+ Sbjct: 447 ATGALLGALKDTGR----------DFEINEGDGAF----------------YGPKIDI-- 478 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMR 323 KL D L ++R I+ F ++ L T+ +DG K V + +G++ Sbjct: 479 -KLRDCL--DRRWQCATIQCD--FTLPERFDL----TYVASDGEKKRPVMVHRVILGSIE 529 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 V+ G +W +AP + ++ + +Q+ +++Y +L G V D Sbjct: 530 RFIGVLIEHFAGNFPLW---LAPVQAVVLTV-TDNQI--PYAQEVYKQLRSAGIRVQEDL 583 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++ + A L P +++G K V V + R Sbjct: 584 RNEKLNFKIREAQLQKIPYMLVIGDKEVEQGTVTPRFR 621 >gi|296814972|ref|XP_002847823.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238840848|gb|EEQ30510.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 739 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 S G LP G K + + ++R E + G E+ P + +W +SG + Y +M + Sbjct: 319 SPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFK 378 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 L D + P + +F +SYR LP + R+E G+ R R+ Sbjct: 379 L-DVEKRDWALKPMNCPGHCIMFGHRERSYRELPLRMADFGVLHRNEASGALHGLTRVRK 437 Query: 155 FLMKDAYSF 163 F D + F Sbjct: 438 FQQDDTHIF 446 >gi|254172667|ref|ZP_04879342.1| glycyl-tRNA synthetase [Thermococcus sp. AM4] gi|214033596|gb|EEB74423.1| glycyl-tRNA synthetase [Thermococcus sp. AM4] Length = 569 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 11/145 (7%) Query: 100 NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKD 159 + K + T + + + R + + LPF +QI +R+E+ PR G++R REF + Sbjct: 156 DQKGYLRPETAQGMFVNFKRLNAFARNKLPFGVFQIGKAYRNEISPRQGMLRLREFTQAE 215 Query: 160 AYSFDLTPEGSKHS-YNKMFVSYLRIF---HRL-GLKSIPMRAESGPIGGDLSHEFIVLA 214 A F P+ ++H ++++ LR++ H+L GL I + AE G + + F Sbjct: 216 AEIF-FNPKETEHPHFDEVKDEVLRLYPIEHQLKGLGEIELTAEEAVKKGYIMNTFFAY- 273 Query: 215 DTGETQVFCSKDFMDFPIPSENTDF 239 V + +D IP E F Sbjct: 274 ----YMVMVKRTLLDIGIPEEKIRF 294 >gi|157115843|ref|XP_001658309.1| threonyl-tRNA synthetase [Aedes aegypti] gi|108883479|gb|EAT47704.1| threonyl-tRNA synthetase [Aedes aegypti] Length = 716 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G + P G + + IR+E + G E+ P + +A LW SG + Y + Sbjct: 330 FHELSPGSCFFQPKGAHIYNTLMNFIRDEYRKRGFQEVITPNIYNAKLWQTSGHWQHYAE 389 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + P + +F +S+R LP + R+EL G+ Sbjct: 390 NMFSFESEKE-TFALKPMNCPGHCLMFDHRNRSWRELPLRMADFGVLHRNELSGALTGLT 448 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 449 RVRRFQQDDAHIF 461 Score = 36.6 bits (83), Expect = 7.8, Method: Compositional matrix adjust. Identities = 26/118 (22%), Positives = 58/118 (49%), Gaps = 7/118 (5%) Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G++ + A++ S+ GK WP ++P ++ ++ + D +K+ RL + G Sbjct: 588 LGSVERMIAILTESYAGK---WPFWLSPRQVMVVPVGPQ---YDDYADKVRQRLHEAGFM 641 Query: 379 VFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D D G+ + + A L F ++VG K S V ++ R + ++S+++++ Sbjct: 642 AEADLDAGDTMNKKIRNAQLAQFNFILVVGEKERSSETVNVRTRDNKVHGEVSVDDLV 699 >gi|13358098|ref|NP_078372.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170761869|ref|YP_001752619.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920446|ref|ZP_02690665.2| threonyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508529|ref|ZP_02958053.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701866|ref|ZP_02971526.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|13959578|sp|Q9PPV6|SYT_UREPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083629|sp|B1AJH5|SYT_UREP2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|11271125|pir||H82878 threonyl-tRNA synthetase UU534 [imported] - Ureaplasma urealyticum gi|6899538|gb|AAF30947.1|AE002152_6 threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827446|gb|ACA32708.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902899|gb|EDT49188.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675966|gb|EDT87871.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701170|gb|EDU19452.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 580 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ WLP G + V I E + + + P L S DL+ SG +D Y + Sbjct: 198 QGLPIWLPNGTIIKNQVQKFINEVEFQFNFDTVITPILGSIDLYKTSGHWDHYKDNIFSP 257 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 +++ ++ P T ++ + ++SYR+LP + + R E G R RE Sbjct: 258 VQIDNEILVLRPMTCPHHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLTGFERVREM 317 Query: 156 LMKDAYSF 163 +++D + F Sbjct: 318 ILEDCHVF 325 >gi|319942329|ref|ZP_08016644.1| threonyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] gi|319804202|gb|EFW01102.1| threonyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] Length = 636 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 52/135 (38%), Gaps = 10/135 (7%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 GM+ H+KG W + Q +R G E+ P L LW SG + Y Sbjct: 261 GMVFWHAKGWALWQVIEQ--------FMRRVYQDNGYEEVKAPQLLDRSLWERSGHWAKY 312 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M N + P + IF S ++SYR+LP + R+E G Sbjct: 313 RDNMFTTESEN-RYYALKPMNCPGHIQIFNSKLRSYRDLPLRIGEFGQCHRNESSGSLHG 371 Query: 149 VMRSREFLMKDAYSF 163 +MR R F D + F Sbjct: 372 LMRVRGFTQDDGHIF 386 >gi|313885013|ref|ZP_07818765.1| threonine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] gi|312619704|gb|EFR31141.1| threonine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] Length = 651 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 4/151 (2%) Query: 31 MIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI Q + G+ WLP G + I +++ G + P + DL+ SG + Y Sbjct: 254 MISQEAGSGLPFWLPKGATIRRVIERYIMDKEIALGYEHVYTPVMAKTDLYKTSGHWAHY 313 Query: 90 GKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF- 147 +M D D M + P + I+++ I SYR LP ++ + R E Sbjct: 314 KDDMFPPMDMGDGEMLVLRPMNCPHHMLIYKNEIHSYRELPIRIAELGMMHRYEKSGALS 373 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 G+ R RE + D++ F + P+ K + ++ Sbjct: 374 GLQRVREMTLNDSHIF-VRPDQIKDEFKRVL 403 Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 9/138 (6%) Query: 301 TFKGADGKDHY--VQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ G DG++ + V + + M R VA +IE KG +P +AP + L+ + Sbjct: 502 TYVGEDGQNTHRPVVIHRGVVSTMERFVAYLIEEY---KGA-FPTWLAPVQAILLPVSPE 557 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E+IY L + G V D E++G + A P Q+++G + V D V Sbjct: 558 HH--GDRVEEIYHALQEAGFRVEMDLRNEKLGYKIREAQTSKIPYQIVIGDQEVEDGTVN 615 Query: 418 IKHRLTGIREDMSLEEVI 435 I+ +SLE+ I Sbjct: 616 IRRYGAQDSNSVSLEDFI 633 >gi|325578419|ref|ZP_08148554.1| threonine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] gi|325160155|gb|EGC72284.1| threonine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] Length = 643 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G + +YG Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYGD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFQNIQVKLSTRPEKRIGAD 431 >gi|168334535|ref|ZP_02692696.1| threonyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B'] Length = 635 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 84/399 (21%), Positives = 157/399 (39%), Gaps = 48/399 (12%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G K + + I + + G + P + DL+ SG + Y M + Sbjct: 241 QGLPLIMPKGAKVIQTLQRWIEDLEEENGYLLTKTPNMAKNDLYKISGHWSHYKDGMFVM 300 Query: 97 A--DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 +++D+ + P I++ SYR+LP + + R+E G++R R Sbjct: 301 GNEEKDDEIIALRPMTCPFQFMIYKQEQHSYRDLPIRYAETATLARNESSGEMHGLIRVR 360 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL-KSIPMR-AESGPIGGDLSHEFI 211 +F + D + TP+ + + + I LG+ K I R ++ P + ++I Sbjct: 361 QFTLADGHIV-CTPDQLETEFKNVVDLIKYIMKTLGIDKDISYRFSKWSP---EFKEKYI 416 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + ET K+ +D D+ + E A Y DV + + Sbjct: 417 DNPEAWETTETIMKNILD----HLKIDYKE-------AENEAAFYGPKLDVQFKNV---- 461 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD------HYVQMGSYGIGAMRVV 325 K + +++ F ++++ T+ ADG+ H +G Y R + Sbjct: 462 -HGKEDTIITVQID--FALAERFNM----TYVDADGEKKLPYIIHRSSLGCYE----RTL 510 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A +IE +P +AP + ++ I D+ A E + A L K V D Sbjct: 511 AMLIEKYAGA----FPTWLAPTAVKILPIS--DKYADYAAE-VAATLRKNKILVEIDQRT 563 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+IG + A P V+VG+ + + V ++ R G Sbjct: 564 EKIGYKIREARNERVPYIVVVGADEMENKTVSVRSRQKG 602 >gi|21911052|ref|NP_665320.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28895262|ref|NP_801612.1| seryl-tRNA synthetase [Streptococcus pyogenes SSI-1] gi|30173169|sp|Q8K635|SYS_STRP3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|21905261|gb|AAM80123.1| putative seryl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28810508|dbj|BAC63445.1| putative seryl-tRNA synthetase [Streptococcus pyogenes SSI-1] Length = 425 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 8/136 (5%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G E+ P + + D +G+Y + ++ LAD N + PT E +T+ + Sbjct: 183 DEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYY 239 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I + LP F + FR E R G++R +F + F PE S Sbjct: 240 RGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQEL 298 Query: 175 NKMFVSYLRIFHRLGL 190 KM + I +LGL Sbjct: 299 EKMTANAENILQKLGL 314 >gi|297297312|ref|XP_001086926.2| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like [Macaca mulatta] Length = 708 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y + Sbjct: 347 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 406 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 407 MFTFEIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPMRFADFGVLHRNELSGTLSGLTR 465 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 466 VRRFQQDDAHIF 477 >gi|289064339|gb|ADC80545.1| proline aminoacyl-tRNA synthetase [Toxoplasma gondii] Length = 783 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 9/158 (5%) Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +PEN RGI+ GT ++ F+ +G V S+G R + +I Sbjct: 549 IPEN----GRGIQAATSHLLGTNFAKMFEIEFEDEEGHKRLVHQTSWGC-TTRSLGVMIM 603 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD---ACEKIYARLSKVGCDVFWDDMGEQ 387 + D KG++ P VA ++ +I I D+ + C ++ L K V DD Sbjct: 604 THGDDKGLVIPPRVASVQVVIIPILFKDENTGEILGKCRELKTMLEKADIRVRIDDRSNY 663 Query: 388 I-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 G ++ ++ G PL++ +G K ++ + R TG Sbjct: 664 TPGWKYNHWEVKGVPLRLELGPKDLAKGTARVVRRDTG 701 >gi|322377063|ref|ZP_08051555.1| serine--tRNA ligase [Streptococcus sp. M334] gi|321281776|gb|EFX58784.1| serine--tRNA ligase [Streptococcus sp. M334] Length = 424 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 26/184 (14%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G E+ P + + D +G+Y + ++ L+D N + PT E +T+ + Sbjct: 183 DEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDSN---YVLIPTAEVPLTNYY 239 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I ++LP F + FR E R G++R +F + F PE S Sbjct: 240 RDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEEL 298 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIP 233 KM + I +L L P R +V TG+ +K + ++ IP Sbjct: 299 EKMTANAENILQKLNL---PYR--------------VVALSTGDMGFSAAKTYDLEVWIP 341 Query: 234 SENT 237 ++NT Sbjct: 342 AQNT 345 >gi|301156314|emb|CBW15785.1| threonyl-tRNA synthetase [Haemophilus parainfluenzae T3T1] Length = 643 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G + +YG Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYGD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFQNIQVKLSTRPEKRIGAD 431 >gi|294933722|ref|XP_002780830.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239890921|gb|EER12625.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 341 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 13/160 (8%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + R ++ + GT ++ F+ +G+ + + S+G R + +I D K Sbjct: 47 CNGRAVQGATSHFLGTHFAKMFGIEFEDRNGEKKFAEQTSWGF-TTRSIGVMIMEHGDDK 105 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCR-----------DACEKIYARLSKVGCDVFWDDMG 385 G++ P VA ++ ++ I + + C+ +Y L+ G V DD Sbjct: 106 GLVLPPRVAEVQVVIVPIPPKGAGAQWSTAELKTMIGEKCKSLYEDLNANGVRVVLDDRD 165 Query: 386 EQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ G +F +L G PL++ VG+K + V R TG Sbjct: 166 DKTPGYKFNHWELKGVPLRIEVGAKDLEKGVVTFVRRNTG 205 >gi|313888403|ref|ZP_07822071.1| threonine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845600|gb|EFR32993.1| threonine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 636 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 87/421 (20%), Positives = 156/421 (37%), Gaps = 51/421 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 +H+ G + P G +N+ R + G E+ P + + LW SG +D Y K Sbjct: 254 MHEEGPGFPFFHPNGMILRNNLLNWWRGVLDENGYGEILTPIILNEALWHRSGHWDHY-K 312 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 + + +D P + ++ S+ SYR+LP + + R EL G+ Sbjct: 313 DNMYFTKIDDGDYAVKPMNCPGSILVYNSNKHSYRDLPIRLAEYGIVHRHELSGALHGLF 372 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK-SIPMRAESGPIGGDLSHE 209 R R F DA+ + L + K KM ++ G K SI + G+L E Sbjct: 373 RVRTFTQDDAHVYCLFSQ-VKDEVFKMIDLADYLYSTFGFKYSIELSTRPDDYMGEL--E 429 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 LA+ + K+ +P +I E A Y D H E Sbjct: 430 AWNLAEKSLKEALEEKN-----LPY------------TINEGDGAFYGPKIDFHLEDA-- 470 Query: 270 SLPENKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADG-KDHYVQMGSYGIGAMR 323 +G + GT + LP T+ +G + V + +G++ Sbjct: 471 --------------IGRTWQCGTIQLDFQLPENFDLTYVDENGERQRPVMLHRALLGSVE 516 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ GK +W ++P ++ +I + +D E I +L G V D Sbjct: 517 RFMGILIEHFAGKFPLW---LSPVQVEVIPVSDK---FKDFAESIADKLHAAGLRVHLDG 570 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E++G + A + +++G K + K+ ++ R +D+ ++E I Sbjct: 571 RAEKVGYKIREAQVKKINYMLVIGEKEETSGKLSVRKRNGEEVQDVDVDEFIASLKEEIK 630 Query: 444 N 444 N Sbjct: 631 N 631 >gi|307245030|ref|ZP_07527126.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307253984|ref|ZP_07535834.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258439|ref|ZP_07540179.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306854073|gb|EFM86282.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863062|gb|EFM95006.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867501|gb|EFM99349.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 643 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 81/397 (20%), Positives = 143/397 (36%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW +G + +Y Sbjct: 256 MQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTRPENRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E D + + + ++ I E A Y + Sbjct: 432 ----AMWDRAE-------DGLAKALTANGLSYE-------IQEGEGAFYGPKIEFALRDC 473 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGAD-GKDHYVQMGSYGIGAMRV 324 D R + G I ++LP + A++ D G+ V + +G++ Sbjct: 474 LD----------REWQCGTI---QLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +I + G +P +AP + ++NI D +K+ LS G V D Sbjct: 521 FIGIITEEYAG---FFPTWLAPTQAVVMNITDSQA---DYVQKVTKALSDAGIRVKSDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++G + L P ++ G K + KV ++ R Sbjct: 575 NEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRTR 611 >gi|56807927|ref|ZP_00365750.1| COG0172: Seryl-tRNA synthetase [Streptococcus pyogenes M49 591] gi|209559859|ref|YP_002286331.1| seryl-tRNA synthetase [Streptococcus pyogenes NZ131] gi|238065107|sp|B5XHX4|SYS_STRPZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|209541060|gb|ACI61636.1| Seryl-tRNA synthetase [Streptococcus pyogenes NZ131] Length = 425 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 8/136 (5%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G E+ P + + D +G+Y + ++ LAD N + PT E +T+ + Sbjct: 183 DEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYY 239 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I + LP F + FR E R G++R +F + F PE S Sbjct: 240 RGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQEL 298 Query: 175 NKMFVSYLRIFHRLGL 190 KM + I +LGL Sbjct: 299 EKMTANAENILQKLGL 314 >gi|260914069|ref|ZP_05920542.1| threonine-tRNA ligase [Pasteurella dagmatis ATCC 43325] gi|260631702|gb|EEX49880.1| threonine-tRNA ligase [Pasteurella dagmatis ATCC 43325] Length = 644 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G + +YG Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYGD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFENIQVKLSTRPEKRIGAD 431 >gi|160914239|ref|ZP_02076460.1| hypothetical protein EUBDOL_00249 [Eubacterium dolichum DSM 3991] gi|158433866|gb|EDP12155.1| hypothetical protein EUBDOL_00249 [Eubacterium dolichum DSM 3991] Length = 610 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 88/399 (22%), Positives = 156/399 (39%), Gaps = 53/399 (13%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ +++ G+ +LP G + + EE + + P + S +LW SG +D+Y Sbjct: 227 MMSEYAPGMPFFLPNGMILRNILENFWYEEHTKEHYQFIKTPIMMSKELWETSGHWDNY- 285 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + ++ +D+ P + +++ + SY++ P ++ R E G+ Sbjct: 286 KENMYISMVDDREFAIKPMNCPGALLAYKAGLHSYKDFPLRMGELGQVHRHEASGALNGL 345 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 R R F DA+ F + P+ + + RI+ LGL + R E I GDL Sbjct: 346 FRVRTFTQDDAHIF-MRPDQIESEVMSLISFIDRIYASLGLSYRIELSTRPEEKYI-GDL 403 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + I A C D+ + + F Y D H Sbjct: 404 A---IWEASEAALAAACKHAGKDYKVNPGDGAF----------------YGPKLDFH--- 441 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIGAM- 322 + DSL R + G I +LP T+ +DG K V + G++ Sbjct: 442 IKDSL-------GREWQCGTI---QLDMNLPERFDLTYVESDGSKARPVMLHRVIFGSIE 491 Query: 323 RVVAAVIE--SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 R + +IE + H +P +AP +I ++ + H + EK+ L + G Sbjct: 492 RFIGILIEHFAGH------FPTWLAPQQIMVVPV--HYEKHLSYAEKVNEMLVQNGFRSK 543 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D E++G + A L P Q+++G + V I+ Sbjct: 544 LDARNEKLGYRIREAQLAKIPYQIVLGDGEEENGTVTIR 582 >gi|117621181|ref|YP_856850.1| threonyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166223316|sp|A0KKP9|SYT_AERHH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|117562588|gb|ABK39536.1| threonyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 642 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR + E+ P + LW SG ++ Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGPFMMDRVLWERSGHWEKYAQ 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E + ++ G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIMEEVSACIRMVYDVYGTFGFENIVVKLSTRPEQRIGSD 431 >gi|15675591|ref|NP_269765.1| seryl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|71911296|ref|YP_282846.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS5005] gi|306826795|ref|ZP_07460097.1| serine--tRNA ligase [Streptococcus pyogenes ATCC 10782] gi|30173206|sp|Q99YE2|SYS_STRP1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|13622796|gb|AAK34486.1| putative seryl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|71854078|gb|AAZ52101.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS5005] gi|304431084|gb|EFM34091.1| serine--tRNA ligase [Streptococcus pyogenes ATCC 10782] Length = 425 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 8/136 (5%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G E+ P + + D +G+Y + ++ LAD N + PT E +T+ + Sbjct: 183 DEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYY 239 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I + LP F + FR E R G++R +F + F PE S Sbjct: 240 RGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQEL 298 Query: 175 NKMFVSYLRIFHRLGL 190 KM + I +LGL Sbjct: 299 EKMTANAENILQKLGL 314 >gi|19746699|ref|NP_607835.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS8232] gi|50914823|ref|YP_060795.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS10394] gi|30173174|sp|Q8NZN7|SYS_STRP8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|67461685|sp|Q5XAF1|SYS_STRP6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|19748923|gb|AAL98334.1| putative seryl-tRNA synthetase [Streptococcus pyogenes MGAS8232] gi|50903897|gb|AAT87612.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS10394] Length = 425 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 8/136 (5%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G E+ P + + D +G+Y + ++ LAD N + PT E +T+ + Sbjct: 183 DEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYY 239 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I + LP F + FR E R G++R +F + F PE S Sbjct: 240 RGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQEL 298 Query: 175 NKMFVSYLRIFHRLGL 190 KM + I +LGL Sbjct: 299 EKMTANAENILQKLGL 314 >gi|170717553|ref|YP_001784641.1| threonyl-tRNA synthetase [Haemophilus somnus 2336] gi|189083611|sp|B0UU42|SYT_HAES2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|168825682|gb|ACA31053.1| threonyl-tRNA synthetase [Haemophilus somnus 2336] Length = 642 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 83/411 (20%), Positives = 148/411 (36%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW +G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + I+ G I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFTDIFVKLSTRPEKRIGED-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 V+ D E + + + +++ I E A Y + Sbjct: 432 ----VMWDRAEQGLANA-------LKHNGLEYE-------IQEGEGAFYGPKIEFALRDC 473 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRV 324 D R + G I ++LP + AT+ D M I G++ Sbjct: 474 LD----------REWQCGTI---QLDFALPGRLDATYVAEDNARRTPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +I + G +P +AP + ++NI D +K+ + S+ G V D Sbjct: 521 FIGIITEEYAG---FFPAWLAPIQAVVMNITDSQA---DYVQKVVKQFSEAGLRVKADIR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++G + L P ++ G K + ++K+ ++ R S+EE + Sbjct: 575 NEKVGFKIREHTLRRVPYMLVCGDKEIVENKIAVRTRKGTDLGTFSVEEFV 625 >gi|94994938|ref|YP_603036.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS10750] gi|166223298|sp|Q1J594|SYS_STRPF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|94548446|gb|ABF38492.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS10750] Length = 425 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 8/136 (5%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G E+ P + + D +G+Y + ++ LAD N + PT E +T+ + Sbjct: 183 DEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYY 239 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I + LP F + FR E R G++R +F + F PE S Sbjct: 240 RGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQEL 298 Query: 175 NKMFVSYLRIFHRLGL 190 KM + I +LGL Sbjct: 299 EKMTANAENILQKLGL 314 >gi|94991059|ref|YP_599159.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS10270] gi|166223297|sp|Q1JFE4|SYS_STRPD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|94544567|gb|ABF34615.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS10270] Length = 425 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 8/136 (5%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G E+ P + + D +G+Y + ++ LAD N + PT E +T+ + Sbjct: 183 DEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYY 239 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I + LP F + FR E R G++R +F + F PE S Sbjct: 240 RGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQEL 298 Query: 175 NKMFVSYLRIFHRLGL 190 KM + I +LGL Sbjct: 299 EKMTANAENILQKLGL 314 >gi|182683380|ref|YP_001835127.1| seryl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|182628714|gb|ACB89662.1| seryl-tRNA synthetase [Streptococcus pneumoniae CGSP14] Length = 452 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 182 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 227 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 228 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 284 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 285 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 343 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 344 YRVVALSTGDMG 355 >gi|332359167|gb|EGJ36988.1| serine--tRNA ligase [Streptococcus sanguinis SK49] Length = 425 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQELEKMTANAENILKKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|71904134|ref|YP_280937.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS6180] gi|123639382|sp|Q48RS8|SYS_STRPM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|71803229|gb|AAX72582.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS6180] Length = 425 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 8/136 (5%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G E+ P + + D +G+Y + ++ LAD N + PT E +T+ + Sbjct: 183 DEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYY 239 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I + LP F + FR E R G++R +F + F PE S Sbjct: 240 RGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQEL 298 Query: 175 NKMFVSYLRIFHRLGL 190 KM + I +LGL Sbjct: 299 EKMTANAENILQKLGL 314 >gi|261855919|ref|YP_003263202.1| threonyl-tRNA synthetase [Halothiobacillus neapolitanus c2] gi|261836388|gb|ACX96155.1| threonyl-tRNA synthetase [Halothiobacillus neapolitanus c2] Length = 637 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W P G + +R +G E+ P + LW +SG +D+Y + Sbjct: 256 QEEAPGLVFWHPKGWALWQVIEQHMRGIYRSSGYDEIRCPQILDVSLWKKSGHWDNYQEN 315 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + +F + SYR+LP + + R+E G++R Sbjct: 316 MF-FTESEKRTFAVKPMNCPGHVQVFNHGLHSYRDLPIRYGEFGSCHRNEPSGALHGILR 374 Query: 152 SREFLMKDAYSF 163 R F D + F Sbjct: 375 VRGFTQDDGHIF 386 >gi|15673694|ref|NP_267868.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|281492294|ref|YP_003354274.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|30173210|sp|Q9CEX2|SYS_LACLA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|12724729|gb|AAK05810.1|AE006401_11 seryl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|281375958|gb|ADA65449.1| Seryl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|326407178|gb|ADZ64249.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 423 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 7/149 (4%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G EM P + + + +G+Y + ++ L D D+ + PT E +T+ + Sbjct: 183 DEHGKEGYTEMITPYMVNQESMFGTGQYPKFKEDTFELKD--DRGFVLIPTAEVPLTNYY 240 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I LP F + FR E R G++R +F + F P+ S Sbjct: 241 RGEILDGAELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPDQSYDEL 299 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 KM + I +LGL + +G +G Sbjct: 300 EKMTANAENILQKLGLAYRVVALSTGDMG 328 >gi|94989115|ref|YP_597216.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94993007|ref|YP_601106.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS2096] gi|166223295|sp|Q1JA99|SYS_STRPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166223296|sp|Q1JKF1|SYS_STRPC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|94542623|gb|ABF32672.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94546515|gb|ABF36562.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS2096] Length = 425 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 8/136 (5%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G E+ P + + D +G+Y + ++ LAD N + PT E +T+ + Sbjct: 183 DEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN---FVLIPTAEVPLTNYY 239 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I + LP F + FR E R G++R +F + F PE S Sbjct: 240 RGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQEL 298 Query: 175 NKMFVSYLRIFHRLGL 190 KM + I +LGL Sbjct: 299 EKMTANAENILQKLGL 314 >gi|307945488|ref|ZP_07660824.1| threonyl-tRNA synthetase [Roseibium sp. TrichSKD4] gi|307771361|gb|EFO30586.1| threonyl-tRNA synthetase [Roseibium sp. TrichSKD4] Length = 656 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 18/213 (8%) Query: 5 KYFLPILQENPRDAEIASH-KLMLRTGMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K +L +L+E AE H KL + H + G+ W G N+ + +R Sbjct: 237 KAYLHMLEE----AEKRDHRKLGREMDLFHFQEEGPGVVFWHDKGWTLFQNLVSYMRRRL 292 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTD 116 + E++ P + S LW SG + Y + M + D + P + Sbjct: 293 S-GDYQEVNAPQVLSTKLWETSGHWAWYKENMFAVQGADPEDEDTHVFALKPMNCPGHIQ 351 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IF+ +KSYR+LP + + R E G+MR R F DA+ F T E Sbjct: 352 IFKHGLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVF-CTDEQMAEECL 410 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 K+ L ++ G + I ++ + P +G D Sbjct: 411 KINDLILSVYEHFGFEKIVVKLSTRPEKRVGSD 443 >gi|297202644|ref|ZP_06920041.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] gi|197713219|gb|EDY57253.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] Length = 471 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 14/111 (12%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GKE+ ++ + PT E ++ D F ++SYR+LP Q R ELRPR Sbjct: 99 GKEL-------EEPAVVRPTSEMIINDYFSKWVQSYRDLPLLINQWANVVRWELRPRL-F 150 Query: 150 MRSREFLMKDAYSFDLTPEGSK----HSYNKMFVSYLRIFHRLGLKSIPMR 196 +R+ EFL ++ ++ T E ++ H + +++ ++ + L + +P R Sbjct: 151 LRTTEFLWQEGHTAHATQEDARAFASHIHRQVYEDFM--TNVLAMDVVPGR 199 >gi|145298933|ref|YP_001141774.1| threonyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|166223317|sp|A4SMA4|SYT_AERS4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|142851705|gb|ABO90026.1| threonyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 642 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + IR + E+ P + LW SG ++ Y + Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGPFMMDRVLWERSGHWEKYAQ 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 AMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E + ++ G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIMEEVSACIRMVYDVYGTFGFENIVVKLSTRPEQRIGSD 431 >gi|110598676|ref|ZP_01386941.1| threonyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] gi|110339729|gb|EAT58239.1| threonyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] Length = 657 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 6/132 (4%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + + + ++EEQ + G + + P + + +L+ SG Y Y L Sbjct: 273 GLPIWLPKGAIIRNELESFLKEEQRKRGYLPVYTPHIGNIELYKRSGHYPYYSDSQFPPL 332 Query: 95 RLADRNDKAMIY--GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 D + Y P + I+ S ++SYR+LP + +R E G++R Sbjct: 333 TYHDEEGRKEQYLLKPMNCPHHHLIYSSKMRSYRDLPIRLTEFGTVYRHEQSGELNGLVR 392 Query: 152 SREFLMKDAYSF 163 +R F D++ + Sbjct: 393 ARGFTQDDSHIY 404 >gi|332797162|ref|YP_004458662.1| threonyl-tRNA synthetase [Acidianus hospitalis W1] gi|332694897|gb|AEE94364.1| threonyl-tRNA synthetase [Acidianus hospitalis W1] Length = 542 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 87/412 (21%), Positives = 165/412 (40%), Gaps = 42/412 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ + P GQ + + ++E G E+ + LW SG Y+ Y +ML + Sbjct: 155 GLVLYHPKGQIIRNELIDYMKEINASMGYQEVYTTHVYRTILWKISGHYEMYKDKML-IF 213 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFL 156 +D+ + P + I++S +SY++LP F + +R E + +G++R R F Sbjct: 214 THDDEELGIKPMNCPAHILIYKSRTRSYKDLPIRFSEFGNVYRWEQKGELYGLLRVRGFT 273 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 D + F E + KM +S K++ + A+ G G D+ I L+ Sbjct: 274 QDDGHVF--LREDQLENEVKMLIS----------KTLEVLAKFGFKGDDVR---INLSTR 318 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLN---SIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + + + + N + + SLN + E+ A Y D + DSL Sbjct: 319 PDESIGTDEQWE----KATNALVNALRSLNLKYQVKEKEGAFYGPKIDFD---IRDSLGR 371 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAAVIESS 332 ++S ++ F ++ L + DG M I G++ A++ Sbjct: 372 WWQLSTIQVD----FNLPERFKL----EYVDKDGSKKRPVMVHRAIYGSIDRFLAILLEH 423 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 GK W ++P ++ ++ I R+ EK+ ++L V D E + + Sbjct: 424 FKGKLPTW---LSPIQVRILPINPE---VREYAEKVLSKLVSVKIRAEIDSEEETLSKRI 477 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 A G P +I+G K + V I+ R + + L++ ++ S N Sbjct: 478 KKAYDDGVPYILIIGKKEAESNSVTIRARGNIEVKGVPLDKCVDAISKEIQN 529 >gi|156552955|ref|XP_001603180.1| PREDICTED: similar to threonyl-tRNA synthetase [Nasonia vitripennis] Length = 859 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G + P G + + IR E + G E+ P + ++ LW SG + Y + Sbjct: 472 FHELSPGSCFFQPRGAHIYNTLVEFIRGEYKKRGFQEVVTPNIYNSKLWQTSGHWQHYSE 531 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M D + P + IF +S+R LP + R+EL G+ Sbjct: 532 NMFSF-DVEKETFALKPMNCPGHCMIFDVRNRSWRELPLRMADFGVLHRNELSGALTGLT 590 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 591 RVRRFQQDDAHIF 603 >gi|289617913|emb|CBI55490.1| unnamed protein product [Sordaria macrospora] Length = 497 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 16/206 (7%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +P E P ++ + + + T + +S G +LP G + + + +R++ G Sbjct: 46 VPAKPEAPDHRDLGTQQELFMTSI---YSPGSPIFLPNGARIFNRLVEYLRKQYVHYGFQ 102 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRL-------ADRNDKAMI--YG--PTHEEVMTD 116 E+ PT+ LW +SG ++Y +M + AD + + YG P + Sbjct: 103 EVITPTIYKKALWAKSGHLENYADDMFTVTSTSPSRADVTEAGEVDEYGLKPMNCPGHCL 162 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IF + +SYR+LP + R+E+ G+ R R F D + F P + + Sbjct: 163 IFAAQKRSYRDLPIRYADFSPLHRNEISGALSGLTRVRRFHQDDGHIF-CRPNQIEDEIS 221 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGP 201 K R++ L S ++ + P Sbjct: 222 KTLEFIRRVYKDFRLGSYRLKLSTRP 247 >gi|309776920|ref|ZP_07671890.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] gi|308915331|gb|EFP61101.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] Length = 580 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 85/415 (20%), Positives = 161/415 (38%), Gaps = 53/415 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M+ +++ G+ +LP G + + EE + + P + S +LW SG +++Y Sbjct: 196 MMSEYAPGMPFFLPNGMIIRNLLENFWYEEHTKENYQFIKTPIMMSKELWEVSGHWENY- 254 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + +D+ P + +F++ + SY++LP ++ R E G+ Sbjct: 255 KENMYTTMVDDREFAIKPMNCPGSLLVFKNGLHSYKDLPLRMGELGQVHRHEASGALNGL 314 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGDL 206 R R F DA+ F + P+ + ++ R++ GL + R E I GDL Sbjct: 315 FRVRTFTQDDAHIF-MRPDQIEGEVMRLIQFIDRVYSVFGLSYRIELSTRPEKKYI-GDL 372 Query: 207 S---HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 + LAD C ++ + + F Y D H Sbjct: 373 AIWEQSEKALADA------CVHAGKEYKVNPGDGAF----------------YGPKLDFH 410 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADG-KDHYVQMGSYGIG 320 + DSL R + G I +LP T+ DG K V + G Sbjct: 411 ---IKDSL-------GREWQCGTI---QLDMNLPERFDLTYVEKDGSKVRPVMLHRVIFG 457 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 ++ ++ G +W +AP ++S++ + H + + ++ +L +G Sbjct: 458 SIERFIGILIEHFAGHFPVW---LAPQQVSVVPV--HHEKHLEYANEVNEKLLALGYRSK 512 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D E++G + A L P Q+++G + + V ++ + M LE+ I Sbjct: 513 LDARNEKLGYRIREAQLSKIPYQLVIGDGEIENGSVTLRRAQSKKSLTMPLEDFI 567 >gi|153812461|ref|ZP_01965129.1| hypothetical protein RUMOBE_02860 [Ruminococcus obeum ATCC 29174] gi|149831386|gb|EDM86474.1| hypothetical protein RUMOBE_02860 [Ruminococcus obeum ATCC 29174] Length = 657 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 3/128 (2%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 +G+ +P G + + I +E+ + G + P + +DL+ SG +D Y M L Sbjct: 259 QGLPLIMPNGVIMMQELQRWIEDEETKRGYVRTKTPLMAKSDLYKISGHWDHYKDGMFVL 318 Query: 97 ADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 D ++ P ++++ SYR+LP + + FR+E G+ R R Sbjct: 319 GDEETDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYGETSTLFRNEDSGEMHGLTRVR 378 Query: 154 EFLMKDAY 161 +F + + + Sbjct: 379 QFTISEGH 386 >gi|171778068|ref|ZP_02919325.1| hypothetical protein STRINF_00160 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283050|gb|EDT48474.1| hypothetical protein STRINF_00160 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 425 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGSRFLFYKGLGARLERAIYNFM------LD--------EHAKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LA+ +D +I PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELAN-SDYVLI--PTAEVPLTNYYRGEILDGKELPVYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +LGL Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFS-KPETSYDELEKMVANAENILQKLGL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|15457932|gb|AAK99176.1| Seryl-tRNA synthetase [Streptococcus pneumoniae R6] Length = 445 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 175 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 220 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 221 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 277 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 278 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 336 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 337 YRVVALSTGDMG 348 >gi|154249412|ref|YP_001410237.1| threonyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] gi|154153348|gb|ABS60580.1| threonyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] Length = 638 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 2/129 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G+ +LP G L + ++ RE + G E+ P + LW +SG +D Y M Sbjct: 261 AAGMPIFLPYGMTVLKELMSLSRELHKKYGYKEVGTPLIMHEKLWRQSGHWDHYKNNMY- 319 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 ++ + P + I+++ SY++LP ++ R E G++R R Sbjct: 320 FTEKEEVTYAVKPMNCPGHILIYKNKPVSYKDLPIRLFEFGRVHRYERGGVLHGLLRVRT 379 Query: 155 FLMKDAYSF 163 F DA+ F Sbjct: 380 FTQDDAHIF 388 >gi|326492063|dbj|BAJ98256.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326499331|dbj|BAK06156.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 667 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 82/407 (20%), Positives = 153/407 (37%), Gaps = 50/407 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + ++ + G + P + ADLW SG D Y + M Sbjct: 291 GLVFWHPKGAIIRHILEDSWKQTHLQRGYDLLYTPHVAKADLWKISGHIDFYKENMYNQM 350 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D D+ P + +++ ++SYR+LP ++ +R EL G+ R R F Sbjct: 351 DVEDEPYQLRPMNCPYHILVYKRKLQSYRDLPIRVAELGTVYRYELSGALHGLFRVRGFT 410 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ F L + K + I + G ++ + + P +G D Sbjct: 411 QDDAHIFCLEDQ-IKDEIRGVLDLTEEILGQFGFRNYEVNLSTRPEKSVGSD-------- 461 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D E KD + DD +I E A Y D+ K+ D+L Sbjct: 462 -DIWEKATIALKDAL-----------DDKGWGYTIDEGGGAFYGPKIDL---KIEDALGR 506 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG---KDHYVQMGSYGIGAMRVVAAVIE 330 + S ++ ++LP D K + + +G++ ++ Sbjct: 507 KWQCSTVQVD----------FNLPERFDITYVDSHTEKKRPIMIHRAILGSLERFFGILI 556 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 ++ G +W +AP + ++ + ++ Q C + ++ +R + +V GE++ Sbjct: 557 ENYAGDFPLW---LAPTQARILPVTNNELQYCNEVASELKSR--GIRAEVC---HGERLP 608 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A+ PL +VG K V + I+ R G M ++ I+ Sbjct: 609 KLIRNAETQKVPLMAVVGPKEVEARTLTIRSRHNGEMGTMPVDNFIS 655 >gi|307719284|ref|YP_003874816.1| threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] gi|306533009|gb|ADN02543.1| threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] Length = 578 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 80/422 (18%), Positives = 154/422 (36%), Gaps = 48/422 (11%) Query: 32 IHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +H+ + G+ W P G + + RE+ G + P + A LW SG Y Sbjct: 193 VHEEAGPGLIYWHPKGARIRLEIENFWREQHLARGYEVLYTPHIGKAWLWETSGHLSFYK 252 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + I+++ ++SYR LP + ++ +R E G+ Sbjct: 253 ENMYAPMEVDKSDYYIKPMNCPFHIMIYKTRLRSYRELPLRWAELGTVYRYERSGVLHGL 312 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R R F DA+ F TPE + + L ++ G + + P E Sbjct: 313 LRVRGFTQDDAHIF-CTPEQIEDEILETLRFSLFMWETFGFSDVKAYLSTRPEKSVGEPE 371 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDF----DDIISLNSIVEQWTAPYAATSDVHNE 265 A TG + ++ +D+ + F DI +++ +W TS + Sbjct: 372 RWEQA-TGSLRKAIEREGLDYEVDEGGGAFYGPKIDIKVRDALGREWQ-----TSTIQ-- 423 Query: 266 KLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMR 323 FD +LPE T+ ADG++ M +G++ Sbjct: 424 --FDFNLPER-----------------------FDITYVDADGREKRPYMVHRALLGSLE 458 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 ++ + G +W +AP ++ +I + V +++ L + G D Sbjct: 459 RFFGILIEHYGGAFPVW---LAPVQVVVIPV---SDVFAGYAQEVVRALREAGVRAEADL 512 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +++ ++ A P VIVG + V ++ R R ++L + + R Sbjct: 513 SADRMNAKIRKAQQEKIPYAVIVGQREQEGRTVSVRVRGGEQRNGVALGAFVEDVARRMR 572 Query: 444 NN 445 Sbjct: 573 ER 574 >gi|240280652|gb|EER44156.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H143] gi|325089093|gb|EGC42403.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 733 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 7/138 (5%) Query: 11 LQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +QE+ + E A + LR G + S G LP G K + + A++R E + Sbjct: 293 MQEHLKFLEEAEKRNHLRIGKDQDLFFFDEVSPGCPFLLPNGTKIFNALQALLRSEYRKR 352 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + +W +SG + Y +M +L D + P + +F +S Sbjct: 353 GYQEVQSPNMYDVGIWRQSGHWQHYKDDMFKL-DIEKRTWALKPMNCPGHAIMFGHRERS 411 Query: 125 YRNLPFTFYQIQLKFRDE 142 YR LP + R+E Sbjct: 412 YRELPLRIADFGVLHRNE 429 >gi|70998636|ref|XP_754040.1| glycyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|66851676|gb|EAL92002.1| glycyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|159126226|gb|EDP51342.1| glycyl-tRNA synthetase [Aspergillus fumigatus A1163] Length = 699 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 10/128 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++ ++IE + + +G++ +P ++AP K+ ++ + H R +++ Sbjct: 547 SFGIG--RILYSMIEHVYWAREEDEARGVLSFPPAIAPTKVLIVPLSTHASF-RPLLQQL 603 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L ++G DD IG ++A D LG P + V + V D+ ++ R T + Sbjct: 604 MTKLRRMGISNRVDDSSASIGKRYARNDELGTPFGITVDFQSVKDNTFTLRDRDTTKQVR 663 Query: 429 MSLEEVIN 436 S +E++ Sbjct: 664 ASEDEILQ 671 Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 +++PF I FR+E+ PR G++R REFLM + + + PEG K + Sbjct: 281 QSMPFASASIGKSFRNEISPRAGLLRVREFLMAEIEHY-VDPEGGKKHH 328 >gi|315186787|gb|EFU20545.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6578] Length = 578 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 81/416 (19%), Positives = 158/416 (37%), Gaps = 44/416 (10%) Query: 32 IHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +H+ + G+ W P G + + RE+ G + P + A LW SG Y Sbjct: 193 VHEEAGPGLIYWHPKGARIRLEIENFWREQHLARGYEVLYTPHIGKAWLWETSGHLSFYK 252 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + I+++ ++SYR LP + ++ +R E G+ Sbjct: 253 ENMYAPMEVDKSDYYIKPMNCPFHIMIYKTRLRSYRELPLRWAELGTVYRYERSGVLHGL 312 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R R F DA+ F TPE + + L ++ G + + P D S Sbjct: 313 LRVRGFTQDDAHIF-CTPEQIEDEILETLRFSLFMWKTFGFSDVKAYLSTRP---DKS-- 366 Query: 210 FIVLADTGETQVF-CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 GE + + + + + I E D++ + E A Y D+ K+ Sbjct: 367 ------VGEPERWEQATESLRKAIEREGLDYE-------VDEGGGAFYGPKIDI---KVR 410 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYG-IGAMRVV 325 D+L + S ++LP T+ ADG++ M +G++ Sbjct: 411 DALGREWQTST----------IQFDFNLPERFDITYVDADGREKRPYMVHRALLGSLERF 460 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 ++ + G +W +AP ++ +I + V +++ L + G D Sbjct: 461 FGILVEHYGGAFPVW---LAPVQVVVIPV---SDVFAGYAQEVVRALREAGVRAEADLSA 514 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 +++ ++ A P VIVG + V ++ R R ++L + + + R Sbjct: 515 DRMNAKIRKAQQEKIPYAVIVGQREQEGRTVSVRVRGGEQRNGVALGDFVEDVARR 570 >gi|330935397|ref|XP_003304947.1| hypothetical protein PTT_17681 [Pyrenophora teres f. teres 0-1] gi|311318137|gb|EFQ86884.1| hypothetical protein PTT_17681 [Pyrenophora teres f. teres 0-1] Length = 562 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 71/332 (21%), Positives = 123/332 (37%), Gaps = 67/332 (20%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E M F I+S+R+LP Q R E + +RSREFL ++ Sbjct: 147 EKPIAVRPTSETAMYPYFARKIQSHRDLPLKLNQWNNVVRWEFKHPMPFIRSREFLWQEG 206 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 ++ LT E + ++ Y ++ L ++P+ + G T+ Sbjct: 207 HTAHLTREEASAEVLQILDWYSDVYQN--LLAVPV------VKG--------------TK 244 Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDV---HNEKLFDSLPENKRV 277 K FP T + I Q AATS H K+F+ E+ Sbjct: 245 TVNEK----FPGADYTTTIEGFIPATGRGIQ-----AATSHCLGQHFSKMFNITVEDPTA 295 Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 G + H+ + + L + IG M I + D +G Sbjct: 296 KEAG-KSEHVHVWQNSWGLTTRS------------------IGVM------ILTHGDNRG 330 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM--------GEQIG 389 ++ P VA ++ +I + ++ +A E++Y ++ K+ D+ + G G Sbjct: 331 LVIPPRVAEIQVVVIPVGVTAKMSAEAKEELYGKVKKIADDLTEAGVRVETDYREGYSPG 390 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +F +L G PL++ G K V R Sbjct: 391 WKFNDWELKGIPLRIEFGPKDAEKGVVTTSRR 422 >gi|306828941|ref|ZP_07462133.1| serine--tRNA ligase [Streptococcus mitis ATCC 6249] gi|304429119|gb|EFM32207.1| serine--tRNA ligase [Streptococcus mitis ATCC 6249] Length = 424 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELKDTN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|259482954|tpe|CBF77921.1| TPA: glycyl-tRNA synthetase (AFU_orthologue; AFUA_5G05920) [Aspergillus nidulans FGSC A4] Length = 689 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 67/128 (52%), Gaps = 10/128 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++ +++E + + +G++ +P +AP K+ L+ + + + R +++ Sbjct: 537 SFGIG--RILYSLMEHVYYYREGDEARGVLSFPPVIAPTKVLLVPL-SSNPAFRPMVQEL 593 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L ++G DD IG ++A D LG P V V + V D+ + ++ R + + Sbjct: 594 TTKLRRLGVSSRVDDSSASIGKRYARNDELGTPFGVTVDFQSVKDNTITLRDRDSTKQVR 653 Query: 429 MSLEEVIN 436 S EE++ Sbjct: 654 ASQEEILQ 661 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171 +PF I FR+E+ PR G++R REFLM + F + PEG K Sbjct: 286 MPFASASIGKSFRNEISPRAGLLRVREFLMAEIEHF-VDPEGGK 328 >gi|307200699|gb|EFN80796.1| Threonyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator] Length = 691 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 90/417 (21%), Positives = 154/417 (36%), Gaps = 62/417 (14%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G + P G + + IR E + G E+ P + ++ LW SG + Y + Sbjct: 305 HELSPGSCFFQPRGAYIYNTLIDFIRSEYRKRGFQEVISPNIYNSKLWQVSGHWQHYAEN 364 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D + P + IF +S+R LP + R+E+ G+ R Sbjct: 365 MFSF-DVEKETYALKPMNCPGHCMIFDVRSRSWRELPLRLADFGVLHRNEMSGALTGLTR 423 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F S NK +S L L H + Sbjct: 424 VRRFQQDDAHIF-----CSVDQINKEILSALDF---------------------LRHVYS 457 Query: 212 VLADTGETQVFC-----SKDFMDFPIPSE-NTDFDDIISLNSIVEQWT------APYAAT 259 V G T C K D I ++ +D SLN+ E WT A Y Sbjct: 458 VF---GFTFDLCLSTRPEKFLGDIAIWNQAEKALED--SLNTFDEPWTLNPQDGAFYGPK 512 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D+ + D+L + + ++ F Y + K V + + Sbjct: 513 IDI---TIRDALKRAHQCATIQLDFQLPIRFNLSY-------VNESGEKVRPVIIHRAIL 562 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCD 378 G++ + A++ S+ GK WP ++P + ++ + + D+ +K++ V D Sbjct: 563 GSVERMIAILTESYAGK---WPFWLSPRQAMVVPVASQLDEYAYQVKQKLWDAGIMVEID 619 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 V D + + A L F ++VG K + V I+ R + +M +E++I Sbjct: 620 V---DPNDSFNKKIRNAQLAQFNFILVVGEKERNAGTVNIRTRDNVVHGEMGVEDLI 673 >gi|293364834|ref|ZP_06611551.1| serine--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307703083|ref|ZP_07640030.1| seryl-tRNA synthetase [Streptococcus oralis ATCC 35037] gi|291316284|gb|EFE56720.1| serine--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307623476|gb|EFO02466.1| seryl-tRNA synthetase [Streptococcus oralis ATCC 35037] Length = 424 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELKDTN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|255548247|ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus communis] gi|223545660|gb|EEF47164.1| prolyl-tRNA synthetase, putative [Ricinus communis] Length = 501 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 9/159 (5%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RGI+ G ++ F+ G+ V S+ + R + ++ D KG Sbjct: 236 TGRGIQGATSHCLGQNFAKMFEINFENEKGEKGMVWQNSWAY-STRTIGVMVMVHGDDKG 294 Query: 338 IIWPDSVAPFKISLINIKAHD---QVCRDACEKIYARLSKVGCDV---FWDDMGEQIGSQ 391 ++ P VA ++ +I + D Q DAC + L KVG F D+ G + Sbjct: 295 LVLPPKVASVQVIVIPVPYKDADTQGIFDACTETVDALCKVGIRAESDFRDNYSP--GWK 352 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 ++ ++ G PL++ +G K +++++V R ++D+S Sbjct: 353 YSHWEVKGVPLRIEIGPKDLANNQVRTVRRDNATKKDIS 391 >gi|114600744|ref|XP_001153847.1| PREDICTED: threonyl-tRNA synthetase isoform 7 [Pan troglodytes] Length = 715 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 84/416 (20%), Positives = 156/416 (37%), Gaps = 63/416 (15%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 334 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 393 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 394 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 452 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP--IGGDLS 207 R R F DA+ F + K + +LR + + S + + P GD Sbjct: 453 TRVRRFQQDDAHIFCAMEQIEDEI--KGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD-- 508 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 I + D E Q+ EN SLN E+W A Y D Sbjct: 509 ---IEVWDQAEKQL-------------EN-------SLNEFGEKWELNSGDGAFYGPKID 545 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGA 321 + ++ D++ + + ++ F Y P+ H +GS Sbjct: 546 I---QIKDAIGRYHQCATIQLDFQLPIRFNLTYKRPVIV---------HRAILGS----- 588 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL--SKVGCDV 379 + + A++ ++ GK WP ++P ++ ++ + C + +K+ + +K D+ Sbjct: 589 VERMIAILTENYGGK---WPFWLSPRQVMVVPVGP---TCDEYAQKVRQQFHDAKFMADI 642 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D G + + A L + ++VG K V I+ R + + ++ E I Sbjct: 643 DLDP-GCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETI 697 >gi|168000563|ref|XP_001752985.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695684|gb|EDQ82026.1| predicted protein [Physcomitrella patens subsp. patens] Length = 544 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/146 (21%), Positives = 68/146 (46%), Gaps = 4/146 (2%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RG++ G +S F+ + + V S+G+ R + ++ D KG Sbjct: 280 TGRGVQGATSHCLGQNFSKMFDILFEDENRERKNVWQNSWGL-TTRTIGVMVMIHGDNKG 338 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI--GSQFAVA 395 ++ P VAP ++ +I + + C K+ +L + G V DD+ + G +++ Sbjct: 339 LVLPPRVAPIQVVVIPVPFKGIDPSEECLKVTRQLQEAGFRVK-DDLRDNYSPGWKYSHW 397 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHR 421 +L G PL++ +G + + + +V + R Sbjct: 398 ELKGVPLRIEIGPRDIENKQVRVVRR 423 Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 40/81 (49%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM IF I+ +R+LP Q R E + +RSREFL ++ ++ T Sbjct: 168 PTSETVMYPIFAKWIRGHRDLPLRINQWCNVVRWEFKHPTPFIRSREFLWQEGHTAFATK 227 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 E + +++ Y R++ L Sbjct: 228 EEADVEVHQILELYRRVYEEL 248 >gi|331266974|ref|YP_004326604.1| seryl-tRNA synthetase [Streptococcus oralis Uo5] gi|326683646|emb|CBZ01264.1| seryl-tRNA synthetase [Streptococcus oralis Uo5] Length = 424 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELKDTN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|291404015|ref|XP_002718268.1| PREDICTED: threonyl-tRNA synthetase-like 2-like [Oryctolagus cuniculus] Length = 709 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H S G +LP G + +IREE ++ +E+ P + ++ LW SG + Y + Sbjct: 321 FHDVSPGSCFFLPRGAFVYSTLMDLIREEYHKRDFLEVLSPNVYNSKLWETSGHWQHYSE 380 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + P + +F +S+R +P F + R+EL G+ Sbjct: 381 NMFTFRVEKE-TFALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLSGLT 439 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 440 RVRRFQQDDAHIF 452 >gi|76798465|ref|ZP_00780702.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|76799387|ref|ZP_00781541.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|76585255|gb|EAO61859.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|76586166|gb|EAO62687.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21] Length = 381 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IYS++ LD E + G E+ P + Sbjct: 110 RGAKVTGSRFLFYKGLGARLERAIYSFM------LD--------EHAKEGYTEVIPPYMV 155 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD + PT E +T+ +R I + LP F + Sbjct: 156 NHDSMFGTGQYPKFKEDTFELAD---SPFVLIPTAEVPLTNYYRDEIIDGKELPIYFTAM 212 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 213 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQELEKMTANAENILQKLNL- 270 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 271 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 301 >gi|258573385|ref|XP_002540874.1| prolyl-tRNA synthetase [Uncinocarpus reesii 1704] gi|237901140|gb|EEP75541.1| prolyl-tRNA synthetase [Uncinocarpus reesii 1704] Length = 586 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 5/143 (3%) Query: 51 DNVNAIIREEQNRTGAIEMSVPTLQSAD-LWVESGRYDSYGKEMLRLA----DRNDKAMI 105 + + A ++ + G S P S D L E + + E+ + ++ +K + Sbjct: 90 EEIQAWFNDKIKKMGVKNCSFPLFVSEDVLKKEKDHIEGFAAEVAWVTHAGNNQLEKKIA 149 Query: 106 YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDL 165 PT E VM + I+S+R+LP Q R E + +R+REFL ++ ++ L Sbjct: 150 IRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNPQPFLRTREFLWQEGHTAHL 209 Query: 166 TPEGSKHSYNKMFVSYLRIFHRL 188 T ++ ++ Y ++ +L Sbjct: 210 TEAAAREEVLQILQHYAHVYEQL 232 >gi|159036441|ref|YP_001535694.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205] gi|157915276|gb|ABV96703.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205] Length = 405 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 12/133 (9%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G A V IRE + + G + P L +L+ SG D + +M + Sbjct: 23 GLPLWLPAGAAARHAVEEYIRELERQAGHQHVLTPPLGKRELFELSGHLDFFADDMFPPM 82 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM---- 150 RL+ D + P ++RS +S R+LP ++ +R E R GV+ Sbjct: 83 RLS--ADDEFVLRPALCPHHALVYRSRGRSRRDLPLRIAELGGMYRAE---RSGVLGGLA 137 Query: 151 RSREFLMKDAYSF 163 R R + DA++F Sbjct: 138 RVRAISLNDAHNF 150 >gi|323699396|ref|ZP_08111308.1| histidyl-tRNA synthetase [Desulfovibrio sp. ND132] gi|323459328|gb|EGB15193.1| histidyl-tRNA synthetase [Desulfovibrio desulfuricans ND132] Length = 413 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 14/171 (8%) Query: 34 QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDS--YGK 91 Q KG P + A RE +R G E+ P L+ +L+ +S D+ GK Sbjct: 5 QKIKGFADLFPEEAAKYTFMEACAREIFSRYGFGELRTPILEKTELFQKSIGEDTDVVGK 64 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT---FYQIQLKFRDELRPRFG 148 EM DR D+++ P E + R+ I+S P F+ FR E RP+ G Sbjct: 65 EMFTFPDRKDRSLTMRP---EATAGVVRAFIESKTYQPGNISKFFTFGPMFRYE-RPQKG 120 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 R R+F +A F + M ++LR R+GL+ + + S Sbjct: 121 --RQRQFHQINAECFGADEPQADAELILMLTAFLR---RIGLRDLTVELNS 166 >gi|154278048|ref|XP_001539849.1| threonyl-tRNA synthetase [Ajellomyces capsulatus NAm1] gi|150413434|gb|EDN08817.1| threonyl-tRNA synthetase [Ajellomyces capsulatus NAm1] Length = 733 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 7/138 (5%) Query: 11 LQENPRDAEIASHKLMLRTG------MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +QE+ + E A + LR G + S G LP G K + + A++R E + Sbjct: 293 MQEHLKFLEEAEKRNHLRIGKDQDLFFFDEVSPGCPFLLPNGTKIFNALQALLRSEYRKR 352 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + +W +SG + Y +M +L D + P + +F +S Sbjct: 353 GYQEVQSPNMYDVGIWRQSGHWQHYKDDMFKL-DIEKRTWALKPMNCPGHAIMFGHRERS 411 Query: 125 YRNLPFTFYQIQLKFRDE 142 YR LP + R+E Sbjct: 412 YRELPLRIADFGVLHRNE 429 >gi|220917084|ref|YP_002492388.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|254783505|sp|B8J823|SYT_ANAD2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219954938|gb|ACL65322.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 650 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 18/145 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ + G WLP G + + +R + G E+ P L + LW SG + Y + Sbjct: 262 HEFAPGAPFWLPAGTVLYNVLEDAMRRLVLKNGYQEVKTPLLFNKRLWETSGHWGKYREN 321 Query: 93 MLRLAD-RNDKAM------------IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 M + D +D A+ + P+H I+R +SYR LP ++ Sbjct: 322 MFLVVDSESDPALPLEDRCSFSLKPMNCPSHHL----IYRMDKRSYRELPVRYFTTDALH 377 Query: 140 RDELRPRF-GVMRSREFLMKDAYSF 163 R+E G+ R R+F DA+ + Sbjct: 378 RNEASGSLGGLTRVRQFEQDDAHIY 402 >gi|197122302|ref|YP_002134253.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. K] gi|238689843|sp|B4UAM8|SYT_ANASK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|196172151|gb|ACG73124.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. K] Length = 650 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 18/145 (12%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ + G WLP G + + +R + G E+ P L + LW SG + Y + Sbjct: 262 HEFAPGAPFWLPAGTVLYNVLEDAMRRLVLKNGYQEVKTPLLFNKRLWETSGHWGKYREN 321 Query: 93 MLRLAD-RNDKAM------------IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 M + D +D A+ + P+H I+R +SYR LP ++ Sbjct: 322 MFLVVDSESDPALPLEDRCSFSLKPMNCPSHHL----IYRMDKRSYRELPVRYFTTDALH 377 Query: 140 RDELRPRF-GVMRSREFLMKDAYSF 163 R+E G+ R R+F DA+ + Sbjct: 378 RNEASGSLGGLTRVRQFEQDDAHIY 402 >gi|168485545|ref|ZP_02710053.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] gi|183571170|gb|EDT91698.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] Length = 424 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 315 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 316 YRVVALSTGDMG 327 >gi|225574947|ref|ZP_03783557.1| hypothetical protein RUMHYD_03026 [Blautia hydrogenotrophica DSM 10507] gi|225037794|gb|EEG48040.1| hypothetical protein RUMHYD_03026 [Blautia hydrogenotrophica DSM 10507] Length = 667 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 4/129 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIRE-EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 +G+ +P G L + I + E N G I P + +DL+ SG +D Y M Sbjct: 275 QGLPLLMPKGVIILKELQRWIEDLEDNEWGYIRTKTPLMAKSDLYKISGHWDHYKDGMFV 334 Query: 96 LADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 L D +Y P ++++ SYR LP + + FR+E G+ R Sbjct: 335 LGDEEKDKEVYALRPMTCPFQYYVYKASQHSYRELPLRYSETSTLFRNEDSGEMHGLTRV 394 Query: 153 REFLMKDAY 161 R+F + +A+ Sbjct: 395 RQFTITEAH 403 >gi|149003505|ref|ZP_01828379.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|168494543|ref|ZP_02718686.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|237650372|ref|ZP_04524624.1| seryl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974] gi|237822060|ref|ZP_04597905.1| seryl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2] gi|147758441|gb|EDK65440.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|183575522|gb|EDT96050.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] Length = 424 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 315 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 316 YRVVALSTGDMG 327 >gi|114600756|ref|XP_001153674.1| PREDICTED: threonyl-tRNA synthetase isoform 5 [Pan troglodytes] Length = 641 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 334 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 393 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 394 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 452 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 453 TRVRRFQQDDAHIF 466 >gi|322391441|ref|ZP_08064910.1| serine--tRNA ligase [Streptococcus peroris ATCC 700780] gi|321145524|gb|EFX40916.1| serine--tRNA ligase [Streptococcus peroris ATCC 700780] Length = 424 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGAKLERAIYNFM------LD--------EHAKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYDELEKMVGNAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|14601532|ref|NP_148072.1| glycyl-tRNA synthetase [Aeropyrum pernix K1] gi|11387160|sp|Q9YBF8|SYG_AERPE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|5105327|dbj|BAA80640.1| glycyl-tRNA synthetase [Aeropyrum pernix K1] Length = 583 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 1/99 (1%) Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 + +P +AP + ++ + +D+ + +Y L + G V++DD G IG ++A AD Sbjct: 465 LAFPRDIAPVQAVVLPLVENDEKLVERARMVYETLVEAGFTVYYDDSG-SIGRRYARADE 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +G P V + + + D V ++ R T + + +EV++ Sbjct: 524 IGVPAAVTIDYQTLEDGTVTLRDRDTWRQVRIGADEVVD 562 >gi|319939766|ref|ZP_08014123.1| seryl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] gi|319811104|gb|EFW07415.1| seryl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] Length = 425 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHQKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ ++D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFEVSDTN---YVLIPTAEVPLTNYYRGEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEHSYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|149012162|ref|ZP_01833271.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|303255391|ref|ZP_07341457.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|303259488|ref|ZP_07345465.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|303262351|ref|ZP_07348294.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|303264769|ref|ZP_07350686.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|303266608|ref|ZP_07352493.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|303268841|ref|ZP_07354628.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|147763764|gb|EDK70698.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|301801323|emb|CBW34006.1| seryl-tRNA synthetase [Streptococcus pneumoniae INV200] gi|302597636|gb|EFL64716.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|302636450|gb|EFL66942.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|302639422|gb|EFL69880.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|302641622|gb|EFL71982.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|302643852|gb|EFL74114.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|302645636|gb|EFL75866.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS397] Length = 424 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 315 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 316 YRVVALSTGDMG 327 >gi|56789234|gb|AAH88355.1| TARS protein [Homo sapiens] Length = 682 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + IR E + G E+ P + ++ LW+ SG + Y Sbjct: 334 FFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYS 393 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R LP + R+EL G+ Sbjct: 394 ENMFSF-EVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGL 452 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 453 TRVRRFQQDDAHIF 466 >gi|254692867|ref|NP_001157089.1| threonyl-tRNA synthetase, mitochondrial isoform 2 [Mus musculus] gi|14290460|gb|AAH08995.1| Tars2 protein [Mus musculus] Length = 697 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 56/150 (37%), Gaps = 17/150 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + + A IR E R G E+ PTL S LW +SG ++ Y Sbjct: 318 FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTLFSTKLWEQSGHWEHYR 377 Query: 91 KEMLRL----------------ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 +M L A + P + +F +S+R LP Sbjct: 378 ADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFAHRPRSWRELPVRLAD 437 Query: 135 IQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 R E G+ R F DA+ F Sbjct: 438 FGALHRAEASGSLGGLTRLWRFQQDDAHIF 467 >gi|24380240|ref|NP_722195.1| seryl-tRNA synthetase [Streptococcus mutans UA159] gi|30173154|sp|Q8DSB7|SYS_STRMU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|24378250|gb|AAN59501.1|AE015015_1 putative seryl-tRNA synthetase [Streptococcus mutans UA159] Length = 426 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R +++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGSKVTGSRFLFYKGLGARLERAIYNFM------LD--------EHAKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD ND +I PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELAD-NDYVLI--PTAEVPLTNYYRGEIIDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S + KM + I +L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEDSYNELEKMTANAENILQKL--- 312 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 +L + I L TG+ +K + ++ IP++NT Sbjct: 313 -------------ELPYRVITLC-TGDMGFSAAKTYDLEVWIPAQNT 345 >gi|322412582|gb|EFY03490.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 425 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 26/184 (14%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G E+ P + + D +G+Y + ++ L+D N + PT E +T+ + Sbjct: 183 DEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYY 239 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I + LP F + FR E R G++R +F + F PE S Sbjct: 240 RGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEKSYQEL 298 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIP 233 KM + I +LGL P R ++ TG+ +K + ++ IP Sbjct: 299 EKMTANAENILQKLGL---PYR--------------VIALCTGDMGFSAAKTYDLEVWIP 341 Query: 234 SENT 237 ++NT Sbjct: 342 AQNT 345 >gi|168482647|ref|ZP_02707599.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|172043721|gb|EDT51767.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|332077694|gb|EGI88155.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA41301] gi|332203581|gb|EGJ17648.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA47368] Length = 424 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 315 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 316 YRVVALSTGDMG 327 >gi|290579784|ref|YP_003484176.1| putative seryl-tRNA synthetase [Streptococcus mutans NN2025] gi|254996683|dbj|BAH87284.1| putative seryl-tRNA synthetase [Streptococcus mutans NN2025] Length = 426 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R +++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGSKVTGSRFLFYKGLGARLERAIYNFM------LD--------EHAKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD ND +I PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELAD-NDYVLI--PTAEVPLTNYYRGEIIDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S + KM + I +L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEDSYNELEKMTANAENILQKL--- 312 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 +L + I L TG+ +K + ++ IP++NT Sbjct: 313 -------------ELPYRVITLC-TGDMGFSAAKTYDLEVWIPAQNT 345 >gi|169832533|ref|YP_001693918.1| seryl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|238688320|sp|B1I9K5|SYS_STRPI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|168995035|gb|ACA35647.1| seryl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] Length = 424 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 315 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 316 YRVVALSTGDMG 327 >gi|118095671|ref|XP_413774.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 903 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 85/430 (19%), Positives = 171/430 (39%), Gaps = 61/430 (14%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G +LP G + + IREE +R E+ P + ++ LW SG + Y Sbjct: 514 FFHDLSPGSCFFLPRGAFLYNTLTDFIREEYHRRNFTEVVSPNIFNSKLWETSGHWQHYS 573 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + +F +S+R +P + R+EL G+ Sbjct: 574 ENMFSF-EIEKETFALKPMNCPGHCLMFAHRPRSWREMPLRLADFGVLHRNELSGTLSGL 632 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--GDLS 207 R R F DA+ + T E + K + +L+ + + + + + P G+L Sbjct: 633 TRVRRFQQDDAHIY-CTIEQIEEEI-KGCLDFLKSVYSIFGFTFQLHLSTRPENYLGELE 690 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT------APYAATSD 261 + D E Q+ +N SL++ QWT A Y D Sbjct: 691 -----IWDHAEKQL-------------QN-------SLDNFGVQWTLNPGDGAFYGPKID 725 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY--VQMGSYGI 319 + K+ D+L + + ++ F +++L T+ G DG D V + + Sbjct: 726 I---KIKDALGRYHQCATIQLD----FQLPIRFNL----TYVGKDGDDKKRPVIIHRAVL 774 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCD 378 G++ + A++ ++ GK WP ++P ++ ++ + ++ + C + + D Sbjct: 775 GSVERMIAILAENYGGK---WPFWLSPRQVMVVPVGPTSEEYAQQVCSEFFEAGFMSDVD 831 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS----LEEV 434 + D + + A L + ++VG K ++ V ++ R + ++S +E++ Sbjct: 832 L---DQSCTLNKKIRNAQLAQYNFILVVGEKEKANHAVNVRTRDNKVHGEISVSSAIEKL 888 Query: 435 INYASHRFSN 444 + S R N Sbjct: 889 KKFKSLRLPN 898 >gi|317036964|ref|XP_001398427.2| glycyl-tRNA synthetase 1 [Aspergillus niger CBS 513.88] Length = 738 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 10/113 (8%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++ ++IE + + +G++ +P ++AP K+ ++ + H Q +++ Sbjct: 586 SFGIG--RILYSMIEQVYWSREGDEARGVLSFPPAIAPTKVLIVPLSTH-QSFAPLVQRL 642 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +L ++G DD IG ++A D LG P V V + V D+ ++ R Sbjct: 643 TTKLRRMGVSNRVDDSSASIGKRYARNDELGTPFGVTVDFQSVKDNTFTLRDR 695 Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171 +++PF I FR+E+ PR G++R REFLM + F + P+G K Sbjct: 320 QSMPFASASIGKSFRNEISPRAGLLRVREFLMAEIEHF-VDPQGGK 364 >gi|119472992|ref|ZP_01614827.1| threonyl-tRNA synthetase [Alteromonadales bacterium TW-7] gi|119444612|gb|EAW25923.1| threonyl-tRNA synthetase [Alteromonadales bacterium TW-7] Length = 586 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W G + +RE+ E+ P + LW +SG ++ Y Sbjct: 257 QEEAPGMVFWHNDGWSIYRELEEFVREKLREYSYEEVKGPMMMDRSLWEKSGHWEKYSDA 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + I P + IF +KSYR+LP + R+E G+MR Sbjct: 317 MFTTESEKREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALHGLMR 375 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 376 VRGFTQDDAHVF 387 >gi|154245583|ref|YP_001416541.1| threonyl-tRNA synthetase [Xanthobacter autotrophicus Py2] gi|154159668|gb|ABS66884.1| threonyl-tRNA synthetase [Xanthobacter autotrophicus Py2] Length = 660 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 7/137 (5%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + G W P G + A +R + + E++ P + A LW SG + Y + Sbjct: 257 QEEGPGTVFWHPKGWTLFQELVAYMRR-RLKADYNEVNAPQVLDAGLWETSGHWGWYKEN 315 Query: 93 MLRLAD-----RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 M ++ ++++ P + IF+ +KSYR+LP + R E Sbjct: 316 MFKVQSAGDETKDERVFALKPMNCPGHVQIFKHGLKSYRDLPLRLAEFGAVHRYEPSGAL 375 Query: 148 -GVMRSREFLMKDAYSF 163 G+MR R F DA+ F Sbjct: 376 HGLMRVRGFTQDDAHVF 392 >gi|323669590|ref|NP_001191177.1| bifunctional aminoacyl-tRNA synthetase [Danio rerio] Length = 1511 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 70/337 (20%), Positives = 118/337 (35%), Gaps = 71/337 (21%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + ++S+R+LP Q R E + +R+REFL ++ ++ T Sbjct: 1119 PTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHTAFATK 1178 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E + ++ Y R++ L +IP +V E + F D+ Sbjct: 1179 EEATEEVLQILDLYARVYEE--LMAIP----------------VVKGRKTEKEKFAGGDY 1220 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 T + IS S R I+ Sbjct: 1221 --------TTTVEAFIS--------------------------------ASGRAIQGATS 1240 Query: 288 FYFGTKYSLPMSATFKGAD--GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 + G +S F+ G+ S+GI R + + D G++ P VA Sbjct: 1241 HHLGQNFSRMFEIVFEDPKKPGEKQLAYQNSWGI-TTRTIGVLTMVHGDNMGLVLPPRVA 1299 Query: 346 PFKISLINI-------KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 ++ +I +A + D C K +RL K V D G +F +L Sbjct: 1300 CLQVIIIPCGITATLPEAEKDLLLDQCSKYLSRLQKADIRVKADLRDNYSPGWKFNHWEL 1359 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P++ VG K + + R TG E ++++E Sbjct: 1360 KGVPIRFEVGPKDLKQGQFVAVRRDTG--EKITVKEA 1394 >gi|212535538|ref|XP_002147925.1| prolyl-tRNA synthetase [Penicillium marneffei ATCC 18224] gi|210070324|gb|EEA24414.1| prolyl-tRNA synthetase [Penicillium marneffei ATCC 18224] Length = 594 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 40/81 (49%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + I+S+R+LP Q R E + +R+REFL ++ ++ LT Sbjct: 186 PTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTAHLTE 245 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 EG+ ++ Y ++ L Sbjct: 246 EGAAEEVMQILDHYAHVYEDL 266 >gi|332290253|ref|YP_004421105.1| threonyl-tRNA synthetase [Gallibacterium anatis UMN179] gi|330433149|gb|AEC18208.1| threonyl-tRNA synthetase [Gallibacterium anatis UMN179] Length = 643 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +YG Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRAKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTSSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 375 RVRGFTQDDAHIF 387 >gi|325120098|emb|CBZ55652.1| putative prolyl-tRNA synthetase [Neospora caninum Liverpool] Length = 656 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 5/162 (3%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RGI+ GT ++ F+ +G V S+G R + +I + D KG Sbjct: 376 NGRGIQAATSHLLGTNFAKMFEIEFEDEEGHKRLVHQTSWGC-TTRSLGVMIMTHGDDKG 434 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRD---ACEKIYARLSKVGCDVFWDDMGEQI-GSQFA 393 I+ P VA ++ +I I D+ + C ++ A L K V DD G ++ Sbjct: 435 IVLPPRVASVQVIIIPILFKDENTAEIVAKCRELKALLEKADIRVRIDDRPNYTPGWKYN 494 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 ++ G PL++ +G K ++ + R T + +E++ Sbjct: 495 HWEVKGVPLRLELGPKDLAKGSARVVRRDTNEAYQVQWDELV 536 >gi|323127929|gb|ADX25226.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 425 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 26/184 (14%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G E+ P + + D +G+Y + ++ L+D N + PT E +T+ + Sbjct: 183 DEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYY 239 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I + LP F + FR E R G++R +F + F PE S Sbjct: 240 RGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEKSYQEL 298 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIP 233 KM + I +LGL P R ++ TG+ +K + ++ IP Sbjct: 299 EKMTANAENILQKLGL---PYR--------------VIALCTGDMGFSAAKTYDLEVWIP 341 Query: 234 SENT 237 ++NT Sbjct: 342 AQNT 345 >gi|308272327|emb|CBX28933.1| Threonyl-tRNA synthetase [uncultured Desulfobacterium sp.] Length = 637 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 5/160 (3%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H + G+ + P G + + + + E G +E P + + LW SG +++Y + Sbjct: 252 HDEAPGMPFFHPKGMSVWEALISYWKIEHRAAGYVETKTPIMLNRSLWERSGHWENYREN 311 Query: 93 M-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + D + A+ P + +F SY++LP +I L R EL G+ Sbjct: 312 MYTSVVDETEYAI--KPMNCPGGMLLFGMKPHSYKDLPLRSAEIGLVHRHELSGVLSGLF 369 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 R R F DA+ F +TPE + + RI+ GL Sbjct: 370 RVRAFHQDDAHIF-MTPEQIESEILGVLKLVERIYSTFGL 408 >gi|281211698|gb|EFA85860.1| threonyl-tRNA synthetase [Polysphondylium pallidum PN500] Length = 730 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 8/135 (5%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H +S G +LP G + + +++ +R E + G E+ P + S LW SG + +Y Sbjct: 345 HPYSPGSCFFLPHGTRIYNKLHSFLRSEYRKRGFEEVITPNIYSQKLWETSGHWQNYKDN 404 Query: 93 MLRL-ADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 M D ++ + P H + +SH SY++LP + R+E G Sbjct: 405 MFGFQCDHTSYSLKPMNCPGH--CLMFAHKSH--SYKDLPMRIADFGVLHRNETHGSLTG 460 Query: 149 VMRSREFLMKDAYSF 163 + R R F DA+ F Sbjct: 461 LTRVRRFQQDDAHIF 475 >gi|194397764|ref|YP_002037092.1| seryl-tRNA synthetase [Streptococcus pneumoniae G54] gi|238690854|sp|B5E7F2|SYS_STRP4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|194357431|gb|ACF55879.1| seryl-tRNA synthetase [Streptococcus pneumoniae G54] Length = 424 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 315 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 316 YRVVALSTGDMG 327 >gi|15900330|ref|NP_344934.1| seryl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|111657630|ref|ZP_01408364.1| hypothetical protein SpneT_02001184 [Streptococcus pneumoniae TIGR4] gi|148996814|ref|ZP_01824532.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|149023698|ref|ZP_01836178.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|168576870|ref|ZP_02722720.1| seryl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|225860434|ref|YP_002741943.1| seryl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298229691|ref|ZP_06963372.1| seryl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254625|ref|ZP_06978211.1| seryl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502204|ref|YP_003724144.1| seryl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A] gi|307067059|ref|YP_003876025.1| seryl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|30173203|sp|Q97SG0|SYS_STRPN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783497|sp|C1CPS1|SYS_STRZT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|14971880|gb|AAK74574.1| seryl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|147757389|gb|EDK64428.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|147929635|gb|EDK80627.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|183577467|gb|EDT97995.1| seryl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|225728141|gb|ACO23992.1| seryl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298237799|gb|ADI68930.1| seryl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A] gi|306408596|gb|ADM84023.1| Seryl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|327390820|gb|EGE89160.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA04375] gi|332202320|gb|EGJ16389.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA41317] Length = 424 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 315 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 316 YRVVALSTGDMG 327 >gi|66809557|ref|XP_638501.1| glycyl-tRNA synthetase [Dictyostelium discoideum AX4] gi|60467108|gb|EAL65146.1| glycyl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 678 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 10/115 (8%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+G+G R++ +++E ++ + +G++ P +AP K S++ + + D++ + I Sbjct: 527 SFGLG--RIIYSILEQNYYTRENDEQRGVLSLPAIIAPVKASILPLTSSDRIA-PFVQTI 583 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 L + DD G IG ++A D +G P V + + V D+ V ++ R T Sbjct: 584 SKALKEANISTKVDDTGNAIGRKYARTDEIGVPFGVTIDFQTVEDNTVTLRERDT 638 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 112 EVMTDIFRSHIKSY----RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 E IF + K Y + LPF QI FR+E+ PR G++R REF M + F + P Sbjct: 246 ETAQGIFTNFGKLYEYNGKKLPFAAAQIGNAFRNEIAPRAGLLRVREFTMAEIEHF-VNP 304 Query: 168 EGSKH 172 H Sbjct: 305 NNKTH 309 >gi|221109010|ref|XP_002168836.1| PREDICTED: hypothetical protein, partial [Hydra magnipapillata] Length = 384 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 3/126 (2%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR- 95 +G+ WLP G D + +++ Q + G ++ P + +L+V SG Y YG + + Sbjct: 259 QGLPLWLPKGAALRDRLEQFLKKAQKKAGYEQVVTPHIGQKELYVTSGHYAKYGADSFQP 318 Query: 96 -LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 + + P + +I+ S SY++LP + + +R E G+ R R Sbjct: 319 ITTPAEGEEFLLKPMNCPHHCEIYNSRPWSYKDLPKRYAEFGTVYRYEQSGELHGLTRVR 378 Query: 154 EFLMKD 159 F D Sbjct: 379 GFTQDD 384 >gi|320586315|gb|EFW98994.1| threonyl-tRNA synthetase [Grosmannia clavigera kw1407] Length = 524 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 20/149 (13%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 +S G +LP G + + + +R++ R G E+ PT+ LW +SG ++Y +M Sbjct: 92 YSPGSPIFLPNGARVFNRLVDFLRKQYVRYGFQEVITPTIYKKALWAKSGHLENYADDMF 151 Query: 95 RLAD--------RNDKAMIYGPTHEE-----------VMTDIFRSHIKSYRNLPFTFYQI 135 + R + GP E IF + SYR+LP + Sbjct: 152 TVTSASLATGERRGEGGATPGPQDLEDEYGLKPMNCPGHCLIFAAQRHSYRDLPIRYADF 211 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSF 163 RDEL G+ R R F D + F Sbjct: 212 SPLHRDELSGALSGLTRVRRFHQDDGHVF 240 >gi|158299584|ref|XP_319682.4| AGAP008929-PA [Anopheles gambiae str. PEST] gi|157013587|gb|EAA14818.5| AGAP008929-PA [Anopheles gambiae str. PEST] Length = 761 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H+ S G + P G + + IR E + G E+ P + +A LW SG + Y + Sbjct: 375 FHELSPGSCFFQPKGAHIYNTLMGFIRSEYRKRGFQEVISPNIYNAKLWQTSGHWQHYAE 434 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +S+R LP + R+EL G+ Sbjct: 435 NMFSF-ESEKETFALKPMNCPGHCLMFDHRNRSWRELPLRMADFGVLHRNELSGALTGLT 493 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 494 RVRRFQQDDAHIF 506 >gi|301793653|emb|CBW36038.1| seryl-tRNA synthetase [Streptococcus pneumoniae INV104] Length = 424 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 315 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 316 YRVVALSTGDMG 327 >gi|168490677|ref|ZP_02714820.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|183575046|gb|EDT95574.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] Length = 424 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 315 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 316 YRVVALSTGDMG 327 >gi|116516325|ref|YP_815885.1| seryl-tRNA synthetase [Streptococcus pneumoniae D39] gi|148983808|ref|ZP_01817127.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|161410754|ref|NP_357966.2| seryl-tRNA synthetase [Streptococcus pneumoniae R6] gi|30173153|sp|Q8DR22|SYS_STRR6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|122279229|sp|Q04M63|SYS_STRP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116076901|gb|ABJ54621.1| seryl-tRNA synthetase [Streptococcus pneumoniae D39] gi|147923955|gb|EDK75067.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|301799511|emb|CBW32058.1| seryl-tRNA synthetase [Streptococcus pneumoniae OXC141] Length = 424 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 315 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 316 YRVVALSTGDMG 327 >gi|225853986|ref|YP_002735498.1| seryl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|254783495|sp|C1CCH7|SYS_STRZJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|225723288|gb|ACO19141.1| seryl-tRNA synthetase [Streptococcus pneumoniae JJA] Length = 424 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 315 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 316 YRVVALSTGDMG 327 >gi|148988163|ref|ZP_01819626.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|148993951|ref|ZP_01823321.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|168488101|ref|ZP_02712300.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|147926627|gb|EDK77700.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|147927540|gb|EDK78567.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|183573172|gb|EDT93700.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|332075256|gb|EGI85726.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA17570] Length = 424 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 315 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 316 YRVVALSTGDMG 327 >gi|317136752|ref|XP_001727256.2| prolyl-tRNA synthetase YHR020W [Aspergillus oryzae RIB40] Length = 603 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (48%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 188 EKKIAIRPTSETVMYPYYSKWIRSHRDLPLKLNQWNSVVRWEFKNPQPFLRTREFLWQEG 247 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ LT +G+ + Y +I+ L Sbjct: 248 HTAHLTKDGAHDEVMHILDLYAQIYEEL 275 >gi|332993607|gb|AEF03662.1| threonyl-tRNA synthetase [Alteromonas sp. SN2] Length = 638 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 + + G+ W G + +RE+ E+ P + LW +SG ++ Y + Sbjct: 257 QEEAPGMVFWHNDGWSIYTELEKFVREKLRDYTYDEVKGPLMMDRSLWEKSGHWEKYAEN 316 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + I P + IF +KSYR+LP + R+E G+MR Sbjct: 317 MFTTESEKREYAI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALHGLMR 375 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 376 VRGFTQDDAHIF 387 >gi|39939231|ref|NP_950997.1| threonyl-tRNA synthetase [Onion yellows phytoplasma OY-M] gi|39722340|dbj|BAD04830.1| threonyl-tRNA synthetase [Onion yellows phytoplasma OY-M] Length = 308 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 72/323 (22%), Positives = 132/323 (40%), Gaps = 33/323 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G V I +++ + P + + +L+ SG D Y M + Sbjct: 9 GLPFWLPKGATVRRIVERYIVDKELSYDYHHVYTPIMANTELYRISGHLDHYASNMFPIM 68 Query: 98 D-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 N + ++ P + I++ SY+ LP ++ + R E G+ R RE Sbjct: 69 TLENGEKLVLRPMNCPHHMMIYKKTPHSYKELPLRIAELGMMHRFEKSGAVSGLQRVREM 128 Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 + DA+ F P+ K K+ L ++ +K+ +R LS+ D Sbjct: 129 TLNDAHIFA-CPDQIKEEMKKIINLILEVYRDFNIKNYELR---------LSYR-----D 173 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 +T+ + + D M +E T + I L+ ++ A + ++F +L + Sbjct: 174 PNDTEKYFNDDQMWH--HAEKTLKETIQELSLPFKEAIGEAAFYGPKLDVQVFTALGNEE 231 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAM-RVVAAVIESSH 333 +S ++ F K+ L TF G D K H V + + M R +A ++E + Sbjct: 232 TLSTVQLD----FLLPQKFDL----TFIGEDNKHHRPVVIHRAVVSTMERFLAHLVEET- 282 Query: 334 DGKGIIWPDSVAPFKISLINIKA 356 KG ++P AP ++ LI + A Sbjct: 283 --KG-VFPLWFAPVQVLLIPVSA 302 >gi|238488527|ref|XP_002375501.1| prolyl-tRNA synthetase [Aspergillus flavus NRRL3357] gi|220697889|gb|EED54229.1| prolyl-tRNA synthetase [Aspergillus flavus NRRL3357] Length = 603 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (48%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 188 EKKIAIRPTSETVMYPYYSKWIRSHRDLPLKLNQWNSVVRWEFKNPQPFLRTREFLWQEG 247 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ LT +G+ + Y +I+ L Sbjct: 248 HTAHLTKDGAHDEVMHILDLYAQIYEEL 275 >gi|62078771|ref|NP_001014042.1| probable threonyl-tRNA synthetase 2, cytoplasmic [Rattus norvegicus] gi|54035500|gb|AAH83878.1| Threonyl-tRNA synthetase-like 2 [Rattus norvegicus] Length = 553 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y Sbjct: 402 FHDLSPGSCFFLPRGAFIYNTLMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSN 461 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M D P + +F +S+R +P F + R+EL G+ Sbjct: 462 NMFTFDIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLTGLT 520 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 521 RVRRFQQDDAHIF 533 >gi|145608852|ref|XP_369806.2| hypothetical protein MGG_06321 [Magnaporthe oryzae 70-15] gi|145016282|gb|EDK00772.1| hypothetical protein MGG_06321 [Magnaporthe oryzae 70-15] Length = 665 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 13/141 (9%) Query: 316 SYGIGAMRVVAAVIESSH---------DGKGII-WPDSVAPFKISLINIKAHDQVCRDAC 365 S+GIG R++ ++E ++ + +G++ + VAP K+ ++ + HD Sbjct: 506 SFGIG--RILYCLLEHNYWTRASDGGDEARGVLSFTPVVAPTKVLIVPLSRHDDFV-PFV 562 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +KI +L VG DD IG +++ D LG PL + V + V D + ++ R T + Sbjct: 563 QKISQKLRSVGVSSRVDDSSATIGRRYSRNDELGTPLGITVDFQTVKDGTITLRDRDTTV 622 Query: 426 REDMSLEEVINYASHRFSNNR 446 + ++++ S N+ Sbjct: 623 QVRADQDKIVEAIQELVSGNK 643 Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 26/47 (55%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 + +PF I +R+E+ PR G++R REFLM + F G KH Sbjct: 240 QQMPFASASIGKSYRNEISPRSGLLRVREFLMAEIEHFVDPESGKKH 286 >gi|254441196|ref|ZP_05054689.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 307] gi|198251274|gb|EDY75589.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 307] Length = 649 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 6/138 (4%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G W P G + +R +Q G +E++ P + LW +SG ++ + + Sbjct: 261 MQEEASGQIFWHPNGWLIFTQLQDYMRRKQRAGGYVEVNTPQVVDRKLWEQSGHWEKFQE 320 Query: 92 EMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 M + R P + I+ +KSYR+LP + R E Sbjct: 321 HMFIVEVDEEHAREKAVNALKPMNCPCHVQIYNQGLKSYRDLPVRMAEFGSCNRYEPSGA 380 Query: 147 F-GVMRSREFLMKDAYSF 163 G+MR R F D + F Sbjct: 381 LHGIMRVRGFTQDDGHIF 398 >gi|224373363|ref|YP_002607735.1| threonyl-tRNA synthetase [Nautilia profundicola AmH] gi|254783530|sp|B9L5U7|SYT_NAUPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|223589770|gb|ACM93506.1| threonyl-tRNA synthetase [Nautilia profundicola AmH] Length = 611 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 70/178 (39%), Gaps = 12/178 (6%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G N+ ++ R + + P L + +W SG Y +Y + M Sbjct: 231 GMPIWLPNGALLRGNLEKLLYSAHIRREYLPVRGPELLRSHMWKISGHYYNYKENMYFTE 290 Query: 98 DRNDK----AMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 ND A YG P + IF ++SY+ LP ++ R E G++ Sbjct: 291 IENDDPEKPADEYGIKPMNCLAHVKIFGHKVRSYKELPLRLFEFGTVHRHEKSGVLHGLL 350 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK---SIPMRAESGPIGGD 205 R REF DA+ F P+ + K+ I R G I R E IG D Sbjct: 351 RVREFTQDDAHIF-CRPDQIEEEVIKVLEFVDSIMERFGFNYEMEISTRPEKS-IGSD 406 >gi|159155613|gb|AAI54534.1| LOC562037 protein [Danio rerio] Length = 476 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 70/337 (20%), Positives = 118/337 (35%), Gaps = 71/337 (21%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + ++S+R+LP Q R E + +R+REFL ++ ++ T Sbjct: 84 PTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHTAFATK 143 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E + ++ Y R++ L +IP +V E + F D+ Sbjct: 144 EEATEEVLQILDLYARVYEE--LMAIP----------------VVKGRKTEKEKFAGGDY 185 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 T + IS S R I+ Sbjct: 186 --------TTTVEAFIS--------------------------------ASGRAIQGATS 205 Query: 288 FYFGTKYSLPMSATFKGAD--GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 + G +S F+ G+ S+GI R + + D G++ P VA Sbjct: 206 HHLGQNFSRMFEIVFEDPKKPGEKQLAYQNSWGI-TTRTIGVLTMVHGDNMGLVLPPRVA 264 Query: 346 PFKISLINI-------KAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADL 397 ++ +I +A + D C K +RL K V D G +F +L Sbjct: 265 CLQVIIIPCGITATLPEAEKDLLLDQCSKYLSRLQKADIRVKADLRDNYSPGWKFNHWEL 324 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G P++ VG K + + R TG E ++++E Sbjct: 325 KGVPIRFEVGPKDLKQGQFVAVRRDTG--EKITVKEA 359 >gi|296242499|ref|YP_003649986.1| threonyl-tRNA synthetase editing domain-containing protein [Thermosphaera aggregans DSM 11486] gi|296095083|gb|ADG91034.1| Threonyl-tRNA synthetase editing domain protein [Thermosphaera aggregans DSM 11486] Length = 613 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 71/343 (20%), Positives = 142/343 (41%), Gaps = 46/343 (13%) Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV-MRSREFL 156 D + + Y H++ + R + SY +LPF +++ +R E R + R R+F Sbjct: 277 DEDRFVLRYAACHQQFA--MLRDWVISYSHLPFGAFEVADSYRLEQRGEVALCFRLRKFY 334 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 M D H +NK +R+ + K + E+G +G + V +D Sbjct: 335 MPDL-----------HIFNKNLEEAVRVSRIVQEKIL---EEAGKLGRKYVALYNVTSDF 380 Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 E ++ ++F + EN L +++ + + H + D+L + Sbjct: 381 LENH---RQELLEF-VRRENYPV-----LLAVIPGGIYYWVLNVEYH---IIDNLKRPRE 428 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSH- 333 ++ I+VG+ G ++++ TF G+ H+ + I G R + +++++ Sbjct: 429 IATFQIDVGN----GRRFNI----TFVDEKGEKHHPVIIHTAILGGVERYIYMILDTAAI 480 Query: 334 ---DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +G+ P ++P + +I + + KI L G V DD E +G Sbjct: 481 AEANGQTPYIPTWISPVQARIIPVSKE---YVEHALKIAVELQNQGFRVDVDDRDETLGK 537 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + A P V+VG + V + + ++ R + ++ MSLEE Sbjct: 538 KIRDAGREWIPYIVVVGEREVKTNTLNVRIRRSNDQKAMSLEE 580 >gi|38569901|gb|AAR24471.1| predicted threonyl-tRNA synthetase [uncultured crenarchaeote DeepAnt-EC39] Length = 616 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 72/325 (22%), Positives = 134/325 (41%), Gaps = 52/325 (16%) Query: 124 SYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY+NLP+ Y++ + FR E G+ R R F M D ++F + + K F Sbjct: 302 SYKNLPYKLYELTRYSFRREQSGELVGLRRLRAFTMPDCHAFCKDMSQAIDEFRKRFDLS 361 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + LG++ + E + ++DF + EN D Sbjct: 362 REVLSGLGIEE----------------------NDYEVGIRFTEDFYN-----ENKDL-- 392 Query: 242 IISLNS------IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 I L S ++E W + D+L + +S I+V + G +Y Sbjct: 393 IKQLVSKVGKPVLIEMWKEKFFYFVLKWEFNFIDNLGKASSLSTDQIDVEN----GKRYG 448 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAM-RVVAAVIESS----HDGKGIIWPDSVAPFKIS 350 + + + + H + + + GA+ RV+ A++E S DGK +P +AP ++ Sbjct: 449 ITFTDE---KNEQQHPIILHNSPSGAVERVIYALLEKSAMQIKDGKIPQFPLWLAPIQVR 505 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 LI +K D A + ++L++ V DD + IG + A+ +++G K Sbjct: 506 LIPLK--DDFLEFAS-NLASKLTEQNIRVDIDDRNDTIGKRIRDAEKEWINYVLVIGEKE 562 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVI 435 ++ S + ++ R TG +S E+ + Sbjct: 563 MNSSSLSVRDRTTGDVRQLSTEDFV 587 >gi|282889555|ref|ZP_06298097.1| hypothetical protein pah_c001o032 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500568|gb|EFB42845.1| hypothetical protein pah_c001o032 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 505 Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 15/114 (13%) Query: 82 ESGRYDSYGKEML-----RLADRNDK---------AMIYGPTHEEVMTDIFRSHIKSYRN 127 E+ + + KE RL +RN K +I PT E ++ + F ++SYR+ Sbjct: 82 EAAHVEGFAKECAVVTHHRLEERNGKLIPTGELEEPLIVRPTSETIIGESFSRWVESYRD 141 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 LP Q R E+RPR +R+ EFL ++ ++ + E + KM Y Sbjct: 142 LPLLINQWANVVRWEMRPRI-FLRTAEFLWQEGHTVHASSEEAFEETLKMLEVY 194 >gi|251783202|ref|YP_002997507.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391834|dbj|BAH82293.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 425 Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 26/184 (14%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G E+ P + + D +G+Y + ++ L+D N + PT E +T+ + Sbjct: 183 DEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYY 239 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I + LP F + FR E R G++R +F + F PE S Sbjct: 240 RGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQEL 298 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIP 233 KM + I +LGL P R ++ TG+ +K + ++ IP Sbjct: 299 EKMTANAENILQKLGL---PYR--------------VIALCTGDMGFSAAKTYDLEVWIP 341 Query: 234 SENT 237 ++NT Sbjct: 342 AQNT 345 >gi|313230616|emb|CBY18832.1| unnamed protein product [Oikopleura dioica] Length = 768 Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 19/104 (18%) Query: 316 SYGIGAMRVVAAVIESSH-----DG-KGIIWPDSVAPFK---ISLINIK----AHDQVCR 362 S+G+G R+++A++E S DG K +P SVAP+K +++IN+K D V R Sbjct: 556 SFGLG--RILSALLEHSFQQREVDGRKFFTFPPSVAPYKASVMTIINMKELDVKADAVAR 613 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 CE+ LS + D D G+ IG ++++ D +G P +++ Sbjct: 614 LICEE----LSSLSVDYRVDTGGKTIGRKYSLNDEIGVPYGIVI 653 >gi|329765249|ref|ZP_08256829.1| threonyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138155|gb|EGG42411.1| threonyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 624 Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust. Identities = 65/323 (20%), Positives = 134/323 (41%), Gaps = 46/323 (14%) Query: 124 SYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY+NLP+ Y++ + FR E G+ R R F M D ++F E S Sbjct: 310 SYKNLPYKLYELTRYSFRREQSGELVGLRRLRAFTMPDCHAFCKDIEQS----------- 358 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +K I +R + + ++ E ++ E + ++DF + + ++ Sbjct: 359 --------IKEIKVRFD---LSRNVLKELGIVDSDYEMAIRFTEDFYN----ENKSSIEE 403 Query: 242 IISLNS---IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 ++ + +VE W + DS+ + +S I+V + G +Y + Sbjct: 404 LVKKHGRPVLVEMWKEKFFYFVLKWEFNFVDSMGKASALSTDQIDVEN----GNRYGIEF 459 Query: 299 SATFKGADGKDHYVQMGSYGIGAM-RVVAAVIESS----HDGKGIIWPDSVAPFKISLIN 353 + + H + + + GA+ R+V ++E + +G+ +P +AP ++ +I Sbjct: 460 ---VDEHNVRKHPIILHNSPSGAIERIVYVLLEKAAQDIKEGRKPQFPLWLAPTQVRVIP 516 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 +K + C+ + +LS V DD E IG + A+ +++G K + Sbjct: 517 LK---EEFSSICDTLVDKLSSFNIRVDIDDRNESIGKRIRDAEKDWIRYTLVIGEKEANS 573 Query: 414 SKVEIKHRLTGIREDMSLEEVIN 436 + I+ R TG +++ + IN Sbjct: 574 ENLSIRDRQTGNVRELTFDNFIN 596 >gi|322514773|ref|ZP_08067797.1| threonine--tRNA ligase [Actinobacillus ureae ATCC 25976] gi|322119269|gb|EFX91397.1| threonine--tRNA ligase [Actinobacillus ureae ATCC 25976] Length = 653 Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust. Identities = 82/411 (19%), Positives = 147/411 (35%), Gaps = 48/411 (11%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW +G + +Y Sbjct: 266 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYAD 325 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 326 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 384 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 385 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFSNIQVKLSTRPENRIGDD-- 441 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E D + + + ++ I E A Y + Sbjct: 442 ----AMWDRAE-------DGLAKALTANGLSYE-------IQEGEGAFYGPKIEFALRDC 483 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGAD-GKDHYVQMGSYGIGAMRV 324 D R + G I ++LP + A++ D G+ V + +G++ Sbjct: 484 LD----------REWQCGTI---QLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIER 530 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +I + G +P +AP + ++NI D +K+ LS G D Sbjct: 531 FIGIITEEYAG---FFPTWLAPTQAVVMNITDSQA---DYVQKVTKALSDAGIRAKSDLR 584 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 E++G + L P ++ G K + KV ++ R ++EE + Sbjct: 585 NEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRTRKGADLGTFTIEEFV 635 >gi|294011681|ref|YP_003545141.1| prolyl-tRNA synthetase [Sphingobium japonicum UT26S] gi|292675011|dbj|BAI96529.1| prolyl-tRNA synthetase [Sphingobium japonicum UT26S] Length = 508 Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 13/167 (7%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G + GT +S + F+ A+G+ Q S+G+ + R++ +I D G+ Sbjct: 232 GKALQAGTSHFLGTTFSSAQNIKFQNAEGQQELAQTTSWGM-STRMIGGLIMVHGDDDGL 290 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 P +AP+++ ++ + D D C + A L++ DVF + + + + A A Sbjct: 291 RVPPRIAPYQVVVVPMLRDTDEDAAILDYCGDLVAELNR--QDVFREPVRALLDRRPAKA 348 Query: 396 D-------LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G P+ + VG + V+ V + R RED L+ I Sbjct: 349 ANKRWGWVKKGAPIVIEVGGRDVAGGNVSVIRRDRLYREDGKLDSRI 395 >gi|222148633|ref|YP_002549590.1| threonyl-tRNA synthetase [Agrobacterium vitis S4] gi|254783504|sp|B9JWF4|SYT_AGRVS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|221735619|gb|ACM36582.1| threonyl-tRNA synthetase [Agrobacterium vitis S4] Length = 666 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 85/217 (39%), Gaps = 24/217 (11%) Query: 7 FLPILQENPRDAEIASHKLMLRT-GMIH--QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L IL E AE H+ + R + H + G+ W G K ++ A +R Sbjct: 234 YLHILAE----AEKRDHRKLGREMDLFHFQEEGPGVVFWHGKGWKMFQSLTAYMRRRLAN 289 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----------DRNDKAMIYGPTHEE 112 T E++ P + LW SG + Y + M + + + + P + Sbjct: 290 TYQ-EVNAPQVLDKSLWETSGHWGWYQENMFAVKSAHAFTNPNDPEADQRVFALKPMNCP 348 Query: 113 VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSK 171 IF+ +KSYR LP + L R E G+MR R F DA+ F T E Sbjct: 349 GHVQIFKHGLKSYRELPVRLAEFGLVHRYEASGALHGLMRVRGFTQDDAHVF-CTEEQMA 407 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 ++ L ++ G K + ++ + P +G D Sbjct: 408 AECLRINDLILSVYEDFGFKEVVVKLSTRPEKRVGSD 444 >gi|319744352|gb|EFV96713.1| serine--tRNA ligase [Streptococcus agalactiae ATCC 13813] Length = 425 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IYS++ LD E + G E+ P + Sbjct: 154 RGAKVTGSRFLFYKGLGARLERAIYSFM------LD--------EHAKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELAD---SPFVLIPTAEVPLTNYYRDEIIDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|312384017|gb|EFR28854.1| hypothetical protein AND_02684 [Anopheles darlingi] Length = 766 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G + P G + + IR E + G E+ P + +A LW SG + Y + Sbjct: 289 HELSPGSCFFQPKGAFIYNTLMNFIRAEYRKRGFQEVISPNIYNAKLWQTSGHWQHYAEN 348 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M + + P + IF +S+R LP + R+EL G+ R Sbjct: 349 MFSFESEKETFAL-KPMNCPGHCLIFDHRNRSWRELPLRMADFGVLHRNELSGALTGLTR 407 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 408 VRRFQQDDAHIF 419 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 27/120 (22%), Positives = 61/120 (50%), Gaps = 9/120 (7%) Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGC 377 +G++ + A++ ++ GK WP ++P ++ ++ + A+D+ +K+ RL G Sbjct: 546 LGSVERMIAILTENYAGK---WPFWLSPRQVMVVPVGPAYDEYA----DKVRLRLHDAGF 598 Query: 378 DVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 V D D G+ + + A L F ++VG K S V ++ R + +++++E++ Sbjct: 599 TVEADLDAGDTMNKKIRNAQLAQFNFILVVGEKERSSETVNVRTRDNKVHGEVTVDELVT 658 >gi|229582573|ref|YP_002840972.1| Glycine--tRNA ligase [Sulfolobus islandicus Y.N.15.51] gi|228013289|gb|ACP49050.1| Glycine--tRNA ligase [Sulfolobus islandicus Y.N.15.51] Length = 473 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 8/153 (5%) Query: 290 FGTKYSLPMSATFKGAD----GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 + T Y L + + GA+ G +V S+G+ + + ++ WP Sbjct: 307 YRTDYDLTVHSKHSGANLSENGMIPHVVEPSFGLDRIAMAVLLLNYDPSPSDRNWPLFRI 366 Query: 346 PFKISLINIKA----HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 P+KIS + + H + EK+ L +G F +I +Q+A AD LG P Sbjct: 367 PYKISPLEVGIASIHHSDEYINVAEKVDLTLRSLGYVTFKLFEKGKIEAQYAKADTLGIP 426 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 L V V SK + ++ V I++R T + +++ E+ Sbjct: 427 LVVTVDSKTLDENTVTIRNRDTKAQIRVNIREI 459 >gi|83770284|dbj|BAE60417.1| unnamed protein product [Aspergillus oryzae] Length = 620 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (48%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 205 EKKIAIRPTSETVMYPYYSKWIRSHRDLPLKLNQWNSVVRWEFKNPQPFLRTREFLWQEG 264 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ LT +G+ + Y +I+ L Sbjct: 265 HTAHLTKDGAHDEVMHILDLYAQIYEEL 292 >gi|124486137|ref|YP_001030753.1| hypothetical protein Mlab_1319 [Methanocorpusculum labreanum Z] gi|124363678|gb|ABN07486.1| threonyl-tRNA synthetase [Methanocorpusculum labreanum Z] Length = 586 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 8/157 (5%) Query: 11 LQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 LQE +AE H+ + ++ M G +LP G +++ RE G Sbjct: 186 LQE---EAERRDHRKIGKEMKLFMFSDEGPGFPFFLPNGMIVRNSLLDYWRELHAENGYQ 242 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E+S P + + LW SG +D Y K+ + +D+ P + ++ + SYR Sbjct: 243 EISTPLIMNRCLWETSGHWDHY-KDNMYATCIDDEDYCIKPMNCPGGVMVYANEPHSYRE 301 Query: 128 LPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 LP ++ L R EL+ G+ R R F DA+ F Sbjct: 302 LPMRLAELGLVHRHELKGTLHGLFRVRCFTQDDAHIF 338 >gi|116626335|ref|YP_828491.1| threonyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] gi|116229497|gb|ABJ88206.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] Length = 644 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 80/395 (20%), Positives = 151/395 (38%), Gaps = 43/395 (10%) Query: 30 GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 G+I H KG + +K L++ +R++ + G + P + DLW SG + Y Sbjct: 262 GLIFFHPKG-----GIIRKLLED---WMRDQYLKRGYSLVYTPHVAKLDLWKTSGHANFY 313 Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-G 148 + M + +D P + I+ +SYR+LP ++ +R E G Sbjct: 314 AQNMFTPIELDDAEYQLKPMNCPFHILIYADRQRSYRDLPVRLGELGTVYRYERSGTLNG 373 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 + R R F DA+ F + + + N + + + G + AE G S Sbjct: 374 LFRVRGFTQDDAHIFCMQSQAEEEVVNCLQFA-IDTLAAYGFEK--YDAEISTWDGGASG 430 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS-IVEQWTAPYAATSDVHNEKL 267 ++ D E + + D + +N+ +V A Y DV KL Sbjct: 431 KYDGTPDQWEMAEGALRRAV------------DKLKINAKVVADEAAFYGPKIDV---KL 475 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVA 326 D++ ++S + FG +Y G DGK H M + G++ Sbjct: 476 VDAIGRKWQLSTVQFDFTLPRRFGLEYI--------GEDGKAHQPIMVHRALYGSIERFF 527 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 ++ + G +W +AP + +++ I + I +L + G D+ E Sbjct: 528 GILVEHYAGAFPVW---LAPVQATILPITDRQT---EYARGIKKQLEEAGIRATVDERNE 581 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ + A + P ++VG + KV +++R Sbjct: 582 KVNLKIRDAQMQKIPYMLVVGDREQESGKVAVRNR 616 >gi|296203929|ref|XP_002749128.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like [Callithrix jacchus] Length = 726 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + ++ LW SG + Y + Sbjct: 339 HDLSPGSCFFLPRGAFIYNTLVDFIREEYHKRDFTEVLSPNMFNSKLWEASGHWQHYSEN 398 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P F + R+EL G+ R Sbjct: 399 MFTFEIEKD-TFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTR 457 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 458 VRRFQQDDAHIF 469 >gi|22536539|ref|NP_687390.1| seryl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|25010417|ref|NP_734812.1| seryl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|76787984|ref|YP_329077.1| seryl-tRNA synthetase [Streptococcus agalactiae A909] gi|76798994|ref|ZP_00781192.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77406550|ref|ZP_00783601.1| seryl-tRNA synthetase [Streptococcus agalactiae H36B] gi|77411466|ref|ZP_00787811.1| seryl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|54039691|sp|P67566|SYS_STRA5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|54042042|sp|P67565|SYS_STRA3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123602391|sp|Q3K326|SYS_STRA1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|22533373|gb|AAM99262.1|AE014208_2 seryl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|23094769|emb|CAD45988.1| seryl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|76563041|gb|ABA45625.1| seryl-tRNA synthetase [Streptococcus agalactiae A909] gi|76585644|gb|EAO62204.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77162469|gb|EAO73435.1| seryl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|77174857|gb|EAO77675.1| seryl-tRNA synthetase [Streptococcus agalactiae H36B] Length = 425 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IYS++ LD E + G E+ P + Sbjct: 154 RGAKVTGSRFLFYKGLGARLERAIYSFM------LD--------EHAKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELAD---SPFVLIPTAEVPLTNYYRDEIIDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|77409224|ref|ZP_00785933.1| seryl-tRNA synthetase [Streptococcus agalactiae COH1] gi|77172167|gb|EAO75327.1| seryl-tRNA synthetase [Streptococcus agalactiae COH1] Length = 425 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IYS++ LD E + G E+ P + Sbjct: 154 RGAKVTGSRFLFYKGLGARLERAIYSFM------LD--------EHAKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELAD---SPFVLIPTAEVPLTNYYRDEIIDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|302423350|ref|XP_003009505.1| bifunctional aminoacyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] gi|261352651|gb|EEY15079.1| bifunctional aminoacyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] Length = 535 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 5/129 (3%) Query: 65 GAIEMSVPT-LQSADLWVESGRYDSYGKEMLRLADRNDK----AMIYGPTHEEVMTDIFR 119 G E S P L S L E + + E+ + DK + PT E VM + Sbjct: 126 GVEETSFPIFLSSKSLEKEKDHVEGFAPELAWVTKAGDKDLEVPVAVRPTSEAVMYPYYS 185 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 I+S+R+LP Q R E + +R+REFL ++ ++ LT E + ++ Sbjct: 186 KWIRSHRDLPLRLNQWNSVVRWEAKQTTPFLRTREFLWQEGHTAHLTEELAGKEVLEILE 245 Query: 180 SYLRIFHRL 188 Y ++ +L Sbjct: 246 LYAGVYEQL 254 >gi|77414886|ref|ZP_00790994.1| seryl-tRNA synthetase [Streptococcus agalactiae 515] gi|77159061|gb|EAO70264.1| seryl-tRNA synthetase [Streptococcus agalactiae 515] Length = 425 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IYS++ LD E + G E+ P + Sbjct: 154 RGAKVTGSRFLFYKGLGARLERAIYSFM------LD--------EHAKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELAD---SPFVLIPTAEVPLTNYYRDEIIDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYQELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R ++ TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VITLCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|312136460|ref|YP_004003797.1| glycyl-tRNA synthetase [Methanothermus fervidus DSM 2088] gi|311224179|gb|ADP77035.1| glycyl-tRNA synthetase [Methanothermus fervidus DSM 2088] Length = 591 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 22/134 (16%) Query: 117 IFRSHIKSYRN-LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 +F+ ++ YRN LPF QI FR+E+ PR GV+R REF +A F + P+ H Sbjct: 176 LFKRLMRFYRNKLPFGVVQIGKSFRNEISPRQGVIRLREFTQAEAEIF-VEPDNKTHPK- 233 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH---------EFIVLADTGETQVFCSKD 226 FH++ + + + + + G+ E I+ ++ ++ +K+ Sbjct: 234 ---------FHKVADEKLKLFSAEKQLNGEKPEKISLKEAVDENIISSELLAYHLYLTKE 284 Query: 227 FM-DFPIPSENTDF 239 F+ D IP E F Sbjct: 285 FLTDLGIPEEMIRF 298 >gi|312879874|ref|ZP_07739674.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] gi|310783165|gb|EFQ23563.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] Length = 631 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 3/126 (2%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA 103 P G L + + E R G E+ P + LW SG +D Y ++ + +++ Sbjct: 264 PKGMVVLGELVNFWKREHQRRGYCEIRTPLILDRALWERSGHWDHY-RDNMYFTTIDERP 322 Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYS 162 P + +F+S +SYR+LP ++ R E G+MR R F DA+ Sbjct: 323 FAIKPMNCPGGILVFKSSTRSYRDLPLRMGELGTVHRHERSGVLHGLMRVRCFTQDDAHL 382 Query: 163 FDLTPE 168 + TP+ Sbjct: 383 Y-CTPD 387 >gi|296804108|ref|XP_002842906.1| prolyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238845508|gb|EEQ35170.1| prolyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 600 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 43/88 (48%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 185 EKKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNPQPFLRTREFLWQEG 244 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ LT E + ++ Y ++ +L Sbjct: 245 HTAHLTKEEAHEEVLQILQHYAHVYEQL 272 >gi|225559335|gb|EEH07618.1| prolyl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 606 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 40/81 (49%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + I+S+R+LP Q R E + +R+REFL ++ ++ LT Sbjct: 199 PTSETVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEFKNPQPFLRTREFLWQEGHTAHLTE 258 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 G++ ++ Y ++ L Sbjct: 259 GGAREEVLQILEHYAHVYEEL 279 >gi|269925242|ref|YP_003321865.1| threonyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] gi|269788902|gb|ACZ41043.1| threonyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] Length = 596 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 79/390 (20%), Positives = 148/390 (37%), Gaps = 40/390 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEM---L 94 G+ WLP G + I + + R G + P + L+ SG + Y M + Sbjct: 216 GLVLWLPNGSIIRRELENFIVKAEAREGYQHVYTPHIAKLGLYKTSGHWQHYRDAMFPPM 275 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 L D + + +M I++ ++SYR+LP ++ +R E G+ R R Sbjct: 276 VLEDGEEYELRPMTCPHHIM--IYKHSLRSYRDLPLRIAELGTVYRYEKSGELTGMSRVR 333 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F + DA+ F P+ K + ++ ++ +G R + L Sbjct: 334 GFTINDAHIF-CRPDQLKEEFIRVIQLMHEVYRAVGFHDYVYR--------------LSL 378 Query: 214 ADTGETQVFCSKDFM-DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 D + + + D M + + D++ + E A Y DV + D L Sbjct: 379 RDPSDKEKYVEGDEMWNNAENAIRQALDELGADYVEAEGEAAFYGPKLDV---MVRDVLG 435 Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIES 331 S ++ FY ++ L + ADG + V + IG+M A + Sbjct: 436 REFAASTNQLD----FYLPERFDL----EYIDADGERRRPVMIHRAPIGSMERFFAFLTE 487 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 H G +W ++P ++ +I I A + E++ + S+ V D E++ ++ Sbjct: 488 QHAGAFPVW---LSPVQVVVIPI-ADRHIP--YAEEVASAFSRHNVRVNVDARNERMNAK 541 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 A + P +IVG + V ++ R Sbjct: 542 IRDAQMQKIPYMLIVGDREAQAGTVAVRKR 571 >gi|242024338|ref|XP_002432585.1| Threonyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus corporis] gi|212518045|gb|EEB19847.1| Threonyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus corporis] Length = 717 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 85/413 (20%), Positives = 155/413 (37%), Gaps = 50/413 (12%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G + P G + + IR E + G E+ P + + LW SG + Y Sbjct: 329 FFHELSPGSCFFYPKGAFIYNTLVEFIRSEYRKRGFQEVITPNIYNVKLWETSGHWQHYA 388 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + + P + IF + +S+R LP + R+E G+ Sbjct: 389 ENMFSF-ELEKETYALKPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNEFSGALSGL 447 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDL 206 R R F DA+ F T K + ++ G + +R + P +G Sbjct: 448 TRVRRFQQDDAHIF-CTVNQIKSEISGALEFLKNVYGVFGF-TFQLRLSTRPEKYLGE-- 503 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 I + D E Q+ S D FP D A Y D+ Sbjct: 504 ----INVWDQAEKQLTESLDEFGFPWKLNPGD--------------GAFYGPKIDI---T 542 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPM--SATFKGADG-KDHYVQMGSYGIGAMR 323 + D+L + + ++ + LP+ + + G G K V + +G++ Sbjct: 543 ILDALKRAHQCATIQLD----------FQLPIRFNLNYIGESGDKIRPVIIHRAILGSVE 592 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWD 382 + A++ S+ GK WP ++P + +I + + + + I+ + CD F D Sbjct: 593 RMIAILTESYGGK---WPFWLSPRQSIVIPVGLPFYEYAKKVKDDIFN--AGFSCD-FDD 646 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D G+ + + A L + +VG K + V ++ R + + S+ +VI Sbjct: 647 DEGDTMNKKIRNAQLAQYNFIFVVGEKEKNAGTVNVRTRDNIVHGEFSVGDVI 699 >gi|73951029|ref|XP_857141.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 2 [Canis familiaris] Length = 799 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE +R E+ P + ++ LW SG + Y + Sbjct: 412 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNMFNSKLWETSGHWQHYSEN 471 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P + R+EL G+ R Sbjct: 472 MFTF-DIEKDTFALKPMNCPGHCLMFAHRPRSWREMPVRLADFGVLHRNELSGTLSGLTR 530 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 531 VRRFQQDDAHIF 542 >gi|73951035|ref|XP_857273.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 5 [Canis familiaris] Length = 687 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G +LP G + + IREE +R E+ P + ++ LW SG + Y Sbjct: 410 FFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNMFNSKLWETSGHWQHYS 469 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M D P + +F +S+R +P + R+EL G+ Sbjct: 470 ENMFTF-DIEKDTFALKPMNCPGHCLMFAHRPRSWREMPVRLADFGVLHRNELSGTLSGL 528 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 529 TRVRRFQQDDAHIF 542 >gi|330836194|ref|YP_004410835.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] gi|329748097|gb|AEC01453.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] Length = 588 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 78/387 (20%), Positives = 147/387 (37%), Gaps = 39/387 (10%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+E + G + P + + LW SG Y M Sbjct: 211 GLVYWHPRGARVRVAIENFWRDEHYKNGYEMVFSPHVGRSWLWETSGHLGFYKDSMYPAM 270 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + + P + I+ + +SYR+LP ++ +R E G+MR R F Sbjct: 271 EMDKSDYYVKPMNCPFHIMIYNNSKRSYRDLPIRMAELGTVYRYEKAGALHGLMRVRGFT 330 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT 216 DA+ F TPE K+ L + G + + + P Sbjct: 331 QDDAHLF-CTPEQMDDEIRKVLEFSLYMLRSFGFQDVKAYLSTRP-----------EESV 378 Query: 217 GETQVF-CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 GE + + + + I E ++ + E A Y D+ K+ D++ Sbjct: 379 GERERWDAATKALRNAIEKEGLAYE-------VDEGGGAFYGPKIDL---KVKDAIGREW 428 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSHD 334 ++S V F ++ + TF DG++ M +G++ V+ ++ Sbjct: 429 QLST----VQFDFNMSDRFQM----TFVDKDGQEKRPYMIHRALLGSIERFFGVLIENYA 480 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 G +P +AP +I ++ + + + RL K G D +++ ++ Sbjct: 481 G---AFPPWLAPEQIMVVPV---GEAFFPYATALRDRLRKEGLRADADLSDDRMNAKIRN 534 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHR 421 A L P Q++VG + S+ KV +++R Sbjct: 535 AQLHKIPYQLVVGEREQSEDKVSVRYR 561 >gi|73951037|ref|XP_536172.2| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 1 [Canis familiaris] Length = 802 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE +R E+ P + ++ LW SG + Y + Sbjct: 415 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNMFNSKLWETSGHWQHYSEN 474 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P + R+EL G+ R Sbjct: 475 MFTF-DIEKDTFALKPMNCPGHCLMFAHRPRSWREMPVRLADFGVLHRNELSGTLSGLTR 533 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 534 VRRFQQDDAHIF 545 >gi|73951033|ref|XP_857231.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 4 [Canis familiaris] Length = 798 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE +R E+ P + ++ LW SG + Y + Sbjct: 412 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNMFNSKLWETSGHWQHYSEN 471 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P + R+EL G+ R Sbjct: 472 MFTF-DIEKDTFALKPMNCPGHCLMFAHRPRSWREMPVRLADFGVLHRNELSGTLSGLTR 530 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 531 VRRFQQDDAHIF 542 >gi|52425108|ref|YP_088245.1| threonyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E] gi|73919804|sp|Q65TQ0|SYT_MANSM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|52307160|gb|AAU37660.1| ThrS protein [Mannheimia succiniciproducens MBEL55E] Length = 643 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G + +YG Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYGD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIRMVYDIYSTFGFTNIAVKLSTRPENRIGDD 431 >gi|261189484|ref|XP_002621153.1| glycyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239591730|gb|EEQ74311.1| glycyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239608956|gb|EEQ85943.1| glycyl-tRNA synthetase [Ajellomyces dermatitidis ER-3] gi|327354027|gb|EGE82884.1| glycyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 656 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 10/126 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++A ++E + + +G++ +P VAP K+ L+ + H + ++ Sbjct: 504 SFGIG--RILACLMEHVYWSRPDDEARGVLSFPPIVAPTKVLLVPLSNHPSF-QPLVHRL 560 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L ++G DD IG ++A D LG P + V + V D+ ++ R T + Sbjct: 561 TLKLRRLGVSNRVDDSSASIGKRYARNDELGTPFGITVDFQSVKDNTFTLRERDTTKQVR 620 Query: 429 MSLEEV 434 S EE+ Sbjct: 621 ASEEEI 626 Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 6/62 (9%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK-----HSYNKMFVS 180 +++PF I FR+E+ PR G++R REFLM + F + PEG K H M +S Sbjct: 238 QSMPFASASIGKSFRNEISPRSGLLRVREFLMAEIEHF-VDPEGGKKHPRFHEVQDMELS 296 Query: 181 YL 182 +L Sbjct: 297 FL 298 >gi|255720300|ref|XP_002556430.1| KLTH0H13046p [Lachancea thermotolerans] gi|238942396|emb|CAR30568.1| KLTH0H13046p [Lachancea thermotolerans] Length = 675 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 65/325 (20%), Positives = 121/325 (37%), Gaps = 70/325 (21%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + ++SYR+LP Q R E + +R+REFL ++ ++ L Sbjct: 278 PTSETVMYPYYAKWVQSYRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTAHLGQ 337 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E + ++ Y ++ L ++P +V E + F DF Sbjct: 338 EEAIEEVMQILDFYAGVYEE--LLAVP----------------VVKGKKTEKEKFAGGDF 379 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + E + +P+ R GI+ Sbjct: 380 ------------------TTTCEGY------------------IPQTGR----GIQGATS 399 Query: 288 FYFGTKYSLPMSATFKGADGKDH---YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 + G +S + + + G +H + S+G+ + RV+ ++ D KG++ P V Sbjct: 400 HHLGQNFSKMFNISVENPLGPEHPKVFAHQNSWGL-STRVIGVMVMIHSDNKGLVIPPRV 458 Query: 345 APFKISL----INIKAHDQ---VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVAD 396 + + + IN K D+ V +I +L F D + G +F+ + Sbjct: 459 SQHQCVVLPVGINSKTSDEQRAVIHQKAREIEQKLRASNVRAFGDYNDNYTPGWKFSQYE 518 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHR 421 L G PL++ G K ++ +V + R Sbjct: 519 LKGIPLRLEFGPKDMAQDQVSVVRR 543 >gi|42523294|ref|NP_968674.1| hypothetical protein Bd1807 [Bdellovibrio bacteriovorus HD100] gi|39575499|emb|CAE79667.1| thrS [Bdellovibrio bacteriovorus HD100] Length = 416 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 2/176 (1%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G D + + RE + G + P L DL+ +SG Y M Sbjct: 37 GLPLWLPAGVVIRDELEKLARELEFLAGYQRVVSPHLAKEDLYHQSGHLPYYEDSMYPSM 96 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D + P IF + + SYR LP + +R E G+MR R Sbjct: 97 DLENVRYRLRPMCCPHHHKIFSAKLHSYRELPLRLAEYGQVYRYEGSGALSGLMRVRGLC 156 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 DA+ + + K +K+ Y + + LG+ +R G + S +++ Sbjct: 157 QNDAHLY-VRQNQVKVEIHKVLEMYQKAYRILGISDYRLRLSRGVEAEEASQKYVA 211 >gi|326437267|gb|EGD82837.1| threonyl-tRNA synthetase 1 [Salpingoeca sp. ATCC 50818] Length = 604 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 16/149 (10%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M H S G +LP G + L + +IR + G E+ P + S LW SG +D Y Sbjct: 175 MQHDTSPGAPFFLPHGVRLLHRLTDLIRRQFRIRGYEEVMTPLVFSQKLWETSGHWDHYR 234 Query: 91 KEMLRLADRNDKAMI---------------YGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 +M R+ ++K+ P + IF+ +S+ +LP + Sbjct: 235 DDMYRVMGFDEKSSGNGGNDDDDDDEYLRGLKPMNCPAHCLIFKHTKRSHHDLPLRLGEF 294 Query: 136 QLKFRDELRPRF-GVMRSREFLMKDAYSF 163 R+E G+ R R+F DA+ F Sbjct: 295 SALHRNEASGALAGLTRVRQFHQDDAHIF 323 >gi|225461914|ref|XP_002265484.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 745 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G + +LP G + + + I+ + G E+ PT+ + LW SG +Y Sbjct: 364 FCHPLSPGSWFFLPHGGRIYNKLMEFIKAQYRERGYHEVFSPTMYNMQLWETSGHAANY- 422 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + + + + P + +F ++SYR LP + R+E G+ Sbjct: 423 KENMFVFEVEKQEFGLKPMNCPGHCLMFEHRVRSYRELPLRLADFGVLHRNEASGALTGL 482 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 483 TRVRRFQQDDAHIF 496 >gi|254423005|ref|ZP_05036723.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7335] gi|196190494|gb|EDX85458.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7335] Length = 618 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 3/132 (2%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML-RL 96 G+ W P G + ++ EQ G + + P + DL+ SG + Y +++ + Sbjct: 235 GLPLWTPKGTVLRSTLEDYLKGEQVARGYLPVVTPHVGRVDLFKTSGHWQKYSEDLFPMM 294 Query: 97 ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREF 155 + D+ + + I++S ++SY+ LP + +R E G+ R R F Sbjct: 295 GESEDEGFVLKAMNCPFHVQIYKSQLRSYKELPIRLAEFGTVYRYEQSGELGGLTRVRGF 354 Query: 156 LMKDAYSFDLTP 167 DA+ F +TP Sbjct: 355 TQDDAHLF-VTP 365 >gi|156049881|ref|XP_001590907.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980] gi|154693046|gb|EDN92784.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980 UF-70] Length = 576 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 80/380 (21%), Positives = 139/380 (36%), Gaps = 72/380 (18%) Query: 68 EMSVPT-LQSADLWVESGRYDSYGKEMLRLADRNDK----AMIYGPTHEEVMTDIFRSHI 122 E S P L S L E + + E+ + DK + PT E VM + I Sbjct: 116 EASFPMFLSSKSLEKEKDHVEGFAPELAWVTKAGDKDLEVPVAVRPTSEAVMYPYYSKWI 175 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 +S+R+LP Q R E + +R+REFL ++ ++ LT E + ++ Y Sbjct: 176 RSHRDLPLRLNQWNSVVRWEAKQTTPFLRAREFLWQEGHTAHLTEELAGEEVLQILEFYA 235 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + L ++P +V E + F + T + Sbjct: 236 GVYEQ--LLAVP----------------VVRGRKTEKEKFAGGYY--------TTTVEGY 269 Query: 243 ISLNSIVEQWTAPYAATSDVHNE---KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I N Q ATS + K+FD E+ G + GH+ Sbjct: 270 IPSNGRGIQ-----GATSHCLGQNFSKMFDITVEDP-TPKNGEKAGHL------------ 311 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 +V S+G+ + RV+ ++ D KG++ P +A + +I + ++ Sbjct: 312 -----------HVWQNSWGL-STRVIGVMVMIHGDDKGLVLPPRIAKLQAIIIPVGITNK 359 Query: 360 VCR-------DACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFV 411 D + I L K G +D G +F +L G PL++ G + Sbjct: 360 TTPEEKAKRYDELQSIKDTLKKAGVRADYDIRDGYTPAWKFNDWELKGVPLRLEYGPRDA 419 Query: 412 SDSKVEIKHRLTGIREDMSL 431 + V R TG + +S+ Sbjct: 420 AQEVVSYARRDTGEKGTISI 439 >gi|297529263|ref|YP_003670538.1| histidyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|297252515|gb|ADI25961.1| histidyl-tRNA synthetase [Geobacillus sp. C56-T3] Length = 426 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 98/455 (21%), Positives = 167/455 (36%), Gaps = 70/455 (15%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVES--GRYDS 88 M Q +G LP + V I R +R G E+ P + +L++ D Sbjct: 1 MAFQIPRGTQDVLPGDTEKWQYVEHIARSLCSRYGYQEIRTPIFEHTELFLRGVGDTTDI 60 Query: 89 YGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH-IKSYRNLPFTFYQIQLKFRDELRPRF 147 KEM D+ +A+ P + F H + N P Y FR E RP Sbjct: 61 VQKEMYTFEDKGGRALTLRPEGTAPVVRAFVEHKLYGSPNQPLKLYYSGPMFRYE-RPEA 119 Query: 148 GVMRSREFLMKDAYSFDLTPEGSKHSY--NKMFVSYLRIFHRLGLKSIPM---------- 195 G R R+F+ F + GS ++ + I+ LGLK I + Sbjct: 120 G--RFRQFV-----QFGVEALGSSDPAIDAEVMALAMHIYEALGLKRIRLVINSLGDLDS 172 Query: 196 -RAESGPIGGDLSHEFIVLADTGETQVF--------CSKDFMDFPIPSENTDFDDIISLN 246 RA + S L +T++ C KD D + + D ++ + Sbjct: 173 RRAHREALVRHFSSRIHELCPDCQTRLHTNPLRILDCKKD-RDHELMATAPSILDYLNED 231 Query: 247 S-----IVEQWTA----PYAATS------DVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 S V+Q+ P+ S D +N F+ + E + A G Y G Sbjct: 232 SRAYFEKVKQYLTNLGIPFVIDSRLVRGLDYYNHTTFEIMSEAEGFGAAATLCGGGRYNG 291 Query: 292 TKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKIS 350 + G +G + + R++AA+ D +G+ P +S + Sbjct: 292 LVQEI----------GGPETPGIG-FALSIERLLAAL-----DAEGVELPVESGLDCYVV 335 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + +A D+ R +YA L + G V D +G ++ +Q AD LG I+G + Sbjct: 336 AVGERAKDEAVR----LVYA-LRRFGLRVDQDYLGRKLKAQLKAADRLGASFVAIIGDEE 390 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + + +KH +G + ++ L E+ ++ R Sbjct: 391 LERQEAAVKHMASGEQTNVPLGELAHFLHERIGKE 425 >gi|294887331|ref|XP_002772056.1| glycyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] gi|239875994|gb|EER03872.1| glycyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] Length = 596 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 11/115 (9%) Query: 316 SYGIGAMRVVAAVIESSHDGKG---------IIWPDSVAPFKISLINIKAHDQVCRDACE 366 ++G+G R++ ++E + + + P VAP K+S++ I ++ + A Sbjct: 442 AFGVG--RIIYTILEHTFRSREMEDQELRCYLSLPPVVAPTKVSVLPISSNPTQFKPAMH 499 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 KI L + G DD G+ IG ++A D +G P + + + ++D V ++ R Sbjct: 500 KITDALKEHGISYKVDDSGQAIGKRYARTDEIGIPFGITIDFQSLNDDTVTLRER 554 >gi|239614077|gb|EEQ91064.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis ER-3] gi|327353430|gb|EGE82287.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 607 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 40/81 (49%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + I+S+R+LP Q R E + +R+REFL ++ ++ LT Sbjct: 200 PTSETVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEFKNPQPFLRTREFLWQEGHTAHLTE 259 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 G++ ++ Y ++ L Sbjct: 260 AGAREEVLQILEHYAHVYEDL 280 >gi|225570967|ref|ZP_03779990.1| hypothetical protein CLOHYLEM_07071 [Clostridium hylemonae DSM 15053] gi|225160429|gb|EEG73048.1| hypothetical protein CLOHYLEM_07071 [Clostridium hylemonae DSM 15053] Length = 473 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 16/135 (11%) Query: 319 IGAMRVVAAVIESSHDGKGIIWPD---------SVAPFKISLINIKAHDQVCRDACEKIY 369 +GA R+V A + S++D + + D ++AP K+ ++ + + + EK+Y Sbjct: 344 LGADRMVLAFLCSAYDEEELEGGDMRTVLHFHPALAPIKVGVLPLS---KKLNEGAEKVY 400 Query: 370 ARLS-KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 A+LS K C+ +DD G IG ++ D +G P V + D V ++ R T +E Sbjct: 401 AQLSRKYNCE--FDDRG-NIGKRYRRQDEIGTPFCVTYDFESEEDGAVTVRDRDTMEQER 457 Query: 429 MSLEEVINYASHRFS 443 + +EE+ +Y + +F Sbjct: 458 VKIEELESYFAKKFE 472 >gi|311246798|ref|XP_003122346.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like [Sus scrofa] Length = 801 Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust. Identities = 84/411 (20%), Positives = 156/411 (37%), Gaps = 47/411 (11%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE ++ E+ P + S+ LW SG + Y + Sbjct: 414 HDLSPGSCFFLPRGAFIYNALMDFIREEYHQRSFTEVLSPNMYSSKLWEASGHWQHYREN 473 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D + P + +F +S+R +P F + R+EL + Sbjct: 474 MFTF-DVDKDTFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSETLSSLTH 532 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 R F DA+ F T E + ++ G S + + P D E + Sbjct: 533 VRRFQQDDAHIF-CTVEQIEEEIKGCLKFLQSVYSTFGF-SFQLNLSTRP--EDFLGE-V 587 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + D E Q+ ++F P + D A Y D+ K+ D++ Sbjct: 588 AIWDEAEKQL--QNSLVEFGKPWKMKPGDG------------AFYGPKIDI---KIKDAI 630 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + + ++ F Y K D K + V + +G++ + A++ Sbjct: 631 GRYHQCATIQLDFQLPIRFNLTY------VSKEGDDKKNPVIIHRAILGSVERMIAILSE 684 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK------VGCDVFWDDMG 385 +++GK WP ++P ++ +I + ACEK ++S DV D Sbjct: 685 NYEGK---WPFWLSPRQVIVIPVGP-------ACEKYALQVSNEFLEEGFMADVDLDHSC 734 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + + A L + ++VG K +++ V ++ R I ++S+ I+ Sbjct: 735 -TLNKKIQNAQLAQYNFILVVGEKEKANNAVSVQTRDNKIHGEISVTSAID 784 >gi|261204761|ref|XP_002629594.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239587379|gb|EEQ70022.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] Length = 606 Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 40/81 (49%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + I+S+R+LP Q R E + +R+REFL ++ ++ LT Sbjct: 200 PTSETVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEFKNPQPFLRTREFLWQEGHTAHLTE 259 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 G++ ++ Y ++ L Sbjct: 260 AGAREEVLQILEHYAHVYEDL 280 >gi|213580910|ref|ZP_03362736.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 234 Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 2/133 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G +D+Y Sbjct: 85 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 144 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + I P + IF +KSYR+LP + R+E G+M Sbjct: 145 AMFTTSSENREYCI-KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 203 Query: 151 RSREFLMKDAYSF 163 R R F DA+ F Sbjct: 204 RVRGFTQDDAHIF 216 >gi|297817558|ref|XP_002876662.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297322500|gb|EFH52921.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 522 Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust. Identities = 32/157 (20%), Positives = 72/157 (45%), Gaps = 7/157 (4%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + RG++ G ++ ++ + V S+ + R + +I + D KG Sbjct: 257 TGRGVQGATSHCLGQNFAKMFEINYENEKAETAMVWQNSWAY-STRTIGVMIMTHGDDKG 315 Query: 338 IIWPDSVAPFKISLINIK---AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI--GSQF 392 ++ P VA ++ +I + A+ Q DAC + L + G +D+ + G ++ Sbjct: 316 LVLPPKVASVQVVVIPVPYKDANTQGIYDACTATASALCEAGIRAE-EDLRDNYSPGWKY 374 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 + ++ G PL++ +G + + + +V R G++ED+ Sbjct: 375 SDWEMKGVPLRIEIGPRDLENDQVRTVRRDNGVKEDI 411 >gi|156354210|ref|XP_001623293.1| predicted protein [Nematostella vectensis] gi|156209976|gb|EDO31193.1| predicted protein [Nematostella vectensis] Length = 559 Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G +LP G + + I+E+ + G E+ P + S LW SG + Y Sbjct: 170 FFHELSPGSCFFLPKGAVIYNTLINFIKEQYWKRGFQEVVSPNIYSTKLWETSGHWQHYS 229 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M + ++ P + +F +S+R LP + R+EL G+ Sbjct: 230 EHMFSF-EVEKESYALKPMNCPGHCLMFDHRPRSWRELPLRMADFGVLHRNELSGTLSGL 288 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 289 TRVRRFQQDDAHIF 302 >gi|73951031|ref|XP_857184.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 3 [Canis familiaris] Length = 711 Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + IREE +R E+ P + ++ LW SG + Y + Sbjct: 324 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNMFNSKLWETSGHWQHYSEN 383 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D P + +F +S+R +P + R+EL G+ R Sbjct: 384 MFTF-DIEKDTFALKPMNCPGHCLMFAHRPRSWREMPVRLADFGVLHRNELSGTLSGLTR 442 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 443 VRRFQQDDAHIF 454 >gi|225424719|ref|XP_002265302.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296086530|emb|CBI32119.3| unnamed protein product [Vitis vinifera] Length = 686 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G + +LP G + + + I+ + G E+ PT+ + LW SG +Y Sbjct: 305 FCHPLSPGSWFFLPHGGRIYNKLMEFIKAQYRERGYHEVFSPTMYNMQLWETSGHAANY- 363 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + + + + P + +F ++SYR LP + R+E G+ Sbjct: 364 KENMFVFEVEKQEFGLKPMNCPGHCLMFEHRVRSYRELPLRLADFGVLHRNEASGALTGL 423 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 424 TRVRRFQQDDAHIF 437 >gi|126277226|ref|XP_001373323.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 806 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H S G +LP G + + I+EE +R E+ P + ++ LW SG + Y + Sbjct: 419 HDLSPGSCFFLPRGAFIYNTLMDFIKEEYHRRNFTEVISPNVYNSKLWETSGHWQHYSEN 478 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 M D + P + +F +S+R +P + R+EL G+ R Sbjct: 479 MFSF-DIEKETFALKPMNCPGHCLMFAHRPRSWREMPIRLADFGVLHRNELSGTLSGLTR 537 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 538 VRRFQQDDAHIF 549 >gi|119191888|ref|XP_001246550.1| hypothetical prolyl-tRNA synthetase [Coccidioides immitis RS] Length = 603 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 43/88 (48%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 188 EKKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNPQPFLRTREFLWQEG 247 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ LT ++ ++ Y ++ +L Sbjct: 248 HTAHLTEAAAREEVLQILQHYAHVYEQL 275 >gi|328861801|gb|EGG10903.1| hypothetical protein MELLADRAFT_74104 [Melampsora larici-populina 98AG31] Length = 488 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 9/139 (6%) Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI---KAHDQV 360 G + +V S+G+ + R + ++ D KG++ P VA ++ +I + + Q Sbjct: 229 GVQAEKLFVWQNSWGL-STRTIGVMVMVHGDDKGLVLPPRVAQLQVIVIPVGIVASTTQE 287 Query: 361 CR----DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 R D E++ ARL K G D G G +F ++ G PL++ +G K +++ Sbjct: 288 GRKELYDKTEELAARLRKAGVRAKSDLREGYTPGWKFNSWEMKGIPLRLELGPKDLANQT 347 Query: 416 VEIKHRLTGIREDMSLEEV 434 + R TGI+ SL+++ Sbjct: 348 TLVVRRDTGIKTPFSLDKL 366 Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 38/81 (46%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + I+SYR+LP Q R E + +R+REFL ++ ++ LT Sbjct: 81 PTSETVMYPYYAKWIQSYRDLPLKINQWNSVVRWEFKNPQPFIRTREFLWQEGHTAHLTK 140 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 + ++ Y ++ L Sbjct: 141 PEADTEVRQILDLYKGVYEEL 161 >gi|326471753|gb|EGD95762.1| threonyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 511 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 11/140 (7%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 +S G + P G L+ + +R + + G E+ P + LW SG + +Y +M Sbjct: 61 YSPGSPLFRPNGTHILNKLITFLRAQYKQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMY 120 Query: 95 RLADRNDKA--------MIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 + R D IYG P + +F+S SYR LP + R+E+ Sbjct: 121 EVGGRGDTGETSETSENEIYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVS 180 Query: 145 PRF-GVMRSREFLMKDAYSF 163 G+ R R F D + F Sbjct: 181 GSLSGLTRVRRFHQDDGHIF 200 >gi|320036438|gb|EFW18377.1| prolyl-tRNA synthetase [Coccidioides posadasii str. Silveira] Length = 603 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 43/88 (48%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 188 EKKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNPQPFLRTREFLWQEG 247 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ LT ++ ++ Y ++ +L Sbjct: 248 HTAHLTEAAAREEVLQILQHYAHVYEQL 275 >gi|163846883|ref|YP_001634927.1| prolyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222524704|ref|YP_002569175.1| prolyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] gi|259511578|sp|A9W9Q2|SYP_CHLAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|259511583|sp|B9LC55|SYP_CHLSY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|163668172|gb|ABY34538.1| prolyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222448583|gb|ACM52849.1| prolyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] Length = 480 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 10/148 (6%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 R ++ G G ++ TF + Y S+G+ + R++ A+I + D +G++ Sbjct: 223 RALQAGTSHNLGQNFARAFDITFTDQNNTIQYAWTTSWGV-STRLIGALIMTHSDDEGLV 281 Query: 340 WPDSVAPFKISLINIKAHDQ---VCRDACEKIYARLS---KVGCDVFWDDMGEQIGSQFA 393 P +AP ++ ++ I +D+ + A E++ A + D D G +F Sbjct: 282 LPPRLAPIQVVVVPIYKNDEERSLVMAAVEQMTAAWKGRLRFKVD---DRDNYSPGYKFN 338 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +L G P+++ VG K V+ V + R Sbjct: 339 EWELKGVPVRIEVGPKDVAKETVALARR 366 >gi|165975675|ref|YP_001651268.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149490|ref|YP_001968015.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251658|ref|ZP_07337831.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251749|ref|ZP_07533652.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307260677|ref|ZP_07542367.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262809|ref|ZP_07544434.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238687519|sp|B0BSM2|SYT_ACTPJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238692375|sp|B3H061|SYT_ACTP7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|165875776|gb|ABY68824.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914621|gb|ACE60873.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649500|gb|EFL79683.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860750|gb|EFM92760.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306869598|gb|EFN01385.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871824|gb|EFN03543.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 643 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 80/397 (20%), Positives = 142/397 (35%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW +G + +Y Sbjct: 256 MQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTRPENRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E D + + + ++ I E A Y + Sbjct: 432 ----AMWDRAE-------DGLAKALTANGLSYE-------IQEGEGAFYGPKIEFALRDC 473 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGAD-GKDHYVQMGSYGIGAMRV 324 D R + G I ++LP + A++ D G+ V + +G++ Sbjct: 474 LD----------REWQCGTI---QLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +I + G +P +AP + ++NI D +K+ LS G D Sbjct: 521 FIGIITEEYAG---FFPTWLAPTQAVVMNITDSQA---DYVQKVTKALSDAGIRAKSDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++G + L P ++ G K + KV ++ R Sbjct: 575 NEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRTR 611 >gi|324991702|gb|EGC23634.1| serine--tRNA ligase [Streptococcus sanguinis SK353] Length = 425 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S M + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELENMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|242033449|ref|XP_002464119.1| hypothetical protein SORBIDRAFT_01g012680 [Sorghum bicolor] gi|241917973|gb|EER91117.1| hypothetical protein SORBIDRAFT_01g012680 [Sorghum bicolor] Length = 739 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 2/132 (1%) Query: 33 HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE 92 H+ S G +LP G + + + +R++ G E+ P + + LW SG +Y KE Sbjct: 360 HELSPGSCFFLPHGARIYNKLMDFMRQQYRARGYQEVLSPNMYNMQLWETSGHAANY-KE 418 Query: 93 MLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 + + + + P + +F + ++SYR LP + R+EL G+ R Sbjct: 419 NMFVFEIEKQEFGLKPMNCPGHCLMFANRVRSYRELPLRMADFGVLHRNELSGALTGLTR 478 Query: 152 SREFLMKDAYSF 163 R F DA+ F Sbjct: 479 VRRFQQDDAHIF 490 >gi|315634189|ref|ZP_07889478.1| threonine--tRNA ligase [Aggregatibacter segnis ATCC 33393] gi|315477439|gb|EFU68182.1| threonine--tRNA ligase [Aggregatibacter segnis ATCC 33393] Length = 643 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +YG Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIRMVYDIYSTFGFTNIFVKLSTRPEKRIGAD 431 >gi|154274019|ref|XP_001537861.1| hypothetical protein HCAG_07283 [Ajellomyces capsulatus NAm1] gi|150415469|gb|EDN10822.1| hypothetical protein HCAG_07283 [Ajellomyces capsulatus NAm1] Length = 551 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 40/81 (49%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + I+S+R+LP Q R E + +R+REFL ++ ++ LT Sbjct: 171 PTSETVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEFKNPQPFLRTREFLWQEGHTAHLTE 230 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 G++ ++ Y ++ L Sbjct: 231 GGAREEVLQILEHYAHVYEEL 251 >gi|297835784|ref|XP_002885774.1| hypothetical protein ARALYDRAFT_319286 [Arabidopsis lyrata subsp. lyrata] gi|297331614|gb|EFH62033.1| hypothetical protein ARALYDRAFT_319286 [Arabidopsis lyrata subsp. lyrata] Length = 650 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 82/408 (20%), Positives = 150/408 (36%), Gaps = 52/408 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + ++ G + P + ADLW SG D Y + M Sbjct: 274 GLVFWHPKGAIVRNIIEESWKKMHVEHGYDLIYTPHVAKADLWKISGHLDFYRENMYDQM 333 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 + D+ P + +++ +SYR+LP ++ +R EL G+ R R F Sbjct: 334 EIEDELYQLRPMNCPYHILLYQRKRQSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFT 393 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ F L + K + I R G + + P +G D Sbjct: 394 QDDAHIFCLEDQ-IKDEIRGVLDLTEEILSRFGFNKYEVNLSTRPEKSVGDD-------- 444 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D E +D +D S D E A Y D+ K+ D+L Sbjct: 445 -DIWEKATCALRDALDDKGWSYEVD-----------EGGGAFYGPKIDL---KIEDALGR 489 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG---KDHYVQMGSYGIGAMRVVAAVIE 330 + S ++ ++LP D K + + +G++ V+ Sbjct: 490 KWQCSTIQVD----------FNLPQRFDITYVDTNSDKKRPIMIHRAVLGSLERFFGVLI 539 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKVGCDVFWDDM-GEQI 388 + G +W ++P ++ ++ + + + C++ +K+ A C V + GE++ Sbjct: 540 EHYAGDFPLW---LSPIQVRVLPVTDNQLEFCKEVSKKLRA------CGVRAELCHGERL 590 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A+ PL +VG K V V ++ R G + +++ IN Sbjct: 591 PKLIRNAETQKIPLMAVVGPKEVETGTVTVRSRFGGELGTIPVDDFIN 638 >gi|307256244|ref|ZP_07538030.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865263|gb|EFM97160.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 643 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 80/397 (20%), Positives = 142/397 (35%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW +G + +Y Sbjct: 256 MQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTRPENRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E D + + + ++ I E A Y + Sbjct: 432 ----AMWDRAE-------DGLAKALTANGLSYE-------IQEGEGAFYGPKIEFALRDC 473 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGAD-GKDHYVQMGSYGIGAMRV 324 D R + G I ++LP + A++ D G+ V + +G++ Sbjct: 474 LD----------REWQCGTI---QLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +I + G +P +AP + ++NI D +K+ LS G D Sbjct: 521 FIGIITEEYAG---FFPTWLAPTQAVVMNITDSQA---DYVQKVTKALSDAGIRAKSDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++G + L P ++ G K + KV ++ R Sbjct: 575 NEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRTR 611 >gi|327401820|ref|YP_004342659.1| threonyl-tRNA synthetase [Archaeoglobus veneficus SNP6] gi|327317328|gb|AEA47944.1| threonyl-tRNA synthetase [Archaeoglobus veneficus SNP6] Length = 615 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 68/330 (20%), Positives = 134/330 (40%), Gaps = 57/330 (17%) Query: 124 SYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +Y+NLP Y++ + FR E R G+ R R F M D ++ E +K + + Sbjct: 299 TYKNLPLRMYELTRYSFRKEQRGELVGLRRLRAFTMPDMHTLTKDMEQAKQEFFNQYKLS 358 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD- 240 + +GL+ + E + +KDF + EN +F Sbjct: 359 VETLKEIGLEP----------------------EDYEVAIRVTKDFYN-----ENKEFVH 391 Query: 241 ---DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D++ +VE W + D+L + +S I+V + +Y + Sbjct: 392 SLVDVLKKPILVEMWDQRFFYFVLKFEFNFVDALEKASALSTVQIDVEN----AERYDI- 446 Query: 298 MSATFKGADG-KDHYVQMGSYGIGAM-RVVAAVIESSH----DGKGIIWPDSVAPFKISL 351 T+ G K+H + GA+ R + A++E ++ GK + P ++P ++ + Sbjct: 447 ---TYVNEKGEKEHPFILHCSASGAIERCIYALLEKAYMEKEKGKLPMLPVWLSPTQVRI 503 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 I + + D ++ +++ V DV DD E +G + A + P +VG V Sbjct: 504 IPV---SEKYVDYAIEVAKKMNGVRVDV--DDRDETLGKKIRDASMEWIPYIAVVGENEV 558 Query: 412 SDSKVEIKHRLTGIRED-----MSLEEVIN 436 ++ + + R +++ MS+EE++ Sbjct: 559 NEGYLTVTIRSESTQKEQKRVKMSVEELVE 588 >gi|294892656|ref|XP_002774168.1| glycyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] gi|239879385|gb|EER05984.1| glycyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] Length = 674 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 11/115 (9%) Query: 316 SYGIGAMRVVAAVIESSHDGKG---------IIWPDSVAPFKISLINIKAHDQVCRDACE 366 ++G+G R++ ++E + + + P VAP K+S++ I ++ + A Sbjct: 520 AFGVG--RIIYTILEHTFRSREMEDQELRCYLSLPPVVAPTKVSVLPISSNPTQFKPAMH 577 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 KI L + G DD G+ IG ++A D +G P + + + ++D V ++ R Sbjct: 578 KITDALKEHGISYKVDDSGQAIGKRYARTDEIGIPFGITIDFQSLNDDTVTLRER 632 >gi|327541683|gb|EGF28207.1| prolyl-tRNA synthetase [Rhodopirellula baltica WH47] Length = 501 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 LR A + ++ +I PT E ++ + ++SYR+LP Q R E+R R +R+ Sbjct: 110 LRPAGKLEEPLIVRPTSETIIGATYAKWVQSYRDLPILINQWANVVRWEMRTRM-FLRTA 168 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 EFL ++ ++ T E + KM Y Sbjct: 169 EFLWQEGHTVHATSEEAVEETEKMVEVY 196 >gi|207343684|gb|EDZ71074.1| YKL194Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 358 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 16/158 (10%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQN-RTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 S G +LP G K + + ++ +Q + G E+ P + LW +SG +++Y +M Sbjct: 55 SPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMF 114 Query: 95 RLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 ++ +++ YG P + IF +SY LP F R+E G+ R Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTR 174 Query: 152 SREFLMKDAYSFDLTPEGSKHS-----------YNKMF 178 R+F D + F TP K YNK+F Sbjct: 175 LRKFHQDDGHIF-CTPSQVKSEIFNSLKLIDIVYNKIF 211 >gi|189205755|ref|XP_001939212.1| prolyl-tRNA synthetase 2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187975305|gb|EDU41931.1| prolyl-tRNA synthetase 2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 562 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E M F I+S+R+LP Q R E + +R+REFL ++ Sbjct: 147 EKPIAVRPTSETAMYPYFARKIQSHRDLPLKLNQWNSVVRWEFKHPMPFIRTREFLWQEG 206 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL-------GLKSI 193 ++ LT E + ++ Y +F +L G+K+I Sbjct: 207 HTAHLTREEASAEVLQILDWYSDVFQKLLAVPVVKGMKTI 246 >gi|296284112|ref|ZP_06862110.1| prolyl-tRNA synthetase [Citromicrobium bathyomarinum JL354] Length = 533 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ ++ PT E ++ D ++S+R+LP Q R E+R R +R+ EFL ++ Sbjct: 137 EEPLVVRPTSETIIGDAMARWVQSWRDLPLKLNQWANVVRWEMRTRM-FLRTSEFLWQEG 195 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ TPE +K M Y Sbjct: 196 HTAHATPEEAKDHTLTMLEVY 216 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/98 (19%), Positives = 47/98 (47%), Gaps = 4/98 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GT ++ ++ +G + + S+G+ + R++ +I + D G+ Sbjct: 255 GKALQAGTSHYLGTNFAKASGIKYQAQEGGEQFAHTTSWGV-STRLIGGIIMTHGDDDGL 313 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLS 373 P +AP+++ ++ + D + CE + A L+ Sbjct: 314 RVPPKLAPWQVVILPMLRGNDDDAALIEYCEGLRATLA 351 >gi|296089916|emb|CBI39735.3| unnamed protein product [Vitis vinifera] Length = 686 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H S G + +LP G + + + I+ + G E+ PT+ + LW SG +Y Sbjct: 305 FCHPLSPGSWFFLPHGGRIYNKLMEFIKAQYRERGYHEVFSPTMYNMQLWETSGHAANY- 363 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 KE + + + + P + +F ++SYR LP + R+E G+ Sbjct: 364 KENMFVFEVEKQEFGLKPMNCPGHCLMFEHRVRSYRELPLRLADFGVLHRNEASGALTGL 423 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 424 TRVRRFQQDDAHIF 437 >gi|322706591|gb|EFY98171.1| prolyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23] Length = 556 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 7/173 (4%) Query: 23 HKLMLRTGMIHQHSK--GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADL 79 +++L+ M+ + + G + PL + G E S P L L Sbjct: 62 QEVVLKAEMVEYYHEISGFFVLRPLSMHIWSTIRKWFSGHIEELGVEEASFPLFLSKTSL 121 Query: 80 WVESGRYDSYGKEMLRLADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 E D + E+ + DK + PT E VM + I+S+R+LP Q Sbjct: 122 DKEKDHVDGFAPELAWVERAGDKKLDVPVAIRPTSEAVMYPYYAKWIRSHRDLPLRLNQW 181 Query: 136 QLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 R E + +R+REFL ++ ++ LT E + ++ Y ++ +L Sbjct: 182 NSVVRWEAKQTTPFLRTREFLWQEGHTAHLTEELAGEEVLEILELYAGVYEQL 234 >gi|258578341|ref|XP_002543352.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704] gi|237903618|gb|EEP78019.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704] Length = 653 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 19/145 (13%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 +S G + P G L+ + A +R + + G E+ PT+ LW SG + +Y +M Sbjct: 201 YSPGSPLFQPNGTHILNKLLAFLRAQYRQYGFQEVLTPTIYKKSLWELSGHWQNYKDDMY 260 Query: 95 RLADRNDKAMIYGPTHEEVMTD---------------IFRSHIKSYRNLPFTFYQIQLKF 139 + R TH E+ D +F+S SYR+LP + Sbjct: 261 EVRGRGATGET---THGEIGEDESYGLKPMNCPGHCLLFKSQKWSYRDLPVRYADFSPLH 317 Query: 140 RDELRPRF-GVMRSREFLMKDAYSF 163 R+E+ G+ R R F D + F Sbjct: 318 RNEVSGSLSGLTRVRRFHQDDGHIF 342 >gi|288574387|ref|ZP_06392744.1| prolyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570128|gb|EFC91685.1| prolyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 480 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 7/157 (4%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLRL----AD 98 P G + + + TG + P L S+ L E+ + + E + + Sbjct: 39 PTGYSVWEEIQQVFDRAFKETGHVNAYFPVLIPSSFLEKEAEHVEGFSPECAVVTHAGGE 98 Query: 99 RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMK 158 ++ ++ PT E V+ ++ I+S+R+LP Q R E RPR +R+ EFL + Sbjct: 99 ELEEPLVVRPTSETVIGHMYSKWIQSWRDLPLLINQWANVMRWEKRPRL-FLRTSEFLWQ 157 Query: 159 DAYSFDLTPEGSKHSYNKMFVSYLRIF-HRLGLKSIP 194 + ++ + E + +M Y RI L L +P Sbjct: 158 EGHTAHASKEEAIEETERMLEVYRRIMTDYLALPVVP 194 Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust. Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 8/157 (5%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G +S + F+ Y S+G+ + R++ AVI + D G+I Sbjct: 220 KALQAGTSHFLGQNFSKAFNIQFQNKKEAMEYAWTTSWGV-STRLIGAVIMTHSDDDGLI 278 Query: 340 WPDSVAPFKISLINIKAHDQVCR----DACEKIYARLSKVGCD---VFWDDMGEQIGSQF 392 P +AP K++L+ I + + ++ ++ V D V D + G +F Sbjct: 279 LPPRIAPTKVALLPISKDETMATGPLLSKARELAGKIESVIGDRTIVVDDQFHMRPGDRF 338 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 G PL++ +G K V R TG + D+ Sbjct: 339 FYHLQKGVPLRLELGEKEFEKGTVRAVRRDTGEKIDL 375 >gi|121716703|ref|XP_001275886.1| prolyl-tRNA synthetase [Aspergillus clavatus NRRL 1] gi|119404043|gb|EAW14460.1| prolyl-tRNA synthetase [Aspergillus clavatus NRRL 1] Length = 608 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 42/88 (47%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 184 EKKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEG 243 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ LT ++ + Y RI+ L Sbjct: 244 HTAHLTEGAAREEVLHILDLYARIYEEL 271 >gi|332357990|gb|EGJ35823.1| serine--tRNA ligase [Streptococcus sanguinis SK1056] Length = 425 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + + +G+Y + ++ L+D N + PT E +T+ +R I + LP F + Sbjct: 200 NHNSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLTNYYRDEILDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALCTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|291402378|ref|XP_002717441.1| PREDICTED: glutamyl-prolyl tRNA synthetase [Oryctolagus cuniculus] Length = 1460 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 68/339 (20%), Positives = 124/339 (36%), Gaps = 77/339 (22%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + ++S+R+LP Q R E + +R+REFL ++ +S T Sbjct: 1068 PTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHPQPFLRTREFLWQEGHSAFATF 1127 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 E + ++ Y R++ L +IP +V E + F D+ Sbjct: 1128 EEAAEEVLQILDLYARVYEE--LLAIP----------------VVKGRKTEKEKFAGGDY 1169 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 T + IS S R I+ G Sbjct: 1170 --------TTTIEAFIS--------------------------------ASGRAIQGGTS 1189 Query: 288 FYFGTKYSLPMSATFK--GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 + G +S F+ G+ + S+G+ R + +I D G++ P VA Sbjct: 1190 HHLGQNFSKMCEIVFEDPKTPGEKQFAYQCSWGL-TTRTIGVMIMVHGDNMGLVLPPRVA 1248 Query: 346 PFKISLINIKAHDQV-----------CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 ++ +I + + C D C ++ + +V D+ D+ G +F Sbjct: 1249 SVQVVVIPCGITNALSEEDKEALIAKCNDYCRRLLSVSIRVRADLR-DNYSP--GWKFNH 1305 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +L G P+++ VG + + + + R TG E +++ E Sbjct: 1306 WELKGVPIRLEVGPRDMKNCQFVAVRRDTG--EKLTIAE 1342 >gi|253989346|ref|YP_003040702.1| threonyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780796|emb|CAQ83958.1| threonyl-tRNA synthetase [Photorhabdus asymbiotica] Length = 642 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 3/171 (1%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + +W +G +++Y + Sbjct: 256 MQEEAPGMAFWHNDGWTIFRELETFVRTKLKEYQYQEVKGPFMMDRVMWERTGHWENYNE 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + N + + P + IF +KSYR+LP + R+E G+M Sbjct: 316 HMFTTSSENREYCV-KPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 R R F DA+ F + + N + + Y ++ G + I ++ + P Sbjct: 375 RVRGFTQDDAHIFCTEEQIHREVSNCIKMVY-DVYSTFGFEKIVVKLSTRP 424 >gi|294101094|ref|YP_003552952.1| YbaK/prolyl-tRNA synthetase associated region [Aminobacterium colombiense DSM 12261] gi|293616074|gb|ADE56228.1| YbaK/prolyl-tRNA synthetase associated region [Aminobacterium colombiense DSM 12261] Length = 509 Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 +P +APF + +I D+ + +Y + G +DD E+ G++FA +L G Sbjct: 403 YPLGLAPFDVDIIVPSIKDETAMELATNLYHEMVHQGVVALFDDRNERAGAKFADFELFG 462 Query: 400 FPLQVIVGSKFVSDSKVEIKH 420 P +V+VG K ++ VE+++ Sbjct: 463 IPAKVVVGRK-AAEGIVEVQY 482 >gi|315043510|ref|XP_003171131.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311344920|gb|EFR04123.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 523 Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 8/137 (5%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 +S G + P G L+ + + +R + + G E+ P + LW SG + +Y +M Sbjct: 76 YSPGSPLFRPNGTHILNKLISFLRAQYRQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMY 135 Query: 95 RLADRNDKA-----MIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 + R D YG P + +F+S SYR LP + R+E+ Sbjct: 136 EVGGRGDTGDSTENETYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSL 195 Query: 148 -GVMRSREFLMKDAYSF 163 G+ R R F D + F Sbjct: 196 SGLTRVRRFHQDDGHIF 212 >gi|302499120|ref|XP_003011556.1| hypothetical protein ARB_02109 [Arthroderma benhamiae CBS 112371] gi|291175108|gb|EFE30916.1| hypothetical protein ARB_02109 [Arthroderma benhamiae CBS 112371] Length = 533 Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 11/131 (8%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA 103 P G L+ + +R + + G E+ P + LW SG + +Y +M + R D Sbjct: 92 PNGTHILNKLITFLRAQYKQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMYEVGGRGDTG 151 Query: 104 --------MIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 IYG P + +F+S SYR LP + R+E+ G+ R Sbjct: 152 EASETSENEIYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSLSGLTRV 211 Query: 153 REFLMKDAYSF 163 R F D + F Sbjct: 212 RRFHQDDGHIF 222 >gi|145534462|ref|XP_001452975.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420675|emb|CAK85578.1| unnamed protein product [Paramecium tetraurelia] Length = 1348 Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 9/138 (6%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + HQ S G + P G + + +R + G E+ P + +A LW SG YD Y Sbjct: 341 LFHQLSPGSAFFYPSGAHIYNTLMNFLRRQYYIRGYQEVISPNIFNAQLWKISGHYDKYK 400 Query: 91 KEM--LRLADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 + + + + + + + + P H +M D+ + SYR+LP F + R+E+ Sbjct: 401 ENLFFINMGEEGEYGLKPMNCPGH-CLMFDMIQH---SYRDLPVRFADFGVLHRNEVHGA 456 Query: 147 F-GVMRSREFLMKDAYSF 163 G+ R R F DA+ F Sbjct: 457 LSGLTRVRRFQQDDAHIF 474 >gi|315046950|ref|XP_003172850.1| bifunctional aminoacyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311343236|gb|EFR02439.1| bifunctional aminoacyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 604 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 42/88 (47%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 185 EKKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNPQPFLRTREFLWQEG 244 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ LT E + ++ Y ++ L Sbjct: 245 HTAHLTKEEAHEEVLQILQHYAHVYEEL 272 >gi|302653826|ref|XP_003018730.1| hypothetical protein TRV_07235 [Trichophyton verrucosum HKI 0517] gi|291182401|gb|EFE38085.1| hypothetical protein TRV_07235 [Trichophyton verrucosum HKI 0517] Length = 533 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 11/131 (8%) Query: 44 PLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA 103 P G L+ + +R + + G E+ P + LW SG + +Y +M + R D Sbjct: 92 PNGTHILNKLITFLRAQYKQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMYEVGGRGDTG 151 Query: 104 --------MIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRS 152 IYG P + +F+S SYR LP + R+E+ G+ R Sbjct: 152 ETSDTSENEIYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSLSGLTRV 211 Query: 153 REFLMKDAYSF 163 R F D + F Sbjct: 212 RRFHQDDGHIF 222 >gi|145511255|ref|XP_001441555.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408805|emb|CAK74158.1| unnamed protein product [Paramecium tetraurelia] Length = 937 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 9/138 (6%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + HQ S G + P G + + +R + G E+ P + +A LW SG YD Y Sbjct: 342 LFHQLSPGSAFFYPSGAHIYNTLMNFLRRQYYIRGYQEVISPNIFNAQLWKISGHYDKYK 401 Query: 91 KEM--LRLADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 + + + + + + + + P H +M D+ + SYR+LP F + R+E+ Sbjct: 402 ENLFFINMGEEGEYGLKPMNCPGH-CLMFDMVQH---SYRDLPIRFADFGVLHRNEVHGA 457 Query: 147 F-GVMRSREFLMKDAYSF 163 G+ R R F DA+ F Sbjct: 458 LTGLTRVRRFQQDDAHIF 475 >gi|83319726|ref|YP_424209.1| threonyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283612|gb|ABC01544.1| threonyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 639 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 81/423 (19%), Positives = 178/423 (42%), Gaps = 54/423 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL- 96 G+ WLP G + + +R+++ I + P + + +L+ SG +D YG++M + Sbjct: 257 GLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIGTVELYKTSGHWDHYGEDMFQPF 316 Query: 97 --ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSR 153 +D+ I P + +++ +SYR+LP + ++ R E G+ R R Sbjct: 317 NGGKGSDEQFILRPMNCPHHIAVYKQEQRSYRDLPLRICEHAIQHRFESSGSLTGLERVR 376 Query: 154 EFLMKDAYSF---DLTPEGSKHSYNKMFVSYLRIFH-RLGLKSIPMRAESGPIGGDLSHE 209 + D++ F D + + +Y K+ L+ F+ ++ S+ +R + + ++ Sbjct: 377 GMKLTDSHIFVRSDQIEDEFRSTY-KLISEVLKTFNIQIDYLSLSLRDPNDKVK---FYK 432 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 ++ D E+ + K +D + E D A Y D+ + Sbjct: 433 DDLMWDKAESSL--EKVLIDLGLKYEKRIGD------------AAFYGPKLDIQIKT--- 475 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK------DHYVQMGSYGIGAMR 323 +N ++ I++ F K+ L T+ D K H +G+Y R Sbjct: 476 --AQNHEITVSTIQLD--FLMPNKFDL----TYIDKDQKLVRPIMIHRGLIGTYE----R 523 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 +A ++E + KG++ P +AP ++ +I I + + I+ +L K D Sbjct: 524 FIATLLEQT---KGVL-PLWLAPKQVEIIPISESN---LEYANLIHQKLKKEFIRSHIDL 576 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E++ + A P Q+++G+K V ++ + + + + +S++E I+ + + Sbjct: 577 RDERLSYKIRDAQTKKVPYQLVLGNKEVENNTITYRQYGSDAQITVSIQEFIDMLKQQIN 636 Query: 444 NNR 446 + + Sbjct: 637 DKK 639 >gi|302916831|ref|XP_003052226.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256733165|gb|EEU46513.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 663 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 15/180 (8%) Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY-- 311 A ATS E+L L E +S VG K S+ + + + ++ Sbjct: 440 AALNATSQEQREQLAKELSETGSISIEVAGVGDGKAKIGKESIAIEFRKRVENTREFVPN 499 Query: 312 VQMGSYGIGAMRVVAAVIESS---------HDGKGII-WPDSVAPFKISLINIKAHDQVC 361 V S+GIG R++ +++E S + +G++ +P +VAP K+ L+ + ++ Q Sbjct: 500 VIEPSFGIG--RILYSLMEHSFWTRASDGGDEARGVLSFPPTVAPTKVLLVPLSSNPQF- 556 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +++ RL G DD IG +++ D LG PL + + + V D V ++ R Sbjct: 557 KPLLKQLSQRLRTAGISSRVDDSSASIGKRYSRNDELGTPLGITIDFQTVQDGTVTLRDR 616 Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 26/47 (55%) Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 +PF I +R+E+ PR G++R REFLM + F G KHS Sbjct: 239 QMPFASASIGKSYRNEISPRAGLLRVREFLMAEIEHFVDPQGGKKHS 285 >gi|303313271|ref|XP_003066647.1| prolyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240106309|gb|EER24502.1| prolyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 603 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 43/88 (48%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 +K + PT E VM + I+S+R+LP Q R E + +R+REFL ++ Sbjct: 188 EKKIAIRPTSETVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEFKNPQPFLRTREFLWQEG 247 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ LT ++ ++ Y ++ +L Sbjct: 248 HTAHLTEAAAREEVLQILQHYAHVYEQL 275 >gi|219851588|ref|YP_002466020.1| prolyl-tRNA synthetase [Methanosphaerula palustris E1-9c] gi|219545847|gb|ACL16297.1| prolyl-tRNA synthetase [Methanosphaerula palustris E1-9c] Length = 479 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 76/388 (19%), Positives = 150/388 (38%), Gaps = 70/388 (18%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL 96 KG+Y W P G AI+R+ ++ + + + E+ + +E+ + Sbjct: 37 KGVYVWFPFGFSIRKLTYAILRQLLDKDHQETLFPLLIPEQEFMKEAEHIKGFEEEVYWV 96 Query: 97 ADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 D + PT E + ++ ++S+ +LP YQI FR E + ++R Sbjct: 97 THGGLTELDVKLALRPTSETAIYPMYALWVRSHADLPLKLYQIVNTFRYETKHTRPLIRL 156 Query: 153 REFL-MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 RE K+A++ T + + Y + L +P+ P Sbjct: 157 REITSFKEAHTVHATWDEAAAQVEDALALYTTFYQHL---CVPILISRRP---------- 203 Query: 212 VLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 ++ FP D ++++++ + Sbjct: 204 --------------EWDKFP------GADYTMAVDTV----------------------M 221 Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P+ K + ++G + + G +S T++ +G+ YGI + R +AA+I Sbjct: 222 PDGKTL-----QIGTVHHLGDHFSRTFDITYENQNGEQQLAYQTCYGI-SERCIAALISM 275 Query: 332 SHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 D KG+I P VAP ++ ++ I K D+V A I +L G V D+ + Sbjct: 276 HGDDKGLILPPEVAPVQVVVVPIIVGKRRDEVLA-AARTIRDQLEAAGLRVKLDEREIRP 334 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKV 416 G+++ ++ G PL+V +G + + + V Sbjct: 335 GAKYYHWEMRGVPLRVELGPRDLDNGVV 362 >gi|291320191|ref|YP_003515452.1| glycyl tRNA synthetase [Mycoplasma agalactiae] gi|290752523|emb|CBH40495.1| Glycyl tRNA synthetase (Glycine tRNA ligase) [Mycoplasma agalactiae] Length = 458 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 25/102 (24%), Positives = 54/102 (52%), Gaps = 4/102 (3%) Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P++VAP+K +++ + + E+IY +L K+ + +DD G IG ++ D +G Sbjct: 360 PNAVAPYKFAILPLVKK---LNEKAEEIYKQLLKLNIPITYDDAG-SIGKRYRRQDSIGT 415 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 P + + ++D + I++R + +E +S+ + +A F Sbjct: 416 PYCITIDYDSLNDECITIRNRDSMSQERISISSLYEFAQKTF 457 >gi|269956954|ref|YP_003326743.1| glycyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269305635|gb|ACZ31185.1| glycyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] Length = 466 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 70/318 (22%), Positives = 121/318 (38%), Gaps = 47/318 (14%) Query: 129 PFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR- 187 PF QI FR+E+ P + R+REF + F + P G+ +++ ++ ++ Sbjct: 189 PFGIAQIGKSFRNEITPGNFIFRTREFEQME-MEFFVKP-GTDAEWHQYWIDQRTAWYTD 246 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 LG+ +R P LSH D F ++ + + TDFD L + Sbjct: 247 LGIDPENLRHYEHP-AEKLSHYSTRTVDIEYRFGFQGSEWGELEGIANRTDFD----LKT 301 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 E V NEK F + E A G+ + + Y + KG Sbjct: 302 HTEHSGKDLGYRDPVTNEKYFPYVIE----PAAGLTRSLMAFLVEAYDEDEAPNTKGGVD 357 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 K + + +AP K +++ + + A EK Sbjct: 358 KRTVLHLDP--------------------------RLAPVKAAVLPLSKSTDLLPTA-EK 390 Query: 368 IYARLSKVGCDVFWD---DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + A L + W+ D+ + IG ++ D +G P V V + D V I+HR T Sbjct: 391 LAAELRQ-----HWNVDYDVTQAIGKRYRRQDEIGTPFCVTVDFDTLDDQAVTIRHRDTM 445 Query: 425 IREDMSLEEVINYASHRF 442 +E ++L++V +Y + R Sbjct: 446 AQERVALDQVASYLAARL 463 >gi|307249432|ref|ZP_07531421.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858506|gb|EFM90573.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 643 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 80/397 (20%), Positives = 142/397 (35%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW +G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTRPENRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E D + + + ++ I E A Y + Sbjct: 432 ----AMWDRAE-------DGLAKALTANGLSYE-------IQEGEGAFYGPKIEFALRDC 473 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGAD-GKDHYVQMGSYGIGAMRV 324 D R + G I ++LP + A++ D G+ V + +G++ Sbjct: 474 LD----------REWQCGTI---QLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +I + G +P +AP + ++NI D +K+ LS G D Sbjct: 521 FIGIITEEYAG---FFPTWLAPTQAVVMNITDSQA---DYVQKVTKALSDAGIRAKSDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++G + L P ++ G K + KV ++ R Sbjct: 575 NEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRTR 611 >gi|154311325|ref|XP_001554992.1| hypothetical protein BC1G_06515 [Botryotinia fuckeliana B05.10] gi|150850912|gb|EDN26105.1| hypothetical protein BC1G_06515 [Botryotinia fuckeliana B05.10] Length = 665 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 62/116 (53%), Gaps = 13/116 (11%) Query: 316 SYGIGAMRVVAAVIESSH---------DGKGII-WPDSVAPFKISLINIKAHDQVCRDAC 365 S+GIG R++ A++E ++ + +G++ +P VAP K+ L+ + +H+ + Sbjct: 506 SFGIG--RILYALMEHNYWTRGSEGGDEARGVLSFPPIVAPTKVLLVPLSSHESF-KPFL 562 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++I +L +G DD IG +++ D LG PL + V + V+DS ++ R Sbjct: 563 KQISYKLRSMGVSSRIDDSSASIGKRYSRNDELGTPLGITVDFQSVNDSTFTLRDR 618 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171 + +PF I +R+E+ PR G++R REFLM + F + PEG K Sbjct: 240 QQMPFASASIGKSYRNEISPRGGLLRVREFLMAEIEHF-VDPEGGK 284 >gi|326533164|dbj|BAJ93554.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 711 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 96/453 (21%), Positives = 182/453 (40%), Gaps = 59/453 (13%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMI---HQHSKGIYSWLPLGQKALDNVNAIIR 58 +R K +L +++E A+ H+L+ ++ + H S G +LP G + + +R Sbjct: 302 KRLKEYLHMIEE----AKKRDHRLLGQSQELFFFHPLSPGSCFFLPNGAIIYNKLMDFLR 357 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E G E+ P + + LW SG +Y M + + + P + +F Sbjct: 358 KEYRERGYREVLSPNIYNMQLWETSGHAANYKDNMF-VFEIEKQEFGLKPMNCPGHCLMF 416 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP + R+EL G+ R R F DA+ F T K Sbjct: 417 GHKVRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIF-CTESQIKDEVGAC 475 Query: 178 --FVSYL-RIF---HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 F+ Y+ +IF + L L + P + GD I + E Q+ ++ +F Sbjct: 476 LEFIDYVYKIFGFQYELELSTRPEK-----YLGD-----IETWNKAEQQL--TEALNEFG 523 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 P + + D A Y D+ +FD+L + + ++ F Sbjct: 524 KPWKINEADG------------AFYGPKIDI---GVFDALKRKFQCATLQLDFQLPLRFK 568 Query: 292 TKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 YS A + V + +G++ + A++ ++GK WP ++P + + Sbjct: 569 LTYSAEDEAKL------ERPVMIHRAILGSVERMFAILLEHYNGK---WPLWLSPRQAIV 619 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + ++ ++++A++ G V D I + A L F ++VG+K Sbjct: 620 CCVSSNSLA---YAKEVHAQIHAAGFHVDIDMTDRTIQKKVREAQLAQFNYILVVGAKEA 676 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 KV ++ R + D+S E + + + RFS+ Sbjct: 677 ESGKVVLRVR---DKADLSTESIADVIA-RFSD 705 >gi|67523387|ref|XP_659754.1| hypothetical protein AN2150.2 [Aspergillus nidulans FGSC A4] gi|40745038|gb|EAA64194.1| hypothetical protein AN2150.2 [Aspergillus nidulans FGSC A4] gi|259487529|tpe|CBF86275.1| TPA: prolyl-tRNA synthetase (AFU_orthologue; AFUA_2G16010) [Aspergillus nidulans FGSC A4] Length = 594 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 5/156 (3%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-LWVESGRYDSYGKEMLRL 96 G Y P + + + + G S P S D L E + + E+ + Sbjct: 111 GCYILKPASYSIWEEIQQWFNQRIKKIGVKNCSFPLFVSEDVLQREKDHIEGFAAEVAWV 170 Query: 97 ADRN----DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 +K + PT E VM + I+S+R+LP Q R E + +R+ Sbjct: 171 THAGSTPLEKKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHPQPFLRT 230 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 REFL ++ ++ LT E + + Y +I+ L Sbjct: 231 REFLWQEGHTAHLTKEAAHEEVMYILDLYAQIYEEL 266 >gi|240277283|gb|EER40792.1| glycyl-tRNA synthetase [Ajellomyces capsulatus H143] Length = 656 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 10/126 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++A ++E + + +G++ +P VAP K+ L+ + H + ++ Sbjct: 504 SFGIG--RILACLMEHVYWSRPDDEARGVLSFPPIVAPTKVLLVPLSNHPSF-QPLIHRL 560 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L ++G DD IG ++A D LG P + V + V D+ ++ R T + Sbjct: 561 TLKLRRLGVSNKVDDSSASIGKRYARNDELGTPFGITVDFQSVKDNTFTLRERDTTKQVR 620 Query: 429 MSLEEV 434 S EE+ Sbjct: 621 ASEEEI 626 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK-----HSYNKMFVS 180 +++PF I FR+E+ PR G++R REFLM + F + PEG K H + +S Sbjct: 238 QSMPFASASIGKSFRNEISPRSGLLRVREFLMAEIEHF-VDPEGGKKHPRFHEVQDLELS 296 Query: 181 YL 182 +L Sbjct: 297 FL 298 >gi|237736526|ref|ZP_04567007.1| threonyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] gi|229421568|gb|EEO36615.1| threonyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] Length = 638 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 10/171 (5%) Query: 2 RRSKYFLPILQENPRDAEIASHKLM---LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 ++ K +L +L+E AE H+ + L + ++ G +LP G + + + + Sbjct: 226 KKLKDYLTLLEE----AEKRDHRKLGKELDLFFVSEYGPGFPIFLPKGMAIRNTLINLWK 281 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 E G E+ P + + +LW SG + +Y +E + + ++ P + + Sbjct: 282 REHTLAGYTEIMTPIMLNKELWETSGHWYNY-RENMYTSTIDETEFAIKPMNCPGGIIAY 340 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 + + SY++LP ++ R E G+MR R F DA+ F +TPE Sbjct: 341 KYQLHSYKDLPIRCGELGTVHRHEFSGALHGLMRVRCFTQDDAHIF-MTPE 390 Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust. Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 23/165 (13%) Query: 284 VGHIFYFGT---KYSLP--MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKG 337 +G + GT ++LP ++ G DG+ H V + G++ ++ + G Sbjct: 473 IGRTWQCGTIQLDFNLPERFDISYIGEDGEKHRPVMIHRVVYGSIERFIGILIEHYAGAF 532 Query: 338 IIWPDSVAPFKISLINIKAH-----DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 +W +AP ++ ++ I +++CR E+ G DD E IG + Sbjct: 533 PLW---LAPTQVKVLTINDETKPYAEEICRTLLER--------GIRAELDDRAESIGYKI 581 Query: 393 AVAD-LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 A+ P+Q+I+G V + +V I+ R + + M L+E ++ Sbjct: 582 REANGKYKVPVQLIIGKNEVENREVNIRRRGSQEQTSMKLDEFLD 626 >gi|32473557|ref|NP_866551.1| prolyl-tRNA synthetase [Rhodopirellula baltica SH 1] gi|81658286|sp|Q7UGJ7|SYP_RHOBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|32398237|emb|CAD78332.1| prolyl tRNA synthetase [Rhodopirellula baltica SH 1] Length = 506 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Query: 94 LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSR 153 LR A + ++ +I PT E ++ + ++SYR+LP Q R E+R R +R+ Sbjct: 115 LRPAGKLEEPLIVRPTSETIIGATYAKWVQSYRDLPILINQWANVVRWEMRTRM-FLRTA 173 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 EFL ++ ++ T E + KM Y Sbjct: 174 EFLWQEGHTVHATSEEAVEETEKMVEVY 201 >gi|295664016|ref|XP_002792560.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] gi|226278674|gb|EEH34240.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] Length = 559 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 13/142 (9%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 +S G +LP G L+ + + +R + + G E+ P++ LW SG + +Y +M Sbjct: 90 YSPGSPLFLPNGTHILNKLTSFLRAQYAQYGFREVLTPSIYKKSLWEVSGHWQNYKDDMY 149 Query: 95 RLADRN------------DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 + R D++ P + +F+S SYR LP + R+E Sbjct: 150 EVRGRGASGETAEGEIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNE 209 Query: 143 LRPRF-GVMRSREFLMKDAYSF 163 + G+ R R F D + F Sbjct: 210 ISGSLSGLTRVRRFHQDDGHIF 231 >gi|325091800|gb|EGC45110.1| glycyl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 656 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 10/126 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++A ++E + + +G++ +P VAP K+ L+ + H + ++ Sbjct: 504 SFGIG--RILACLMEHVYWSRPDDEARGVLSFPPIVAPTKVLLVPLSNHPSF-QPLIHRL 560 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L ++G DD IG ++A D LG P + V + V D+ ++ R T + Sbjct: 561 TLKLRRLGVSNKVDDSSASIGKRYARNDELGTPFGITVDFQSVKDNTFTLRERDTTKQVR 620 Query: 429 MSLEEV 434 S EE+ Sbjct: 621 ASEEEI 626 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK-----HSYNKMFVS 180 +++PF I FR+E+ PR G++R REFLM + F + PEG K H + +S Sbjct: 238 QSMPFASASIGKSFRNEISPRSGLLRVREFLMAEIEHF-VDPEGGKKHPRFHEVQDLELS 296 Query: 181 YL 182 +L Sbjct: 297 FL 298 >gi|87303299|ref|ZP_01086092.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. WH 5701] gi|87282194|gb|EAQ74155.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. WH 5701] Length = 603 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 83/397 (20%), Positives = 150/397 (37%), Gaps = 53/397 (13%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + R+ G + P + LW SG D Y + M Sbjct: 216 GLVFWHPRGARMRLLIEDFWRQAHFAAGYDLLYTPHVADLSLWKTSGHLDFYSESMFGPM 275 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF--GVMRSREF 155 +++ P + + S ++SYR LP + ++ +R E RP G+MR R F Sbjct: 276 QVDERQYQLKPMNCPFHVLTYASTLRSYRELPIRWAELGTVYRYE-RPGVMHGLMRVRGF 334 Query: 156 LMKDAYSFDLTPE-------GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 DA+ F L PE G + + S+ + + L + P ++ IG D Sbjct: 335 TQDDAHIFCL-PEQIGDEILGVLNLTETILSSFDFHTYEVNLSTRPEKS----IGDD--- 386 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + D T + + D +P I E A Y D+ K+ Sbjct: 387 ---AVWDLATTGLIEALDRKGWPY--------------KIDEGGGAFYGPKIDI---KIE 426 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 D++ + S ++ F ++ L + ADG M I G++ Sbjct: 427 DAIGRMWQCSTIQLD----FNLPERFDL----HYVAADGSRQRPIMIHRAIFGSLERFFG 478 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ ++ G W +AP ++ L+ + D+V A E++ +L G D G++ Sbjct: 479 IMVENYAGDFPFW---LAPEQVRLLPVT--DEVIPYA-EEVLGQLRSAGVRAAIDRSGDR 532 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +G + P+ ++G+K V ++ R G Sbjct: 533 LGKLIRHGEQQKIPVLAVIGAKEAEQGSVSLRSRRDG 569 >gi|225677700|gb|EEH15984.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03] Length = 559 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 13/142 (9%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 +S G +LP G L+ + + +R + + G E+ P++ LW SG + +Y +M Sbjct: 90 YSPGSPLFLPNGTHILNKLTSFLRAQYAQYGFREVLTPSIYKKSLWEVSGHWQNYKDDMY 149 Query: 95 RLADRN------------DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 + R D++ P + +F+S SYR LP + R+E Sbjct: 150 EVRGRGASGETAKGEIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNE 209 Query: 143 LRPRF-GVMRSREFLMKDAYSF 163 + G+ R R F D + F Sbjct: 210 ISGSLSGLTRVRRFHQDDGHIF 231 >gi|225562196|gb|EEH10476.1| glycyl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 656 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 10/126 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++A ++E + + +G++ +P VAP K+ L+ + H + ++ Sbjct: 504 SFGIG--RILACLMEHVYWSRPDDEARGVLSFPPIVAPTKVLLVPLSNHPSF-QPLIHRL 560 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L ++G DD IG ++A D LG P + V + V D+ ++ R T + Sbjct: 561 TLKLRRLGVSNKVDDSSASIGKRYARNDELGTPFGITVDFQSVKDNTFTLRERDTTKQVR 620 Query: 429 MSLEEV 434 S EE+ Sbjct: 621 ASEEEI 626 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK-----HSYNKMFVS 180 +++PF I FR+E+ PR G++R REFLM + F + PEG K H + +S Sbjct: 238 QSMPFASASIGKSFRNEISPRSGLLRVREFLMAEIEHF-VDPEGGKKHPRFHEVQDLELS 296 Query: 181 YL 182 +L Sbjct: 297 FL 298 >gi|154284101|ref|XP_001542846.1| glycyl-tRNA synthetase 1 [Ajellomyces capsulatus NAm1] gi|150411026|gb|EDN06414.1| glycyl-tRNA synthetase 1 [Ajellomyces capsulatus NAm1] Length = 582 Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 10/126 (7%) Query: 316 SYGIGAMRVVAAVIE------SSHDGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++A ++E + + +G++ +P VAP K+ L+ + H + ++ Sbjct: 430 SFGIG--RILACLMEHVYWSRPNDEARGVLSFPPIVAPTKVLLVPLSNHPSF-QPLIHRL 486 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L ++G DD IG ++A D LG P + V + V D+ ++ R T + Sbjct: 487 TLKLRRLGVSNKVDDSSASIGKRYARNDELGTPFGITVDFQSVKDNTFTLRERDTTKQVR 546 Query: 429 MSLEEV 434 S EE+ Sbjct: 547 ASEEEI 552 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 6/64 (9%) Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK-----HSYNKMF 178 + +++PF I FR+E+ PR G++R REFLM + F + PEG K H + Sbjct: 162 NQQSMPFASASIGKSFRNEISPRSGLLRVREFLMAEIEHF-VDPEGGKKHPRFHEVQDLE 220 Query: 179 VSYL 182 +S+L Sbjct: 221 LSFL 224 >gi|226295138|gb|EEH50558.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18] Length = 559 Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 13/142 (9%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 +S G +LP G L+ + + +R + + G E+ P++ LW SG + +Y +M Sbjct: 90 YSPGSPLFLPNGTHILNKLTSFLRAQYAQYGFREVLTPSIYKKSLWEVSGHWQNYKDDMY 149 Query: 95 RLADRN------------DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 + R D++ P + +F+S SYR LP + R+E Sbjct: 150 EVRGRGASGETAKGEIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNE 209 Query: 143 LRPRF-GVMRSREFLMKDAYSF 163 + G+ R R F D + F Sbjct: 210 ISGSLSGLTRVRRFHQDDGHIF 231 >gi|145529349|ref|XP_001450463.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124418074|emb|CAK83066.1| unnamed protein product [Paramecium tetraurelia] Length = 930 Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 9/138 (6%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + HQ S G + P G + + +R + G E+ P + +A LW SG YD Y Sbjct: 341 LFHQLSPGSAFFYPSGAHIYNTLMNFLRRQYYIRGYQEVISPNIFNAQLWKISGHYDKYK 400 Query: 91 KEM--LRLADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 + + + + + + + + P H +M D+ + SYR+LP F + R+E+ Sbjct: 401 ENLFFINMGEEGEYGLKPMNCPGH-CLMFDMIQH---SYRDLPVRFADFGVLHRNEVHGA 456 Query: 147 F-GVMRSREFLMKDAYSF 163 G+ R R F DA+ F Sbjct: 457 LSGLTRVRRFQQDDAHIF 474 >gi|19074055|ref|NP_584661.1| PROLYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1] gi|74621295|sp|Q8SSD7|SYP_ENCCU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|19068697|emb|CAD25165.1| PROLYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1] Length = 520 Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 5/157 (3%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL-QSADLWVESGRYDSYGKEMLR 95 KG Y PLGQ ++ ++ G E P L + L +E +++ E+ Sbjct: 55 KGCYVMRPLGQFVWKCIHKWFTKKIEELGVQECYFPMLVPKSMLEMEKDHVENFSPEVAW 114 Query: 96 LADRNDKAM----IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMR 151 + ++ + PT E ++ F I+S+R+LP Q R EL +R Sbjct: 115 ITKCGNQVLEDPVAVRPTSETIIYPSFSKWIRSHRDLPLKLNQWCSVLRWELHGTLPFIR 174 Query: 152 SREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 +EFL ++ ++ LT + S + Y +I+ L Sbjct: 175 GKEFLWQEGHTAFLTRKESDEEVLAILDLYSQIYSEL 211 >gi|290985788|ref|XP_002675607.1| Glycyl-tRNA synthetase [Naegleria gruberi] gi|284089204|gb|EFC42863.1| Glycyl-tRNA synthetase [Naegleria gruberi] Length = 650 Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 5/82 (6%) Query: 341 PDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 P ++AP+K++L+ IKA DQ+ + K+ L++ G D + IG ++A AD +G Sbjct: 522 PPAIAPYKVALLPIKADQDQIVK----KLQQSLARYGISHRVDAGNQNIGKKYARADDIG 577 Query: 400 FPLQVIVGSKFVSDSKVEIKHR 421 P + + V+ V I+ R Sbjct: 578 IPFAITIDDNSVTAGTVTIRER 599 Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 + +PF QI FR+E+ PR G++R REF + + F L P+ +H Sbjct: 221 KQMPFASAQIGQAFRNEISPRSGLLRVREFTLAEIEHF-LNPDVDEH 266 >gi|326936120|ref|XP_003214106.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like, partial [Meleagris gallopavo] Length = 550 Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust. Identities = 91/408 (22%), Positives = 142/408 (34%), Gaps = 61/408 (14%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 H S G +LP G + + IR E G E+ P + S LW SG + Y Sbjct: 184 FHALSPGSCFFLPRGAHIYNTLIDFIRSEYQARGFSEVVTPNIFSPRLWELSGHWQHYSA 243 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M + + P + +F +S+R LP + R+E G+ Sbjct: 244 HMFSFTA-GTETLSLKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRNEPPGSLTGLT 302 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG--GDLSH 208 R R F DA+ F E + I+ LG S M + P G GD + Sbjct: 303 RVRRFQQDDAHIF-CALEQLEAEIGACLDFVRSIYATLGF-SFQMALATRPDGFLGDAA- 359 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 D E Q+ K DF P E + D A Y D+ ++ Sbjct: 360 ----TWDRAEQQL--EKSLQDFGEPWELSQGDG------------AFYGPKIDI---RIQ 398 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 D+L + + ++ FG +Y+ A G V + +G++ + AV Sbjct: 399 DALGRHHQCGTIQLDFQMPERFGLEYA-------SAAGGTARPVLIHRAVLGSVERMVAV 451 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + S GK W SV H + RD + A L D G + Sbjct: 452 MAESCGGK---WGTSV------------HAMLRRDG---VMADLDA--------DAGATL 485 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G + A L + Q++VG + V ++ R + SL +V+ Sbjct: 486 GRKIRRAQLTHYNFQLVVGRREQEHGTVSVRTRDNRQLGEHSLGQVLQ 533 >gi|302803187|ref|XP_002983347.1| hypothetical protein SELMODRAFT_118068 [Selaginella moellendorffii] gi|300149032|gb|EFJ15689.1| hypothetical protein SELMODRAFT_118068 [Selaginella moellendorffii] Length = 495 Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 39/81 (48%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM IF I+ +R+LPF Q R E + +RSREFL ++ ++ T Sbjct: 135 PTSETVMYPIFAKRIRGHRDLPFKINQWCNVVRWEFKHPTPFIRSREFLWQEGHTAYATK 194 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 E + + Y R++ L Sbjct: 195 EEADEEVYAVLDLYRRVYEEL 215 Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust. Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 16/164 (9%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 ++ RGI+ G ++ F+ + V S+G+ R + +I D K Sbjct: 246 LTGRGIQGATSHCLGQNFAEMFDIVFEDEKRERKKVWQNSWGL-TTRTIGVMIMVHGDDK 304 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVA 395 P+K Q DA +L G V D G +++ Sbjct: 305 --------VPYK------DVDTQKLFDAAASTARQLKAAGLRVKEDTRDNYSPGWKYSNW 350 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 +L G PL+V +G + +++S+V + R TG +ED+ ++++++ S Sbjct: 351 ELKGVPLRVEIGPRDLANSQVRVVRRDTGAKEDVPMDKIVDRIS 394 >gi|106364390|dbj|BAE95216.1| predicted threonyl-tRNA synthetase [unclutured Candidatus Nitrosocaldus sp.] Length = 685 Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust. Identities = 76/368 (20%), Positives = 132/368 (35%), Gaps = 91/368 (24%) Query: 124 SYRNLPFTFYQI-QLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP Y++ + FR E G+ R R F M D ++ E +K K Sbjct: 322 SYKHLPLKIYELTRYSFRREKSGELVGLRRLRAFTMPDCHALCRDIEQAKQEMLKRLELS 381 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 ++ LG I L D E + + DF + EN F Sbjct: 382 KQVIEGLG---------------------ISLMDDVEVAIRVTSDFYN-----ENRGFIA 415 Query: 240 --DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I ++E+W+ + D+L + +S I+V + G +Y + Sbjct: 416 ELVRRIGKPVLLEEWSERFFYFVLKWEFNFVDNLAKASALSTDQIDVEN----GARYGI- 470 Query: 298 MSATFKGADG--KDHYVQMGSYGIGAMRVVAAVIESSH----DGKGIIWPDSVAPFKISL 351 F DG K+ + S RV+ A++E ++ +GK + P ++P ++ L Sbjct: 471 ---YFVDEDGSRKNPIILHNSPSGAVERVMYALLEKAYRMQKEGKTPMLPLWLSPTQVRL 527 Query: 352 INIKAHDQV---------------------------------------------CRDACE 366 I + V D C Sbjct: 528 IPVSTRGAVKGSSSSSNNNNKDDGDGGRSGESSMGVEANSNSSSNSSNNVSSITYLDYCN 587 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 I RL + V DD E +G + A++ P V+VG K ++ ++ ++ R +G Sbjct: 588 SIMHRLERSSIRVDIDDRDESVGKRIREAEMEWIPYIVVVGEKEIASDRLSVRDRASGKV 647 Query: 427 EDMSLEEV 434 +MS+EE+ Sbjct: 648 REMSVEEL 655 >gi|240949517|ref|ZP_04753857.1| threonyl-tRNA synthetase [Actinobacillus minor NM305] gi|240296090|gb|EER46751.1| threonyl-tRNA synthetase [Actinobacillus minor NM305] Length = 643 Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW +G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E + I+ G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIESEVTSCIKMVYDIYSTFGFENIAVKLSTRPENRIGDD 431 >gi|18313224|ref|NP_559891.1| glycyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2] gi|18160741|gb|AAL64073.1| glycyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2] Length = 586 Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 8/125 (6%) Query: 320 GAMRVVAAVIESS---HDGKGII-WPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSK 374 G R++ V+ES+ +G+ + P +AP K ++ I K D V + ++ L++ Sbjct: 444 GLDRIMYVVLESAVVEEEGRVYLRLPPDIAPVKACILPIVKRADYV--EIGRTLWRSLAR 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V ++D G IGS++A D +G PL V + K D V I+ R T + + L +V Sbjct: 502 QGFVVLYEDEG-TIGSRYASCDEIGTPLAVTIDEKTPVDGTVTIRDRDTKRQVRVKLGDV 560 Query: 435 INYAS 439 + + S Sbjct: 561 VTFVS 565 >gi|257464982|ref|ZP_05629353.1| threonyl-tRNA synthetase [Actinobacillus minor 202] gi|257450642|gb|EEV24685.1| threonyl-tRNA synthetase [Actinobacillus minor 202] Length = 643 Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW +G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E + I+ G ++I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIESEVTSCIKMVYDIYSTFGFENIAVKLSTRPENRIGDD 431 >gi|255730209|ref|XP_002550029.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240131986|gb|EER31544.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 455 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 15/156 (9%) Query: 20 IASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL 79 I++ +L+ T + S G +LP G + L+ + ++ +Q + G E+ P + L Sbjct: 36 ISTKQLLYTTDPV---SPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVITPLIFKTKL 92 Query: 80 WVESGRYDSYGKEMLRLADR---------NDKAMIYG--PTHEEVMTDIFRSHIKSYRNL 128 W +SG +D+Y +M ++ N + YG P + IF +SY+ L Sbjct: 93 WKKSGHWDNYKDDMFKVVGNDLSKEEHTDNIEEHEYGLKPMNCPSHCMIFAKFDRSYQEL 152 Query: 129 PFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF 163 P + R+E G+ R R F D + F Sbjct: 153 PIRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIF 188 >gi|323475075|gb|ADX85681.1| threonyl-tRNA synthetase editing domain protein [Sulfolobus islandicus REY15A] gi|323477807|gb|ADX83045.1| threonyl-tRNA synthetase editing domain protein [Sulfolobus islandicus HVE10/4] Length = 386 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 3/95 (3%) Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 PD + P ++ L+ +K D ++ RL K G V DD+ + +G++ A Sbjct: 270 PDWLNPIQVRLLPVKKD---FLDFSIQVAERLRKEGIRVNIDDLDDSLGNKIRRAGTEWI 326 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 PL +I+G + V S + +K R ++ MS+EE++ Sbjct: 327 PLVIIIGEREVKTSTLTVKIRANNEQKSMSIEELV 361 >gi|322699026|gb|EFY90791.1| glycyl-tRNA synthetase 1 [Metarhizium acridum CQMa 102] Length = 662 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 15/176 (8%) Query: 258 ATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 ATS EKL L + ++S G+ G + + + V Sbjct: 443 ATSQEEREKLAKQLKDTGKISLDVAGVGDGKVEVASDTLKIEFRKRIENTREFTPNVIEP 502 Query: 316 SYGIGAMRVVAAVIE---------SSHDGKGII-WPDSVAPFKISLINIKAHDQVCRDAC 365 S+GIG R++ ++IE + +G++ +P +VAP K+ ++ + + Q R Sbjct: 503 SFGIG--RILYSLIEHNFWTRGSDGGDEARGVLSFPPTVAPTKVLIVPLSNNTQF-RPII 559 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +K+ +L G DD IG +++ D LG PL + V + + DS + ++ R Sbjct: 560 KKLSQQLRLAGISSRIDDSSASIGKRYSRNDELGTPLGITVDFQTLQDSTITLRDR 615 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK--HSYNKMFVSYLRI 184 +PF I +R+E+ PR G++R REFLM + F + P+G K H ++++ L + Sbjct: 238 QMPFASASIGKSYRNEISPRAGLLRVREFLMAEIEHF-VDPQGGKKHHRFHEVEDVVLLL 296 Query: 185 FHR 187 R Sbjct: 297 LDR 299 >gi|66809829|ref|XP_638638.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4] gi|60467254|gb|EAL65287.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 548 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 18/168 (10%) Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + RGI+ G +S + F+ G S+G+ R + ++ D K Sbjct: 263 TNGRGIQAATSHALGQNFSKMFNIEFENDKGTKSLAWQNSWGL-TTRTIGVMVMVHGDDK 321 Query: 337 GIIWPDSVAPFKISLI--NIKAHDQVCRDA-CEKIYARLSKVGCDVFWDDMGE-QIGSQF 392 G++ P ++P + +I + K D D+ ++I +L G V D+ G ++ Sbjct: 322 GLVLPPRISPIQAVVIPLHFKDSDTTAVDSKAKEIADQLKAAGIRVNLDNRPNYNPGHKY 381 Query: 393 AVADLLGFPLQVIVGSKFVSD-------------SKVEIKHRLTGIRE 427 +L G P+++ +G K V+ SKVEI + +TG++E Sbjct: 382 NHWELKGVPIRIEIGPKDVASGTVICCRRDTAEKSKVEISNIVTGVKE 429 Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust. Identities = 37/172 (21%), Positives = 65/172 (37%), Gaps = 6/172 (3%) Query: 23 HKLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-LW 80 ++ R+ MI + G Y P + + A E + P L S L Sbjct: 61 QNVITRSEMIDYYDISGCYILRPWAYSIWEQIQAFFDAEIKKLDVQNAYFPLLVSEKALT 120 Query: 81 VESGRYDSYGKEMLRLADRNDKAMI----YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 E + + E+ + D + PT E +M + + I+S+R+LP Q Sbjct: 121 TEKDHIEGFAPEVAWVTKSGDSQLADPVAIRPTSETIMYPAYANWIRSHRDLPLKLNQWV 180 Query: 137 LKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 R E + +RSREFL ++ ++ E + + Y R++ L Sbjct: 181 NVVRWEFKRPVPFLRSREFLWQEGHTAFANKEEADEEVFTILDLYRRVYEEL 232 >gi|269926770|ref|YP_003323393.1| prolyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] gi|269790430|gb|ACZ42571.1| prolyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] Length = 483 Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 79/215 (36%), Gaps = 36/215 (16%) Query: 37 KGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADL----------------W 80 +G+ + P G +N+ ++ TG + P L L W Sbjct: 39 RGMMVYRPYGYAIWENIQKLLDARFKATGVVNAYFPLLIPESLLRKEAEHVEGFNPQVAW 98 Query: 81 VESGRYDSYGKEML--RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLK 138 V G G E L RLA R PT E ++ ++ ++SYR+LP Q Sbjct: 99 VTHG-----GNEELEERLAVR--------PTSEAIIMQMYSKWVQSYRDLPILINQWNSV 145 Query: 139 FRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR-LGLKSIPMR- 196 R EL R +R+ EFL ++ ++ + E + M Y L + IP R Sbjct: 146 VRWELHTRL-FLRTAEFLWQEGHTLHASAEEATERTLLMLEVYRSFLEEDLAIPVIPGRK 204 Query: 197 --AESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 +E P + ++ D Q S DF D Sbjct: 205 TPSERFPGAAETYTVEALMGDGRALQSATSHDFAD 239 Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 6/150 (4%) Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 F ++ TF DG+ Y S+G+ + R + +I D G+I P VAP ++ Sbjct: 237 FADHFAKAFDITFLDKDGERKYGYTTSWGL-STRTIGGIIMVHGDDSGLIIPPKVAPIQV 295 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVF--WDDMGEQI--GSQFAVADLLGFPLQVI 405 ++ I ++ + E I R+ +V D F D+ E+ G +F +L G P+++ Sbjct: 296 VVVPIWRSEEDKQKVLEHI-DRIKEVLGDSFRLHIDLSEEKTPGWKFNEWELKGVPVRLE 354 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 VG + V++S V + R + + L +++ Sbjct: 355 VGPRDVANSAVVLVRRDNRDKSQVPLNDLV 384 >gi|156065255|ref|XP_001598549.1| hypothetical protein SS1G_00638 [Sclerotinia sclerotiorum 1980] gi|154691497|gb|EDN91235.1| hypothetical protein SS1G_00638 [Sclerotinia sclerotiorum 1980 UF-70] Length = 665 Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 69/130 (53%), Gaps = 13/130 (10%) Query: 316 SYGIGAMRVVAAVIESSH---------DGKGII-WPDSVAPFKISLINIKAHDQVCRDAC 365 S+GIG R++ A++E ++ + +G++ +P VAP K+ L+ + +H+ + Sbjct: 506 SFGIG--RILYALMEHNYWTRGSEGGDEARGVLSFPPIVAPTKVLLVPLSSHESF-KPFL 562 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 ++I +L +G DD IG +++ D LG PL + V + V+DS ++ R + Sbjct: 563 KQISYKLRSMGISSRVDDSSASIGKRYSRNDELGTPLGITVDFQSVNDSTFTLRDRDSTK 622 Query: 426 REDMSLEEVI 435 + S E+++ Sbjct: 623 QVRASQEKIL 632 Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171 + +PF I +R+E+ PR G++R REFLM + F + PEG K Sbjct: 240 QQMPFASASIGKSYRNEISPRGGLLRVREFLMAEIEHF-VDPEGGK 284 >gi|300741607|ref|ZP_07071628.1| threonine--tRNA ligase [Rothia dentocariosa M567] gi|300380792|gb|EFJ77354.1| threonine--tRNA ligase [Rothia dentocariosa M567] Length = 677 Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust. Identities = 81/404 (20%), Positives = 146/404 (36%), Gaps = 77/404 (19%) Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRSHIK 123 +S P + DL+ SG Y M + ++ KAM P H E I+RS + Sbjct: 316 VSTPHISKEDLFYTSGHLPYYADGMFPAMELDNGNYRLKAM-NCPMHNE----IYRSRGR 370 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSF---DLTPEGSKHSYNKMFV 179 SYR LP F++ +RDE G+ R R D++S+ + P+ +H N M Sbjct: 371 SYRELPLRFFEFGTVYRDEKSGVLQGLTRVRMITQDDSHSYVTKEQAPDEVRHLLNFM-- 428 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G+ + + GD +FI TD Sbjct: 429 --LSLLEDFGMTDFYLELSTRDTEGDKKDKFI------------------------GTD- 461 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE-------NKRVSARGIE-VGHIFYFG 291 EQW A V E + +P+ ++S + + +G + Sbjct: 462 ----------EQWEQATAVLEQVAKETGLELVPDPGGAAFYGPKISVQAKDAIGRTWQMS 511 Query: 292 T-KYSLPMSATF----KGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 T +Y + F + ADG V + S G++ V+ + G W ++ Sbjct: 512 TVQYDFNQPSRFGLEYQAADGSIQEPVMIHSAKFGSIERFLGVLTEHYAGAFPAW---LS 568 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P ++ + + + D +I +L + G V D ++ + A P +I Sbjct: 569 PVQVICVPVA---EAFNDYMTEIADKLREQGVRVEVDYGSDRFTKKIRTASTEKVPFILI 625 Query: 406 VGSKFVSDSKVEIKHR----LTGIREDMSLEEVINYASHRFSNN 445 G + V + R G+ D ++ ++N+ +R + + Sbjct: 626 AGGEDAEAGAVSFRFRGNKQENGVPVDEAVVRIVNHIRNRVNED 669 >gi|304439592|ref|ZP_07399496.1| threonine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371904|gb|EFM25506.1| threonine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 647 Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust. Identities = 83/382 (21%), Positives = 138/382 (36%), Gaps = 53/382 (13%) Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + + LW SG +D Y M D D A+ P + ++ Sbjct: 297 NGYGEIQTPIILNEALWHRSGHWDHYKDNMYFTKIDGEDYAV--KPMNCPGSILVYEEKA 354 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + R EL G+ R R F DA+ + L PE K KM Sbjct: 355 HSYRDLPIRLSEFGQVHRHELSGALHGLFRVRTFTQDDAHVYCL-PEQVKDEVFKMIDLA 413 Query: 182 LRIFHRLGLK-SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G K I + G T E K+ D + + Sbjct: 414 ELLYSTFGFKYEIELSTRPDDFMG-----------TIEAWNIAEKNLKD-ALEERGLKY- 460 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT---KYSLP 297 +I E A Y D H E +G + GT + +P Sbjct: 461 ------TINEGDGAFYGPKIDFHLEDA----------------IGRTWQCGTIQLDFRMP 498 Query: 298 --MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 T+ ADG K V + +G++ ++ GK +W +AP ++ +I + Sbjct: 499 ENFELTYINADGEKARPVMLHRALLGSIERFMGILIEHFAGKFPLW---LAPVQVEIIPV 555 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + D E++ +L G V D E++G + A L +++G + V Sbjct: 556 ---SEKFHDYAEEVKNKLKTSGFRVEMDTRAEKVGYKIRQAQLRKVNYMLVIGEQEVESG 612 Query: 415 KVEIKHRLTGIREDMSLEEVIN 436 + I+ R +D+ +E+ I+ Sbjct: 613 LLSIRKRSGEEVKDVKIEDFIS 634 >gi|259147648|emb|CAY80898.1| Mst1p [Saccharomyces cerevisiae EC1118] Length = 462 Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 16/158 (10%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQN-RTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 S G +LP G K + + ++ +Q + G E+ P + LW +SG +++Y +M Sbjct: 55 SPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMF 114 Query: 95 RLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 ++ +++ YG P + IF +SY LP F R+E G+ R Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTR 174 Query: 152 SREFLMKDAYSFDLTPEGSKHS-----------YNKMF 178 R+F D + F TP K YNK+F Sbjct: 175 LRKFHQDDGHIF-CTPSQVKSEIFNSLKLIDIVYNKIF 211 >gi|302897411|ref|XP_003047584.1| hypothetical protein NECHADRAFT_85892 [Nectria haematococca mpVI 77-13-4] gi|256728515|gb|EEU41871.1| hypothetical protein NECHADRAFT_85892 [Nectria haematococca mpVI 77-13-4] Length = 1097 Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 1/96 (1%) Query: 94 LRLADRN-DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRS 152 + + D+N D + PT E +M + I+S+R+LP Q R E + +R+ Sbjct: 55 MTIGDKNLDVPVAIRPTSEAIMYPYYSKWIRSHRDLPLRLNQWNSVVRWETKQTTPFLRT 114 Query: 153 REFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 REFL ++ ++ LT E + ++ Y +I+ L Sbjct: 115 REFLWQEGHTAHLTEEEAGKEVLEILELYAKIYEDL 150 >gi|237755902|ref|ZP_04584494.1| threonyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691927|gb|EEP60943.1| threonyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] Length = 643 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 80/417 (19%), Positives = 151/417 (36%), Gaps = 53/417 (12%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + ++E + G + P + LW SG Y + M Sbjct: 266 GLAIWLPKGAIIRKEIEDAWKKEHLKRGYQLVYTPHVGKEQLWQTSGHLSLYQENMYPRM 325 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + +I++S +SY+ LP ++ +R E G+MR R F Sbjct: 326 QIEEEGYYVKPMNCPFHVEIYKSKQRSYKELPIRLAELGTVYRYERSGALHGLMRVRGFT 385 Query: 157 MKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLSHEFIVL 213 DA+ + + ++ L G + + P +G D E Sbjct: 386 QDDAHII-CREDQVEDEIREVLNLALNTLKSYGFDEFEVYLSTKPEKYVGDDKMWE---- 440 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 +++ + I S D+ I E A Y DV K+ D+ Sbjct: 441 ---------IAENSLRKAIESTGLDY-------KIDEGGGAFYGPKIDV---KIKDA--- 478 Query: 274 NKRVSARGIEVGHIFYFGT---KYSLP--MSATFKGADGKDHYVQMGSYGI-GAMRVVAA 327 +G ++ T ++LP + G D + H M I G++ Sbjct: 479 ----------IGRLWQCSTIQFDFNLPERFDMYYIGEDNQKHRPYMIHRAIFGSIERFIG 528 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 V+ + G +W ++P ++ +I I + E + +L + V DD E+ Sbjct: 529 VLLEHYAGFLPVW---LSPVQVKIIPIADKH---LEYAETVKQKLLENDIRVELDDRNER 582 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + + A+L P ++VG K V ++ + + +S++E ++ SN Sbjct: 583 MNKKIRDAELQKIPFMLVVGDKEAETGTVAVREKGKQGSQTLSIDEFVSKIKEIISN 639 >gi|298709340|emb|CBJ31276.1| ATP binding / tRNA ligase/ threonine-tRNA ligase [Ectocarpus siliculosus] Length = 470 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 3/160 (1%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 +++ RD + KL L + + G+ W P G + + + G + Sbjct: 275 MVEAKRRDHRVLGKKLDLFS-LQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELL 333 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + + DLW SG +D Y M D P + +++ ++SYR LP Sbjct: 334 YTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELP 393 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPE 168 + ++ +R E G+MR R F DA+ F L PE Sbjct: 394 IRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCL-PE 432 >gi|85374048|ref|YP_458110.1| prolyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] gi|123099532|sp|Q2NAH8|SYP_ERYLH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|84787131|gb|ABC63313.1| putative prolyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] Length = 514 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 4/97 (4%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + ++ G Y GT +S + F+ +G + Y S+G+ + R++ VI + D G+ Sbjct: 236 GKALQAGTSHYLGTNFSEAANIKFQDREGGEKYCHTTSWGV-STRMIGGVIMTHGDDDGL 294 Query: 339 IWPDSVAPFKISLINI---KAHDQVCRDACEKIYARL 372 P +AP+++ ++ + K D CE + +L Sbjct: 295 KVPPRIAPYQVVILPMLRDKPEDDALLAYCEDLRGKL 331 >gi|325989371|ref|YP_004249070.1| prolyl-tRNA synthetase [Mycoplasma suis KI3806] gi|323574456|emb|CBZ40106.1| Prolyl-tRNA synthetase [Mycoplasma suis] Length = 463 Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust. Identities = 87/423 (20%), Positives = 162/423 (38%), Gaps = 78/423 (18%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 L +G H +G + W + + + + E ++ G + P L + E + Sbjct: 21 LVSGTFFLHPRGCFIW--------EQIQSFLNAEFSKLGVSNVLFPALLPFQKFQEEQKN 72 Query: 87 DSYG--KEMLRLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYR-NLPFTFYQIQLKFRD 141 +E++RL + + + PT E + + FR +K LPF Q +R+ Sbjct: 73 SETLNLEEIMRLHNSKSEQSVVALRPTSEILFSHYFRERLKERDIKLPFLLNQWSSVYRE 132 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 E + RS+EF ++ +S + K+ Y ++ L Sbjct: 133 ERNTKL-FFRSKEFYWQELHSLHENQKDLDFHLEKIHEIYKKLLREL------------- 178 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD 261 L E+I TGE + FP ++ T ++ I + + + T D Sbjct: 179 ----LCIEYI----TGEKTIL-----ERFP-GAQKTLTNECI----LPDGQSLQLTTTHD 220 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGA 321 + N F L + K A IE+ L +SA GS + Sbjct: 221 LSN--FFSKLMDIKYWGANDIEMT---------PLQLSA--------------GS----S 251 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEKIYARLSKVGCDVF 380 R++ A++E D G+I P +++ I+++ + + D+ I +L + Sbjct: 252 TRLIGALVEMHKDSVGVILPWNLSKENIAILLLGENRDEETISYISSIREKLCNYRLHI- 310 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 DD G + + LG P+ +I+G + + + K+ IK RL+ + + L + N S Sbjct: 311 -DDSYSSFGKKINKVERLGIPVSLIIGQQEIKNKKITIKSRLSESKYECDLSNLENEIS- 368 Query: 441 RFS 443 RFS Sbjct: 369 RFS 371 >gi|6322654|ref|NP_012727.1| Mst1p [Saccharomyces cerevisiae S288c] gi|549032|sp|P07236|SYTM_YEAST RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; Flags: Precursor gi|486345|emb|CAA82038.1| MST1 [Saccharomyces cerevisiae] gi|285813075|tpg|DAA08972.1| TPA: Mst1p [Saccharomyces cerevisiae S288c] Length = 462 Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 16/158 (10%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQN-RTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 S G +LP G K + + ++ +Q + G E+ P + LW +SG +++Y +M Sbjct: 55 SPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMF 114 Query: 95 RLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 ++ +++ YG P + IF +SY LP F R+E G+ R Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTR 174 Query: 152 SREFLMKDAYSFDLTPEGSKHS-----------YNKMF 178 R+F D + F TP K YNK+F Sbjct: 175 LRKFHQDDGHIF-CTPSQVKSEIFNSLKLIDIVYNKIF 211 >gi|148377533|ref|YP_001256409.1| glycyl-tRNA synthetase [Mycoplasma agalactiae PG2] gi|148291579|emb|CAL58965.1| Glycyl tRNA synthetase (Glycine tRNA ligase) [Mycoplasma agalactiae PG2] Length = 458 Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust. Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 4/102 (3%) Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P+ VAP+K +++ + + E+IY +L K+ + +DD G IG ++ D +G Sbjct: 360 PNGVAPYKFAILPLVKK---LNEKAEEIYKQLLKLNIPITYDDAG-SIGKRYRRQDSIGT 415 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 P + + ++D + I++R + +E +S+ + +A F Sbjct: 416 PYCITIDYDSLNDECITIRNRDSMSQERISISNLYEFAQKTF 457 >gi|172012|gb|AAA34808.1| thr-tRNA-synthetase [Saccharomyces cerevisiae] Length = 462 Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 16/158 (10%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQN-RTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 S G +LP G K + + ++ +Q + G E+ P + LW +SG +++Y +M Sbjct: 55 SPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMF 114 Query: 95 RLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 ++ +++ YG P + IF +SY LP F R+E G+ R Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTR 174 Query: 152 SREFLMKDAYSFDLTPEGSKHS-----------YNKMF 178 R+F D + F TP K YNK+F Sbjct: 175 LRKFHQDDGHIF-CTPSQVKSEIFNSLKLIDIVYNKIF 211 >gi|13508292|ref|NP_110242.1| threonyl-tRNA synthetase [Mycoplasma pneumoniae M129] gi|2501059|sp|P75225|SYT_MYCPN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|1673960|gb|AAB95937.1| threonyl-tRNA synthetase [Mycoplasma pneumoniae M129] gi|301633413|gb|ADK86967.1| threonine--tRNA ligase [Mycoplasma pneumoniae FH] Length = 564 Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 10/93 (10%) Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLI--NIKAHDQVCRDACEKIYARLSKVGCDVF 380 R +AA++E +H G +W +AP ++ +I NI H++ A +K+Y +L K V Sbjct: 450 RFIAALLEKTH-GNLPLW---MAPVQVVVIPVNIDKHEK----AAKKLYQKLLKENIRVS 501 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D+ +++G + A + PLQ+IVG K + D Sbjct: 502 LDESEDRLGKKVRTAIVNKIPLQIIVGDKEMQD 534 >gi|225849423|ref|YP_002729587.1| threonyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644143|gb|ACN99193.1| threonyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] Length = 641 Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 1/125 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ WLP G + +EE + G + P + LW SG Y + M Sbjct: 266 GLAIWLPKGAIIRKEIEDAWKEEHLKRGYQLVYTPHVGKEHLWQTSGHLSFYQENMYPRM 325 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 ++ P + +I++S +SY+ LP ++ +R E G+MR R F Sbjct: 326 QIEEEGYYVKPMNCPFHVEIYKSKQRSYKELPIRLAELGTVYRYERSGALHGLMRVRGFT 385 Query: 157 MKDAY 161 DA+ Sbjct: 386 QDDAH 390 >gi|225155152|ref|ZP_03723647.1| threonyl-tRNA synthetase [Opitutaceae bacterium TAV2] gi|224804099|gb|EEG22327.1| threonyl-tRNA synthetase [Opitutaceae bacterium TAV2] Length = 646 Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 12/147 (8%) Query: 284 VGHIFYFGT---KYSLPM--SATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKG 337 +G + GT Y+LP+ ++ GAD + H V + G+M V+ G Sbjct: 469 IGREWQLGTVQVDYNLPVRFDLSYIGADNQPHRPVMIHRAPFGSMERFCGVLIEHFAGDF 528 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 +W +AP ++ ++ I D+V + EK+Y L + G V D ++IG++ A+L Sbjct: 529 PVW---LAPEQVRILPIS--DKVAAYS-EKLYNELREAGVRVVLDSDSDKIGAKLRRAEL 582 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTG 424 P ++ G K + ++ R G Sbjct: 583 SKIPYMIVAGQKEAEAEAISVRSRAKG 609 >gi|51893696|ref|YP_076387.1| threonyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] gi|73919833|sp|Q67LA3|SYT_SYMTH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|51857385|dbj|BAD41543.1| threonyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] Length = 651 Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 3/157 (1%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 + G WL G + + R+ Q G E+S P + S+ L+ SG + Y + M Sbjct: 262 APGFAFWLDKGYRLYRELENWSRKLQEARGYEEVSTPWIVSSKLYETSGHWQHYRQNMFE 321 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + D+ P + +++S I+SYR+LP + R E G++R R Sbjct: 322 IR-AEDQDFATKPMNCPCHCVLYKSQIRSYRDLPLKIAEYGPLSRFEASGTLHGLLRVRG 380 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 F DA+ F + P+ + ++ I+ LGL+ Sbjct: 381 FHQDDAHLF-VRPDQIEEQIREVIGLVDTIYGTLGLE 416 >gi|323336851|gb|EGA78113.1| Mst1p [Saccharomyces cerevisiae Vin13] gi|323347699|gb|EGA81963.1| Mst1p [Saccharomyces cerevisiae Lalvin QA23] Length = 462 Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 16/158 (10%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQN-RTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 S G +LP G K + + ++ +Q + G E+ P + LW +SG +++Y +M Sbjct: 55 SPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMF 114 Query: 95 RLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 ++ +++ YG P + IF +SY LP F R+E G+ R Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTR 174 Query: 152 SREFLMKDAYSFDLTPEGSKHS-----------YNKMF 178 R+F D + F TP K YNK+F Sbjct: 175 LRKFHQDDGHIF-CTPSQVKSEIFNSLKLIDIVYNKIF 211 >gi|167957086|ref|ZP_02544160.1| threonyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7c] Length = 603 Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust. Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 3/123 (2%) Query: 71 VPTLQSADLWVESGRYDSYGKEM-LRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + DL+ +SG + +G+E+ L + M P + T IF S +SYR++P Sbjct: 257 TPHITKKDLYEKSGHWAKFGEELFLVKSQETSDEMALKPMNCPHHTQIFASRPRSYRDMP 316 Query: 130 FTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + + +RDE G+ R R D++ F P+ + N + + ++ + Sbjct: 317 VRYLETTTDYRDEKTGELGGLSRVRSLTQDDSHVF-CRPDQIEEEINNLLSAARELYESI 375 Query: 189 GLK 191 +K Sbjct: 376 DMK 378 >gi|240282267|gb|EER45770.1| prolyl-tRNA synthetase [Ajellomyces capsulatus H143] gi|325088406|gb|EGC41716.1| prolyl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 606 Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 39/81 (48%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E VM + I+S+R+LP Q R E + +R+REFL ++ ++ LT Sbjct: 199 PTSETVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEFKNPQPFLRTREFLWQEGHTAHLTE 258 Query: 168 EGSKHSYNKMFVSYLRIFHRL 188 G+ ++ Y ++ L Sbjct: 259 GGAHEEVLQILEHYAHVYEEL 279 >gi|282599730|ref|ZP_05971662.2| threonine--tRNA ligase [Providencia rustigianii DSM 4541] gi|282568410|gb|EFB73945.1| threonine--tRNA ligase [Providencia rustigianii DSM 4541] Length = 653 Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust. Identities = 82/425 (19%), Positives = 153/425 (36%), Gaps = 50/425 (11%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + Y L + + RD +L L + + + G+ W G + +R + Sbjct: 241 AAYLLRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWTIFRELETFVRTKLKS 298 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW +G +++Y M + N + + P + IF +K Sbjct: 299 YNYQEVKGPFMMDRVLWERTGHWENYKDAMFTTSSENREYCV-KPMNCPGHVQIFNQGLK 357 Query: 124 SYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F T + Sbjct: 358 SYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIF-CTEDQILSEVTSCIEMIY 416 Query: 183 RIFHRLGLKSIPMRAESGP---IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + I ++ + P IG D + A+ SK P E + Sbjct: 417 DVYSTFGFEKIVVKLSTRPEKRIGTD---DMWDTAEADLANALKSKGIEFEYQPGEGAFY 473 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP-- 297 I L+D L R + G + + LP Sbjct: 474 GPKIEFT--------------------LYDCLD-------RAWQCGTV---QLDFFLPGR 503 Query: 298 MSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 ++A++ G + + V + +G++ ++ + G +P +AP ++ ++NI Sbjct: 504 LNASYVGENNERITPVMIHRAVLGSLERFIGILTEEYAG---FFPTWLAPQQVVVMNIT- 559 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +++ +L VG D E+IG + L P ++ G K V KV Sbjct: 560 --DTQAEYVQELVNKLQSVGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKV 617 Query: 417 EIKHR 421 ++ R Sbjct: 618 SVRTR 622 >gi|151941725|gb|EDN60086.1| mitochondrial aminoacyl-tRNA synthetase, threonine [Saccharomyces cerevisiae YJM789] gi|190409649|gb|EDV12914.1| threonyl-tRNA synthetase, mitochondrial precursor [Saccharomyces cerevisiae RM11-1a] gi|323304221|gb|EGA57996.1| Mst1p [Saccharomyces cerevisiae FostersB] gi|323308307|gb|EGA61553.1| Mst1p [Saccharomyces cerevisiae FostersO] gi|323332690|gb|EGA74095.1| Mst1p [Saccharomyces cerevisiae AWRI796] gi|323354220|gb|EGA86064.1| Mst1p [Saccharomyces cerevisiae VL3] Length = 462 Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 16/158 (10%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQN-RTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 S G +LP G K + + ++ +Q + G E+ P + LW +SG +++Y +M Sbjct: 55 SPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMF 114 Query: 95 RLADRNDKAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMR 151 ++ +++ YG P + IF +SY LP F R+E G+ R Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTR 174 Query: 152 SREFLMKDAYSFDLTPEGSKHS-----------YNKMF 178 R+F D + F TP K YNK+F Sbjct: 175 LRKFHQDDGHIF-CTPSQVKSEIFNSLKLIDIVYNKIF 211 >gi|145529361|ref|XP_001450469.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124418080|emb|CAK83072.1| unnamed protein product [Paramecium tetraurelia] Length = 769 Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 9/138 (6%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + HQ S G + P G + + +R + G E+ P + +A LW SG YD Y Sbjct: 180 LFHQLSPGSAFFYPSGAHIYNTLMNFLRRQYYIRGYQEVISPNIFNAQLWKISGHYDKYK 239 Query: 91 KEM--LRLADRNDKAM--IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 + + + + + + + + P H +M D+ + SYR+LP F + R+E+ Sbjct: 240 ENLFFINMGEEGEYGLKPMNCPGH-CLMFDMIQH---SYRDLPVRFADFGVLHRNEVHGA 295 Query: 147 F-GVMRSREFLMKDAYSF 163 G+ R R F DA+ F Sbjct: 296 LSGLTRVRRFQQDDAHIF 313 >gi|303278011|ref|XP_003058299.1| predicted protein [Micromonas pusilla CCMP1545] gi|226460956|gb|EEH58250.1| predicted protein [Micromonas pusilla CCMP1545] Length = 698 Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 1/129 (0%) Query: 38 GIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA 97 G+ W P G + + ++ G + P + DLW SG D Y + M + Sbjct: 321 GLVFWHPKGALMRNIIENFWKDIHMARGYDLLYTPHVGKLDLWKTSGHADFYAENMYKPM 380 Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFL 156 D D+ P + +++ SYR+LP + ++ +R E G+ R R F Sbjct: 381 DVEDETYQLKPMNCPFHVAVYKDGYFSYRDLPIRWAEMGTVYRYERSGTMHGLFRVRGFT 440 Query: 157 MKDAYSFDL 165 DA+ F L Sbjct: 441 QDDAHIFCL 449 >gi|301167107|emb|CBW26686.1| threonyl-tRNA synthetase [Bacteriovorax marinus SJ] Length = 584 Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust. Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 3/161 (1%) Query: 42 WLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND 101 ++P G + + +RE + E+ P + +DLW SG Y+ Y KE + + ++ Sbjct: 206 FMPKGAFVYNRLIEFMREIYRKYDYQEVITPQILDSDLWHTSGHYEHY-KENMYFSRIDE 264 Query: 102 KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI-QLKFRDELRPRFGVMRSREFLMKDA 160 + P + +F+ + SYR+LP + +L ++ G+ R R F DA Sbjct: 265 REYAVKPMNCPCHMLMFKHYKYSYRDLPMRYADFGRLHRYEKAGAVTGLTRVRTFCQDDA 324 Query: 161 YSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 + F + +G + K+ + + G I + + P Sbjct: 325 HIF-IDMDGIQDEITKLMEMFFICYEHFGFTGIKVNLSTRP 364 >gi|164427281|ref|XP_964988.2| threonyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa OR74A] gi|157071680|gb|EAA35752.2| threonyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa OR74A] Length = 498 Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 13/183 (7%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M +S G +LP G + + + +R++ G E+ PT+ LW +SG ++Y Sbjct: 67 MTSIYSPGSPIFLPNGARIFNRLVEYLRKQYVHYGFQEVITPTIYKKALWAKSGHLENYA 126 Query: 91 KEMLRLA----DRND-----KAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 +M + R D +A YG P + IF + +SYR+LP + Sbjct: 127 DDMFTVTSTSPSRADVTEAGEADEYGLKPMNCPGHCLIFAAQKRSYRDLPIRYADFSPLH 186 Query: 140 RDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE 198 R+E+ G+ R R F D + F P + +K R++ L S ++ Sbjct: 187 RNEISGALSGLTRVRRFHQDDGHIF-CRPNQIEDEISKTLEFIRRVYKDFRLGSYRLKLS 245 Query: 199 SGP 201 + P Sbjct: 246 TRP 248 >gi|297626431|ref|YP_003688194.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922196|emb|CBL56764.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 680 Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP FY++ FR E G+ R R F D++++ TPE + Sbjct: 367 IFRSRGRSYRELPLRFYELGRDFRYEKSGVVQGLTRMRGFTQDDSHTY-CTPEQAGDEIK 425 Query: 176 KMFVSYLRIFHRLGLK 191 + +L I GLK Sbjct: 426 MLLGFFLSILRDFGLK 441 >gi|261493242|ref|ZP_05989769.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496515|ref|ZP_05992895.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307718|gb|EEY09041.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311092|gb|EEY12268.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 643 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW ++G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T E + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEEQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTRPENRIGDD 431 >gi|297565426|ref|YP_003684398.1| threonyl-tRNA synthetase [Meiothermus silvanus DSM 9946] gi|296849875|gb|ADH62890.1| threonyl-tRNA synthetase [Meiothermus silvanus DSM 9946] Length = 652 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 6/151 (3%) Query: 36 SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR 95 KG+ WLP G + + E++ G + P + S+ L+ SG Y +M Sbjct: 270 GKGLPLWLPKGAFIRKQLEQYMYEKEQEYGYDYVITPHIASSKLYYTSGHLPYYKDDMYA 329 Query: 96 LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSRE 154 + + P + I+++ ++SYR+LP + +R EL G+ R R Sbjct: 330 PIEIEGEEYYLKPMNCPHHHMIYKARLRSYRDLPLRLAEFGTVYRFELSGTLSGLARVRG 389 Query: 155 FLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 F DA+ + SK F+ +++F Sbjct: 390 FTQNDAHIY-----CSKSQVTDEFIKVIQLF 415 >gi|283457978|ref|YP_003362585.1| threonyl-tRNA synthetase [Rothia mucilaginosa DY-18] gi|283134000|dbj|BAI64765.1| threonyl-tRNA synthetase [Rothia mucilaginosa DY-18] Length = 706 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 51/210 (24%), Positives = 83/210 (39%), Gaps = 16/210 (7%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPL----GQKALDNVNAIIREEQNRTGAI 67 +E +AE H+ + R + K I LP+ G + +R + G Sbjct: 283 KERIAEAERRDHRRLGRELDLFSFPKNIGPGLPVIHPKGGVIKREMEDYVRTRHIQEGFQ 342 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRSHI 122 +S P + DL+ SG Y M + ++ KAM P H E I+RS Sbjct: 343 YVSTPHISKEDLFYTSGHLPYYADGMFPPMELDNGHYRLKAM-NCPMHNE----IYRSRG 397 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP F++ +RDE G+ R R D++S+ +T E + + Sbjct: 398 RSYRELPLRFFEFGTVYRDEKSGVLQGLTRVRMITQDDSHSY-VTKEQAPDEVRHLLKFM 456 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 L + G+ + + GD +FI Sbjct: 457 LSLLEDFGMTDFYLELSTRDTEGDKKDKFI 486 >gi|296820624|ref|XP_002849971.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238837525|gb|EEQ27187.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 520 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 8/137 (5%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 +S G + P G L+ + + +R + + G E+ P + LW SG + +Y +M Sbjct: 73 YSPGSPLFRPNGTHILNKLISFLRAQYRQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMY 132 Query: 95 RLADRNDKAM-----IYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF 147 + R + A YG P + +F+S SYR LP + R+E+ Sbjct: 133 EVGGRGNTAEATEDETYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSL 192 Query: 148 -GVMRSREFLMKDAYSF 163 G+ R R F D + F Sbjct: 193 SGLTRVRRFHQDDGHIF 209 >gi|149244270|ref|XP_001526678.1| threonyl-tRNA synthetase, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] gi|146449072|gb|EDK43328.1| threonyl-tRNA synthetase, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] Length = 486 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 40/181 (22%) Query: 19 EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD 78 EI++ +L+ T + S G +LP G + L+ + ++ +Q + G E+ P + Sbjct: 43 EISTKQLLYTTDIT---SPGSIFFLPHGTRILNKLIQFMKNQQIKYGFHEVVTPLIFKTK 99 Query: 79 LWVESGRYDSYGKEMLRLADRNDKA-----MIYGPT-HEEVMTD---------------- 116 LW +SG +D+Y +M ++ NDK+ ++ PT E +TD Sbjct: 100 LWKKSGHWDNYKDDMFKVVG-NDKSKEEVVVVLAPTVQSESLTDDGNDSALQEAFEEEHE 158 Query: 117 -------------IFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYS 162 IF +SY LP + R+E G+ R R F D + Sbjct: 159 YGLKPMNCPGHCMIFSKFERSYNELPIRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHI 218 Query: 163 F 163 F Sbjct: 219 F 219 >gi|321309527|ref|YP_004191856.1| prolyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1] gi|319801371|emb|CBY92017.1| prolyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1] Length = 467 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 13/145 (8%) Query: 46 GQKALDNVNAIIREEQNRTGAIEMSVPT-LQSADLWVESGRYDSYGKEML---RLADRND 101 G + + I + + G +S PT + A++ E R + E+ R D Sbjct: 37 GWNIWEKIRDFIDAKYKQKGIKNVSFPTFIPVAEIEREKSRLSGFNPEIYLVSRSGDEER 96 Query: 102 KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAY 161 + PT E + + FR+ ++SY +LP F Q FR E + +R+ EF ++A+ Sbjct: 97 QNFFLRPTSEILFSHYFRNILESYEDLPLLFNQWCNVFRAEKNTK-AFLRTCEFHWQEAH 155 Query: 162 SFDLTPEGSKHSYNKMFVSYLRIFH 186 + L+ E + + YL+ FH Sbjct: 156 TLHLSKEEA--------MEYLKFFH 172 Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust. Identities = 30/158 (18%), Positives = 65/158 (41%), Gaps = 3/158 (1%) Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 + +++ Y ++ + + Y S G + R++ A+I S D G+ Sbjct: 214 GQALQIATSHYLSKNFTETFDVKYTSRENVVSYPHQLSAGC-STRLIGALIMSHGDDSGL 272 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + P S+ I + I + +K L G V WD G + +++ Sbjct: 273 VLPLSMFDVHIKFLIINGAVTEGSELHKKFSDELK--GYKVEWDFSSRSFGYKIKNEEMI 330 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 G P+ VI+G + + +K RL+ + + ++++I+ Sbjct: 331 GTPVSVILGPSEIKSNWALVKTRLSESKVSIPMDQLIS 368 >gi|159040920|ref|YP_001540172.1| glycyl-tRNA synthetase [Caldivirga maquilingensis IC-167] gi|157919755|gb|ABW01182.1| glycyl-tRNA synthetase [Caldivirga maquilingensis IC-167] Length = 590 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 90/183 (49%), Gaps = 13/183 (7%) Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 A + V+ E+L L V G +V F S +S + H ++ S+ Sbjct: 390 ALASVNPEELVRELTSKGEVVINGFKVTRDMVFIKTESRKVST----ENFIPHVIE-PSF 444 Query: 318 GIGAMRVVAAVIESSH---DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 GI R++ +E+++ DG+ ++ P VAP ++++ I + ++ + A + I L Sbjct: 445 GID--RILYVTLENAYALIDGRIVLKLPRDVAPITVAVLPIVSRGELIKVA-KDIRINLI 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +DD G IG+++A D LG PL V V + + D+ V ++ R + ++ + +++ Sbjct: 502 NEGITAVYDD-GGTIGARYAKWDSLGTPLAVTVDADTLKDNTVTVRDRDSRVQVRVKVQD 560 Query: 434 VIN 436 +++ Sbjct: 561 LVS 563 >gi|322387197|ref|ZP_08060807.1| serine--tRNA ligase [Streptococcus infantis ATCC 700779] gi|321141726|gb|EFX37221.1| serine--tRNA ligase [Streptococcus infantis ATCC 700779] Length = 424 Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust. Identities = 50/227 (22%), Positives = 89/227 (39%), Gaps = 40/227 (17%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G Y + + ++D N + PT E +T+ +R I + LP F + Sbjct: 200 NHDSMFGTGNYPKFKDDTFEISDTN---YVLIPTAEVPLTNYYRDEIIDGKELPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNL- 314 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF-MDFPIPSENT 237 P R +V TG+ +K + ++ IP++NT Sbjct: 315 --PYR--------------VVALSTGDMGFSAAKTYDLEVWIPAQNT 345 >gi|255327209|ref|ZP_05368284.1| threonine--tRNA ligase [Rothia mucilaginosa ATCC 25296] gi|255295827|gb|EET75169.1| threonine--tRNA ligase [Rothia mucilaginosa ATCC 25296] Length = 677 Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust. Identities = 51/210 (24%), Positives = 83/210 (39%), Gaps = 16/210 (7%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPL----GQKALDNVNAIIREEQNRTGAI 67 +E +AE H+ + R + K I LP+ G + +R + G Sbjct: 254 KERIAEAERRDHRRLGRELDLFSFPKNIGPGLPVIHPKGGVIKREMEDYVRTRHIQEGFQ 313 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRSHI 122 +S P + DL+ SG Y M + ++ KAM P H E I+RS Sbjct: 314 YVSTPHISKEDLFYTSGHLPYYADGMFPPMELDNGHYRLKAM-NCPMHNE----IYRSRG 368 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP F++ +RDE G+ R R D++S+ +T E + + Sbjct: 369 RSYRELPLRFFEFGTVYRDEKSGVLQGLTRVRMITQDDSHSY-VTKEQAPDEVRHLLKFM 427 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFI 211 L + G+ + + GD +FI Sbjct: 428 LSLLEDFGMTDFYLELSTRDTEGDKKDKFI 457 >gi|312194258|ref|YP_004014319.1| prolyl-tRNA synthetase [Frankia sp. EuI1c] gi|311225594|gb|ADP78449.1| prolyl-tRNA synthetase [Frankia sp. EuI1c] Length = 468 Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 3/145 (2%) Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G ++ + GADG H S+G + R+V +I + D G+ P +AP ++ Sbjct: 230 LGQNFARAFDIDYLGADGARHLAWTTSWG-SSTRMVGGLIMAHGDDAGLRVPPRLAPTQV 288 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGS 408 ++ ++ ++V A + I L G D G G + +L G P++V VG Sbjct: 289 VVLPVRDDEKVVATATQ-IADALKAAGVRATLDARPGLSFGRRVTDWELKGAPVRVEVGP 347 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEE 433 + ++ V + R TG + + L E Sbjct: 348 RDLAVGNVTLARRDTGEKITVPLAE 372 Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 8/73 (10%) Query: 90 GKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 GKE+ ++ ++ PT E V+ + +SYR+LP Q R ELRPR Sbjct: 96 GKEL-------EEPVVVRPTSETVIGEYMAKWTQSYRDLPLLLNQWANVVRWELRPRL-F 147 Query: 150 MRSREFLMKDAYS 162 +R+ EFL ++ ++ Sbjct: 148 LRTSEFLWQEGHT 160 >gi|42524428|ref|NP_969808.1| prolyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100] gi|81616476|sp|Q6MIW2|SYP_BDEBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|39576637|emb|CAE80801.1| proS [Bdellovibrio bacteriovorus HD100] Length = 499 Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 9/161 (5%) Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + ++ G + G ++ + A+GK+ + S+G+ + R++ +I + D G + Sbjct: 233 KALQAGTSHFLGQNFAKASEIKYLSAEGKEEFAWTTSWGV-STRLIGGLIMTHSDDNGFV 291 Query: 340 WPDSVAPFKISLINIKAHD----QVCR--DACEKIYARLSKVGCDVF--WDDMGEQIGSQ 391 P +AP + +I I +D QV A EK + VG V DD + G + Sbjct: 292 VPPRLAPLHVVIIPIYRNDEERAQVLDYVKALEKDLKAQNYVGSSVRVKIDDRDMRGGEK 351 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G P++V VG + ++ +V + R G +E S+E Sbjct: 352 AWQYIKQGVPVRVEVGPRDMAKGEVFVGRRDRGPKEKASME 392 >gi|328479960|gb|EGF49006.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462] Length = 40 Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 27/40 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIY 40 M++S+ F+P +E P AE SHK+MLR+G + Q G+Y Sbjct: 1 MKQSRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQVQAGVY 40 >gi|687792|gb|AAC43729.1| putative threonyl-tRNA synthetase; similar to E. coli threonyl-tRNA synthetase SwissProt Accession Number P00955 [Haemophilus influenzae] gi|1587744|prf||2207242E ORF 4 Length = 443 Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTRPENRIGSD 431 >gi|302534311|ref|ZP_07286653.1| glycyl-tRNA synthetase [Streptomyces sp. C] gi|302443206|gb|EFL15022.1| glycyl-tRNA synthetase [Streptomyces sp. C] Length = 460 Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust. Identities = 73/356 (20%), Positives = 133/356 (37%), Gaps = 61/356 (17%) Query: 98 DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLM 157 D KA + T + + T+ S + PF Q+ FR+E+ P + R+REF Sbjct: 152 DTGSKAYLRPETAQGIFTNFAMVQTSSRKKPPFGIAQMGKSFRNEITPGNFIFRTREFEQ 211 Query: 158 KDAYSFDLTPEGSKHSYNKMFVSYLRIFHR-LGLKSIPMRAESGPIGGDLSHEFIVLADT 216 + F + P G + + ++ ++R LGL+ MR P LSH AD Sbjct: 212 ME-MEFFVKP-GEDDQWQEYWMQERWNWYRGLGLREENMRWYDHP-AEKLSHYSKRTADI 268 Query: 217 GETQVFCSKDFMDFPIPSENTDFD----------DIISLNSIVEQWTAPYAATSDVHNEK 266 F +F + + TD+D D++ + ++ PY Sbjct: 269 EYRFNFGGSEFSELEGVANRTDYDLKAHSAASGTDLVYYDQEAQEKYTPYVIE------- 321 Query: 267 LFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 A G+ + + Y + KGA K ++ Sbjct: 322 -----------PAAGVNRAMLAFMLDAYVEDEAPNAKGAMEKRTVMRFDP---------- 360 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 +AP K++++ + + + A + + A L K ++ +DD G Sbjct: 361 ----------------RLAPVKVAVLPLSRNANLSPKA-KGLAADLRK-NWNIEFDDAG- 401 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 IG ++ D +G P V V + D+ V ++ R T +E +SL+++ +Y R Sbjct: 402 AIGRRYRRQDEIGTPFCVTVDFDTLDDNAVTVRERDTMKQERVSLDQIQSYLGSRL 457 >gi|38567275|emb|CAE76565.1| related to threonine--tRNA ligase [Neurospora crassa] Length = 497 Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 13/183 (7%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 M +S G +LP G + + + +R++ G E+ PT+ LW +SG ++Y Sbjct: 66 MTSIYSPGSPIFLPNGARIFNRLVEYLRKQYVHYGFQEVITPTIYKKALWAKSGHLENYA 125 Query: 91 KEMLRLA----DRND-----KAMIYG--PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 +M + R D +A YG P + IF + +SYR+LP + Sbjct: 126 DDMFTVTSTSPSRADVTEAGEADEYGLKPMNCPGHCLIFAAQKRSYRDLPIRYADFSPLH 185 Query: 140 RDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAE 198 R+E+ G+ R R F D + F P + +K R++ L S ++ Sbjct: 186 RNEISGALSGLTRVRRFHQDDGHIF-CRPNQIEDEISKTLEFIRRVYKDFRLGSYRLKLS 244 Query: 199 SGP 201 + P Sbjct: 245 TRP 247 >gi|328778641|ref|XP_395662.3| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like isoform 1 [Apis mellifera] Length = 718 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 2/134 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 H+ S G + P G + + IR E + G E+ P + + LW SG + Y Sbjct: 330 FFHELSPGSCFFQPRGAYIYNTLVEFIRSEYRKRGFQEVVTPNIYNNKLWQTSGHWLHYA 389 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GV 149 + M D + P + IF +S+R LP + R+E+ G+ Sbjct: 390 ENMFSF-DVEKETFALKPMNCPGHCMIFDVRNRSWRELPLRMADFGVLHRNEMSGALTGL 448 Query: 150 MRSREFLMKDAYSF 163 R R F DA+ F Sbjct: 449 TRVRRFQQDDAHIF 462 >gi|301170119|emb|CBW29723.1| threonyl-tRNA synthetase [Haemophilus influenzae 10810] Length = 643 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTRPENRIGSD 431 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 9/131 (6%) Query: 294 YSLP--MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++LP + AT+ D + V + +G++ +I + G +W +AP + Sbjct: 487 FALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPVW---LAPTQAV 543 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 +INI D +K+ +LS VG V D E++G + L P ++ G K Sbjct: 544 VINITDSQA---DYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKE 600 Query: 411 VSDSKVEIKHR 421 +++ KV ++ R Sbjct: 601 IAEGKVAVRTR 611 >gi|229846781|ref|ZP_04466888.1| threonyl-tRNA synthetase [Haemophilus influenzae 7P49H1] gi|229810270|gb|EEP45989.1| threonyl-tRNA synthetase [Haemophilus influenzae 7P49H1] Length = 643 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTRPENRIGSD 431 >gi|148825906|ref|YP_001290659.1| threonyl-tRNA synthetase [Haemophilus influenzae PittEE] gi|166223344|sp|A5UBX5|SYT_HAEIE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148716066|gb|ABQ98276.1| threonyl-tRNA synthetase [Haemophilus influenzae PittEE] Length = 643 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTRPENRIGSD 431 >gi|327300907|ref|XP_003235146.1| glycyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326462498|gb|EGD87951.1| glycyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 654 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 10/128 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++ ++E ++ + +G++ +P +VAP K+ L+ + H + +++ Sbjct: 502 SFGIG--RILYCLMEHAYWSRPDDEARGVLSFPPAVAPTKVLLVPLSTHASF-QPLIQRL 558 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L ++G DD IG +++ D LG P + + V D+ ++ R T + Sbjct: 559 TLKLRRLGVSNRVDDSSASIGKRYSRNDELGTPFGITADFQSVKDNTFTLRDRDTTKQVR 618 Query: 429 MSLEEVIN 436 S +E+ N Sbjct: 619 ASEDEICN 626 Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171 +++PF I FR+E+ PR G++R REFLM + F + PEG K Sbjct: 236 QSMPFASACIGKSFRNEISPRSGLLRVREFLMAEIEHF-VDPEGGK 280 >gi|303253033|ref|ZP_07339186.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247204|ref|ZP_07529254.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648123|gb|EFL78326.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856262|gb|EFM88415.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 643 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 80/397 (20%), Positives = 142/397 (35%), Gaps = 48/397 (12%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + E+ P + LW +G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGDLS 207 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTRPENRIGDD-- 431 Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 + D E D + + + ++ I E A Y + Sbjct: 432 ----AMWDRTE-------DGLAKALTANGLSYE-------IQEGEGAFYGPKIEFALRDC 473 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLP--MSATFKGAD-GKDHYVQMGSYGIGAMRV 324 D R + G I ++LP + A++ D G+ V + +G++ Sbjct: 474 LD----------REWQCGTI---QLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIER 520 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 +I + G +P +AP + ++NI D +K+ LS G D Sbjct: 521 FIGIITEEYAG---FFPTWLAPTQAVVMNITDSQA---DYVQKVTKALSDAGIRAKSDLR 574 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++G + L P ++ G K + KV ++ R Sbjct: 575 NEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRTR 611 >gi|148826837|ref|YP_001291590.1| threonyl-tRNA synthetase [Haemophilus influenzae PittGG] gi|166223345|sp|A5UEK1|SYT_HAEIG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148718079|gb|ABQ99206.1| threonyl-tRNA synthetase [Haemophilus influenzae PittGG] Length = 643 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTRPENRIGSD 431 >gi|46446958|ref|YP_008323.1| prolyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] gi|81626837|sp|Q6MBK1|SYP_PARUW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|46400599|emb|CAF24048.1| putative prolyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] Length = 507 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Query: 101 DKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDA 160 ++ +I PT E ++ D F ++SYR+LP Q R E+RPR +R+ EFL ++ Sbjct: 117 EEPLIVRPTSETIIGDSFSRWVESYRDLPLLINQWANVVRWEMRPRI-FLRTTEFLWQEG 175 Query: 161 YSFDLTPEGSKHSYNKMFVSY 181 ++ T E + M Y Sbjct: 176 HTAHATHEEALQETMTMLEVY 196 >gi|221632630|ref|YP_002521851.1| prolyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] gi|221156093|gb|ACM05220.1| prolyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] Length = 484 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 15/155 (9%) Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 +FG + + TF +GK YV S+G+ + R + A++ D +G+ P VAP + Sbjct: 240 HFGKVFDI----TFLDREGKRRYVFNTSWGL-SHRTIGAMVMVHGDDRGLKLPPRVAPIQ 294 Query: 349 ISLINIKAHDQVCR------DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPL 402 + ++ I D+ R D + R +V D+ DD + G +F DL G P+ Sbjct: 295 VVIVPIWRKDEERRQVEETVDRVRAMLRRAVRVHADLR-DD--KTPGWKFNDWDLKGVPI 351 Query: 403 QVIVGSKFVSDSKVEIKHR-LTGIREDMSLEEVIN 436 ++ +G + V+ +V + R + G R+ + + ++ Sbjct: 352 RLEIGPRDVASDQVTLVRRDVLGQRQAVPIANLVG 386 Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 3/101 (2%) Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTP 167 PT E ++ +F ++SYR+LP Q R E RPR +R+ EFL ++ ++ T Sbjct: 114 PTSESIICPMFARWVQSYRDLPILINQWCSVVRWEERPR-AFLRTLEFLWQEGHTVHATL 172 Query: 168 EGSKHSYNKMFVSYLRIFH-RLGLKSIP-MRAESGPIGGDL 206 E ++ M Y L + IP + ES G L Sbjct: 173 EEAEERARLMLEVYRDFVESELAIPVIPGQKTESEKFAGAL 213 >gi|223995497|ref|XP_002287422.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220976538|gb|EED94865.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 517 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSF 163 +I PT E ++ ++F+ I S+R+LP Q R E+R R +R+ EFL ++ ++ Sbjct: 129 LIIRPTSETMIWNMFKKWIVSHRDLPLKMNQWANVMRWEMRTR-PFLRTSEFLWQEGHTA 187 Query: 164 DLTPEGSKHSYNKMFVSYLRIFHRL 188 T EG+ M Y + L Sbjct: 188 HATSEGALEDSKLMLDQYAEMCQNL 212 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 9/162 (5%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 ++ G + G + TF+ A+GK V S+G+ + R++ A+I + D G++ Sbjct: 246 ALQSGTSHFLGQSFGKAFDVTFQDAEGKQQDVWGTSWGV-STRLIGALIMTHSDDAGLVL 304 Query: 341 --PDSVAPFKISLINIKAHDQ----VCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFA 393 + + I K +D+ +A +K+ A L G V DD + G+++ Sbjct: 305 PPRVAPVQVVVVPIPPKKNDEEGKVALNNALDKMVANLKSAGLKVKVDDRDYVRNGAKYF 364 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRL-TGIREDMSLEEV 434 + G PL++ +G + V K+R+ +E +SL+EV Sbjct: 365 EWERKGVPLRIELGPRDVKGGVCVFKYRVGKEEKETVSLDEV 406 >gi|145631389|ref|ZP_01787160.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021] gi|144983048|gb|EDJ90552.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021] Length = 643 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTRPENRIGSD 431 >gi|312865429|ref|ZP_07725656.1| serine--tRNA ligase [Streptococcus downei F0415] gi|311098947|gb|EFQ57164.1| serine--tRNA ligase [Streptococcus downei F0415] Length = 425 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 22/179 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R A++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGAKVTGSRFLFYKGLGARLERAIYNFM------LD--------EHAKEGYTEVIPPYMV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ LAD +D +I PT E +T+ +R I + +P F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELAD-SDYVLI--PTAEVPLTNYYRGEILDGKEMPVYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPETSYEELEKMTANAENILQKLNL 314 >gi|222153600|ref|YP_002562777.1| seryl-tRNA synthetase [Streptococcus uberis 0140J] gi|254783494|sp|B9DVD8|SYS_STRU0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|222114413|emb|CAR43194.1| seryl-tRNA synthetase [Streptococcus uberis 0140J] Length = 425 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 8/136 (5%) Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 +E + G E+ P + + D +G+Y + ++ L D N + PT E +T+ + Sbjct: 183 DEHAKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELKDSN---FVLIPTAEVPLTNYY 239 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 R I ++LP F + FR E R G++R +F + F PE S Sbjct: 240 RGEILDGKDLPINFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEEL 298 Query: 175 NKMFVSYLRIFHRLGL 190 KM + I +L L Sbjct: 299 EKMTANAENILQKLNL 314 >gi|260582696|ref|ZP_05850484.1| threonyl-tRNA synthetase [Haemophilus influenzae NT127] gi|260094262|gb|EEW78162.1| threonyl-tRNA synthetase [Haemophilus influenzae NT127] Length = 643 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTRPENRIGSD 431 >gi|145636075|ref|ZP_01791745.1| threonyl-tRNA synthetase [Haemophilus influenzae PittHH] gi|229844174|ref|ZP_04464315.1| threonyl-tRNA synthetase [Haemophilus influenzae 6P18H1] gi|145270597|gb|EDK10530.1| threonyl-tRNA synthetase [Haemophilus influenzae PittHH] gi|229813168|gb|EEP48856.1| threonyl-tRNA synthetase [Haemophilus influenzae 6P18H1] Length = 643 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTRPENRIGSD 431 >gi|162452628|ref|YP_001614995.1| hypothetical protein sce4352 [Sorangium cellulosum 'So ce 56'] gi|161163210|emb|CAN94515.1| thrS [Sorangium cellulosum 'So ce 56'] Length = 753 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 16/178 (8%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE-----MS 70 +DA++ H + + G+ WLP G + I E+Q R +E + Sbjct: 357 KDADVEVH---FEPHFVEEIGAGLVMWLPKG-----GLLRTIIEDQWRKMHLEEGYDIVY 408 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ADLW SG +D Y + M + P + + +S +SYR P Sbjct: 409 SPHIAKADLWKTSGHWDFYREGMFSPMSVDGHDYCCKPMNCPFHILMVKSRTRSYREFPM 468 Query: 131 TFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTP--EGSKHSYNKMFVSYLRIF 185 ++ +R E G+MR R F DA+ F E H + + LR F Sbjct: 469 RLAELGTVYRYEAAGVMHGLMRVRGFTQDDAHLFCRADQVEQEIHRVLRFILKMLRTF 526 >gi|149007999|ref|ZP_01831556.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|225856139|ref|YP_002737650.1| seryl-tRNA synthetase [Streptococcus pneumoniae P1031] gi|225858264|ref|YP_002739774.1| seryl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|254783048|sp|C1C5E8|SYS_STRP7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783496|sp|C1CIR2|SYS_STRZP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|147760511|gb|EDK67487.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|225721092|gb|ACO16946.1| seryl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|225725287|gb|ACO21139.1| seryl-tRNA synthetase [Streptococcus pneumoniae P1031] gi|332076855|gb|EGI87317.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA17545] gi|332204437|gb|EGJ18502.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA47901] Length = 424 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 22/192 (11%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 R ++ + + G+ + + IY+++ LD E + G E+ P + Sbjct: 154 RGGKVTGARFLFYKGLGARLERAIYNFM------LD--------EHGKEGYTEVITPYIV 199 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + D +G+Y + ++ L+D N + PT E + + +R I ++LP F + Sbjct: 200 NHDSMFGTGQYPKFKEDTFELSDTN---FVLIPTAEVPLANYYRDEILDGKDLPIYFTAM 256 Query: 136 QLKFRDEL----RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 FR E R G++R +F + F PE S KM + I +L L Sbjct: 257 SPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKF-AKPEESYEELEKMTANAENILQKLNLP 315 Query: 192 SIPMRAESGPIG 203 + +G +G Sbjct: 316 YRVVALSTGDMG 327 >gi|302664275|ref|XP_003023770.1| hypothetical protein TRV_02082 [Trichophyton verrucosum HKI 0517] gi|291187783|gb|EFE43152.1| hypothetical protein TRV_02082 [Trichophyton verrucosum HKI 0517] Length = 1327 Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 10/128 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++ ++E ++ + +G++ +P +VAP K+ L+ + H + +++ Sbjct: 502 SFGIG--RILYCLMEHAYWSRPDDEARGVLSFPPAVAPTKVLLVPLSTHASF-QPLIQRL 558 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L ++G DD IG +++ D LG P + + V D+ ++ R T + Sbjct: 559 TLKLRRLGVSNRVDDSSASIGKRYSRNDELGTPFGITADFQSVKDNTFTLRDRDTTKQVR 618 Query: 429 MSLEEVIN 436 S +E+ N Sbjct: 619 ASEDEICN 626 Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171 +++PF I FR+E+ PR G++R REFLM + F + PEG K Sbjct: 236 QSMPFASACIGKSFRNEISPRSGLLRVREFLMAEIEHF-VDPEGGK 280 >gi|302505475|ref|XP_003014444.1| hypothetical protein ARB_07006 [Arthroderma benhamiae CBS 112371] gi|291178265|gb|EFE34055.1| hypothetical protein ARB_07006 [Arthroderma benhamiae CBS 112371] Length = 1327 Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 10/128 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++ ++E ++ + +G++ +P +VAP K+ L+ + H + +++ Sbjct: 502 SFGIG--RILYCLMEHAYWSRPDDEARGVLSFPPAVAPTKVLLVPLSTHASF-QPLIQRL 558 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L ++G DD IG +++ D LG P + + V D+ ++ R T + Sbjct: 559 TLKLRRLGVSNRVDDSSASIGKRYSRNDELGTPFGITADFQSVKDNTFTLRDRDTTKQVR 618 Query: 429 MSLEEVIN 436 S +E+ N Sbjct: 619 ASEDEICN 626 Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171 +++PF I FR+E+ PR G++R REFLM + F + PEG K Sbjct: 236 QSMPFASACIGKSFRNEISPRSGLLRVREFLMAEIEHF-VDPEGGK 280 >gi|68250118|ref|YP_249230.1| threonyl-tRNA synthetase [Haemophilus influenzae 86-028NP] gi|81335458|sp|Q4QK77|SYT_HAEI8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|68058317|gb|AAX88570.1| threonyl-tRNA synthetase [Haemophilus influenzae 86-028NP] Length = 643 Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTRPENRIGSD 431 >gi|309973051|gb|ADO96252.1| Threonyl-tRNA synthetase [Haemophilus influenzae R2846] Length = 643 Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + +R + + E+ P + LW ++G + +Y Sbjct: 256 MQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYAD 315 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVM 150 M N + I P + IF +KSYR+LP + R+E G+M Sbjct: 316 LMFTTQSENREYAI-KPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLM 374 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---IGGD 205 R R F DA+ F T + + I+ G +I ++ + P IG D Sbjct: 375 RVRGFTQDDAHIF-CTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTRPENRIGSD 431 >gi|326481313|gb|EGE05323.1| glycyl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 654 Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 10/128 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++ ++E ++ + +G++ +P +VAP K+ L+ + H + +++ Sbjct: 502 SFGIG--RILYCLMEHAYWSRPDDEARGVLSFPPAVAPTKVLLVPLSTHASF-QPLIQRL 558 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L ++G DD IG +++ D LG P + + V D+ ++ R T + Sbjct: 559 TLKLRRLGVSNRVDDSSASIGKRYSRNDELGTPFGITADFQSVKDNTFTLRDRDTTKQVR 618 Query: 429 MSLEEVIN 436 S +E+ N Sbjct: 619 ASEDEICN 626 Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171 +++PF I FR+E+ PR G++R REFLM + F + PEG K Sbjct: 236 QSMPFASACIGKSFRNEISPRSGLLRVREFLMAEIEHF-VDPEGGK 280 >gi|326468704|gb|EGD92713.1| glycyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 654 Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 10/128 (7%) Query: 316 SYGIGAMRVVAAVIESSH------DGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKI 368 S+GIG R++ ++E ++ + +G++ +P +VAP K+ L+ + H + +++ Sbjct: 502 SFGIG--RILYCLMEHAYWSRP