RPSBLAST alignment for GI: 254780871 and conserved domain: TIGR01188

>gnl|CDD|130256 TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. Length = 302
 Score = 94.4 bits (235), Expect = 2e-20
 Identities = 55/204 (26%), Positives = 104/204 (50%), Gaps = 7/204 (3%)

Query: 23  FPVLENVHLSLKKGEIVALVSPSGTGKSTILHIAGLLEVPDQGNVIIANQLCNKLSDDKK 82
           F  ++ V+  +++GE+   + P+G GK+T + +   L  P  G   +A    + + + +K
Sbjct: 6   FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGY--DVVREPRK 63

Query: 83  SFLRCSKIGFVYQEHRLLMDFSVIENIIFPQIIAGINHKTAYQRAMDLLSYMDMSQYANR 142
             +R S IG V Q   +  D +  EN+     + G+    A +RA +LL   ++ + A+R
Sbjct: 64  --VRRS-IGIVPQYASVDEDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGEAADR 120

Query: 143 RSSDISGGEQQRVAICRAIANKPLIILADEPTGNLDLKTAQQVFSILKYLVVRSGLAALI 202
                SGG ++R+ I  ++ ++P ++  DEPT  LD +T + ++  ++ L    G+  L+
Sbjct: 121 PVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRAL-KEEGVTILL 179

Query: 203 ATHNHDLASQM-DRQITIRDGMIA 225
            TH  + A ++ DR   I  G I 
Sbjct: 180 TTHYMEEADKLCDRIAIIDHGRII 203