RPSBLAST alignment for GI: 254780871 and conserved domain: TIGR01257
>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272
Score = 46.5 bits (110), Expect = 5e-06
Identities = 45/217 (20%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 2 DSAEVLLLQNVKHSYRQVGKPFPVLENVHLSLKKGEIVALVSPSGTGKSTILHIAGLLEV 61
+ ++L L + Y G P ++ + + ++ GE L+ +G GK+T +
Sbjct: 1933 NKTDILRLNELTKVYS--GTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT 1990
Query: 62 PDQGNVIIANQLCNKLSDDKKSFLRCSKIGFVYQEHRLLMDFSVIENIIFPQIIAGINHK 121
G+ +A KS L + I V+Q F I++++ G H
Sbjct: 1991 VTSGDATVAG----------KSIL--TNISDVHQNMGYCPQFDAIDDLL-----TGREHL 2033
Query: 122 TAYQRAMDL------------LSYMDMSQYANRRSSDISGGEQQRVAICRAIANKPLIIL 169
Y R + + + +S YA+R + SGG +++++ A+ P ++L
Sbjct: 2034 YLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLVL 2093
Query: 170 ADEPTGNLDLKTAQQVFSILKYLVVRSGLAALIATHN 206
DEPT +D + + +++ + ++R G A ++ +H+
Sbjct: 2094 LDEPTTGMDPQARRMLWNTI-VSIIREGRAVVLTSHS 2129