RPSBLAST alignment for GI: 254780871 and conserved domain: cd03248

>gnl|CDD|73007 cd03248, ABCC_TAP, TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.. Length = 226
 Score = 84.2 bits (208), Expect = 3e-17
 Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 15/222 (6%)

Query: 9   LQNVKHSYRQVGKP-FPVLENVHLSLKKGEIVALVSPSGTGKSTILHIAGLLEVPDQGNV 67
            QNV  +Y    +P   VL++V  +L  GE+ ALV PSG+GKST++ +      P  G V
Sbjct: 14  FQNVTFAYPT--RPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQV 71

Query: 68  IIANQLCNKLSDDKKSFLRCSKIGFVYQEHRLLMDFSVIENIIFPQIIAGINHKTAYQR- 126
           ++  +    +S  +  +L  SK+  V QE  +L   S+ +NI +              + 
Sbjct: 72  LLDGK---PISQYEHKYLH-SKVSLVGQE-PVLFARSLQDNIAYGLQSCSFECVKEAAQK 126

Query: 127 --AMDLLSYMDMSQY--ANRRSSDISGGEQQRVAICRAIANKPLIILADEPTGNLDLKTA 182
             A   +S +          + S +SGG++QRVAI RA+   P +++ DE T  LD ++ 
Sbjct: 127 AHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESE 186

Query: 183 QQVFSILKYLVVRSGLAALIATHNHDLASQMDRQITIRDGMI 224
           QQV   L     R  +  L+  H      + D+ + +  G I
Sbjct: 187 QQVQQALYDWPERRTV--LVIAHRLSTVERADQILVLDGGRI 226