RPSBLAST alignment for GI: 254780871 and conserved domain: cd03270

>gnl|CDD|73029 cd03270, ABC_UvrA_I, The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.. Length = 226
 Score = 38.2 bits (89), Expect = 0.002
 Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 43/219 (19%)

Query: 26  LENVHLSLKKGEIVALVSPSGTGKSTIL---------------------HIAGLLEVPDQ 64
           L+NV + + + ++V +   SG+GKS++                         G ++ PD 
Sbjct: 11  LKNVDVDIPRNKLVVITGVSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDV 70

Query: 65  GNVIIANQLCNKLSDDKKSFLRC--SKIGFVYQEHRLLMDFSVIENIIFPQIIAGINHKT 122
            ++     L   ++ D+K+  R   S +G V + +  L        ++F ++  GI  + 
Sbjct: 71  DSI---EGLSPAIAIDQKTTSRNPRSTVGTVTEIYDYL-------RLLFARV--GIRERL 118

Query: 123 AYQRAMDLLSYMDMSQYANRRSSDISGGEQQRVAICRAIANK--PLIILADEPTGNLDLK 180
            +   + L  Y+ +S    R +  +SGGE QR+ +   I +    ++ + DEP+  L  +
Sbjct: 119 GFLVDVGL-GYLTLS----RSAPTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHPR 173

Query: 181 TAQQVFSILKYLVVRSGLAALIATHNHDLASQMDRQITI 219
              ++   LK L    G   L+  H+ D     D  I I
Sbjct: 174 DNDRLIETLKRL-RDLGNTVLVVEHDEDTIRAADHVIDI 211