HHsearch alignment for GI: 254780872 and conserved domain: COG0287
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism].
Probab=90.58 E-value=0.99 Score=25.19 Aligned_cols=87 Identities=20% Similarity=0.275 Sum_probs=54.4
Q ss_pred CCEEEECCC--HHHHHHHHHHCCCCE--EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCCHHHHEECCCHH
Q ss_conf 628885698--569999997319816--9952135677888865310112111122100123-21115301300124310
Q gi|254780872|r 68 LRILDLGCG--GGLLSEPMAQMGATV--TGIDPSTKNIAIAKNHANMKNINIDYRVSCAEEI-AETDEKFDIILNMEVIE 142 (254)
Q Consensus 68 ~~VLDiGCG--~G~~s~~la~~g~~V--~giD~S~~~i~~Ak~~a~~~~~~i~~~~~~~~~l-~~~~~~FD~V~~~~vle 142 (254)
T Consensus 4 ~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~----lg--v~d~~~--~~~~~~~~~~aDlVivavPi- 74 (279)
T COG0287 4 MKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALE----LG--VIDELT--VAGLAEAAAEADLVIVAVPI- 74 (279)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH----CC--CCHHHC--CCHHHHHCCCCCEEEEECCH-
T ss_conf 4899987746779999999976984799724774677877663----58--530100--11555413569989995778-
Q ss_pred CCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf 26888899888875213332157
Q gi|254780872|r 143 HVDNIPYFIKTCCSLLLSNGLMF 165 (254)
Q Consensus 143 Hv~d~~~~l~~~~~~LkpgG~li 165 (254)
T Consensus 75 --~~~~~~l~~l~~~l~~g~iv~ 95 (279)
T COG0287 75 --EATEEVLKELAPHLKKGAIVT 95 (279)
T ss_pred --HHHHHHHHHHCCCCCCCCEEE
T ss_conf --899999998630379998897