HHsearch alignment for GI: 254780872 and conserved domain: COG0742
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair].
Probab=97.98 E-value=4.8e-05 Score=51.97 Aligned_cols=118 Identities=15% Similarity=0.175 Sum_probs=76.4
Q ss_pred HHHHHHHHCCCCCCCCCCHHHCCEEEECCCHHHHHH-HHHHCCCCEEEECCHHHHHHHHHHHHHCCC--CCCCCCCCCCC
Q ss_conf 999988651876444588001628885698569999-997319816995213567788886531011--21111221001
Q gi|254780872|r 47 IQDKIMQHFQCKSDDTHPFKGLRILDLGCGGGLLSE-PMAQMGATVTGIDPSTKNIAIAKNHANMKN--INIDYRVSCAE 123 (254)
Q Consensus 47 I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~G~~s~-~la~~g~~V~giD~S~~~i~~Ak~~a~~~~--~~i~~~~~~~~ 123 (254)
T Consensus 29 VREalFNil~~~-----~i~g~~~LDlFAGSGaLGlEAlSRGA~~~~~vE~~~~a~~~l~~N~~~l~~~~~~~~~~~da~ 103 (187)
T COG0742 29 VREALFNILAPD-----EIEGARVLDLFAGSGALGLEALSRGAARVVFVEKDRKAVKILKENLKALGLEGEARVLRNDAL 103 (187)
T ss_pred HHHHHHHHCCCC-----CCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECHH
T ss_conf 889999873434-----457988999468764768999857885699996598999999999998487612599840089
Q ss_pred CC-CCCCC--CHHHHEECCCHHC-CCCHHHHHHH--HHHHCCCCCEEEEECC
Q ss_conf 23-21115--3013001243102-6888899888--8752133321577436
Q gi|254780872|r 124 EI-AETDE--KFDIILNMEVIEH-VDNIPYFIKT--CCSLLLSNGLMFISTI 169 (254)
Q Consensus 124 ~l-~~~~~--~FD~V~~~~vleH-v~d~~~~l~~--~~~~LkpgG~liist~ 169 (254)
T Consensus 104 ~~L~~~~~~~~FDlVflDPPy~~~l~~~~~~~~~~~~~~~L~~~~~iv~E~~ 155 (187)
T COG0742 104 RALKQLGTREPFDLVFLDPPYAKGLLDKELALLLLEENGWLKPGALIVVEHD 155 (187)
T ss_pred HHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEC
T ss_conf 9987227788512899689975360668999988876587788968999827