HHsearch alignment for GI: 254780872 and conserved domain: PRK08229

Probab=94.31  E-value=0.38  Score=27.76  Aligned_cols=94  Identities=18%  Similarity=0.100  Sum_probs=57.9

Q ss_pred             CCEEEECCC--HHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCC----------CCCCCCCCCCCHHHH
Q ss_conf             628885698--56999999731981699521356778888653101121111221----------001232111530130
Q gi|254780872|r   68 LRILDLGCG--GGLLSEPMAQMGATVTGIDPSTKNIAIAKNHANMKNINIDYRVS----------CAEEIAETDEKFDII  135 (254)
Q Consensus        68 ~~VLDiGCG--~G~~s~~la~~g~~V~giD~S~~~i~~Ak~~a~~~~~~i~~~~~----------~~~~l~~~~~~FD~V  135 (254)
T Consensus         3 mkI~IiGaGAvG~~~a~~L~~aG~~V~lv~r~~~-~~~i----~~~Gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v   77 (341)
T PRK08229          3 ARICVLGAGSIGCYLGGRLAAAGADVTLIGRARI-GDEI----RAHGLRLTDYRGRDVRVPPDAIAFSTDPAALATADLV   77 (341)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEECHHH-HHHH----HHCCCEEECCCCCEEEECCCEEEECCCHHHCCCCCEE
T ss_conf             7799989679999999999858998799956789-9999----9679099638997689636615614886565899989


Q ss_pred             EECCCHHCCCCHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf             01243102688889988887521333215774367
Q gi|254780872|r  136 LNMEVIEHVDNIPYFIKTCCSLLLSNGLMFISTIN  170 (254)
Q Consensus       136 ~~~~vleHv~d~~~~l~~~~~~LkpgG~liist~N  170 (254)
T Consensus        78 iv~vK---a~~~~~a~~~l~~~l~~~t~il-~lQN  108 (341)
T PRK08229         78 LVTVK---SAATADAAAALAGHARPGAVVV-SFQN  108 (341)
T ss_pred             EEEEC---CCCHHHHHHHHHHHCCCCCEEE-EEEC
T ss_conf             99707---5788999999986438996899-9504