HHsearch alignment for GI: 254780872 and conserved domain: PRK11188

Probab=98.29  E-value=4.6e-06  Score=58.24  Aligned_cols=111  Identities=18%  Similarity=0.271  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHC-C--CCEEEECCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             56599999998865187644458800162888569856999999731-9--81699521356778888653101121111
Q gi|254780872|r   41 PVRIKYIQDKIMQHFQCKSDDTHPFKGLRILDLGCGGGLLSEPMAQM-G--ATVTGIDPSTKNIAIAKNHANMKNINIDY  117 (254)
Q Consensus        41 ~~R~~~I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~G~~s~~la~~-g--~~V~giD~S~~~i~~Ak~~a~~~~~~i~~  117 (254)
T Consensus        32 RsRaafKL~EId~K~~l~~------~~~~VlDLGaAPG~WsQva~~~~~~~g~VigVDl~~~~----------pi~gv~~   95 (209)
T PRK11188         32 RSRAWFKLDEIQQSDKLFK------PGMTVVDLGAAPGGWSQYAVTQIGDKGRVIACDILPMD----------PIVGVDF   95 (209)
T ss_pred             HHHHHHHHHHHHHHHCCCC------CCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCC----------CCCCCEE
T ss_conf             7899997999998856457------89989980689975789999973999739998653045----------3789676


Q ss_pred             CCCCCCCCC--------CCCCCHHHHEECCCHHCC-----CC-------HHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             221001232--------111530130012431026-----88-------8899888875213332157743
Q gi|254780872|r  118 RVSCAEEIA--------ETDEKFDIILNMEVIEHV-----DN-------IPYFIKTCCSLLLSNGLMFIST  168 (254)
Q Consensus       118 ~~~~~~~l~--------~~~~~FD~V~~~~vleHv-----~d-------~~~~l~~~~~~LkpgG~liist  168 (254)
T Consensus        96 i~gDi~~~~~~~~i~~~~~~~~~DvVlSDmA-Pn~tG~~~~D~~~s~~L~~~al~~a~~~Lk~gG~fv~K~  165 (209)
T PRK11188         96 LQGDFRDELVLKALLERVGDSKVDVVMSDMA-PNMSGTPAVDIPRAMYLVELALDMCRQVLAPGGSFVVKV  165 (209)
T ss_pred             ECCCCCCHHHHHHHHHHHCCCCCCEEECCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             4034458899999999858987308966666-566787033599999999999999998626798899999