HHsearch alignment for GI: 254780872 and conserved domain: pfam02558
>pfam02558 ApbA Ketopantoate reductase PanE/ApbA. This is a family of 2-dehydropantoate 2-reductases also known as ketopantoate reductases, EC:1.1.1.169. The reaction catalysed by this enzyme is: (R)-pantoate + NADP(+) <= 2-dehydropantoate + NADPH. AbpA catalyses the NADPH reduction of ketopantoic acid to pantoic acid in the alternative pyrimidine biosynthetic (APB) pathway. ApbA and PanE are allelic. ApbA, the ketopantoate reductase enzyme is required for the synthesis of thiamine via the APB biosynthetic pathway.
Probab=94.46 E-value=0.2 Score=29.50 Aligned_cols=89 Identities=21% Similarity=0.265 Sum_probs=54.0
Q ss_pred EEEECCC--HHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCC-------CCCCCCCCCCCCHHHHEECCC
Q ss_conf 8885698--5699999973198169952135677888865310112111122-------100123211153013001243
Q gi|254780872|r 70 ILDLGCG--GGLLSEPMAQMGATVTGIDPSTKNIAIAKNHANMKNINIDYRV-------SCAEEIAETDEKFDIILNMEV 140 (254)
Q Consensus 70 VLDiGCG--~G~~s~~la~~g~~V~giD~S~~~i~~Ak~~a~~~~~~i~~~~-------~~~~~l~~~~~~FD~V~~~~v 140 (254)
T Consensus 1 I~IiGaGaiG~~~a~~L~~ag~~V~lv~R~~~-~~~i----~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~-v 74 (150)
T pfam02558 1 IAILGAGAVGSLYGARLARAGHDVTLIARGRH-LEAI----RENGLRITSPGGERTVPPPVATSASEELGPADLVIVA-V 74 (150)
T ss_pred CEEECCCHHHHHHHHHHHHCCCEEEEEECCCH-HHHH----HHCCEEEEECCCCEEEECCEECCCHHHCCCCCEEEEE-E
T ss_conf 99996689999999999977992899975636-7887----7497699947983898074103865765886799997-2
Q ss_pred HHCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 10268888998888752133321577
Q gi|254780872|r 141 IEHVDNIPYFIKTCCSLLLSNGLMFI 166 (254)
Q Consensus 141 leHv~d~~~~l~~~~~~LkpgG~lii 166 (254)
T Consensus 75 --Ka~~~~~al~~l~~~l~~~t~iv~ 98 (150)
T pfam02558 75 --KAYQTAEALEDLAPLLGPNTVVLL 98 (150)
T ss_pred --CCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf --245889999998865288838999