HHsearch alignment for GI: 254780872 and conserved domain: pfam03602

Probab=98.52  E-value=4.7e-07  Score=64.39  Aligned_cols=119  Identities=19%  Similarity=0.267  Sum_probs=78.3

Q ss_pred             HHHHHHHHCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHCC-CCEEEECCHHHHHHHHHHHHHCCCCCCC-CCCCCCC-
Q ss_conf             999988651876444588001628885698569999997319-8169952135677888865310112111-1221001-
Q gi|254780872|r   47 IQDKIMQHFQCKSDDTHPFKGLRILDLGCGGGLLSEPMAQMG-ATVTGIDPSTKNIAIAKNHANMKNINID-YRVSCAE-  123 (254)
Q Consensus        47 I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~G~~s~~la~~g-~~V~giD~S~~~i~~Ak~~a~~~~~~i~-~~~~~~~-  123 (254)
T Consensus        28 vrEalFniL~~~----~~i~~~~~LDLFaGSGslglEAlSRGA~~v~fvE~~~~a~~~i~~N~~~l~~~~~~~~~~~~~~  103 (181)
T pfam03602        28 VREALFNILAPY----FELGGARVLDLFAGSGALGLEALSRGASSVVFVEKDKKAVATLKENLEALGLEGAVLRMDAARA  103 (181)
T ss_pred             HHHHHHHHHCCC----CCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCHHHH
T ss_conf             999999750134----5548987998278726989999976998899996999999999999998589977998108999


Q ss_pred             --CCCCCCCCHHHHEECCCHHCCCCHHHHHHHHH--HHCCCCCEEEEECCC
Q ss_conf             --23211153013001243102688889988887--521333215774367
Q gi|254780872|r  124 --EIAETDEKFDIILNMEVIEHVDNIPYFIKTCC--SLLLSNGLMFISTIN  170 (254)
Q Consensus       124 --~l~~~~~~FD~V~~~~vleHv~d~~~~l~~~~--~~LkpgG~liist~N  170 (254)
T Consensus       104 ~~~~~~~~~~fdiIF~DPPY-~~~~~~~~l~~l~~~~~l~~~~iiiiE~~~  153 (181)
T pfam03602       104 LLRLAGKGPPFDLVFLDPPY-AKGLIEEALELLAEKGWLNPNALIVVETES  153 (181)
T ss_pred             HHHHCCCCCCCCEEECCCCC-CCHHHHHHHHHHHHCCCCCCCEEEEEEECC
T ss_conf             98753357888766359975-420699999999966665798099999668