HHsearch alignment for GI: 254780872 and conserved domain: pfam08123
>pfam08123 DOT1 Histone methylation protein DOT1. The DOT1 domain regulates gene expression by methylating histone H3. H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast.
Probab=97.62 E-value=0.00025 Score=47.49 Aligned_cols=137 Identities=16% Similarity=0.205 Sum_probs=81.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEECCCHHHHHHHH-HHCC
Q ss_conf 898899999999988746888871267751756599999998865187644458800162888569856999999-7319
Q gi|254780872|r 10 TKNQDAINQFSNIASEWWEPTGKFKPLHQINPVRIKYIQDKIMQHFQCKSDDTHPFKGLRILDLGCGGGLLSEPM-AQMG 88 (254)
Q Consensus 10 t~~~~ei~~F~~~a~~WwD~~g~~~~Lh~~N~~R~~~I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~G~~s~~l-a~~g 88 (254)
T Consensus 6 ~p~~~~L~~Y~~fs~~v---YGEl------lp---~fis~ii~~-~~l~-------~~dvF~DLGSGVGnvv~QaAl~tg 65 (205)
T pfam08123 6 SPDANKLNHYKAFSNEV---YGEL------LP---EFLSDVLDK-CNLG-------PQDVFVDLGSGVGNCVLQAALEFG 65 (205)
T ss_pred CCCHHHHCCCCCCCCCC---CCCC------CH---HHHHHHHHH-HCCC-------CCCEEEECCCCCCHHHHHHHHHHC
T ss_conf 69967860678999755---1135------88---999999998-3989-------768899858883299999998709
Q ss_pred CC-EEEECCHHHHHHHHHH-------HHHC---CCCCCCCCCCCCCCCCCCC---CCHHHHEECCCHHCCCCHHHHHHHH
Q ss_conf 81-6995213567788886-------5310---1121111221001232111---5301300124310268888998888
Q gi|254780872|r 89 AT-VTGIDPSTKNIAIAKN-------HANM---KNINIDYRVSCAEEIAETD---EKFDIILNMEVIEHVDNIPYFIKTC 154 (254)
Q Consensus 89 ~~-V~giD~S~~~i~~Ak~-------~a~~---~~~~i~~~~~~~~~l~~~~---~~FD~V~~~~vleHv~d~~~~l~~~ 154 (254)
T Consensus 66 c~~s~GiEi~~~~a~~A~~~~~~~~~~~~~~G~~~~~~~l~~gdFl~~~~~~~~~~~a~VI~vNN~~F-~~~Ln~~L~e~ 144 (205)
T pfam08123 66 CKLSFGCEIMDNASNLAELQDEEFKKRCKLFGKKLGKIEFIRGSFLDNERVEEIIPEADVILVNNFAF-DPELNLQLKEM 144 (205)
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCEEEEECCCC-CHHHHHHHHHH
T ss_conf 65388888656689999999999999999958876873899777788588998634798899943246-98899999999
Q ss_pred HHHCCCCCEEEEEC
Q ss_conf 75213332157743
Q gi|254780872|r 155 CSLLLSNGLMFIST 168 (254)
Q Consensus 155 ~~~LkpgG~liist 168 (254)
T Consensus 145 f~~lk~GtkI-VS~ 157 (205)
T pfam08123 145 LQDLKDGCKI-ISL 157 (205)
T ss_pred HHCCCCCCEE-EEC
T ss_conf 9729998889-977