HHsearch alignment for GI: 254780872 and conserved domain: pfam11968
>pfam11968 DUF3321 Protein of unknown function (DUF3321). This family is conserved in fungi and is annotated as being a nucleolar protein.
Probab=98.18 E-value=1.6e-05 Score=54.92 Aligned_cols=116 Identities=21% Similarity=0.289 Sum_probs=78.9
Q ss_pred CCEEEECCCHHHHHHHHHHCC-CCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--C-CCCCCHHHHEECCCHHC
Q ss_conf 628885698569999997319-8169952135677888865310112111122100123--2-11153013001243102
Q gi|254780872|r 68 LRILDLGCGGGLLSEPMAQMG-ATVTGIDPSTKNIAIAKNHANMKNINIDYRVSCAEEI--A-ETDEKFDIILNMEVIEH 143 (254)
Q Consensus 68 ~~VLDiGCG~G~~s~~la~~g-~~V~giD~S~~~i~~Ak~~a~~~~~~i~~~~~~~~~l--~-~~~~~FD~V~~~~vleH 143 (254)
T Consensus 54 lr~LEVGALst~N~--~S~~~~~dv~rIDLnSq~------------p~I--~qqDFmerPlP~~e~e~F~iISlSLVLNf 117 (220)
T pfam11968 54 LRALEVGALSTKNA--CSKSGLFDVTRIDLNSQE------------PGI--LQQDFMERPLPKDESEKFDIISLSLVLNF 117 (220)
T ss_pred CEEEEECCCCCCCH--HCCCCEEEEEEEECCCCC------------CCC--HHHHHHHCCCCCCCCCCCCEEEEEEEEEC
T ss_conf 31775545564212--225674777885258999------------871--44324407788883114135888777741
Q ss_pred CCCHH---HHHHHHHHHCCCCCE-----EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHCCC
Q ss_conf 68888---998888752133321-----5774367660245641565543104678998571225388999999998698
Q gi|254780872|r 144 VDNIP---YFIKTCCSLLLSNGL-----MFISTINRNLKAMLLAIIGAEYLLQWLPKGTHQYDKFIKPTEMECFLAANKV 215 (254)
Q Consensus 144 v~d~~---~~l~~~~~~LkpgG~-----liist~Nr~~~s~~~~i~~ae~il~~~P~gtH~~~~Fi~p~el~~~l~~~g~ 215 (254)
T Consensus 118 VP~~~~RGeML~r~~~fL~~~~~~~~~~lFlVL----------------------PlpCv~NSRY~~~~~l~~im~slGf 175 (220)
T pfam11968 118 VPDPADRGEMLKRTTKFLRPPGPGSPPSLFLVL----------------------PLPCVTNSRYMDEERLQAIMSSLGF 175 (220)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE----------------------EHHHHHCCCCCCHHHHHHHHHHCCC
T ss_conf 698788869999999971799766663268873----------------------2456404400199999999996795
Q ss_pred EEEEEE
Q ss_conf 388855
Q gi|254780872|r 216 KIIDRV 221 (254)
Q Consensus 216 ~~~~~~ 221 (254)
T Consensus 176 ~~~~~k 181 (220)
T pfam11968 176 VLVKSK 181 (220)
T ss_pred EEEEEE
T ss_conf 588764