HHsearch alignment for GI: 254780873 and conserved domain: COG0528
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism].
Probab=99.95 E-value=1.3e-26 Score=198.99 Aligned_cols=220 Identities=25% Similarity=0.341 Sum_probs=175.3
Q ss_pred CCEEEEEECCCCCC-------CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 96699960858458-------88999999999999996799889998068730489999999861489988999999831
Q gi|254780873|r 1 MARIVMKFGGTSVA-------NIDCIRSAALHVKREVDRGQEVAMVVSAMSGETDRLAELCRQVTSIDNARERDVVISTG 73 (411)
Q Consensus 1 M~~iV~KfGGtSv~-------~~~~i~~v~~~i~~~~~~g~~~ivVvSA~~g~Td~L~~l~~~~~~~~~~~~~d~i~s~G 73 (411)
T Consensus 5 ~~rillkLsGe~l~g~~~~gid~~~i~~~a~~i~~~~~~g~eV~iVvG--GGni--~Rg~~~~~-~g~~r~~~D~mGmla 79 (238)
T COG0528 5 YMRILLKLSGEALAGEQGFGIDPEVLDRIANEIKELVDLGVEVAVVVG--GGNI--ARGYIGAA-AGMDRVTADYMGMLA 79 (238)
T ss_pred EEEEEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC--CCHH--HHHHHHHH-CCCCHHHHHHHHHHH
T ss_conf 379999942103647888887989999999999999866968999978--9789--97678987-698512246888999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCEEEECCCCC
Q ss_conf 29999999999984399863567332455121335520001236210033431068058603433355684244306862
Q gi|254780873|r 74 EQVSSGLMVLALQSLGIQAISLQGWQIPIMTDSLHGMARICRVDEKKIVTHLKKKQVVVITGFQGLSHDNSVTTLGRGGS 153 (411)
Q Consensus 74 E~~s~~l~a~~l~~~G~~a~~l~~~~~~i~t~~~~~~a~~~~~~~~~l~~~l~~~~v~v~~Gf~g~~~~g~~ttlgRGGS 153 (411)
T Consensus 80 TvmNal~L~~aL~~~~~~~~v~sai~~~~~~---------e~~~~~~A~~~l~~grVvIf~gG---tg~P~fTT------ 141 (238)
T COG0528 80 TVMNALALQDALERLGVDTRVQSAIAMPQVA---------EPYSRREAIRHLEKGRVVIFGGG---TGNPGFTT------ 141 (238)
T ss_pred HHHHHHHHHHHHHHCCCCCEECCCCCCCCCC---------CCCCHHHHHHHHHCCCEEEEECC---CCCCCCCH------
T ss_conf 9999999999986358761221311176666---------86679999999974998999188---89998734------
Q ss_pred CHHHHHHHHHHCHHHHHHHC-CHHHHEECCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 42899999884734556534-61440245842123441105679999999884031101378876433138526761123
Q gi|254780873|r 154 DTSAVAIAAAIKADRCDIYT-DVCGIYTTDPRIEPKAHLMKKISFEEMLEMSSLGAKVMQVRSVELAMLYKMCLFVRSSF 232 (411)
Q Consensus 154 D~tA~~ia~~l~A~~~~i~t-dV~Gi~taDPr~v~~a~~i~~lsy~Ea~eLa~~Gakvlhp~~~~~~~~~~ipi~i~ntf 232 (411)
T Consensus 142 Dt~AALrA~ei~ad~ll~atn~VDGVY~~DPkk~pdA~~~~~Lty~e~l~~~---l~vmD~tA~~l~~~~~i~i~Vfn~~ 218 (238)
T COG0528 142 DTAAALRAEEIEADVLLKATNKVDGVYDADPKKDPDAKKYDTLTYDEVLKIG---LKVMDPTAFSLARDNGIPIIVFNIN 218 (238)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCEECCCCCCCCCCEECCCCCHHHHHHHC---CEEECHHHHHHHHHCCCCEEEEECC
T ss_conf 7999999998388689984067780368999889882232237999999724---6240599999999759948999378
Q ss_pred CCCC-----CCCCCCCCCC
Q ss_conf 7777-----7654354545
Q gi|254780873|r 233 EDHG-----QQEQLGTLIC 246 (411)
Q Consensus 233 ~~~~-----~~~~~GT~I~ 246 (411)
T Consensus 219 ~~~~l~~~~~ge~~GT~V~ 237 (238)
T COG0528 219 KPGNLKRALKGEEVGTIVE 237 (238)
T ss_pred CCCCHHHHHCCCCCCEEEC
T ss_conf 8765999974896741706