HHsearch alignment for GI: 254780873 and conserved domain: COG1608
>COG1608 Predicted archaeal kinase [General function prediction only].
Probab=99.28 E-value=1.3e-10 Score=91.34 Aligned_cols=219 Identities=24% Similarity=0.313 Sum_probs=138.3
Q ss_pred CCEEEEEECCCCCCC--------HHHHHHHHHHHHHHHHCCCCEEEEEEC--CCCHHHHHHHHHHHHHC--CC---C---
Q ss_conf 966999608584588--------899999999999999679988999806--87304899999998614--89---9---
Q gi|254780873|r 1 MARIVMKFGGTSVAN--------IDCIRSAALHVKREVDRGQEVAMVVSA--MSGETDRLAELCRQVTS--ID---N--- 62 (411)
Q Consensus 1 M~~iV~KfGGtSv~~--------~~~i~~v~~~i~~~~~~g~~~ivVvSA--~~g~Td~L~~l~~~~~~--~~---~--- 62 (411)
T Consensus 1 M~-~IlKlGGSvITdK~~p~t~r~~~l~ria~eI~~--~~~~~livVHGgGSFGHp------~Ak~~~~~~~~~~~s~~G 71 (252)
T COG1608 1 MV-IILKLGGSVITDKDKPRTVREDRLRRIAREISN--GKPEKLIVVHGGGSFGHP------AAKEFGLEGLKNYLSPLG 71 (252)
T ss_pred CE-EEEEECCEEEECCCCCCHHHHHHHHHHHHHHHC--CCCCCEEEEECCCCCCCH------HHHHHCCCCCCCCCCCCC
T ss_conf 91-899955616525887321118999999999845--995438999458665678------899707654446667434
Q ss_pred -HH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCC
Q ss_conf -88-9999998312999999999998439986356733245512133552000123621003343106805860343335
Q gi|254780873|r 63 -AR-ERDVVISTGEQVSSGLMVLALQSLGIQAISLQGWQIPIMTDSLHGMARICRVDEKKIVTHLKKKQVVVITGFQGLS 140 (411)
Q Consensus 63 -~~-~~d~i~s~GE~~s~~l~a~~l~~~G~~a~~l~~~~~~i~t~~~~~~a~~~~~~~~~l~~~l~~~~v~v~~Gf~g~~ 140 (411)
T Consensus 72 ~~~~~~am-----~~L~~-~V~~~l~~~Gv~av~~~P~s~~------~~~gr~~~~~l~~i~~~l~~gfvPvl~GDVv~d 139 (252)
T COG1608 72 FSLTHLAM-----LELNS-IVVDALLDAGVRAVSVVPISFS------TFNGRILYTYLEAIKDALEKGFVPVLYGDVVPD 139 (252)
T ss_pred HHHHHHHH-----HHHHH-HHHHHHHHCCCCCCCCCCCCEE------ECCCCEEECHHHHHHHHHHCCCEEEEECCEEEC
T ss_conf 39999999-----99999-9999998669853222686403------317703220299999998769876233346874
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHCCHHHHEECCCCCCCCCCEECCCCHHHHHHHHH-----CCC--CCHHH
Q ss_conf 56842443068624289999988473455653461440245842123441105679999999884-----031--10137
Q gi|254780873|r 141 HDNSVTTLGRGGSDTSAVAIAAAIKADRCDIYTDVCGIYTTDPRIEPKAHLMKKISFEEMLEMSS-----LGA--KVMQV 213 (411)
Q Consensus 141 ~~g~~ttlgRGGSD~tA~~ia~~l~A~~~~i~tdV~Gi~taDPr~v~~a~~i~~lsy~Ea~eLa~-----~Ga--kvlhp 213 (411)
T Consensus 140 ~~~g~~IiS-G--DdIv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l~~i~~~~~~~gs~~~DVTGGi~~Kl--- 213 (252)
T COG1608 140 DDNGYEIIS-G--DDIVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLLSEIEGRVALGGSGGTDVTGGIAKKL--- 213 (252)
T ss_pred CCCCEEEEE-C--CHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH---
T ss_conf 898548985-1--1899999997498779998457823568987486620001443234306867621313399999---
Q ss_pred HHHHHHHHCCCEEEEECCCCCCC-----CCCCCCCCCC
Q ss_conf 88764331385267611237777-----7654354545
Q gi|254780873|r 214 RSVELAMLYKMCLFVRSSFEDHG-----QQEQLGTLIC 246 (411)
Q Consensus 214 ~~~~~~~~~~ipi~i~ntf~~~~-----~~~~~GT~I~ 246 (411)
T Consensus 214 ~~~~~~~~~~~~vyi~ng~~~~ni~~~l~G~~vGT~I~ 251 (252)
T COG1608 214 EALLEIARYGKEVYIFNGNKPENIYRALRGENVGTRID 251 (252)
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCEEEC
T ss_conf 99999873586389987877778999965887754846