HHsearch alignment for GI: 254780873 and conserved domain: PRK08961

Probab=98.05  E-value=7.6e-05  Score=52.51  Aligned_cols=105  Identities=19%  Similarity=0.308  Sum_probs=77.2

Q ss_pred             HHHHHHHCCCCEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCCCCCCHHH
Q ss_conf             01455412850111234432222333101212302477668878988860596158974891699996678667855799
Q gi|254780873|r  284 IFSPLAEAHINIDMIIQNVSEDGQYVDITFTTPSSSLEKALAVLSDNKENIGYDVIQHEDNLVKISAIGIGMQSYAGVAS  363 (411)
Q Consensus       284 If~~La~~~I~VdmI~qs~s~~~~~~~Isf~i~~~d~~~~~~~L~~~~~~~~~~~I~~~~~~a~ISvVG~gm~~~~Giaa  363 (411)
T Consensus       276 Ti~Pa~~~~IPv~VknT~~Pe~~G-T~I~~~~-----~~----------~~~~~aia~r~~~tll~i~s~~M~~~~GFla  339 (865)
T PRK08961        276 SIKPCRDAGVPMAILDTERPDLSG-TSIDGNA-----EP----------VPGVKAISRRNGIVLVSMEGIGMWQQVGFLA  339 (865)
T ss_pred             HHHHHHHCCCCEEEECCCCCCCCC-CEEECCC-----CC----------CCCEEEEEEECCCEEEEECCCCHHHHCCHHH
T ss_conf             679999769967981789989997-2784898-----77----------7552799982693899964601121136599


Q ss_pred             HHHHHHHHCCCEEEEEEECCCEEEEEEC-------HHHHHHHHHHHHH
Q ss_conf             9999998679829999707848999970-------8899999999998
Q gi|254780873|r  364 AFFLCLAEKGINIKAITTSEIKISVLID-------SAYTELAVRSLHS  404 (411)
Q Consensus       364 kif~aL~~~~InI~~issSe~~IS~VV~-------~~d~~~Av~~LH~  404 (411)
T Consensus       340 ~vF~i~~~~~isvDli~TSEvsvs~tld~~~~~~~~~~~~~l~~~l~~  387 (865)
T PRK08961        340 DVFTLFKKHGLSVDLIGSAETNVTVSLDPSENLVNTDVLAALSDDLSQ  387 (865)
T ss_pred             HHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf             999999983995489960246899996686454677999999999985