HHsearch alignment for GI: 254780873 and conserved domain: cd04234
>cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;). AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd
Probab=100.00 E-value=0 Score=549.09 Aligned_cols=226 Identities=47% Similarity=0.674 Sum_probs=214.0
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 69996085845888999999999999996799889998068730489999999861489988999999831299999999
Q gi|254780873|r 3 RIVMKFGGTSVANIDCIRSAALHVKREVDRGQEVAMVVSAMSGETDRLAELCRQVTSIDNARERDVVISTGEQVSSGLMV 82 (411)
Q Consensus 3 ~iV~KfGGtSv~~~~~i~~v~~~i~~~~~~g~~~ivVvSA~~g~Td~L~~l~~~~~~~~~~~~~d~i~s~GE~~s~~l~a 82 (411)
T Consensus 1 ~~V~KFGGtSv~~~~~i~~v~~ii~~~-~~~~~~vVVvSA~~g~Td~L~~~a-------------~ils~GE~lSa~lla 66 (227)
T cd04234 1 MVVQKFGGTSVASAERIKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIELA-------------LLLSFGERLSARLLA 66 (227)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHH-HCCCCEEEEECCCCCCHHHHHHHH-------------HHHHHHHHHHHHHHH
T ss_conf 989967830179999999999999865-438988999738843289999999-------------999299999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-CCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHH
Q ss_conf 999843998635673324551213355200012362100334310-6805860343335568424430686242899999
Q gi|254780873|r 83 LALQSLGIQAISLQGWQIPIMTDSLHGMARICRVDEKKIVTHLKK-KQVVVITGFQGLSHDNSVTTLGRGGSDTSAVAIA 161 (411)
Q Consensus 83 ~~l~~~G~~a~~l~~~~~~i~t~~~~~~a~~~~~~~~~l~~~l~~-~~v~v~~Gf~g~~~~g~~ttlgRGGSD~tA~~ia 161 (411)
T Consensus 67 ~~L~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~Vv~GF~g~~~~G~~tTLGRGGSD~TA~~lA 146 (227)
T cd04234 67 AALRDRGIKARSLDARQAGITTDDNHGAARIIEISYERLKELLAEIGKVPVVTGFIGRNEDGEITTLGRGGSDYSAAALA 146 (227)
T ss_pred HHHHHCCCCEEEECHHHCEEECCCCCCCEEEHHHCHHHHHHHHHHCCCEEEECCEEEECCCCCEEEECCCCHHHHHHHHH
T ss_conf 99997899719964157206416876520645428999999997389679962604540588468838885678999999
Q ss_pred HHHCHHHHHHHCCHHHHEECCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
Q ss_conf 88473455653461440245842123441105679999999884031101378876433138526761123777776543
Q gi|254780873|r 162 AAIKADRCDIYTDVCGIYTTDPRIEPKAHLMKKISFEEMLEMSSLGAKVMQVRSVELAMLYKMCLFVRSSFEDHGQQEQL 241 (411)
Q Consensus 162 ~~l~A~~~~i~tdV~Gi~taDPr~v~~a~~i~~lsy~Ea~eLa~~Gakvlhp~~~~~~~~~~ipi~i~ntf~~~~~~~~~ 241 (411)
T Consensus 147 ~~l~A~~~~I~TDVdGi~taDPr~v~~A~~i~~lsy~Ea~ela~~GakVlHp~ti~pa~~~~Ipi~i~nt~~p----~~~ 222 (227)
T cd04234 147 AALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAYFGAKVLHPRAVEPARKANIPIRVKNTFNP----EAP 222 (227)
T ss_pred HHHCCHHHEEEECCCEEECCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCC----CCC
T ss_conf 9818602222126870472799747886240441999999999779741699999999986983999289999----999
Q ss_pred CCCCC
Q ss_conf 54545
Q gi|254780873|r 242 GTLIC 246 (411)
Q Consensus 242 GT~I~ 246 (411)
T Consensus 223 GT~Is 227 (227)
T cd04234 223 GTLIT 227 (227)
T ss_pred CEEEC
T ss_conf 81769