HHsearch alignment for GI: 254780873 and conserved domain: cd04234

>cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;). AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd
Probab=100.00  E-value=0  Score=549.09  Aligned_cols=226  Identities=47%  Similarity=0.674  Sum_probs=214.0

Q ss_pred             EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             69996085845888999999999999996799889998068730489999999861489988999999831299999999
Q gi|254780873|r    3 RIVMKFGGTSVANIDCIRSAALHVKREVDRGQEVAMVVSAMSGETDRLAELCRQVTSIDNARERDVVISTGEQVSSGLMV   82 (411)
Q Consensus         3 ~iV~KfGGtSv~~~~~i~~v~~~i~~~~~~g~~~ivVvSA~~g~Td~L~~l~~~~~~~~~~~~~d~i~s~GE~~s~~l~a   82 (411)
T Consensus         1 ~~V~KFGGtSv~~~~~i~~v~~ii~~~-~~~~~~vVVvSA~~g~Td~L~~~a-------------~ils~GE~lSa~lla   66 (227)
T cd04234           1 MVVQKFGGTSVASAERIKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIELA-------------LLLSFGERLSARLLA   66 (227)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHH-HCCCCEEEEECCCCCCHHHHHHHH-------------HHHHHHHHHHHHHHH
T ss_conf             989967830179999999999999865-438988999738843289999999-------------999299999999999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-CCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHH
Q ss_conf             999843998635673324551213355200012362100334310-6805860343335568424430686242899999
Q gi|254780873|r   83 LALQSLGIQAISLQGWQIPIMTDSLHGMARICRVDEKKIVTHLKK-KQVVVITGFQGLSHDNSVTTLGRGGSDTSAVAIA  161 (411)
Q Consensus        83 ~~l~~~G~~a~~l~~~~~~i~t~~~~~~a~~~~~~~~~l~~~l~~-~~v~v~~Gf~g~~~~g~~ttlgRGGSD~tA~~ia  161 (411)
T Consensus        67 ~~L~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~Vv~GF~g~~~~G~~tTLGRGGSD~TA~~lA  146 (227)
T cd04234          67 AALRDRGIKARSLDARQAGITTDDNHGAARIIEISYERLKELLAEIGKVPVVTGFIGRNEDGEITTLGRGGSDYSAAALA  146 (227)
T ss_pred             HHHHHCCCCEEEECHHHCEEECCCCCCCEEEHHHCHHHHHHHHHHCCCEEEECCEEEECCCCCEEEECCCCHHHHHHHHH
T ss_conf             99997899719964157206416876520645428999999997389679962604540588468838885678999999


Q ss_pred             HHHCHHHHHHHCCHHHHEECCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
Q ss_conf             88473455653461440245842123441105679999999884031101378876433138526761123777776543
Q gi|254780873|r  162 AAIKADRCDIYTDVCGIYTTDPRIEPKAHLMKKISFEEMLEMSSLGAKVMQVRSVELAMLYKMCLFVRSSFEDHGQQEQL  241 (411)
Q Consensus       162 ~~l~A~~~~i~tdV~Gi~taDPr~v~~a~~i~~lsy~Ea~eLa~~Gakvlhp~~~~~~~~~~ipi~i~ntf~~~~~~~~~  241 (411)
T Consensus       147 ~~l~A~~~~I~TDVdGi~taDPr~v~~A~~i~~lsy~Ea~ela~~GakVlHp~ti~pa~~~~Ipi~i~nt~~p----~~~  222 (227)
T cd04234         147 AALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAYFGAKVLHPRAVEPARKANIPIRVKNTFNP----EAP  222 (227)
T ss_pred             HHHCCHHHEEEECCCEEECCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCC----CCC
T ss_conf             9818602222126870472799747886240441999999999779741699999999986983999289999----999


Q ss_pred             CCCCC
Q ss_conf             54545
Q gi|254780873|r  242 GTLIC  246 (411)
Q Consensus       242 GT~I~  246 (411)
T Consensus       223 GT~Is  227 (227)
T cd04234         223 GTLIT  227 (227)
T ss_pred             CEEEC
T ss_conf             81769