HHsearch alignment for GI: 254780873 and conserved domain: cd04246
>cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati
Probab=100.00 E-value=0 Score=572.01 Aligned_cols=239 Identities=57% Similarity=0.871 Sum_probs=232.4
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 69996085845888999999999999996799889998068730489999999861489988999999831299999999
Q gi|254780873|r 3 RIVMKFGGTSVANIDCIRSAALHVKREVDRGQEVAMVVSAMSGETDRLAELCRQVTSIDNARERDVVISTGEQVSSGLMV 82 (411)
Q Consensus 3 ~iV~KfGGtSv~~~~~i~~v~~~i~~~~~~g~~~ivVvSA~~g~Td~L~~l~~~~~~~~~~~~~d~i~s~GE~~s~~l~a 82 (411)
T Consensus 1 ~iV~KFGGtSv~~~e~i~~va~iI~~~~~~g~~viVVvSA~gg~Td~L~~l~~~~~~~~~~~~~d~ils~GE~ls~~lla 80 (239)
T cd04246 1 IIVQKFGGTSVADIERIKRVAERIKKAVKKGYQVVVVVSAMGGTTDELIGLAKEVSPRPSPRELDMLLSTGEQISAALLA 80 (239)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98998781004999999999999999986798299998489865677999888764772588999999988999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHH
Q ss_conf 99984399863567332455121335520001236210033431068058603433355684244306862428999998
Q gi|254780873|r 83 LALQSLGIQAISLQGWQIPIMTDSLHGMARICRVDEKKIVTHLKKKQVVVITGFQGLSHDNSVTTLGRGGSDTSAVAIAA 162 (411)
Q Consensus 83 ~~l~~~G~~a~~l~~~~~~i~t~~~~~~a~~~~~~~~~l~~~l~~~~v~v~~Gf~g~~~~g~~ttlgRGGSD~tA~~ia~ 162 (411)
T Consensus 81 ~~L~~~G~~a~~~~~~~~~i~t~~~~~~a~i~~~~~~~~~~~l~~~~v~Vv~GF~g~~~~G~~ttLGRGGSD~tAa~iA~ 160 (239)
T cd04246 81 MALNRLGIKAISLTGWQAGILTDDHHGNARIIDIDPKRILEALEEGDVVVVAGFQGVNEDGEITTLGRGGSDTTAVALAA 160 (239)
T ss_pred HHHHHCCCCCEEEEHHHCCEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHH
T ss_conf 99997599808857323625304641022233530556665552454479733234489985688179964799999999
Q ss_pred HHCHHHHHHHCCHHHHEECCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
Q ss_conf 84734556534614402458421234411056799999998840311013788764331385267611237777765435
Q gi|254780873|r 163 AIKADRCDIYTDVCGIYTTDPRIEPKAHLMKKISFEEMLEMSSLGAKVMQVRSVELAMLYKMCLFVRSSFEDHGQQEQLG 242 (411)
Q Consensus 163 ~l~A~~~~i~tdV~Gi~taDPr~v~~a~~i~~lsy~Ea~eLa~~Gakvlhp~~~~~~~~~~ipi~i~ntf~~~~~~~~~G 242 (411)
T Consensus 161 ~l~A~~v~iwTDVdGi~taDPr~v~~A~~i~~lsy~EA~ela~~GakVlhp~ti~p~~~~~Ipi~I~nt~~~~-----~G 235 (239)
T cd04246 161 ALKADRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLEMASLGAKVLHPRSVELAKKYNVPLRVRSSFSEN-----PG 235 (239)
T ss_pred HHCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCC-----CC
T ss_conf 7288889997189725738999687665727527999999986898425899999999869958998489898-----98
Q ss_pred CCCC
Q ss_conf 4545
Q gi|254780873|r 243 TLIC 246 (411)
Q Consensus 243 T~I~ 246 (411)
T Consensus 236 T~Is 239 (239)
T cd04246 236 TLIT 239 (239)
T ss_pred CEEC
T ss_conf 7759