HHsearch alignment for GI: 254780874 and conserved domain: PRK05589
>PRK05589 peptide chain release factor 2; Provisional.
Probab=100.00 E-value=0 Score=900.30 Aligned_cols=318 Identities=33% Similarity=0.514 Sum_probs=292.0
Q ss_pred HCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 538531579---99999999879999999999999999899999997203785356654332223320005778889998
Q gi|254780874|r 23 MSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINY 99 (357)
Q Consensus 23 Lsdp~~w~d---~~klsKe~s~L~~iv~~~~~~~~~~~ei~el~eLl~e~e~D~El~elAeeEl~~l~~~l~~le~eL~~ 99 (357)
T Consensus 1 m~dPd~W~D~~~a~~l~kE~~~l~~~v~~~~~l~~~~~dl~~l~el~ee--ed~~~~~e~~~e~~~l~~~l~~----le~ 74 (325)
T PRK05589 1 MQEPNFWNDIKKAQEITSEEKYLKDKIDKYNSLRNRIEDIEVLKEMMEE--EDEESAKEIISEVKNIKEEIDN----FKI 74 (325)
T ss_pred CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHH----HHH
T ss_conf 9893032099999999999999999999999999999999999998738--9999999999999999999999----999
Q ss_pred HHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEEEECCCHHHHHHCC
Q ss_conf 64000113554037886226885217889999999999998764984001321135447721113777503111210002
Q gi|254780874|r 100 LLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFE 179 (357)
Q Consensus 100 ~LLpsde~D~~nailEI~aGaGG~EA~dwA~~L~rMY~r~ae~~gwk~eii~~~~ge~aGik~v~~~I~G~~aYg~Lk~E 179 (357)
T Consensus 75 ~~Ll~~~~D~~naileIrAGaGG~EA~dwA~~L~RMY~r~Ae~~gwk~evid~~~ge~gGiK~v~~~I~G~~ayg~Lk~E 154 (325)
T PRK05589 75 ETLLSGEYDRNNAILTLHSGVGGTDAQDWTEMLLRMYTRWAEKKGYKVEIIDLLEGDEAGIKSVTLKITGEFAYGYLKAE 154 (325)
T ss_pred HHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEECCHHHHHHHCC
T ss_conf 84579988789858999658897799999999999999999875995010431765457810038998551256554215
Q ss_pred CCCEEEEEECCCCCCCCCCEEEEEEEEEECC-CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEE-EE
Q ss_conf 4650267612545678511016888853033-433222454347999852888752000632121588964984488-84
Q gi|254780874|r 180 SGVHRVQRVPATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TS 257 (357)
Q Consensus 180 ~GvHRvqRip~~es~gR~hTS~a~V~V~P~~-~~~~~~i~~~dl~i~~~rssG~GGQ~vN~t~savri~H~ptgi~v-~~ 257 (357)
T Consensus 155 ~GvHRvqRip~~es~gR~hTS~a~V~VlP~~~~~~~i~i~~~dl~id~~rssG~GGQ~VNkt~sAVRitH~PTGi~v~cq 234 (325)
T PRK05589 155 KGIHRLVRISPFNANGKRQTSFASVEVLPELTDDQDIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQ 234 (325)
T ss_pred CCCCEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCEEEEEC
T ss_conf 77511464488777885487757889945766654477773564289887899987877761204899970586499965
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCC-CCCCEEEEECCCEECCHHHHHCCCH
Q ss_conf 365413589999999999999999999999998744652246742382210448-9981124321644178778728866
Q gi|254780874|r 258 SEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF-SQGRITDHRINLTLYKLEYVLQGYI 336 (357)
Q Consensus 258 ~eRsQ~~Nk~~A~~~L~~~l~~~~~~~~~~~~~~~r~~~~g~~~rs~~iRtY~~-~~~rv~DhR~~~~~~~~~~~l~G~l 336 (357)
T Consensus 235 ~eRSQ~~Nk~~A~~~L~arL~~~~~~~~~~~~~~~-~~~~~~~~~g~~iRtY~~~p~~~V~DhR~g~~~~~l~~vl~Gdl 313 (325)
T PRK05589 235 NERSQHSNKDTAMKMLKSKLVELKERAHKEKIEDL-TGELKDMGWGSQIRSYVFHPYNLVKDHRTGVETSNVDSVMDGDI 313 (325)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCCH
T ss_conf 85648999999999999999999999999999998-60645677424631027789983741166970277477658773
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780874|r 337 DDIINPLLTAH 347 (357)
Q Consensus 337 ~~~i~~~~~~~ 347 (357)
T Consensus 314 d~fI~a~l~~~ 324 (325)
T PRK05589 314 DIFITQYLKGN 324 (325)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999722