HHsearch alignment of GI: 254780874 and MMDB domain: 1gqe_A_121-231_315-365
>1gqe_A (A:121-231,A:315-365) Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli}
Probab=100.00 E-value=0 Score=444.11 Aligned_cols=161 Identities=32% Similarity=0.511 Sum_probs=154.7
Q ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCCCCEE
Q ss_conf 11355403788622688521788999999999999876498400132113544772111377750311121000246502
Q gi|254780874|r 105 DTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184 (357)
Q Consensus 105 de~D~~nailEI~aGaGG~EA~dwA~~L~rMY~r~ae~~gwk~eii~~~~ge~aGik~v~~~I~G~~aYg~Lk~E~GvHR 184 (357)
||+|++||+|||+||+||+||++||+|||+||.+||+++||++++++.++|+.+|+|||++.|+|++||++||+|+||||
T Consensus 1 g~~D~~~~ileI~aG~GG~Ea~~fa~~Ll~mY~~~a~~~g~~~evi~~~~~~~~G~ksv~~~i~G~~ay~~lk~E~GvHr 80 (162)
T 1gqe_A 1 GEYDSADCYLDIQAGSGGTEAQDWASXLERXYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHR 80 (162)
T ss_dssp STTTTSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSSSSEEEEEEEEESTTHHHHHGGGCEEEE
T ss_pred CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCEE
T ss_conf 96555671599970797699999999999999999998698799867777653555236763147654321110466135
Q ss_pred EEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHH
Q ss_conf 67612545678511016888853033433222454347999852888752000632121588964984488843654135
Q gi|254780874|r 185 VQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQ 264 (357)
Q Consensus 185 vqRip~~es~gR~hTS~a~V~V~P~~~~~~~~i~~~dl~i~~~rssG~GGQ~vN~t~savri~H~ptgi~v~~~eRsQ~~ 264 (357)
|||+|||+++||||||||+|+|+|++++.+.
T Consensus 81 v~r~s~~~~~~rr~Ts~a~V~VlP~~~e~~~------------------------------------------------- 111 (162)
T 1gqe_A 81 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDID------------------------------------------------- 111 (162)
T ss_dssp EEEECTTSSSCCEEEEEEEEEEEECCBTTBC-------------------------------------------------
T ss_pred EEECCCCCCCCCEEEEEEEEEEECCCCCCCC-------------------------------------------------
T ss_conf 6644898888847876667888568887653-------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEECCCEECCHHHHHCCCHHHHHHHHH
Q ss_conf 89999999999999999999999998744652246742382210448998112432164417877872886699999999
Q gi|254780874|r 265 NRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLL 344 (357)
Q Consensus 265 Nk~~A~~~L~~~l~~~~~~~~~~~~~~~r~~~~g~~~rs~~iRtY~~~~~rv~DhR~~~~~~~~~~~l~G~l~~~i~~~~ 344 (357)
+..+||+||||||||||||||||||++++|+++||+|+||+||++++
T Consensus 112 ---------------------------------~~~~~~~~iRtY~~~~~rv~DhR~~~~~~~~~~vl~G~l~~~i~~~~ 158 (162)
T 1gqe_A 112 ---------------------------------SDIGWGSQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASL 158 (162)
T ss_dssp ---------------------------------CCCCSCSEEEEEEGGGTEEEETTTCCEESCHHHHHTTCCHHHHHHHH
T ss_pred ---------------------------------HCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHCCCHHHHHHHHH
T ss_conf ---------------------------------12535487656658998152005697457757875877599999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780874|r 345 TAH 347 (357)
Q Consensus 345 ~~~ 347 (357)
.|+
T Consensus 159 ~~~ 161 (162)
T 1gqe_A 159 KAG 161 (162)
T ss_dssp HTT
T ss_pred HCC
T ss_conf 776