HHsearch alignment of GI: 254780874 and MMDB domain: 1j26_A_

>1j26_A (A:) Immature colon carcinoma transcript 1; peptide chain release factors, RF-1, the GGQ motif, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=99.85  E-value=1.1e-21  Score=176.67  Aligned_cols=81  Identities=23%  Similarity=0.373  Sum_probs=72.2

Q ss_pred             EEEEEEECC-CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE-------------------------CCCCEEE
Q ss_conf             888853033-43322245434799985288875200063212158896-------------------------4984488
Q gi|254780874|r  202 ATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITH-------------------------IPTGIMV  255 (357)
Q Consensus       202 a~V~V~P~~-~~~~~~i~~~dl~i~~~rssG~GGQ~vN~t~savri~H-------------------------~ptgi~v  255 (357)
                      |+|.++|.. +..++.|+++||+|.|+|||||||||||||+|+|+|+|                         .|+||+|
T Consensus         1 a~~~~~~~~~~~~~~~Ip~~~l~~~~~RssGpGGQ~VNK~~skv~l~~~~~~~~~l~~~~~~~l~~~~~~r~~~~~~l~i   80 (112)
T 1j26_A            1 GSSGSSGEHAKQASSYIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKNKINKAGELVL   80 (112)
T ss_dssp             CCCCSCSSCCCSSCCCCCTTTSEEEEECCCCSSSSCCSSCCCEEEEEEEGGGCTTSCHHHHHHHHHHTTTTBCSSSEEEE
T ss_pred             CCCCCCHHHHHHHCCCCCHHHEEEEEEECCCCCCCCCCCCCCCEEEEECHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf             98886501133404704878937998876799998444303030589762323579999999999986373666983999


Q ss_pred             E-ECCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8-43654135899999999999999999
Q gi|254780874|r  256 T-SSEKSQHQNRLRAMKVLRARLYDVER  282 (357)
Q Consensus       256 ~-~~eRsQ~~Nk~~A~~~L~~~l~~~~~  282 (357)
                      . +.+|||++||+.|+++|++.|++...
T Consensus        81 ~~~~~RsQ~~N~~~a~~kL~~~l~~a~~  108 (112)
T 1j26_A           81 TSESSRYQFRNLAECLQKIRDMIAEASG  108 (112)
T ss_dssp             EECCCSSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EECCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9887679999999999999999999748