HHsearch alignment of GI: 254780874 and MMDB domain: 2b3t_B_84-214_295-336
>2b3t_B (B:84-214,B:295-336) RF-1, peptide chain release factor 1; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli}
Probab=100.00 E-value=0 Score=508.46 Aligned_cols=172 Identities=62% Similarity=1.074 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEE
Q ss_conf 20005778889998640001135540378862268852178899999999999987649840013211354477211137
Q gi|254780874|r 86 IEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVA 165 (357)
Q Consensus 86 l~~~l~~le~eL~~~LLpsde~D~~nailEI~aGaGG~EA~dwA~~L~rMY~r~ae~~gwk~eii~~~~ge~aGik~v~~ 165 (357)
++.+++.++++|+.+|+|++|+|.+||+|||+||+||+||||||+||||||.+||+++||++++++.++++.||||+|++
T Consensus 2 ~~~~~~~l~~~l~~~ll~~~~~D~~~a~leI~aG~GG~EA~~fa~~L~~MY~~~a~~~g~k~ev~~~~~~~~~G~k~~~~ 81 (173)
T 2b3t_B 2 AKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIA 81 (173)
T ss_dssp ----------CCCCCCCSCCSGGGSCEEEEEEECSSSHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECTTSSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEE
T ss_conf 66545589999999862344355455489996267767899999999999999998749851002225656777148999
Q ss_pred EEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEE
Q ss_conf 77503111210002465026761254567851101688885303343322245434799985288875200063212158
Q gi|254780874|r 166 TISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245 (357)
Q Consensus 166 ~I~G~~aYg~Lk~E~GvHRvqRip~~es~gR~hTS~a~V~V~P~~~~~~~~i~~~dl~i~~~rssG~GGQ~vN~t~savr 245 (357)
.|+|++|||+||+|+|||||||||||+++||+|||||+|+|+|+++|+++
T Consensus 82 ~I~G~~aY~~Lk~E~GvHRvqRvp~te~~gR~hTStasV~VlP~~~d~~~------------------------------ 131 (173)
T 2b3t_B 82 KISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAEL------------------------------ 131 (173)
T ss_dssp EECSSSCHHHHGGGCEEEEEEECCTTCSSCCCEEEEEEEECCBCCCTTTC------------------------------
T ss_pred EEECCCCCCEEEEEECCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCC------------------------------
T ss_conf 99767744234664123389972476434530202456621001332123------------------------------
Q ss_pred EEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEECCCEE
Q ss_conf 89649844888436541358999999999999999999999999874465224674238221044899811243216441
Q gi|254780874|r 246 ITHIPTGIMVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTL 325 (357)
Q Consensus 246 i~H~ptgi~v~~~eRsQ~~Nk~~A~~~L~~~l~~~~~~~~~~~~~~~r~~~~g~~~rs~~iRtY~~~~~rv~DhR~~~~~ 325 (357)
|+||||||||||||||||||+||||||+|+++
T Consensus 132 ------------------------------------------------k~qvgs~dRsekIRTYNf~q~rvtDHRi~~~~ 163 (173)
T 2b3t_B 132 ------------------------------------------------RNLLGSGDRSDRNRTYNFPQGRVTDHRINLTL 163 (173)
T ss_dssp ------------------------------------------------CC-------CCEEEEEETTTTEEEEGGGTEEE
T ss_pred ------------------------------------------------HHHCCCCCCCCCEEEEECCCCCCCEECCCCEE
T ss_conf ------------------------------------------------60041001438547661698862100458867
Q ss_pred CCHHHHHCCC
Q ss_conf 7877872886
Q gi|254780874|r 326 YKLEYVLQGY 335 (357)
Q Consensus 326 ~~~~~~l~G~ 335 (357)
++|+.||+|+
T Consensus 164 ~~l~~~l~Ge 173 (173)
T 2b3t_B 164 YRLDEVMEGK 173 (173)
T ss_dssp SCHHHHHHTC
T ss_pred CCHHHHHCCC
T ss_conf 7844764987