HHsearch alignment of GI: 254780874 and MMDB domain: 2ihr_1_111-220_304-365
>2ihr_1 (1:111-220,1:304-365) Peptide chain release factor 2; mixed alpha-beta, translation; 2.50A {Thermus thermophilus} PDB: 2b9m_Y* 3f1e_X 3f1g_X 2jl5_Y 2jl7_Y 2wh1_Y 2wh3_Y
Probab=100.00 E-value=0 Score=447.45 Aligned_cols=168 Identities=33% Similarity=0.506 Sum_probs=161.5
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCCCCEEEE
Q ss_conf 35540378862268852178899999999999987649840013211354477211137775031112100024650267
Q gi|254780874|r 107 DDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186 (357)
Q Consensus 107 ~D~~nailEI~aGaGG~EA~dwA~~L~rMY~r~ae~~gwk~eii~~~~ge~aGik~v~~~I~G~~aYg~Lk~E~GvHRvq 186 (357)
||.++|+|||+||+||+||++||+|||+||.+||+++||++++++.++|+.+|||+|++.|+|++||++||+|+||||||
T Consensus 1 ~D~~~~ileI~aG~GG~Ea~~fa~~L~~mY~~~a~~~g~~~evi~~~~~~~~G~ksa~l~i~G~~ay~~lk~E~GvHrvq 80 (172)
T 2ihr_1 1 HAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLSPEAGVHRLV 80 (172)
T ss_dssp STTSEEEEEEEECSSTHHHHHHHHHHHHHHHHHHHTTTCEEEEEEEEECSSSSEEEEEEEEESTTHHHHHGGGCEEEEEE
T ss_pred CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEECCEEEE
T ss_conf 34554279998358713689999999999999998669848885202666678631577744744201246772216899
Q ss_pred EECCCCCCCCCCEEEEEEEEEECCCC-CCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHH
Q ss_conf 61254567851101688885303343-32224543479998528887520006321215889649844888436541358
Q gi|254780874|r 187 RVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMVTSSEKSQHQN 265 (357)
Q Consensus 187 Rip~~es~gR~hTS~a~V~V~P~~~~-~~~~i~~~dl~i~~~rssG~GGQ~vN~t~savri~H~ptgi~v~~~eRsQ~~N 265 (357)
|+|||+++||||||||+|+|+|++++ +++
T Consensus 81 R~s~~~~~~rrhTs~~~V~VlP~~~~~~~i-------------------------------------------------- 110 (172)
T 2ihr_1 81 RPSPFDASGRRHTSFAGVEVIPEVDEEVEV-------------------------------------------------- 110 (172)
T ss_dssp EECTTSSSCCEEEEEEEEEEEEECCSSSSC--------------------------------------------------
T ss_pred EECCCCCCCCEEEEEEEEEEECCCCHHHHC--------------------------------------------------
T ss_conf 722556655224567899995442200222--------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEECCCEECCHHHHHCCCHHHHHHHHHH
Q ss_conf 99999999999999999999999987446522467423822104489981124321644178778728866999999999
Q gi|254780874|r 266 RLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLT 345 (357)
Q Consensus 266 k~~A~~~L~~~l~~~~~~~~~~~~~~~r~~~~g~~~rs~~iRtY~~~~~rv~DhR~~~~~~~~~~~l~G~l~~~i~~~~~ 345 (357)
..+||+|||||||||+||||||||++++|+++||+|+||+||++++.
T Consensus 111 ---------------------------------~~~rs~~IRtYn~p~~rvtDhR~~~~~~~l~~vl~G~l~~~i~a~~~ 157 (172)
T 2ihr_1 111 ---------------------------------PIEWGSQIRSYVLDKNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLE 157 (172)
T ss_dssp ---------------------------------CSCCCSCSEEEEGGGTEEEETTTCCEESCHHHHTTTCCHHHHHHHHH
T ss_pred ---------------------------------CCCCCCCCCCEECCCCCCCEECCCCEECCHHHHHCCCHHHHHHHHHH
T ss_conf ---------------------------------77767880154679883210033976678688768870999999999
Q ss_pred HHHHHHHHHHCC
Q ss_conf 999999874059
Q gi|254780874|r 346 AHQAKMIGSASE 357 (357)
Q Consensus 346 ~~~~~~l~~~~e 357 (357)
|+++++|.++.+
T Consensus 158 ~~~~~~~~~~~~ 169 (172)
T 2ihr_1 158 WKAGRRQGTEEV 169 (172)
T ss_dssp HHHTTC------
T ss_pred HHHHHHHHHHHH
T ss_conf 999998743443