PSIBLAST alignment of GI: 254780874 and protein with PDB id: 2b3t
>gi|88192214|pdb|2B3T|B Chain B, Molecular Basis For Bacterial Class 1 Release Factor Methylation By Prmc Length = 360
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 171/355 (48%), Positives = 252/355 (70%), Gaps = 9/355 (2%)
Query: 8 QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHT 64
++ L R E++ + ++ ++ + L+ EYA +S + + + Q +++ +
Sbjct: 8 KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQM 67
Query: 65 VIGDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSE 124
++ D E+R++AQ E+ +++ +LE ++ LLLPKD DD+++ LE+RAGTGG E
Sbjct: 68 ML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDE 123
Query: 125 AALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHR 184
AALF GDLFRMY RYA R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HR
Sbjct: 124 AALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHR 183
Query: 185 VQRVPATEASGRVHTSAATVAVLPEAAEID-VDIPLEDIRIDTMRASGSGGQHVNTTDSA 243
VQRVPATE+ GR+HTSA TVAV+PE + + D+ D+RIDT R+SG+GGQHVNTTDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDTFRSSGAGGQHVNTTDSA 243
Query: 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDR 302
+RITH+PTGI+V E+SQH+N+ +A+ VL AR++ E + ++ R+ +GSGDR
Sbjct: 244 IRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR 303
Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
S+R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++ HQA + + SE
Sbjct: 304 SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358